BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 042857
         (1404 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359472760|ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score = 1951 bits (5053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 993/1393 (71%), Positives = 1141/1393 (81%), Gaps = 23/1393 (1%)

Query: 1    MKDNSSSTSTMINRNWVLKRKRRKLPCGPGLSNGKEENLVTSESPRNTPSAKRRLKNEIN 60
            MK+N S TS MINRNWVLKRKRRKLPCGP LSNGKE   + SES  NT SAKRRLK E +
Sbjct: 1    MKENGSMTSKMINRNWVLKRKRRKLPCGPDLSNGKEGTSIASESTGNTSSAKRRLKGEAS 60

Query: 61   ADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
            +DRS+ KKKGNDGYY+ECVICDLGGNLLCCDSCPRTYHLQCL+PPLKRIPNGKWQCPKC 
Sbjct: 61   SDRSALKKKGNDGYYFECVICDLGGNLLCCDSCPRTYHLQCLNPPLKRIPNGKWQCPKCC 120

Query: 121  QKNDQLKPISNLDSISKRARSKIITIKSQSGVKSSGADKVSQIFGNSILARKRSN-KGKS 179
            QK+D L+P+S+LDSISKRAR+KI++ KS+S +KSSG +KVS+IFG+SIL +KRS  K KS
Sbjct: 121  QKSDSLEPMSHLDSISKRARTKIVSAKSKSEIKSSGTEKVSRIFGSSILGKKRSAVKAKS 180

Query: 180  VLALGVKSLEKSLDSSQVDVSCSTKPENTSAGVPVEGSSSCPNDDDEKQLNASPTDSLAD 239
             ++  V S+EK LDSSQ+DVS S KP + S G  +EGSSS    D+EK+ + +PT +  D
Sbjct: 181  AISRKVCSIEKKLDSSQIDVSSSPKPSHPSVGGSIEGSSSSVFVDNEKKPDLTPTGTPTD 240

Query: 240  -TKFHPAEEVLPHSQVTKSEQNDEVPVEKHEKSSTNGSSGIKFVLAIGASERD-RKRKPE 297
             T    A+EVLP S+ T  E NDE    K + S  NG+SG K + A+ A+ R  RKRK +
Sbjct: 241  RTSNSAAKEVLPLSRDTALEPNDEASGRKPDLSCDNGTSGNKLIHAMDAATRKARKRKHK 300

Query: 298  VKDEDSQKKLRVDKRKRSASASKKRRSKIGTLSPGTSKLHEKQRTNNDEVSASLCEVDVG 357
            V  +DSQKK R DK K +A+ SKK  SK  ++SP TS+ H K+RT +  VSA L + DVG
Sbjct: 301  VNSDDSQKKSRTDKGKHAANTSKKSGSKANSMSPETSRSHRKRRTADKGVSAGLSKEDVG 360

Query: 358  TKGLDAQRKDE-LAEETTDPLDKSDKAGVHVNEIPLCKDIVPFELQQVDRVLGCRVKGDD 416
             K  D Q+K+E L  E T+P     +AG +++E   C++ V  ELQQVDRVLGCRV+GD+
Sbjct: 361  IKSSDVQKKNEKLPVEGTNPSHDVVEAGGNMDETVTCEENVTGELQQVDRVLGCRVQGDN 420

Query: 417  TSSSCHISATATDDRHSDDFLVSENHNKILEENLACDTDLDAEVTENLAELSPNVIRSSD 476
            T+SSCHIS T   D  SD+ L+ EN N+  EE L+ D DLD E  E L E    +    +
Sbjct: 421  TNSSCHISVTVPTDLPSDNVLIPENQNRSPEEILSGDVDLDGETAEKLHEGCQGMTNCFE 480

Query: 477  -EECMKNDIGVDRIQVYRRSVTKECKVTKECKGENAIDLLREDDKDSDPVAVNGKVQDES 535
             E+ +KND+ VD+I VYRRS TKEC+        NA++  R   K S   A++GK QD+S
Sbjct: 481  GEKNIKNDVRVDKINVYRRSATKECREG------NAMNTERRCAKSS--TAIDGKDQDQS 532

Query: 536  AVSTEDLGER-NDKMVVEDA-DVSLR---DNEGLTVSEIHITCESTDKDVDVGKKTSGSV 590
            AV+TE+L ++  +KMV+ED+ +V+LR   ++E   + E  ++ E+ D D D   K  G  
Sbjct: 533  AVTTENLRKQPTEKMVIEDSTNVTLRSHENDESPKICETPVSHENKDTDADTEMKMGGGA 592

Query: 591  AKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYG 650
               VQ+  + ESA   G+ VSYEFLVKWVGKS+IHNSWI ESQLK+LAKRKLENYKAKYG
Sbjct: 593  ENTVQDATLAESASFDGEMVSYEFLVKWVGKSHIHNSWISESQLKLLAKRKLENYKAKYG 652

Query: 651  TTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTD 710
              VINIC+E+WKQPQRVI+LR+SKDGT EAFVKW GLPYDECTWE+LDEP +EK SHL D
Sbjct: 653  MAVINICEEQWKQPQRVIALRASKDGTTEAFVKWNGLPYDECTWERLDEPVVEKSSHLID 712

Query: 711  LFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKC 770
             + QFE++TL+KDA++D+LPRGKGD  QS+IV L EQP+ELKGG+LFPHQLEALNWLRKC
Sbjct: 713  AYNQFEKETLEKDAAKDDLPRGKGDGHQSDIVTLAEQPKELKGGSLFPHQLEALNWLRKC 772

Query: 771  WHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPN 830
            WHKSKNVILADEMGLGKTVSACAF+SSLY EFKA LPCLVLVPLSTMPNWLAEF+LWAPN
Sbjct: 773  WHKSKNVILADEMGLGKTVSACAFLSSLYFEFKATLPCLVLVPLSTMPNWLAEFSLWAPN 832

Query: 831  LNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPW 890
            LNVVEYHGCAKARAIIRQ+EWH +DP+  NKKT+SYKFNVLLTTYEM+LADSSHLRGVPW
Sbjct: 833  LNVVEYHGCAKARAIIRQHEWHGTDPNGSNKKTASYKFNVLLTTYEMVLADSSHLRGVPW 892

Query: 891  EVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSL 950
            EVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA+FPSL
Sbjct: 893  EVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPATFPSL 952

Query: 951  SSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYR 1010
             SFEEKFNDLTT +KVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYR
Sbjct: 953  FSFEEKFNDLTTAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYR 1012

Query: 1011 AMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKAS 1070
            AMLTKNYQ+LRN+GKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGS EFLHEMRIKAS
Sbjct: 1013 AMLTKNYQLLRNMGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSGEFLHEMRIKAS 1072

Query: 1071 AKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQA 1130
            AKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL  EFGP+T+ERVDGSVSV DRQA
Sbjct: 1073 AKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLTTEFGPRTFERVDGSVSVADRQA 1132

Query: 1131 AITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKR 1190
            AI RFNQDK+RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS R
Sbjct: 1133 AIARFNQDKTRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNR 1192

Query: 1191 LLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFNDSPGING 1250
            LLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFNDS  + G
Sbjct: 1193 LLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFNDSSSVTG 1252

Query: 1251 KDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQ 1310
            KD GEN+ + ++ + D+E K +++ GGLGDVY+DKCT+GSTKIVWDENAI +LLDR+NLQ
Sbjct: 1253 KDAGENSCNKDDVIPDVEHKSKRKAGGLGDVYKDKCTDGSTKIVWDENAIMKLLDRTNLQ 1312

Query: 1311 SGSTDLAEGDLENDMLGSVKATEWNEETTEDQA--ESPVAAVDDASAENSERKEENAVTG 1368
            S S   AE DLENDMLGSVK+ EWN+E T++Q   E P    DD SA+NSERKE+N V G
Sbjct: 1313 SSSP--AEADLENDMLGSVKSLEWNDEPTDEQGGTELPPVVTDDVSAQNSERKEDNLV-G 1369

Query: 1369 IEENEWDRLLRVR 1381
             EENEWD+LLR+R
Sbjct: 1370 TEENEWDKLLRIR 1382


>gi|224125208|ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
 gi|222871157|gb|EEF08288.1| chromatin remodeling complex subunit [Populus trichocarpa]
          Length = 2332

 Score = 1905 bits (4936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 983/1390 (70%), Positives = 1130/1390 (81%), Gaps = 34/1390 (2%)

Query: 11   MINRNWVLKRKRRKLPCGPGLSNGKEENLVTSESPRNTPSAKRRLKNEINADRSSTKKKG 70
            MI+RNWVLKRKR+K+  G  +S GKE+NL   ESPRNT +AKRR K+E ++D SS+KKKG
Sbjct: 1    MISRNWVLKRKRKKILYGRVVSTGKEDNL---ESPRNTSAAKRRPKSEQSSDLSSSKKKG 57

Query: 71   NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPIS 130
            NDGYYYECVICDLGGNLLCCDSCPR YHLQCLDPPLKRIP GKWQCPKC+QK+D LK IS
Sbjct: 58   NDGYYYECVICDLGGNLLCCDSCPRVYHLQCLDPPLKRIPMGKWQCPKCSQKSDPLKSIS 117

Query: 131  NLDSISKRARSKIITIKSQSGVKSSGADKVSQIFGNSILARKRSN-KGKSVLALGVKSLE 189
             L SISKRAR+KIIT  S++G KSSG DKVS +FG+SI++++RS+ KGKS L +G K +E
Sbjct: 118  PLGSISKRARTKIITTNSRTGFKSSGTDKVSALFGSSIVSKRRSSSKGKSTLTVGSKPIE 177

Query: 190  KSLDSSQVDVSCSTKPENTSAGVPVEGSSSCPNDDDEKQLNASPTDSLADTK-FHPAEEV 248
            K  DSS  DV CSTK  + SA   V+G+S   N DDEK+ +ASP +S A  K    A+E+
Sbjct: 178  KEPDSSS-DVLCSTKSCDPSAVSSVDGTSLHVNIDDEKKCDASPKESTAGKKTISLADEL 236

Query: 249  LPHSQVTKSEQNDEVPVEKHEKSSTNGSSGIKFVLAIGASERDRKRKPEVKDEDSQKKLR 308
              HS++T+S+ N+E   EKH  +  NGS   K VLAIGA+  +RKRK E    DS KK R
Sbjct: 237  FSHSKLTESKPNNEGSGEKHVLACDNGSPRKKIVLAIGAASENRKRKLEGNSVDSVKKPR 296

Query: 309  VDKRKRSASASKKRRSKIGTLSPGTSKLHEKQRTNNDEVSASLCEVDVGTKGLDAQRKDE 368
             +K KR+   S K R K    S GTSKL++K++T N EVS  L   DV  K ++ Q+KDE
Sbjct: 297  TNKGKRT---SIKYRPKANNASSGTSKLNQKRKTINHEVSLLLPTEDVEVKNIELQKKDE 353

Query: 369  LAE-ETTDPLDKSDKAGVHVNEIPLCKDIVPFELQQ------VDRVLGCRVKGDDTSSSC 421
                E   PL++S KA VHV+E   C+DIV  ELQQ      VDRVLGCR++G++ S SC
Sbjct: 354  KNPVEVAQPLEESYKAEVHVDETQKCEDIVMTELQQNISTLQVDRVLGCRIEGENASLSC 413

Query: 422  HISATATDDRHSDDFLVSENHNKILEENLACDTDLDAEVTENLAELSPNVIRSSD-EECM 480
              S  + +DR SD+ L+SE  N  LEE  A DT  D  V EN  E  P VI SS+ +E +
Sbjct: 414  CTSLISKNDRPSDELLISETENGHLEEKAAGDTYSDLGVAENHVEGHPGVIESSEKDESV 473

Query: 481  KNDIGVDRIQVYRRSVTKECKVTKECKGENAIDLLREDDKDSDPVAVNGKVQDESAVSTE 540
            KNDI VD I+VYRRS +K+ K      G N+ DLL +D KDS    ++GK QDESAV+TE
Sbjct: 474  KNDIRVDTIRVYRRSASKDYK------GGNSKDLLGKDGKDSGSGGISGKDQDESAVTTE 527

Query: 541  DLGERNDKMVVEDA-DVSLRDNEGLTVSEI---HITCESTD-KDVDVGKKTSGSVAKRVQ 595
             + +R++  V+E+  D  L++++   +SE+   H++ E+ D K+ D+  KTS S   +V 
Sbjct: 528  VMVKRHENPVIEETTDFCLKNSDADQISEVCEMHVSPETKDTKEEDMKIKTS-SCENKVP 586

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVIN 655
            EPA+ E A       SYEFLVKWVG+S+IHNSWI ESQLK LAKRKLENYKAKYGT +IN
Sbjct: 587  EPAMEELACAHKDTTSYEFLVKWVGRSHIHNSWISESQLKALAKRKLENYKAKYGTALIN 646

Query: 656  ICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQF 715
            IC+E+WKQPQRVI+LR+S+DG+REAFVKWTGLPYDECTWE LD+P L+K  HL + F QF
Sbjct: 647  ICEEKWKQPQRVIALRASEDGSREAFVKWTGLPYDECTWESLDDPVLKKSVHLINQFSQF 706

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSK 775
            ERQTL+KD++ D+L +G+ D  Q+EI  L EQPEELKGG+LFPHQLEALNWLRKCWHKSK
Sbjct: 707  ERQTLEKDSARDDLQKGRRDGLQNEIATLMEQPEELKGGSLFPHQLEALNWLRKCWHKSK 766

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            NVILADEMGLGKTVSACAF+SSLY EFKA LPCLVLVPLSTMPNW +EFALWAPNLNVVE
Sbjct: 767  NVILADEMGLGKTVSACAFLSSLYFEFKASLPCLVLVPLSTMPNWFSEFALWAPNLNVVE 826

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHGCAKARA+IR YEWHASDP+ +NKKT+SYKFNVLLTTYEM+LADS++LRGVPWEVLVV
Sbjct: 827  YHGCAKARAMIRLYEWHASDPNKMNKKTTSYKFNVLLTTYEMVLADSTYLRGVPWEVLVV 886

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DEGHRLKNSGSKLFSLLN+FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSL+SFEE
Sbjct: 887  DEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLTSFEE 946

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
            KFNDLTT +KVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK
Sbjct: 947  KFNDLTTAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1006

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTL 1075
            NYQ+LRNIGKGVAQQSMLNIVMQLRK+CNHPYLIPGTEPDSGS+EFLHEMRIKASAKLTL
Sbjct: 1007 NYQMLRNIGKGVAQQSMLNIVMQLRKICNHPYLIPGTEPDSGSLEFLHEMRIKASAKLTL 1066

Query: 1076 LHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRF 1135
            LHSMLK+LYKEGHRVLIFSQMTKLLDILEDYL IEFGPKTYERVDGSVSV DRQ AI RF
Sbjct: 1067 LHSMLKILYKEGHRVLIFSQMTKLLDILEDYLTIEFGPKTYERVDGSVSVSDRQTAIARF 1126

Query: 1136 NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
            NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR
Sbjct: 1127 NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1186

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFNDSPGINGKDMGE 1255
            LVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELF++S  +NGKD  +
Sbjct: 1187 LVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFSESSSMNGKDNSD 1246

Query: 1256 NNTS--IEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGS 1313
            NN +   ++ + DLEQK RKR GGLGDVYQDKCT+G  KIVWDENAI++LLDR+NLQS S
Sbjct: 1247 NNINKDKDDTIADLEQKQRKRSGGLGDVYQDKCTDGGNKIVWDENAISKLLDRTNLQSAS 1306

Query: 1314 TDLAEGDLENDMLGSVKATEWNEETTEDQ--AESPVAAVDDASAENSERKEENAVTGIEE 1371
            TD AEGD EN+MLGSVK+ EWN+ETTE+Q  AES +  VDD   +N ERKE+N V   EE
Sbjct: 1307 TDAAEGDFENEMLGSVKSLEWNDETTEEQGGAES-LVVVDDTCGQNPERKEDNVVNVTEE 1365

Query: 1372 NEWDRLLRVR 1381
            NEWDRLLR+R
Sbjct: 1366 NEWDRLLRLR 1375


>gi|224071533|ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
 gi|222840937|gb|EEE78484.1| chromatin remodeling complex subunit [Populus trichocarpa]
          Length = 2327

 Score = 1871 bits (4846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 967/1393 (69%), Positives = 1124/1393 (80%), Gaps = 30/1393 (2%)

Query: 1    MKDNSSSTSTMINRNWVLKRKRRKLPCGPGLSNGKEENLVTSESPRNTPSAKRRLKNEIN 60
            MKDN S++S MI+RNWVLKRKR+K+  G  +S  KE+NL   ESPRNT +AKRR K+E++
Sbjct: 1    MKDNGSTSSKMISRNWVLKRKRKKILYGRVVSTSKEDNL---ESPRNTSAAKRRPKSELS 57

Query: 61   ADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
            +D S++KKKGNDGYYYECVICDLGGNLLCCDSCPR YHLQCLDPPLKRIP GKWQCPKC+
Sbjct: 58   SDLSTSKKKGNDGYYYECVICDLGGNLLCCDSCPRVYHLQCLDPPLKRIPMGKWQCPKCS 117

Query: 121  QKNDQLKPISNLDSISKRARSKIITIKSQSGVKSSGADKVSQIFGNSILARKRSN-KGKS 179
            +K+D LK I+ L SISKRAR+K++T  S++GVKSS ADKVS +FG+SI++++RS+ KGKS
Sbjct: 118  KKSDPLKSINPLGSISKRARTKVVTTNSRTGVKSSVADKVSALFGSSIVSKRRSSCKGKS 177

Query: 180  VLALGVKSLEKSLDSSQVDVSCSTKPENTSAGVPVEGSSSCPNDDDEKQLNASPTDSLAD 239
            VL +G KS+EK  DS  + VS S+KP + SA   V+G+S   N D EK+  ASP +S A 
Sbjct: 178  VLTVGSKSVEKDPDS-LLYVSSSSKPSDPSALGSVDGTSLHVNID-EKKPPASPKESSAG 235

Query: 240  TK-FHPAEEVLPHSQVTKSEQNDEVPVEKHEKSSTNGSSGIKFVLAIGASERDRKRKPEV 298
             K    A+E+L  S++T+SE N+E   EK   S  NGS   K VLAIGA+  +RKRK E 
Sbjct: 236  KKSISLADELLSRSKLTESEPNNECSGEKLVLSCDNGSPRKKIVLAIGATSENRKRKLEG 295

Query: 299  KDEDSQKKLRVDKRKRSASASKKRRSKIGTLSPGTSKLHEKQRTNNDEVSASLCEVDVGT 358
                S KK R +K KR+   SKK RSK  T S GT K ++KQ+  N EVS  L   DV  
Sbjct: 296  CSVVSFKKHRTNKGKRT---SKKHRSKTNTASSGTHKSNQKQKAVNHEVSVFLSAEDVEL 352

Query: 359  KGLDAQRKDELAEETTDPLDKSDKAGVHVNEIPLCKDIVPFELQQVDRVLGCRVKGDDTS 418
            K L+ Q+ ++   E    L++S KA VHV E   C+DI+  ELQQVDRVLGCR++GD+TS
Sbjct: 353  KNLNLQKDEKNPVEVAQTLEESYKAEVHVEETQKCEDIIMTELQQVDRVLGCRIQGDNTS 412

Query: 419  SSCHISATATDDRHSDDFLVSENHNKILEENLACDTDLDAEVTENLAELSPNVIRSSDEE 478
            SSC       +D+ SD+ L+ E  N  LE    CD D DA + EN  E  P++I SS+++
Sbjct: 413  SSCVTFQITKNDQLSDELLIPEFENGHLEVKAVCDVDSDAGIAENHVEGHPDIIESSEKD 472

Query: 479  C-MKNDIGVDRIQVYRRSVTKECKVTKECKGENAIDLLREDDKDSDPVAVNGKVQDESAV 537
              ++NDI VD I+VYRRS +K+CK      G N  DLL +D KDS    ++G  QDESA+
Sbjct: 473  VSVRNDIRVDTIRVYRRSASKDCK------GGNNKDLLGKDGKDSGSGGISGTDQDESAI 526

Query: 538  STEDLGERNDKMVVEDA-DVSLRDNEGLTVSEI---HITCESTDKDVDVGKKTSGSVAKR 593
            +TE   +R++  V+E+  D  L+ +  + +SE+   H++ +  D+  DV  KT G    +
Sbjct: 527  TTEVTAKRHENPVIEETTDFCLKGSR-VQISEVCETHVSSKIKDRKEDVEIKTCGG-ENK 584

Query: 594  VQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTV 653
            V +P + E   V      YEFLVKWVG+S+IHNSWI ESQLKVLAKRKLENYKAKYG TV
Sbjct: 585  VLKPTMEEPICVNKGTTVYEFLVKWVGRSHIHNSWISESQLKVLAKRKLENYKAKYGNTV 644

Query: 654  INICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFV 713
            INIC+E+WKQPQRVI+LR S +G+REAFVKWTGLPYDECTWE +D+P L+K  HL + F 
Sbjct: 645  INICEEKWKQPQRVIALRGS-EGSREAFVKWTGLPYDECTWESVDDPILKKSVHLINQFD 703

Query: 714  QFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHK 773
            Q E + L+KD++ D L +G+ D  Q+EI  L EQPEELKGG+LFPHQLEALNWLRKCWH+
Sbjct: 704  QLEHRALEKDSARDGLRKGRCDGLQNEIATLVEQPEELKGGSLFPHQLEALNWLRKCWHR 763

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
            SKNVILADEMGLGKTVSACAFISSLY E K  LPCLVLVPLSTMPNWL+EFALWAPNLNV
Sbjct: 764  SKNVILADEMGLGKTVSACAFISSLYFELKVSLPCLVLVPLSTMPNWLSEFALWAPNLNV 823

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
            VEYHGCAKARA+IRQYEWHAS+P+ +NKKT+SYKFNVLLTTYEM+LADS++LRGVPWEVL
Sbjct: 824  VEYHGCAKARAMIRQYEWHASNPNEMNKKTTSYKFNVLLTTYEMVLADSTYLRGVPWEVL 883

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
            VVDEGHRLKNSGSKLF+LLN+FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF
Sbjct: 884  VVDEGHRLKNSGSKLFNLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 943

Query: 954  EEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAML 1013
            EEKFNDLTTT+KVEELKKLVAPHMLRRLKKDAMQNIPPKTER+VPVELSSIQAEYYRAML
Sbjct: 944  EEKFNDLTTTEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERIVPVELSSIQAEYYRAML 1003

Query: 1014 TKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKL 1073
            TKNYQ+LRNIGKGVAQQSMLNIVMQLRK+CNHPYLIPGTEPDSGS+EFLHEMRIKASAKL
Sbjct: 1004 TKNYQMLRNIGKGVAQQSMLNIVMQLRKICNHPYLIPGTEPDSGSLEFLHEMRIKASAKL 1063

Query: 1074 TLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAIT 1133
            TLLHSMLK+LYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV DRQ AI 
Sbjct: 1064 TLLHSMLKILYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVSDRQTAIA 1123

Query: 1134 RFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            RFNQDKSRFVFLLSTRSCGLGINLA+ADTVIIYDSDFNPH+DIQAMNRAHRIGQSKRLLV
Sbjct: 1124 RFNQDKSRFVFLLSTRSCGLGINLASADTVIIYDSDFNPHSDIQAMNRAHRIGQSKRLLV 1183

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFNDSPGINGKDM 1253
            YRLVVRASVEERILQLA+KKL+LDQLFVNKSGSQKEVEDILRWGTEELF+DS  +NGKD 
Sbjct: 1184 YRLVVRASVEERILQLARKKLVLDQLFVNKSGSQKEVEDILRWGTEELFSDSSSMNGKDN 1243

Query: 1254 GENNTS--IEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQS 1311
             ENN +   ++A+ DLEQK RKRGGGLGDVYQDKCT+   KIVWDENAI++LLDRSNLQ 
Sbjct: 1244 SENNINKDKDDAIADLEQKQRKRGGGLGDVYQDKCTDCGNKIVWDENAISKLLDRSNLQF 1303

Query: 1312 GSTDLAEGDLENDMLGSVKAT-EWNEETTEDQ--AESPVAAVDDASAENSERKEENAVTG 1368
             +TD AEGD ENDMLGSVK + EWN+ETTE+Q  AESPV  VDD   +N ERKEEN +  
Sbjct: 1304 ATTDAAEGDFENDMLGSVKQSLEWNDETTEEQGGAESPV-VVDDTCGQNPERKEENVINV 1362

Query: 1369 IEENEWDRLLRVR 1381
             EE+EWDRLLRVR
Sbjct: 1363 TEESEWDRLLRVR 1375


>gi|255565329|ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis]
 gi|223537108|gb|EEF38742.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis]
          Length = 2257

 Score = 1846 bits (4781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 949/1392 (68%), Positives = 1079/1392 (77%), Gaps = 105/1392 (7%)

Query: 1    MKDNSSSTSTMINRNWVLKRKRRKLPCGPGLSNGKEENLVTSESPRNTPSAKRRLKNEIN 60
            MKDN S+TS MINRNWVLKRKR+K+  G  L+NGKEE L   ESPRN  +AKRR K E+ 
Sbjct: 1    MKDNGSTTSKMINRNWVLKRKRKKILYGRVLANGKEEKLAPLESPRNASAAKRRSKCELG 60

Query: 61   ADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
            +D SS+KKKGNDGYYYECVICDLGGNLLCCDSCPR YHLQCLDPPLKRIP GKWQCPKC 
Sbjct: 61   SDLSSSKKKGNDGYYYECVICDLGGNLLCCDSCPRVYHLQCLDPPLKRIPMGKWQCPKCY 120

Query: 121  QKNDQLKPISNLDSISKRARSKIITIKSQSGVKSSGADKVSQIFGNSILARKRSN-KGKS 179
            QK+D LK I+ LDSISKRAR+KII+   ++GV+S   +KVS++FG+SIL+++RS+ KGKS
Sbjct: 121  QKSDPLKSITQLDSISKRARTKIISTNPKTGVRSCDTEKVSRLFGSSILSKRRSSSKGKS 180

Query: 180  VLALGVKSLEKSLDSSQVDVSCSTKPENTSAGVPVEGSSSCPNDDDEKQLNASPT-DSLA 238
            VL LGVKS EK   SS +DVS + KP +   G  +E +SSC +DDD K+  ASP  DS  
Sbjct: 181  VLTLGVKSDEKETASS-LDVSSNIKPNHQFLGGSIEATSSCVHDDDLKKPVASPPPDSPE 239

Query: 239  DTKFHPAEEVLPHSQVTKSEQNDEVPVEKHEKSSTNGSSGIKFVLAIGA-SERDRKRKPE 297
                   EE L +S++TKSE NDE    KH+ S  NGS   K VLAIGA SE+DRKRK E
Sbjct: 240  KKSISLTEETLTYSKLTKSEPNDETSDGKHDSSCNNGSPRKKIVLAIGAVSEKDRKRKHE 299

Query: 298  VKDEDSQKKLRVDKRKRSASASKKRRSKIGTLSPGTSKLHEKQRTNNDEVSASLCEVDVG 357
              +EDS KK R DK K +   SKKRRSK       ++KL +KQ+T N  VSAS  +  V 
Sbjct: 300  GNNEDSVKKQRTDKGKLT---SKKRRSKANITISASNKLQQKQKTVNHGVSASFSKNVVE 356

Query: 358  TKGLDAQRKDELAEETTDPLDKSDKAGVHVNEIPLCKDIVPFELQQVDRVLGCRVKGDDT 417
             K ++ Q K+E                                   VDRVLGCR++GD+ 
Sbjct: 357  VKNIEVQGKNE-----------------------------------VDRVLGCRIQGDNA 381

Query: 418  SSSCHISATATDDRHSDDFLVSENHNKILEENLACDTDLDAEVTENLAELSPNVIRSSDE 477
             SS ++S  ATD    D+ L+ E   +I EEN + D D                      
Sbjct: 382  GSSSNLSLIATDVLPPDELLIPET--QIREENTSYDID---------------------- 417

Query: 478  ECMKNDIGVDRIQVYRRSVTKECKVTKECKGENAIDLLREDDKDSDPVAVNGKVQDESAV 537
                                          G NA DL+ E+D+DS    +NGK  DE  V
Sbjct: 418  -----------------------------SGGNARDLVGEEDRDSGFEGINGKGGDEFQV 448

Query: 538  STEDLGERNDKMVVEDA-DVSLRD---NEGLTVSEIHITCES-TDKDVDVGKKTSGSVAK 592
            + ED  ++ +K++ E+  D+ L+     E   VSE+H++ E+   K+ D+  K S  V  
Sbjct: 449  TIEDSIKQPEKVLTEEKFDICLKSQDIGELSKVSELHLSPETRVSKEADMEIKIS-CVQN 507

Query: 593  RVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTT 652
            +VQEP +  SA      ++YEFLVKWVGKS+IHNSWI ESQLKVLAKRKL+NYKAKYGT 
Sbjct: 508  KVQEPTMIGSA-CANSDLTYEFLVKWVGKSHIHNSWISESQLKVLAKRKLDNYKAKYGTA 566

Query: 653  VINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLF 712
            VINIC+++WKQPQRVI++R+S+DGT+EAFVKWTGLPYDECTWE+LDEP + K SHL DLF
Sbjct: 567  VINICEDKWKQPQRVIAVRASRDGTQEAFVKWTGLPYDECTWERLDEPLMLKSSHLVDLF 626

Query: 713  VQFERQTLKKDA-SEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCW 771
             Q E+QTL+KD+  E  + +G+GD QQ+EI  LTEQP+ELKGG+LFPHQLEALNWLR+CW
Sbjct: 627  DQLEQQTLEKDSRGETPIIKGRGDGQQNEIGTLTEQPKELKGGSLFPHQLEALNWLRRCW 686

Query: 772  HKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNL 831
            HKSKNVILADEMGLGKTVSACAF+SSLY EF+A LPCLVLVPLSTMPNWLAEFALWAPNL
Sbjct: 687  HKSKNVILADEMGLGKTVSACAFLSSLYFEFRASLPCLVLVPLSTMPNWLAEFALWAPNL 746

Query: 832  NVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWE 891
            NVVEYHGCAKARAIIRQYEWHASDP   N+KT+SYKFNVLLTTYEM+LADSSHLRGVPWE
Sbjct: 747  NVVEYHGCAKARAIIRQYEWHASDPKKTNQKTASYKFNVLLTTYEMVLADSSHLRGVPWE 806

Query: 892  VLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLS 951
            VLVVDEGHRLKNSGSKLFSLLN+FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLS
Sbjct: 807  VLVVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLS 866

Query: 952  SFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRA 1011
            SFEEKFNDLTT +KVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL+SIQAEYYRA
Sbjct: 867  SFEEKFNDLTTAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRA 926

Query: 1012 MLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASA 1071
            MLTKNYQILRNIGKGV QQSMLNIVMQLRK+CNHPYLIPGTEPDSGSVEFLHEMRIKASA
Sbjct: 927  MLTKNYQILRNIGKGVPQQSMLNIVMQLRKICNHPYLIPGTEPDSGSVEFLHEMRIKASA 986

Query: 1072 KLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAA 1131
            KLT+LHSMLK LYKEGHRVLIFSQMTKLLD+LEDYL IEFGPKTYERVDGSVSV DRQA+
Sbjct: 987  KLTVLHSMLKALYKEGHRVLIFSQMTKLLDVLEDYLTIEFGPKTYERVDGSVSVSDRQAS 1046

Query: 1132 ITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRL 1191
            I+RFNQDKSRFVFLLSTRSCGLGINLATADTV+IYDSDFNPHADIQAMNRAHRIGQS RL
Sbjct: 1047 ISRFNQDKSRFVFLLSTRSCGLGINLATADTVVIYDSDFNPHADIQAMNRAHRIGQSNRL 1106

Query: 1192 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFNDSPGINGK 1251
            LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELF+D    NGK
Sbjct: 1107 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFSDPSRTNGK 1166

Query: 1252 DMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQS 1311
            D GENN+S +EAV D+EQK RKRGGGLGDVY+DKCT+G   IVWDENAIA+LLDRSNLQ+
Sbjct: 1167 DAGENNSSKDEAVIDIEQKQRKRGGGLGDVYKDKCTDGGNTIVWDENAIAKLLDRSNLQA 1226

Query: 1312 GSTDLAEGDLENDMLGSVKATEWNEETTEDQ--AESPVAAVDDASAENSERKEENAVTGI 1369
            G+ D+AE D ENDMLGSVK+ EWN+ETTE+Q  AESP    D+   +NS+RKE+N VT  
Sbjct: 1227 GTADVAEVDFENDMLGSVKSLEWNDETTEEQVGAESPPVVADEICGQNSDRKEDNVVTIA 1286

Query: 1370 EENEWDRLLRVR 1381
            EENEWDRLLR R
Sbjct: 1287 EENEWDRLLRSR 1298


>gi|356510796|ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
          Length = 2325

 Score = 1805 bits (4674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 936/1388 (67%), Positives = 1084/1388 (78%), Gaps = 34/1388 (2%)

Query: 11   MINRNWVLKRKRRKLP------CGPGLSNGKEENLVTSESPRNTPSAKRRLKNEINADRS 64
            M+NRNWVLKRKRRKLP       G   SNGKEEN +TSES RN  SAKR LK E+  D+ 
Sbjct: 1    MLNRNWVLKRKRRKLPLGLDQSSGKEQSNGKEENSLTSESSRNA-SAKRVLKTEVATDQI 59

Query: 65   STKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
            S+KKKGNDGYYYECVICD+GGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCP C +  D
Sbjct: 60   SSKKKGNDGYYYECVICDVGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPSCFEGKD 119

Query: 125  QLKPISNLDSISKRARSKIITIKSQSGVKSSGADKVSQIFGNSILARKRSNKGKS-VLAL 183
            Q  PI++LD ISKRAR+KI+T KS+  V S   +KV   FG  ++++KRS+     + ++
Sbjct: 120  QRMPINHLDPISKRARTKIVTTKSKDQVSSLNLEKV---FGTKLISKKRSSSKGKPISSM 176

Query: 184  GVKSLEKSLDSSQVDVSCSTKPENTSAGVPVEGSSSCPNDDDEKQLNASPTDSLADTK-F 242
            G     K+L SS  D +CS KP + S   P+EG+SS  N D EK+L+ + T+S  D K  
Sbjct: 177  GANFFGKNLLSSPADETCSNKPIDPSLESPMEGTSSGVNAD-EKKLSLASTESPMDRKST 235

Query: 243  HPAEEVLPHSQVTKSEQNDEVPVEKHEKSSTNGSSGIKFVLAIGAS-ERDRKRKPEVKDE 301
             PA+E  P S++T  E NDE    K + S          VLAI AS E  RKRK +V ++
Sbjct: 236  SPAKEDEPLSKITSLEANDEQLEGKTDLSCNKIPLRKTLVLAIAASGEEVRKRKNKVVND 295

Query: 302  DSQKKLRVDKRKRSASASKKRRSKIGTLSPGTSKLHEKQRTNNDEVSASLCEVDVGTKGL 361
            ++ +K R  ++ +        +SK      G +K+H+KQ++    +SAS+ + DVG K  
Sbjct: 296  NTSQKKRKTEKGKKIVNPSSIKSK-----SGNNKVHKKQKSITHSISASVSKEDVGNKNS 350

Query: 362  DAQRKDE-LAEETTDPLDKSDKAGVHVNEIPLCKDIVPFELQQVDRVLGCRVKGDDTSSS 420
            +AQ+KDE +++   D   + DKA   V++  L +     E  QVDRVLGCR++G++ +SS
Sbjct: 351  NAQQKDEKVSQLMKDTPSEVDKAQSRVDKTLLHEGSAIVESLQVDRVLGCRIQGENANSS 410

Query: 421  CHISATATDDRHSDDFLVSENHNKILEENLACDTDLDAEVTENLAELSPNVIRSSDEECM 480
             H+S     D  S D ++ EN +++L+EN AC  DLD E TEN  +   NV  S +E  +
Sbjct: 411  RHLSLNVVGDSPSGDLVILENQSRLLDENSACANDLDVESTENHIDDRQNVKSSDEEGIL 470

Query: 481  KNDIGVDRIQVYRRSVTKECKVTKECKGENAIDLLREDDKDSDPVAVNGKVQDESAVSTE 540
            KN   V+ I VYRRS+TKE K     KG N +D L +   D  P   +GK QD+SAVS E
Sbjct: 471  KNTDRVEGIHVYRRSITKESK-----KG-NPVDSLSKATDDLGPCDGDGKDQDDSAVSAE 524

Query: 541  DLGERNDKMVVEDA-DVSLRDNEGLTVS---EIHITCESTDKDVDVGKKTSGSVAKRVQE 596
             L +  DK+  E+  +V+LR  +   +    EIH++ E+  K+++  K TSG +  + Q+
Sbjct: 525  QLEKPTDKVETEEIINVALRSEDNSEIPKNCEIHLSLETKQKEMNAEKGTSGCIDDKAQD 584

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINI 656
              V E A   G+ V YEFLVKWVGKS+IHNSWI ESQLKVLAKRKLENYKAKYG T+INI
Sbjct: 585  ANVVECAGPNGEQVFYEFLVKWVGKSHIHNSWISESQLKVLAKRKLENYKAKYGMTIINI 644

Query: 657  CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFE 716
            C+E WKQPQRV++LR+SK GT EAF+KWTGLPYDECTWE LDEP L+  SHL  LF + E
Sbjct: 645  CEEHWKQPQRVLALRTSKHGTSEAFIKWTGLPYDECTWESLDEPVLQISSHLITLFNKLE 704

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKN 776
              TL++D+S++   R   D  Q++I  LTEQPE+LKGG+LFPHQLEALNWLRKCW+KSKN
Sbjct: 705  TLTLERDSSKENSTRKSND-HQNDIFNLTEQPEDLKGGSLFPHQLEALNWLRKCWYKSKN 763

Query: 777  VILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
            VILADEMGLGKTVSACAFISSLY EFK  LPCLVLVPLSTMPNWLAEF LWAPN+NVVEY
Sbjct: 764  VILADEMGLGKTVSACAFISSLYFEFKVSLPCLVLVPLSTMPNWLAEFELWAPNVNVVEY 823

Query: 837  HGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVD 896
            HGCAKARAIIRQYEWHA++P  LNKKT +YKFNVLLTTYEM+LADSSHLRGVPWEVLVVD
Sbjct: 824  HGCAKARAIIRQYEWHANNPSGLNKKTEAYKFNVLLTTYEMVLADSSHLRGVPWEVLVVD 883

Query: 897  EGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEK 956
            EGHRLKNS SKLFSLLN+FSFQHRVLLTGTPLQNN+GEMYNLLNFLQPASFPSLS FEEK
Sbjct: 884  EGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLSLFEEK 943

Query: 957  FNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKN 1016
            FNDLTT +KV+ELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKN
Sbjct: 944  FNDLTTAEKVDELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKN 1003

Query: 1017 YQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLL 1076
            YQ+LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP+SGSVEFLHEMRIKASAKLTLL
Sbjct: 1004 YQVLRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSVEFLHEMRIKASAKLTLL 1063

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
            HSMLK+L+KEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV DRQ+AI RFN
Sbjct: 1064 HSMLKILHKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQSAIARFN 1123

Query: 1137 QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
            QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS RLLVYRL
Sbjct: 1124 QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRL 1183

Query: 1197 VVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFNDSPGINGKDMGE- 1255
            VVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDIL+WGTEELFNDSPG+NGKD  E 
Sbjct: 1184 VVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFNDSPGLNGKDTSEN 1243

Query: 1256 NNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTD 1315
            NN+S +EAV D+E KHRKR GGLGDVY+DKCT+ S+KI+WDENAI +LLDRSNLQ GSTD
Sbjct: 1244 NNSSKDEAVADIEHKHRKRTGGLGDVYKDKCTDSSSKILWDENAILKLLDRSNLQDGSTD 1303

Query: 1316 LAEGDLENDMLGSVKATEWNEETTEDQ--AESPVAAVDDASAENSERKEENAVTGIEENE 1373
             AEGD ENDMLGSVKA EWN+E TE+    ESP    DD   +NSE+KE+NAV G EENE
Sbjct: 1304 NAEGDSENDMLGSVKALEWNDEPTEEHVVGESPPHGTDDVCTQNSEKKEDNAVNGNEENE 1363

Query: 1374 WDRLLRVR 1381
            WD+LLR R
Sbjct: 1364 WDKLLRAR 1371


>gi|307136401|gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis melo subsp. melo]
          Length = 2374

 Score = 1759 bits (4555), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 917/1400 (65%), Positives = 1083/1400 (77%), Gaps = 33/1400 (2%)

Query: 1    MKDNSSSTSTMINRNWVLKRKRRKLPCGPGLSNGKEENLVTSESPRNTPSAKRRLKNEIN 60
            MK++ SS+  +I+RNWV+KRKRRKL     L   +E+     ESPR+   AK ++K+E +
Sbjct: 46   MKEDESSSGKVISRNWVMKRKRRKLSSATDLPGKREDGSFAIESPRSISLAKGKVKSEGH 105

Query: 61   ADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
             D+ S+KKKGNDGY++ECV+CDLGGNLLCCDSCPRTYHLQCL+PPLKRIP GKW CP C 
Sbjct: 106  HDQFSSKKKGNDGYFFECVVCDLGGNLLCCDSCPRTYHLQCLNPPLKRIPMGKWHCPTCN 165

Query: 121  QKND-QLKPISNLDSISKRARSKIITIKSQSGVKSSGADKVSQIFGNSILARKRS-NKGK 178
            QKND  L   S LD+ISKRAR+K+++ K ++G+KSS  +KVS+IFG+SILA+KRS NK K
Sbjct: 166  QKNDLPLDATSYLDTISKRARTKVVSAKCKNGIKSSDTEKVSRIFGSSILAKKRSSNKRK 225

Query: 179  SVLALGVKSLEKSLDSSQVDVSCSTKPENTSAGVPVEGSSSCPNDDDEKQLNASPTDSLA 238
            S+LA  VK+  +   +  +DVSC+ KP +   G  V+ +SS  N DDEK  NASP+ S  
Sbjct: 226  SILAHKVKTFGRKSVTPSIDVSCNAKPSHPLDGNTVKSTSSPVNIDDEKVCNASPSGSQT 285

Query: 239  DTK-FHPAEEVLPHSQVTKSEQNDEVP-----VEKHEK--SSTNGSSGIKFVLAI-GASE 289
            + K   P  EVL  S+  K E  D VP     V ++E   S  N S     VLA+  A +
Sbjct: 286  EEKSVPPVMEVLADSKAEKLEPCDNVPDKNLDVVENEVAISCENASPSKNPVLAVPTAGK 345

Query: 290  RDRKRKPEVKDEDSQKKLRVDKRKRSASASKKRRSKIGTLSPGTSKLHEKQR-TNNDEVS 348
              RKRK ++  +  QKK +  K       SKK R KI T SPG SK   KQ+   ++++ 
Sbjct: 346  ETRKRKKKINKDVGQKKPKTGKATCVTGTSKKLRCKIDTSSPGNSKSVRKQKNVGHEKIP 405

Query: 349  ASLCEVDVGTKGLDAQRKDE-LAEETTDPLDKSDKAGVHVNEIPLCKDIVPFELQQVDRV 407
             S  + + GTK  D + KDE L EE  D L + DK   HV+ +   ++ +  E  QVDRV
Sbjct: 406  TSSLKEEFGTKNSDLEGKDEKLPEEDKDRLVELDKVVGHVDSMLTSENGLDGETLQVDRV 465

Query: 408  LGCRVKGDDTSSSCHISATATDDRHSDDFLVSENHNKILEENLACDTDLDAEVTENLAEL 467
            LGCRV+G+   SS +++    +D H +D L  E   +  + + + D   D   TEN+ + 
Sbjct: 466  LGCRVQGNSRESS-YLTEIVVND-HPNDLLNPEEARETGDRSTSDDV-FDTG-TENVIKD 521

Query: 468  SPNVIRSSD-EECMKNDIGVDRIQVYRRSVTKECKVTKECKGENAIDLLREDDKDSDPVA 526
              NV  SSD EE +KND+ VD+IQVYRRSV KE K  K      A+D+L + + D     
Sbjct: 522  QENVGPSSDMEESLKNDVKVDKIQVYRRSVNKESKKGK------ALDMLSKGNIDCCTST 575

Query: 527  VNGKVQDESAVSTEDLGERNDKMVVE-DADVSLRDNEGLTVSEIHITCESTDKDVDVGKK 585
            +N + +DES+++ ED G   +  + E +  VSLR + G  V ++    E T+   +VG +
Sbjct: 576  LNSENRDESSLTLEDQGRAIENSISEKNIGVSLRSSNGNDVLKVCKKVE-TNNMTEVGTE 634

Query: 586  T--SGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLE 643
               S S+  ++++  + ++A+   +   YEFLVKWVGKS+IHNSWI ES LKVLAKRKLE
Sbjct: 635  VGISSSLDNKIKDSLLPDTARKNAETTYYEFLVKWVGKSHIHNSWISESHLKVLAKRKLE 694

Query: 644  NYKAKYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALE 703
            NYKAKYGT VINIC+++WK PQRVI+LRS KDG +EAF+KW+GLPYDECTWEKLDEP L+
Sbjct: 695  NYKAKYGTLVINICEDKWKHPQRVIALRSCKDGGQEAFIKWSGLPYDECTWEKLDEPVLK 754

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEA 763
            +  HL  LF  FE++T++KD+S +  P+  G+  Q EI  LTEQP+EL+GG+LFPHQLEA
Sbjct: 755  ESPHLIQLFNDFEQKTIEKDSSME--PKKFGE-SQFEIATLTEQPKELQGGSLFPHQLEA 811

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LNWLRKCW+KSKNVILADEMGLGKTVSACAFISSLY EFKA+LPCLVLVPLSTMPNWL+E
Sbjct: 812  LNWLRKCWYKSKNVILADEMGLGKTVSACAFISSLYFEFKARLPCLVLVPLSTMPNWLSE 871

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            FALWAPNLNVVEYHG AKARA IRQYEWHAS+P  LNKKT S+KFNVLLTTYEM+L D+S
Sbjct: 872  FALWAPNLNVVEYHGGAKARAAIRQYEWHASNPSQLNKKTDSFKFNVLLTTYEMVLVDAS 931

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
            +LRGVPWEVLVVDEGHRLKNSGSKLFSLLN+FSFQHRVLLTGTPLQNNIGEMYNLLNFLQ
Sbjct: 932  YLRGVPWEVLVVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 991

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            PASFPSLSSFEEKFNDLTT +KVEELKKLV+PHMLRRLKKDAMQNIPPKTERMVPVELSS
Sbjct: 992  PASFPSLSSFEEKFNDLTTAEKVEELKKLVSPHMLRRLKKDAMQNIPPKTERMVPVELSS 1051

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLH 1063
            IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP+SGSVEFLH
Sbjct: 1052 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSVEFLH 1111

Query: 1064 EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
            EMRIKASAKLTLLHSMLK+L+KEGHRVL+FSQMTKLLDILEDYL IEFGPKTYERVDGSV
Sbjct: 1112 EMRIKASAKLTLLHSMLKILHKEGHRVLLFSQMTKLLDILEDYLTIEFGPKTYERVDGSV 1171

Query: 1124 SVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
            SV DRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH
Sbjct: 1172 SVADRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1231

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFN 1243
            RIGQS RLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDIL+WGTEELF+
Sbjct: 1232 RIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFS 1291

Query: 1244 DSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARL 1303
            DSP   GKD  EN+ S +EA  D+E KH+KR G LGDVY+DKCT+   KIVWDENAI RL
Sbjct: 1292 DSPITGGKDAVENSNSKDEAAIDIEHKHKKRTGSLGDVYKDKCTDSGNKIVWDENAILRL 1351

Query: 1304 LDRSNLQSGSTDLAEGDLENDMLGSVKATEWNEETTEDQ--AESPVAAVDDASAENSERK 1361
            LDRSNLQS +T++AE D ENDMLGSVK+ +WN+E  E+Q  AESP    DD  A+NSERK
Sbjct: 1352 LDRSNLQSDATEIAEADTENDMLGSVKSVDWNDEPAEEQGGAESPTGVTDDICAQNSERK 1411

Query: 1362 EENAVTGIEENEWDRLLRVR 1381
            ++N +TG EENEWDRLLR+R
Sbjct: 1412 DDNGLTGAEENEWDRLLRIR 1431


>gi|449433493|ref|XP_004134532.1| PREDICTED: uncharacterized protein LOC101204186 [Cucumis sativus]
          Length = 2368

 Score = 1758 bits (4553), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 915/1407 (65%), Positives = 1087/1407 (77%), Gaps = 44/1407 (3%)

Query: 1    MKDNSSSTSTMINRNWVLKRKRRKLPCGPGLSNGKEENLVTSESPRNTPSAKRRLKNEIN 60
            MK++ SS+  +I+RNWV+KRKRRKL     LS+ +E+  +  ESPR+   AK ++K+E +
Sbjct: 39   MKEDESSSGKVISRNWVMKRKRRKLSSATDLSSKREDRSLAIESPRSISLAKGKVKSEGH 98

Query: 61   ADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
             D+ S+KKKGNDGY++ECV+CDLGGNLLCCDSCPRTYHLQCL+PPLKRIP GKW CP C 
Sbjct: 99   RDQFSSKKKGNDGYFFECVVCDLGGNLLCCDSCPRTYHLQCLNPPLKRIPMGKWHCPTCN 158

Query: 121  QKND-QLKPISNLDSISKRARSKIITIKSQSGVKSSGADKVSQIFGNSILARKRS-NKGK 178
            QKND  L   S LD+ISKRAR+K+I+ K ++G+KSS  +KVS+IFG+SILA+KRS NK K
Sbjct: 159  QKNDLPLDATSYLDTISKRARTKVISAKCKNGIKSSDTEKVSRIFGSSILAKKRSSNKRK 218

Query: 179  SVLALGVKSLEKSLDSSQVDVSCSTKPENTSAGVPVEGSSSCPNDDDEKQLNASPTDSLA 238
            S+LA  VK+  +   +S +D+SC+ K  +   G  V+ +SS  N DDEK  NASP+ S  
Sbjct: 219  SILAHKVKTFGRKSVTSNIDLSCNAKASHPLDGNTVKRTSSPVNIDDEKVCNASPSGSQT 278

Query: 239  DTKFHPA-EEVLPHSQVTKSEQNDEVPVEKHEK-------SSTNGSSGIKFVLAIGASER 290
            + K  P+  EVL  S+  K E  D+VP +  +        S  N S     VLA+ A+ +
Sbjct: 279  EEKLVPSVMEVLADSKADKLEPCDDVPDKNLDMVENEVVISCENASPSKNPVLAVPAAGK 338

Query: 291  D-RKRKPEVKDEDSQKKLRVDKRKRSASASKKRRSKIGTLSPGTSKLHEKQR-TNNDEVS 348
            + RKRK ++  +  QKK +  K       SKK R KIG  SPG SK   KQ+  +++++ 
Sbjct: 339  ETRKRKKKINKDVGQKKPKTGKATCVTGTSKKLRCKIGASSPGNSKSVRKQKHVSHEKIP 398

Query: 349  ASLCEVDVGTKGLDAQRKDE-LAEETTDPLDKSDKAGVHVNEIPLCKDIVPFELQQVDRV 407
             S  + +VGTK  D + KDE L EE  D L + DK   HV+ +   ++ +  E  QVDRV
Sbjct: 399  TSSLKEEVGTKNSDLEGKDEKLPEEDKDRLVELDKVVGHVDSMLTSENGLDGETLQVDRV 458

Query: 408  LGCRVKGDDTSSSCHISATATDDRHSDDFLVSENHNKILEENL---ACDTDLDAEVTENL 464
            LGCRV+G+   SS +++    +D H  D L  E   + ++ +    ACD       TEN+
Sbjct: 459  LGCRVQGNSRESS-YLTEIVVND-HPGDLLNPEEARETVDRSTSDDACDVG-----TENV 511

Query: 465  AELSPNVIRSSD-EECMKNDIGVDRIQVYRRSVTKECKVTKECKGENAIDLLREDDKDSD 523
             +   NV  SSD EE +KND+ VD+IQVYRRSV KE K  K      A+D+L + + D  
Sbjct: 512  VKDQENVGPSSDMEESLKNDVKVDKIQVYRRSVNKESKKGK------ALDMLSKGNIDCC 565

Query: 524  PVAVNGKVQDESAVSTEDLGERNDKMVVE-DADVSLRDNEG---LTVSEIHITCES---T 576
               +  + +DES++  ED G   +  + E +  +SLR + G   L V E   + E+   T
Sbjct: 566  TSTLTSENRDESSLMLEDQGRSIENSISEKNIGISLRSSNGNDVLKVCEKVGSFETNNMT 625

Query: 577  DKDVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKV 636
            + + +VG   S S+  +V++  + ++A+   +   YEFLVKWVGKS+IHNSWI ES LKV
Sbjct: 626  EVETEVG--ISSSLENKVKDSLLPDTARKNAETTHYEFLVKWVGKSHIHNSWISESHLKV 683

Query: 637  LAKRKLENYKAKYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK 696
            LAKRKLENYKAKYGT VINIC+++WK PQRVI+LRS KDG +EAF+KW+GLPYDECTWEK
Sbjct: 684  LAKRKLENYKAKYGTLVINICEDKWKHPQRVIALRSCKDGGQEAFIKWSGLPYDECTWEK 743

Query: 697  LDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGAL 756
            LDEP L++  HL  LF  FE++T++KD+S +  P+  GD  Q EI  LTEQP+EL+GG+L
Sbjct: 744  LDEPVLKESPHLIQLFSDFEQKTIEKDSSME--PKKFGD-SQFEIATLTEQPKELQGGSL 800

Query: 757  FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLST 816
            FPHQLEALNWLRKCW+KSKNVILADEMGLGKTVSACAFISSLY EFKA+LPCLVLVPLST
Sbjct: 801  FPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFISSLYFEFKARLPCLVLVPLST 860

Query: 817  MPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYE 876
            MPNWL+EF LWAPNLNVVEYHG AKARA IRQYEWHAS P+ LNKKT S+KFNVLLTTYE
Sbjct: 861  MPNWLSEFGLWAPNLNVVEYHGGAKARAAIRQYEWHASKPNQLNKKTDSFKFNVLLTTYE 920

Query: 877  MILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMY 936
            M+L D+S+LRGVPWEVLVVDEGHRLKNSGSKLFSLLN+FSFQHRVLLTGTPLQNNIGEMY
Sbjct: 921  MVLVDASYLRGVPWEVLVVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNIGEMY 980

Query: 937  NLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERM 996
            NLLNFLQPASFPSLSSFEEKFNDLTT +KVEELKKLV+PHMLRRLKKDAMQNIPPKTERM
Sbjct: 981  NLLNFLQPASFPSLSSFEEKFNDLTTAEKVEELKKLVSPHMLRRLKKDAMQNIPPKTERM 1040

Query: 997  VPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS 1056
            VPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP+S
Sbjct: 1041 VPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPES 1100

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
            GS++FLHEMRIKASAKLTLLHSMLK+L+KEGHRVL+FSQMTKLLDILEDYL IEFGPKTY
Sbjct: 1101 GSLDFLHEMRIKASAKLTLLHSMLKILHKEGHRVLLFSQMTKLLDILEDYLTIEFGPKTY 1160

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            ERVDGSVSV DRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI
Sbjct: 1161 ERVDGSVSVADRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1220

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRW 1236
            QAMNRAHRIGQS RLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDIL+W
Sbjct: 1221 QAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKW 1280

Query: 1237 GTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWD 1296
            GTEELF+DSP   GKD  EN+ S +EA  D+E KH+KR G LGDVY+DKCT+   KIVWD
Sbjct: 1281 GTEELFSDSPITGGKDAVENSNSKDEAATDIEHKHKKRTGSLGDVYKDKCTDSGNKIVWD 1340

Query: 1297 ENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEWNEETTEDQA--ESPVAAVDDAS 1354
            ENAI RLLDRSNLQS + ++AE D ENDMLGSVK+ +WN+E  E+Q   ESP    DD  
Sbjct: 1341 ENAILRLLDRSNLQSDANEIAEADTENDMLGSVKSVDWNDEPAEEQGGTESPTGVTDDIC 1400

Query: 1355 AENSERKEENAVTGIEENEWDRLLRVR 1381
            A+NSERK++N +TG EENEWDRLLR+R
Sbjct: 1401 AQNSERKDDNGLTGAEENEWDRLLRIR 1427


>gi|449490665|ref|XP_004158671.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101228553,
            partial [Cucumis sativus]
          Length = 1851

 Score = 1756 bits (4547), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 915/1407 (65%), Positives = 1087/1407 (77%), Gaps = 44/1407 (3%)

Query: 1    MKDNSSSTSTMINRNWVLKRKRRKLPCGPGLSNGKEENLVTSESPRNTPSAKRRLKNEIN 60
            MK++ SS+  +I+RNWV+KRKRRKL     LS+ +E+  +  ESPR+   AK ++K+E +
Sbjct: 39   MKEDESSSGKVISRNWVMKRKRRKLSSATDLSSKREDRSLAIESPRSISLAKGKVKSEGH 98

Query: 61   ADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
             D+ S+KKKGNDGY++ECV+CDLGGNLLCCDSCPRTYHLQCL+PPLKRIP GKW CP C 
Sbjct: 99   RDQFSSKKKGNDGYFFECVVCDLGGNLLCCDSCPRTYHLQCLNPPLKRIPMGKWHCPTCN 158

Query: 121  QKND-QLKPISNLDSISKRARSKIITIKSQSGVKSSGADKVSQIFGNSILARKRS-NKGK 178
            QKND  L   S LD+ISKRAR+K+I+ K ++G+KSS  +KVS+IFG+SILA+KRS NK K
Sbjct: 159  QKNDLPLDATSYLDTISKRARTKVISAKCKNGIKSSDTEKVSRIFGSSILAKKRSSNKRK 218

Query: 179  SVLALGVKSLEKSLDSSQVDVSCSTKPENTSAGVPVEGSSSCPNDDDEKQLNASPTDSLA 238
            S+LA  VK+  +   +S +D+SC+ K  +   G  V+ +SS  N DDEK  NASP+ S  
Sbjct: 219  SILAHKVKTFGRKSVTSNIDLSCNAKASHPLDGNTVKRTSSPVNIDDEKVCNASPSGSQT 278

Query: 239  DTKFHPA-EEVLPHSQVTKSEQNDEVPVEKHEK-------SSTNGSSGIKFVLAIGASER 290
            + K  P+  EVL  S+  K E  D+VP +  +        S  N S     VLA+ A+ +
Sbjct: 279  EEKLVPSVMEVLADSKADKLEPCDDVPDKNLDMVENEVVISCENASPSKNPVLAVPAAGK 338

Query: 291  D-RKRKPEVKDEDSQKKLRVDKRKRSASASKKRRSKIGTLSPGTSKLHEKQR-TNNDEVS 348
            + RKRK ++  +  QKK +  K       SKK R KIG  SPG SK   KQ+  +++++ 
Sbjct: 339  ETRKRKKKINKDVGQKKPKTGKATCVTGTSKKLRCKIGASSPGNSKSVRKQKHVSHEKIP 398

Query: 349  ASLCEVDVGTKGLDAQRKDE-LAEETTDPLDKSDKAGVHVNEIPLCKDIVPFELQQVDRV 407
             S  + +VGTK  D + KDE L EE  D L + DK   HV+ +   ++ +  E  QVDRV
Sbjct: 399  TSSLKEEVGTKNSDLEGKDEKLPEEDKDRLVELDKVVGHVDSMLTSENGLDGETLQVDRV 458

Query: 408  LGCRVKGDDTSSSCHISATATDDRHSDDFLVSENHNKILEENL---ACDTDLDAEVTENL 464
            LGCRV+G+   SS +++    +D H  D L  E   + ++ +    ACD       TEN+
Sbjct: 459  LGCRVQGNSRESS-YLTEIVVND-HPGDLLNPEEARETVDRSTSDDACDVG-----TENV 511

Query: 465  AELSPNVIRSSD-EECMKNDIGVDRIQVYRRSVTKECKVTKECKGENAIDLLREDDKDSD 523
             +   NV  SSD EE +KND+ VD+IQVYRRSV KE K  K      A+D+L + + D  
Sbjct: 512  VKDQENVGPSSDMEESLKNDVKVDKIQVYRRSVNKEXKKGK------ALDMLSKGNIDCC 565

Query: 524  PVAVNGKVQDESAVSTEDLGERNDKMVVE-DADVSLRDNEG---LTVSEIHITCES---T 576
               +  + +DES++  ED G   +  + E +  +SLR + G   L V E   + E+   T
Sbjct: 566  TSTLTSENRDESSLMLEDQGRSIENSISEKNIGISLRSSNGNDVLKVCEKVGSFETNNMT 625

Query: 577  DKDVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKV 636
            + + +VG   S S+  +V++  + ++A+   +   YEFLVKWVGKS+IHNSWI ES LKV
Sbjct: 626  EVETEVG--ISSSLENKVKDSLLPDTARKNAETTHYEFLVKWVGKSHIHNSWISESHLKV 683

Query: 637  LAKRKLENYKAKYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK 696
            LAKRKLENYKAKYGT VINIC+++WK PQRVI+LRS KDG +EAF+KW+GLPYDECTWEK
Sbjct: 684  LAKRKLENYKAKYGTLVINICEDKWKHPQRVIALRSCKDGGQEAFIKWSGLPYDECTWEK 743

Query: 697  LDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGAL 756
            LDEP L++  HL  LF  FE++T++KD+S +  P+  GD  Q EI  LTEQP+EL+GG+L
Sbjct: 744  LDEPVLKESPHLIQLFSDFEQKTIEKDSSME--PKKFGD-SQFEIATLTEQPKELQGGSL 800

Query: 757  FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLST 816
            FPHQLEALNWLRKCW+KSKNVILADEMGLGKTVSACAFISSLY EFKA+LPCLVLVPLST
Sbjct: 801  FPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFISSLYFEFKARLPCLVLVPLST 860

Query: 817  MPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYE 876
            MPNWL+EF LWAPNLNVVEYHG AKARA IRQYEWHAS P+ LNKKT S+KFNVLLTTYE
Sbjct: 861  MPNWLSEFGLWAPNLNVVEYHGGAKARAAIRQYEWHASKPNQLNKKTDSFKFNVLLTTYE 920

Query: 877  MILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMY 936
            M+L D+S+LRGVPWEVLVVDEGHRLKNSGSKLFSLLN+FSFQHRVLLTGTPLQNNIGEMY
Sbjct: 921  MVLVDASYLRGVPWEVLVVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNIGEMY 980

Query: 937  NLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERM 996
            NLLNFLQPASFPSLSSFEEKFNDLTT +KVEELKKLV+PHMLRRLKKDAMQNIPPKTERM
Sbjct: 981  NLLNFLQPASFPSLSSFEEKFNDLTTAEKVEELKKLVSPHMLRRLKKDAMQNIPPKTERM 1040

Query: 997  VPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS 1056
            VPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP+S
Sbjct: 1041 VPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPES 1100

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
            GS++FLHEMRIKASAKLTLLHSMLK+L+KEGHRVL+FSQMTKLLDILEDYL IEFGPKTY
Sbjct: 1101 GSLDFLHEMRIKASAKLTLLHSMLKILHKEGHRVLLFSQMTKLLDILEDYLTIEFGPKTY 1160

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            ERVDGSVSV DRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI
Sbjct: 1161 ERVDGSVSVADRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1220

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRW 1236
            QAMNRAHRIGQS RLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDIL+W
Sbjct: 1221 QAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKW 1280

Query: 1237 GTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWD 1296
            GTEELF+DSP   GKD  EN+ S +EA  D+E KH+KR G LGDVY+DKCT+   KIVWD
Sbjct: 1281 GTEELFSDSPITGGKDAVENSNSKDEAATDIEHKHKKRTGSLGDVYKDKCTDSGNKIVWD 1340

Query: 1297 ENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEWNEETTEDQA--ESPVAAVDDAS 1354
            ENAI RLLDRSNLQS + ++AE D ENDMLGSVK+ +WN+E  E+Q   ESP    DD  
Sbjct: 1341 ENAILRLLDRSNLQSDANEIAEADTENDMLGSVKSVDWNDEPAEEQGGTESPTGVTDDIC 1400

Query: 1355 AENSERKEENAVTGIEENEWDRLLRVR 1381
            A+NSERK++N +TG EENEWDRLLR+R
Sbjct: 1401 AQNSERKDDNGLTGAEENEWDRLLRIR 1427


>gi|357476459|ref|XP_003608515.1| Chromodomain-helicase-DNA-binding protein, partial [Medicago
            truncatula]
 gi|355509570|gb|AES90712.1| Chromodomain-helicase-DNA-binding protein, partial [Medicago
            truncatula]
          Length = 1406

 Score = 1753 bits (4541), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 897/1387 (64%), Positives = 1059/1387 (76%), Gaps = 41/1387 (2%)

Query: 11   MINRNWVLKRKRRKLPCGPGLSNGKE-----ENLVTSESPRNTPSAKRRLKNEINADRSS 65
            M+N+NWVLKRKRRKLP GP  S+GKE     E+   +     + SAKR LK E    + S
Sbjct: 1    MLNKNWVLKRKRRKLPIGPDQSSGKEQSNGKEDNSVASESSRSASAKRMLKTEEGTAQFS 60

Query: 66   TKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
            +KKKG+DGY+YECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIP GKWQCP C ++NDQ
Sbjct: 61   SKKKGHDGYFYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPMGKWQCPSCFEENDQ 120

Query: 126  LKPISNLDSISKRARSKIITIKSQSGVKSSGADKVSQIFGNSILARKRSNKGKSVLALGV 185
            LKP++NLDSIS+RAR+K + +KS++GV     +KVS IFGN  +++KRS K KS+  +G 
Sbjct: 121  LKPLNNLDSISRRARTKTVPVKSKAGVNPVNLEKVSGIFGNKHISKKRSTKAKSISTMGG 180

Query: 186  KSLEKSLDSSQVDVSCSTKPENTSAGVPVEGSSSCPNDDDEKQLNASPTDSLAD-TKFHP 244
            K        S VD +CS KP + S    +EG+S    D DEK LN SPT +  D     P
Sbjct: 181  KFFGMKPVLSPVDATCSDKPMDPSLESCMEGTSCA--DADEKNLNLSPTVAPMDRMSVSP 238

Query: 245  AEEVLPHSQVTKSEQNDEVPVEKHEKSSTNGSSGIKFVLAI--GASERDRKRKPEVKDED 302
             +EVL  S++T  + ND++  EK + S          VLAI  G  E  +++   + D  
Sbjct: 239  DKEVLSPSKITNLDANDDLLEEKPDLSCDKIPFRKTLVLAITVGGEEMGKRKHKVIGDNA 298

Query: 303  SQKKLRVDKRKRSASASKKRRSKIGTLSPGTSKLHEKQRTNNDEVSASLCEVDVGTKGLD 362
            +QKK R +K K+      K +S       G +K+  KQ++   ++S S  + DVG K  D
Sbjct: 299  NQKKRRTEKGKKVVITPIKSKS-------GNNKVQTKQKSKTHKISISASKGDVGKKKSD 351

Query: 363  AQRKDE-LAEETTDPLDKSDKAGVHVNEIPLCKDIVPFELQQVDRVLGCRVKGDDTSSSC 421
            AQ+KD+  ++   D  +  DKAG H+++  + +D    E  QVD+VLGCR++G+DT+S  
Sbjct: 352  AQQKDKKFSQVMKDSSNVLDKAGSHLDDTLMHEDSTIIESLQVDQVLGCRIQGEDTNSIR 411

Query: 422  HISATATDDRHSDDFLVSENHNKILEENLACDTDLDAEVTENLAELSPNVIRSSDEECMK 481
             +S    DD  S D ++SEN  ++ E+N ACD DLD E+ ENL    P  ++SSDE  + 
Sbjct: 412  QLSLKVGDDSPSGDLVMSENQTRLAEDNSACDNDLDGEIAENLVH-DPQNVKSSDEGELH 470

Query: 482  NDIGVDRIQVYRRSVTKECKVTKECKGENAIDLLREDDKDSDPVAVNGKVQDESAVSTED 541
            N   V++I VYRRS+TKE K        N ++ L +   D    A +G  QD+ AVS E 
Sbjct: 471  NTDRVEKIHVYRRSITKESK------NGNLLNSLSKATDDLGSCARDGTDQDDYAVSDEQ 524

Query: 542  LGERNDKMVVED-ADVSLRDNEGLTVS---EIHITCESTDKDVDVGKKTSGSVAKRVQEP 597
            L + NDK+  E+  +V LR +    +    E+H + E+  K+V + K    S   +VQ+ 
Sbjct: 525  LEKENDKLETEENLNVVLRGDGNSKLPNNCEMHDSLETKQKEVVLEKGMGSSGDNKVQDS 584

Query: 598  AVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINIC 657
                     G+ VSYEFLVKWVGKS+IHNSWI ES LKV+AKRKLENYKAKYGT  INIC
Sbjct: 585  I--------GEEVSYEFLVKWVGKSHIHNSWISESHLKVIAKRKLENYKAKYGTATINIC 636

Query: 658  DERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFER 717
            +E+WK P+R++++R+SK GT EAFVKWTG PY+ECTWE LDEP L+  SHL   F  FE 
Sbjct: 637  EEQWKNPERLLAIRTSKQGTSEAFVKWTGKPYNECTWESLDEPVLQNSSHLITRFNMFET 696

Query: 718  QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNV 777
             TL+++AS++   +   D +Q++IV L EQP+EL+GG+LFPHQLEALNWLRKCW+KS+NV
Sbjct: 697  LTLEREASKENSTKKSSD-RQNDIVNLLEQPKELRGGSLFPHQLEALNWLRKCWYKSRNV 755

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+SACAFISSLY EFK   PCLVLVPL TM NWLAEFALWAP++NVV+YH
Sbjct: 756  ILADEMGLGKTISACAFISSLYFEFKVSRPCLVLVPLVTMGNWLAEFALWAPDVNVVQYH 815

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            GCAKARAIIRQYEWHASDP  LNKKT +YKFNVLLT+YEM+LAD SH RGVPWEVL+VDE
Sbjct: 816  GCAKARAIIRQYEWHASDPSGLNKKTEAYKFNVLLTSYEMVLADYSHFRGVPWEVLIVDE 875

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
            GHRLKNS SKLFSLLNS SFQHRVLLTGTPLQNN+GEMYNLLNFLQPASFPSLS+FEE+F
Sbjct: 876  GHRLKNSESKLFSLLNSISFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLSAFEERF 935

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
            NDLT+ +KV+ELKKLV+PHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY
Sbjct: 936  NDLTSAEKVDELKKLVSPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 995

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLH 1077
            QILRNIGKG+AQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLH
Sbjct: 996  QILRNIGKGIAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLH 1055

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
            SMLK+LYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV DRQ AI RFNQ
Sbjct: 1056 SMLKILYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVTDRQTAIARFNQ 1115

Query: 1138 DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLV 1197
            DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS RLLVYRLV
Sbjct: 1116 DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLV 1175

Query: 1198 VRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENN 1257
            VRASVEERILQLAKKKLMLDQLF  KSGSQKEVEDIL+WGTEELFNDS  +NGKD  ENN
Sbjct: 1176 VRASVEERILQLAKKKLMLDQLFKGKSGSQKEVEDILKWGTEELFNDSCALNGKDTSENN 1235

Query: 1258 TS-IEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDL 1316
             S  +EAV ++E KHRKR GGLGDVY+DKCT+ S+KI+WDENAI +LLDRSNLQ  STD+
Sbjct: 1236 NSNKDEAVAEVEHKHRKRTGGLGDVYEDKCTDNSSKIMWDENAILKLLDRSNLQDASTDI 1295

Query: 1317 AEGDLENDMLGSVKATEWNEETTED--QAESPVAAVDDASAENSERKEENAVTGIEENEW 1374
            AEGD ENDMLGS+KA EWN+E TE+  + ESP    DD   +NSE+KE+NAV G EENEW
Sbjct: 1296 AEGDSENDMLGSMKALEWNDEPTEEHVEGESPPHGADDMCTQNSEKKEDNAVIGGEENEW 1355

Query: 1375 DRLLRVR 1381
            DRLLR+R
Sbjct: 1356 DRLLRLR 1362


>gi|297791319|ref|XP_002863544.1| hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297309379|gb|EFH39803.1| hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 2251

 Score = 1575 bits (4077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 848/1412 (60%), Positives = 1030/1412 (72%), Gaps = 91/1412 (6%)

Query: 1    MKDNSSSTSTMINRNWVLKRKRRKLPCGPGLSNGKEENLVTSESPRNTPSAK---RRLKN 57
            MKD   S S MINR+WV+K+KRRKLP    L + K ++ V  +S   T SAK    RLK 
Sbjct: 1    MKD---SGSEMINRDWVMKQKRRKLPSILDLLDQKVDSSVAFDSSEYTSSAKPTKHRLKT 57

Query: 58   EINADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCP 117
            ++  +R+S+K+KGNDG Y+ECVICDLGG+LLCCDSCPRTYH  CL+PPLKRIPNGKW CP
Sbjct: 58   DLTPERNSSKRKGNDGNYFECVICDLGGDLLCCDSCPRTYHTACLNPPLKRIPNGKWICP 117

Query: 118  KCTQKNDQLKPISNLDSISKRARSKIITIKSQSGVKSSGADKVSQIFGNSILARKRSN-K 176
            KC+  ++ LKP++ LD+++KRAR+K     SQ+G K    ++ SQI+ +SI++ ++S+ K
Sbjct: 118  KCSPNSEALKPVNRLDAVAKRARTKTTKRNSQAGPK---CERASQIYCSSIISGEQSSEK 174

Query: 177  GKSVLALGVKSLEKSLDSSQVDVSCSTKPENTSAGVPVEGSSSCPNDDDEKQLNASPTDS 236
            GKS+ A   KS+ K + SS +D  CST  E   A       SS   +DD  +      D 
Sbjct: 175  GKSISAEESKSIGKEVYSSPMD-GCSTA-ELGHASADDRPDSSSHGEDDLGKPVIPTADL 232

Query: 237  LADTKFH-PAEEVLPHSQVTKSEQNDEVPVEKHEKSSTNGSSGIKFVLAIGASERDRKRK 295
             +D     P+ E L  S+++ +E+N E PVEK E +S+                + +KRK
Sbjct: 233  PSDAGLTLPSCEDLSESKLSDTEKNHEAPVEKLEHASSEIVENKTIAEVETGKGKRKKRK 292

Query: 296  PEVKDEDSQKKLRVDKRKRSASASKKRRSKIGTLSPGTSKLHEKQRTNNDEVSASLCEVD 355
             E+ D +S ++ + DK++     +KK  SK+G+ S  + +  +K++  N     SL +  
Sbjct: 293  RELNDGESLERCKTDKKR-----AKKSLSKVGSQSTKSPESSKKKKKKNRVTLKSLSKPQ 347

Query: 356  VGTKGLDAQRKDELAEETTDPLDKSDKAGVHVNEIPLCKDIVPFELQQVDRVLGCRVKGD 415
              T+  +  +K  L +E    L  ++K+  +++E    K  +P    QVDRVLGCR++G 
Sbjct: 348  SKTETPEKVKK--LPKEERRALRATNKSSSYLDE----KSSLPAVNLQVDRVLGCRIQGL 401

Query: 416  DTSSSCHISATATDDRHSDDFLVSENHNKILEENLACDTDLDAEVTENLAELSPNVIRSS 475
              +S C   +  +DD  SD              NL  +   D+ V +  AEL    + + 
Sbjct: 402  TKTSLC---SALSDDLCSD--------------NLQANDQRDSSVRDTNAEL----VVAE 440

Query: 476  DEECMKNDIGVDRIQVYRRSVTKECKVTKECKGENAIDLLREDDKDSDPVAVNGKVQDES 535
            D+    ++ G                  K  KG       R  DKD           DES
Sbjct: 441  DKTESSSETG------------------KSSKGS------RLKDKD----------MDES 466

Query: 536  AVSTEDLGERNDKMVVED-ADVSLR---DNEGLTVSEIHITCEST---DKDVDVGKKTSG 588
            A+ TE + E  ++M  ED +D +L    D+E + VSE  ++ E     +   + G++ + 
Sbjct: 467  ALGTEGMVEVKEEMHSEDNSDAALSRHVDDEDMKVSETPVSVERELLEEAHQETGEQCA- 525

Query: 589  SVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK 648
               + V+EP   +++ + G+ VSYEFLVKWVGKSNIHN+WI E++LK LAKRKLENYK+K
Sbjct: 526  VAGEEVEEPVAAKTSDLIGETVSYEFLVKWVGKSNIHNTWISEAELKGLAKRKLENYKSK 585

Query: 649  YGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
            YGT VINIC+++WKQPQR++++R SK+G +EA+VKWTGL YDECTWE L+EP L+  SHL
Sbjct: 586  YGTAVINICEDKWKQPQRIVAIRVSKEGNQEAYVKWTGLAYDECTWESLEEPILKNSSHL 645

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLR 768
             DLF Q+E++TL++ +S+    R +G+ QQSEIV LTEQP+EL+GGALFPHQLEALNWLR
Sbjct: 646  IDLFHQYEQKTLER-SSKGNPTRERGEGQQSEIVTLTEQPQELRGGALFPHQLEALNWLR 704

Query: 769  KCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWA 828
            +CWHKSKNVILADEMGLGKTVSA AF+SSLY EF    PCLVLVPLSTMPNWL+EF+LWA
Sbjct: 705  RCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLWA 764

Query: 829  PNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGV 888
            P LNVVEYHG AK RAIIR YEW A +P    KK +SYKFNVLLTTYEM+LADSSHLRGV
Sbjct: 765  PLLNVVEYHGSAKGRAIIRDYEWRAKNPTGTTKKPTSYKFNVLLTTYEMVLADSSHLRGV 824

Query: 889  PWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 948
            PWEVLVVDEGHRLKNS SKLFSLLN+FSFQHRVLLTGTPLQNNIGEMYNLLNFLQP SFP
Sbjct: 825  PWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPLSFP 884

Query: 949  SLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEY 1008
            SLSSFEE+F+DLT+ +KVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL+SIQAEY
Sbjct: 885  SLSSFEERFHDLTSAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEY 944

Query: 1009 YRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIK 1068
            YRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP+SGS+EFLH+MRIK
Sbjct: 945  YRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSLEFLHDMRIK 1004

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            ASAKLTLLHSMLKVL KEGHRVLIFSQMTKLLDILEDYLNIEFGPKT+ERVDGSV+V DR
Sbjct: 1005 ASAKLTLLHSMLKVLQKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADR 1064

Query: 1129 QAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 1188
            QAAI RFNQDK+RFVFLLSTR+CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS
Sbjct: 1065 QAAIARFNQDKNRFVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 1124

Query: 1189 KRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFNDSPGI 1248
            KRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKE EDILRWGTEELFNDS G 
Sbjct: 1125 KRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEFEDILRWGTEELFNDSAGE 1184

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
            N KD  E+N ++ + + DLE K RK+GGGLGDVYQDKCTEG+ KIVWDE AI +LLDRSN
Sbjct: 1185 NKKDTAESNGNL-DVIMDLESKSRKKGGGLGDVYQDKCTEGNGKIVWDEIAIMKLLDRSN 1243

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEWNEETTEDQ--AESPVAAVDDASAENSERKEENAV 1366
            +QS STD A+ +LENDMLG+VK  EWNEET E+Q  AESP    DD   ++SERK+++ V
Sbjct: 1244 IQSASTDAADTELENDMLGTVKPVEWNEETAEEQVEAESPALVTDDTDEQSSERKDDDLV 1303

Query: 1367 TGIEENEWDRLLRVRLGALLVLAPIIISLHFM 1398
               EENEWDRLLR+RL   L L+      +F 
Sbjct: 1304 NFTEENEWDRLLRMRLEFPLSLSSATWLCYFF 1335


>gi|334188199|ref|NP_199293.3| chromatin remodeling 4 protein [Arabidopsis thaliana]
 gi|332007781|gb|AED95164.1| chromatin remodeling 4 protein [Arabidopsis thaliana]
          Length = 2223

 Score = 1519 bits (3932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 824/1413 (58%), Positives = 1015/1413 (71%), Gaps = 130/1413 (9%)

Query: 1    MKDNSSSTSTMINRNWVLKRKRRKLPCGPGLSNGKEENLVTSESPRNTPSAK---RRLKN 57
            MKD   S S MI R+WV+K+KRRKLP    + + K ++ +  +SP  T S+K   +RLK 
Sbjct: 1    MKD---SGSEMIKRDWVMKQKRRKLPSILDILDQKVDSSMAFDSPEYTSSSKPSKQRLKT 57

Query: 58   EINADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCP 117
            +   +R+S+K+KGNDG Y+ECVICDLGG+LLCCDSCPRTYH  CL+PPLKRIPNGKW CP
Sbjct: 58   DSTPERNSSKRKGNDGNYFECVICDLGGDLLCCDSCPRTYHTACLNPPLKRIPNGKWICP 117

Query: 118  KCTQKNDQLKPISNLDSISKRARSKIITIKSQSGVKSSGADKVSQIFGNSILARKRSN-K 176
            KC+  ++ LKP++ LD+I+KRAR+K     S++G K    ++ SQI+ +SI++ ++S+ K
Sbjct: 118  KCSPNSEALKPVNRLDAIAKRARTKTKKRNSKAGPK---CERASQIYCSSIISGEQSSEK 174

Query: 177  GKSVLALGVKSLEKSLDSSQVDVSCST----------KPENTSAG-----VPVEGSSSCP 221
            GKS+ A   KS  K + SS +D  CST          +P+++S G      PV  ++  P
Sbjct: 175  GKSISAEESKSTGKEVYSSPMD-GCSTAELGHASADDRPDSSSHGEDDLGKPVIPTADLP 233

Query: 222  NDDDEKQLNASPTDSLADTKFHPAEEVLPHSQVTKSEQNDEVPVEKHEKSSTNGSSGIKF 281
            +D     L+                E L  S+++ +E+  E PVEK E +S+        
Sbjct: 234  SDAGLTLLSC---------------EDLSESKLSDTEKTHEAPVEKLEHASSEIVENKTV 278

Query: 282  VLAIGASERDRKRKPEVKDEDSQKKLRVDKRKRSASASKKRRSKIGTLSPGTSKLHEKQR 341
                    + +KRK E+ D +S ++ + DK++     +KK  SK+G+ S  T      ++
Sbjct: 279  AEMETGKGKRKKRKRELNDGESLERCKTDKKR-----AKKSLSKVGSSSQTTKSPESSKK 333

Query: 342  TNNDEVSASLCEVDVGTKGLDAQRKDELAEETTDPLDKSDKAGVHV-NEIPLC---KDIV 397
                          V  K L   +      E    L K ++  V   N+   C    + +
Sbjct: 334  KKKKN--------RVTLKSLSKPQSKTETPEKVKKLPKEERRAVRATNKSSSCLEDTNSL 385

Query: 398  PFELQQVDRVLGCRVKGDDTSSSCHISATATDDRHSDDFLVSENHNKILEENLACDTDLD 457
            P    QV RVLGCR++G   +S C   +  +DD  SD+   ++  + +++       D +
Sbjct: 386  PVGNLQVHRVLGCRIQGLTKTSLC---SALSDDLCSDNLQATDQRDSLVQ-------DTN 435

Query: 458  AEVTENLAELSPNVIRSSDEECMKNDIGVDRIQVYRRSVTKECKVTKECKGENAIDLLRE 517
            AE+                       +  DRI     S ++  K +++ +       LR+
Sbjct: 436  AELV----------------------VAEDRID----SSSETGKSSRDSR-------LRD 462

Query: 518  DDKDSDPVAVNGKVQDESAVSTEDLGERNDKMVVED-ADVSLR---DNEGLTVSEIHITC 573
             D             D+SA+ TE + E  ++M+ ED ++ +L    D+E + VSE H++ 
Sbjct: 463  KD------------MDDSALGTEGMVEVKEEMLSEDISNATLSRHVDDEDMKVSETHVSV 510

Query: 574  EST---DKDVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIP 630
            E     +   + G+K++    + ++EP   +++ + G+ VSYEFLVKWV KSNIHN+WI 
Sbjct: 511  ERELLEEAHQETGEKST-VADEEIEEPVAAKTSDLIGETVSYEFLVKWVDKSNIHNTWIS 569

Query: 631  ESQLKVLAKRKLENYKAKYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYD 690
            E++LK LAKRKLENYKAKYGT VINIC+++WKQPQR+++LR SK+G +EA+VKWTGL YD
Sbjct: 570  EAELKGLAKRKLENYKAKYGTAVINICEDKWKQPQRIVALRVSKEGNQEAYVKWTGLAYD 629

Query: 691  ECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEE 750
            ECTWE L+EP L+  SHL DLF Q+E++TL++++      +G    ++ E+V LTEQP+E
Sbjct: 630  ECTWESLEEPILKHSSHLIDLFHQYEQKTLERNS------KGNPTRERGEVVTLTEQPQE 683

Query: 751  LKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLV 810
            L+GGALF HQLEALNWLR+CWHKSKNVILADEMGLGKTVSA AF+SSLY EF    PCLV
Sbjct: 684  LRGGALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGVARPCLV 743

Query: 811  LVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNV 870
            LVPLSTMPNWL+EF+LWAP LNVVEYHG AK RAIIR YEWHA +     KK +SYKFNV
Sbjct: 744  LVPLSTMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKPTSYKFNV 803

Query: 871  LLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQN 930
            LLTTYEM+LADSSHLRGVPWEVLVVDEGHRLKNS SKLFSLLN+FSFQHRVLLTGTPLQN
Sbjct: 804  LLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQN 863

Query: 931  NIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
            NIGEMYNLLNFLQP+SFPSLSSFEE+F+DLT+ +KVEELKKLVAPHMLRRLKKDAMQNIP
Sbjct: 864  NIGEMYNLLNFLQPSSFPSLSSFEERFHDLTSAEKVEELKKLVAPHMLRRLKKDAMQNIP 923

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 1050
            PKTERMVPVEL+SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP
Sbjct: 924  PKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 983

Query: 1051 GTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIE 1110
            GTEP+SGS+EFLH+MRIKASAKLTLLHSMLKVL+KEGHRVLIFSQMTKLLDILEDYLNIE
Sbjct: 984  GTEPESGSLEFLHDMRIKASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYLNIE 1043

Query: 1111 FGPKTYERVDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDF 1170
            FGPKT+ERVDGSV+V DRQAAI RFNQDK+RFVFLLSTR+CGLGINLATADTVIIYDSDF
Sbjct: 1044 FGPKTFERVDGSVAVADRQAAIARFNQDKNRFVFLLSTRACGLGINLATADTVIIYDSDF 1103

Query: 1171 NPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEV 1230
            NPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKE 
Sbjct: 1104 NPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEF 1163

Query: 1231 EDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGS 1290
            EDILRWGTEELFNDS G N KD  E+N ++ + + DLE K RK+GGGLGDVYQDKCTEG+
Sbjct: 1164 EDILRWGTEELFNDSAGENKKDTAESNGNL-DVIMDLESKSRKKGGGLGDVYQDKCTEGN 1222

Query: 1291 TKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEWNEETTEDQ--AESPVA 1348
             KIVWD+ AI +LLDRSNLQS STD A+ +L+NDMLGSVK  EWNEET E+Q  AESP  
Sbjct: 1223 GKIVWDDIAIMKLLDRSNLQSASTDAADTELDNDMLGSVKPVEWNEETAEEQVGAESPAL 1282

Query: 1349 AVDDASAENSERKEENAVTGIEENEWDRLLRVR 1381
              DD    +SERK+++ V   EENEWDRLLR+R
Sbjct: 1283 VTDDTGEPSSERKDDDVVNFTEENEWDRLLRMR 1315


>gi|2660669|gb|AAC79140.1| human Mi-2 autoantigen-like protein [Arabidopsis thaliana]
 gi|9758384|dbj|BAB08833.1| helicase-like protein [Arabidopsis thaliana]
          Length = 2228

 Score = 1506 bits (3898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 815/1397 (58%), Positives = 1005/1397 (71%), Gaps = 127/1397 (9%)

Query: 18   LKRKRRKLPCGPGLSNGKEENLVTSESPRNTPSAK---RRLKNEINADRSSTKKKGNDGY 74
            +K+KRRKLP    + + K ++ +  +SP  T S+K   +RLK +   +R+S+K+KGNDG 
Sbjct: 1    MKQKRRKLPSILDILDQKVDSSMAFDSPEYTSSSKPSKQRLKTDSTPERNSSKRKGNDGN 60

Query: 75   YYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDS 134
            Y+ECVICDLGG+LLCCDSCPRTYH  CL+PPLKRIPNGKW CPKC+  ++ LKP++ LD+
Sbjct: 61   YFECVICDLGGDLLCCDSCPRTYHTACLNPPLKRIPNGKWICPKCSPNSEALKPVNRLDA 120

Query: 135  ISKRARSKIITIKSQSGVKSSGADKVSQIFGNSILARKRSN-KGKSVLALGVKSLEKSLD 193
            I+KRAR+K     S++G K    ++ SQI+ +SI++ ++S+ KGKS+ A   KS  K + 
Sbjct: 121  IAKRARTKTKKRNSKAGPK---CERASQIYCSSIISGEQSSEKGKSISAEESKSTGKEVY 177

Query: 194  SSQVDVSCST----------KPENTSAG-----VPVEGSSSCPNDDDEKQLNASPTDSLA 238
            SS +D  CST          +P+++S G      PV  ++  P+D     L+        
Sbjct: 178  SSPMD-GCSTAELGHASADDRPDSSSHGEDDLGKPVIPTADLPSDAGLTLLSC------- 229

Query: 239  DTKFHPAEEVLPHSQVTKSEQNDEVPVEKHEKSSTNGSSGIKFVLAIGASERDRKRKPEV 298
                    E L  S+++ +E+  E PVEK E +S+                + +KRK E+
Sbjct: 230  --------EDLSESKLSDTEKTHEAPVEKLEHASSEIVENKTVAEMETGKGKRKKRKREL 281

Query: 299  KDEDSQKKLRVDKRKRSASASKKRRSKIGTLSPGTSKLHEKQRTNNDEVSASLCEVDVGT 358
             D +S ++ + DK++     +KK  SK+G+ S  T      ++              V  
Sbjct: 282  NDGESLERCKTDKKR-----AKKSLSKVGSSSQTTKSPESSKKKKKKN--------RVTL 328

Query: 359  KGLDAQRKDELAEETTDPLDKSDKAGVHV-NEIPLC---KDIVPFELQQVDRVLGCRVKG 414
            K L   +      E    L K ++  V   N+   C    + +P    QV RVLGCR++G
Sbjct: 329  KSLSKPQSKTETPEKVKKLPKEERRAVRATNKSSSCLEDTNSLPVGNLQVHRVLGCRIQG 388

Query: 415  DDTSSSCHISATATDDRHSDDFLVSENHNKILEENLACDTDLDAEVTENLAELSPNVIRS 474
               +S C   +  +DD  SD+   ++  + +++       D +AE+              
Sbjct: 389  LTKTSLC---SALSDDLCSDNLQATDQRDSLVQ-------DTNAELV------------- 425

Query: 475  SDEECMKNDIGVDRIQVYRRSVTKECKVTKECKGENAIDLLREDDKDSDPVAVNGKVQDE 534
                     +  DRI     S ++  K +++ +       LR+ D             D+
Sbjct: 426  ---------VAEDRID----SSSETGKSSRDSR-------LRDKD------------MDD 453

Query: 535  SAVSTEDLGERNDKMVVED-ADVSLR---DNEGLTVSEIHITCEST---DKDVDVGKKTS 587
            SA+ TE + E  ++M+ ED ++ +L    D+E + VSE H++ E     +   + G+K++
Sbjct: 454  SALGTEGMVEVKEEMLSEDISNATLSRHVDDEDMKVSETHVSVERELLEEAHQETGEKST 513

Query: 588  GSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKA 647
                + ++EP   +++ + G+ VSYEFLVKWV KSNIHN+WI E++LK LAKRKLENYKA
Sbjct: 514  -VADEEIEEPVAAKTSDLIGETVSYEFLVKWVDKSNIHNTWISEAELKGLAKRKLENYKA 572

Query: 648  KYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
            KYGT VINIC+++WKQPQR+++LR SK+G +EA+VKWTGL YDECTWE L+EP L+  SH
Sbjct: 573  KYGTAVINICEDKWKQPQRIVALRVSKEGNQEAYVKWTGLAYDECTWESLEEPILKHSSH 632

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
            L DLF Q+E++TL++++      +G    ++ E+V LTEQP+EL+GGALF HQLEALNWL
Sbjct: 633  LIDLFHQYEQKTLERNS------KGNPTRERGEVVTLTEQPQELRGGALFAHQLEALNWL 686

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
            R+CWHKSKNVILADEMGLGKTVSA AF+SSLY EF    PCLVLVPLSTMPNWL+EF+LW
Sbjct: 687  RRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLW 746

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            AP LNVVEYHG AK RAIIR YEWHA +     KK +SYKFNVLLTTYEM+LADSSHLRG
Sbjct: 747  APLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKPTSYKFNVLLTTYEMVLADSSHLRG 806

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            VPWEVLVVDEGHRLKNS SKLFSLLN+FSFQHRVLLTGTPLQNNIGEMYNLLNFLQP+SF
Sbjct: 807  VPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSF 866

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
            PSLSSFEE+F+DLT+ +KVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL+SIQAE
Sbjct: 867  PSLSSFEERFHDLTSAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAE 926

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRI 1067
            YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP+SGS+EFLH+MRI
Sbjct: 927  YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSLEFLHDMRI 986

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            KASAKLTLLHSMLKVL+KEGHRVLIFSQMTKLLDILEDYLNIEFGPKT+ERVDGSV+V D
Sbjct: 987  KASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVAD 1046

Query: 1128 RQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            RQAAI RFNQDK+RFVFLLSTR+CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ
Sbjct: 1047 RQAAIARFNQDKNRFVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1106

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFNDSPG 1247
            SKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKE EDILRWGTEELFNDS G
Sbjct: 1107 SKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEFEDILRWGTEELFNDSAG 1166

Query: 1248 INGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRS 1307
             N KD  E+N ++ + + DLE K RK+GGGLGDVYQDKCTEG+ KIVWD+ AI +LLDRS
Sbjct: 1167 ENKKDTAESNGNL-DVIMDLESKSRKKGGGLGDVYQDKCTEGNGKIVWDDIAIMKLLDRS 1225

Query: 1308 NLQSGSTDLAEGDLENDMLGSVKATEWNEETTEDQ--AESPVAAVDDASAENSERKEENA 1365
            NLQS STD A+ +L+NDMLGSVK  EWNEET E+Q  AESP    DD    +SERK+++ 
Sbjct: 1226 NLQSASTDAADTELDNDMLGSVKPVEWNEETAEEQVGAESPALVTDDTGEPSSERKDDDV 1285

Query: 1366 VTGIEENEWDRLLRVRL 1382
            V   EENEWDRLLR+RL
Sbjct: 1286 VNFTEENEWDRLLRMRL 1302


>gi|222637088|gb|EEE67220.1| hypothetical protein OsJ_24338 [Oryza sativa Japonica Group]
          Length = 2258

 Score = 1240 bits (3209), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/990 (63%), Positives = 733/990 (74%), Gaps = 48/990 (4%)

Query: 403  QVDRVLGCRVKGDDTSSSCHISA--------TATDDRHSDDFLVSENHNKILEENLACDT 454
            QVDR+LGCR++     S  H S+        +A+        L+   H +I   N   + 
Sbjct: 345  QVDRILGCRLQTSQIISPAHASSEQIDMAPPSASGAPEPSQALLKGLHEEIQSSNSDTNV 404

Query: 455  DLDAEVTENLAELSPNVIRSSDEECMKNDIGVDRIQVYRRSVTKECKVTKECKGENAIDL 514
              DA   E   +   N +  SD +   N     R   ++ S+  + ++       +A  +
Sbjct: 405  TEDACADELANDGGENNLDCSDAQKESNV----RSHGHKESLNAK-EIMNTASACSADQI 459

Query: 515  LREDDKDSDPVAVNGKVQDESAVSTEDLGERND-KMVVEDADVSLRDNEGLTVSEIHITC 573
            +   D  +    V   V  E    T+   E+ND K  V  AD           +E+H   
Sbjct: 460  VTVKDAGAVQTYVTASVNGEYETVTDIPEEKNDTKHPVSKAD-----------TEVHTKQ 508

Query: 574  ESTDKDVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQ 633
            E T      GK         +QE  + E         +YEFLVKWVGKSNIHNSWI ES+
Sbjct: 509  EHTPDSKLHGK---------IQETELKEH-----DGTTYEFLVKWVGKSNIHNSWISESE 554

Query: 634  LKVLAKRKLENYKAKYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECT 693
            LK LAKRKLENYKAKYGT +INIC E+W QPQRVI+LR+S D   EA +KW  LPYDECT
Sbjct: 555  LKALAKRKLENYKAKYGTGLINICKEQWCQPQRVIALRTSLDEIEEALIKWCALPYDECT 614

Query: 694  WEKLDEPALEKYSHLTDLFVQFERQTLKKD-ASEDELPRGKGDCQQSEIVALTEQPEELK 752
            WE+LDEP + KY+HL   F +FE Q L KD       PR     +  E   L EQP+EL+
Sbjct: 615  WERLDEPTMVKYAHLVTQFKKFESQALDKDKGGSHAKPR-----EHQEFNMLVEQPKELQ 669

Query: 753  GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLV 812
            GG LFPHQLEALNWLRKCW+KSKNVILADEMGLGKTVSACAF+SSL CE+K  LPCLVLV
Sbjct: 670  GGMLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFLSSLCCEYKINLPCLVLV 729

Query: 813  PLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLL 872
            PLSTMPNW+AEFA WAP+LNVVEYHG A+AR+IIRQYEWH  D   + K   S+KFNVLL
Sbjct: 730  PLSTMPNWMAEFASWAPHLNVVEYHGSARARSIIRQYEWHEGDASQMGKIKKSHKFNVLL 789

Query: 873  TTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNI 932
            TTYEM+L D+++LR V WEVL+VDEGHRLKNS SKLFSLLN+ SFQHRVLLTGTPLQNNI
Sbjct: 790  TTYEMVLVDAAYLRSVSWEVLIVDEGHRLKNSSSKLFSLLNTLSFQHRVLLTGTPLQNNI 849

Query: 933  GEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPK 992
            GEMYNLLNFLQPASFPSL+SFEEKFNDLTTT+KVEELK LVAPHMLRRLKKDAMQNIPPK
Sbjct: 850  GEMYNLLNFLQPASFPSLASFEEKFNDLTTTEKVEELKNLVAPHMLRRLKKDAMQNIPPK 909

Query: 993  TERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT 1052
            TERMVPVEL+SIQAEYYRAMLTKNYQ+LRNIGKG A QS+LNIVMQLRKVCNHPYLIPGT
Sbjct: 910  TERMVPVELTSIQAEYYRAMLTKNYQVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPGT 969

Query: 1053 EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFG 1112
            EP+SGS EFLHEMRIKASAKLTLLHSMLK+L+K+GHRVLIFSQMTKLLDILEDYL  EFG
Sbjct: 970  EPESGSPEFLHEMRIKASAKLTLLHSMLKILHKDGHRVLIFSQMTKLLDILEDYLTWEFG 1029

Query: 1113 PKTYERVDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
            PKT+ERVDGSVSV +RQAAI RFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNP
Sbjct: 1030 PKTFERVDGSVSVAERQAAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1089

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVED 1232
            HADIQAMNRAHRIGQS RLLVYRLVVRASVEERIL LAKKKLMLDQLFVNKS SQKEVED
Sbjct: 1090 HADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVNKSESQKEVED 1149

Query: 1233 ILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTK 1292
            I+RWGTEELF +S  +  KD  E + +  + V ++E KH+++ GGLGDVY+D+C +GS K
Sbjct: 1150 IIRWGTEELFRNS-DVAVKDNNEASGAKND-VAEVEFKHKRKTGGLGDVYEDRCADGSAK 1207

Query: 1293 IVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEWNEETTEDQ-AESPVAAVD 1351
             +WDENAI +LLDRSN+ S   +  +GDL+NDMLG+VK+ +WN+E  +D  A   +  +D
Sbjct: 1208 FIWDENAITKLLDRSNVPSTVAESTDGDLDNDMLGTVKSIDWNDELNDDPGATEDIPNID 1267

Query: 1352 DASAENSERKEENAVTGIEENEWDRLLRVR 1381
            +   E +   +++A   +EENEWD+LLRVR
Sbjct: 1268 NDGCEQASEAKQDAANRVEENEWDKLLRVR 1297



 Score =  144 bits (364), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/141 (50%), Positives = 93/141 (65%), Gaps = 5/141 (3%)

Query: 1   MKDNSSSTSTMINRNWVLK--RKRRKLPCGPGLSNGKEENLVTSESPRNTPSAKRRLKNE 58
           MK+ SS   +  + +WVLK  RKR KL   P   +     ++ S+   N  S K+++K++
Sbjct: 1   MKERSSLCESAADGSWVLKYKRKRSKLTVSPSSEHDASSPILDSQ--MNNGSIKKKIKHD 58

Query: 59  INADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPK 118
            N   S+ K +G+DGY+YECV CDLGGNLLCCDSCPRTYHL+CL+PPLKR P G WQCP+
Sbjct: 59  TNISPSTKKIRGHDGYFYECVECDLGGNLLCCDSCPRTYHLECLNPPLKRAPPGNWQCPR 118

Query: 119 CTQKNDQLKPISNLDS-ISKR 138
           C  K   LK + N D+  SKR
Sbjct: 119 CRTKKVSLKLLDNADADTSKR 139


>gi|357116837|ref|XP_003560183.1| PREDICTED: uncharacterized protein LOC100822490 [Brachypodium
            distachyon]
          Length = 2256

 Score = 1239 bits (3207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1008 (62%), Positives = 743/1008 (73%), Gaps = 54/1008 (5%)

Query: 384  GVHVNEIPLCKDIVPFELQQVDRVLGCRVKGDDTSSSCHISATATD--DRHSDDFLVSEN 441
            GV  N+I     + P + +QVDR+LGCR++     S  H S+   +  +  ++D      
Sbjct: 324  GVAENKI-----MTPQQDRQVDRILGCRLQTSQIISQPHASSDQIELSNSQTEDIAPPSV 378

Query: 442  HNKILEENLACDTDLDAEVTENLAELSPNVIRSSDEECMKNDIGVDRIQVYRRSVTKECK 501
             + ++    + + D D  + +  A+ S N+   +   C+      D ++  + S  K C 
Sbjct: 379  SSALIR---SSNNDTDTTLEDVYADESANL---AGGHCL------DGVEAQKESCGKSCD 426

Query: 502  VTKECKGENAIDLLREDDKDSDPVAVNGKVQDESAVSTEDLGERNDKMVVEDADVSLRDN 561
              +       +  + E   D   + V      +S V  +D+   N     E   VS   +
Sbjct: 427  SKESVNRAEIMKTVSEHCIDQI-ITVK-----DSGVVGKDMASTN----CEFEAVSDGTS 476

Query: 562  EGLTVSEIHITCESTDKDVDVGKKTSGSVAKRVQEPAVTESAQVKGKA------VSYEFL 615
            EG +        E  D ++ V K       K+   P +     +   A       ++EFL
Sbjct: 477  EGKS--------EKGDIELSVSKADVRVHTKQEHTPEIKVHGNINAIAGKDHDVTAFEFL 528

Query: 616  VKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDERWKQPQRVISLRSSKD 675
            VKWVGKSNIHN+WI ES+LK LAKRKLENYKAKYG  +INIC ++W QPQRVI+LR+S D
Sbjct: 529  VKWVGKSNIHNNWISESELKTLAKRKLENYKAKYGMGLINICKDQWCQPQRVIALRASLD 588

Query: 676  GTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGD 735
               EA +KW GLPYDECTWE+LDEP + KY HL   F  FE Q L KD         KG 
Sbjct: 589  EVEEALIKWCGLPYDECTWERLDEPIMLKYVHLVTQFKNFECQALDKDT--------KGS 640

Query: 736  CQQSE-IVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAF 794
            C  +     L EQP+EL+GG LFPHQLEALNWLRKCW+KSKNVILADEMGLGKTVSACAF
Sbjct: 641  CANARNCQELVEQPKELQGGMLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAF 700

Query: 795  ISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHAS 854
            +SSL CEFK  LPCLVLVPLSTMPNW+AEFA WAP+LNVVEYHG A+AR+IIRQYEW+  
Sbjct: 701  LSSLCCEFKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSIIRQYEWYEG 760

Query: 855  DPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNS 914
            D + + K   S+KFNVLLTTYEM+L D+++LR V WEVL+VDEGHRLKNS SKLFSLLN+
Sbjct: 761  DANQIGKTKKSHKFNVLLTTYEMVLVDATYLRSVSWEVLIVDEGHRLKNSSSKLFSLLNT 820

Query: 915  FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVA 974
            FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSL+SFEEKFNDL T +KVEELKKLVA
Sbjct: 821  FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNDLATAEKVEELKKLVA 880

Query: 975  PHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLN 1034
            PHMLRRLKKDAM+NIPPKTERMVPVEL+SIQAEYYRAMLTKNYQ+LRN GKG A QS+LN
Sbjct: 881  PHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNTGKGGAHQSLLN 940

Query: 1035 IVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFS 1094
            IVMQLRKVCNHPYLIPGTEPDSGS EFLHEMRIKASAKL LLHSMLK+L K+GHRVLIFS
Sbjct: 941  IVMQLRKVCNHPYLIPGTEPDSGSPEFLHEMRIKASAKLALLHSMLKILNKDGHRVLIFS 1000

Query: 1095 QMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLG 1154
            QMTKLLDILEDYL +EFGPKT+ERVDGSVSV +RQAAITRFNQDK+RFVFLLSTRSCGLG
Sbjct: 1001 QMTKLLDILEDYLTLEFGPKTFERVDGSVSVAERQAAITRFNQDKTRFVFLLSTRSCGLG 1060

Query: 1155 INLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKL 1214
            INLATADTVIIYDSDFNPHADIQAMNRAHRIGQS RLLVYRLVVRASVEERILQLAKKKL
Sbjct: 1061 INLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKL 1120

Query: 1215 MLDQLFVNKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            MLDQLFVNKS SQKEVEDI+RWGTEELF +S  +NGKD  E  +  +  V D+E KHR+R
Sbjct: 1121 MLDQLFVNKSESQKEVEDIIRWGTEELFRNSDAVNGKDNDE-ASGAKHDVCDVEVKHRRR 1179

Query: 1275 GGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW 1334
             GGLGDVY+DKC   ST ++WDENAI +LLDRSNL +   +  +GDL+NDMLG+VK+ +W
Sbjct: 1180 TGGLGDVYEDKCIGSSTNLIWDENAIMKLLDRSNLPTTVAESTDGDLDNDMLGTVKSIDW 1239

Query: 1335 NEETTEDQ-AESPVAAVDDASAENSERKEENAVTGIEENEWDRLLRVR 1381
            N+E  +D  A   +  +D+   E +   +++A   +EENEWD+LLR+R
Sbjct: 1240 NDEVNDDPGATEDILNIDNGGCEQASETKQDAANPVEENEWDKLLRLR 1287



 Score =  153 bits (386), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 75/139 (53%), Positives = 92/139 (66%), Gaps = 1/139 (0%)

Query: 1   MKDNSSSTSTMINRNWVLKRKRRKLPCGPGLSNGKEENLVTSESPRNTPSAKRRLKNEIN 60
           MK+ SS   +  + NWV K KR++       SN  E    TS+S RN  S KRR K++ N
Sbjct: 1   MKERSSLCDSAADGNWVSKYKRKRSKLTASSSNEHEGASPTSDSLRNNDSIKRRFKHDNN 60

Query: 61  ADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
              S+ K +G+DGY+YECV CDLGGNLLCCDSCPRTYHL+CL+PPLKR P G WQCP+C 
Sbjct: 61  ISSSTKKIRGHDGYFYECVECDLGGNLLCCDSCPRTYHLECLNPPLKRAPPGNWQCPRCR 120

Query: 121 QKNDQLKPISNLDS-ISKR 138
            K   LK + N D+  SKR
Sbjct: 121 TKQVSLKLLGNADAETSKR 139


>gi|218199663|gb|EEC82090.1| hypothetical protein OsI_26092 [Oryza sativa Indica Group]
          Length = 2275

 Score = 1237 bits (3200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/994 (63%), Positives = 732/994 (73%), Gaps = 56/994 (5%)

Query: 403  QVDRVLGCRVKGDDTSSSCHISATATDDRHSDDFLVSENHNKILEENLACDTDLDAEVTE 462
            QVDR+LGCR++     S  H S+   D       +   + +   E + A    L  E+  
Sbjct: 362  QVDRILGCRLQTSQIISPAHASSEQID-------MAPPSASGAPEPSQALSKGLHEEIQS 414

Query: 463  NLAELSPNVIRSSDEECMKNDIGVDRIQV--------YRRSVTKECKVTKECKGE----N 510
            + ++   NV   +  + + ND G + +           R    KE    KE        +
Sbjct: 415  SNSDT--NVTEDACADELANDGGENNLDCSDAQKESNVRSHGHKESLNAKEIMNTASACS 472

Query: 511  AIDLLREDDKDSDPVAVNGKVQDESAVSTEDLGERND-KMVVEDADVSLRDNEGLTVSEI 569
            A  ++   D  +    V   V  E    T+   E+ND K  V  AD           +E+
Sbjct: 473  ADQIVTVKDAGAVQTYVTASVNGEYETVTDIPEEKNDTKHPVSKAD-----------TEV 521

Query: 570  HITCESTDKDVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWI 629
            H   E T      GK         +QE  + E         +YEFLVKWVGKSNIHNSWI
Sbjct: 522  HTKQEHTPDSKLHGK---------IQETELKEH-----DGTTYEFLVKWVGKSNIHNSWI 567

Query: 630  PESQLKVLAKRKLENYKAKYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPY 689
             ES+LK LAKRKLENYKAKYGT +INIC E+W QPQRVI+LR+S D   EA +KW  LPY
Sbjct: 568  SESELKALAKRKLENYKAKYGTGLINICKEQWCQPQRVIALRTSLDEIEEALIKWCALPY 627

Query: 690  DECTWEKLDEPALEKYSHLTDLFVQFERQTLKKD-ASEDELPRGKGDCQQSEIVALTEQP 748
            DECTWE+LDEP + KY+HL   F +FE Q L KD       PR     +  E   L EQP
Sbjct: 628  DECTWERLDEPTMVKYAHLVTQFKKFESQALDKDKGGSHAKPR-----EHQEFNMLVEQP 682

Query: 749  EELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPC 808
            +EL+GG LFPHQLEALNWLRKCW+KSKNVILADEMGLGKTVSACAF+SSL CE+K  LPC
Sbjct: 683  KELQGGMLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFLSSLCCEYKINLPC 742

Query: 809  LVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKF 868
            LVLVPLSTMPNW+AEFA WAP+LNVVEYHG A+AR+IIRQYEWH  D   + K   S+KF
Sbjct: 743  LVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARSIIRQYEWHEGDASQMGKIKKSHKF 802

Query: 869  NVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPL 928
            NVLLTTYEM+L D+++LR V WEVL+VDEGHRLKNS SKLFSLLN+ SFQHRVLLTGTPL
Sbjct: 803  NVLLTTYEMVLVDAAYLRSVSWEVLIVDEGHRLKNSSSKLFSLLNTLSFQHRVLLTGTPL 862

Query: 929  QNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQN 988
            QNNIGEMYNLLNFLQPASFPSL+SFEEKFNDLTTT+KVEELK LVAPHMLRRLKKDAMQN
Sbjct: 863  QNNIGEMYNLLNFLQPASFPSLASFEEKFNDLTTTEKVEELKNLVAPHMLRRLKKDAMQN 922

Query: 989  IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYL 1048
            IPPKTERMVPVEL+SIQAEYYRAMLTKNYQ+LRNIGKG A QS+LNIVMQLRKVCNHPYL
Sbjct: 923  IPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNIGKGGAHQSLLNIVMQLRKVCNHPYL 982

Query: 1049 IPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
            IPGTEP+SGS EFLHEMRIKASAKLTLLHSMLK+L+K+GHRVLIFSQMTKLLDILEDYL 
Sbjct: 983  IPGTEPESGSPEFLHEMRIKASAKLTLLHSMLKILHKDGHRVLIFSQMTKLLDILEDYLT 1042

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDS 1168
             EFGPKT+ERVDGSVSV +RQAAI RFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDS
Sbjct: 1043 WEFGPKTFERVDGSVSVAERQAAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDS 1102

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQK 1228
            DFNPHADIQAMNRAHRIGQS RLLVYRLVVRASVEERIL LAKKKLMLDQLFVNKS SQK
Sbjct: 1103 DFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVNKSESQK 1162

Query: 1229 EVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTE 1288
            EVEDI+RWGTEELF +S  +  KD  E + +  + V ++E KH+++ GGLGDVY+D+C +
Sbjct: 1163 EVEDIIRWGTEELFRNS-DVAVKDNNEASGAKND-VAEVEFKHKRKTGGLGDVYEDRCAD 1220

Query: 1289 GSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEWNEETTEDQ-AESPV 1347
            GS K  WDENAI +LLDRSN+ S   +  +GDL+NDMLG+VK+ +WN+E  +D  A   +
Sbjct: 1221 GSAKFNWDENAITKLLDRSNVPSTVAESTDGDLDNDMLGTVKSIDWNDELNDDPGATEDI 1280

Query: 1348 AAVDDASAENSERKEENAVTGIEENEWDRLLRVR 1381
              +D+   E +   +++A   +EENEWD+LLRVR
Sbjct: 1281 PNIDNDGCEQASEAKQDAANRVEENEWDKLLRVR 1314



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/141 (50%), Positives = 93/141 (65%), Gaps = 5/141 (3%)

Query: 1   MKDNSSSTSTMINRNWVLK--RKRRKLPCGPGLSNGKEENLVTSESPRNTPSAKRRLKNE 58
           MK+ SS   +  + +WVLK  RKR KL   P   +     ++ S+   N  S K+++K++
Sbjct: 2   MKERSSLCESAADGSWVLKYKRKRSKLTVSPSSEHDASSPILDSQ--MNNGSIKKKIKHD 59

Query: 59  INADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPK 118
            N   S+ K +G+DGY+YECV CDLGGNLLCCDSCPRTYHL+CL+PPLKR P G WQCP+
Sbjct: 60  TNISPSTKKIRGHDGYFYECVECDLGGNLLCCDSCPRTYHLECLNPPLKRAPPGNWQCPR 119

Query: 119 CTQKNDQLKPISNLDS-ISKR 138
           C  K   LK + N D+  SKR
Sbjct: 120 CRTKKVSLKLLDNADADTSKR 140


>gi|414886765|tpg|DAA62779.1| TPA: putative homeodomain-like transcription factor superfamily
            protein [Zea mays]
          Length = 2186

 Score = 1209 bits (3127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1003 (61%), Positives = 730/1003 (72%), Gaps = 89/1003 (8%)

Query: 400  ELQQVDRVLGCRVKGDDTSSSCHISATATDDR----------HSDDFLVSENHNKILEEN 449
            E QQVDR+LGCR++    +   H S    +            H+   + +  H+      
Sbjct: 347  EDQQVDRILGCRLQMSQINPPSHASLEQFESANLQVDGMVLPHASAGIPNRPHDGTESSR 406

Query: 450  LACDTDLDAEVTENLAELSPNVIRSSDEECMKNDIGVDRIQVYRRSVTKECKVTKECKGE 509
                 D+ A+ + N +  +  + + +D +  +        + ++R   K  K+   C G+
Sbjct: 407  NGTIEDICADESANHSGHNLEMRKDTDSKSHEK-------ESHKREQVK--KILSVCSGD 457

Query: 510  NAIDLLREDDKDSDPVAVNGKVQDESAVSTEDL-GERNDKMV-VEDADVSLRDNEGLT-V 566
               +++++D    + V+ + K +DE    T DL  E++D ++ V  A   +R N+  T  
Sbjct: 458  ET-NIMKDDQVVRENVSASKKGEDE----TSDLPAEKDDTILPVTRACTMIRTNQDHTDE 512

Query: 567  SEIHITCES-TDKDV-DVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNI 624
            S+ H   E  T+KD  D G                            YEFL+KWVGKSNI
Sbjct: 513  SKQHGKIEQITNKDYNDAG----------------------------YEFLIKWVGKSNI 544

Query: 625  HNSWIPESQLKVLAKRKLENYKAKYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKW 684
            HNSW+ ES++K+LAKRKLENYKAKYG   +                        E  +KW
Sbjct: 545  HNSWVSESEVKILAKRKLENYKAKYGMNEV-----------------------EEVLIKW 581

Query: 685  TGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVAL 744
             GLPYDECTWE+ DEP L KYSHL   F  FE Q L KD  +D          + E+  L
Sbjct: 582  CGLPYDECTWERSDEPTLMKYSHLVTQFKNFECQALDKDVVKDY----ANARNRHELNVL 637

Query: 745  TEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
             +QP+EL+GG LFPHQLEALNWLRKCW+KSKNVILADEMGLGKTVSACAF+SSLYCEFK 
Sbjct: 638  VDQPKELQGGMLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFLSSLYCEFKI 697

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTS 864
             LPCLVLVPLSTMPNW+AEF+ WAP+LNVVEYHG A++R+IIRQYEWHA D   + K   
Sbjct: 698  NLPCLVLVPLSTMPNWMAEFSSWAPHLNVVEYHGSARSRSIIRQYEWHAGDASQIGKTKR 757

Query: 865  SYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLT 924
            SYKFNVLLTTYEM+L D+++LR V WEVL+VDEGHRLKNS SKLFSLLNSFSFQHRVLLT
Sbjct: 758  SYKFNVLLTTYEMVLVDAAYLRSVSWEVLIVDEGHRLKNSSSKLFSLLNSFSFQHRVLLT 817

Query: 925  GTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKD 984
            GTPLQNNIGEMYNLLNFLQP SFPSLSSFEEKFNDLTT +KVEELKKLVAPHMLRRLKKD
Sbjct: 818  GTPLQNNIGEMYNLLNFLQPTSFPSLSSFEEKFNDLTTAEKVEELKKLVAPHMLRRLKKD 877

Query: 985  AMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCN 1044
            AMQNIPPK ERMVPVEL+SIQAEYYRAMLTKNYQ+LRNIGKG A QS+LNIVMQLRKVCN
Sbjct: 878  AMQNIPPKIERMVPVELTSIQAEYYRAMLTKNYQVLRNIGKGGAHQSLLNIVMQLRKVCN 937

Query: 1045 HPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILE 1104
            HPYLIPGTEP+SGS EFLHEMRIKASAKLTLLH MLK+L+KEGHRVLIFSQMTKLLDILE
Sbjct: 938  HPYLIPGTEPESGSPEFLHEMRIKASAKLTLLHLMLKILHKEGHRVLIFSQMTKLLDILE 997

Query: 1105 DYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVI 1164
            DYL +EFGPKT+ERVDGSVSV +RQAAI RFNQDK+RFVFLLSTRSCGLGINLATADTVI
Sbjct: 998  DYLTLEFGPKTFERVDGSVSVAERQAAIVRFNQDKTRFVFLLSTRSCGLGINLATADTVI 1057

Query: 1165 IYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKS 1224
            IYDSDFNPHADIQAMNRAHRIGQS RLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKS
Sbjct: 1058 IYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKS 1117

Query: 1225 GSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQD 1284
             SQKEVEDI+RWGTEELF +S  ++GKD    N+ +   V D+E KHR++ GGLGDVY+D
Sbjct: 1118 ESQKEVEDIIRWGTEELFGNSDSVDGKD----NSEVPGPVADVEFKHRRKTGGLGDVYED 1173

Query: 1285 KCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEWNEETTEDQAE 1344
            KC  GSTK+VWDENAI +LLDRSNL S   +  +GDL+NDMLG+VK+ +WN+E  +D   
Sbjct: 1174 KCIGGSTKLVWDENAILKLLDRSNLPSSMAESTDGDLDNDMLGTVKSIDWNDELNDDPGT 1233

Query: 1345 SP-VAAVDDASAENSERKEENAVTGIEENEWDRLLRVRLGALL 1386
            +   A +D+  +E +   ++ A    EENEWD+LLRVR  A+L
Sbjct: 1234 NEDTAPIDNDGSEQASESKQGATNRSEENEWDKLLRVRYSAIL 1276


>gi|414886764|tpg|DAA62778.1| TPA: putative homeodomain-like transcription factor superfamily
            protein [Zea mays]
          Length = 2379

 Score = 1206 bits (3120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/998 (62%), Positives = 727/998 (72%), Gaps = 89/998 (8%)

Query: 400  ELQQVDRVLGCRVKGDDTSSSCHISATATDDR----------HSDDFLVSENHNKILEEN 449
            E QQVDR+LGCR++    +   H S    +            H+   + +  H+      
Sbjct: 545  EDQQVDRILGCRLQMSQINPPSHASLEQFESANLQVDGMVLPHASAGIPNRPHDGTESSR 604

Query: 450  LACDTDLDAEVTENLAELSPNVIRSSDEECMKNDIGVDRIQVYRRSVTKECKVTKECKGE 509
                 D+ A+ + N +  +  + + +D +  +        + ++R   K  K+   C G+
Sbjct: 605  NGTIEDICADESANHSGHNLEMRKDTDSKSHEK-------ESHKREQVK--KILSVCSGD 655

Query: 510  NAIDLLREDDKDSDPVAVNGKVQDESAVSTEDL-GERNDKMV-VEDADVSLRDNEGLT-V 566
               +++++D    + V+ + K +DE    T DL  E++D ++ V  A   +R N+  T  
Sbjct: 656  ET-NIMKDDQVVRENVSASKKGEDE----TSDLPAEKDDTILPVTRACTMIRTNQDHTDE 710

Query: 567  SEIHITCES-TDKDV-DVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNI 624
            S+ H   E  T+KD  D G                            YEFL+KWVGKSNI
Sbjct: 711  SKQHGKIEQITNKDYNDAG----------------------------YEFLIKWVGKSNI 742

Query: 625  HNSWIPESQLKVLAKRKLENYKAKYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKW 684
            HNSW+ ES++K+LAKRKLENYKAKYG   +                        E  +KW
Sbjct: 743  HNSWVSESEVKILAKRKLENYKAKYGMNEV-----------------------EEVLIKW 779

Query: 685  TGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVAL 744
             GLPYDECTWE+ DEP L KYSHL   F  FE Q L KD  +D          + E+  L
Sbjct: 780  CGLPYDECTWERSDEPTLMKYSHLVTQFKNFECQALDKDVVKDY----ANARNRHELNVL 835

Query: 745  TEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
             +QP+EL+GG LFPHQLEALNWLRKCW+KSKNVILADEMGLGKTVSACAF+SSLYCEFK 
Sbjct: 836  VDQPKELQGGMLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFLSSLYCEFKI 895

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTS 864
             LPCLVLVPLSTMPNW+AEF+ WAP+LNVVEYHG A++R+IIRQYEWHA D   + K   
Sbjct: 896  NLPCLVLVPLSTMPNWMAEFSSWAPHLNVVEYHGSARSRSIIRQYEWHAGDASQIGKTKR 955

Query: 865  SYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLT 924
            SYKFNVLLTTYEM+L D+++LR V WEVL+VDEGHRLKNS SKLFSLLNSFSFQHRVLLT
Sbjct: 956  SYKFNVLLTTYEMVLVDAAYLRSVSWEVLIVDEGHRLKNSSSKLFSLLNSFSFQHRVLLT 1015

Query: 925  GTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKD 984
            GTPLQNNIGEMYNLLNFLQP SFPSLSSFEEKFNDLTT +KVEELKKLVAPHMLRRLKKD
Sbjct: 1016 GTPLQNNIGEMYNLLNFLQPTSFPSLSSFEEKFNDLTTAEKVEELKKLVAPHMLRRLKKD 1075

Query: 985  AMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCN 1044
            AMQNIPPK ERMVPVEL+SIQAEYYRAMLTKNYQ+LRNIGKG A QS+LNIVMQLRKVCN
Sbjct: 1076 AMQNIPPKIERMVPVELTSIQAEYYRAMLTKNYQVLRNIGKGGAHQSLLNIVMQLRKVCN 1135

Query: 1045 HPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILE 1104
            HPYLIPGTEP+SGS EFLHEMRIKASAKLTLLH MLK+L+KEGHRVLIFSQMTKLLDILE
Sbjct: 1136 HPYLIPGTEPESGSPEFLHEMRIKASAKLTLLHLMLKILHKEGHRVLIFSQMTKLLDILE 1195

Query: 1105 DYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVI 1164
            DYL +EFGPKT+ERVDGSVSV +RQAAI RFNQDK+RFVFLLSTRSCGLGINLATADTVI
Sbjct: 1196 DYLTLEFGPKTFERVDGSVSVAERQAAIVRFNQDKTRFVFLLSTRSCGLGINLATADTVI 1255

Query: 1165 IYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKS 1224
            IYDSDFNPHADIQAMNRAHRIGQS RLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKS
Sbjct: 1256 IYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKS 1315

Query: 1225 GSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQD 1284
             SQKEVEDI+RWGTEELF +S  ++GKD    N+ +   V D+E KHR++ GGLGDVY+D
Sbjct: 1316 ESQKEVEDIIRWGTEELFGNSDSVDGKD----NSEVPGPVADVEFKHRRKTGGLGDVYED 1371

Query: 1285 KCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEWNEETTEDQAE 1344
            KC  GSTK+VWDENAI +LLDRSNL S   +  +GDL+NDMLG+VK+ +WN+E  +D   
Sbjct: 1372 KCIGGSTKLVWDENAILKLLDRSNLPSSMAESTDGDLDNDMLGTVKSIDWNDELNDDPGT 1431

Query: 1345 SP-VAAVDDASAENSERKEENAVTGIEENEWDRLLRVR 1381
            +   A +D+  +E +   ++ A    EENEWD+LLRVR
Sbjct: 1432 NEDTAPIDNDGSEQASESKQGATNRSEENEWDKLLRVR 1469


>gi|302816250|ref|XP_002989804.1| hypothetical protein SELMODRAFT_428350 [Selaginella moellendorffii]
 gi|300142370|gb|EFJ09071.1| hypothetical protein SELMODRAFT_428350 [Selaginella moellendorffii]
          Length = 2150

 Score = 1036 bits (2680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/772 (66%), Positives = 606/772 (78%), Gaps = 23/772 (2%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDERWKQPQRVISLRS 672
            E+LVKWVGKS++HN W+ ES+LK LAKRKLENYK K+GT   N+ D+RW QPQR+I+ R 
Sbjct: 557  EYLVKWVGKSHVHNEWVCESRLKTLAKRKLENYKGKHGTVPKNLVDDRWTQPQRIIARRK 616

Query: 673  SKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG 732
             +D T E  VKW  LPYDECTWE+LD   +     L DL   F  Q  + +A      R 
Sbjct: 617  GQDQTEEVLVKWYSLPYDECTWERLDTALV---PGLLDLLATF--QLFESEALSSSESRK 671

Query: 733  KGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSAC 792
              D Q  E+ A+ EQP EL+GG LFPHQ+EALNWLRKCWHK KNVILADEMGLGKT+SAC
Sbjct: 672  VKDGQ-GELEAVKEQPAELQGGQLFPHQMEALNWLRKCWHKKKNVILADEMGLGKTISAC 730

Query: 793  AFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWH 852
            AF+SSL+ EFK + PCLVLVPLSTMPNW+AEFALWAP LNV+EYHG  KARA+IRQYEW+
Sbjct: 731  AFLSSLHYEFKVRGPCLVLVPLSTMPNWMAEFALWAPGLNVIEYHGSVKARAVIRQYEWY 790

Query: 853  ASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLL 912
            AS   + +KK  +YKF V+LT YE ++ D + LR +PWE LVVDEGHRLKNSGSKLF+LL
Sbjct: 791  ASS--HGSKKQRAYKFKVMLTNYETVINDPTPLRSLPWEALVVDEGHRLKNSGSKLFTLL 848

Query: 913  NSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKL 972
            N+FSF HRVL+TGTP+QNN+GEMYNLLNFL P  FPSL++F+EKF+ L+T ++VEE++KL
Sbjct: 849  NTFSFAHRVLMTGTPMQNNLGEMYNLLNFLLPEKFPSLAAFQEKFSALSTAEQVEEIRKL 908

Query: 973  VAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSM 1032
            V PHMLRRLKKDAMQ IPPK ER+V VELS++QAEYYRA+LTKNYQ+LR   K  +QQSM
Sbjct: 909  VTPHMLRRLKKDAMQGIPPKAERVVLVELSAVQAEYYRALLTKNYQLLRQGTK--SQQSM 966

Query: 1033 LNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +NI+MQLRKVCNHPYLIPGTEP+SG+ EFLHEMRIKASAKLTLLHSML  L KEGHRVLI
Sbjct: 967  INIIMQLRKVCNHPYLIPGTEPESGTGEFLHEMRIKASAKLTLLHSMLGSLKKEGHRVLI 1026

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCG 1152
            FSQMTKLLDILEDYL  EFG  +YERVDGSV V +RQAAI R+N+D SRFVFLLSTRSCG
Sbjct: 1027 FSQMTKLLDILEDYLTFEFGHDSYERVDGSVPVAERQAAIRRYNKDTSRFVFLLSTRSCG 1086

Query: 1153 LGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKK 1212
            LGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSK+LLVYRL+VR SVEERIL LAKK
Sbjct: 1087 LGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKKLLVYRLLVRGSVEERILHLAKK 1146

Query: 1213 KLMLDQLFVNKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHR 1272
            KL L+QLF +KSGSQKE+EDIL+WG E+LF + P    K   E+      +++  ++K +
Sbjct: 1147 KLELEQLFASKSGSQKEIEDILQWGAEDLFGE-PSEKEKTSAESPPGA--SIQAQDEKPK 1203

Query: 1273 KRGGGLGDVYQDKCTE-GSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKA 1331
            K+ GGLGDVY DKC E G +K++WD+ AI RLLDR+++     D AE D E DMLGS+KA
Sbjct: 1204 KKVGGLGDVYDDKCHETGRSKVIWDDLAIKRLLDRASV---VPDSAEADGEGDMLGSIKA 1260

Query: 1332 TEWNEETTEDQA--ESPVAAVDDASAENSERKEENAVTGIEENEWDRLLRVR 1381
            + W+    E  A  E     V  + A   E K  N     E+N+W+RLLR+R
Sbjct: 1261 SAWDSTEQEHDAIEEHADQGVKGSGANAGEPKPGNE----EDNKWERLLRIR 1308



 Score =  104 bits (259), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 67/112 (59%), Gaps = 10/112 (8%)

Query: 39  LVTSESPRNTPSAKRRLKNEINADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYH 98
           +  S +P   P+A R        +  S + +G+DG ++EC++C  GGNLLCCD CPR YH
Sbjct: 217 ITRSSAPHEKPTADR--------NSPSKRTRGSDGSFFECMVCQSGGNLLCCDHCPRVYH 268

Query: 99  LQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSISKRARSKIITIKSQS 150
           L CL PPLKR P GKW+CP C  +++  KP++   +      +K +  +S+S
Sbjct: 269 LHCLSPPLKRAPTGKWRCPDCIGESE--KPLAETVAAKNTETAKEVRSESES 318



 Score = 54.3 bits (129), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 14/163 (8%)

Query: 78  CVIC-DLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSIS 136
           C  C + GG+LL C  C +++HL C+D P KR+P  +W C +C          S LDS  
Sbjct: 405 CDSCGNTGGSLLKCGRCGKSFHLLCMDAPFKRMPRSRWLCSEC----------SPLDSRK 454

Query: 137 KRARSKIITIKSQSGVKSSGADKVSQIFGNSILARKRSNKGKSVLALGVKSLEKSLDSSQ 196
           ++    I+   S    +  G  +   +   S+   +   K K  +   V + E  +   +
Sbjct: 455 RKEEQPILPAASFEVDRIVGC-RPQPLAPMSVERCETEEKNKMDVDTIVGASEGDVQDEE 513

Query: 197 VDVSCSTKPENTSAGVPVE--GSSSCPNDDDEKQLNASPTDSL 237
           VD     +PE TS    +E  G    P  D   ++   P + L
Sbjct: 514 VDGKIELEPEKTSVDEAIEDAGGGEQPEGDGIAKVELQPPEEL 556


>gi|242045708|ref|XP_002460725.1| hypothetical protein SORBIDRAFT_02g033850 [Sorghum bicolor]
 gi|241924102|gb|EER97246.1| hypothetical protein SORBIDRAFT_02g033850 [Sorghum bicolor]
          Length = 614

 Score =  984 bits (2545), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/604 (78%), Positives = 525/604 (86%), Gaps = 5/604 (0%)

Query: 783  MGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKA 842
            MGLGKTVSACAF+SSL CEFK  LPCLVLVPLSTMPNW+AEFA WAP+LNVVEYHG A++
Sbjct: 1    MGLGKTVSACAFLSSLCCEFKISLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARS 60

Query: 843  RAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLK 902
            R+IIRQYEWHA D   + K   SYKFNVLLTTYEM+L D+++LR V WEVL+VDEGHRLK
Sbjct: 61   RSIIRQYEWHAGDASQIGKTKRSYKFNVLLTTYEMVLVDAAYLRSVSWEVLIVDEGHRLK 120

Query: 903  NSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTT 962
            NS SKLFSLLNS SFQHRVLLTGTPLQNNIGEMYNLLNFLQP SFPSLSSFEEKFNDLTT
Sbjct: 121  NSSSKLFSLLNSLSFQHRVLLTGTPLQNNIGEMYNLLNFLQPTSFPSLSSFEEKFNDLTT 180

Query: 963  TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN 1022
             +KVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL+SIQAEYYRAMLTKNYQ+LRN
Sbjct: 181  AEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRN 240

Query: 1023 IGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKV 1082
            IGKG A QS+LNIVMQLRKVCNHPYLIPGTEP+SGS EFLH+MRIKASAKL LLHSMLK+
Sbjct: 241  IGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHDMRIKASAKLALLHSMLKI 300

Query: 1083 LYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSRF 1142
            L+KEGHRVLIFSQMTKLLDILEDYL +EFGPKT+ERVDGSVSV +RQAAI RFNQDK+RF
Sbjct: 301  LHKEGHRVLIFSQMTKLLDILEDYLTLEFGPKTFERVDGSVSVAERQAAIARFNQDKTRF 360

Query: 1143 VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASV 1202
            VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS RLLVYRLVVRASV
Sbjct: 361  VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASV 420

Query: 1203 EERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEE 1262
            EERILQLAKKKLMLDQLFVNKS SQKEVEDI+RWGTEELF    G +     +++     
Sbjct: 421  EERILQLAKKKLMLDQLFVNKSESQKEVEDIIRWGTEELF----GSSDSVDDKDSNEASG 476

Query: 1263 AVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLE 1322
             V D+E KHR++ GGLGDVY+DKC  GSTK+VWDENAI +LLDRSNL S   +  +GDL+
Sbjct: 477  PVADVEFKHRRKTGGLGDVYEDKCIGGSTKLVWDENAILKLLDRSNLPSSLAEGTDGDLD 536

Query: 1323 NDMLGSVKATEWNEETTEDQ-AESPVAAVDDASAENSERKEENAVTGIEENEWDRLLRVR 1381
            NDMLG+VK+ +WN+E  +D  A   +A +D+  +E +   ++ A    EENEWD+LLRVR
Sbjct: 537  NDMLGTVKSIDWNDELNDDPGANEDIAPIDNDGSEQASESKQGATNRSEENEWDKLLRVR 596

Query: 1382 LGAL 1385
              A+
Sbjct: 597  YPAI 600


>gi|115472213|ref|NP_001059705.1| Os07g0497000 [Oryza sativa Japonica Group]
 gi|113611241|dbj|BAF21619.1| Os07g0497000, partial [Oryza sativa Japonica Group]
          Length = 622

 Score =  978 bits (2528), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/601 (77%), Positives = 526/601 (87%), Gaps = 3/601 (0%)

Query: 782  EMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAK 841
            EMGLGKTVSACAF+SSL CE+K  LPCLVLVPLSTMPNW+AEFA WAP+LNVVEYHG A+
Sbjct: 1    EMGLGKTVSACAFLSSLCCEYKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSAR 60

Query: 842  ARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRL 901
            AR+IIRQYEWH  D   + K   S+KFNVLLTTYEM+L D+++LR V WEVL+VDEGHRL
Sbjct: 61   ARSIIRQYEWHEGDASQMGKIKKSHKFNVLLTTYEMVLVDAAYLRSVSWEVLIVDEGHRL 120

Query: 902  KNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLT 961
            KNS SKLFSLLN+ SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSL+SFEEKFNDLT
Sbjct: 121  KNSSSKLFSLLNTLSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNDLT 180

Query: 962  TTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILR 1021
            TT+KVEELK LVAPHMLRRLKKDAMQNIPPKTERMVPVEL+SIQAEYYRAMLTKNYQ+LR
Sbjct: 181  TTEKVEELKNLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLR 240

Query: 1022 NIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLK 1081
            NIGKG A QS+LNIVMQLRKVCNHPYLIPGTEP+SGS EFLHEMRIKASAKLTLLHSMLK
Sbjct: 241  NIGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLTLLHSMLK 300

Query: 1082 VLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR 1141
            +L+K+GHRVLIFSQMTKLLDILEDYL  EFGPKT+ERVDGSVSV +RQAAI RFNQDKSR
Sbjct: 301  ILHKDGHRVLIFSQMTKLLDILEDYLTWEFGPKTFERVDGSVSVAERQAAIARFNQDKSR 360

Query: 1142 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRAS 1201
            FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS RLLVYRLVVRAS
Sbjct: 361  FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRAS 420

Query: 1202 VEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIE 1261
            VEERIL LAKKKLMLDQLFVNKS SQKEVEDI+RWGTEELF +S  +  KD  E + + +
Sbjct: 421  VEERILHLAKKKLMLDQLFVNKSESQKEVEDIIRWGTEELFRNS-DVAVKDNNEASGA-K 478

Query: 1262 EAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDL 1321
              V ++E KH+++ GGLGDVY+D+C +GS K +WDENAI +LLDRSN+ S   +  +GDL
Sbjct: 479  NDVAEVEFKHKRKTGGLGDVYEDRCADGSAKFIWDENAITKLLDRSNVPSTVAESTDGDL 538

Query: 1322 ENDMLGSVKATEWNEETTEDQ-AESPVAAVDDASAENSERKEENAVTGIEENEWDRLLRV 1380
            +NDMLG+VK+ +WN+E  +D  A   +  +D+   E +   +++A   +EENEWD+LLRV
Sbjct: 539  DNDMLGTVKSIDWNDELNDDPGATEDIPNIDNDGCEQASEAKQDAANRVEENEWDKLLRV 598

Query: 1381 R 1381
            R
Sbjct: 599  R 599


>gi|168050295|ref|XP_001777595.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
 gi|162671080|gb|EDQ57638.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
          Length = 775

 Score =  921 bits (2380), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/730 (62%), Positives = 549/730 (75%), Gaps = 56/730 (7%)

Query: 611  SYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDERWKQPQRVISL 670
            S EFLVKW  +S+IHN W+ E +L+ +AKRKLE YK KYGT  + + D+   +PQR+++ 
Sbjct: 78   SLEFLVKWRDRSHIHNEWVSEERLRTIAKRKLEKYKLKYGTDPLILMDDECLKPQRILAT 137

Query: 671  RSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELP 730
            R  K+G+ E  VKW   PYD CTWE    P + K   L  +F +FE   + K ++     
Sbjct: 138  RVGKNGSAEVLVKWHSQPYDACTWEDKGHPVVAKNLELLQVFERFEAAAVTKTSN----- 192

Query: 731  RGKGDCQQSEIVALTEQPEELKGGA-LFPHQLEALNWLRKCWHKSKNVILADEMGLGKTV 789
                + + S I  LT QPE L+GG  LFPHQLEALNWLRK W+  K VILADEMGLGKT+
Sbjct: 193  MMTNENRPSGIEELTVQPEWLRGGGILFPHQLEALNWLRKSWYHHKKVILADEMGLGKTI 252

Query: 790  SACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQY 849
            SACAF++SLY EF+   PCLVLVPLSTM NWLAEF++WAP LNV+EYHG  KARA+IR+Y
Sbjct: 253  SACAFLASLYREFRVNAPCLVLVPLSTMSNWLAEFSVWAPFLNVIEYHGSVKARAVIREY 312

Query: 850  EWHASDPD---NLNKKTSS--YKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNS 904
            EW+++      N  K+  S   KF+V+LT+YEM+++DS+ LR +PWEVL+VDEG RLKNS
Sbjct: 313  EWYSTTTGKSGNEGKRPDSQIIKFDVMLTSYEMVISDSNQLRSIPWEVLIVDEGQRLKNS 372

Query: 905  GSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQ 964
             SKLF+LLN++ F HRVLLTGTPLQNN+ EMYNLLNFLQP +FPS  +FEEKF  L+T +
Sbjct: 373  ESKLFTLLNTYKFGHRVLLTGTPLQNNLSEMYNLLNFLQPETFPSQGAFEEKFGSLSTAE 432

Query: 965  KVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIG 1024
            +V+ELKKLVAPHMLRRLKKD MQNIPPK ER+VPVEL+ +QAEYYRA+LTKNYQ+LR +G
Sbjct: 433  QVDELKKLVAPHMLRRLKKDVMQNIPPKAERVVPVELTPVQAEYYRALLTKNYQLLRQVG 492

Query: 1025 ---KGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLK 1081
                G   QS+LNI+MQLRKVCNHPYL+PG+EP+ GS +F HEMRIKASAKLTLLHSML+
Sbjct: 493  GCKPGGQNQSLLNIMMQLRKVCNHPYLLPGSEPEGGSPKFFHEMRIKASAKLTLLHSMLR 552

Query: 1082 VLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR 1141
             L + GHRVLIFSQMTKLLDILE+Y+  EFG  +YERVDGSV V +RQ +I+RFNQD+SR
Sbjct: 553  HLKRGGHRVLIFSQMTKLLDILEEYMVFEFGAHSYERVDGSVPVAERQKSISRFNQDQSR 612

Query: 1142 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRAS 1201
            FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSK LLVYRLVVRAS
Sbjct: 613  FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKTLLVYRLVVRAS 672

Query: 1202 VEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIE 1261
            VEERILQLA+KKLML+ LF NKSGSQKEVEDI+RWGTEELF                   
Sbjct: 673  VEERILQLARKKLMLEYLFANKSGSQKEVEDIIRWGTEELFA------------------ 714

Query: 1262 EAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDL 1321
                             GD         + K++WD+ A++RLLDRS+L + + ++AEGD 
Sbjct: 715  -----------------GDT-------KAAKVIWDDVAVSRLLDRSDLATTNMEVAEGDQ 750

Query: 1322 ENDMLGSVKA 1331
              D LGS+K 
Sbjct: 751  GGDWLGSLKV 760



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 33/49 (67%), Positives = 38/49 (77%)

Query: 74  YYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQK 122
           YYY+C +C +GG LLCCD CPR YHL+CL PPLKR P GKW CP C +K
Sbjct: 6   YYYDCEVCGIGGELLCCDLCPRVYHLECLTPPLKRTPPGKWVCPTCPEK 54


>gi|302816879|ref|XP_002990117.1| hypothetical protein SELMODRAFT_131060 [Selaginella moellendorffii]
 gi|300142130|gb|EFJ08834.1| hypothetical protein SELMODRAFT_131060 [Selaginella moellendorffii]
          Length = 700

 Score =  909 bits (2350), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/635 (69%), Positives = 518/635 (81%), Gaps = 17/635 (2%)

Query: 750  ELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
            EL+GG LFPHQ+EALNWLRKCWHK KNVILADEMGLGKT+SACAF+SSL+ EFK + PCL
Sbjct: 2    ELQGGQLFPHQMEALNWLRKCWHKKKNVILADEMGLGKTISACAFLSSLHYEFKVRGPCL 61

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            VLVPLSTMPNW+AEFALWAP LNV+EYHG  KARA+IRQYEW+AS   + +KK  +YKF 
Sbjct: 62   VLVPLSTMPNWMAEFALWAPGLNVIEYHGSVKARAVIRQYEWYASS--HGSKKQRAYKFK 119

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
            V+LT YE ++ D + LR +PWE LVVDEGHRLKNSGSKLF+LLN+FSF HRVL+TGTP+Q
Sbjct: 120  VMLTNYETVINDPTPLRSLPWEALVVDEGHRLKNSGSKLFTLLNTFSFAHRVLMTGTPMQ 179

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            NN+GEMYNLLNFL P  FPSL++F+EKF+ L+T ++VEE++KLV PHMLRRLKKDAMQ I
Sbjct: 180  NNLGEMYNLLNFLLPEKFPSLAAFQEKFSALSTAEQVEEIRKLVTPHMLRRLKKDAMQGI 239

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            PPK ER+V VELS++QAEYYRA+LTKNYQ+LR   K  +QQSM+NI+MQLRKVCNHPYLI
Sbjct: 240  PPKAERVVLVELSAVQAEYYRALLTKNYQLLRQGTK--SQQSMINIIMQLRKVCNHPYLI 297

Query: 1050 PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
            PGTEP+SG+ EFLHEMRIKASAKLTLLHSML  L KEGHRVLIFSQMTKLLDILEDYL  
Sbjct: 298  PGTEPESGTGEFLHEMRIKASAKLTLLHSMLGSLKKEGHRVLIFSQMTKLLDILEDYLTF 357

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSD 1169
            EFG  +YERVDGSV V +RQAAI R+N+D SRFVFLLSTRSCGLGINLATADTVIIYDSD
Sbjct: 358  EFGHDSYERVDGSVPVAERQAAIRRYNKDTSRFVFLLSTRSCGLGINLATADTVIIYDSD 417

Query: 1170 FNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKE 1229
            FNPHADIQAMNRAHRIGQSK+LLVYRL+VR SVEERIL LAKKKL L+QLF +KSGSQKE
Sbjct: 418  FNPHADIQAMNRAHRIGQSKKLLVYRLLVRGSVEERILHLAKKKLELEQLFASKSGSQKE 477

Query: 1230 VEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTE- 1288
            +EDIL+WG E+LF + P    K   E+        +D  +K +K+ GGLGDVY DKC E 
Sbjct: 478  IEDILQWGAEDLFGEPPE-KEKTGAESPPGASTQAQD--EKPKKKVGGLGDVYDDKCHET 534

Query: 1289 GSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEWNEETTEDQA--ESP 1346
            G +K++WD+ AI RLLDR+++     D AE D E DMLGS+KA+ W+    E  A  E  
Sbjct: 535  GRSKVIWDDLAIKRLLDRASV---VPDSAEADGEGDMLGSIKASAWDSTEQEHDAIEEHA 591

Query: 1347 VAAVDDASAENSERKEENAVTGIEENEWDRLLRVR 1381
              AV  + A   E K  N     E+N+W+RLLR+R
Sbjct: 592  DQAVKGSGANAGEPKPGNE----EDNKWERLLRIR 622


>gi|356515042|ref|XP_003526210.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Glycine
            max]
          Length = 1440

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 313/677 (46%), Positives = 442/677 (65%), Gaps = 55/677 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQ-LKVLA-----KRKLENYKAKYGTTVINICDE------- 659
            ++LVKW G S +H +W+PE + LK        K K+ N+  K  +  +N  DE       
Sbjct: 132  QYLVKWKGLSYLHCTWVPEKEFLKAFKTHPRLKTKVNNFHQKMAS--VNTSDEDFVAIRP 189

Query: 660  RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE-----KLDEPALEKYSHLTDLFVQ 714
             W    R+++ R   D  RE  VKW  LPYDEC WE        +P +E+++ L     +
Sbjct: 190  EWTTVDRILACRGD-DDEREYLVKWKELPYDECYWEFESDISAFQPEIERFNRLRSRSSK 248

Query: 715  F----ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKC 770
            F    ++ ++K DA   EL +     QQ E     + PE L GG L P+QLE LN+LR  
Sbjct: 249  FSSGKQKNSVKDDA---ELKK-----QQKEFQHYEQSPEFLSGGTLHPYQLEGLNFLRFS 300

Query: 771  WHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPN 830
            W K  +VILADEMGLGKT+ + AF++SL+ E  +  P LV+ PLST+ NW  EFA WAP+
Sbjct: 301  WSKQTHVILADEMGLGKTIQSIAFLASLFKEGVS--PHLVVAPLSTLRNWEREFATWAPH 358

Query: 831  LNVVEYHGCAKARAIIRQYEWHASDPDNL-----------NKKTSSYKFNVLLTTYEMIL 879
            +NV+ Y G A+AR++IR+YE++                    K    KF+VLLT+YEMI 
Sbjct: 359  MNVLMYVGSAQARSVIREYEFYFPKKQKKIKKKKSGHLISESKQDRIKFDVLLTSYEMIN 418

Query: 880  ADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLL 939
             D++ L+ + WE ++VDEGHRLKN  SKLFS L  +S +HRVLLTGTPLQNN+ E++ L+
Sbjct: 419  FDTASLKPIKWECMIVDEGHRLKNKDSKLFSSLKQYSSRHRVLLTGTPLQNNLDELFMLM 478

Query: 940  NFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPV 999
            +FL    F SL  F+E+F D+   +++  L K++APH+LRR+KKD M+ +PPK E ++ +
Sbjct: 479  HFLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRI 538

Query: 1000 ELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSV 1059
            ELSS Q EYY+A+LT+NYQIL    +G AQ S++N+VM+LRK+C HPY++ G EPD    
Sbjct: 539  ELSSKQKEYYKAILTRNYQILTR--RGGAQISLINVVMELRKLCCHPYMLEGVEPDIDDA 596

Query: 1060 EFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
            +   +  +++S KL LL  M+  L ++GHRVLI+SQ   +LD+LEDY    +    YER+
Sbjct: 597  KEAFKQLLESSGKLQLLDKMMVKLREQGHRVLIYSQFQHMLDLLEDY--CAYKNWQYERI 654

Query: 1120 DGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DG V   +RQ  I RFN ++ SRF FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+QA
Sbjct: 655  DGKVGGAERQVRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQA 714

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----SGSQKEVEDIL 1234
            M RAHR+GQ+ ++L+YRL+ R ++EER++Q+ KKK++L+ L V +    + +Q+E++DI+
Sbjct: 715  MARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDII 774

Query: 1235 RWGTEELFNDSPGINGK 1251
            R+G++ELF D     GK
Sbjct: 775  RYGSKELFADENDEAGK 791



 Score = 41.6 bits (96), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 32/197 (16%)

Query: 45  PRNTPSAKRRLKNEINADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDP 104
           PRN+ + + +++     +RS  K+         C  C    NL+ C +C   YH +CL P
Sbjct: 31  PRNSGTTQEKIER---IERSDAKENL-------CQACGENENLVSCGTCTYAYHPKCLLP 80

Query: 105 PLKRIPNGKWQCPKCTQK-ND-------QLKPISNLDSISKRARSKIITIKSQSGVKSSG 156
           PLK      W+CP+C    ND       +++P +  D+ + +  SK I +K Q  VK  G
Sbjct: 81  PLKGPLPDNWRCPECVSPLNDIDKILDCEMRPTTAADNDATKLGSKQIFVK-QYLVKWKG 139

Query: 157 ADKVSQIFGNSILARK--RSNKGKSVLALGVKSLEK---SLDSSQVDVSCSTKPENTSAG 211
              +S +    +  ++  ++ K    L   V +  +   S+++S  D   + +PE T+  
Sbjct: 140 ---LSYLHCTWVPEKEFLKAFKTHPRLKTKVNNFHQKMASVNTSDEDF-VAIRPEWTT-- 193

Query: 212 VPVEGSSSCPNDDDEKQ 228
             V+   +C  DDDE++
Sbjct: 194 --VDRILACRGDDDERE 208


>gi|356507366|ref|XP_003522438.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Glycine
            max]
          Length = 1441

 Score =  591 bits (1523), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 312/674 (46%), Positives = 436/674 (64%), Gaps = 49/674 (7%)

Query: 613  EFLVKWVGKSNIHNSWIPESQ-LKVLA-----KRKLENYKAKYGTTVINICDE------- 659
            ++LVKW G S +H +W+PE + LK        K K+ N+  K  +  +N  DE       
Sbjct: 132  QYLVKWKGLSYLHCTWVPEKEFLKAFKTHPRLKTKVNNFHQKMAS--VNTSDEDFVAIRP 189

Query: 660  RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE-----KLDEPALEKYSHLTDLFVQ 714
             W    R+++ R   D  RE  VKW  LPYDEC WE        +P +E+++ L     +
Sbjct: 190  EWTTVDRILACRGD-DDEREYLVKWKELPYDECYWEFESDISAFQPEIERFNRLRSRSSK 248

Query: 715  FERQTLKKDASED-ELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHK 773
            F     K    +D EL +     QQ E     + PE L GG L P+QLE LN+LR  W K
Sbjct: 249  FSSSKQKNSVKDDAELKK-----QQKEFQHYEQSPEFLSGGTLHPYQLEGLNFLRFSWSK 303

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
              +VILADEMGLGKT+ + AF++SL+ E  +  P LV+ PLST+ NW  EFA WAP +NV
Sbjct: 304  QTHVILADEMGLGKTIQSIAFLASLFKEGVS--PHLVVAPLSTLRNWEREFATWAPQMNV 361

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNL-----------NKKTSSYKFNVLLTTYEMILADS 882
            + Y G A+AR +IR+YE++                    K    KF+VLLT+YEMI  D+
Sbjct: 362  LMYVGSAQARNVIREYEFYFPKKLKKIKKKKSGHLISESKQDRIKFDVLLTSYEMINFDT 421

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L+ + WE ++VDEGHRLKN  SKLFS L  +S +HRVLLTGTPLQNN+ E++ L++FL
Sbjct: 422  TSLKPIKWECMIVDEGHRLKNKDSKLFSSLKQYSSKHRVLLTGTPLQNNLDELFMLMHFL 481

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
                F SL  F+E+F D+   +++  L K++APH+LRR+KKD M+ +PPK E ++ +ELS
Sbjct: 482  DAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRIELS 541

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL 1062
            S Q EYY+A+LT+NYQIL    +G AQ S++N+VM+LRK+C HPY++ G EPD    +  
Sbjct: 542  SKQKEYYKAILTRNYQILTR--RGGAQISLINVVMELRKLCCHPYMLEGVEPDIDDAKEA 599

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
             +  +++S KL LL  M+  L ++GHRVLI+SQ   +LD+LEDY    +    YER+DG 
Sbjct: 600  FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCT--YKNWQYERIDGK 657

Query: 1123 VSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            V   +RQ  I RFN ++ SRF FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM R
Sbjct: 658  VGGAERQVRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMAR 717

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----SGSQKEVEDILRWG 1237
            AHR+GQ+ ++L+YRL+ R ++EER++Q+ KKK++L+ L V +    + +Q+E++DI+R+G
Sbjct: 718  AHRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYG 777

Query: 1238 TEELFNDSPGINGK 1251
            ++ELF D     GK
Sbjct: 778  SKELFADENDEAGK 791



 Score = 41.2 bits (95), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 22/164 (13%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQK-ND-------QLKPI 129
           C  C    NL+ C +C   YH +CL PPLK      W+CP+C    ND       +++P 
Sbjct: 54  CQACGENENLVSCGTCTYAYHPRCLLPPLKGPLPDNWRCPECVSPLNDIDKILDCEMRPT 113

Query: 130 SNLDSISKRARSKIITIKSQSGVKSSGADKVSQIFGNSILARK--RSNKGKSVLALGVKS 187
           +  D+ + +  SK I +K Q  VK  G   +S +    +  ++  ++ K    L   V +
Sbjct: 114 TAADNEATKLGSKQIFVK-QYLVKWKG---LSYLHCTWVPEKEFLKAFKTHPRLKTKVNN 169

Query: 188 LEK---SLDSSQVDVSCSTKPENTSAGVPVEGSSSCPNDDDEKQ 228
             +   S+++S  D   + +PE T+    V+   +C  DDDE++
Sbjct: 170 FHQKMASVNTSDEDF-VAIRPEWTT----VDRILACRGDDDERE 208


>gi|255548778|ref|XP_002515445.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis]
 gi|223545389|gb|EEF46894.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis]
          Length = 1470

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 325/753 (43%), Positives = 460/753 (61%), Gaps = 91/753 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQ-LKVLA-----KRKLENYKAKYGTT------VINICDER 660
            ++LVKW G S +H +W+PE + LK        + K+ N+  +  +        + I  E 
Sbjct: 131  QYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMDSNNNAEDDFVAIRPE- 189

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE-----KLDEPALEKYSHLTDLFVQF 715
            W    R+++ R   D  +E FVK+  LPYDEC WE        +P +EK++ +     + 
Sbjct: 190  WTTVDRILACRGDDD-EKEYFVKYKELPYDECYWEFESDISAFQPEIEKFNRIQSKSRKL 248

Query: 716  ER-QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKS 774
             + ++  KDA++ +  +   + QQ E     + PE L GG+L P+QLE LN+LR  W K 
Sbjct: 249  NKHKSSLKDATDSK--KKSKEFQQYE-----QSPEFLTGGSLHPYQLEGLNFLRFSWSKQ 301

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
             +VILADEMGLGKT+ + AF++SL+ E  +  P LV+ PLST+ NW  EFA WAP LNVV
Sbjct: 302  THVILADEMGLGKTIQSIAFLASLFEESLS--PHLVVAPLSTLRNWEREFATWAPQLNVV 359

Query: 835  EYHGCAKARAIIRQYEWHASDPDNL-----------NKKTSSYKFNVLLTTYEMILADSS 883
             Y G A+AR +IR+YE++                    K    KF+VLLT+YEMI  D++
Sbjct: 360  MYVGSAQARTVIREYEFYYPKSHKKIKKKKSGQVVGESKQDRIKFDVLLTSYEMINLDTT 419

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             L+ + WE ++VDEGHRLKN  SKLF  L  +S  HRVLLTGTPLQNN+ E++ L++FL 
Sbjct: 420  SLKPIKWECMIVDEGHRLKNKDSKLFLSLKQYSSNHRVLLTGTPLQNNLDELFMLMHFLD 479

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
               F SL  F+E+F D+   +++  L K++APH+LRR+KKD M  +PPK E ++ VELSS
Sbjct: 480  AGKFASLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMTELPPKKELILRVELSS 539

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLH 1063
             Q EYY+A+LT+NYQIL    +G AQ S++N+VM+LRK+C HPY++ G EPD        
Sbjct: 540  KQKEYYKAILTRNYQILTR--RGGAQISLINVVMELRKLCCHPYMLEGVEPDIQDSNESF 597

Query: 1064 EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
               +++S KL LL  M+  L ++GHRVLI+SQ   +LD+LEDY    +    YER+DG V
Sbjct: 598  RQLVESSGKLQLLDKMMVRLKEQGHRVLIYSQFQHMLDLLEDYCT--YKKWQYERIDGKV 655

Query: 1124 SVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
               +RQ  I RFN ++ SRF FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM RA
Sbjct: 656  GGAERQVRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARA 715

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----SGSQKEVEDILRWGT 1238
            HR+GQ+ ++++YRL+ R ++EER++Q+ KKK++L+ L V +    + +Q+E++DI+R+G+
Sbjct: 716  HRLGQTNKVMIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYGS 775

Query: 1239 EELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDEN 1298
            +ELF D     GK                                      S +I +D+ 
Sbjct: 776  KELFADENDEAGK--------------------------------------SRQIHYDDT 797

Query: 1299 AIARLLDRSNLQSGSTDLAEGDLENDMLGSVKA 1331
            AI RLLDR   Q G  + +  D E D  G +KA
Sbjct: 798  AIDRLLDRE--QVGEEEASVDDEEED--GFLKA 826



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 20/163 (12%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQK-ND-------QLKPI 129
           C  C   G+LL C++C  +YH +CL PP+K      W+CP+C    ND       +++P 
Sbjct: 53  CQSCGENGDLLSCETCTYSYHPKCLLPPIKATLPSNWRCPECVSPLNDIDKILDCEMRPT 112

Query: 130 SNLDSISKRARSKIITIKSQSGVKSSGADKVSQIFGNSILARK--RSNKGKSVLALGVKS 187
              D+   +  SK I +K Q  VK  G   +S +    +  ++  ++ K    L   V +
Sbjct: 113 VAGDNDVSKLGSKQIFVK-QYLVKWKG---LSYLHCTWVPEKEFLKAFKSNPRLRTKVNN 168

Query: 188 LEKSLDSSQ--VDVSCSTKPENTSAGVPVEGSSSCPNDDDEKQ 228
             + +DS+    D   + +PE T+    V+   +C  DDDEK+
Sbjct: 169 FHRQMDSNNNAEDDFVAIRPEWTT----VDRILACRGDDDEKE 207


>gi|359475843|ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Vitis
            vinifera]
          Length = 1472

 Score =  577 bits (1488), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 337/808 (41%), Positives = 475/808 (58%), Gaps = 102/808 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQ-LKVLA-----KRKLENYKAKYGTTVINICDE------- 659
            ++LVKW G S +H +W+PE + +K        K K+ N+  +  +   N  +E       
Sbjct: 132  QYLVKWKGLSYLHCTWVPEKEFIKAFKTHPRLKTKVNNFNRQMASN--NNSEEDFVAVRP 189

Query: 660  RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE-----KLDEPALEKYSHLTDLFVQ 714
             W    R+I+ R + D  RE  VKW  L YDEC WE        +P +E+++ +     +
Sbjct: 190  EWTTVDRIIACRGNDD-EREYLVKWKELSYDECYWEFESDISAFQPEIERFNKIQSRSRK 248

Query: 715  FERQTLK---KDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCW 771
                  K   +D S+ +        +Q E       PE L GG+L P+QLE LN+LR  W
Sbjct: 249  LSSSKQKVTIRDISDSKR-------KQREFQQFEHSPEFLSGGSLHPYQLEGLNFLRFSW 301

Query: 772  HKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNL 831
             K  +VILADEMGLGKT+ + AF++SL+ E  +  P LV+ PLST+ NW  EFA WAP +
Sbjct: 302  GKQTHVILADEMGLGKTIQSIAFLASLFEENVS--PHLVVAPLSTLRNWEREFATWAPQM 359

Query: 832  NVVEYHGCAKARAIIRQYEWHASDPDNL-----------NKKTSSYKFNVLLTTYEMILA 880
            NVV Y G + AR++IR YE++                    K    KF+VLLT+YEMI  
Sbjct: 360  NVVMYVGSSHARSVIRDYEFYFPKSHKKIKKKKSGQIVTESKQDRIKFDVLLTSYEMINL 419

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            DS+ L+ + WE ++VDEGHRLKN  SKLF  L  +  +HRVLLTGTPLQNN+ E++ L++
Sbjct: 420  DSASLKPIKWECMIVDEGHRLKNKDSKLFLSLKQYLSKHRVLLTGTPLQNNLDELFMLMH 479

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
            FL    F SL  F+E+F D+   +++  L K++APH+LRR+KKD M+ +PPK E ++ VE
Sbjct: 480  FLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVE 539

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            LSS Q EYY+A+LT+NYQIL    +G AQ S++N+VM+LRK+C HPY++ G EPD     
Sbjct: 540  LSSKQKEYYKAILTRNYQILTR--RGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDAT 597

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
              +++ +++S KL LL  M+  L ++GHRVLI+SQ   +LD+LEDY    +    YER+D
Sbjct: 598  EAYKLLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCT--YKKWQYERID 655

Query: 1121 GSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G V   +RQ  I RFN ++ SRF FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM
Sbjct: 656  GKVGGAERQVRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAM 715

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----SGSQKEVEDILR 1235
             RAHR+GQ+ ++L+YRL+ R ++EER++Q+ KKK++L+ L V +    + +Q+E++DI+R
Sbjct: 716  ARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIR 775

Query: 1236 WGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVW 1295
            +G++ELF D     GK                                      S +I +
Sbjct: 776  YGSKELFADENDEAGK--------------------------------------SRQIHY 797

Query: 1296 DENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATE-WNEETTEDQAESPVAAVDDAS 1354
            D+ AI RLLDR   Q G  +    D E+D  G +KA +  N E  ++        V  A 
Sbjct: 798  DDAAIDRLLDRE--QVGDEEATLDDDEDD--GFLKAFKVANFEYIDEVEAVVEEEVQKAP 853

Query: 1355 AENSERKEENAVTGIEENE-WDRLLRVR 1381
             EN     + AV   E    W+ LLR R
Sbjct: 854  VEN-----KAAVNNSERTSYWEELLRDR 876



 Score = 46.6 bits (109), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQK-ND-------QLKPI 129
           C  C   GNLL C++C   YH +CL PPLK      W+CP+C    ND       +++P 
Sbjct: 54  CQACGESGNLLSCETCTYAYHPKCLLPPLKAPLPSNWRCPQCVSPLNDIDKILDCEMRPT 113

Query: 130 SNLDSISKRARSKIITIKSQSGVKSSG 156
              DS + +  SK I +K Q  VK  G
Sbjct: 114 VAGDSDASKLGSKQIFVK-QYLVKWKG 139


>gi|296082077|emb|CBI21082.3| unnamed protein product [Vitis vinifera]
          Length = 1356

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 339/808 (41%), Positives = 478/808 (59%), Gaps = 102/808 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQ-LKVLA-----KRKLENYKAKYGTTVINICDE------- 659
            ++LVKW G S +H +W+PE + +K        K K+ N+  +  +   N  +E       
Sbjct: 132  QYLVKWKGLSYLHCTWVPEKEFIKAFKTHPRLKTKVNNFNRQMASN--NNSEEDFVAVRP 189

Query: 660  RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE-----KLDEPALEKYSHLTDLFVQ 714
             W    R+I+ R + D  RE  VKW  L YDEC WE        +P +E+++ +     +
Sbjct: 190  EWTTVDRIIACRGNDD-EREYLVKWKELSYDECYWEFESDISAFQPEIERFNKIQSRSRK 248

Query: 715  FERQTLK---KDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCW 771
                  K   +D S+ +  R + + QQ E       PE L GG+L P+QLE LN+LR  W
Sbjct: 249  LSSSKQKVTIRDISDSK--RKQREFQQFE-----HSPEFLSGGSLHPYQLEGLNFLRFSW 301

Query: 772  HKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNL 831
             K  +VILADEMGLGKT+ + AF++SL+ E  +  P LV+ PLST+ NW  EFA WAP +
Sbjct: 302  GKQTHVILADEMGLGKTIQSIAFLASLFEENVS--PHLVVAPLSTLRNWEREFATWAPQM 359

Query: 832  NVVEYHGCAKARAIIRQYEWHASDPDNL-----------NKKTSSYKFNVLLTTYEMILA 880
            NVV Y G + AR++IR YE++                    K    KF+VLLT+YEMI  
Sbjct: 360  NVVMYVGSSHARSVIRDYEFYFPKSHKKIKKKKSGQIVTESKQDRIKFDVLLTSYEMINL 419

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            DS+ L+ + WE ++VDEGHRLKN  SKLF  L  +  +HRVLLTGTPLQNN+ E++ L++
Sbjct: 420  DSASLKPIKWECMIVDEGHRLKNKDSKLFLSLKQYLSKHRVLLTGTPLQNNLDELFMLMH 479

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
            FL    F SL  F+E+F D+   +++  L K++APH+LRR+KKD M+ +PPK E ++ VE
Sbjct: 480  FLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVE 539

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            LSS Q EYY+A+LT+NYQIL    +G AQ S++N+VM+LRK+C HPY++ G EPD     
Sbjct: 540  LSSKQKEYYKAILTRNYQILTR--RGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDAT 597

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
              +++ +++S KL LL  M+  L ++GHRVLI+SQ   +LD+LEDY    +    YER+D
Sbjct: 598  EAYKLLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCT--YKKWQYERID 655

Query: 1121 GSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G V   +RQ  I RFN ++ SRF FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM
Sbjct: 656  GKVGGAERQVRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAM 715

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----SGSQKEVEDILR 1235
             RAHR+GQ+ ++L+YRL+ R ++EER++Q+ KKK++L+ L V +    + +Q+E++DI+R
Sbjct: 716  ARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIR 775

Query: 1236 WGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVW 1295
            +G++ELF D     GK                                      S +I +
Sbjct: 776  YGSKELFADENDEAGK--------------------------------------SRQIHY 797

Query: 1296 DENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATE-WNEETTEDQAESPVAAVDDAS 1354
            D+ AI RLLDR   Q G  +    D E+D  G +KA +  N E  ++        V  A 
Sbjct: 798  DDAAIDRLLDRE--QVGDEEATLDDDEDD--GFLKAFKVANFEYIDEVEAVVEEEVQKAP 853

Query: 1355 AENSERKEENAVTGIEENE-WDRLLRVR 1381
             EN     + AV   E    W+ LLR R
Sbjct: 854  VEN-----KAAVNNSERTSYWEELLRDR 876



 Score = 46.6 bits (109), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQK-ND-------QLKPI 129
           C  C   GNLL C++C   YH +CL PPLK      W+CP+C    ND       +++P 
Sbjct: 54  CQACGESGNLLSCETCTYAYHPKCLLPPLKAPLPSNWRCPQCVSPLNDIDKILDCEMRPT 113

Query: 130 SNLDSISKRARSKIITIKSQSGVKSSG 156
              DS + +  SK I +K Q  VK  G
Sbjct: 114 VAGDSDASKLGSKQIFVK-QYLVKWKG 139


>gi|357466053|ref|XP_003603311.1| Chromatin remodeling complex subunit [Medicago truncatula]
 gi|355492359|gb|AES73562.1| Chromatin remodeling complex subunit [Medicago truncatula]
          Length = 1483

 Score =  574 bits (1479), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 303/642 (47%), Positives = 419/642 (65%), Gaps = 37/642 (5%)

Query: 613  EFLVKWVGKSNIHNSWIPESQ-LKVLA-----KRKLENYKAKYGTTVINICDE------- 659
            ++LVKW G S +H +W+PE + LK        K K+ N+  +  ++  N  DE       
Sbjct: 135  QYLVKWKGLSYLHCAWVPEKEFLKAFKSHPRLKTKVNNFHRQMASS--NTSDEDFVAIRP 192

Query: 660  RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             W    R+I+ R   D  RE  VKW  LPYDEC WE   E  +  +    + F +F R  
Sbjct: 193  EWTTVDRIIACRGDND-EREYLVKWKELPYDECYWES--ESDISAFQPEIERFNRF-RSR 248

Query: 720  LKKDASEDELPRGKGDC----QQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSK 775
              K AS  +  R   D     QQ E       PE L GG+L P+QLE LN+LR  W K  
Sbjct: 249  SSKLASIKQQSRVNDDNELKKQQKEFHQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQT 308

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            +VILADEMGLGKT+ + AF++SL+ E  +  P LV+ PLST+ NW  EFA WAP +NV+ 
Sbjct: 309  HVILADEMGLGKTIQSIAFLASLFEEGVSAHPHLVVAPLSTLRNWEREFATWAPQMNVIM 368

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSY---------KFNVLLTTYEMILADSSHLR 886
            Y G A+AR++IR+YE++       NKK  S          KF+VLLT+YEMI  D++ L+
Sbjct: 369  YVGSAQARSVIREYEFYFPKKLKKNKKKKSLVSESKHDRIKFDVLLTSYEMINLDTTSLK 428

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
             + WE ++VDEGHRLKN  SKLFS L  +S +HRVLLTGTPLQNN+ E++ L++FL    
Sbjct: 429  PIKWECMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGK 488

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQA 1006
            F SL  F+E+F D+   +++  L K++APH+LRR+KKD M+ +PPK E ++ V+LSS Q 
Sbjct: 489  FASLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVDLSSKQK 548

Query: 1007 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMR 1066
            EYY+A+LT+NYQIL    +G AQ S++N+VM+LRK+C H Y++ G EPD    +   +  
Sbjct: 549  EYYKAILTRNYQILTR--RGGAQISLINVVMELRKLCCHAYMLEGVEPDIDDPKEAFKQL 606

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVG 1126
            +++S KL LL  M+  L ++GHRVLI+SQ   +LD+LEDY +  +    YER+DG V   
Sbjct: 607  LESSGKLHLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCS--YKKWHYERIDGKVGGA 664

Query: 1127 DRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1185
            +RQ  I RFN ++ SRF FLLSTR+ GLGINLATADTV+IYDSD+NPHAD+QAM RAHR+
Sbjct: 665  ERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARAHRL 724

Query: 1186 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQ 1227
            GQ+ ++L+YRL+ R ++EER++Q+ KKK++L+ L V +  +Q
Sbjct: 725  GQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQ 766



 Score = 50.8 bits (120), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 6/58 (10%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSI 135
           C  C   G+LL C +C   YH  CL PPLK      W+CP+C      + P+ ++D +
Sbjct: 53  CQACGESGDLLSCATCNYAYHSSCLLPPLKGPAPDNWRCPEC------VTPLIDIDKL 104


>gi|431906391|gb|ELK10588.1| Chromodomain-helicase-DNA-binding protein 5 [Pteropus alecto]
          Length = 1842

 Score =  573 bits (1478), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 354/872 (40%), Positives = 491/872 (56%), Gaps = 121/872 (13%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP+V     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 381  EPSVPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 439

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 440  PFDYGSGDEDSKSEKRKSKDPLYAKMEERFYRYGIKPEWMTIHRILNHSFDKKGDVHYLI 499

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA----------------SE 726
            KW  LPYD+CTWE +D+  +  Y +L   +       L +DA                 +
Sbjct: 500  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLIKKSKKLKDDKQ 558

Query: 727  DELP--------RGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKN 776
            ++ P        RG G       V   +QP  +   GG L P+QLE LNWLR  W +  +
Sbjct: 559  EKPPDTPVVDVSRGGGS---GPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTD 615

Query: 777  VILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
             ILADEMGLGKTV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y
Sbjct: 616  TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY 675

Query: 837  HGCAKARAIIRQYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVP 889
             G  ++R++IR+ E+   D    +       KK    KF+VLLT+YE+I  D + L  + 
Sbjct: 676  TGDKESRSVIRENEFSFEDNAVRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE 735

Query: 890  WEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPS 949
            W  LVVDE HRLKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +
Sbjct: 736  WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN 795

Query: 950  LSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYY 1009
            L  F E+F D++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY
Sbjct: 796  LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY 855

Query: 1010 RAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP--GTEPDSGSVEFLHEMRI 1067
            + +LT+N++ L + G G  Q S+LNI+M L+K CNHPYL P     P   +  +     +
Sbjct: 856  KFILTRNFEALNSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVAPVLPNGSYDGSSLV 914

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            K+S KL LL  MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G 
Sbjct: 915  KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGL 972

Query: 1128 RQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQ AI RFN   + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIG
Sbjct: 973  RQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIG 1032

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTE 1239
            Q+K++++YR V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTE
Sbjct: 1033 QNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTE 1092

Query: 1240 ELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEG 1289
            ELF D       D+    +  +  +  +      RGG L    +          +K  E 
Sbjct: 1093 ELFKD-------DVEGMVSQGQRPITPIPDVQSSRGGALAASMKKKHGSTPPGDNKDVED 1145

Query: 1290 STKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPV 1347
            S+ I +D+ AI++LLDR+     +TD  E    N+ L S K  ++   EE   ++ E  +
Sbjct: 1146 SSVIHYDDAAISKLLDRNQ---DATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREI 1202

Query: 1348 AAVDDASAENSERKEENAVTGIEENEWDRLLR 1379
                        ++EEN    ++ + W++LLR
Sbjct: 1203 I-----------KQEEN----VDPDYWEKLLR 1219


>gi|403420600|ref|NP_001258155.1| chromodomain-helicase-DNA-binding protein 5 [Rattus norvegicus]
          Length = 1948

 Score =  573 bits (1476), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 353/846 (41%), Positives = 484/846 (57%), Gaps = 109/846 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            EF VKW G S  H SW+ E QL++       NY+ K          YG+           
Sbjct: 508  EFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRK 567

Query: 652  ---TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                +    +ER         W    R+++    K G     +KW  LPYD+CTWE +DE
Sbjct: 568  NKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFDKKGDVHYLIKWKDLPYDQCTWE-IDE 626

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK------- 752
              +  Y +L   +       L +DA    LP+      +       E+P +         
Sbjct: 627  IDIPYYDNLKQTYWGHRELMLGEDA---RLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVK 683

Query: 753  -----------GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCE 801
                       GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E
Sbjct: 684  FDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKE 743

Query: 802  FKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN- 860
              +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D      
Sbjct: 744  GHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRGG 803

Query: 861  ------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNS 914
                  KK    KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS
Sbjct: 804  KKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 863

Query: 915  FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVA 974
            +   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ 
Sbjct: 864  YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLG 923

Query: 975  PHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLN 1034
            PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LN
Sbjct: 924  PHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLN 982

Query: 1035 IVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVL 1091
            I+M L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L  EGHRVL
Sbjct: 983  IMMDLKKCCNHPYLFPVAAVEAPMLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVL 1042

Query: 1092 IFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRS 1150
            IFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+
Sbjct: 1043 IFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRA 1100

Query: 1151 CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLA 1210
             GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+A
Sbjct: 1101 GGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVA 1160

Query: 1211 KKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGING-KDMGENNTSIEE 1262
            K+K+ML  L V     +KSGS  ++E++DIL++GTEELF D   + G    G+  T+   
Sbjct: 1161 KRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD--VEGMMSQGQRPTTPIP 1218

Query: 1263 AVR-----DLEQKHRKRGGGL--GDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTD 1315
             V+      L    +K+ GG   GD   +K  E S+ I +D+ AI++LLDR+   +  T+
Sbjct: 1219 DVQSTKGGSLAAGAKKKHGGTPPGD---NKDVEDSSVIHYDDAAISKLLDRNQDATDDTE 1275

Query: 1316 LAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIEENE 1373
            L      N+ L S K  ++   EE   ++ E  V            ++EEN    ++ + 
Sbjct: 1276 LQN---MNEYLSSFKVAQYVVREEDGVEEVEREVI-----------KQEEN----VDPDY 1317

Query: 1374 WDRLLR 1379
            W++LLR
Sbjct: 1318 WEKLLR 1323



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 417 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 459



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 331 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 390

Query: 125 QLKP 128
           Q +P
Sbjct: 391 QWEP 394


>gi|356562107|ref|XP_003549315.1| PREDICTED: uncharacterized protein LOC100779829 [Glycine max]
          Length = 2586

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 309/664 (46%), Positives = 434/664 (65%), Gaps = 43/664 (6%)

Query: 613  EFLVKWVGKSNIHNSWIPESQ-LKVLA-----KRKLENYKAKYGTT------VINICDER 660
            ++LVKW G S +H +W+PE + LK        K K+ N+     +        + I  E 
Sbjct: 1330 QYLVKWKGLSYLHCTWVPEEEFLKAFKNHPGLKTKINNFHRHIASANNPNEDFVAIRPE- 1388

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE-KLDEPALEKYSHLTDLFVQFERQT 719
            W    R+++ R   D  +E  VKW  LPYDEC WE K D  A +      + F    R+ 
Sbjct: 1389 WTMVDRILACRGHDD-KKEYLVKWKELPYDECYWELKSDISAFQTEIERFNTFKSRSRKL 1447

Query: 720  L---KKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKN 776
            L   KK + ED+    K   QQ E +      + L GGAL  +QLE LN+LR  W+K  +
Sbjct: 1448 LSSKKKRSVEDDAELNK---QQKEFLQYEHSLQFLSGGALHSYQLEGLNFLRFSWYKQTH 1504

Query: 777  VILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
            VILADEMGLGKT+ + AF++SL+ E  +  P LV+ PLST+ NW  EFA WAP +NVV Y
Sbjct: 1505 VILADEMGLGKTIQSIAFLASLFEENVS--PHLVVAPLSTLRNWEREFATWAPQMNVVMY 1562

Query: 837  HGCAKARAIIRQYEWHASDPDNLNKKTSS-----------YKFNVLLTTYEMILADSSHL 885
             G AKARA IR+YE++        KK  S            KF+VLLT+YE+I +D+S L
Sbjct: 1563 FGSAKARAFIREYEFYFPKNQKRIKKKKSRQIVNESKQERIKFDVLLTSYEIINSDTSSL 1622

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
            + + WE ++VDEGHRLKN  SKLFS L  +S +HRVLLTGTPLQNN+ E++ L++FL   
Sbjct: 1623 KHIKWECMIVDEGHRLKNKDSKLFSSLKQYSSKHRVLLTGTPLQNNLDELFMLMHFLDAG 1682

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
             F SL  F+E+F D+   +++  L K++APH+LRRLKKD M+ +PPK E ++ VEL S Q
Sbjct: 1683 KFGSLEEFQEEFKDINREEQILRLHKMLAPHLLRRLKKDVMKELPPKKELILRVELCSKQ 1742

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEM 1065
             EYY+A+LT+NYQIL +  +G A  S++N+VM+LRK+C HPY++ G +PD    +  ++ 
Sbjct: 1743 KEYYKAILTRNYQILTH--QGGAHISLINVVMELRKLCCHPYMLQGVQPDLKDEKESYKQ 1800

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             +++S KL LL  M+  L ++GHRVLI+SQ   +LD+LEDY    +    YER+DG V  
Sbjct: 1801 FLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDY--CVYKHWQYERIDGKVGG 1858

Query: 1126 GDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
             +RQ  I RFN ++ SRF F+LSTR+ GLGINL TADTVIIYDSD+NPHAD+QAM RAHR
Sbjct: 1859 AERQVRIDRFNAKNSSRFCFILSTRAGGLGINLTTADTVIIYDSDWNPHADLQAMARAHR 1918

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN----KSGSQKEVEDILRWGTEE 1240
            +GQ+ ++++YRL+ R ++EER++Q+ KKK++L+ L V     ++ +Q+E++DI+R+G++E
Sbjct: 1919 LGQTNKVMIYRLITRGTIEERMIQITKKKMVLEHLVVGSLKAQNINQEELDDIVRYGSKE 1978

Query: 1241 LFND 1244
            LF D
Sbjct: 1979 LFAD 1982


>gi|149024737|gb|EDL81234.1| rCG30890, isoform CRA_a [Rattus norvegicus]
          Length = 1668

 Score =  570 bits (1470), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 359/865 (41%), Positives = 492/865 (56%), Gaps = 114/865 (13%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP +     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 220  EPGMPPPRPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 278

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 279  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFDKKGDVHYLI 338

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIV 742
            KW  LPYD+CTWE +DE  +  Y +L   +       L +DA    LP+      +    
Sbjct: 339  KWKDLPYDQCTWE-IDEIDIPYYDNLKQTYWGHRELMLGEDA---RLPKRLVKKGKKLKD 394

Query: 743  ALTEQPEELK------------------GGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
               E+P +                    GG L P+QLE LNWLR  W +  + ILADEMG
Sbjct: 395  DKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG 454

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKTV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R+
Sbjct: 455  LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 514

Query: 845  IIRQYEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            +IR+ E+  S  DN           KK    KF+VLLT+YE+I  D + L  + W  LVV
Sbjct: 515  VIRENEF--SFEDNAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVV 572

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E
Sbjct: 573  DEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLE 632

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
            +F D++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+
Sbjct: 633  EFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 692

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAK 1072
            N++ L + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S K
Sbjct: 693  NFEALNSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPMLPNGSYDGSSLVKSSGK 751

Query: 1073 LTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAI 1132
            L LL  MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI
Sbjct: 752  LMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAI 809

Query: 1133 TRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRL 1191
             RFN   + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++
Sbjct: 810  DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 869

Query: 1192 LVYRLVVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFND 1244
            ++YR V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D
Sbjct: 870  MIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD 929

Query: 1245 SPGING-KDMGENNTSIEEAVR-----DLEQKHRKRGGGL--GDVYQDKCTEGSTKIVWD 1296
               + G    G+  T+    V+      L    +K+ GG   GD   +K  E S+ I +D
Sbjct: 930  D--VEGMMSQGQRPTTPIPDVQSTKGGSLAAGAKKKHGGTPPGD---NKDVEDSSVIHYD 984

Query: 1297 ENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDAS 1354
            + AI++LLDR+     +TD  E    N+ L S K  ++   EE   ++ E  V       
Sbjct: 985  DAAISKLLDRNQ---DATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREVI------ 1035

Query: 1355 AENSERKEENAVTGIEENEWDRLLR 1379
                 ++EEN    ++ + W++LLR
Sbjct: 1036 -----KQEEN----VDPDYWEKLLR 1051



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 145 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 187



 Score = 75.1 bits (183), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 59  DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 118

Query: 125 QLKP 128
           Q +P
Sbjct: 119 QWEP 122


>gi|449455537|ref|XP_004145509.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Cucumis
            sativus]
          Length = 1474

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 325/784 (41%), Positives = 470/784 (59%), Gaps = 88/784 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQ-LKVLA-----KRKLENYKAKYGTTVINICDE------- 659
            ++LVKW G S +H +W+PE   +K        K K+ N+  +   ++ N  +E       
Sbjct: 132  QYLVKWKGLSYLHCTWVPEKDFIKAFKTHPRLKTKVNNFHKQ--MSLNNNAEEDFVAIRP 189

Query: 660  RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             W    R+++ R + D  +E  VK+  L YDEC WE   E  +  +    D F + + ++
Sbjct: 190  EWTTVDRILACRGN-DEEKEYLVKYKELSYDECYWEF--ESDISAFQPEIDKFHKIQSKS 246

Query: 720  LKKDASEDELPRGK-GDCQ--QSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKN 776
             K+ +++++   G  G+ +  Q E       P+ L GG L P+QLE LN+LR  W K  +
Sbjct: 247  RKQFSNKNKSSHGDFGEVKKKQKEFQQYDSSPQFLSGGTLHPYQLEGLNFLRYSWSKQTH 306

Query: 777  VILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
            VILADEMGLGKT+ + AF++SLY E  A  P LV+ PLST+ NW  EFA WAP++NVV Y
Sbjct: 307  VILADEMGLGKTIQSIAFLASLYEENIA--PHLVVAPLSTLRNWEREFATWAPHMNVVMY 364

Query: 837  HGCAKARAIIRQYEWHASDPDNL-----------NKKTSSYKFNVLLTTYEMILADSSHL 885
             G A+AR +IR+YE++                    K    KF+VLLT+YEMI  D   L
Sbjct: 365  VGTAQARTVIREYEFYFPKNHKKVKKKKSGQIVSESKQDRIKFDVLLTSYEMINFDVGTL 424

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
            + + W+ L+VDEGHRLKN  SKLFS L  FS   RVLLTGTPLQNN+ E++ L++FL   
Sbjct: 425  KPIKWQSLIVDEGHRLKNKDSKLFSSLKQFSSSLRVLLTGTPLQNNLDELFMLMHFLDAG 484

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
             F SL  F+E+F D+   +++  L +++APH+LRR+KKD M+++PPK E ++ VELSS Q
Sbjct: 485  KFASLEEFQEEFRDINQEEQILRLHRMLAPHLLRRVKKDVMKDLPPKKELILRVELSSKQ 544

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEM 1065
             EYY+A+LT+NYQ+L    +G AQ S++N+VM+LRK+C H Y++ G EPD    E  ++ 
Sbjct: 545  KEYYKAILTRNYQLLTR--RGGAQISLINVVMELRKLCCHAYMLEGVEPDIEDPEEAYKQ 602

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             ++ S KL LL  M+  L ++GHRVLI++Q   +LD+LEDY +  +    YER+DG V  
Sbjct: 603  LLETSGKLHLLDKMMVRLKEQGHRVLIYTQFQHMLDLLEDYCS--YKKWQYERIDGKVCG 660

Query: 1126 GDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
             +RQ  I RFN ++ SRF FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM RAHR
Sbjct: 661  AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----SGSQKEVEDILRWGTEE 1240
            +GQ+ ++++YRLV R ++EER++Q+ KKK++L+ L V +    + +Q+E++DI+R+G++E
Sbjct: 721  LGQTNKVMIYRLVTRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYGSKE 780

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAI 1300
            LF D     GK                                      S +I +D+ AI
Sbjct: 781  LFADENDEAGK--------------------------------------SRQIHYDDAAI 802

Query: 1301 ARLLDRSNL--QSGSTDLAEGDLENDMLGSVKAT--EWNEETTEDQAESPVAAVDDASAE 1356
             RLLDR  +  +  + D  E D   + L + K    E+ +E   ++A    +      A 
Sbjct: 803  DRLLDRDQVRDEEATVDDEEDD---EFLKAFKVANFEYIDEVEAEEAAKRASMGSQPVAS 859

Query: 1357 NSER 1360
            N ER
Sbjct: 860  NVER 863



 Score = 55.1 bits (131), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 6/58 (10%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSI 135
           C  C    NLL C++C   YH +CL PPLK      W+CP+C      + P+S++D I
Sbjct: 54  CQTCGESENLLSCETCTYDYHPKCLIPPLKAPLPSNWRCPEC------VSPLSDIDKI 105


>gi|148682990|gb|EDL14937.1| mCG131426 [Mus musculus]
          Length = 1955

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 355/869 (40%), Positives = 490/869 (56%), Gaps = 122/869 (14%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP +     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 505  EPGMPPPRPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 563

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 564  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFDKKGDIHYLI 623

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIV 742
            KW  LPYD+CTWE +DE  +  Y +L   +       L +DA    LP+      +    
Sbjct: 624  KWKDLPYDQCTWE-IDEIDIPYYDNLKQAYWGHRELMLGEDA---RLPKRLVKKGKKLKD 679

Query: 743  ALTEQPEELK------------------GGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
               E+P +                    GG L P+QLE LNWLR  W +  + ILADEMG
Sbjct: 680  DKQEKPPDTPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG 739

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKTV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R+
Sbjct: 740  LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 799

Query: 845  IIRQYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            +IR+ E+   D            KK    KF+VLLT+YE+I  D + L  + W  LVVDE
Sbjct: 800  VIRENEFSFEDNAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDE 859

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F
Sbjct: 860  AHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF 919

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             D++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N+
Sbjct: 920  ADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 979

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLT 1074
            + L + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL 
Sbjct: 980  EALNSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLM 1038

Query: 1075 LLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITR 1134
            LL  MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI R
Sbjct: 1039 LLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDR 1096

Query: 1135 FNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            FN   + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++
Sbjct: 1097 FNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMI 1156

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSP 1246
            YR V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D  
Sbjct: 1157 YRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD- 1215

Query: 1247 GING-KDMGENNTSIEEAVRDLEQKHRKRGGGL-------------GDVYQDKCTEGSTK 1292
             + G    G+  T+    + D++     +GG L             GD   +K  E S+ 
Sbjct: 1216 -VEGMMSQGQRPTT---PIPDIQS---TKGGSLTAGAKKKHGSTPPGD---NKDVEDSSV 1265

Query: 1293 IVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAV 1350
            I +D+ AI++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  V   
Sbjct: 1266 IHYDDAAISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREVI-- 1320

Query: 1351 DDASAENSERKEENAVTGIEENEWDRLLR 1379
                     ++EEN    ++ + W++LLR
Sbjct: 1321 ---------KQEEN----VDPDYWEKLLR 1336



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 430 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 472



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 344 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 403

Query: 125 QLKP 128
           Q +P
Sbjct: 404 QWEP 407


>gi|345800756|ref|XP_546747.3| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Canis lupus
            familiaris]
          Length = 1986

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 350/865 (40%), Positives = 486/865 (56%), Gaps = 114/865 (13%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP V     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 531  EPGVPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 589

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 590  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLI 649

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIV 742
            KW  LPYD+CTWE +D+  +  Y +L   +       L +DA    LP+      +    
Sbjct: 650  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDA---RLPKRLVKKGKKLKD 705

Query: 743  ALTEQPEELK------------------GGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
               E+P +                    GG L P+QLE LNWLR  W +  + ILADEMG
Sbjct: 706  DKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG 765

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKTV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R+
Sbjct: 766  LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 825

Query: 845  IIRQYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            +IR+ E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE
Sbjct: 826  VIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDE 885

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F
Sbjct: 886  AHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF 945

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             D++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N+
Sbjct: 946  ADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 1005

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLT 1074
            + L + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL 
Sbjct: 1006 EALNSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLM 1064

Query: 1075 LLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITR 1134
            LL  MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI R
Sbjct: 1065 LLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDR 1122

Query: 1135 FNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            FN   + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++
Sbjct: 1123 FNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMI 1182

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSP 1246
            YR V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D  
Sbjct: 1183 YRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD-- 1240

Query: 1247 GINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWD 1296
                 D+    +  +  V  +      +GG L    +          +K  E S+ I +D
Sbjct: 1241 -----DVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYD 1295

Query: 1297 ENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDAS 1354
            + AI++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +       
Sbjct: 1296 DAAISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII------ 1346

Query: 1355 AENSERKEENAVTGIEENEWDRLLR 1379
                 ++EEN    ++ + W++LLR
Sbjct: 1347 -----KQEEN----VDPDYWEKLLR 1362



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 456 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 498



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 370 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 429

Query: 125 QLKP 128
           Q +P
Sbjct: 430 QWEP 433


>gi|338722190|ref|XP_001492263.3| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Equus
            caballus]
          Length = 1930

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 350/865 (40%), Positives = 486/865 (56%), Gaps = 114/865 (13%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP V     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 470  EPGVPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 528

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 529  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYSIKPEWMMIHRILNHSFDKKGDVHYLI 588

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIV 742
            KW  LPYD+CTWE +D+  +  Y +L   +       L +DA    LP+      +    
Sbjct: 589  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDA---RLPKRLVKKGKKLKD 644

Query: 743  ALTEQPEELK------------------GGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
               E+P +                    GG L P+QLE LNWLR  W +  + ILADEMG
Sbjct: 645  DKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG 704

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKTV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R+
Sbjct: 705  LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 764

Query: 845  IIRQYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            +IR+ E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE
Sbjct: 765  VIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDE 824

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F
Sbjct: 825  AHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF 884

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             D++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N+
Sbjct: 885  ADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 944

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLT 1074
            + L + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL 
Sbjct: 945  EALNSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLM 1003

Query: 1075 LLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITR 1134
            LL  MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI R
Sbjct: 1004 LLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDR 1061

Query: 1135 FNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            FN   + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++
Sbjct: 1062 FNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMI 1121

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSP 1246
            YR V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D  
Sbjct: 1122 YRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD-- 1179

Query: 1247 GINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWD 1296
                 D+    +  +  V  +      +GG L    +          +K  E S+ I +D
Sbjct: 1180 -----DVEGMMSQGQRPVTPIPDVQPSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYD 1234

Query: 1297 ENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDAS 1354
            + AI++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +       
Sbjct: 1235 DAAISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII------ 1285

Query: 1355 AENSERKEENAVTGIEENEWDRLLR 1379
                 ++EEN    ++ + W++LLR
Sbjct: 1286 -----KQEEN----VDPDYWEKLLR 1301



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 395 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 437



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 309 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 368

Query: 125 QLKP 128
           Q +P
Sbjct: 369 QWEP 372


>gi|344282967|ref|XP_003413244.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Loxodonta
            africana]
          Length = 2101

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 353/868 (40%), Positives = 488/868 (56%), Gaps = 120/868 (13%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP+V     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 518  EPSVPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 576

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    RV++    K G     +
Sbjct: 577  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRVLNHSFDKKGDVHYLI 636

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIV 742
            KW  LPYD+CTWE +D+  +  Y +L   +       L +DA    LP+      +    
Sbjct: 637  KWKDLPYDQCTWE-IDDIDIPYYDNLKHAYWGHRELMLGEDA---RLPKRLIKKSKKLKD 692

Query: 743  ALTEQPEELK------------------GGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
               E+P E                    GG L P+QLE LNWLR  W +  + ILADEMG
Sbjct: 693  DKQEKPPETPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG 752

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKTV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R+
Sbjct: 753  LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 812

Query: 845  IIRQYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            +IR+ E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE
Sbjct: 813  VIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDE 872

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F
Sbjct: 873  AHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF 932

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             D++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N+
Sbjct: 933  ADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 992

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLT 1074
            + L + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL 
Sbjct: 993  EALNSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLM 1051

Query: 1075 LLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITR 1134
            LL  MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI R
Sbjct: 1052 LLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDR 1109

Query: 1135 FNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            FN   + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++
Sbjct: 1110 FNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMI 1169

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSP 1246
            YR V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D  
Sbjct: 1170 YRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD-- 1227

Query: 1247 GINGKDMGENNTSIEEAVRDLEQKHRKRGGGL-------------GDVYQDKCTEGSTKI 1293
                 D+    +  +  +  +      +GG L             GD   +K  E S+ I
Sbjct: 1228 -----DVEGMMSQGQRPITPIPDVQSSKGGTLPASVKKKHGSTPPGD---NKDVEDSSVI 1279

Query: 1294 VWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVD 1351
             +D+ AI++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +    
Sbjct: 1280 HYDDAAISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII--- 1333

Query: 1352 DASAENSERKEENAVTGIEENEWDRLLR 1379
                    ++EEN    ++ + W++LLR
Sbjct: 1334 --------KQEEN----VDPDYWEKLLR 1349



 Score = 81.3 bits (199), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 443 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 485



 Score = 75.1 bits (183), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 357 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 416

Query: 125 QLKP 128
           Q +P
Sbjct: 417 QWEP 420


>gi|326671885|ref|XP_003199545.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Danio rerio]
          Length = 1985

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 347/843 (41%), Positives = 484/843 (57%), Gaps = 107/843 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVINICDE--R 660
            +  VKW G S  H SW+ E QL++       NY+ K          YG+    + +E  R
Sbjct: 517  QLFVKWAGLSYWHCSWVSELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNNEKRR 576

Query: 661  WKQPQ---------------------RVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
             K PQ                     R+++    KDG  +  +KW  LPYD+C+WE  D+
Sbjct: 577  SKDPQYAAMEERFYRYGIKPEWLIIHRILNHSFDKDGDVQYLIKWRDLPYDQCSWEA-DD 635

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE-------------IVALTE 746
              +  Y  L   +     Q L ++       +GK   ++ +              +   +
Sbjct: 636  FDVPDYDSLKQAYWDHRNQVLGENHQPLLFRKGKRPKEEMKRREPPPDTPVVDPTIKFEQ 695

Query: 747  QPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +
Sbjct: 696  QPWYIDDTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHS 755

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN---- 860
            K P LV  PLST+ NW  EF +WAP+  VV Y G  ++RAIIR+ E+   D    +    
Sbjct: 756  KGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRAIIRENEFTFEDSAVKSGRKV 815

Query: 861  ---KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSF 917
               KK +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +  
Sbjct: 816  FRMKKDTPIKFHVLLTSYELITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKI 875

Query: 918  QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHM 977
             +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ PHM
Sbjct: 876  YYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHM 935

Query: 978  LRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVM 1037
            LRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M
Sbjct: 936  LRRLKADVFKNMPAKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGG-NQVSLLNIMM 994

Query: 1038 QLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFS 1094
             L+K CNHPYL P      P   +  +   + +K+S KLTLL  ML  L   GHRVLIFS
Sbjct: 995  DLKKCCNHPYLFPVAAVEAPVLPNGSYDGNLLVKSSGKLTLLQKMLIKLKDGGHRVLIFS 1054

Query: 1095 QMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGL 1153
            QMTK+LD+LED+L  EF    YER+DG ++ G RQ AI RFN   + +F FLLSTR+ GL
Sbjct: 1055 QMTKMLDLLEDFL--EFEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1112

Query: 1154 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKK 1213
            GINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AK+K
Sbjct: 1113 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRK 1172

Query: 1214 LMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRD 1266
            +ML  L V     +K+G  S++E++DIL++GTEELF D      + MGE        ++ 
Sbjct: 1173 MMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDDVEA-ARTMGE--------LKV 1223

Query: 1267 LEQKH--------RKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAE 1318
            LE K               L     +K  E  + I +D+NAI++LLDRS   +  T++  
Sbjct: 1224 LEMKSIVLPLCVPIAEVLNLSSTGDNKEGEEVSVIHYDDNAISKLLDRSQDATEDTEIQN 1283

Query: 1319 GDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIEENEWDR 1376
                N+ L S K  ++   EE  E++ +  +            ++EEN    ++ + W++
Sbjct: 1284 ---MNEYLSSFKVAQYVVREEDGEEEVQREII-----------KQEEN----VDPDYWEK 1325

Query: 1377 LLR 1379
            LLR
Sbjct: 1326 LLR 1328



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 26/42 (61%), Positives = 33/42 (78%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+C
Sbjct: 426 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 467



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  Q
Sbjct: 344 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQ 401


>gi|124487025|ref|NP_001074845.1| chromodomain helicase DNA binding protein 5 isoform 1 [Mus musculus]
          Length = 1952

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 352/852 (41%), Positives = 484/852 (56%), Gaps = 121/852 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            EF VKW G S  H SW+ E QL++       NY+ K          YG+           
Sbjct: 512  EFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRK 571

Query: 652  ---TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                +    +ER         W    R+++    K G     +KW  LPYD+CTWE +DE
Sbjct: 572  NKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFDKKGDIHYLIKWKDLPYDQCTWE-IDE 630

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK------- 752
              +  Y +L   +       L +DA    LP+      +       E+P +         
Sbjct: 631  IDIPYYDNLKQAYWGHRELMLGEDA---RLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVK 687

Query: 753  -----------GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCE 801
                       GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E
Sbjct: 688  FDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKE 747

Query: 802  FKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN- 860
              +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D      
Sbjct: 748  GHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRGG 807

Query: 861  ------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNS 914
                  KK    KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS
Sbjct: 808  KKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 867

Query: 915  FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVA 974
            +   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ 
Sbjct: 868  YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLG 927

Query: 975  PHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLN 1034
            PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LN
Sbjct: 928  PHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLN 986

Query: 1035 IVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVL 1091
            I+M L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L  EGHRVL
Sbjct: 987  IMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVL 1046

Query: 1092 IFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRS 1150
            IFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+
Sbjct: 1047 IFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRA 1104

Query: 1151 CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLA 1210
             GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+A
Sbjct: 1105 GGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVA 1164

Query: 1211 KKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGING-KDMGENNTSIEE 1262
            K+K+ML  L V     +KSGS  ++E++DIL++GTEELF D   + G    G+  T+   
Sbjct: 1165 KRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD--VEGMMSQGQRPTT--- 1219

Query: 1263 AVRDLEQKHRKRGGGL-------------GDVYQDKCTEGSTKIVWDENAIARLLDRSNL 1309
             + D++     +GG L             GD   +K  E S+ I +D+ AI++LLDR+  
Sbjct: 1220 PIPDIQS---TKGGSLTAGAKKKHGSTPPGD---NKDVEDSSVIHYDDAAISKLLDRNQD 1273

Query: 1310 QSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVT 1367
             +  T+L      N+ L S K  ++   EE   ++ E  V            ++EEN   
Sbjct: 1274 ATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREVI-----------KQEEN--- 1316

Query: 1368 GIEENEWDRLLR 1379
             ++ + W++LLR
Sbjct: 1317 -VDPDYWEKLLR 1327



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 421 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 463



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 335 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 394

Query: 125 QLKP 128
           Q +P
Sbjct: 395 QWEP 398


>gi|348571006|ref|XP_003471287.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Cavia
            porcellus]
          Length = 2442

 Score =  569 bits (1466), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 350/865 (40%), Positives = 485/865 (56%), Gaps = 114/865 (13%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP +     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 885  EPGLPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 943

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 944  PFDYGSGDEEGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFDKKGDVHYLI 1003

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIV 742
            KW  LPYD+CTWE +D+  +  Y  L   +       L +DA    LP+      +    
Sbjct: 1004 KWKDLPYDQCTWE-IDDIDIPYYDSLKQAYWGHRELMLGEDA---RLPKRLIKKGKKLKD 1059

Query: 743  ALTEQPEELK------------------GGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
               E+P +                    GG L P+QLE LNWLR  W +  + ILADEMG
Sbjct: 1060 DKQEKPPDTPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG 1119

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKTV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R+
Sbjct: 1120 LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 1179

Query: 845  IIRQYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            +IR+ E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE
Sbjct: 1180 VIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDE 1239

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F
Sbjct: 1240 AHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF 1299

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             D++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N+
Sbjct: 1300 ADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 1359

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLT 1074
            + L + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL 
Sbjct: 1360 EALNSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLM 1418

Query: 1075 LLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITR 1134
            LL  MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI R
Sbjct: 1419 LLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDR 1476

Query: 1135 FNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            FN   + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++
Sbjct: 1477 FNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMI 1536

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSP 1246
            YR V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D  
Sbjct: 1537 YRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD-- 1594

Query: 1247 GINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWD 1296
                 D+    +  +  V  +      +GG L    +          +K  E S+ I +D
Sbjct: 1595 -----DVEGMMSQGQRPVTPVPDMQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYD 1649

Query: 1297 ENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDAS 1354
            + AI++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  V       
Sbjct: 1650 DAAISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREVI------ 1700

Query: 1355 AENSERKEENAVTGIEENEWDRLLR 1379
                 ++EEN    ++ + W++LLR
Sbjct: 1701 -----KQEEN----VDPDYWEKLLR 1716



 Score = 81.3 bits (199), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 810 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 852



 Score = 75.1 bits (183), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 724 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 783

Query: 125 QLKP 128
           Q +P
Sbjct: 784 QWEP 787


>gi|426240369|ref|XP_004014081.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Ovis aries]
          Length = 2056

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 348/848 (41%), Positives = 480/848 (56%), Gaps = 113/848 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            EF VKW G S  H SW+ E QL++       NY+ K          YG+           
Sbjct: 494  EFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRK 553

Query: 652  ---TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                +    +ER         W    R+++    K G     +KW  LPYD+CTWE +DE
Sbjct: 554  NKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWE-IDE 612

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK------- 752
              +  Y  L   +       L +DA    LP+      +       E+P +         
Sbjct: 613  IDIPYYDSLKQAYWGHRELMLGEDA---RLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVK 669

Query: 753  -----------GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCE 801
                       GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E
Sbjct: 670  FDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKE 729

Query: 802  FKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN- 860
              +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D    + 
Sbjct: 730  GHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 789

Query: 861  ------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNS 914
                  KK    KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS
Sbjct: 790  KKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 849

Query: 915  FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVA 974
            +   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ 
Sbjct: 850  YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLG 909

Query: 975  PHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLN 1034
            PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LN
Sbjct: 910  PHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLN 968

Query: 1035 IVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVL 1091
            I+M L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L  EGHRVL
Sbjct: 969  IMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVL 1028

Query: 1092 IFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRS 1150
            IFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+
Sbjct: 1029 IFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRA 1086

Query: 1151 CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLA 1210
             GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+A
Sbjct: 1087 GGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVA 1146

Query: 1211 KKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEA 1263
            K+K+ML  L V     +KSGS  ++E++DIL++GTEELF D   + G  M          
Sbjct: 1147 KRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD--VEG--MMSQGQRPATP 1202

Query: 1264 VRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDENAIARLLDRSNLQSGS 1313
            + D++     +GG L    +          +K  E S+ I +D+ AI++LLDR+   +  
Sbjct: 1203 IPDVQS---SKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDD 1259

Query: 1314 TDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIEE 1371
            T+L      N+ L S K  ++   EE   ++ E  +            ++EEN    ++ 
Sbjct: 1260 TELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII-----------KQEEN----VDP 1301

Query: 1372 NEWDRLLR 1379
            + W++LLR
Sbjct: 1302 DYWEKLLR 1309



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 403 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 445



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 317 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 376

Query: 125 QLKP 128
           Q +P
Sbjct: 377 QWEP 380


>gi|395841073|ref|XP_003793373.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Otolemur
            garnettii]
          Length = 2088

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 355/865 (41%), Positives = 492/865 (56%), Gaps = 114/865 (13%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP +     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 632  EPGIPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 690

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 691  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLI 750

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKG----DCQQ 738
            KW  LPYD+CTWE +D+  +  Y +L   +       L +DA   +    KG    D +Q
Sbjct: 751  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLIKKGKKLRDDKQ 809

Query: 739  SE---------IVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
             +          V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGK
Sbjct: 810  EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGK 869

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR
Sbjct: 870  TVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 929

Query: 848  QYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            + E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE HR
Sbjct: 930  ENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHR 989

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+
Sbjct: 990  LKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADI 1049

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
            +   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L
Sbjct: 1050 SKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL 1109

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLH 1077
             + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL LL 
Sbjct: 1110 NSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQ 1168

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN 
Sbjct: 1169 KMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNA 1226

Query: 1138 DKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
              + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR 
Sbjct: 1227 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1286

Query: 1197 VVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGIN 1249
            V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D   + 
Sbjct: 1287 VTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD--VE 1344

Query: 1250 GKDMGENNTSIEEAVRDLEQKHRKRGGGL-------------GDVYQDKCTEGSTKIVWD 1296
            G  M          + D++     +GG L             GD   +K  E S+ I +D
Sbjct: 1345 G--MMSQGQRPATPIPDVQS---SKGGALAASAKKKHGSTPPGD---NKDVEDSSVIHYD 1396

Query: 1297 ENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDAS 1354
            + AI++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +       
Sbjct: 1397 DAAISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII------ 1447

Query: 1355 AENSERKEENAVTGIEENEWDRLLR 1379
                 ++EEN    ++ + W++LLR
Sbjct: 1448 -----KQEEN----VDPDYWEKLLR 1463



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 557 CRVCKDGGELLCCDACPSSYHLHCLNPPLAEIPNGEWLCPRCT 599



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 471 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 530

Query: 125 QLKP 128
           Q +P
Sbjct: 531 QWEP 534


>gi|218197711|gb|EEC80138.1| hypothetical protein OsI_21929 [Oryza sativa Indica Group]
 gi|222635083|gb|EEE65215.1| hypothetical protein OsJ_20361 [Oryza sativa Japonica Group]
          Length = 1309

 Score =  568 bits (1463), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 303/673 (45%), Positives = 437/673 (64%), Gaps = 58/673 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK------RKLENYKAKYGTTV-----INICDERWK 662
            +L+KW G S++H +W+ ES+    AK       +L N+  +  +T       +     W 
Sbjct: 92   YLIKWKGISHLHCTWVSESEYLETAKIYPRLKTRLNNFHKQMDSTDKSDDDYSAIRPEWT 151

Query: 663  QPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK-----LDEPALEKYSHLTDLFVQFER 717
               R+++ R S  G RE +VKW  L YDECTWE      + +P +E+++         E 
Sbjct: 152  TVDRILATRKSSTGEREYYVKWKELTYDECTWENDSDIAVFQPQIERFN---------EI 202

Query: 718  QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNV 777
            Q+ +K +++      K      EI    E P+ L GG L P+QLE LN+LR  W+ +K V
Sbjct: 203  QSRRKKSTD------KCKSVTREIRQYKESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRV 256

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKL-PCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
            IL DEMGLGKT+ + AF+ SL+ +   KL P LV+ PLST+ NW  EFA WAP +NVV Y
Sbjct: 257  ILGDEMGLGKTIQSIAFLGSLFVD---KLGPHLVVAPLSTLRNWEREFATWAPQMNVVMY 313

Query: 837  HGCAKARAIIRQYEWH------------ASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
             G A +R IIR+YE++             S P N +KK S  KF+VLLT+YEMI  DS+ 
Sbjct: 314  FGSAASREIIRKYEFYYPKEKPKKLKKKKSSPSNEDKKQSRIKFDVLLTSYEMINMDSTV 373

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L+ + WE ++VDEGHRLKN  SKLF  L  +  +HRVLLTGTP+QNN+ E++ L++FL+ 
Sbjct: 374  LKTIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEG 433

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
             SF S++  +E+F D+   ++VE+L  ++ PH+LRR KKD M+ +PPK E ++ VEL+S 
Sbjct: 434  DSFGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSK 493

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHE 1064
            Q EYY+A+LTKNY++L     G    S++N+VM+LRK+C H ++    E  + S E L  
Sbjct: 494  QKEYYKAILTKNYEVLTRRSGG--HVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRR 551

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            + +++S K+ LL  M+  L ++GHRVLI+SQ   +LD+LEDYL+  +   +YER+DG + 
Sbjct: 552  L-LESSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLS--YRKWSYERIDGKIG 608

Query: 1125 VGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
              +RQ  I RFN ++ +RF FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM RAH
Sbjct: 609  GAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAH 668

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK--SGS---QKEVEDILRWGT 1238
            R+GQ+ ++++YRLV R ++EER++QL KKK++L+ L V +   G+   Q+E++DI+R G+
Sbjct: 669  RLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTKGTNIVQEELDDIIRHGS 728

Query: 1239 EELFNDSPGINGK 1251
            +ELF+D     GK
Sbjct: 729  KELFDDENDEAGK 741


>gi|358416078|ref|XP_609360.5| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Bos taurus]
          Length = 1991

 Score =  568 bits (1463), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 348/848 (41%), Positives = 480/848 (56%), Gaps = 113/848 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            EF VKW G S  H SW+ E QL++       NY+ K          YG+           
Sbjct: 547  EFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRK 606

Query: 652  ---TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                +    +ER         W    R+++    K G     +KW  LPYD+CTWE +DE
Sbjct: 607  NKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWE-IDE 665

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK------- 752
              +  Y  L   +       L +DA    LP+      +       E+P +         
Sbjct: 666  IDIPYYDSLKQAYWGHRELMLGEDA---RLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVK 722

Query: 753  -----------GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCE 801
                       GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E
Sbjct: 723  FDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKE 782

Query: 802  FKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN- 860
              +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D    + 
Sbjct: 783  GHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 842

Query: 861  ------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNS 914
                  KK    KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS
Sbjct: 843  KKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 902

Query: 915  FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVA 974
            +   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ 
Sbjct: 903  YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLG 962

Query: 975  PHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLN 1034
            PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LN
Sbjct: 963  PHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLN 1021

Query: 1035 IVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVL 1091
            I+M L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L  EGHRVL
Sbjct: 1022 IMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVL 1081

Query: 1092 IFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRS 1150
            IFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+
Sbjct: 1082 IFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRA 1139

Query: 1151 CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLA 1210
             GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+A
Sbjct: 1140 GGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVA 1199

Query: 1211 KKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEA 1263
            K+K+ML  L V     +KSGS  ++E++DIL++GTEELF D   + G  M          
Sbjct: 1200 KRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD--VEG--MMSQGQRPATP 1255

Query: 1264 VRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDENAIARLLDRSNLQSGS 1313
            + D++     +GG L    +          +K  E S+ I +D+ AI++LLDR+   +  
Sbjct: 1256 IPDVQS---SKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDD 1312

Query: 1314 TDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIEE 1371
            T+L      N+ L S K  ++   EE   ++ E  +            ++EEN    ++ 
Sbjct: 1313 TELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII-----------KQEEN----VDP 1354

Query: 1372 NEWDRLLR 1379
            + W++LLR
Sbjct: 1355 DYWEKLLR 1362



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 456 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 498



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 370 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 429

Query: 125 QLKP 128
           Q +P
Sbjct: 430 QWEP 433


>gi|350585547|ref|XP_003481984.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Sus
            scrofa]
          Length = 1865

 Score =  568 bits (1463), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 354/862 (41%), Positives = 490/862 (56%), Gaps = 108/862 (12%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP V     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 487  EPGVPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 545

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 546  PFDYGSGDEDSKSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFDKKGDVHYLI 605

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKG----DCQQ 738
            KW  LPYD+CTWE +D+  +  Y  L   +       L +DA   +    KG    D +Q
Sbjct: 606  KWKDLPYDQCTWE-IDDIDIPYYDSLKQAYWGHRELMLGEDARLPKRLVKKGKKLRDDKQ 664

Query: 739  SE---------IVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
             +          V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGK
Sbjct: 665  EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGK 724

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR
Sbjct: 725  TVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 784

Query: 848  QYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            + E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE HR
Sbjct: 785  ENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHR 844

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+
Sbjct: 845  LKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADI 904

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
            +   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L
Sbjct: 905  SKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL 964

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLH 1077
             + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL LL 
Sbjct: 965  NSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQ 1023

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN 
Sbjct: 1024 KMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNA 1081

Query: 1138 DKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
              + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR 
Sbjct: 1082 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1141

Query: 1197 VVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGIN 1249
            V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D   + 
Sbjct: 1142 VTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD--VE 1199

Query: 1250 GKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDENA 1299
            G  M          + D++     +GG L    +          +K  E S+ I +D+ A
Sbjct: 1200 G--MMSQGQRPATPIPDVQS---SKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDAA 1254

Query: 1300 IARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAEN 1357
            I++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +          
Sbjct: 1255 ISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII--------- 1302

Query: 1358 SERKEENAVTGIEENEWDRLLR 1379
              ++EEN    ++ + W++LLR
Sbjct: 1303 --KQEEN----VDPDYWEKLLR 1318



 Score = 80.9 bits (198), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 412 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 454



 Score = 74.7 bits (182), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 326 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 385

Query: 125 QLKP 128
           Q +P
Sbjct: 386 QWEP 389


>gi|359074223|ref|XP_002694217.2| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Bos taurus]
          Length = 2042

 Score =  567 bits (1462), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 348/848 (41%), Positives = 480/848 (56%), Gaps = 113/848 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            EF VKW G S  H SW+ E QL++       NY+ K          YG+           
Sbjct: 598  EFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRK 657

Query: 652  ---TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                +    +ER         W    R+++    K G     +KW  LPYD+CTWE +DE
Sbjct: 658  NKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWE-IDE 716

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK------- 752
              +  Y  L   +       L +DA    LP+      +       E+P +         
Sbjct: 717  IDIPYYDSLKQAYWGHRELMLGEDA---RLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVK 773

Query: 753  -----------GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCE 801
                       GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E
Sbjct: 774  FDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKE 833

Query: 802  FKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN- 860
              +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D    + 
Sbjct: 834  GHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 893

Query: 861  ------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNS 914
                  KK    KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS
Sbjct: 894  KKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 953

Query: 915  FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVA 974
            +   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ 
Sbjct: 954  YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLG 1013

Query: 975  PHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLN 1034
            PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LN
Sbjct: 1014 PHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLN 1072

Query: 1035 IVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVL 1091
            I+M L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L  EGHRVL
Sbjct: 1073 IMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVL 1132

Query: 1092 IFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRS 1150
            IFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+
Sbjct: 1133 IFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRA 1190

Query: 1151 CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLA 1210
             GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+A
Sbjct: 1191 GGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVA 1250

Query: 1211 KKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEA 1263
            K+K+ML  L V     +KSGS  ++E++DIL++GTEELF D   + G  M          
Sbjct: 1251 KRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD--VEG--MMSQGQRPATP 1306

Query: 1264 VRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDENAIARLLDRSNLQSGS 1313
            + D++     +GG L    +          +K  E S+ I +D+ AI++LLDR+   +  
Sbjct: 1307 IPDVQS---SKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDD 1363

Query: 1314 TDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIEE 1371
            T+L      N+ L S K  ++   EE   ++ E  +            ++EEN    ++ 
Sbjct: 1364 TELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII-----------KQEEN----VDP 1405

Query: 1372 NEWDRLLR 1379
            + W++LLR
Sbjct: 1406 DYWEKLLR 1413



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 507 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 549



 Score = 75.1 bits (183), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 421 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 480

Query: 125 QLKP 128
           Q +P
Sbjct: 481 QWEP 484


>gi|326932279|ref|XP_003212247.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like, partial
            [Meleagris gallopavo]
          Length = 1949

 Score =  567 bits (1461), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 348/848 (41%), Positives = 483/848 (56%), Gaps = 108/848 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVINICDER-- 660
            EF VKW G S  H SW+ E QL++       NY+ K          YG+   +   E+  
Sbjct: 485  EFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRK 544

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+++    K G     +KW  LPYD+CTWE +DE
Sbjct: 545  NKDPHYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDIHYLIKWKDLPYDQCTWE-IDE 603

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE-------------IVALTE 746
              +  Y +L  L+       L +D    +    KG   + E              V   +
Sbjct: 604  IDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDK 663

Query: 747  QPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +
Sbjct: 664  QPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHS 723

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN---- 860
            K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D    +    
Sbjct: 724  KGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKV 783

Query: 861  ---KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSF 917
               KK +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS+  
Sbjct: 784  FRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI 843

Query: 918  QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHM 977
             +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ PHM
Sbjct: 844  DYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHM 903

Query: 978  LRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVM 1037
            LRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M
Sbjct: 904  LRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLNIMM 962

Query: 1038 QLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFS 1094
             L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L   GHRVLIFS
Sbjct: 963  DLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFS 1022

Query: 1095 QMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGL 1153
            QMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+ GL
Sbjct: 1023 QMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1080

Query: 1154 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKK 1213
            GINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AK+K
Sbjct: 1081 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRK 1140

Query: 1214 LMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRD 1266
            +ML  L V     +KSGS  ++E++DIL++GTEELF D   + G        ++ +AV  
Sbjct: 1141 MMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD--VEGMVSQGQRLTMPDAVTP 1198

Query: 1267 LEQKHRKRGGGL-------------GDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGS 1313
                   +GG +             GD   +K  + S+ I +D+ AI++LLDR+   +  
Sbjct: 1199 FSDTPSTKGGAVTPGMKKKHGGTPPGD---NKDVDDSSVIHYDDAAISKLLDRNQDATDD 1255

Query: 1314 TDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIEE 1371
            T+L      N+ L S K  ++   EE   ++ E  +            ++EEN    ++ 
Sbjct: 1256 TELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII-----------KQEEN----VDP 1297

Query: 1372 NEWDRLLR 1379
            + W++LLR
Sbjct: 1298 DYWEKLLR 1305



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 394 CRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCT 436



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 4/61 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLK 127
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  Q +
Sbjct: 312 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWE 371

Query: 128 P 128
           P
Sbjct: 372 P 372


>gi|296479122|tpg|DAA21237.1| TPA: chromodomain helicase DNA binding protein 5 [Bos taurus]
          Length = 2099

 Score =  567 bits (1461), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 348/848 (41%), Positives = 480/848 (56%), Gaps = 113/848 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            EF VKW G S  H SW+ E QL++       NY+ K          YG+           
Sbjct: 598  EFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRK 657

Query: 652  ---TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                +    +ER         W    R+++    K G     +KW  LPYD+CTWE +DE
Sbjct: 658  NKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWE-IDE 716

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK------- 752
              +  Y  L   +       L +DA    LP+      +       E+P +         
Sbjct: 717  IDIPYYDSLKQAYWGHRELMLGEDA---RLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVK 773

Query: 753  -----------GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCE 801
                       GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E
Sbjct: 774  FDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKE 833

Query: 802  FKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN- 860
              +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D    + 
Sbjct: 834  GHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 893

Query: 861  ------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNS 914
                  KK    KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS
Sbjct: 894  KKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 953

Query: 915  FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVA 974
            +   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ 
Sbjct: 954  YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLG 1013

Query: 975  PHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLN 1034
            PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LN
Sbjct: 1014 PHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLN 1072

Query: 1035 IVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVL 1091
            I+M L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L  EGHRVL
Sbjct: 1073 IMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVL 1132

Query: 1092 IFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRS 1150
            IFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+
Sbjct: 1133 IFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRA 1190

Query: 1151 CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLA 1210
             GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+A
Sbjct: 1191 GGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVA 1250

Query: 1211 KKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEA 1263
            K+K+ML  L V     +KSGS  ++E++DIL++GTEELF D   + G  M          
Sbjct: 1251 KRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD--VEG--MMSQGQRPATP 1306

Query: 1264 VRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDENAIARLLDRSNLQSGS 1313
            + D++     +GG L    +          +K  E S+ I +D+ AI++LLDR+   +  
Sbjct: 1307 IPDVQS---SKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDD 1363

Query: 1314 TDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIEE 1371
            T+L      N+ L S K  ++   EE   ++ E  +            ++EEN    ++ 
Sbjct: 1364 TELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII-----------KQEEN----VDP 1405

Query: 1372 NEWDRLLR 1379
            + W++LLR
Sbjct: 1406 DYWEKLLR 1413



 Score = 81.3 bits (199), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 507 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 549



 Score = 75.1 bits (183), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 421 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 480

Query: 125 QLKP 128
           Q +P
Sbjct: 481 QWEP 484


>gi|410966154|ref|XP_003989600.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Felis catus]
          Length = 2003

 Score =  567 bits (1461), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 354/864 (40%), Positives = 490/864 (56%), Gaps = 113/864 (13%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP V     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 521  EPGVPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 579

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 580  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLI 639

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPR--------GKG 734
            KW  LPYD+CTWE +D+  +  Y +L   +       L +DA    LP+         K 
Sbjct: 640  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDA---RLPKRLVKKGKKPKE 695

Query: 735  DCQQSE-------IVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGL 785
            D Q+          V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGL
Sbjct: 696  DKQKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGL 755

Query: 786  GKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAI 845
            GKTV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++
Sbjct: 756  GKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSV 815

Query: 846  IRQYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
            IR+ E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE 
Sbjct: 816  IRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEA 875

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F 
Sbjct: 876  HRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA 935

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            D++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++
Sbjct: 936  DISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFE 995

Query: 1019 ILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTL 1075
             L + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL L
Sbjct: 996  ALNSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLML 1054

Query: 1076 LHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRF 1135
            L  MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RF
Sbjct: 1055 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRF 1112

Query: 1136 NQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVY 1194
            N   + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++Y
Sbjct: 1113 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1172

Query: 1195 RLVVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPG 1247
            R V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D   
Sbjct: 1173 RFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD--- 1229

Query: 1248 INGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDE 1297
                D+    +  +  V  +      +GG L    +          +K  E S+ I +D+
Sbjct: 1230 ----DVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDD 1285

Query: 1298 NAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASA 1355
             AI++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +        
Sbjct: 1286 AAISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII------- 1335

Query: 1356 ENSERKEENAVTGIEENEWDRLLR 1379
                ++EEN    ++ + W++LLR
Sbjct: 1336 ----KQEEN----VDPDYWEKLLR 1351



 Score = 81.3 bits (199), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 446 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 488



 Score = 75.1 bits (183), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 360 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 419

Query: 125 QLKP 128
           Q +P
Sbjct: 420 QWEP 423


>gi|354501163|ref|XP_003512662.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like
            [Cricetulus griseus]
          Length = 1977

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 350/865 (40%), Positives = 486/865 (56%), Gaps = 114/865 (13%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP +     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 480  EPGMPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 538

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 539  PFDYGSGDEDSKSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFDKKGDVHYLI 598

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIV 742
            KW  LPYD+CTWE +D+  +  Y +L   +       L +DA    +P+      +    
Sbjct: 599  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDA---RVPKRLVKKGKKLKD 654

Query: 743  ALTEQPEELK------------------GGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
               E+P +                    GG L P+QLE LNWLR  W +  + ILADEMG
Sbjct: 655  DKQEKPPDTPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG 714

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKTV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R+
Sbjct: 715  LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 774

Query: 845  IIRQYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            +IR+ E+   D            KK    KF+VLLT+YE+I  D + L  + W  LVVDE
Sbjct: 775  VIRENEFSFEDNAIRGGKKVFRMKKEVQVKFHVLLTSYELITIDQAILGSIEWACLVVDE 834

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F
Sbjct: 835  AHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF 894

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             D++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N+
Sbjct: 895  ADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 954

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLT 1074
            + L + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL 
Sbjct: 955  EALNSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLM 1013

Query: 1075 LLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITR 1134
            LL  MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI R
Sbjct: 1014 LLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDR 1071

Query: 1135 FNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            FN   + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++
Sbjct: 1072 FNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMI 1131

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSP 1246
            YR V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D  
Sbjct: 1132 YRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD- 1190

Query: 1247 GINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWD 1296
             + G  M          + D++     +GG L    +          +K  E S+ I +D
Sbjct: 1191 -VEG--MMSQGQRPATPIPDVQS---SKGGSLAASVKKKHGSTPPGDNKDVEDSSVIHYD 1244

Query: 1297 ENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDAS 1354
            + AI++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  V       
Sbjct: 1245 DAAISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREVI------ 1295

Query: 1355 AENSERKEENAVTGIEENEWDRLLR 1379
                 ++EEN    ++ + W++LLR
Sbjct: 1296 -----KQEEN----VDPDYWEKLLR 1311



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 405 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 447



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 319 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 378

Query: 125 QLKP 128
           Q +P
Sbjct: 379 QWEP 382


>gi|380787663|gb|AFE65707.1| chromodomain-helicase-DNA-binding protein 5 [Macaca mulatta]
          Length = 1954

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 348/862 (40%), Positives = 487/862 (56%), Gaps = 108/862 (12%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP++     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 494  EPSLPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 552

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 553  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLI 612

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA-------------SEDEL 729
            KW  LPYD+CTWE +D+  +  Y +L   +       L +D               +D+ 
Sbjct: 613  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQ 671

Query: 730  PRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
             +          V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGK
Sbjct: 672  EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGK 731

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR
Sbjct: 732  TVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 791

Query: 848  QYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            + E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE HR
Sbjct: 792  ENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHR 851

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+
Sbjct: 852  LKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADI 911

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
            +   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L
Sbjct: 912  SKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL 971

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLH 1077
             + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL LL 
Sbjct: 972  NSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQ 1030

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN 
Sbjct: 1031 KMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNA 1088

Query: 1138 DKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
              + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR 
Sbjct: 1089 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1148

Query: 1197 VVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGIN 1249
            V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D     
Sbjct: 1149 VTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD----- 1203

Query: 1250 GKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDENA 1299
              D+    +  +  V  +      +GG L    +          +K  E S+ I +D+ A
Sbjct: 1204 --DVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGDNKDVEDSSVIHYDDAA 1261

Query: 1300 IARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAEN 1357
            I++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +          
Sbjct: 1262 ISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII--------- 1309

Query: 1358 SERKEENAVTGIEENEWDRLLR 1379
              ++EEN    ++ + W++LLR
Sbjct: 1310 --KQEEN----VDPDYWEKLLR 1325



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 419 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 461



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 333 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 392

Query: 125 QLKP 128
           Q +P
Sbjct: 393 QWEP 396


>gi|402852748|ref|XP_003891075.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 isoform 2
            [Papio anubis]
          Length = 1951

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 348/862 (40%), Positives = 487/862 (56%), Gaps = 108/862 (12%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP++     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 494  EPSLPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 552

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 553  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLI 612

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA-------------SEDEL 729
            KW  LPYD+CTWE +D+  +  Y +L   +       L +D               +D+ 
Sbjct: 613  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQ 671

Query: 730  PRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
             +          V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGK
Sbjct: 672  EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGK 731

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR
Sbjct: 732  TVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 791

Query: 848  QYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            + E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE HR
Sbjct: 792  ENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHR 851

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+
Sbjct: 852  LKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADI 911

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
            +   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L
Sbjct: 912  SKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL 971

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLH 1077
             + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL LL 
Sbjct: 972  NSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQ 1030

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN 
Sbjct: 1031 KMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNA 1088

Query: 1138 DKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
              + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR 
Sbjct: 1089 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1148

Query: 1197 VVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGIN 1249
            V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D     
Sbjct: 1149 VTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD----- 1203

Query: 1250 GKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDENA 1299
              D+    +  +  V  +      +GG L    +          +K  E S+ I +D+ A
Sbjct: 1204 --DVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGDNKDVEDSSVIHYDDAA 1261

Query: 1300 IARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAEN 1357
            I++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +          
Sbjct: 1262 ISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII--------- 1309

Query: 1358 SERKEENAVTGIEENEWDRLLR 1379
              ++EEN    ++ + W++LLR
Sbjct: 1310 --KQEEN----VDPDYWEKLLR 1325



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 419 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 461



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 333 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 392

Query: 125 QLKP 128
           Q +P
Sbjct: 393 QWEP 396


>gi|37542684|gb|AAL47211.1| chromatin-remodeling factor CHD3 [Oryza sativa]
          Length = 1360

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 303/673 (45%), Positives = 437/673 (64%), Gaps = 58/673 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK------RKLENYKAKYGTTV-----INICDERWK 662
            +L+KW G S++H +W+ ES+    AK       +L N+  +  +T       +     W 
Sbjct: 143  YLIKWKGISHLHCTWVSESEYLETAKIYPRLKTRLNNFHKQMDSTDKSDDDYSAIRPEWT 202

Query: 663  QPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK-----LDEPALEKYSHLTDLFVQFER 717
               R+++ R S  G RE +VKW  L YDECTWE      + +P +E+++         E 
Sbjct: 203  TVDRILATRKSSTGEREYYVKWKELTYDECTWENDSDIAVFQPQIERFN---------EI 253

Query: 718  QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNV 777
            Q+ +K +++      K      EI    E P+ L GG L P+QLE LN+LR  W+ +K V
Sbjct: 254  QSRRKKSTD------KCKSVTREIRQYKESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRV 307

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKL-PCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
            IL DEMGLGKT+ + AF+ SL+ +   KL P LV+ PLST+ NW  EFA WAP +NVV Y
Sbjct: 308  ILGDEMGLGKTIQSIAFLGSLFVD---KLGPHLVVAPLSTLRNWEREFATWAPQMNVVMY 364

Query: 837  HGCAKARAIIRQYEWH------------ASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
             G A +R IIR+YE++             S P N +KK S  KF+VLLT+YEMI  DS+ 
Sbjct: 365  FGSAASREIIRKYEFYYPKEKPKKLKKKKSSPSNEDKKQSRIKFDVLLTSYEMINMDSTV 424

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L+ + WE ++VDEGHRLKN  SKLF  L  +  +HRVLLTGTP+QNN+ E++ L++FL+ 
Sbjct: 425  LKTIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEG 484

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
             SF S++  +E+F D+   ++VE+L  ++ PH+LRR KKD M+ +PPK E ++ VEL+S 
Sbjct: 485  DSFGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSK 544

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHE 1064
            Q EYY+A+LTKNY++L     G    S++N+VM+LRK+C H ++    E  + S E L  
Sbjct: 545  QKEYYKAILTKNYEVLTRRSGG--HVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRR 602

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            + +++S K+ LL  M+  L ++GHRVLI+SQ   +LD+LEDYL+  +   +YER+DG + 
Sbjct: 603  L-LESSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLS--YRKWSYERIDGKIG 659

Query: 1125 VGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
              +RQ  I RFN ++ +RF FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM RAH
Sbjct: 660  GAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAH 719

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK--SGS---QKEVEDILRWGT 1238
            R+GQ+ ++++YRLV R ++EER++QL KKK++L+ L V +   G+   Q+E++DI+R G+
Sbjct: 720  RLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTKGTNIVQEELDDIIRHGS 779

Query: 1239 EELFNDSPGINGK 1251
            +ELF+D     GK
Sbjct: 780  KELFDDENDEAGK 792



 Score = 43.1 bits (100), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 7/58 (12%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSI 135
           C  C    NL+ C +C   +H +CL P L  I + KW CP+C      + P++ ++ I
Sbjct: 64  CQKCGENDNLVPCSTCTYAFHRKCLVPRLN-ITSDKWSCPEC------VSPLTEMEKI 114


>gi|449485189|ref|XP_004157094.1| PREDICTED: LOW QUALITY PROTEIN: CHD3-type chromatin-remodeling factor
            PICKLE-like [Cucumis sativus]
          Length = 1474

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 323/784 (41%), Positives = 468/784 (59%), Gaps = 88/784 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQ-LKVLA-----KRKLENYKAKYGTTVINICDE------- 659
            ++LVKW G S +H +W+PE   +K        K K+ N+  +   ++ N  +E       
Sbjct: 132  QYLVKWKGLSYLHCTWVPEKDFIKAFKTHPRLKTKVNNFHKQ--MSLNNNAEEDFVAIRP 189

Query: 660  RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             W    R+++ R + D  +E  VK+  L YDEC WE   E  +  +    D F + + ++
Sbjct: 190  EWTTVDRILACRGN-DEEKEYLVKYKELSYDECYWEF--ESDISAFQPEIDKFHKIQSKS 246

Query: 720  LKKDASEDELPRGK-GDCQ--QSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKN 776
             K+ +++++   G  G+ +  Q E       P+ L GG L P+QLE LN+LR  W K  +
Sbjct: 247  RKQFSNKNKSSHGDFGEVKKKQKEFQQYDSSPQFLSGGTLHPYQLEGLNFLRYSWSKQTH 306

Query: 777  VILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
            VILADEMGLGKT+ + AF++SLY E  A  P LV+ PLST+ NW  EFA WAP++NVV Y
Sbjct: 307  VILADEMGLGKTIQSIAFLASLYEENIA--PHLVVAPLSTLRNWEREFATWAPHMNVVMY 364

Query: 837  HGCAKARAIIRQYEWHASDPDNL-----------NKKTSSYKFNVLLTTYEMILADSSHL 885
             G A+AR +IR+YE++                    K    KF+VLLT+YEMI  D   L
Sbjct: 365  VGTAQARTVIREYEFYFPKNHKKVKKKKSGQIVSESKQDRIKFDVLLTSYEMINFDVGTL 424

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
            + + W+ L+VDEGHRLKN  SKLFS L  FS   RVLLTGTPLQNN+ E++ L++FL   
Sbjct: 425  KPIKWQSLIVDEGHRLKNKDSKLFSSLKQFSSSLRVLLTGTPLQNNLDELFMLMHFLDAG 484

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
             F SL  F+E+F D+   +++  L +++APH+LRR+KKD M+++PPK E ++ VELS  Q
Sbjct: 485  KFASLEEFQEEFRDINQEEQILRLHRMLAPHLLRRVKKDVMKDLPPKKELILRVELSGKQ 544

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEM 1065
             EYY+A+LT+NYQ+L    +G AQ S++N+VM+LRK+C H Y++ G EPD    E  ++ 
Sbjct: 545  KEYYKAILTRNYQLLTR--RGGAQISLINVVMELRKLCCHAYMLEGVEPDIEDPEEAYKQ 602

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             ++ S KL LL  M+  L ++GHRVLI++Q   +LD+LEDY +  +    YER+DG V  
Sbjct: 603  LLETSGKLHLLDKMMVRLKEQGHRVLIYTQFQHMLDLLEDYCS--YKKWQYERIDGKVCG 660

Query: 1126 GDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
             +RQ  I RFN ++ SRF F LSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM RAHR
Sbjct: 661  AERQIRIDRFNAKNSSRFCFXLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----SGSQKEVEDILRWGTEE 1240
            +GQ+ ++++YRLV R ++EER++Q+ KKK++L+ L V +    + +Q+E++DI+R+G++E
Sbjct: 721  LGQTNKVMIYRLVTRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYGSKE 780

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAI 1300
            LF D     GK                                      S +I +D+ AI
Sbjct: 781  LFADENDEAGK--------------------------------------SRQIHYDDAAI 802

Query: 1301 ARLLDRSNL--QSGSTDLAEGDLENDMLGSVKAT--EWNEETTEDQAESPVAAVDDASAE 1356
             RLLDR  +  +  + D  E D   + L + K    E+ +E   ++A    +      A 
Sbjct: 803  DRLLDRDQVRDEEATVDDEEDD---EFLKAFKVANFEYIDEVEAEEAAKRASMGSQPVAS 859

Query: 1357 NSER 1360
            N ER
Sbjct: 860  NVER 863



 Score = 55.1 bits (131), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 6/58 (10%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSI 135
           C  C    NLL C++C   YH +CL PPLK      W+CP+C      + P+S++D I
Sbjct: 54  CQTCGESENLLSCETCTYDYHPKCLIPPLKAPLPSNWRCPEC------VSPLSDIDKI 105


>gi|402852746|ref|XP_003891074.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 isoform 1
            [Papio anubis]
          Length = 1954

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 348/862 (40%), Positives = 487/862 (56%), Gaps = 108/862 (12%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP++     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 494  EPSLPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 552

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 553  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLI 612

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA-------------SEDEL 729
            KW  LPYD+CTWE +D+  +  Y +L   +       L +D               +D+ 
Sbjct: 613  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQ 671

Query: 730  PRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
             +          V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGK
Sbjct: 672  EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGK 731

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR
Sbjct: 732  TVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 791

Query: 848  QYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            + E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE HR
Sbjct: 792  ENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHR 851

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+
Sbjct: 852  LKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADI 911

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
            +   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L
Sbjct: 912  SKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL 971

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLH 1077
             + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL LL 
Sbjct: 972  NSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQ 1030

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN 
Sbjct: 1031 KMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNA 1088

Query: 1138 DKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
              + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR 
Sbjct: 1089 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1148

Query: 1197 VVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGIN 1249
            V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D     
Sbjct: 1149 VTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD----- 1203

Query: 1250 GKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDENA 1299
              D+    +  +  V  +      +GG L    +          +K  E S+ I +D+ A
Sbjct: 1204 --DVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGDNKDVEDSSVIHYDDAA 1261

Query: 1300 IARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAEN 1357
            I++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +          
Sbjct: 1262 ISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII--------- 1309

Query: 1358 SERKEENAVTGIEENEWDRLLR 1379
              ++EEN    ++ + W++LLR
Sbjct: 1310 --KQEEN----VDPDYWEKLLR 1325



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 419 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 461



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 333 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 392

Query: 125 QLKP 128
           Q +P
Sbjct: 393 QWEP 396


>gi|24308089|ref|NP_056372.1| chromodomain-helicase-DNA-binding protein 5 [Homo sapiens]
 gi|51701343|sp|Q8TDI0.1|CHD5_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 5;
            Short=CHD-5; AltName: Full=ATP-dependent helicase CHD5
 gi|19773960|gb|AAL98962.1|AF425231_1 chromodomain helicase DNA binding protein 5 [Homo sapiens]
 gi|119591922|gb|EAW71516.1| chromodomain helicase DNA binding protein 5 [Homo sapiens]
 gi|148922387|gb|AAI46382.1| Chromodomain helicase DNA binding protein 5 [synthetic construct]
 gi|151555557|gb|AAI48804.1| Chromodomain helicase DNA binding protein 5 [synthetic construct]
 gi|261857536|dbj|BAI45290.1| Chromodomain-helicase-DNA-binding protein 5 [synthetic construct]
          Length = 1954

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 348/862 (40%), Positives = 487/862 (56%), Gaps = 108/862 (12%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP++     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 494  EPSLPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 552

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 553  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLI 612

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA-------------SEDEL 729
            KW  LPYD+CTWE +D+  +  Y +L   +       L +D               +D+ 
Sbjct: 613  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQ 671

Query: 730  PRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
             +          V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGK
Sbjct: 672  EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGK 731

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR
Sbjct: 732  TVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 791

Query: 848  QYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            + E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE HR
Sbjct: 792  ENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHR 851

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+
Sbjct: 852  LKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADI 911

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
            +   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L
Sbjct: 912  SKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL 971

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLH 1077
             + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL LL 
Sbjct: 972  NSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQ 1030

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN 
Sbjct: 1031 KMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNA 1088

Query: 1138 DKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
              + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR 
Sbjct: 1089 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1148

Query: 1197 VVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGIN 1249
            V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D     
Sbjct: 1149 VTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD----- 1203

Query: 1250 GKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDENA 1299
              D+    +  +  V  +      +GG L    +          +K  E S+ I +D+ A
Sbjct: 1204 --DVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGDNKDVEDSSVIHYDDAA 1261

Query: 1300 IARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAEN 1357
            I++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +          
Sbjct: 1262 ISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII--------- 1309

Query: 1358 SERKEENAVTGIEENEWDRLLR 1379
              ++EEN    ++ + W++LLR
Sbjct: 1310 --KQEEN----VDPDYWEKLLR 1325



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 419 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 461



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 333 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 392

Query: 125 QLKP 128
           Q +P
Sbjct: 393 QWEP 396


>gi|55771379|dbj|BAD72546.1| chromatin-remodeling factor CHD3 [Oryza sativa Japonica Group]
 gi|55773904|dbj|BAD72509.1| chromatin-remodeling factor CHD3 [Oryza sativa Japonica Group]
          Length = 1354

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 303/673 (45%), Positives = 437/673 (64%), Gaps = 58/673 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK------RKLENYKAKYGTTV-----INICDERWK 662
            +L+KW G S++H +W+ ES+    AK       +L N+  +  +T       +     W 
Sbjct: 137  YLIKWKGISHLHCTWVSESEYLETAKIYPRLKTRLNNFHKQMDSTDKSDDDYSAIRPEWT 196

Query: 663  QPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK-----LDEPALEKYSHLTDLFVQFER 717
               R+++ R S  G RE +VKW  L YDECTWE      + +P +E+++         E 
Sbjct: 197  TVDRILATRKSSTGEREYYVKWKELTYDECTWENDSDIAVFQPQIERFN---------EI 247

Query: 718  QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNV 777
            Q+ +K +++      K      EI    E P+ L GG L P+QLE LN+LR  W+ +K V
Sbjct: 248  QSRRKKSTD------KCKSVTREIRQYKESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRV 301

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKL-PCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
            IL DEMGLGKT+ + AF+ SL+ +   KL P LV+ PLST+ NW  EFA WAP +NVV Y
Sbjct: 302  ILGDEMGLGKTIQSIAFLGSLFVD---KLGPHLVVAPLSTLRNWEREFATWAPQMNVVMY 358

Query: 837  HGCAKARAIIRQYEWH------------ASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
             G A +R IIR+YE++             S P N +KK S  KF+VLLT+YEMI  DS+ 
Sbjct: 359  FGSAASREIIRKYEFYYPKEKPKKLKKKKSSPSNEDKKQSRIKFDVLLTSYEMINMDSTV 418

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L+ + WE ++VDEGHRLKN  SKLF  L  +  +HRVLLTGTP+QNN+ E++ L++FL+ 
Sbjct: 419  LKTIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEG 478

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
             SF S++  +E+F D+   ++VE+L  ++ PH+LRR KKD M+ +PPK E ++ VEL+S 
Sbjct: 479  DSFGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSK 538

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHE 1064
            Q EYY+A+LTKNY++L     G    S++N+VM+LRK+C H ++    E  + S E L  
Sbjct: 539  QKEYYKAILTKNYEVLTRRSGG--HVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRR 596

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            + +++S K+ LL  M+  L ++GHRVLI+SQ   +LD+LEDYL+  +   +YER+DG + 
Sbjct: 597  L-LESSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLS--YRKWSYERIDGKIG 653

Query: 1125 VGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
              +RQ  I RFN ++ +RF FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM RAH
Sbjct: 654  GAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAH 713

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK--SGS---QKEVEDILRWGT 1238
            R+GQ+ ++++YRLV R ++EER++QL KKK++L+ L V +   G+   Q+E++DI+R G+
Sbjct: 714  RLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTKGTNIVQEELDDIIRHGS 773

Query: 1239 EELFNDSPGINGK 1251
            +ELF+D     GK
Sbjct: 774  KELFDDENDEAGK 786



 Score = 43.1 bits (100), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 7/58 (12%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSI 135
           C  C    NL+ C +C   +H +CL P L  I + KW CP+C      + P++ ++ I
Sbjct: 58  CQKCGENDNLVPCSTCTYAFHRKCLVPRLN-ITSDKWSCPEC------VSPLTEMEKI 108


>gi|37542688|gb|AAL47203.1| chromatin-remodeling factor CHD3 [Oryza sativa Indica Group]
          Length = 1111

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 303/673 (45%), Positives = 437/673 (64%), Gaps = 58/673 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK------RKLENYKAKYGTTV-----INICDERWK 662
            +L+KW G S++H +W+ ES+    AK       +L N+  +  +T       +     W 
Sbjct: 143  YLIKWKGISHLHCTWVSESEYLETAKIYPRLKTRLNNFHKQMDSTDKSDDDYSAIRPEWT 202

Query: 663  QPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK-----LDEPALEKYSHLTDLFVQFER 717
               R+++ R S  G RE +VKW  L YDECTWE      + +P +E+++         E 
Sbjct: 203  TVDRILATRKSSTGEREYYVKWKELTYDECTWENDSDIAVFQPQIERFN---------EI 253

Query: 718  QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNV 777
            Q+ +K +++      K      EI    E P+ L GG L P+QLE LN+LR  W+ +K V
Sbjct: 254  QSRRKKSTD------KCKSVTREIRQYKESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRV 307

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKL-PCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
            IL DEMGLGKT+ + AF+ SL+ +   KL P LV+ PLST+ NW  EFA WAP +NVV Y
Sbjct: 308  ILGDEMGLGKTIQSIAFLGSLFVD---KLGPHLVVAPLSTLRNWEREFATWAPQMNVVMY 364

Query: 837  HGCAKARAIIRQYEWH------------ASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
             G A +R IIR+YE++             S P N +KK S  KF+VLLT+YEMI  DS+ 
Sbjct: 365  FGSAASREIIRKYEFYYPKEKPKKLKKKKSSPSNEDKKQSRIKFDVLLTSYEMINMDSTV 424

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L+ + WE ++VDEGHRLKN  SKLF  L  +  +HRVLLTGTP+QNN+ E++ L++FL+ 
Sbjct: 425  LKTIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEG 484

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
             SF S++  +E+F D+   ++VE+L  ++ PH+LRR KKD M+ +PPK E ++ VEL+S 
Sbjct: 485  DSFGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSK 544

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHE 1064
            Q EYY+A+LTKNY++L     G    S++N+VM+LRK+C H ++    E  + S E L  
Sbjct: 545  QKEYYKAILTKNYEVLTRRSGG--HVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRR 602

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            + +++S K+ LL  M+  L ++GHRVLI+SQ   +LD+LEDYL+  +   +YER+DG + 
Sbjct: 603  L-LESSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLS--YRKWSYERIDGKIG 659

Query: 1125 VGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
              +RQ  I RFN ++ +RF FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM RAH
Sbjct: 660  GAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAH 719

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK--SGS---QKEVEDILRWGT 1238
            R+GQ+ ++++YRLV R ++EER++QL KKK++L+ L V +   G+   Q+E++DI+R G+
Sbjct: 720  RLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTKGTNIVQEELDDIIRHGS 779

Query: 1239 EELFNDSPGINGK 1251
            +ELF+D     GK
Sbjct: 780  KELFDDENDEAGK 792



 Score = 43.1 bits (100), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 7/58 (12%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSI 135
           C  C    NL+ C +C   +H +CL P L  I + KW CP+C      + P++ ++ I
Sbjct: 64  CQKCGENDNLVPCSTCTYAFHRKCLVPRLN-ITSDKWSCPEC------VSPLTEMEKI 114


>gi|363741929|ref|XP_003642567.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Gallus
            gallus]
          Length = 1947

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 348/848 (41%), Positives = 483/848 (56%), Gaps = 108/848 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVINICDER-- 660
            EF VKW G S  H SW+ E QL++       NY+ K          YG+   +   E+  
Sbjct: 500  EFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRK 559

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+++    K G     +KW  LPYD+CTWE +DE
Sbjct: 560  NKDPHYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDIHYLIKWKDLPYDQCTWE-IDE 618

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE-------------IVALTE 746
              +  Y +L  L+       L +D    +    KG   + E              V   +
Sbjct: 619  IDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDK 678

Query: 747  QPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +
Sbjct: 679  QPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHS 738

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN---- 860
            K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D    +    
Sbjct: 739  KGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKV 798

Query: 861  ---KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSF 917
               KK +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS+  
Sbjct: 799  FRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI 858

Query: 918  QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHM 977
             +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ PHM
Sbjct: 859  DYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHM 918

Query: 978  LRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVM 1037
            LRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M
Sbjct: 919  LRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLNIMM 977

Query: 1038 QLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFS 1094
             L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L   GHRVLIFS
Sbjct: 978  DLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFS 1037

Query: 1095 QMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGL 1153
            QMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+ GL
Sbjct: 1038 QMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1095

Query: 1154 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKK 1213
            GINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AK+K
Sbjct: 1096 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRK 1155

Query: 1214 LMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRD 1266
            +ML  L V     +KSGS  ++E++DIL++GTEELF D   + G        ++ +AV  
Sbjct: 1156 MMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD--VEGMVSQGQRLTMPDAVTP 1213

Query: 1267 LEQKHRKRGGGL-------------GDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGS 1313
                   +GG +             GD   +K  + S+ I +D+ AI++LLDR+   +  
Sbjct: 1214 FSDTLSTKGGAVTPGMKKKHGGTPPGD---NKDVDDSSVIHYDDAAISKLLDRNQDATDD 1270

Query: 1314 TDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIEE 1371
            T+L      N+ L S K  ++   EE   ++ E  +            ++EEN    ++ 
Sbjct: 1271 TELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII-----------KQEEN----VDP 1312

Query: 1372 NEWDRLLR 1379
            + W++LLR
Sbjct: 1313 DYWEKLLR 1320



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 409 CRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCT 451



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 4/61 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLK 127
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  Q +
Sbjct: 327 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWE 386

Query: 128 P 128
           P
Sbjct: 387 P 387


>gi|410907027|ref|XP_003966993.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Takifugu
            rubripes]
          Length = 2102

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 347/843 (41%), Positives = 480/843 (56%), Gaps = 125/843 (14%)

Query: 605  VKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT--- 651
            +KG+A   EF VK V +S  H +WI E QL++       NY+ K          YG+   
Sbjct: 566  MKGRA-EREFFVKLVAQSYWHCTWITELQLEIFHSVMYRNYQRKTDMDEPPSLDYGSGGE 624

Query: 652  ---TVINICDERWKQPQ---------------------RVISLRSSKDGTREAFVKWTGL 687
               TV+     R K PQ                     R+I+    K G     VKW  L
Sbjct: 625  DENTVLKSEKRRAKDPQYAILEDKYYRYGIKPEWMMIHRIINHSVDKKGIYHYLVKWKDL 684

Query: 688  PYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE------- 740
             YD+CTWE+ D+  +  ++     + +     +K+D  + +  R KG   + E       
Sbjct: 685  TYDQCTWER-DDMDIPDFAIYKKNYWRHRDAIMKEDPDKPKRMRNKGQEGEEESPASPVT 743

Query: 741  --IVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFIS 796
               +   EQP+ +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ 
Sbjct: 744  DPTIKYEEQPDFVTATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLY 803

Query: 797  SLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDP 856
            SL+ E   K P LV  PLST+ NW  EF +WAP+  VV Y G   +RAIIR+ E+   D 
Sbjct: 804  SLFKEGHTKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAIIRENEFCFDDT 863

Query: 857  D-NLNKKT------SSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLF 909
                 KKT      +  KF+VLLT+YE++  D + L+ + W  LVVDE HRLKN+ SK F
Sbjct: 864  AVKAGKKTFKLRREAPIKFHVLLTSYELVTIDQTALKSIEWACLVVDEAHRLKNNQSKFF 923

Query: 910  SLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEEL 969
              LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L
Sbjct: 924  RRLNDYKIDHKLLLTGTPLQNNLEELFHLLNFLTPNRFNNLEGFLEEFADISKEDQIKKL 983

Query: 970  KKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQ 1029
              L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LTKN++ L + G G  Q
Sbjct: 984  HDLLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKHILTKNFEALNSKGGG-NQ 1042

Query: 1030 QSMLNIVMQLRKVCNHPYLIPGTEPDSGSV---EFLHEMRIKASAKLTLLHSMLKVLYKE 1086
             S+LNI+M L+K CNHPYL P    ++       +      KAS KLTLL  ML+ L ++
Sbjct: 1043 VSLLNIMMDLKKCCNHPYLFPAASMEAQKTPTGAYEGSALTKASGKLTLLQKMLRKLKEQ 1102

Query: 1087 GHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFL 1145
            GHRVL+FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FL
Sbjct: 1103 GHRVLVFSQMTKMLDLLEDFLDHE-GYK-YERIDGGITGALRQEAIDRFNAPGACQFCFL 1160

Query: 1146 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEER 1205
            LSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEER
Sbjct: 1161 LSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEER 1220

Query: 1206 ILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNT 1258
            I Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D          EN++
Sbjct: 1221 ITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD----------ENSS 1270

Query: 1259 SIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAE 1318
                                    +DK  +  + I +D  AI RLLDRS      TD A+
Sbjct: 1271 ------------------------KDKVEDEGSVIHYDSTAIERLLDRSQ---DDTDDAD 1303

Query: 1319 GDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIEENEWDR 1376
                N+ L S K  ++   EE   ++ E  +            ++EEN    ++ + W++
Sbjct: 1304 VQNMNEYLSSFKVAQYMVREEDKTEEIEREII-----------KQEEN----VDPDYWEK 1348

Query: 1377 LLR 1379
            LLR
Sbjct: 1349 LLR 1351



 Score = 79.3 bits (194), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 45/67 (67%)

Query: 54  RLKNEINADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGK 113
           R+ +E++    +  ++ +D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+
Sbjct: 459 RVISEVSLGVPTGAEEEDDDHMEFCRVCKDGGELLCCDTCTSSYHIHCLNPPLPEIPNGE 518

Query: 114 WQCPKCT 120
           W CP+CT
Sbjct: 519 WLCPRCT 525



 Score = 71.2 bits (173), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CL+P L + P GKW CP C ++  Q
Sbjct: 384 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDKAPEGKWSCPHCEKEGIQ 441


>gi|397503175|ref|XP_003822207.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Pan paniscus]
          Length = 1957

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 348/862 (40%), Positives = 487/862 (56%), Gaps = 108/862 (12%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP++     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 497  EPSLPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 555

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 556  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLI 615

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA-------------SEDEL 729
            KW  LPYD+CTWE +D+  +  Y +L   +       L +D               +D+ 
Sbjct: 616  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQ 674

Query: 730  PRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
             +          V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGK
Sbjct: 675  EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGK 734

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR
Sbjct: 735  TVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 794

Query: 848  QYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            + E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE HR
Sbjct: 795  ENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHR 854

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+
Sbjct: 855  LKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADI 914

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
            +   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L
Sbjct: 915  SKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL 974

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLH 1077
             + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL LL 
Sbjct: 975  NSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQ 1033

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN 
Sbjct: 1034 KMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNA 1091

Query: 1138 DKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
              + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR 
Sbjct: 1092 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1151

Query: 1197 VVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGIN 1249
            V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D     
Sbjct: 1152 VTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD----- 1206

Query: 1250 GKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDENA 1299
              D+    +  +  V  +      +GG L    +          +K  E S+ I +D+ A
Sbjct: 1207 --DVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGDNKDVEDSSVIHYDDAA 1264

Query: 1300 IARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAEN 1357
            I++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +          
Sbjct: 1265 ISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII--------- 1312

Query: 1358 SERKEENAVTGIEENEWDRLLR 1379
              ++EEN    ++ + W++LLR
Sbjct: 1313 --KQEEN----VDPDYWEKLLR 1328



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 422 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 464



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 335 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 394

Query: 125 QLKP 128
           Q +P
Sbjct: 395 QWEP 398


>gi|189458814|ref|NP_083492.2| chromodomain helicase DNA binding protein 5 isoform 2 [Mus musculus]
          Length = 1915

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 347/838 (41%), Positives = 473/838 (56%), Gaps = 130/838 (15%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            EF VKW G S  H SW+ E QL++       NY+ K          YG+           
Sbjct: 512  EFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRK 571

Query: 652  ---TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                +    +ER         W    R+++    K G     +KW  LPYD+CTWE +DE
Sbjct: 572  NKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFDKKGDIHYLIKWKDLPYDQCTWE-IDE 630

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK------- 752
              +  Y +L   +       L +DA    LP+      +       E+P +         
Sbjct: 631  IDIPYYDNLKQAYWGHRELMLGEDA---RLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVK 687

Query: 753  -----------GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCE 801
                       GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E
Sbjct: 688  FDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKE 747

Query: 802  FKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN- 860
              +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D      
Sbjct: 748  GHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRGG 807

Query: 861  ------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNS 914
                  KK    KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS
Sbjct: 808  KKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 867

Query: 915  FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVA 974
            +   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ 
Sbjct: 868  YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLG 927

Query: 975  PHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLN 1034
            PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LN
Sbjct: 928  PHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLN 986

Query: 1035 IVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVL 1091
            I+M L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L  EGHRVL
Sbjct: 987  IMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVL 1046

Query: 1092 IFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRS 1150
            IFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+
Sbjct: 1047 IFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRA 1104

Query: 1151 CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLA 1210
             GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+A
Sbjct: 1105 GGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVA 1164

Query: 1211 KKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEA 1263
            K+K+ML  L V     +KSGS  ++E++DIL++GTEELF D                   
Sbjct: 1165 KRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD------------------- 1205

Query: 1264 VRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEN 1323
              D+E          GD   +K  E S+ I +D+ AI++LLDR+   +  T+L      N
Sbjct: 1206 --DVE----------GD---NKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQN---MN 1247

Query: 1324 DMLGSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIEENEWDRLLR 1379
            + L S K  ++   EE   ++ E  V            ++EEN    ++ + W++LLR
Sbjct: 1248 EYLSSFKVAQYVVREEDGVEEVEREVI-----------KQEEN----VDPDYWEKLLR 1290



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 421 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 463



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 335 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 394

Query: 125 QLKP 128
           Q +P
Sbjct: 395 QWEP 398


>gi|348530512|ref|XP_003452755.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Oreochromis
            niloticus]
          Length = 1950

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 336/789 (42%), Positives = 457/789 (57%), Gaps = 102/789 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVINICDER-- 660
            EF  KW   S  H SW+ E QL++  +    NY+ K          +G    + C +R  
Sbjct: 536  EFFAKWCNMSYWHCSWVTELQLELHCQVMFRNYQRKNDMEEPPPIDFGEGEEDKCVKRKS 595

Query: 661  --------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK--LD 698
                                W    R+++    +       +KW  LPYD+ TWE   +D
Sbjct: 596  KDPMYTHLEEKYLRFGIKMEWLMIHRILNHSVDRKNNVHYLIKWRELPYDQATWEAEDMD 655

Query: 699  EPAL----EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEI---VALTEQPEEL 751
             P      ++Y +  +L +  E +  KK   +  + R +   +   I   +    QPE L
Sbjct: 656  IPEYDTYKQQYWNHRELMMGEEGRPGKKIKVKGRVKRPERPPENPVIDPTIKFERQPEYL 715

Query: 752  --KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
               GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K P L
Sbjct: 716  DSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFL 775

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNLNKK 862
            V  PLST+ NW  EF +WAP++ VV Y G   +RA+IR+ E+   D         +  KK
Sbjct: 776  VSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEDNAVRGGKKASRLKK 835

Query: 863  TSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVL 922
              S KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN++S QH++L
Sbjct: 836  DVSIKFHVLLTSYELITIDMAVLGSIDWACLVVDEAHRLKNNQSKFFRVLNNYSLQHKLL 895

Query: 923  LTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLK 982
            LTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLRRLK
Sbjct: 896  LTGTPLQNNLEELFHLLNFLTPERFSNLEIFLEEFADIAKEDQIKKLHDMLGPHMLRRLK 955

Query: 983  KDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKV 1042
             D  +++P KTE +V VELS +Q +YY+ +LTKN++ L   G G  Q S+LN+VM L+K 
Sbjct: 956  ADVFKHMPSKTELIVRVELSQLQKKYYKFILTKNFEALNTKGGG-NQVSLLNVVMDLKKC 1014

Query: 1043 CNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKL 1099
            CNHPYL PG     P   +  +     IK+S KL LL  M++ L + GHRVL+FSQMTK+
Sbjct: 1015 CNHPYLFPGAAMEAPKMPNGMYDGNALIKSSGKLMLLQKMMRKLKEGGHRVLVFSQMTKM 1074

Query: 1100 LDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLA 1158
            LD+LED+L  E G K YER+DG ++ G RQ AI RFN   + +F FLLSTR+ GLGINLA
Sbjct: 1075 LDLLEDFLENE-GYK-YERIDGGITGGMRQEAIDRFNAPGAQQFAFLLSTRAGGLGINLA 1132

Query: 1159 TADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ 1218
            TADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V +ASVEERI Q+AKKK+ML  
Sbjct: 1133 TADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKMMLTH 1192

Query: 1219 LFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKH 1271
            L V     +K+G  S++E++DIL++GTEELF D      +  GEN               
Sbjct: 1193 LVVRPGLGSKTGSMSKQELDDILKFGTEELFKD------EGEGENK-------------- 1232

Query: 1272 RKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKA 1331
                            E S+ I +D+ AI RLLDR+     +TD  E    N+ L S K 
Sbjct: 1233 ---------------EEDSSIIHYDDKAIERLLDRNQ---DATDDTELQSMNEYLSSFKV 1274

Query: 1332 TEWNEETTE 1340
             ++ EE  +
Sbjct: 1275 AQYVEEEVQ 1283



 Score = 80.9 bits (198), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 36/49 (73%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +D +   C +C  GG LLCCDSCP +YH+ CL+PPL  IPNG+W CP+C
Sbjct: 439 DDHHMEFCRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRC 487



 Score = 70.1 bits (170), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P G W CP C ++  Q
Sbjct: 359 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCEKEGIQ 416


>gi|449486846|ref|XP_004174324.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 5 [Taeniopygia guttata]
          Length = 2088

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 346/845 (40%), Positives = 481/845 (56%), Gaps = 102/845 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            EF VKW G S  H SW+ E QL++       NY+ K          YG+           
Sbjct: 435  EFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDNQREKRK 494

Query: 652  ---TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                     +ER         W    R+++    K G     +KW  LPYD+CTWE +D+
Sbjct: 495  NKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDIHYLIKWKDLPYDQCTWE-IDD 553

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE-------------IVALTE 746
              +  Y +L  L+       L +D    +    KG   + E              V   +
Sbjct: 554  IDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDK 613

Query: 747  QPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +
Sbjct: 614  QPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHS 673

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN---- 860
            K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D    +    
Sbjct: 674  KGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKV 733

Query: 861  ---KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSF 917
               KK +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS+  
Sbjct: 734  FRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI 793

Query: 918  QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHM 977
             +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ PHM
Sbjct: 794  DYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHM 853

Query: 978  LRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVM 1037
            LRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M
Sbjct: 854  LRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLNIMM 912

Query: 1038 QLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFS 1094
             L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L   GHRVLIFS
Sbjct: 913  DLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFS 972

Query: 1095 QMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGL 1153
            QMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+ GL
Sbjct: 973  QMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1030

Query: 1154 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKK 1213
            GINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AK+K
Sbjct: 1031 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRK 1090

Query: 1214 LMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRD 1266
            +ML  L V     +KSGS  ++E++DIL++GTEELF D   + G        ++ +AV  
Sbjct: 1091 MMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD--VEGMVSQGQRIAMPDAVTP 1148

Query: 1267 LEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDENAIARLLDRSNLQSGSTDL 1316
                   +GG      +          +K  + S+ I +D+ AI++LLDR+   +  T+L
Sbjct: 1149 FSDTLSTKGGAAAPGMKKKHGSTPPGDNKDVDDSSVIHYDDAAISKLLDRNQDATDDTEL 1208

Query: 1317 AEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIEENEW 1374
                  N+ L S K  ++   EE   ++ E  +            ++EEN    ++ + W
Sbjct: 1209 QN---MNEYLSSFKVAQYVVREEDGVEEVEREII-----------KQEEN----VDPDYW 1250

Query: 1375 DRLLR 1379
            ++LLR
Sbjct: 1251 EKLLR 1255



 Score = 74.3 bits (181), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 4/55 (7%)

Query: 71  NDGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQ 121
            DGY  +    C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C Q
Sbjct: 331 GDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCPQ 385


>gi|426327635|ref|XP_004024622.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Gorilla
            gorilla gorilla]
          Length = 2024

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 348/862 (40%), Positives = 487/862 (56%), Gaps = 108/862 (12%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP++     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 564  EPSLPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 622

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 623  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLI 682

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA-------------SEDEL 729
            KW  LPYD+CTWE +D+  +  Y +L   +       L +D               +D+ 
Sbjct: 683  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQ 741

Query: 730  PRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
             +          V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGK
Sbjct: 742  EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGK 801

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR
Sbjct: 802  TVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 861

Query: 848  QYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            + E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE HR
Sbjct: 862  ENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHR 921

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+
Sbjct: 922  LKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADI 981

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
            +   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L
Sbjct: 982  SKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL 1041

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLH 1077
             + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL LL 
Sbjct: 1042 NSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQ 1100

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN 
Sbjct: 1101 KMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNA 1158

Query: 1138 DKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
              + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR 
Sbjct: 1159 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1218

Query: 1197 VVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGIN 1249
            V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D     
Sbjct: 1219 VTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD----- 1273

Query: 1250 GKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDENA 1299
              D+    +  +  V  +      +GG L    +          +K  E S+ I +D+ A
Sbjct: 1274 --DVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGDNKDVEDSSVIHYDDAA 1331

Query: 1300 IARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAEN 1357
            I++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +          
Sbjct: 1332 ISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII--------- 1379

Query: 1358 SERKEENAVTGIEENEWDRLLR 1379
              ++EEN    ++ + W++LLR
Sbjct: 1380 --KQEEN----VDPDYWEKLLR 1395



 Score = 81.3 bits (199), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 489 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 531



 Score = 75.1 bits (183), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 403 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 462

Query: 125 QLKP 128
           Q +P
Sbjct: 463 QWEP 466


>gi|403297789|ref|XP_003939734.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Saimiri
            boliviensis boliviensis]
          Length = 2203

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 349/862 (40%), Positives = 488/862 (56%), Gaps = 108/862 (12%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP++     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 744  EPSLPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 802

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    RV++    K G     +
Sbjct: 803  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKAEWMMIHRVLNHSFDKKGDVHYLI 862

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA-------------SEDEL 729
            KW  LPYD+CTWE +D+  +  Y +L   +       L +D+              +D+ 
Sbjct: 863  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDSRLPKRLLKKGKKLRDDKQ 921

Query: 730  PRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
             +          V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGK
Sbjct: 922  EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGK 981

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR
Sbjct: 982  TVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 1041

Query: 848  QYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            + E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE HR
Sbjct: 1042 ENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHR 1101

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+
Sbjct: 1102 LKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADI 1161

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
            +   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L
Sbjct: 1162 SKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL 1221

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLH 1077
             + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL LL 
Sbjct: 1222 NSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQ 1280

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN 
Sbjct: 1281 KMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNA 1338

Query: 1138 DKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
              + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR 
Sbjct: 1339 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1398

Query: 1197 VVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGIN 1249
            V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D     
Sbjct: 1399 VTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD----- 1453

Query: 1250 GKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDENA 1299
              D+    +  +  V  +      +GG L    +          +K  E S+ I +D+ A
Sbjct: 1454 --DVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGDNKDVEDSSVIHYDDAA 1511

Query: 1300 IARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAEN 1357
            I++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +          
Sbjct: 1512 ISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII--------- 1559

Query: 1358 SERKEENAVTGIEENEWDRLLR 1379
              ++EEN    ++ + W++LLR
Sbjct: 1560 --KQEEN----VDPDYWEKLLR 1575



 Score = 80.9 bits (198), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 669 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 711



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 583 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 642

Query: 125 QLKP 128
           Q +P
Sbjct: 643 QWEP 646


>gi|193787140|dbj|BAG52346.1| unnamed protein product [Homo sapiens]
          Length = 979

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 345/848 (40%), Positives = 477/848 (56%), Gaps = 113/848 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            EF VKW G S  H SW+ E QL++       NY+ K          YG+           
Sbjct: 26   EFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRK 85

Query: 652  ---TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                +    +ER         W    R+++    K G     +KW  LPYD+CTWE +D+
Sbjct: 86   NKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWE-IDD 144

Query: 700  PALEKYSHLTDLFVQFERQTLKKDA-------------SEDELPRGKGDCQQSEIVALTE 746
              +  Y +L   +       L +D               +D+  +          V   +
Sbjct: 145  IDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKREKPPDTPIVDPTVKFDK 204

Query: 747  QPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +
Sbjct: 205  QPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHS 264

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN---- 860
            K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D    +    
Sbjct: 265  KGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFGDNAIRSGKKV 324

Query: 861  ---KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSF 917
               KK    KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS+  
Sbjct: 325  FRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI 384

Query: 918  QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHM 977
             +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   +++ L  L+ PHM
Sbjct: 385  DYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKRLHDLLGPHM 444

Query: 978  LRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVM 1037
            LRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M
Sbjct: 445  LRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLNIMM 503

Query: 1038 QLRKVCNHPYLIPGTEPDS-----GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
             L+K CNHPYL P    ++     GS +      +K+S KL LL  MLK L  EGHRVLI
Sbjct: 504  DLKKCCNHPYLFPVAAVEAPVLPNGSND--GSSLVKSSGKLMLLQKMLKKLRDEGHRVLI 561

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+ 
Sbjct: 562  FSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAS 619

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AK
Sbjct: 620  GLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAK 679

Query: 1212 KKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +KSGS  ++E++DIL++GTEELF D       D+    +  +  V
Sbjct: 680  RKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD-------DVEGMMSQGQRPV 732

Query: 1265 RDLEQKHRKRGGGL-------------GDVYQDKCTEGSTKIVWDENAIARLLDRSNLQS 1311
              +      +GG L             GD   +K  E S+ I +D+ AI++LLDR+   +
Sbjct: 733  TPIPDVQSSKGGNLAASAKKKHGSTPPGD---NKDVEDSSVIHYDDAAISKLLDRNQDAT 789

Query: 1312 GSTDLAEGDLENDMLGSVKATEWNEETTEDQAESPVAAVDDASAENSERKEENAVTGIEE 1371
              T+L      N+ L S K  ++                ++   E  ER+       ++ 
Sbjct: 790  DDTELQN---MNEYLSSFKVAQY-------------VVREEDGVEGVEREIIKQEENVDP 833

Query: 1372 NEWDRLLR 1379
            + W++LLR
Sbjct: 834  DYWEKLLR 841


>gi|395526186|ref|XP_003765249.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Sarcophilus
            harrisii]
          Length = 2043

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 348/849 (40%), Positives = 483/849 (56%), Gaps = 109/849 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            EF VKW G S  H SW+ E QL++       NY+ K          YG+           
Sbjct: 512  EFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEEGKSEKRK 571

Query: 652  ---TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                     +ER         W    R+++    K G     +KW  LPYD+CTWE +D+
Sbjct: 572  NKDPHYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWE-IDD 630

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE-------------IVALTE 746
              +  Y +L   +       L +D+   +    KG   + +              V   +
Sbjct: 631  IDIPYYENLKQGYWNHRELMLGEDSRPPKRLNKKGKKLKDDKLEKPPETPLVDPTVKFDK 690

Query: 747  QPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    ++ SLY E  +
Sbjct: 691  QPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVYLYSLYKEGHS 750

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN---- 860
            K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D    +    
Sbjct: 751  KGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKV 810

Query: 861  ---KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSF 917
               KK +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS+  
Sbjct: 811  FRMKKEAQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI 870

Query: 918  QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHM 977
             +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ PHM
Sbjct: 871  DYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHM 930

Query: 978  LRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVM 1037
            LRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M
Sbjct: 931  LRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLNIMM 989

Query: 1038 QLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFS 1094
             L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L  EGHRVLIFS
Sbjct: 990  DLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFS 1049

Query: 1095 QMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGL 1153
            QMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+ GL
Sbjct: 1050 QMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1107

Query: 1154 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKK 1213
            GINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AK+K
Sbjct: 1108 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRK 1167

Query: 1214 LMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRD 1266
            +ML  L V     +KSGS  ++E++DIL++GTEELF D   + G        ++ E V  
Sbjct: 1168 MMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD--VEGMMPQGQRINVPEPVAP 1225

Query: 1267 LEQKHRKRGGGL--------------GDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSG 1312
                   +GGG               GD   +K  E S+ I +D+ AI++LLDR+   + 
Sbjct: 1226 APDVQASKGGGTLAAGVKKKHGSTPPGD---NKDVEDSSVIHYDDAAISKLLDRNQDATD 1282

Query: 1313 STDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIE 1370
             T+L      N+ L S K  ++   EE   ++ E  +            ++EEN    ++
Sbjct: 1283 DTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII-----------KQEEN----VD 1324

Query: 1371 ENEWDRLLR 1379
             + W++LLR
Sbjct: 1325 PDYWEKLLR 1333



 Score = 81.3 bits (199), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 421 CRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCT 463



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 4/62 (6%)

Query: 71  NDGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQL 126
            DGY  +    C +C  GG ++ CD+CPR YHL CLDP +++ P GKW CP C ++  Q 
Sbjct: 338 GDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPEMEKAPEGKWSCPHCEKEGIQW 397

Query: 127 KP 128
           +P
Sbjct: 398 EP 399


>gi|224092566|ref|XP_002309665.1| chromatin remodeling complex subunit [Populus trichocarpa]
 gi|222855641|gb|EEE93188.1| chromatin remodeling complex subunit [Populus trichocarpa]
          Length = 1340

 Score =  565 bits (1455), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 324/760 (42%), Positives = 454/760 (59%), Gaps = 97/760 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQ-LKVLA-----KRKLENYKAKYGTT------VINICDER 660
            ++LVKW G S +H +W+PE + LK        K K+ N+  +  +        + I  E 
Sbjct: 131  QYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLKTKVNNFNRQMASNNNSEDEFVAIRPE- 189

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE-----KLDEPALEKYSHLTDLFVQF 715
            W    R+++ R  +D  +E  VK+  LPYDEC WE        +P +EK++ +     + 
Sbjct: 190  WTTVDRILACRGDED-EKEYLVKYKELPYDECYWEFESDVSAFQPEIEKFNKIQS---RS 245

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG--------GALFPHQLEALNWL 767
             + + +K + +D     K   +  E       PE L G        G+L P+QLE LN+L
Sbjct: 246  HKPSKQKSSLQDATDSKK---KSKEFQQCDHSPEFLSGVLFFSVIEGSLHPYQLEGLNFL 302

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
            R  W K  +VILADEMGLGKT+ + AF++SL  E  +  P LV+ PLST+ NW  EFA W
Sbjct: 303  RFSWSKQTHVILADEMGLGKTIQSIAFLASLREEGIS--PYLVVAPLSTLRNWEREFATW 360

Query: 828  APNLNVVEYHGCAKARAIIRQYEWH-----------ASDPDNLNKKTSSYKFNVLLTTYE 876
            AP +NVV Y G A+ARA+IR+YE++            S       K    KF+VLLT+YE
Sbjct: 361  APQMNVVMYVGSAQARAVIREYEFYYPKNHKKIKKKKSGQVVTESKQDRIKFDVLLTSYE 420

Query: 877  MILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMY 936
            MI  DS+ L+ + WE ++VDEGHRLKN  SKLF  L  +   HRVLLTGTPLQNN+ E++
Sbjct: 421  MINLDSTSLKPIKWECMIVDEGHRLKNKDSKLFLSLKQYCSNHRVLLTGTPLQNNLDELF 480

Query: 937  NLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERM 996
             L++FL    F SL  F+E+F D+   +++  L K++APH+LRR+KKD M+ +PPK E +
Sbjct: 481  MLMHFLDAGKFASLEEFQEEFKDINQEEQILRLHKMLAPHLLRRVKKDVMKELPPKKELI 540

Query: 997  VPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS 1056
            + +ELSS Q EYY+A+LT+NYQIL    +G AQ S++N+VM+LRK+C HPY++ G EPD 
Sbjct: 541  LRIELSSKQKEYYKAILTRNYQILTR--RGGAQISLINVVMELRKLCCHPYMLEGVEPDI 598

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
                      ++ S KL LL  ++  L ++GHRVLI+SQ   +LD+LEDY         Y
Sbjct: 599  EDTNESFRQLLETSGKLQLLDKLMVRLKEQGHRVLIYSQFQHMLDLLEDYCT--HKKWMY 656

Query: 1117 ERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            ER+DG V   +RQ  I RFN ++ SRF FLLSTR+ GLGINLATADTVIIYDSD+NPHAD
Sbjct: 657  ERIDGKVGGAERQVRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHAD 716

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----SGSQKEVE 1231
            +QAM RAHR+GQ+ ++L+YRL+ R ++EER++QL KKK++L+ L V +    + +Q+E++
Sbjct: 717  LQAMARAHRLGQTNKVLIYRLITRGTIEERMMQLTKKKMVLEHLVVGRLKAQNINQEELD 776

Query: 1232 DILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGST 1291
            DI+R+G++ELF D     GK                                      S 
Sbjct: 777  DIIRYGSKELFADENDEAGK--------------------------------------SR 798

Query: 1292 KIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKA 1331
            +I +D+ AI RLLDR   Q G  + +  D E D  G +KA
Sbjct: 799  QIHYDDAAIDRLLDRE--QVGDEETSLDDEEED--GFLKA 834



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 20/163 (12%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQK-ND-------QLKPI 129
           C  C    NLL C++C   YH +CL PPLK      W+CP+C    ND       +++P 
Sbjct: 53  CQACGESENLLNCETCTYAYHSKCLLPPLKAPFPSNWRCPECVSPLNDIDKLLDCEMRPT 112

Query: 130 SNLDSISKRARSKIITIKSQSGVKSSGADKVSQIFGNSILARK--RSNKGKSVLALGVKS 187
              DS + +  SK I +K Q  VK  G   +S +    +  ++  ++ K    L   V +
Sbjct: 113 VADDSDASKLGSKQIFVK-QYLVKWKG---LSYLHCTWVPEKEFLKAFKSNPRLKTKVNN 168

Query: 188 LEKSLDSSQ--VDVSCSTKPENTSAGVPVEGSSSCPNDDDEKQ 228
             + + S+    D   + +PE T+    V+   +C  D+DEK+
Sbjct: 169 FNRQMASNNNSEDEFVAIRPEWTT----VDRILACRGDEDEKE 207


>gi|395731282|ref|XP_002811619.2| PREDICTED: chromodomain-helicase-DNA-binding protein 5, partial
            [Pongo abelii]
          Length = 1588

 Score =  564 bits (1454), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 350/865 (40%), Positives = 488/865 (56%), Gaps = 114/865 (13%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP++     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 204  EPSLPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 262

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 263  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLI 322

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA-------------SEDEL 729
            KW  LPYD+CTWE +D+  +  Y +L   +       L +D               +D+ 
Sbjct: 323  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQ 381

Query: 730  PRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
             +          V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGK
Sbjct: 382  EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGK 441

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR
Sbjct: 442  TVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 501

Query: 848  QYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            + E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE HR
Sbjct: 502  ENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHR 561

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+
Sbjct: 562  LKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADI 621

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
            +   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L
Sbjct: 622  SKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL 681

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLH 1077
             + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL LL 
Sbjct: 682  NSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQ 740

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN 
Sbjct: 741  KMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNA 798

Query: 1138 DKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
              + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR 
Sbjct: 799  PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 858

Query: 1197 VVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGIN 1249
            V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D     
Sbjct: 859  VTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD----- 913

Query: 1250 GKDMGENNTSIEEAVRDLEQKHRKRGGGL-------------GDVYQDKCTEGSTKIVWD 1296
              D+    +  +  V  +      +GG L             GD   +K  E S+ I +D
Sbjct: 914  --DVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGD---NKDVEDSSVIHYD 968

Query: 1297 ENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDAS 1354
            + AI++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +       
Sbjct: 969  DAAISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII------ 1019

Query: 1355 AENSERKEENAVTGIEENEWDRLLR 1379
                 ++EEN    ++ + W++LLR
Sbjct: 1020 -----KQEEN----VDPDYWEKLLR 1035



 Score = 80.9 bits (198), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 129 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 171



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 43  DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 102

Query: 125 QLKP 128
           Q +P
Sbjct: 103 QWEP 106


>gi|301776989|ref|XP_002923917.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like
            [Ailuropoda melanoleuca]
          Length = 1948

 Score =  564 bits (1453), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 351/869 (40%), Positives = 486/869 (55%), Gaps = 121/869 (13%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP V     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 492  EPGVPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 550

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 551  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLI 610

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIV 742
            KW  LPYD+CTWE +D+  +  Y +L   +       L +DA    LP+      +    
Sbjct: 611  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDA---RLPKRLVKKGKKLKD 666

Query: 743  ALTEQPEELK------------------GGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
               E+P +                    GG L P+QLE LNWLR  W +  + ILADEMG
Sbjct: 667  DKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG 726

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKTV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R+
Sbjct: 727  LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 786

Query: 845  IIRQYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            +IR+ E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE
Sbjct: 787  VIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDE 846

Query: 898  GHRLKNSGSK-LFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEK 956
             HRLKN+  K  F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+
Sbjct: 847  AHRLKNNQPKSFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE 906

Query: 957  FNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKN 1016
            F D++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N
Sbjct: 907  FADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRN 966

Query: 1017 YQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKL 1073
            ++ L + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL
Sbjct: 967  FEALNSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1025

Query: 1074 TLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAIT 1133
             LL  MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI 
Sbjct: 1026 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAID 1083

Query: 1134 RFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLL 1192
            RFN   + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K+++
Sbjct: 1084 RFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVM 1143

Query: 1193 VYRLVVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDS 1245
            +YR V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D 
Sbjct: 1144 IYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD- 1202

Query: 1246 PGINGKDMGENNTSIEEAVRDLEQKHRKRGGGL-------------GDVYQDKCTEGSTK 1292
                  D+    +  +  V  +      +GG L             GD   +K  E S+ 
Sbjct: 1203 ------DVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGD---NKDVEDSSV 1253

Query: 1293 IVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAV 1350
            I +D+ AI++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +   
Sbjct: 1254 IHYDDAAISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII-- 1308

Query: 1351 DDASAENSERKEENAVTGIEENEWDRLLR 1379
                     ++EEN    ++ + W++LLR
Sbjct: 1309 ---------KQEEN----VDPDYWEKLLR 1324



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 334 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 393

Query: 125 QLKP 128
           Q +P
Sbjct: 394 QWEP 397



 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG LLCCD+CP +YHL C   P   +  G   CP+C
Sbjct: 420 CRVCKDGGELLCCDACPSSYHLHCXT-PTPTLNLGTLLCPQC 460


>gi|334328751|ref|XP_003341117.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like
            [Monodelphis domestica]
          Length = 1730

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 337/802 (42%), Positives = 463/802 (57%), Gaps = 92/802 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVINICDER-- 660
            EF VKW G S  H SW+ E QL++       NY+ K          YG+   +   E+  
Sbjct: 483  EFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRK 542

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+++    K G     +KW  LPYD+CTWE +D+
Sbjct: 543  NKDPHYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWE-IDD 601

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE-------------IVALTE 746
              +  Y +L   +       L +D+   +    KG   + +              V   +
Sbjct: 602  IDIPYYENLKQGYWNHRELMLGEDSRPPKRLNKKGKKLKDDKLEKPPETPLVDPTVKFDK 661

Query: 747  QPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    ++ SLY E  +
Sbjct: 662  QPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVYLYSLYKEGHS 721

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN---- 860
            K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D    +    
Sbjct: 722  KGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKV 781

Query: 861  ---KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSF 917
               KK +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS+  
Sbjct: 782  FRMKKEAQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI 841

Query: 918  QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHM 977
             +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ PHM
Sbjct: 842  DYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHM 901

Query: 978  LRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVM 1037
            LRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M
Sbjct: 902  LRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLNIMM 960

Query: 1038 QLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFS 1094
             L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L  EGHRVLIFS
Sbjct: 961  DLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFS 1020

Query: 1095 QMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGL 1153
            QMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+ GL
Sbjct: 1021 QMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1078

Query: 1154 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKK 1213
            GINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AK+K
Sbjct: 1079 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRK 1138

Query: 1214 LMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRD 1266
            +ML  L V     +KSGS  ++E++DIL++GTEELF D   + G        ++ E V  
Sbjct: 1139 MMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD--VEGMMPQGQRINMPEPVAP 1196

Query: 1267 LEQKHRKRGGGL--------------GDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSG 1312
                   +GGG               GD   +K  E S+ I +D+ AI++LLDR+   + 
Sbjct: 1197 APDVQASKGGGTLAAGVKKKHGSTPPGD---NKDVEDSSVIHYDDAAISKLLDRNQDATD 1253

Query: 1313 STDLAEGDLENDMLGSVKATEW 1334
             T+L      N+ L S K  ++
Sbjct: 1254 DTELQN---MNEYLSSFKVAQY 1272


>gi|432883650|ref|XP_004074311.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Oryzias
            latipes]
          Length = 1974

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 334/791 (42%), Positives = 458/791 (57%), Gaps = 103/791 (13%)

Query: 605  VKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVI 654
            +KG+A   EF  KW   S  H SW+ E QL++  +    NY+ K          +G    
Sbjct: 543  LKGRA-EREFFAKWCNMSYWHCSWVSELQLEMHCQVMFRNYQRKNDMDEPPPIDFGEGEE 601

Query: 655  NICDER----------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDEC 692
            + C +R                      W    R+++    +       +KW  LPYD+ 
Sbjct: 602  DKCVKRKSKDPTYVHLEEKYLRFGIKMEWLMIHRILNHSVDRKNNVHYLIKWRELPYDQA 661

Query: 693  TWEKLD------EPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEI---VA 743
            TWE  D      EP  ++Y +  +L +  + +  KK   +  + R +   +   +   + 
Sbjct: 662  TWEAEDMDLPEFEPYKQQYWNHRELMMGDDGRPGKKIKVKGRVKRPERPPENPVVDPTIK 721

Query: 744  LTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCE 801
               QP+ L   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E
Sbjct: 722  FERQPDYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKE 781

Query: 802  FKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPD---- 857
              +K P LV  PLST+ NW  EF +WAP++ VV Y G   +RA+IR+ E+   D      
Sbjct: 782  GHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYIGDKDSRAVIRENEFSFEDNAIRGG 841

Query: 858  ---NLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNS 914
               +  KK SS KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN+
Sbjct: 842  KRASRMKKDSSIKFHVLLTSYELITIDMAALGSIDWACLVVDEAHRLKNNQSKFFRVLNN 901

Query: 915  FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVA 974
            +S QH++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ 
Sbjct: 902  YSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEVFLEEFADIAKEDQIKKLHDMLG 961

Query: 975  PHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLN 1034
            PHMLRRLK D  +++P KTE +V VELS +Q +YY+ +LTKN++ L   G G  Q S+LN
Sbjct: 962  PHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKFILTKNFEALNTKGGG-NQVSLLN 1020

Query: 1035 IVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVL 1091
            +VM L+K CNHPYL P      P   +  +      K+S KL LL  M++ L + GHRVL
Sbjct: 1021 VVMDLKKCCNHPYLFPAAAMEAPKLPNGMYDGSALTKSSGKLMLLQKMMRKLKEGGHRVL 1080

Query: 1092 IFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRS 1150
            +FSQMTK+LD+LED+L  E G K YER+DG ++ G RQ AI RFN   + +F FLLSTR+
Sbjct: 1081 VFSQMTKMLDLLEDFLENE-GYK-YERIDGGITGGMRQEAIDRFNAPGAQQFAFLLSTRA 1138

Query: 1151 CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLA 1210
             GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V +ASVEERI Q+A
Sbjct: 1139 GGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVA 1198

Query: 1211 KKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEA 1263
            KKK+ML  L V     +K+G  S++E++DIL++GTEELF D      +  GEN       
Sbjct: 1199 KKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKD------EGEGENK------ 1246

Query: 1264 VRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEN 1323
                                    E S+ I +D+ AI RLLDR+     +TD  E    N
Sbjct: 1247 -----------------------EEDSSIIHYDDKAIDRLLDRNQ---DATDDTELQSMN 1280

Query: 1324 DMLGSVKATEW 1334
            + L S K  ++
Sbjct: 1281 EYLSSFKVAQY 1291



 Score = 83.6 bits (205), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)

Query: 62  DRSSTKKKGNDGYYYE-CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D   T +   D ++ E C +C  GG LLCCDSCP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 443 DNGETGEMEEDDHHMEFCRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRCT 502



 Score = 70.1 bits (170), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P G W CP C ++  Q
Sbjct: 373 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCEKEGIQ 430


>gi|440908595|gb|ELR58598.1| Chromodomain-helicase-DNA-binding protein 5, partial [Bos grunniens
            mutus]
          Length = 1920

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 348/847 (41%), Positives = 478/847 (56%), Gaps = 114/847 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPE-SQLKVLAKRKLENYKAK----------YGT---------- 651
            EF VKW G S  H SW+ E  QL++       NY+ K          YG+          
Sbjct: 484  EFFVKWAGLSYWHCSWVKELQQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKR 543

Query: 652  ----TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD 698
                 +    +ER         W    R+++    K G     +KW  LPYD+CTWE +D
Sbjct: 544  KNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWE-ID 602

Query: 699  EPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK------ 752
            E  +  Y  L   +       L +DA    LP+      +       E+P +        
Sbjct: 603  EIDIPYYDSLKQAYWGHRELMLGEDA---RLPKRLVKKGKKLKDDKQEKPPDTPIVDPTV 659

Query: 753  ------------GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYC 800
                        GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY 
Sbjct: 660  KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 719

Query: 801  EFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN 860
            E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D    +
Sbjct: 720  EGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRS 779

Query: 861  -------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLN 913
                   KK    KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN
Sbjct: 780  GKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLN 839

Query: 914  SFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLV 973
            S+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+
Sbjct: 840  SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLL 899

Query: 974  APHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSML 1033
             PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+L
Sbjct: 900  GPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLL 958

Query: 1034 NIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRV 1090
            NI+M L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L  EGHRV
Sbjct: 959  NIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRV 1018

Query: 1091 LIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTR 1149
            LIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR
Sbjct: 1019 LIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTR 1076

Query: 1150 SCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQL 1209
            + GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+
Sbjct: 1077 AGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQV 1136

Query: 1210 AKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEE 1262
            AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D   + G  M         
Sbjct: 1137 AKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD--VEG--MMSQGQRPAT 1192

Query: 1263 AVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDENAIARLLDRSNLQSG 1312
             + D++     +GG L    +          +K  E S+ I +D+ AI++LLDR+   + 
Sbjct: 1193 PIPDVQS---SKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATD 1249

Query: 1313 STDLAEGDLENDMLGSVKATEWNEETTEDQAESPVAAVDDASAENSERKEENAVTGIEEN 1372
             T+L      N+ L S K  ++            V   +D   E   ++EEN    ++ +
Sbjct: 1250 DTELQN---MNEYLSSFKVAQY------------VVREEDGEREII-KQEEN----VDPD 1289

Query: 1373 EWDRLLR 1379
             W++LLR
Sbjct: 1290 YWEKLLR 1296



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 393 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 435



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 307 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 366

Query: 125 QLKP 128
           Q +P
Sbjct: 367 QWEP 370


>gi|327289025|ref|XP_003229225.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Anolis
            carolinensis]
          Length = 2037

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 346/835 (41%), Positives = 473/835 (56%), Gaps = 123/835 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            EF  KW G S  H SW+ E QL++       NY+ K          YG+           
Sbjct: 519  EFFAKWAGLSYWHCSWVKELQLELYHTVMFRNYQRKNDMDDPPPFDYGSGDEDGKIEKRK 578

Query: 652  ---TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE--KL 697
                     +ER         W    R+++    K G     +KW  LPYD+CTWE  K+
Sbjct: 579  SKDPHYTKMEERFYRYGIKPEWMMVHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEVDKI 638

Query: 698  DEPALEK----YSHLTDLFVQFERQTLKKDAS-------EDELPRGKGDCQQSEIVALTE 746
            D P  E     Y H  +  +  E   + K  S       +D++ R          V   +
Sbjct: 639  DIPYYENFKQLYWHHRERMLGEESSQISKHLSPRDKKLMDDKVERPPETPLVDPTVKFDK 698

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +
Sbjct: 699  QPWYINTTGGTLHSYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHS 758

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN---- 860
            K P LV  PLST+ NW  EF +WAP   VV Y G  ++RA+IR+ E+   D         
Sbjct: 759  KGPYLVSAPLSTIINWEREFEMWAPEFYVVTYTGDKESRAVIRENEFSFEDNAIRGGKKV 818

Query: 861  ---KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSF 917
               KK +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS+  
Sbjct: 819  FRIKKEAQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI 878

Query: 918  QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHM 977
             +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  ++ PHM
Sbjct: 879  DYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDVLGPHM 938

Query: 978  LRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVM 1037
            LRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G +Q S+LNI+M
Sbjct: 939  LRRLKADVFKNMPAKTELIVRVELSQMQKKYYKLILTRNFEALNSKGGG-SQVSLLNIMM 997

Query: 1038 QLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFS 1094
             L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L   GHRVLIFS
Sbjct: 998  DLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDGGHRVLIFS 1057

Query: 1095 QMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGL 1153
            QMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+ GL
Sbjct: 1058 QMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1115

Query: 1154 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKK 1213
            GINLATADTV+IYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AK+K
Sbjct: 1116 GINLATADTVVIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRK 1175

Query: 1214 LMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRD 1266
            +ML  L V     +KSGS  ++E++DIL++GTEELF D                     D
Sbjct: 1176 MMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD---------------------D 1214

Query: 1267 LEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDML 1326
            +E          GD   +K  E S+ I +D+ AI++LLDR+   S  T+L      N+ L
Sbjct: 1215 VE----------GD---NKDVEDSSVIHYDDAAISKLLDRNQDASDDTELQN---MNEYL 1258

Query: 1327 GSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIEENEWDRLLR 1379
             S K  ++   EE   ++ E  +            ++EEN    ++ + W++LLR
Sbjct: 1259 SSFKVAQYVVREEDGVEEVEREII-----------KQEEN----VDPDYWEKLLR 1298



 Score = 81.3 bits (199), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 429 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 471



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 4/61 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLK 127
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP +++ P GKW CP C ++  Q +
Sbjct: 348 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPEMEKAPEGKWSCPHCEKEGIQWE 407

Query: 128 P 128
           P
Sbjct: 408 P 408


>gi|332265298|ref|XP_003281663.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Nomascus
            leucogenys]
          Length = 2435

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 348/862 (40%), Positives = 488/862 (56%), Gaps = 108/862 (12%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP++     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 965  EPSLPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 1023

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 1024 PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLI 1083

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE-- 740
            KW  LPYD+CTWE +D+  +  Y +L   +       L +D         KG+  + +  
Sbjct: 1084 KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDTRLPFRLLKKGNNLRDDKQ 1142

Query: 741  -----------IVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
                        V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGK
Sbjct: 1143 DKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGK 1202

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR
Sbjct: 1203 TVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 1262

Query: 848  QYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            + E+   D    +       KK    KF+VLLT+YE+I  + + L  + W  LVVDE HR
Sbjct: 1263 ENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIEQAILGSIEWACLVVDEAHR 1322

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+
Sbjct: 1323 LKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADI 1382

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
            +   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L
Sbjct: 1383 SKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL 1442

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLH 1077
             + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL LL 
Sbjct: 1443 NSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQ 1501

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN 
Sbjct: 1502 KMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNA 1559

Query: 1138 DKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
              + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR 
Sbjct: 1560 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1619

Query: 1197 VVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGIN 1249
            V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D     
Sbjct: 1620 VTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD----- 1674

Query: 1250 GKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWDENA 1299
              D+    +  +  V  +      +GG L    +          +K  E S+ I +D+ A
Sbjct: 1675 --DVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGDNKDVEDSSVIHYDDAA 1732

Query: 1300 IARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAEN 1357
            I++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +          
Sbjct: 1733 ISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII--------- 1780

Query: 1358 SERKEENAVTGIEENEWDRLLR 1379
              ++EEN    ++ + W++LLR
Sbjct: 1781 --KQEEN----VDPDYWEKLLR 1796



 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 890 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 932



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 4/70 (5%)

Query: 63  RSSTKKKGNDGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPK 118
           RS T     DGY  +    C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP 
Sbjct: 798 RSPTLVDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPH 857

Query: 119 CTQKNDQLKP 128
           C ++  Q +P
Sbjct: 858 CEKEGIQWEP 867


>gi|317418651|emb|CBN80689.1| Chromodomain-helicase-DNA-binding protein 5 [Dicentrarchus labrax]
          Length = 1981

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 349/820 (42%), Positives = 473/820 (57%), Gaps = 93/820 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            EF VKW G S  H SW+ E QL++       NY+ K          YG+           
Sbjct: 493  EFFVKWAGLSYWHCSWVSELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRK 552

Query: 652  ---TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                   + +ER         W    R+++    KDG     +KW  LPYD+CTWE  D 
Sbjct: 553  SKDPQYAVMEERFYRYGIKPEWMVMHRILNHSYDKDGDVHYLIKWRDLPYDQCTWEVDDF 612

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG---KGDCQQSEI----------VALTE 746
               E  SH    +   E Q L +D     + +G   K D Q+ E+          +    
Sbjct: 613  DVPEYDSHKASYWDHRE-QILGEDQRPLVVRKGKRLKEDHQKREVPPDAPIIDPTIKFEH 671

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +
Sbjct: 672  QPWYINATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHS 731

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN---- 860
            K P LV  PLST+ NW  EF +WAP+  VV Y G   +RAIIR+ E+   D    +    
Sbjct: 732  KGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAIIRENEFTFEDSAVKSGRKV 791

Query: 861  ---KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSF 917
               KK +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +  
Sbjct: 792  FRMKKDTPIKFHVLLTSYELITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKI 851

Query: 918  QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHM 977
             +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ PHM
Sbjct: 852  YYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHM 911

Query: 978  LRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVM 1037
            LRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M
Sbjct: 912  LRRLKADVFKNMPAKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGG-NQVSLLNIMM 970

Query: 1038 QLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFS 1094
             L+K CNHPYL P      P   +  +   + +K+S KLTLL  MLK L  EGHRVLIFS
Sbjct: 971  DLKKCCNHPYLFPVAAVEAPVLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFS 1030

Query: 1095 QMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGL 1153
            QMTK+LD+LED+L  EF    YER+DG ++ G RQ AI RFN   + +F FLLSTR+ GL
Sbjct: 1031 QMTKMLDLLEDFL--EFEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1088

Query: 1154 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKK 1213
            GINLA+ADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V R SVEERI Q+AK+K
Sbjct: 1089 GINLASADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRK 1148

Query: 1214 LMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRD 1266
            +ML  L V     +K+G  S++E++DIL++GTEELF D                 EA R 
Sbjct: 1149 MMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDE---------------MEAART 1193

Query: 1267 LEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDML 1326
            + Q  ++     GD   +K  E    I +D++AI++LLDRS   +  T++      N+ L
Sbjct: 1194 MGQNMKRFSTTTGD---NKDGEEGNVIHYDDDAISKLLDRSQDATEDTEIQN---MNEYL 1247

Query: 1327 GSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEEN 1364
             S K  ++   EE  E+     +   + A  +   RK+ N
Sbjct: 1248 SSFKVAQYVVKEEDGEEPEPHNLVPFNGAGIKQLCRKDHN 1287



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 26/42 (61%), Positives = 33/42 (78%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+C
Sbjct: 402 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 443



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  Q
Sbjct: 320 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQ 377


>gi|355557485|gb|EHH14265.1| hypothetical protein EGK_00158 [Macaca mulatta]
          Length = 2247

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 350/877 (39%), Positives = 488/877 (55%), Gaps = 123/877 (14%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP++     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 597  EPSLPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 655

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 656  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLI 715

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA-------------SEDEL 729
            KW  LPYD+CTWE +D+  +  Y +L   +       L +D               +D+ 
Sbjct: 716  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQ 774

Query: 730  PRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
             +          V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGK
Sbjct: 775  EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGK 834

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR
Sbjct: 835  TVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 894

Query: 848  QYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            + E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE HR
Sbjct: 895  ENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHR 954

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+
Sbjct: 955  LKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADI 1014

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
            +   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L
Sbjct: 1015 SKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL 1074

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIP-----GTEPDSGSV-------------EFL 1062
             + G G  Q S+LNI+M L+K CNHPYL P     G     GS               + 
Sbjct: 1075 NSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVVGFPGHHGSFSMAAVEAPVLPNGSYD 1133

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
                +K+S KL LL  MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG 
Sbjct: 1134 GSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGG 1191

Query: 1123 VSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            ++ G RQ AI RFN   + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +R
Sbjct: 1192 ITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1251

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDIL 1234
            AHRIGQ+K++++YR V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL
Sbjct: 1252 AHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDIL 1311

Query: 1235 RWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------D 1284
            ++GTEELF D       D+    +  +  V  +      +GG L    +          +
Sbjct: 1312 KFGTEELFKD-------DVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGDN 1364

Query: 1285 KCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQ 1342
            K  E S+ I +D+ AI++LLDR+   +  T+L      N+ L S K  ++   EE   ++
Sbjct: 1365 KDVEDSSVIHYDDAAISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEE 1421

Query: 1343 AESPVAAVDDASAENSERKEENAVTGIEENEWDRLLR 1379
             E  +            ++EEN    ++ + W++LLR
Sbjct: 1422 VEREII-----------KQEEN----VDPDYWEKLLR 1443



 Score = 81.3 bits (199), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 522 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 564



 Score = 75.1 bits (183), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 436 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 495

Query: 125 QLKP 128
           Q +P
Sbjct: 496 QWEP 499


>gi|327288760|ref|XP_003229093.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Anolis
            carolinensis]
          Length = 2059

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 337/793 (42%), Positives = 454/793 (57%), Gaps = 106/793 (13%)

Query: 605  VKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVI 654
            +KG++   EF VKW G S  H SWI E QL++       NY+ K          YG+   
Sbjct: 600  MKGRS-EREFFVKWCGLSYWHCSWIKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGDD 658

Query: 655  NICDER-----------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDE 691
            +   E+                       W    R+I+    K G     VKW  L YD+
Sbjct: 659  DGKSEKRKIKDPLYAEMEEKYYRYGIKPDWMTVHRIINHSIDKKGNYHYLVKWRDLSYDQ 718

Query: 692  CTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASE--------DELPR--GKGDCQQSEI 741
             TWE+ DE  + +Y +L   +       + +D ++         ELP             
Sbjct: 719  STWEE-DEMPIPEYEYLKQAYWFHRELIMGEDPAQPRKYKKKKKELPSEDPPNSPTNDPT 777

Query: 742  VALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLY 799
            V    QP  +   GG L  +QLE LNWLR  W +S + ILADEMGLGKT+    F+ SLY
Sbjct: 778  VKYDSQPRFITSTGGTLHMYQLEGLNWLRFSWAQSTDTILADEMGLGKTIQTIVFLYSLY 837

Query: 800  CEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL 859
             E   K P LV  PLST+ NW  EF +WAPN  VV Y G   +R+IIR++E+   D    
Sbjct: 838  REGHTKGPFLVSAPLSTIINWEREFQMWAPNFYVVTYTGDKDSRSIIREHEFSFEDNAMK 897

Query: 860  N-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLL 912
                    K+ +  KF+VLLT+YE++  D + L  + W  LVVDE HRLKN+ SK F +L
Sbjct: 898  GGKKAFKMKREAQVKFHVLLTSYELVTIDQAALASIRWACLVVDEAHRLKNNQSKFFRVL 957

Query: 913  NSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKL 972
            N +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L
Sbjct: 958  NGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDL 1017

Query: 973  VAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSM 1032
            + PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+
Sbjct: 1018 LGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSL 1076

Query: 1033 LNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHR 1089
            LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL  ML+ L ++GHR
Sbjct: 1077 LNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHR 1136

Query: 1090 VLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLST 1148
            VLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLST
Sbjct: 1137 VLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLST 1194

Query: 1149 RSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQ 1208
            R+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q
Sbjct: 1195 RAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQ 1254

Query: 1209 LAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIE 1261
            +AK+K+ML  L V     +KSG  S++E++DIL++GTEELF D      ++ GEN     
Sbjct: 1255 VAKRKMMLTHLVVRPGLGSKSGSMSKQELDDILKFGTEELFKD------ENEGENK---- 1304

Query: 1262 EAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDL 1321
                                      E S+ I +D  AIARLLDR+     +TD A+   
Sbjct: 1305 -------------------------DEDSSVIHYDNEAIARLLDRNQ---DATDDADVQN 1336

Query: 1322 ENDMLGSVKATEW 1334
             N+ L S K  ++
Sbjct: 1337 MNEYLSSFKVAQY 1349



 Score = 77.0 bits (188), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 517 CRVCKDGGELLCCDACISSYHIHCLNPPLPEIPNGEWLCPRCT 559



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CDSCPR YHL CLDP L + P GKW CP C ++  Q
Sbjct: 431 DGYETDHQDYCEVCQQGGEIILCDSCPRAYHLVCLDPELDKAPEGKWSCPHCEKEGVQ 488


>gi|18400745|ref|NP_565587.1| CHD3-type chromatin-remodeling factor PICKLE [Arabidopsis thaliana]
 gi|75193642|sp|Q9S775.1|PKL_ARATH RecName: Full=CHD3-type chromatin-remodeling factor PICKLE; AltName:
            Full=Protein GYMNOS
 gi|6318930|gb|AAF07084.1|AF185578_1 GYMNOS/PICKLE [Arabidopsis thaliana]
 gi|6478518|gb|AAF13875.1|AF185577_1 chromatin remodeling factor CHD3 [Arabidopsis thaliana]
 gi|330252572|gb|AEC07666.1| CHD3-type chromatin-remodeling factor PICKLE [Arabidopsis thaliana]
          Length = 1384

 Score =  561 bits (1445), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 303/672 (45%), Positives = 426/672 (63%), Gaps = 53/672 (7%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK-------------RKLENYKAKYGTTVINICDE 659
            ++LVKW G S +H SW+PE + +   K             R++E++       V      
Sbjct: 130  QYLVKWKGLSYLHCSWVPEKEFQKAYKSNHRLKTRVNNFHRQMESFNNSEDDFVA--IRP 187

Query: 660  RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             W    R+++ R  +DG  E  VK+  L YDEC WE   E  +  + +    F     +T
Sbjct: 188  EWTTVDRILACRE-EDGELEYLVKYKELSYDECYWES--ESDISTFQNEIQRFKDVNSRT 244

Query: 720  LK-KDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             + KD      PR   D QQ         PE LKG  L P+QLE LN+LR  W K  +VI
Sbjct: 245  RRSKDVDHKRNPR---DFQQ-----FDHTPEFLKG-LLHPYQLEGLNFLRFSWSKQTHVI 295

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ + A ++SL+ E    +P LV+ PLST+ NW  EFA WAP +NVV Y G
Sbjct: 296  LADEMGLGKTIQSIALLASLFEE--NLIPHLVIAPLSTLRNWEREFATWAPQMNVVMYFG 353

Query: 839  CAKARAIIRQYEWHASDPDNL-----------NKKTSSYKFNVLLTTYEMILADSSHLRG 887
             A+ARA+IR++E++ S                  K    KF+VLLT+YEMI  DS+ L+ 
Sbjct: 354  TAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSAVLKP 413

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + WE ++VDEGHRLKN  SKLFS L  +S  HR+LLTGTPLQNN+ E++ L++FL    F
Sbjct: 414  IKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKF 473

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
             SL  F+E+F D+   +++  L K++APH+LRR+KKD M+++PPK E ++ V+LSS+Q E
Sbjct: 474  GSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKE 533

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRI 1067
            YY+A+ T+NYQ+L    KG AQ S+ NI+M+LRKVC HPY++ G EP         +  +
Sbjct: 534  YYKAIFTRNYQVLTK--KGGAQISLNNIMMELRKVCCHPYMLEGVEPVIHDANEAFKQLL 591

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            ++  KL LL  M+  L ++GHRVLI++Q   +LD+LEDY         YER+DG V   +
Sbjct: 592  ESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCT--HKKWQYERIDGKVGGAE 649

Query: 1128 RQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQ  I RFN ++ ++F FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM RAHR+G
Sbjct: 650  RQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 709

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----SGSQKEVEDILRWGTEELF 1242
            Q+ ++++YRL+ R ++EER++QL KKK++L+ L V K    + +Q+E++DI+R+G++ELF
Sbjct: 710  QTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQNINQEELDDIIRYGSKELF 769

Query: 1243 ---NDSPGINGK 1251
               +D  G +GK
Sbjct: 770  ASEDDEAGKSGK 781



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSI 135
           C  C    NL+ C++C   +H +CL PPLK      W+CP+C      + P++ +D I
Sbjct: 52  CQACGESTNLVSCNTCTYAFHAKCLVPPLKDASVENWRCPEC------VSPLNEIDKI 103


>gi|168017421|ref|XP_001761246.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
 gi|162687586|gb|EDQ73968.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
          Length = 598

 Score =  560 bits (1444), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 286/518 (55%), Positives = 369/518 (71%), Gaps = 16/518 (3%)

Query: 602  SAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDERW 661
            +A+ +G++   EFLVKW G+S+IHN W+ E +L+++AKRKLE +  K G     I DE+ 
Sbjct: 88   TAEQRGQSSRVEFLVKWRGRSHIHNEWVSEKRLQIIAKRKLERFTTKNGRAPQIILDEQC 147

Query: 662  KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLK 721
             +PQRV++ +S K+G  E  VKW  +PYDECTWEK   P + +   L  ++  FE   + 
Sbjct: 148  LKPQRVLARKSGKNGCSEVLVKWHSVPYDECTWEKEKHPVIAEKIELLKVYEHFEAAAVA 207

Query: 722  KDASEDELPRGKGDCQQSEIVALTEQPEELK-GGALFPHQLEALNWLRKCWHKSKNVILA 780
            K  +         D + SEI  LTEQPE  K GG L+PHQLE LNWLRK W++ KNVIL 
Sbjct: 208  KKTNVV-----ANDSRPSEIKELTEQPEWFKKGGVLYPHQLEGLNWLRKSWYQRKNVILT 262

Query: 781  DEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCA 840
            DEMGLG+T SACAF+SSL+ EF    PCLVLV LSTMPNWLAEF++WAP LNV+EYHG A
Sbjct: 263  DEMGLGRTRSACAFLSSLHREFHVNGPCLVLVSLSTMPNWLAEFSIWAPFLNVIEYHGSA 322

Query: 841  KARAIIRQYEWHA-----SDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            +ARA+IR+YEW+A     S  +  +    ++KFNV+LT YE+++ADSS LR VPWEVL+V
Sbjct: 323  EARAVIREYEWYATHTGKSGDEGKHPDFQAFKFNVMLTPYEIMIADSSQLRSVPWEVLIV 382

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE   LK   SKL S LN+F   HR+LL GTPLQN++ E+++LLNFLQ     +  SFE+
Sbjct: 383  DEVSILKKFESKL-STLNTFKIGHRILLRGTPLQNDLDELFSLLNFLQSEISLTRGSFEQ 441

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
            KF  L+T+++V++LKKLV PHM   L ++ MQ+  P+ ER+V VE++  QAEYYR +LTK
Sbjct: 442  KFGHLSTSEQVDKLKKLVVPHMC-ELNENDMQDKLPQAERVVAVEMTPAQAEYYRTLLTK 500

Query: 1016 NYQILRNIGKGVA---QQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAK 1072
            NY++LR  G G      Q++LNI+MQL+KVCNHPYL+   EP +G  + LHEMRIK SAK
Sbjct: 501  NYRLLRQAGGGRPSDQNQTLLNIMMQLQKVCNHPYLLSEMEPKAGDAKLLHEMRIKTSAK 560

Query: 1073 LTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIE 1110
            LTLLHSML  L K GHRVLIFSQ+TKLLDILEDYL+ E
Sbjct: 561  LTLLHSMLHHLKKGGHRVLIFSQVTKLLDILEDYLSFE 598



 Score = 89.4 bits (220), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 39/52 (75%)

Query: 74  YYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           YYY+C +C +GG LLCCD CPR YHL+CL PPLKR P GKW CP C  ++ +
Sbjct: 23  YYYDCEVCGIGGELLCCDLCPRAYHLECLMPPLKRTPPGKWVCPTCRDRSGK 74


>gi|351713762|gb|EHB16681.1| Chromodomain-helicase-DNA-binding protein 5 [Heterocephalus glaber]
          Length = 2263

 Score =  560 bits (1444), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 351/865 (40%), Positives = 484/865 (55%), Gaps = 116/865 (13%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP V     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 720  EPGVPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 778

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 779  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFDKKGDVHYLI 838

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIV 742
            KW  LPYD+CTWE +D+  +  Y +L   +       L +D     LP+      +    
Sbjct: 839  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDT---RLPKRLIKKGKKLKD 894

Query: 743  ALTEQPEELK------------------GGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
               E+P +                    GG L P+QLE LNWLR  W +  + ILADEMG
Sbjct: 895  DKQEKPPDTPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG 954

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKTV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R+
Sbjct: 955  LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 1014

Query: 845  IIRQYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            +IR+ E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE
Sbjct: 1015 VIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDE 1074

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P    +L  F E+F
Sbjct: 1075 AHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPEX--NLEGFLEEF 1132

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             D++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N+
Sbjct: 1133 ADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 1192

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE---PDSGSVEFLHEMRIKASAKLT 1074
            + L + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL 
Sbjct: 1193 EALNSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLM 1251

Query: 1075 LLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITR 1134
            LL  MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI R
Sbjct: 1252 LLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDR 1309

Query: 1135 FNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            FN   ++ F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++
Sbjct: 1310 FNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMI 1369

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDS- 1245
            YR V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D  
Sbjct: 1370 YRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDV 1429

Query: 1246 ---------PGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWD 1296
                     P     D+  +      A   L++KH     G      +K  E S+ I +D
Sbjct: 1430 EGMMSQGQRPATPIPDVQSSKGGTLAA--GLKKKHGSTPPG-----DNKDVEDSSVIHYD 1482

Query: 1297 ENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDAS 1354
            + AI++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  V       
Sbjct: 1483 DAAISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREVI------ 1533

Query: 1355 AENSERKEENAVTGIEENEWDRLLR 1379
                 ++EEN    ++ + W++LLR
Sbjct: 1534 -----KQEEN----VDPDYWEKLLR 1549



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 6/56 (10%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C 
Sbjct: 401 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCV 456


>gi|281346162|gb|EFB21746.1| hypothetical protein PANDA_013140 [Ailuropoda melanoleuca]
          Length = 1814

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 348/865 (40%), Positives = 484/865 (55%), Gaps = 117/865 (13%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP V     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 364  EPGVPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 422

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 423  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLI 482

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIV 742
            KW  LPYD+CTWE +D+  +  Y +L   +       L +DA    LP+      +    
Sbjct: 483  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDA---RLPKRLVKKGKKLKD 538

Query: 743  ALTEQPEELK------------------GGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
               E+P +                    GG L P+QLE LNWLR  W +  + ILADEMG
Sbjct: 539  DKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG 598

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKTV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R+
Sbjct: 599  LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 658

Query: 845  IIRQYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            +IR+ E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE
Sbjct: 659  VIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDE 718

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN+  K+   LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F
Sbjct: 719  AHRLKNNQPKV---LNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF 775

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             D++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N+
Sbjct: 776  ADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNF 835

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLT 1074
            + L + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL 
Sbjct: 836  EALNSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLM 894

Query: 1075 LLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITR 1134
            LL  MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI R
Sbjct: 895  LLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDR 952

Query: 1135 FNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            FN   + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++
Sbjct: 953  FNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMI 1012

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSP 1246
            YR V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D  
Sbjct: 1013 YRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD-- 1070

Query: 1247 GINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ----------DKCTEGSTKIVWD 1296
                 D+    +  +  V  +      +GG L    +          +K  E S+ I +D
Sbjct: 1071 -----DVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYD 1125

Query: 1297 ENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDAS 1354
            + AI++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +       
Sbjct: 1126 DAAISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII------ 1176

Query: 1355 AENSERKEENAVTGIEENEWDRLLR 1379
                 ++EEN    ++ + W++LLR
Sbjct: 1177 -----KQEEN----VDPDYWEKLLR 1192



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 204 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 263

Query: 125 QLKP 128
           Q +P
Sbjct: 264 QWEP 267



 Score = 54.3 bits (129), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDP-PLKRIPNGKWQCPKC 119
           C +C  GG LLCCD+CP +YHL C  P P   +  G   CP+C
Sbjct: 290 CRVCKDGGELLCCDACPSSYHLHCXTPTPSPALNLGTLLCPQC 332


>gi|302803789|ref|XP_002983647.1| hypothetical protein SELMODRAFT_155996 [Selaginella moellendorffii]
 gi|300148484|gb|EFJ15143.1| hypothetical protein SELMODRAFT_155996 [Selaginella moellendorffii]
          Length = 1296

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 315/753 (41%), Positives = 454/753 (60%), Gaps = 94/753 (12%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK-----RKLENYKAKYGTTVINICDE-------RW 661
            +LVKW  +S +H SWIP ++++  ++     R   N+  K    +  + DE        W
Sbjct: 131  YLVKWKSRSYLHCSWIPLNEMERASRMYPGLRMKMNHFHKTCEAMKELADEDQGPIRVEW 190

Query: 662  KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLK 721
                RVI  R +++ T+E  VKW  L YDE TWE  ++ A            QF+ Q   
Sbjct: 191  ITVDRVIDERETEN-TKEYLVKWKELGYDEATWEVKEDIA------------QFQSQI-- 235

Query: 722  KDASEDELPRGKGDCQ------QSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSK 775
             D  E    RG    +      Q         P+ L  G L P+QLE LN+LR  W + K
Sbjct: 236  -DYYEKIAKRGPRKTKRTAARHQKTFTQFETTPDFLSDGVLHPYQLEGLNFLRFAWQQEK 294

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            +VILADEMGLGKT+   AF++SL  E +   P LV+ PLST+ NW  EFA WAP++++V 
Sbjct: 295  HVILADEMGLGKTIQTIAFLASLKQE-EVTDPHLVVAPLSTLRNWEREFATWAPDIHIVV 353

Query: 836  YHGCAKARAIIRQYEWH---------ASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLR 886
            Y G AKAR++IR++E+              +  + K    KF+VLLT+YEMI  D++ L+
Sbjct: 354  YAGNAKARSVIREFEFFYPKTDKTKKKYYSERKHSKQDRIKFDVLLTSYEMITFDAAILK 413

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
             + WE L+VDEGHRLK+  SKLF  L +++  HRVLLTGTPLQNN+ E++ L++FL  + 
Sbjct: 414  SIKWECLIVDEGHRLKSKESKLFQTLQNYTTYHRVLLTGTPLQNNLDELFTLMHFLDASK 473

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQA 1006
            F SL  F+++F D+   ++V  L K++A H+LRR+KKD ++ +PPK E M+ VELSS+Q 
Sbjct: 474  FSSLEEFQQEFRDINQEEQVSRLHKMLASHLLRRVKKDVLKQLPPKKELMLRVELSSVQK 533

Query: 1007 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMR 1066
            E Y+ +LT+NY+ L    +G  Q S+ N+VM+LRK+C HPY++   EPDS + E  +  R
Sbjct: 534  ELYKEILTRNYEALSK--RGGPQVSLNNVVMELRKLCGHPYMV--IEPDSKNEEEENRHR 589

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVG 1126
            I++S KL+LL  M+  L   GHRVL++SQ   +LDILEDYL       +YER+DG+V+  
Sbjct: 590  IESSGKLSLLDKMMVKLKASGHRVLLYSQFQHMLDILEDYLT--HKNWSYERIDGNVTGA 647

Query: 1127 DRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1185
            +RQ  I RFN   S RF FLLSTR+ GLGINLATADTV+IYDSD+NPHAD+QAM RAHR+
Sbjct: 648  ERQIRIDRFNAPNSNRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARAHRL 707

Query: 1186 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS----QKEVEDILRWGTEEL 1241
            GQ   +++YRLV R S+EER++Q+ KKK++L+ L V +  +    Q+E++DILR+G + +
Sbjct: 708  GQKNMVMIYRLVTRGSIEERMMQMTKKKMVLEHLVVGRMKTQVLNQEELDDILRYGAKSV 767

Query: 1242 FNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIA 1301
            F D    +GK                                      S +I +D++AI 
Sbjct: 768  FGDENDDSGK--------------------------------------SWQIHYDDSAID 789

Query: 1302 RLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW 1334
            RLLDRS++++G  +++  + +ND+L + K   +
Sbjct: 790  RLLDRSDVETGH-EMSTDEDDNDLLKAFKVANF 821



 Score = 83.2 bits (204), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 6/58 (10%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSI 135
           C IC  GG +LCCD+C   YHLQCLDPP+K +P G W+CPKC +      P+++++ I
Sbjct: 50  CTICKSGGKVLCCDACTAVYHLQCLDPPMKSVPKGSWRCPKCEE------PLADIEKI 101


>gi|302817780|ref|XP_002990565.1| hypothetical protein SELMODRAFT_185367 [Selaginella moellendorffii]
 gi|300141733|gb|EFJ08442.1| hypothetical protein SELMODRAFT_185367 [Selaginella moellendorffii]
          Length = 1296

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 315/753 (41%), Positives = 454/753 (60%), Gaps = 94/753 (12%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK-----RKLENYKAKYGTTVINICDE-------RW 661
            +LVKW  +S +H SWIP ++++  ++     R   N+  K    +  + DE        W
Sbjct: 131  YLVKWKSRSYLHCSWIPLNEMERASRMYPGLRMKMNHFHKTCEAMKELADEDQGPIRVEW 190

Query: 662  KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLK 721
                RVI  R +++ T+E  VKW  L YDE TWE  ++ A            QF+ Q   
Sbjct: 191  ITVDRVIDERETEN-TKEYLVKWKELGYDEATWEVKEDIA------------QFQSQI-- 235

Query: 722  KDASEDELPRGKGDCQ------QSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSK 775
             D  E    RG    +      Q         P+ L  G L P+QLE LN+LR  W + K
Sbjct: 236  -DYYEKIAKRGPRKTKRTAARHQKTFTQFETTPDFLSDGVLHPYQLEGLNFLRFAWQQEK 294

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            +VILADEMGLGKT+   AF++SL  E +   P LV+ PLST+ NW  EFA WAP++++V 
Sbjct: 295  HVILADEMGLGKTIQTIAFLASLKQE-EVTDPHLVVAPLSTLRNWEREFATWAPDIHIVV 353

Query: 836  YHGCAKARAIIRQYEWH---------ASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLR 886
            Y G AKAR++IR++E+              +  + K    KF+VLLT+YEMI  D++ L+
Sbjct: 354  YAGNAKARSVIREFEFFYPKTDKTKKKYYSERKHSKQDRIKFDVLLTSYEMITFDAAILK 413

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
             + WE L+VDEGHRLK+  SKLF  L +++  HRVLLTGTPLQNN+ E++ L++FL  + 
Sbjct: 414  SIKWECLIVDEGHRLKSKESKLFQTLQNYTTYHRVLLTGTPLQNNLDELFTLMHFLDASK 473

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQA 1006
            F SL  F+++F D+   ++V  L K++A H+LRR+KKD ++ +PPK E M+ VELSS+Q 
Sbjct: 474  FSSLEEFQQEFRDINQEEQVSRLHKMLASHLLRRVKKDVLKQLPPKKELMLRVELSSVQK 533

Query: 1007 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMR 1066
            E Y+ +LT+NY+ L    +G  Q S+ N+VM+LRK+C HPY++   EPDS + E  +  R
Sbjct: 534  ELYKEILTRNYEALSK--RGGPQVSLNNVVMELRKLCGHPYMV--IEPDSKNEEEENRHR 589

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVG 1126
            I++S KL+LL  M+  L   GHRVL++SQ   +LDILEDYL       +YER+DG+V+  
Sbjct: 590  IESSGKLSLLDKMMVKLKASGHRVLLYSQFQHMLDILEDYLT--HKNWSYERIDGNVTGA 647

Query: 1127 DRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1185
            +RQ  I RFN   S RF FLLSTR+ GLGINLATADTV+IYDSD+NPHAD+QAM RAHR+
Sbjct: 648  ERQIRIDRFNAPNSNRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARAHRL 707

Query: 1186 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS----QKEVEDILRWGTEEL 1241
            GQ   +++YRLV R S+EER++Q+ KKK++L+ L V +  +    Q+E++DILR+G + +
Sbjct: 708  GQKNMVMIYRLVTRGSIEERMMQMTKKKMVLEHLVVGRMKTQVLNQEELDDILRYGAKSV 767

Query: 1242 FNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIA 1301
            F D    +GK                                      S +I +D++AI 
Sbjct: 768  FGDENDDSGK--------------------------------------SWQIHYDDSAID 789

Query: 1302 RLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW 1334
            RLLDRS++++G  +++  + +ND+L + K   +
Sbjct: 790  RLLDRSDVETGH-EMSTDEDDNDLLKAFKVANF 821



 Score = 83.2 bits (204), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 6/58 (10%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSI 135
           C IC  GG +LCCD+C   YHLQCLDPP+K +P G W+CPKC +      P+++++ I
Sbjct: 50  CTICKSGGKVLCCDACTAVYHLQCLDPPMKSVPKGSWRCPKCEE------PLADIEKI 101


>gi|168012021|ref|XP_001758701.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
 gi|162690311|gb|EDQ76679.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
          Length = 1220

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 308/668 (46%), Positives = 431/668 (64%), Gaps = 49/668 (7%)

Query: 613  EFLVKWVGKSNIHNSWIP----ESQLKVLA--KRKLENY-KAKYGTTVINICDE------ 659
            ++LVKW  +S +H SW+     E  +K  A  + KL ++ K   GT   N  DE      
Sbjct: 140  QYLVKWKSRSYLHCSWVTAEDLERGMKNFAGLRMKLNHFHKMLDGTRNWNTPDEDRMPIR 199

Query: 660  -RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
              W    RV+ +R + D T E  VKW  L YDE TWE ++E  L   + +        RQ
Sbjct: 200  PEWTTVDRVLDMRHNGDIT-EYLVKWKELGYDEATWE-VEEDVLAFQAEIDKFKEIMSRQ 257

Query: 719  TLKKDASE----DELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKS 774
             LKK         +L R + D +        + P+ L GG+L P+QLE LN+LR  W ++
Sbjct: 258  VLKKRKGSALDSKDLKRRRKDFK-----PFKKTPKFLIGGSLHPYQLEGLNFLRFAWEQN 312

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
            K+VILADEMGLGKT+ + + + SL  E    LP LV+ PLST+ NW  EFA W P +NVV
Sbjct: 313  KHVILADEMGLGKTIQSISLLGSL-VEENVGLPHLVVAPLSTLRNWEREFATWCPQMNVV 371

Query: 835  EYHGCAKARAIIRQYEWHASDPDNL------------NKKTSSYKFNVLLTTYEMILADS 882
             Y G ++ARAI+RQYE+      +               K    KF+VLLT+YEMI  D+
Sbjct: 372  MYVGSSQARAILRQYEFFFPQKSSKKSKDKGKKKMAGESKQDRVKFDVLLTSYEMINLDT 431

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L+ + WE L+VDEGHRLKN  SKLF  L +FS +HRVLLTGTPLQNN+ E++ L++FL
Sbjct: 432  AILKALKWECLIVDEGHRLKNKDSKLFQTLTTFSTRHRVLLTGTPLQNNLDELFMLMHFL 491

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
                F SL  F+++F D+   ++V  L K++APH+LRR+KKD ++ +PPK E ++ VELS
Sbjct: 492  DAGKFNSLEEFQQEFQDINQEEQVGRLHKMLAPHLLRRVKKDVLKEMPPKKELILRVELS 551

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL 1062
            S+Q E+Y+A+LTKNYQIL    +G  Q S+ N+VM+LRK+C HPYL+ G EP   +    
Sbjct: 552  SLQKEFYKAILTKNYQILAK--QGGPQVSLTNVVMELRKLCGHPYLLEGVEPTVRNQAEA 609

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI-EFGPKTYERVDG 1121
            +   ++ S KL LL  M+  L+ +GHRVLI+SQ T++LDILED+L++ ++G   YER+DG
Sbjct: 610  NRQLLENSGKLLLLDKMMTKLHAQGHRVLIYSQFTRMLDILEDWLHLKKWG---YERIDG 666

Query: 1122 SVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             +S  +RQ  I R+N   S +F FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM 
Sbjct: 667  KISGSERQIRIDRYNAPNSTKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMA 726

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG----SQKEVEDILRW 1236
            RAHR+GQ  +++++RLV R ++EER++Q+ KKK++L+ L V +      +Q+E++DILR+
Sbjct: 727  RAHRLGQQNKVMIFRLVTRGTIEERMMQMTKKKMVLEHLVVGRMKKENINQEELDDILRY 786

Query: 1237 GTEELFND 1244
            G  ELF++
Sbjct: 787  GAMELFSE 794



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDS-IS 136
           C IC LGG+LLCCD+C   +HL CLDPP+K +P GKW CPKC      + P+ +++  I 
Sbjct: 56  CSICHLGGDLLCCDTCTAVFHLGCLDPPMKVVPRGKWSCPKC------VNPLGDVEKFID 109

Query: 137 KRARSKIITIKSQSGVKSSGADKVSQIFGNSILARKRS 174
            + R   +  K    V+  G++   Q      L + +S
Sbjct: 110 TQMRPMKVPGKLPVNVEDKGSEDQPQKLVKQYLVKWKS 147


>gi|410979901|ref|XP_003996319.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 3 [Felis catus]
          Length = 2100

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 339/790 (42%), Positives = 453/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 643  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 702

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G+    VKW  LPYD+ TWE+ DE
Sbjct: 703  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGSYHYLVKWRDLPYDQSTWEE-DE 761

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
             ++ +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 762  MSIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPSSPTNDPTVKYET 818

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 819  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 878

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 879  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 936

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 937  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 996

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 997  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 1056

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 1057 HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 1115

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IKAS KL LL  ML+ L ++GHRVLI
Sbjct: 1116 MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLI 1175

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1176 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1233

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1234 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1293

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1294 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1340

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1341 ----------------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNE 1375

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1376 YLSSFKVAQY 1385



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 547 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 595



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 466 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 523


>gi|156717248|ref|NP_001096166.1| chromodomain helicase DNA binding protein 4 [Xenopus (Silurana)
            tropicalis]
 gi|126631946|gb|AAI33720.1| chd4 protein [Xenopus (Silurana) tropicalis]
          Length = 1888

 Score =  558 bits (1437), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 335/787 (42%), Positives = 450/787 (57%), Gaps = 109/787 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVINICDER-- 660
            EF VKW   S +H SW+ E QL++  +    NY+ K          YG        +R  
Sbjct: 531  EFFVKWQAMSYLHCSWVTELQLELHCQVMFRNYQRKNDMDEPPAGDYGGDDEEKSRKRKN 590

Query: 661  --------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEP 700
                                W    RV++    K G     +KW  LPYD+ +WE  +E 
Sbjct: 591  KDPKYLEMEEKFYRYGIKPEWMMIHRVLNHSVDKKGFVHYLIKWRDLPYDQASWES-EES 649

Query: 701  ALEKYSHLTDLFVQF---ERQTLKKDASE----------DELPRGKGDCQQSEIVALTEQ 747
             ++ Y    D++ Q     R+ +  D              ++ R          V    Q
Sbjct: 650  DIQDY----DIYRQAYWNHRELMCGDEGRPGKKTKKVKLRKVERPPDTPAVDPTVKYDRQ 705

Query: 748  PEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAK 805
            PE L   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K
Sbjct: 706  PEYLDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSK 765

Query: 806  LPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDN 858
             P LV  PLST+ NW  EF +WAP++ VV Y G   +RA+IR+ E+   D         +
Sbjct: 766  GPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEDNAIRGGKKAS 825

Query: 859  LNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQ 918
              KK +S KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +S Q
Sbjct: 826  RMKKEASVKFHVLLTSYELITIDMAVLGSIDWACLVVDEAHRLKNNQSKFFRVLNGYSLQ 885

Query: 919  HRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHML 978
            H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHML
Sbjct: 886  HKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQIKKLHDMLGPHML 945

Query: 979  RRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQ 1038
            RRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM 
Sbjct: 946  RRLKADVFKNMPSKTELIVRVELSPMQKKYYKFILTRNFEALNARGGG-NQVSLLNVVMD 1004

Query: 1039 LRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQ 1095
            L+K CNHPYL P      P   +  +     IK + KL LL  ML+ L  +GHRVLIFSQ
Sbjct: 1005 LKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIKGAGKLLLLQKMLRKLKDDGHRVLIFSQ 1064

Query: 1096 MTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLG 1154
            MTK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLG
Sbjct: 1065 MTKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1122

Query: 1155 INLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKL 1214
            INLATADTV+IYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+
Sbjct: 1123 INLATADTVVIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKM 1182

Query: 1215 MLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDL 1267
            ML  L V     +K+G  S++E++DIL++GTEELF D                 EA    
Sbjct: 1183 MLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKD-----------------EATE-- 1223

Query: 1268 EQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLG 1327
                           ++K  +  + I +D+ AIARLLDR+  Q  + DL E    N+ L 
Sbjct: 1224 ---------------ENKEGDDISVIHYDDKAIARLLDRN--QDETEDLVELQGMNEYLS 1266

Query: 1328 SVKATEW 1334
            S K  ++
Sbjct: 1267 SFKVAQY 1273



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 441 CRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLCPRCT 483



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP + + P GKW CP C ++  Q
Sbjct: 353 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMDKAPEGKWSCPHCEKEGVQ 410


>gi|168051599|ref|XP_001778241.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
 gi|162670338|gb|EDQ56908.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
          Length = 1245

 Score =  557 bits (1436), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 314/696 (45%), Positives = 442/696 (63%), Gaps = 53/696 (7%)

Query: 585  KTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIP----ESQLKVLA-- 638
            K  G +A   +E  V+E    K   +  ++LVKW  +S +H SW+     E  +K  A  
Sbjct: 116  KVPGRIAHNAEE-KVSEDQPPK---LVKQYLVKWKSRSYLHCSWVTAEDLERGMKTFAGL 171

Query: 639  KRKLENY-KAKYGTTVINICDE-------RWKQPQRVISLRSSKDGTREAFVKWTGLPYD 690
            + KL ++ K   G+   N  DE        W    RV+ +R + D T E  VKW  L YD
Sbjct: 172  RMKLNHFHKMLDGSKNWNTPDEDRMPIRPEWTTVDRVLDMRHNGDIT-EYLVKWKELGYD 230

Query: 691  ECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASE----DELPRGKGDCQQSEIVALTE 746
            E TWE ++E  L   + +        RQ LKK         +L R + D +        +
Sbjct: 231  EATWE-VEEDVLAFQAEVDKFKEIMSRQALKKRKGSALDNKDLKRRRKDFK-----PFKK 284

Query: 747  QPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
             P+ L GG+L P+QLE LN+LR  W ++K+VILADEMGLGKT+ + + + SL  E    L
Sbjct: 285  TPKFLVGGSLHPYQLEGLNFLRFAWEQNKHVILADEMGLGKTIQSISLLGSL-IEENVGL 343

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL------- 859
            P LV+ PLST+ NW  EFA W P +NVV Y G ++ARAI+RQYE+      +        
Sbjct: 344  PHLVVAPLSTLRNWEREFATWCPQMNVVMYVGSSQARAILRQYEFFFPQKSSKKSKDKGK 403

Query: 860  -----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNS 914
                   K    KF+VLLT+YEMI  D++ L+ + WE L+VDEGHRLKN  SKLF  L +
Sbjct: 404  KKMAGESKQDRVKFDVLLTSYEMINLDTTILKALKWECLIVDEGHRLKNKDSKLFQTLTT 463

Query: 915  FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVA 974
            FS +HRVLLTGTPLQNN+ E++ L++FL    F SL  F+++F D+   ++V  L K++A
Sbjct: 464  FSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFNSLEEFQQEFQDINQEEQVGRLHKMLA 523

Query: 975  PHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLN 1034
            PH+LRR+KKD ++ +PPK E ++ VELSS+Q E+Y+A+LTKNYQIL    +G  Q S+ N
Sbjct: 524  PHLLRRVKKDVLKEMPPKKELILRVELSSLQKEFYKAILTKNYQILAK--QGGPQVSLTN 581

Query: 1035 IVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFS 1094
            +VM+LRK+C HPYL+ G EP   +    +   ++ S KL LL  M+  L+ +GHRVLI+S
Sbjct: 582  VVMELRKLCGHPYLLEGVEPTVRNQAEANRQLLENSGKLLLLDKMMTKLHSQGHRVLIYS 641

Query: 1095 QMTKLLDILEDYLNI-EFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCG 1152
            Q T++LDILED+L++ ++G   YER+DG +S  +RQ  I R+N   S +F FLLSTR+ G
Sbjct: 642  QFTRMLDILEDWLHLKKWG---YERIDGKISGSERQIRIDRYNSPNSTKFCFLLSTRAGG 698

Query: 1153 LGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKK 1212
            LGINLATADTVIIYDSD+NPHAD+QAM RAHR+GQ  +++++RLV R ++EER++Q+ KK
Sbjct: 699  LGINLATADTVIIYDSDWNPHADLQAMARAHRLGQQNKVMIFRLVTRGTIEERMMQMTKK 758

Query: 1213 KLMLDQLFVNKSG----SQKEVEDILRWGTEELFND 1244
            K++L+ L V +      +Q+E++DILR+G  ELF++
Sbjct: 759  KMVLEHLVVGRMKKENINQEELDDILRYGAMELFSE 794



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 8/74 (10%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQK--------NDQLKPI 129
           C IC LGG+LLCCD+C   +HL CLDPP+K +P GKW CPKC           + Q++P+
Sbjct: 56  CSICHLGGDLLCCDTCTAVFHLGCLDPPMKVVPRGKWSCPKCVNPLGDVEKFIDTQMRPM 115

Query: 130 SNLDSISKRARSKI 143
                I+  A  K+
Sbjct: 116 KVPGRIAHNAEEKV 129


>gi|440906808|gb|ELR57029.1| Chromodomain-helicase-DNA-binding protein 3, partial [Bos grunniens
            mutus]
          Length = 1940

 Score =  557 bits (1436), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 339/790 (42%), Positives = 450/790 (56%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 516  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 575

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 576  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEE-DE 634

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 635  MNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPSSPTNDPTVKYET 691

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 692  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 751

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 752  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 809

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 810  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 869

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 870  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 929

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 930  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 988

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IKAS KL LL  ML+ L ++GHRVLI
Sbjct: 989  MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLI 1048

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN     +F FLLSTR+ 
Sbjct: 1049 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAHGAQQFCFLLSTRAG 1106

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1107 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1166

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1167 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1213

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1214 ----------------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNE 1248

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1249 YLSSFKVAQY 1258



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 426 CRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 468



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 339 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 396


>gi|348523828|ref|XP_003449425.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Oreochromis
            niloticus]
          Length = 2125

 Score =  557 bits (1435), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 339/799 (42%), Positives = 458/799 (57%), Gaps = 114/799 (14%)

Query: 605  VKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTT-- 652
            +KG+A   EF VK  G+S  H +WI E QL++       NY+ K          YG+   
Sbjct: 553  MKGRA-EREFFVKLTGQSYWHCTWITELQLEIFHSVMYRNYQRKTDMDEPPSLDYGSGGE 611

Query: 653  ----VINICDERWKQPQ---------------------RVISLRSSKDGTREAFVKWTGL 687
                V      R K PQ                     R+I+    K G     VKW  L
Sbjct: 612  DENGVGKSEKRRAKDPQYAILEDKYYKYGIKPEWMMIHRIINHSVDKKGIYHYLVKWRDL 671

Query: 688  PYDECTWEK--LDEP--ALEKYSHLT--DLFVQFERQTLKK------DASEDELPRGKGD 735
             YD+CTWE+  +D P  A+ K S+    D  ++ +    +K      D  EDE P   G 
Sbjct: 672  AYDQCTWERDDMDIPDFAIYKASYWKHRDAIMKEDPDKPRKIRNKNSDEGEDESP---GS 728

Query: 736  CQQSEIVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACA 793
                  +   EQP+ +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    
Sbjct: 729  PLTDPTIKYEEQPDFVTSTGGTLHLYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIV 788

Query: 794  FISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHA 853
            F+ SL+ E   K P LV  PLST+ NW  EF +WAP+  VV Y G   +RAIIR+ E+  
Sbjct: 789  FLYSLFKEGHTKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAIIRENEFSF 848

Query: 854  SDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGS 906
             D            ++ +  KF+VLLT+YE++  D + L+ + W  LVVDE HRLKN+ S
Sbjct: 849  DDTAVKGGKKAFKLRREAPIKFHVLLTSYELVTIDQTALKSIDWACLVVDEAHRLKNNQS 908

Query: 907  KLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKV 966
            K F  LN +   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++
Sbjct: 909  KFFRRLNDYKIDYKLLLTGTPLQNNLEELFHLLNFLTPNRFNNLEGFLEEFADISKEDQI 968

Query: 967  EELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKG 1026
            ++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LTKN++ L + G G
Sbjct: 969  KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKLILTKNFEALNSKGGG 1028

Query: 1027 VAQQSMLNIVMQLRKVCNHPYLIPGTE---PDSGSVEFLHEMRIKASAKLTLLHSMLKVL 1083
              Q S+LNI+M L+K CNHPYL P      P + S  +      KAS KLTLL  ML+ L
Sbjct: 1029 -NQVSLLNIMMDLKKCCNHPYLFPVASMEAPKTPSGAYEGSALTKASGKLTLLQKMLRKL 1087

Query: 1084 YKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RF 1142
             ++GHRVL+FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F
Sbjct: 1088 KEQGHRVLVFSQMTKMLDLLEDFLDCE-GYK-YERIDGGITGALRQEAIDRFNAPGACQF 1145

Query: 1143 VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASV 1202
             FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASV
Sbjct: 1146 CFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASV 1205

Query: 1203 EERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGE 1255
            EERI Q+AK+K+ML  L V     +K+GS  ++E++DIL++GTEELF D           
Sbjct: 1206 EERITQVAKRKMMLTHLVVRPGLGSKAGSMTKQELDDILKFGTEELFKDE---------- 1255

Query: 1256 NNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTD 1315
                                   GD  +D   EG+  I +D  AI RLLDRS   +  +D
Sbjct: 1256 ---------------------AEGDKVED---EGNV-IHYDSTAIERLLDRSQDDTDDSD 1290

Query: 1316 LAEGDLENDMLGSVKATEW 1334
            +      N+ L S K  ++
Sbjct: 1291 VQN---MNEYLSSFKVAQY 1306



 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 45/67 (67%)

Query: 54  RLKNEINADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGK 113
           R+ +E+    ++  ++ +D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+
Sbjct: 446 RVISEVGVRVATGAEEEDDDHMEFCRVCKDGGELLCCDTCTSSYHIHCLNPPLPEIPNGE 505

Query: 114 WQCPKCT 120
           W CP+CT
Sbjct: 506 WLCPRCT 512



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CL+P L + P GKW CP C ++  Q
Sbjct: 371 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDKAPEGKWSCPHCEKEGIQ 428


>gi|431894030|gb|ELK03836.1| Chromodomain-helicase-DNA-binding protein 3 [Pteropus alecto]
          Length = 2007

 Score =  557 bits (1435), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 339/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 555  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 614

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 615  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEE-DE 673

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 674  MNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPSSPTNDPTVKYET 730

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 731  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 790

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 791  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 848

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 849  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 908

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 909  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 968

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 969  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 1027

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IKAS KL LL  ML+ L ++GHRVLI
Sbjct: 1028 MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLI 1087

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1088 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1145

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1146 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1205

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1206 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1252

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1253 ----------------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNE 1287

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1288 YLSSFKVAQY 1297



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 459 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 507



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 378 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 435


>gi|432909970|ref|XP_004078255.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Oryzias
            latipes]
          Length = 1882

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 331/784 (42%), Positives = 453/784 (57%), Gaps = 102/784 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YG------------ 650
            EF VKW   S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 476  EFFVKWCNMSYWHCSWVKELQLELNCQVMFRNYQRKTDMDEPPPVDFGGEGDDDKSTKRK 535

Query: 651  ---TTVINICDE--------RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD- 698
                  +++ +E         W    RV++    K       +KW  LPYD+ TWE  D 
Sbjct: 536  NKDPLFVHMEEEFGRFGVKLEWLMIHRVLNHSVDKKNNVHYLIKWRDLPYDQSTWESEDM 595

Query: 699  -----EPALEKYSHLTDLFVQFERQ---TLKKDASEDELPRGKGDCQQSEIVALTEQPEE 750
                 +P  + Y +  +L +  E +    LKK     +  R   +      +    QPE 
Sbjct: 596  DIPEYDPYKQTYWNHRELMMGEEGRPVKKLKKQVKVKKAERPPANPIVDPTIKFDRQPEY 655

Query: 751  L--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPC 808
            L   GG L P+QLE LNWLR  W ++ + ILADEMGLGKTV    F+ SLY E  +K P 
Sbjct: 656  LDSTGGTLHPYQLEGLNWLRFSWAQATDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPF 715

Query: 809  LVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEW-------HASDPDNLNK 861
            LV  PLST+ NW  EF +WAP++ VV Y G   +RA+IR+ E+             +  K
Sbjct: 716  LVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEGNAIRGGKKASKMK 775

Query: 862  KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRV 921
            K S  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F LLN++S QH++
Sbjct: 776  KDSPVKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRLLNNYSLQHKL 835

Query: 922  LLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRL 981
            LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLRRL
Sbjct: 836  LLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRL 895

Query: 982  KKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRK 1041
            K D  +++P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L+K
Sbjct: 896  KADVFKHMPSKTELIVRVELSPMQKKYYKFILTRNFEALNTRGGG-NQVSLLNVVMDLKK 954

Query: 1042 VCNHPYLIPGTEPDSGSVE---FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTK 1098
             CNHPYL P    ++  +    +      KAS KL LL  M+K L + GHRVL+FSQMTK
Sbjct: 955  CCNHPYLFPAAATEAPKLPNGMYEGAALTKASGKLMLLQKMMKKLKEGGHRVLVFSQMTK 1014

Query: 1099 LLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINL 1157
            +LD+LED+L  E G K YER+DG V+   RQ AI RFN   + +F FLLSTR+ GLGINL
Sbjct: 1015 MLDLLEDFLENE-GYK-YERIDGGVTGNMRQEAIDRFNAPGAQQFAFLLSTRAGGLGINL 1072

Query: 1158 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD 1217
            A+ADTVIIYDSD+NPH DIQA +RAHRIGQ++++++YR V +ASVEERI Q+AKKK+ML 
Sbjct: 1073 ASADTVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTKASVEERITQVAKKKMMLT 1132

Query: 1218 QLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQK 1270
             L V     +K+G  S++E++DIL++GTEELF D   I   D  E+++S+          
Sbjct: 1133 HLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDE--IGDGDNKEDDSSV---------- 1180

Query: 1271 HRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVK 1330
                                  I +D+ AI+RLLDR+     +TD  E    N+ L S K
Sbjct: 1181 ----------------------IHYDDQAISRLLDRNQ---DATDDTEIQSMNEYLSSFK 1215

Query: 1331 ATEW 1334
              ++
Sbjct: 1216 VAQY 1219



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 4/52 (7%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C
Sbjct: 377 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 428


>gi|358417347|ref|XP_003583617.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 3 [Bos taurus]
          Length = 2012

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 339/790 (42%), Positives = 450/790 (56%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 560  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 619

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 620  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEE-DE 678

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 679  MNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPSSPTNDPTVKYET 735

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 736  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 795

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 796  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 853

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 854  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 913

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 914  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 973

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 974  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 1032

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IKAS KL LL  ML+ L ++GHRVLI
Sbjct: 1033 MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLI 1092

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN     +F FLLSTR+ 
Sbjct: 1093 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAHGAQQFCFLLSTRAG 1150

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1151 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1210

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1211 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1257

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1258 ----------------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNE 1292

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1293 YLSSFKVAQY 1302



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 470 CRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 512



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 383 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 440


>gi|162318864|gb|AAI56473.1| Chromodomain helicase DNA binding protein 3 [synthetic construct]
          Length = 2045

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 579  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 637

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 638  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 697

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 698  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 753

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 754  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 813

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 814  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 873

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 874  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 931

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 932  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 991

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 992  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1051

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1052 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1110

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1111 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1168

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1169 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1228

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1229 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1284

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1285 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1313

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1314 DATEDTDVQN---MNEYLSSFKVAQY 1336



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 498 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 546



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 417 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 474


>gi|355678671|gb|AER96180.1| chromodomain helicase DNA binding protein 3 [Mustela putorius furo]
          Length = 1740

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 339/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 424  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 483

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 484  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEE-DE 542

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 543  MNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPSSPTNDPTVKYES 599

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 600  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 659

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 660  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 717

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 718  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 777

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 778  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 837

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 838  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 896

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IKAS KL LL  ML+ L ++GHRVLI
Sbjct: 897  MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLI 956

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 957  FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1014

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1015 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1074

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1075 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1121

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1122 ----------------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNE 1156

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1157 YLSSFKVAQY 1166



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 328 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 376



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 247 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 304


>gi|348560832|ref|XP_003466217.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Cavia
            porcellus]
          Length = 1995

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 459/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V  +  ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 528  PDVPPARPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 586

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 587  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 646

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 647  WRDLPYDQSTWEE-DEMNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 702

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 703  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 762

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 763  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 822

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 823  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 880

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 881  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 940

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 941  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1000

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1001 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1059

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1060 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1117

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1118 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1177

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1178 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1233

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1234 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1262

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1263 DATEDTDVQN---MNEYLSSFKVAQY 1285



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 454 CRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 496



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 367 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 424


>gi|311268329|ref|XP_003132000.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2 [Sus
            scrofa]
          Length = 2002

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 339/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 549  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 608

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 609  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEE-DE 667

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 668  MNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPSSPTNDPTVKYET 724

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 725  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 784

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 785  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 842

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 843  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 902

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 903  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 962

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 963  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 1021

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IKAS KL LL  ML+ L ++GHRVLI
Sbjct: 1022 MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLI 1081

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1082 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1139

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1140 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1199

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1200 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1246

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1247 ----------------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNE 1281

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1282 YLSSFKVAQY 1291



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 459 CRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|332847230|ref|XP_512012.3| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 3 [Pan
            troglodytes]
          Length = 2058

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 592  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 650

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 651  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 710

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 711  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 766

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 767  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 826

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 827  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 886

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 887  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 944

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 945  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 1004

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 1005 ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1064

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1065 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1123

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1124 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1181

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1182 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1241

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1242 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1297

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1298 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1326

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1327 DATEDTDVQN---MNEYLSSFKVAQY 1349



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 511 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 559



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 430 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 487


>gi|359076762|ref|XP_003587462.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Bos taurus]
          Length = 1833

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 339/790 (42%), Positives = 450/790 (56%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 381  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 440

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 441  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEE-DE 499

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 500  MNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPSSPTNDPTVKYET 556

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 557  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 616

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 617  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 674

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 675  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 734

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 735  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 794

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 795  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 853

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IKAS KL LL  ML+ L ++GHRVLI
Sbjct: 854  MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLI 913

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN     +F FLLSTR+ 
Sbjct: 914  FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAHGAQQFCFLLSTRAG 971

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 972  GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1031

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1032 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1078

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1079 ----------------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNE 1113

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1114 YLSSFKVAQY 1123



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 291 CRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 333



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 204 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 261


>gi|158420731|ref|NP_001005271.2| chromodomain-helicase-DNA-binding protein 3 isoform 3 [Homo sapiens]
          Length = 2059

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 593  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 651

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 652  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 711

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 712  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 767

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 768  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 827

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 828  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 887

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 888  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 945

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 946  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 1005

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 1006 ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1065

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1066 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1124

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1125 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1182

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1183 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1242

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1243 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1298

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1299 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1327

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1328 DATEDTDVQN---MNEYLSSFKVAQY 1350



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 512 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 560



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 431 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 488


>gi|426384011|ref|XP_004058570.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
            [Gorilla gorilla gorilla]
          Length = 2000

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPPHRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 828

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 829  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 886

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 887  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 946

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 947  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1006

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1007 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1065

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1066 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1123

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1124 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1183

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1184 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1239

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1240 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1268

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1269 DATEDTDVQN---MNEYLSSFKVAQY 1291



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|52630326|ref|NP_001005273.1| chromodomain-helicase-DNA-binding protein 3 isoform 1 [Homo sapiens]
 gi|88911273|sp|Q12873.3|CHD3_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 3;
            Short=CHD-3; AltName: Full=ATP-dependent helicase CHD3;
            AltName: Full=Mi-2 autoantigen 240 kDa protein; AltName:
            Full=Mi2-alpha; AltName: Full=Zinc finger helicase;
            Short=hZFH
 gi|119610521|gb|EAW90115.1| chromodomain helicase DNA binding protein 3, isoform CRA_b [Homo
            sapiens]
          Length = 2000

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 828

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 829  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 886

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 887  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 946

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 947  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1006

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1007 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1065

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1066 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1123

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1124 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1183

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1184 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1239

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1240 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1268

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1269 DATEDTDVQN---MNEYLSSFKVAQY 1291



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|332847232|ref|XP_003339343.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Pan
            troglodytes]
          Length = 2000

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 828

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 829  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 886

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 887  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 946

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 947  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1006

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1007 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1065

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1066 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1123

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1124 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1183

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1184 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1239

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1240 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1268

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1269 DATEDTDVQN---MNEYLSSFKVAQY 1291



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|403274994|ref|XP_003929245.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
            [Saimiri boliviensis boliviensis]
          Length = 2000

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 828

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 829  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 886

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 887  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 946

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 947  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1006

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1007 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1065

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1066 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1123

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1124 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1183

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1184 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1239

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1240 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1268

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1269 DATEDTDVQN---MNEYLSSFKVAQY 1291



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|345800551|ref|XP_536627.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 3 [Canis lupus familiaris]
          Length = 1999

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 339/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 548  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 607

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 608  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEE-DE 666

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 667  MNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPSSPTNDPTVKYET 723

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 724  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 783

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 784  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 841

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 842  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 901

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 902  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 961

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 962  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 1020

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IKAS KL LL  ML+ L ++GHRVLI
Sbjct: 1021 MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLI 1080

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1081 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1138

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1139 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1198

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1199 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1245

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1246 ----------------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNE 1280

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1281 YLSSFKVAQY 1290



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 452 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 500



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|426238820|ref|XP_004013342.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 3 [Ovis aries]
          Length = 2020

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 339/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 567  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 626

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 627  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEE-DE 685

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 686  MNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPSSPTNDPTVKYET 742

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 743  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 802

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 803  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 860

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 861  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 920

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 921  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 980

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 981  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 1039

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IKAS KL LL  ML+ L ++GHRVLI
Sbjct: 1040 MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLI 1099

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1100 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1157

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1158 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1217

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1218 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1264

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1265 ----------------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNE 1299

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1300 YLSSFKVAQY 1309



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 477 CRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 519



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 390 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 447


>gi|354469736|ref|XP_003497281.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 3-like [Cricetulus griseus]
          Length = 1959

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 550  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 608

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 609  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVK 668

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 669  WKDLPYDQSTWEE-DEMNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 724

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 725  LPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 784

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 785  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 844

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 845  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 902

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 903  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 962

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 963  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1022

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1023 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1081

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1082 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1139

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1140 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1199

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1200 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1255

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1256 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1284

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1285 DDTEDTDVQN---MNEYLSSFKVAQY 1307



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 469 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 517



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 389 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 446


>gi|62530244|gb|AAX85379.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
            norvegicus]
 gi|62530246|gb|AAX85380.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
            norvegicus]
 gi|62530248|gb|AAX85381.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
            norvegicus]
 gi|62530250|gb|AAX85382.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
            norvegicus]
          Length = 1959

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 338/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 505  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 564

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 565  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEE-DE 623

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 624  MNIPEYDDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKEIQGDGPPSSPTNDPTVKYET 680

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 681  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 740

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 741  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 798

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 799  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 858

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 859  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 918

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 919  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 977

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IK+S KL LL  ML+ L ++GHRVLI
Sbjct: 978  MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLI 1037

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1038 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1095

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1096 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1155

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1156 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1202

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1203 ----------------------EEDSSVIHYDNEAIARLLDRNQDATDDTDVQN---MNE 1237

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1238 YLSSFKVAQY 1247



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 415 CRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 457



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 329 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 386


>gi|52630322|ref|NP_005843.2| chromodomain-helicase-DNA-binding protein 3 isoform 2 [Homo sapiens]
 gi|119610520|gb|EAW90114.1| chromodomain helicase DNA binding protein 3, isoform CRA_a [Homo
            sapiens]
 gi|119610522|gb|EAW90116.1| chromodomain helicase DNA binding protein 3, isoform CRA_a [Homo
            sapiens]
          Length = 1966

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 828

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 829  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 886

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 887  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 946

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 947  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1006

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1007 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1065

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1066 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1123

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1124 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1183

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1184 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1239

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1240 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1268

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1269 DATEDTDVQN---MNEYLSSFKVAQY 1291



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|397477893|ref|XP_003810301.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 3 [Pan paniscus]
          Length = 2011

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPPPXPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 828

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 829  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 886

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 887  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 946

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 947  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1006

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1007 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1065

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1066 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1123

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1124 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1183

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1184 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1239

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1240 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1268

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1269 DATEDTDVQN---MNEYLSSFKVAQY 1291



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|3298562|gb|AAC39923.1| zinc-finger helicase [Homo sapiens]
          Length = 2000

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 828

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 829  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 886

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 887  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 946

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 947  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1006

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1007 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1065

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1066 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1123

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1124 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1183

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1184 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1239

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1240 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1268

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1269 DATEDTDVQN---MNEYLSSFKVAQY 1291



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|402898650|ref|XP_003912333.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
            [Papio anubis]
          Length = 2000

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPAPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 828

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 829  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 886

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 887  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 946

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 947  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1006

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1007 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1065

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1066 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1123

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1124 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1183

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1184 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1239

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1240 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1268

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1269 DATEDTDVQN---MNEYLSSFKVAQY 1291



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|403274996|ref|XP_003929246.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
            [Saimiri boliviensis boliviensis]
          Length = 1966

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 828

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 829  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 886

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 887  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 946

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 947  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1006

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1007 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1065

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1066 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1123

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1124 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1183

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1184 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1239

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1240 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1268

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1269 DATEDTDVQN---MNEYLSSFKVAQY 1291



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|392332091|ref|XP_001079343.3| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Rattus
            norvegicus]
          Length = 2080

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 338/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 626  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 685

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 686  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEE-DE 744

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 745  MNIPEYDDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKEIQGDGPPSSPTNDPTVKYET 801

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 802  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 861

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 862  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 919

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 920  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 979

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 980  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 1039

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 1040 HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 1098

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IK+S KL LL  ML+ L ++GHRVLI
Sbjct: 1099 MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLI 1158

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1159 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1216

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1217 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1276

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1277 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1323

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1324 ----------------------EEDSSVIHYDNEAIARLLDRNQDATDDTDVQN---MNE 1358

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1359 YLSSFKVAQY 1368



 Score = 77.0 bits (188), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 38/54 (70%)

Query: 67  KKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +++  D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 525 RRREEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 578



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 449 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 506


>gi|383415425|gb|AFH30926.1| chromodomain-helicase-DNA-binding protein 3 isoform 1 [Macaca
            mulatta]
          Length = 1996

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 530  PDVPAPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 588

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 589  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 648

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 649  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 704

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 705  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 764

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 765  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 824

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 825  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 882

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 883  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 942

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 943  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1002

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1003 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1061

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1062 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1119

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1120 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1179

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1180 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1235

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1236 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1264

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1265 DATEDTDVQN---MNEYLSSFKVAQY 1287



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 449 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 497



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 368 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 425


>gi|426384013|ref|XP_004058571.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
            [Gorilla gorilla gorilla]
          Length = 1966

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPPHRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 828

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 829  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 886

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 887  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 946

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 947  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1006

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1007 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1065

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1066 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1123

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1124 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1183

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1184 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1239

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1240 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1268

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1269 DATEDTDVQN---MNEYLSSFKVAQY 1291



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|402898652|ref|XP_003912334.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
            [Papio anubis]
          Length = 1966

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPAPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 828

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 829  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 886

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 887  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 946

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 947  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1006

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1007 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1065

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1066 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1123

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1124 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1183

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1184 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1239

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1240 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1268

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1269 DATEDTDVQN---MNEYLSSFKVAQY 1291



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|332847234|ref|XP_003315413.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2 [Pan
            troglodytes]
          Length = 1966

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 828

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 829  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 886

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 887  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 946

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 947  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1006

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1007 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1065

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1066 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1123

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1124 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1183

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1184 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1239

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1240 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1268

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1269 DATEDTDVQN---MNEYLSSFKVAQY 1291



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|62530242|gb|AAX85378.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
            norvegicus]
          Length = 1927

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 338/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 507  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 566

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 567  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEE-DE 625

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 626  MNIPEYDDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKEIQGDGPPSSPTNDPTVKYET 682

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 683  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 742

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 743  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 800

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 801  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 860

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 861  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 920

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 921  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 979

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IK+S KL LL  ML+ L ++GHRVLI
Sbjct: 980  MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLI 1039

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1040 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1097

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1098 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1157

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1158 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1204

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1205 ----------------------EEDSSVIHYDNEAIARLLDRNQDATDDTDVQN---MNE 1239

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1240 YLSSFKVAQY 1249



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 417 CRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 459



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 331 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 388


>gi|392351358|ref|XP_220602.6| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Rattus
            norvegicus]
          Length = 2069

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 338/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 615  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 674

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 675  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEE-DE 733

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 734  MNIPEYDDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKEIQGDGPPSSPTNDPTVKYET 790

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 791  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 850

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 851  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 908

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 909  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 968

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 969  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 1028

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 1029 HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 1087

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IK+S KL LL  ML+ L ++GHRVLI
Sbjct: 1088 MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLI 1147

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1148 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1205

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1206 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1265

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1266 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1312

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1313 ----------------------EEDSSVIHYDNEAIARLLDRNQDATDDTDVQN---MNE 1347

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1348 YLSSFKVAQY 1357



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 525 CRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 567



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 439 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 496


>gi|148678548|gb|EDL10495.1| mCG140617 [Mus musculus]
          Length = 1826

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 356  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 414

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 415  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVK 474

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 475  WKDLPYDQSTWEE-DEMNIPEYDDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 530

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 531  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 590

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 591  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 650

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 651  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 708

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 709  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 768

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 769  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 828

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 829  LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLL 887

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 888  QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 945

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 946  APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1005

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1006 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1061

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1062 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1090

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1091 DATEDTDVQN---MNEYLSSFKVAQY 1113



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 275 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 323



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 195 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 252


>gi|395836468|ref|XP_003791176.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
            [Otolemur garnettii]
          Length = 1998

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 338/790 (42%), Positives = 450/790 (56%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 546  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 605

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 606  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKRGNYHYLVKWRDLPYDQSTWEE-DE 664

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 665  MNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPSSPTNDPTVKYET 721

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 722  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 781

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 782  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 839

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 840  KAFKMKREAQVKFHVLLTSYELITIDQAALGSICWACLVVDEAHRLKNNQSKFFRVLNGY 899

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 900  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 959

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 960  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 1018

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IKAS KL LL  ML+ L ++GHRVLI
Sbjct: 1019 MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLI 1078

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1079 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1136

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1137 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1196

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D    N  D  E ++S+    
Sbjct: 1197 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDE---NEGDNKEEDSSV---- 1249

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                        I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1250 ----------------------------IHYDNEAIARLLDRNQDATEDTDVQN---MNE 1278

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1279 YLSSFKVAQY 1288



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 450 DDHMEYCRVCKDGGELLCCDTCISSYHIHCLNPPLPDIPNGEWLCPRCT 498



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 369 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 426


>gi|334323402|ref|XP_001369227.2| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Monodelphis
            domestica]
          Length = 2114

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 337/790 (42%), Positives = 452/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 700  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 759

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 760  SKDPHYAEMEEKFYRFGIKPEWMTVHRIINHSMDKKGNYHYLVKWRDLPYDQSTWEE-DE 818

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y    + + +     + +D ++   PR         +GD   +       V    
Sbjct: 819  MNIPEYDAHKNSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPTSPTNDPTVKYEN 875

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 876  QPRFITATGGTLHLYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 935

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNK--- 861
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN  K   
Sbjct: 936  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 993

Query: 862  ------KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                  + +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 994  KAFKMRREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 1053

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 1054 KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 1113

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 1114 HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 1172

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IK+S KL LL  ML+ L ++GHRVLI
Sbjct: 1173 MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLI 1232

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1233 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1290

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1291 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1350

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1351 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1397

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1398 ----------------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNE 1432

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1433 YLSSFKVAQY 1442



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 604 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 652



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 523 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 580


>gi|311268331|ref|XP_003131999.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1 [Sus
            scrofa]
          Length = 1968

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 339/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 549  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 608

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 609  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEE-DE 667

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 668  MNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPSSPTNDPTVKYET 724

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 725  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 784

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 785  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 842

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 843  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 902

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 903  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 962

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 963  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 1021

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IKAS KL LL  ML+ L ++GHRVLI
Sbjct: 1022 MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLI 1081

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1082 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1139

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1140 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1199

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1200 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1246

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1247 ----------------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNE 1281

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1282 YLSSFKVAQY 1291



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 459 CRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|62530240|gb|AAX85377.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
            norvegicus]
          Length = 1924

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 338/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 504  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 563

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 564  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEE-DE 622

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 623  MNIPEYDDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKEIQGDGPPSSPTNDPTVKYET 679

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 680  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 739

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 740  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 797

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 798  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 857

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 858  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 917

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 918  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 976

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IK+S KL LL  ML+ L ++GHRVLI
Sbjct: 977  MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLI 1036

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1037 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1094

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1095 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1154

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1155 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1201

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1202 ----------------------EEDSSVIHYDNEAIARLLDRNQDATDDTDVQN---MNE 1236

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1237 YLSSFKVAQY 1246



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 414 CRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 456



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 328 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 385


>gi|62530236|gb|AAX85375.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
            norvegicus]
 gi|62530238|gb|AAX85376.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
            norvegicus]
          Length = 1925

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 338/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 505  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 564

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 565  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEE-DE 623

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 624  MNIPEYDDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKEIQGDGPPSSPTNDPTVKYET 680

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 681  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 740

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 741  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 798

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 799  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 858

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 859  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 918

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 919  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 977

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IK+S KL LL  ML+ L ++GHRVLI
Sbjct: 978  MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLI 1037

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1038 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1095

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1096 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1155

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1156 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1202

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1203 ----------------------EEDSSVIHYDNEAIARLLDRNQDATDDTDVQN---MNE 1237

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1238 YLSSFKVAQY 1247



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 415 CRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 457



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 329 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 386


>gi|357527416|ref|NP_666131.3| chromodomain helicase DNA binding protein 3 [Mus musculus]
          Length = 2055

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 586  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 644

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 645  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVK 704

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 705  WKDLPYDQSTWEE-DEMNIPEYDDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 760

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 761  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 820

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 821  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 880

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 881  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 938

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 939  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 998

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 999  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1058

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1059 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLL 1117

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1118 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1175

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1176 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1235

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1236 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1291

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1292 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1320

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1321 DATEDTDVQN---MNEYLSSFKVAQY 1343



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 505 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 553



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 425 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 482


>gi|149053041|gb|EDM04858.1| chromodomain helicase DNA binding protein 3 [Rattus norvegicus]
          Length = 1827

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 338/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 372  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 431

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 432  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEE-DE 490

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 491  MNIPEYDDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKEIQGDGPPSSPTNDPTVKYET 547

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 548  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 607

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 608  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 665

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 666  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 725

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 726  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 785

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 786  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 844

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IK+S KL LL  ML+ L ++GHRVLI
Sbjct: 845  MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLI 904

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 905  FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 962

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 963  GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1022

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1023 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1069

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1070 ----------------------EEDSSVIHYDNEAIARLLDRNQDATDDTDVQN---MNE 1104

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1105 YLSSFKVAQY 1114



 Score = 77.0 bits (188), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 38/54 (70%)

Query: 67  KKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +++  D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 271 RRREEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 324



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 195 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 252


>gi|417413984|gb|JAA53300.1| Putative chromatin remodeling complex wstf-iswi small subunit,
            partial [Desmodus rotundus]
          Length = 1846

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 338/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 516  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 575

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 576  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEE-DE 634

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   +       V    
Sbjct: 635  MNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPNSPTNDPTVKYET 691

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 692  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 751

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 752  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 809

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 810  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 869

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 870  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 929

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 930  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 988

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IKAS KL LL  ML+ L ++GHRVLI
Sbjct: 989  MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLI 1048

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1049 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1106

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1107 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1166

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1167 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1213

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1214 ----------------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNE 1248

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1249 YLSSFKVAQY 1258



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 420 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 468



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 339 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 396


>gi|390462993|ref|XP_002806848.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 3, partial [Callithrix jacchus]
          Length = 1943

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 459/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 524  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 582

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 583  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 642

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D+++   PR         +GD
Sbjct: 643  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDSAQ---PRKYKKKKKELQGD 698

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 699  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 758

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 759  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 818

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 819  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 876

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 877  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 936

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 937  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 996

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 997  LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1055

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1056 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1113

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1114 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1173

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1174 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1229

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1230 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1258

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1259 DATEDTDVQN---MNEYLSSFKVAQY 1281



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 443 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 491



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 362 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 419


>gi|291405109|ref|XP_002719030.1| PREDICTED: chromodomain helicase DNA binding protein 3-like
            [Oryctolagus cuniculus]
          Length = 1910

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 529  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 587

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 588  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 647

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 648  WRDLPYDQSTWEE-DEMNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 703

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 704  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 763

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 764  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 823

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 824  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 881

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 882  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 941

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 942  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1001

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1002 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1060

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1061 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1118

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1119 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1178

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1179 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1234

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1235 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1263

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1264 DATEDTDVQN---MNEYLSSFKVAQY 1286



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 447 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 495



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 366 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 423


>gi|113678140|ref|NP_001038323.1| chromodomain helicase DNA binding protein 4 [Danio rerio]
          Length = 1929

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 332/795 (41%), Positives = 453/795 (56%), Gaps = 111/795 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKY-----------GTTVINICDER- 660
            EF VKW   S  H SW+ E QL++  +    NY+ K            G       D+R 
Sbjct: 524  EFFVKWQNMSYWHCSWVTELQLEIHCQVMFRNYQRKNDMDEPPPIDFGGEGEEEKSDKRK 583

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE--KL 697
                                 W    R+++    K       +KW  L YD+ TWE   +
Sbjct: 584  KKDPTYARMEEKYYRFGIKMEWMVIHRILNHSVDKKNNCHYLIKWRDLTYDQATWELEDM 643

Query: 698  DEPALEKYSHLTDLFVQFERQTLKKDASED-----------ELPRGKGDCQQSEIVALTE 746
            D P  + Y     L     R+ +  D  +            +L R   +      +    
Sbjct: 644  DLPDYDTYK----LQYWNHRELMMGDEGKPGKKIKIKGKMRKLDRPPENPVVDPTIKFER 699

Query: 747  QPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP+ L   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +
Sbjct: 700  QPDYLDTTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHS 759

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD--------P 856
            K P LV  PLST+ NW  EF +WAP++ VV Y G   +RA+IR+ E+   +        P
Sbjct: 760  KGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFENNAIRGGKKP 819

Query: 857  DNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFS 916
              + KK +S KF+VLLT+YE+I  D++ L  + W  LVVDE HRLKN+ SK F +LN++ 
Sbjct: 820  SKM-KKEASVKFHVLLTSYELITIDTAVLGSIDWACLVVDEAHRLKNNQSKFFRILNNYP 878

Query: 917  FQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPH 976
             QH++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PH
Sbjct: 879  LQHKLLLTGTPLQNNLEELFHLLNFLTPERFSNLEGFLEEFADIAKEDQIKKLHDMLGPH 938

Query: 977  MLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIV 1036
            MLRRLK D  +++P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+V
Sbjct: 939  MLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKFILTRNFEALNTRGGG-NQVSLLNVV 997

Query: 1037 MQLRKVCNHPYLIPGTEPDSGSVE---FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIF 1093
            M L+K CNHPYL P    ++  +    +      K+S KL LL  ML+ L + GHRVLIF
Sbjct: 998  MDLKKCCNHPYLFPAAAMEAAKMPNGMYEGGGLTKSSGKLLLLQKMLRKLKEGGHRVLIF 1057

Query: 1094 SQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCG 1152
            SQMTK+LD+LED+L  E G K YER+DG ++ G RQ AI RFN   + +FVFLLSTR+ G
Sbjct: 1058 SQMTKMLDLLEDFLENE-GYK-YERIDGGITGGMRQEAIDRFNAPGAPQFVFLLSTRAGG 1115

Query: 1153 LGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKK 1212
            LGINLATADTV+IYDSD+NPH DIQA +RAHRIGQ+K++++YR V +ASVEERI Q+AKK
Sbjct: 1116 LGINLATADTVVIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKK 1175

Query: 1213 KLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
            K+ML  L V     +K+G  S++E++DIL++GTEELF D      +  GEN    E+   
Sbjct: 1176 KMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKD------EGEGENKEGQED--- 1226

Query: 1266 DLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDM 1325
                                    S+ I +D+ AI RLLDR+     +TD  E    N+ 
Sbjct: 1227 ------------------------SSVIHYDDKAIDRLLDRNQ---DATDDTELQSMNEY 1259

Query: 1326 LGSVKATEWNEETTE 1340
            L S K  ++ EE  +
Sbjct: 1260 LSSFKVAQYVEEEVQ 1274



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCDSCP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 427 DDHHMEFCRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRCT 476



 Score = 70.1 bits (170), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 4/52 (7%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P G W CP C
Sbjct: 347 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHC 398


>gi|5911978|emb|CAB55959.1| hypothetical protein [Homo sapiens]
          Length = 1388

 Score =  555 bits (1429), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 332/787 (42%), Positives = 460/787 (58%), Gaps = 86/787 (10%)

Query: 641  KLENYKAKYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEP 700
            K+E    +YG          W    R+++    K G     +KW  LPYD+CTWE +D+ 
Sbjct: 11   KMEERFYRYG------IKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWE-IDDI 63

Query: 701  ALEKYSHLTDLFVQFERQTLKKDA-------------SEDELPRGKGDCQQSEIVALTEQ 747
             +  Y +L   +       L +D               +D+  +          V   +Q
Sbjct: 64   DIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQEKPPDTPIVDPTVKFDKQ 123

Query: 748  PEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAK 805
            P  +   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K
Sbjct: 124  PWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSK 183

Query: 806  LPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN----- 860
             P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D    +     
Sbjct: 184  GPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVF 243

Query: 861  --KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQ 918
              KK    KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS+   
Sbjct: 244  RMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKID 303

Query: 919  HRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHML 978
            +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ PHML
Sbjct: 304  YKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 363

Query: 979  RRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQ 1038
            RRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M 
Sbjct: 364  RRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLNIMMD 422

Query: 1039 LRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQ 1095
            L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L  EGHRVLIFSQ
Sbjct: 423  LKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQ 482

Query: 1096 MTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLG 1154
            MTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+ GLG
Sbjct: 483  MTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLG 540

Query: 1155 INLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKL 1214
            INLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AK+K+
Sbjct: 541  INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 600

Query: 1215 MLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDL 1267
            ML  L V     +KSGS  ++E++DIL++GTEELF D       D+    +  +  V  +
Sbjct: 601  MLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD-------DVEGMMSQGQRPVTPI 653

Query: 1268 EQKHRKRGGGL-------------GDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGST 1314
                  +GG L             GD   +K  E S+ I +D+ AI++LLDR+     +T
Sbjct: 654  PDVQSSKGGNLAASAKKKHGSTPPGD---NKDVEDSSVIHYDDAAISKLLDRNQ---DAT 707

Query: 1315 DLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIEEN 1372
            D  E    N+ L S K  ++   EE   ++ E  +            ++EEN    ++ +
Sbjct: 708  DDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREII-----------KQEEN----VDPD 752

Query: 1373 EWDRLLR 1379
             W++LLR
Sbjct: 753  YWEKLLR 759


>gi|2645433|gb|AAB87383.1| CHD3 [Homo sapiens]
          Length = 1944

 Score =  554 bits (1428), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 341/806 (42%), Positives = 458/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 828

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 829  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 886

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 887  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 946

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 947  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1006

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1007 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1065

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1066 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1123

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1124 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1183

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1184 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1239

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1240 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1268

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1269 DATEDTDVQN---MNEYLSSFKVAQY 1291



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|395836470|ref|XP_003791177.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
            [Otolemur garnettii]
          Length = 1964

 Score =  554 bits (1427), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 338/790 (42%), Positives = 450/790 (56%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 546  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 605

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 606  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKRGNYHYLVKWRDLPYDQSTWEE-DE 664

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 665  MNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPSSPTNDPTVKYET 721

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 722  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 781

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 782  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 839

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 840  KAFKMKREAQVKFHVLLTSYELITIDQAALGSICWACLVVDEAHRLKNNQSKFFRVLNGY 899

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 900  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 959

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 960  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 1018

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IKAS KL LL  ML+ L ++GHRVLI
Sbjct: 1019 MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLI 1078

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1079 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1136

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1137 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1196

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D    N  D  E ++S+    
Sbjct: 1197 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDE---NEGDNKEEDSSV---- 1249

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                        I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1250 ----------------------------IHYDNEAIARLLDRNQDATEDTDVQN---MNE 1278

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1279 YLSSFKVAQY 1288



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 450 DDHMEYCRVCKDGGELLCCDTCISSYHIHCLNPPLPDIPNGEWLCPRCT 498



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 369 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 426


>gi|297821893|ref|XP_002878829.1| PKL/SSL2 [Arabidopsis lyrata subsp. lyrata]
 gi|297324668|gb|EFH55088.1| PKL/SSL2 [Arabidopsis lyrata subsp. lyrata]
          Length = 1399

 Score =  554 bits (1427), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 301/684 (44%), Positives = 430/684 (62%), Gaps = 62/684 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR------KLENYKAKYGTTVINICDE------R 660
            ++LVKW G S +H SW+PE + +   K       ++ N+  +   +V N  D+       
Sbjct: 130  QYLVKWKGLSYLHCSWVPEKEFQKAYKSNHRLKTRVNNFHRQM-ESVNNSEDDFVAIRPE 188

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTL 720
            W    R+++ R  +DG  E  VK+  L YDEC WE   E  +  + +    F     +T 
Sbjct: 189  WTTVDRILACRE-EDGELEYLVKYKELSYDECYWES--ESDISTFQNEIQRFKDVNSRTR 245

Query: 721  K-KDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            + KD      PR   D Q          PE LKG  L P+QLE LN+LR  W K  +VIL
Sbjct: 246  RGKDVDHKRNPR---DFQH-----FDHTPEFLKG-LLHPYQLEGLNFLRFSWSKQTHVIL 296

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ + A ++SL+ E    +P LV+ PLST+ NW  EFA WAP +NVV Y G 
Sbjct: 297  ADEMGLGKTIQSIALLASLFEE--NLIPHLVIAPLSTLRNWEREFATWAPQMNVVMYFGT 354

Query: 840  AKARAIIRQYEWHASDPDNL-----------NKKTSSYKFNVLLTTYEMILADSSHLRGV 888
            ++ARA+IR++E++ S                  K    KF+VLLT+YEMI  D++ L+ +
Sbjct: 355  SQARAVIREHEFYFSKDKKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDTAVLKPI 414

Query: 889  PWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 948
             WE ++VDEGHRLKN  SKLFS L  +   HR+LLTGTPLQNN+ E++ L++FL    F 
Sbjct: 415  KWECMIVDEGHRLKNKDSKLFSSLTQYLSNHRILLTGTPLQNNLDELFMLMHFLDAGKFG 474

Query: 949  SLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEY 1008
            SL  F+E+F D+   +++  L K++APH+LRR+KKD M+++PPK E ++ V+LSS+Q EY
Sbjct: 475  SLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEY 534

Query: 1009 YRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIK 1068
            Y+A+ T+NYQ+L    KG AQ S+ NI+M+LRKVC HPY++ G EP         +  ++
Sbjct: 535  YKAIFTRNYQVLTK--KGGAQISLNNIMMELRKVCCHPYMLEGVEPAIHDANEAFKQLLE 592

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPK-------------T 1115
            +  KL LL  M+  L ++GHRVLI++Q   +LD+LEDY + +F                 
Sbjct: 593  SCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKFQHMLDLLEDYCSYKKWN 652

Query: 1116 YERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHA 1174
            YER+DG V   +RQ  I RFN ++ ++F FLLSTR+ GLGINLATADTVIIYDSD+NPHA
Sbjct: 653  YERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 712

Query: 1175 DIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----SGSQKEV 1230
            D+QAM RAHR+GQ+ ++++YRL+ R ++EER++QL KKK++L+ L V K    + +Q+E+
Sbjct: 713  DLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQNINQEEL 772

Query: 1231 EDILRWGTEELF---NDSPGINGK 1251
            +DI+R+G++ELF   +D  G +GK
Sbjct: 773  DDIIRYGSKELFASEDDEAGKSGK 796



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSI 135
           C  C    NL+ C++C   +H +CL PPLK      W+CP+C      + P++ +D I
Sbjct: 52  CQACGESANLVSCNTCTYAFHAKCLVPPLKDASVENWRCPEC------VSPLNEIDKI 103


>gi|395533467|ref|XP_003768781.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 3 [Sarcophilus harrisii]
          Length = 1971

 Score =  554 bits (1427), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 337/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 524  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 583

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 584  SKDPHYAEMEEKFYRFGIKPEWMTVHRIINHSMDKKGNYHYLVKWRDLPYDQSTWEE-DE 642

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGK--------GDCQQSE-----IVALTE 746
              + +Y    + + +     + +D ++   PR          GD   +       V    
Sbjct: 643  MNIPEYDAHKNSYWRHRELIMGEDPAQ---PRKYKKKKKELLGDGPPTSPTNDPTVKYEN 699

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 700  QPRFITATGGTLHLYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 759

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNK--- 861
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN  K   
Sbjct: 760  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 817

Query: 862  ------KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                  + +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 818  KAFKMRREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 877

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 878  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 937

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 938  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 996

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IK+S KL LL  ML+ L ++GHRVLI
Sbjct: 997  MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLI 1056

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1057 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1114

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1115 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1174

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1175 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1221

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1222 ----------------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNE 1256

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1257 YLSSFKVAQY 1266



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 428 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 476



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 347 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 404


>gi|432105627|gb|ELK31821.1| Chromodomain-helicase-DNA-binding protein 3 [Myotis davidii]
          Length = 1998

 Score =  553 bits (1426), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 337/790 (42%), Positives = 451/790 (57%), Gaps = 115/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 547  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 606

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 607  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEE-DE 665

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   +       V    
Sbjct: 666  MNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPNSPTNDPTVKYET 722

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 723  QPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 782

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 783  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 840

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 841  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 900

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 901  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 960

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 961  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 1019

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IK+S KL LL  ML+ L ++GHRVLI
Sbjct: 1020 MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLI 1079

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1080 FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 1137

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1138 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1197

Query: 1212 KKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN        
Sbjct: 1198 RKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK------- 1244

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                                   E S+ I +D  AIARLLDR+   +  TD+      N+
Sbjct: 1245 ----------------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNE 1279

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1280 YLSSFKVAQY 1289



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 451 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 499



 Score = 73.9 bits (180), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 370 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 427


>gi|224143281|ref|XP_002324903.1| chromatin remodeling complex subunit [Populus trichocarpa]
 gi|222866337|gb|EEF03468.1| chromatin remodeling complex subunit [Populus trichocarpa]
          Length = 1334

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 304/709 (42%), Positives = 429/709 (60%), Gaps = 87/709 (12%)

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE-----KLDEPALEKYSHLTDLFVQF 715
            W    R+++ R   +G +E  VK+  LPYDEC WE        +P +E+++ +     + 
Sbjct: 180  WTTVDRILACRGV-EGEKEYLVKYKELPYDECYWEFESDVSTFQPEIERFNRIQSRSHKP 238

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALF--------------PHQL 761
             +Q      + D   + K + QQ E       PE L GG  F              P+QL
Sbjct: 239  SKQKSSLQDATDSKKKSK-EFQQYE-----HSPEFLSGGTSFHLIAPVLVIEGSLHPYQL 292

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
            E LN+LR  W K  +VILADEMGLGKT+ + AF++SL+ E  +    LV+ PLST+ NW 
Sbjct: 293  EGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFEEGISH--HLVVAPLSTLRNWE 350

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWH-----------ASDPDNLNKKTSSYKFNV 870
             EFA WAP +NVV Y G A+ARA+IR+YE++            S      +K    KF+V
Sbjct: 351  REFATWAPQMNVVMYVGSAQARAVIREYEFYYPKKHKKIKKKKSGQVVTERKQDRIKFDV 410

Query: 871  LLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQN 930
            LLT+YEMI  D++ L+ + WE ++VDEGHRLKN  SKLF  +  +   HRVLLTGTPLQN
Sbjct: 411  LLTSYEMINLDTTSLKPIKWECMIVDEGHRLKNKDSKLFLSMKQYYSNHRVLLTGTPLQN 470

Query: 931  NIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
            N+ E++ L++FL    F SL  F+E+F D+   +++  L K++APH+LRR+KKD M+ +P
Sbjct: 471  NLDELFMLMHFLDAGKFASLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELP 530

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 1050
            PK E ++ VELSS Q EYY+A+LT+NYQIL    +G AQ S++N+VM+LRK+C HPY++ 
Sbjct: 531  PKKELILRVELSSKQKEYYKAILTRNYQILTR--RGGAQISLINVVMELRKLCCHPYMLE 588

Query: 1051 GTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIE 1110
            G EPD        +  ++ S KL LLH M+  L ++GHRVLI+SQ   +LD+LEDY    
Sbjct: 589  GVEPDIEDTNESFKQLVETSGKLQLLHKMMVRLKEQGHRVLIYSQFQHMLDLLEDYCT-- 646

Query: 1111 FGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSD 1169
                TYER+DG V   +RQ  I RFN ++ SRF FLLSTR+ GLGINLATADTVIIYDSD
Sbjct: 647  HKKWTYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSD 706

Query: 1170 FNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----SG 1225
            +NPHAD+QAM RAHR+GQ+ ++++YRL+ R ++EER++Q+ KKK++L+ L V +    + 
Sbjct: 707  WNPHADLQAMARAHRLGQTNKVMIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNI 766

Query: 1226 SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDK 1285
            +Q+E++DI+R+G++ELF D     GK                                  
Sbjct: 767  NQEELDDIIRYGSKELFADENDEAGK---------------------------------- 792

Query: 1286 CTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW 1334
                S +I +D+ AI RLLDR  +    T L + + E+  L + K   +
Sbjct: 793  ----SRQIHYDDAAIQRLLDREQIGDEETSLDDEE-EDGFLKAFKVANF 836



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 8/78 (10%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQK-ND-------QLKPI 129
           C  C    NLL C++C   YH +CL PPLK      W+CP+C    ND       +++P 
Sbjct: 54  CQACGESENLLNCETCTYAYHPKCLLPPLKAPFPSNWRCPECVSPLNDIDKLLDTEMRPT 113

Query: 130 SNLDSISKRARSKIITIK 147
              DS + +  SK I +K
Sbjct: 114 VADDSDASKLGSKQIFVK 131


>gi|410925745|ref|XP_003976340.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Takifugu
            rubripes]
          Length = 1955

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 333/794 (41%), Positives = 452/794 (56%), Gaps = 112/794 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVINICDER-- 660
            EF  KW   S  H SW+ E QL++  +    NY+ K          +G    +   +R  
Sbjct: 581  EFFAKWCNMSYWHCSWVTELQLELHCQVMFRNYQRKNDMDEPPPIEFGEGEEDKSVKRKN 640

Query: 661  --------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK--LD 698
                                W    R+++    +       +KW  LPYD+ TWE   +D
Sbjct: 641  KDPMYAQLEENYLRFGIKMEWLMIHRILNHSIDRKNNVHYLIKWRDLPYDQATWEAEDMD 700

Query: 699  EPALE----KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQ--------SEIVALTE 746
             P  +    +Y +  +L +  E +  +K        RG+G   +           +    
Sbjct: 701  VPEFDVFKAQYWNHRELMMGEEGKPGRKIRL-----RGRGKRPERPPENPVIDPTIKFER 755

Query: 747  QPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QPE L   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +
Sbjct: 756  QPEYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHS 815

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PD 857
            K P LV  PLST+ NW  EF +WAP++ VV Y G   +RA+IR+ E+   D         
Sbjct: 816  KGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEDNAIRGGKKA 875

Query: 858  NLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSF 917
            +  KK +S KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN++  
Sbjct: 876  SRMKKDTSIKFHVLLTSYELITIDMAVLGSIDWACLVVDEAHRLKNNQSKFFRVLNNYPL 935

Query: 918  QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHM 977
            QH++LLTGTPLQNN+ E+++LLNFL P  F  L  F E+F D+    ++++L  ++ PHM
Sbjct: 936  QHKLLLTGTPLQNNLEELFHLLNFLTPERFSKLEIFLEEFADIAKEDQIKKLHDMLGPHM 995

Query: 978  LRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVM 1037
            LRRLK D  +++P KTE +V VELSS+Q +YY+ +LTKN++ L   G G  Q S+LN+VM
Sbjct: 996  LRRLKADVFKHMPSKTELIVRVELSSMQKKYYKFILTKNFEALNTKGGG-NQVSLLNVVM 1054

Query: 1038 QLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFS 1094
             L+K CNHPYL P      P   +  +      K+S KL LL  M++ L + GHRVLIFS
Sbjct: 1055 DLKKCCNHPYLFPAAAIEAPKMPNGMYDGSALTKSSGKLLLLQKMMRKLKEGGHRVLIFS 1114

Query: 1095 QMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGL 1153
            QMTK+LD+LED+L  E G K YER+DG ++ G RQ AI RFN   + +F FLLSTR+ GL
Sbjct: 1115 QMTKMLDLLEDFLENE-GYK-YERIDGGITGGMRQEAIDRFNAPGAQQFAFLLSTRAGGL 1172

Query: 1154 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKK 1213
            GINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V +ASVEERI Q+AKKK
Sbjct: 1173 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKK 1232

Query: 1214 LMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRD 1266
            +ML  L V     +K+G  S++E++DIL++GTE LF D      +  GEN          
Sbjct: 1233 MMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEALFKD------EGEGENK--------- 1277

Query: 1267 LEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDML 1326
                                 E S+ I +D+ AI RLLDR+     +TD  E    N+ L
Sbjct: 1278 --------------------EEDSSIIHYDDKAIDRLLDRNQ---DATDDTELQSMNEYL 1314

Query: 1327 GSVKATEWNEETTE 1340
             S K  ++ EE  +
Sbjct: 1315 SSFKVAQYVEEEVQ 1328



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCDSCP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 484 DDHHMEFCRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRCT 533



 Score = 70.5 bits (171), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P G W CP C ++  Q
Sbjct: 405 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCEKEGIQ 462


>gi|395748521|ref|XP_002827042.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 3 [Pongo abelii]
          Length = 1993

 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 339/808 (41%), Positives = 457/808 (56%), Gaps = 121/808 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVL----AKRKLENYKA----- 647
            P V     ++G++   EF VKWVG S  H SW  E Q+++     +K++  NY+      
Sbjct: 520  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQMEIFHWFVSKQQRRNYRVDPPPX 578

Query: 648  --------------------------KYGTTVINICDERWKQPQRVISLRSSKDGTREAF 681
                                      KY    I      W    R+I+    K G     
Sbjct: 579  EYESGEDDGKSDKRKVKDPHYAEMEEKYYRFGIK---PEWMTVHRIINHSVDKKGNYHYL 635

Query: 682  VKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------K 733
            VKW  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +
Sbjct: 636  VKWRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQ 691

Query: 734  GDCQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLG 786
            GD   S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLG
Sbjct: 692  GDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLG 751

Query: 787  KTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAII 846
            KT+    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAII
Sbjct: 752  KTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAII 811

Query: 847  RQYEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            R+ E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE
Sbjct: 812  RENEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDE 869

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F
Sbjct: 870  AHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF 929

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             D++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N+
Sbjct: 930  ADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF 989

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLT 1074
            + L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL 
Sbjct: 990  EALNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLM 1048

Query: 1075 LLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITR 1134
            LL  ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI R
Sbjct: 1049 LLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDR 1106

Query: 1135 FNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            FN   + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++
Sbjct: 1107 FNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMI 1166

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSP 1246
            YR V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D  
Sbjct: 1167 YRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD-- 1224

Query: 1247 GINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDR 1306
                ++ GEN                               E S+ I +D  AIARLLDR
Sbjct: 1225 ----ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDR 1251

Query: 1307 SNLQSGSTDLAEGDLENDMLGSVKATEW 1334
            +   +  TD+      N+ L S K  ++
Sbjct: 1252 NQDATEDTDVQN---MNEYLSSFKVAQY 1276



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 439 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 487



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 358 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 415


>gi|344290176|ref|XP_003416814.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Loxodonta
            africana]
          Length = 1863

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 336/787 (42%), Positives = 450/787 (57%), Gaps = 109/787 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 455  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 514

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 515  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEE-DE 573

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQPE 749
              + +Y      + +     + +D ++    + K    Q++           V    QP 
Sbjct: 574  MNIPEYEDHKQSYWRHRELIMGEDPAQPRKYKKKKKEVQTDGPPSSPTNDPTVKYETQPR 633

Query: 750  ELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLP 807
             +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   K P
Sbjct: 634  FITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGP 693

Query: 808  CLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL-------- 859
             LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN         
Sbjct: 694  FLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGKKAF 751

Query: 860  -NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQ 918
              K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +   
Sbjct: 752  KMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKID 811

Query: 919  HRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHML 978
            H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ PHML
Sbjct: 812  HKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHML 871

Query: 979  RRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQ 1038
            RRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M 
Sbjct: 872  RRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNIMMD 930

Query: 1039 LRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQ 1095
            L+K CNHPYL P      P   S  +     IKAS KL LL  ML+ L ++GHRVLIFSQ
Sbjct: 931  LKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQ 990

Query: 1096 MTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLG 1154
            MTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLG
Sbjct: 991  MTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1048

Query: 1155 INLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKL 1214
            INLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK+K+
Sbjct: 1049 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1108

Query: 1215 MLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDL 1267
            ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN           
Sbjct: 1109 MLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK---------- 1152

Query: 1268 EQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLG 1327
                                E S+ I +D  AIARLLDR+   +  TD+      N+ L 
Sbjct: 1153 -------------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNEYLS 1190

Query: 1328 SVKATEW 1334
            S K  ++
Sbjct: 1191 SFKVAQY 1197



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 359 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 407



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 278 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 335


>gi|410905767|ref|XP_003966363.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Takifugu
            rubripes]
          Length = 1967

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 326/784 (41%), Positives = 450/784 (57%), Gaps = 102/784 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------------------------ 648
            EF VKW   S  H SW+ E QL++  +    NY+ K                        
Sbjct: 559  EFFVKWCNMSYWHCSWVLELQLELNCQVMFRNYQRKTDMDEPPPVDFGGEGDDDKSSKRK 618

Query: 649  -----YGTTVINIC----DERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD- 698
                 +      IC       W    RV++    K       +KW  LPYD+ TWE  D 
Sbjct: 619  NKDPLFARMEEEICRYGVKMEWLMIHRVLNHSVDKKNNVHYLIKWRDLPYDQSTWESEDM 678

Query: 699  -----EPALEKYSHLTDLFVQFERQ---TLKKDASEDELPRGKGDCQQSEIVALTEQPEE 750
                 +P  + Y +  +L V  E +    LKK     +  R   +      +    QP+ 
Sbjct: 679  DIPEYDPYKQTYWNHRELMVGEEGRPGKKLKKTVKVKKAERPPANPVVDPTIKFDRQPDY 738

Query: 751  L--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPC 808
            L   GG L P+QLE LNWLR  W ++ + ILADEMGLGKTV    F+ SLY E  +K P 
Sbjct: 739  LDSTGGTLHPYQLEGLNWLRFSWAQATDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPF 798

Query: 809  LVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEW-------HASDPDNLNK 861
            LV  PLST+ NW  EF +WAP++ VV Y G   +RA+IR+ E+             +  K
Sbjct: 799  LVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEGNAIRGGKKASKMK 858

Query: 862  KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRV 921
            K S+ KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN++  QH++
Sbjct: 859  KDSTVKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNNYQLQHKL 918

Query: 922  LLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRL 981
            LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLRRL
Sbjct: 919  LLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRL 978

Query: 982  KKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRK 1041
            K D  +++P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L+K
Sbjct: 979  KADVFKHMPSKTELIVRVELSPMQKKYYKFILTRNFEALNTRGGG-NQVSLLNVVMDLKK 1037

Query: 1042 VCNHPYLIPGTEPDSGSVE---FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTK 1098
             CNHPYL P    ++  +    +     +K+S KL LL  M++ L + GHRVL+FSQMTK
Sbjct: 1038 CCNHPYLFPAAATEAAKLPNGMYEGNSLVKSSGKLMLLQKMMRKLKEGGHRVLVFSQMTK 1097

Query: 1099 LLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINL 1157
            +LD+LED+L  E G K YER+DG V+   RQ AI RFN   + +F FLLSTR+ GLGINL
Sbjct: 1098 MLDLLEDFLENE-GYK-YERIDGGVTGNMRQEAIDRFNAPGAPQFAFLLSTRAGGLGINL 1155

Query: 1158 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD 1217
            A+ADTVIIYDSD+NPH DIQA +RAHRIGQ++++++YR V +ASVEERI Q+AKKK+ML 
Sbjct: 1156 ASADTVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTKASVEERITQVAKKKMMLT 1215

Query: 1218 QLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQK 1270
             L V     +K+G  S++E++DIL++GTEELF D   I   D  E+++S+          
Sbjct: 1216 HLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDE--IGDGDNKEDDSSV---------- 1263

Query: 1271 HRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVK 1330
                                  I +D++AI RLLDR+   +  T+L      N+ L S K
Sbjct: 1264 ----------------------IHYDDHAIDRLLDRNQDATEDTELQS---MNEYLSSFK 1298

Query: 1331 ATEW 1334
              ++
Sbjct: 1299 VAQY 1302



 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 36/49 (73%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+C
Sbjct: 462 DDHHIEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWICPRC 510



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 378 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 435


>gi|302796603|ref|XP_002980063.1| hypothetical protein SELMODRAFT_177985 [Selaginella moellendorffii]
 gi|300152290|gb|EFJ18933.1| hypothetical protein SELMODRAFT_177985 [Selaginella moellendorffii]
          Length = 1274

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 315/739 (42%), Positives = 449/739 (60%), Gaps = 80/739 (10%)

Query: 593  RVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKR------KLENYK 646
            +++ P  +E A V  ++  + +LVKW  KS +H SW+ ++ L    K       +L N+ 
Sbjct: 106  QIRPPEPSEDAGVAEESTKH-YLVKWKSKSYMHCSWVTQAALDKAIKSYPGIRLRLMNFN 164

Query: 647  AKYGTTVINI-----CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
             +    + +          W    R+I  R  + G  E  VKW  L Y+ECTWE  D+  
Sbjct: 165  RQSELKLEDEEEKVPVKPEWTTVDRIIDYRK-RSGKDEFLVKWKELGYEECTWETEDDI- 222

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ-QSEIVALTEQPEELKGGALFPHQ 760
                     +  Q E +  K  ++ +E      D + Q       + PE + GG L P+Q
Sbjct: 223  ---------VAFQAEIKRYKAASTNEEYQDVDHDKRRQKAFTPYDKTPEFVVGGVLHPYQ 273

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            LE LN+LR  W + K VILADEMGLGKT+   +F++SL  E    LP L++ PLST+ NW
Sbjct: 274  LEGLNFLRYAWQQGKPVILADEMGLGKTIQTISFLTSLLHE-GVSLPHLIVAPLSTLRNW 332

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWH---ASDPDNLNKKTSS---YKFNVLLTT 874
              EF++WAP +++V Y G A+AR IIRQ E+       P+   K  S     KFNVLLT+
Sbjct: 333  EREFSIWAPQMSIVTYIGSAQAREIIRQKEFFLPKERKPEKGKKNASRQRRVKFNVLLTS 392

Query: 875  YEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGE 934
            YEM+  DS+ L+ + WE L+VDEGHRLKN  SKLF  L+++S   RVLLTGTPLQNN+ E
Sbjct: 393  YEMVNTDSAVLKPIKWECLIVDEGHRLKNKDSKLFQTLHNYSTYSRVLLTGTPLQNNLDE 452

Query: 935  MYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTE 994
            ++ L+ FL  + F SL  F+ +F D+   ++V+ L  +++ H+LRR+KKD ++ +PPK E
Sbjct: 453  LFTLMYFLDSSKFSSLEEFQLEFKDINHEEQVQRLHTMLSSHLLRRVKKDVLKELPPKKE 512

Query: 995  RMVPVELSSIQAEYYRAMLTKNYQIL-RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE 1053
             +V VELS+IQ +YYRA+LT+NY++L R+ G    Q S+ N+VM+LRK+C HP+L+ G E
Sbjct: 513  LIVRVELSAIQKDYYRAVLTRNYEVLSRHSG---VQVSLNNLVMELRKICAHPFLLDGVE 569

Query: 1054 PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
             ++   + + +  ++AS KL LL  M   L  EGHRVLI+SQ  ++LDILED+L   +  
Sbjct: 570  EETEDEDAVQKTLVEASGKLLLLDKMTTKLKAEGHRVLIYSQFQRVLDILEDWL--AYKN 627

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              YER+DG VS  DRQ+ I RFN   S+ F FLLSTR+ GLGINLATADTV+IYDSD+NP
Sbjct: 628  WNYERIDGKVSGADRQSRIDRFNAPGSKIFCFLLSTRAGGLGINLATADTVVIYDSDWNP 687

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS----QK 1228
            HAD+QAM RAHR+GQ+ ++++YRL+ R ++EER++QL+KKK++L+ L V +  +    Q+
Sbjct: 688  HADMQAMARAHRMGQTSKVMIYRLITRGTIEERMMQLSKKKMVLEHLVVGRMKTQILNQE 747

Query: 1229 EVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTE 1288
            E++DILR+G +ELF D              + EEA   L Q H                 
Sbjct: 748  ELDDILRYGAKELFADE-------------TAEEA--KLRQIH----------------- 775

Query: 1289 GSTKIVWDENAIARLLDRS 1307
                  +D++AI RLLDRS
Sbjct: 776  ------YDDSAIDRLLDRS 788



 Score = 80.1 bits (196), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 6/58 (10%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSI 135
           C +C LGG LLCCD+C   YHL+CLDPP+K +P G W C KC +      P+++L+ I
Sbjct: 51  CSVCSLGGKLLCCDTCTAVYHLECLDPPMKSVPKGDWSCLKCRE------PLADLEKI 102


>gi|332250910|ref|XP_003274592.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 3 [Nomascus leucogenys]
          Length = 1985

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 340/806 (42%), Positives = 457/806 (56%), Gaps = 116/806 (14%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPPPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRE 828

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 829  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 886

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 887  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 946

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 947  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 1006

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 1007 LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1065

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+ + E G K YER+DG ++   RQ AI RFN
Sbjct: 1066 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFXDYE-GYK-YERIDGGITGALRQEAIDRFN 1123

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1124 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1183

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1184 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1239

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1240 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1268

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1269 DATEDTDVQN---MNEYLSSFKVAQY 1291



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.6 bits (179), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|410919217|ref|XP_003973081.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 5-like [Takifugu rubripes]
          Length = 1982

 Score =  551 bits (1419), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 339/802 (42%), Positives = 468/802 (58%), Gaps = 95/802 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVINICDER-- 660
            EF VKW G S  H SW+ E QL++       NY+ K          YG+    +  E+  
Sbjct: 495  EFFVKWAGLSYWHCSWVSELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEDELNSEKRK 554

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE--KL 697
                                 W    R+++    KDG     +KW  +PYD+CTWE  + 
Sbjct: 555  PIDAQYAMMEERFYRYGIKPEWMVIHRILNHSFDKDGDVHYLIKWRDMPYDQCTWEMDEF 614

Query: 698  DEPALEK-----YSHLTDLFVQFER-------QTLKKDASEDELPRGKGDCQQSEIVALT 745
            D P  E+     + H   +  + +R       Q LK+   + E+P        +  +   
Sbjct: 615  DIPDYERHKASYWDHREQILGEDQRPLMVLEGQKLKECHPKKEIPPDAPIIDPT--IKFE 672

Query: 746  EQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFK 803
             QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  
Sbjct: 673  HQPWYINATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGH 732

Query: 804  AKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN--- 860
            +K P LV  PLST+ NW  EF +WAP+  VV Y G   +RAIIR+ E+   D    +   
Sbjct: 733  SKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAIIRENEFTFEDSAVKSGRK 792

Query: 861  ----KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFS 916
                KK +  KF++LLT+YE+I  D + L  V W  LVVDE HRLKN+ SK F +LN + 
Sbjct: 793  VFRMKKDTPIKFHILLTSYELITIDQAILGSVTWACLVVDEAHRLKNNQSKFFRILNGYK 852

Query: 917  FQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPH 976
              +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  ++ PH
Sbjct: 853  IYYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDVLGPH 912

Query: 977  MLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIV 1036
            MLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+
Sbjct: 913  MLRRLKVDVFKNMPAKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGG-NQVSLLNIM 971

Query: 1037 MQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIF 1093
            M L+K CNHPYL P      P   +  +   + +K+S KLTLL  MLK L  EGHRVLIF
Sbjct: 972  MDLKKCCNHPYLFPVAAVEAPMLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIF 1031

Query: 1094 SQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCG 1152
            SQMTK+LD+LED+L  EF    YER+DG ++   RQ AI RFN   + +F FLLSTR+ G
Sbjct: 1032 SQMTKMLDLLEDFL--EFEGYKYERIDGGITGSLRQEAIDRFNAPGAQQFCFLLSTRAGG 1089

Query: 1153 LGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKK 1212
            LGINLA+ADTVIIYDSD+NPH DIQA +RAHRIGQ++++++YR V R SVEERI Q+AK+
Sbjct: 1090 LGINLASADTVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTRGSVEERITQVAKR 1149

Query: 1213 KLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
            K+ML  L V     +K+G  S++E++DIL++GTEELF D      + MG +  SI   + 
Sbjct: 1150 KMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEMEA-ARAMGMSEQSISTLIG 1208

Query: 1266 DLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDM 1325
            D       + G  G+V           I +D++AI++LLDRS   +  T++      N+ 
Sbjct: 1209 D------NKDGEEGNV-----------IHYDDDAISKLLDRSQDATEDTEIQN---MNEY 1248

Query: 1326 LGSVKATEW--NEETTEDQAES 1345
            L S K  ++   EE  E +AE+
Sbjct: 1249 LSSFKVAQYVVKEEEGEVRAET 1270



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 26/42 (61%), Positives = 33/42 (78%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+C
Sbjct: 404 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 445



 Score = 71.2 bits (173), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 4/62 (6%)

Query: 68  KKGNDGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKN 123
           ++  DGY  +    C +C  GG ++ CD+CPR YHL CL+P L++ P GKW CP C ++ 
Sbjct: 318 REDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELEKAPEGKWSCPHCEKEG 377

Query: 124 DQ 125
            Q
Sbjct: 378 IQ 379


>gi|302811536|ref|XP_002987457.1| hypothetical protein SELMODRAFT_158748 [Selaginella moellendorffii]
 gi|300144863|gb|EFJ11544.1| hypothetical protein SELMODRAFT_158748 [Selaginella moellendorffii]
          Length = 1292

 Score =  550 bits (1418), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 314/739 (42%), Positives = 448/739 (60%), Gaps = 80/739 (10%)

Query: 593  RVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKR------KLENYK 646
            +++ P  +E   V  ++  + +LVKW  KS +H SW+ ++ L    K       +L N+ 
Sbjct: 106  QIRPPEPSEDGGVAEESTKH-YLVKWKSKSYMHCSWVTQAALDKAIKSYPGIRLRLMNFN 164

Query: 647  AKYGTTVINI-----CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
             +    + +          W    R+I  R  + G  E  VKW  L Y+ECTWE  D+  
Sbjct: 165  RQSELKLEDEEEKVPVKPEWTTVDRIIDYRK-RSGKDEFLVKWKELGYEECTWETEDDI- 222

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ-QSEIVALTEQPEELKGGALFPHQ 760
                     +  Q E +  K  ++ +E      D + Q       + PE + GG L P+Q
Sbjct: 223  ---------VAFQAEIKRYKAASTNEEYQDVDHDKRRQKAFTPYDKTPEFVVGGVLHPYQ 273

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            LE LN+LR  W + K VILADEMGLGKT+   +F++SL  E    LP L++ PLST+ NW
Sbjct: 274  LEGLNFLRYAWQQGKPVILADEMGLGKTIQTISFLTSLLHE-GVSLPHLIVAPLSTLRNW 332

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD---PDNLNKKTSS---YKFNVLLTT 874
              EF++WAP +++V Y G A+AR IIRQ E+       P+   K  S     KFNVLLT+
Sbjct: 333  EREFSIWAPQMSIVTYIGSAQAREIIRQKEFFLPKERKPEKGKKNASRQRRVKFNVLLTS 392

Query: 875  YEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGE 934
            YEM+  DS+ L+ + WE L+VDEGHRLKN  SKLF  L+++S   RVLLTGTPLQNN+ E
Sbjct: 393  YEMVNTDSAVLKPIKWECLIVDEGHRLKNKDSKLFQTLHNYSTYSRVLLTGTPLQNNLDE 452

Query: 935  MYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTE 994
            ++ L+ FL  + F SL  F+ +F D+   ++V+ L  +++ H+LRR+KKD ++ +PPK E
Sbjct: 453  LFTLMYFLDSSKFSSLEEFQLEFKDINHEEQVQRLHTMLSSHLLRRVKKDVLKELPPKKE 512

Query: 995  RMVPVELSSIQAEYYRAMLTKNYQIL-RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE 1053
             +V VELS+IQ +YYRA+LT+NY++L R+ G    Q S+ N+VM+LRK+C HP+L+ G E
Sbjct: 513  LIVRVELSAIQKDYYRAVLTRNYEVLSRHSG---VQVSLNNLVMELRKICAHPFLLDGVE 569

Query: 1054 PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
             ++   + + +  ++AS KL LL  M   L  EGHRVLI+SQ  ++LDILED+L   +  
Sbjct: 570  EETEDEDAVQKTLVEASGKLLLLDKMTTKLKAEGHRVLIYSQFQRVLDILEDWL--AYKN 627

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              YER+DG VS  DRQ+ I RFN   S+ F FLLSTR+ GLGINLATADTV+IYDSD+NP
Sbjct: 628  WNYERIDGKVSGADRQSRIDRFNAPGSKIFCFLLSTRAGGLGINLATADTVVIYDSDWNP 687

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS----QK 1228
            HAD+QAM RAHR+GQ+ ++++YRL+ R ++EER++QL+KKK++L+ L V +  +    Q+
Sbjct: 688  HADMQAMARAHRMGQTSKVMIYRLITRGTIEERMMQLSKKKMVLEHLVVGRMKTQILNQE 747

Query: 1229 EVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTE 1288
            E++DILR+G +ELF D              + EEA   L Q H                 
Sbjct: 748  ELDDILRYGAKELFADE-------------TAEEA--KLRQIH----------------- 775

Query: 1289 GSTKIVWDENAIARLLDRS 1307
                  +D++AI RLLDRS
Sbjct: 776  ------YDDSAIDRLLDRS 788



 Score = 80.1 bits (196), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 6/58 (10%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSI 135
           C +C LGG LLCCD+C   YHL+CLDPP+K +P G W C KC +      P+++L+ I
Sbjct: 51  CSVCSLGGKLLCCDTCTAVYHLECLDPPMKSVPKGDWSCLKCRE------PLADLEKI 102


>gi|189521245|ref|XP_696641.3| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Danio rerio]
          Length = 2063

 Score =  550 bits (1418), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 324/784 (41%), Positives = 450/784 (57%), Gaps = 104/784 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            EF VK   +S  H +WI E QL++       NY+ K          YG+           
Sbjct: 565  EFFVKLTAQSYWHCTWITELQLEIFHSVMFRNYQRKTDMDEPPSLDYGSGGEEDSGKSEK 624

Query: 652  -----TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKL 697
                     I +E+         W    R+I+    K G     VKW  L YD+CTWE+ 
Sbjct: 625  RRAKDPQYAILEEKYYRYGIKPEWMMVHRIINHSVDKKGNYHYLVKWRDLTYDQCTWER- 683

Query: 698  DEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE-------IVALTEQPEE 750
            DE  + +++     + +     +K+D  +    R + +  ++         +   EQPE 
Sbjct: 684  DELDIPEFALHKTAYWRHREAVMKEDPEKPRKMRRREENDEAPSTPVNDPTIKYEEQPEF 743

Query: 751  LK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPC 808
            +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SL+ E   K P 
Sbjct: 744  VTETGGTLHLYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLFKEGHTKGPF 803

Query: 809  LVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN-------K 861
            LV  PLST+ NW  EF +WAP+  VV Y G   +RAIIR+ E+   D            +
Sbjct: 804  LVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAIIRENEFTFDDTAVKGGKKAFKLR 863

Query: 862  KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRV 921
            + +  KF+VLLT+YE++  D + L+ + W  LVVDE HRLKN+ SK F  LN +   H++
Sbjct: 864  REAPIKFHVLLTSYELVTIDQNVLKSIDWACLVVDEAHRLKNNQSKFFRRLNDYKIDHKL 923

Query: 922  LLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRL 981
            LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ PHMLRRL
Sbjct: 924  LLTGTPLQNNLEELFHLLNFLTPNRFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRL 983

Query: 982  KKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRK 1041
            K D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M L+K
Sbjct: 984  KADVFKNMPAKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGG-NQVSLLNIMMDLKK 1042

Query: 1042 VCNHPYLIP---GTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTK 1098
             CNHPYL P      P + S  +      KAS KL LL  ML+ L ++GHRVL+FSQMTK
Sbjct: 1043 CCNHPYLFPVAAAEAPKTPSGAYEGVGLTKASGKLMLLQKMLRKLKEQGHRVLVFSQMTK 1102

Query: 1099 LLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINL 1157
            +LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGINL
Sbjct: 1103 MLDLLEDFLDSE-GYK-YERIDGGITGALRQEAIDRFNAPGAVQFCFLLSTRAGGLGINL 1160

Query: 1158 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD 1217
            ATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK+K+ML 
Sbjct: 1161 ATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLT 1220

Query: 1218 QLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQK 1270
             L V     +K+G  S++E++DIL++GTEELF D   I G D  +++ S+          
Sbjct: 1221 HLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDE--IEG-DNKDDDMSV---------- 1267

Query: 1271 HRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVK 1330
                                  I +D  AI RLLDRS   +  +D+      N+ L S K
Sbjct: 1268 ----------------------IHYDNAAIERLLDRSQDATDDSDMQN---MNEYLSSFK 1302

Query: 1331 ATEW 1334
              ++
Sbjct: 1303 VAQY 1306



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSCP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 475 CRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWLCPRCT 517



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 10/73 (13%)

Query: 63  RSSTKKK----GNDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNG 112
           R + KKK      DG  YE      C +C  GG ++ CD+CPR YHL CL+P L++ P G
Sbjct: 365 RPAKKKKKALGDEDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELEKAPEG 424

Query: 113 KWQCPKCTQKNDQ 125
           KW CP C ++  Q
Sbjct: 425 KWSCPHCEKEGIQ 437


>gi|148227774|ref|NP_001080504.1| chromodomain helicase DNA binding protein 4 [Xenopus laevis]
 gi|28422180|gb|AAH46866.1| B230399n07 protein [Xenopus laevis]
          Length = 1893

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 328/787 (41%), Positives = 446/787 (56%), Gaps = 107/787 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVINICDER-- 660
            EF VKW   S +H SW+ E QL++  +    NY+ K          YG        +R  
Sbjct: 532  EFFVKWHAMSYLHCSWVTELQLELHCQVMFRNYQRKNDMDEPPAGDYGVDEEEKSRKRKN 591

Query: 661  --------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEP 700
                                W    RV++    K G     +KW  L YD+ +WE  +E 
Sbjct: 592  KDPKYLEMEEKFYRYGIKPEWMMIHRVLNHSVDKKGYVHYLIKWRDLAYDQASWEA-EES 650

Query: 701  ALEKYSHLTDLFVQFERQTLKKDASEDELP-------------RGKGDCQQSEIVALTEQ 747
             ++ Y    D++ Q      +    ++  P             R          V    Q
Sbjct: 651  DIQDY----DIYKQGYWNHRELMCGDEGRPGKKVKKVKLRKLDRPPDTPAVDPTVKYDRQ 706

Query: 748  PEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAK 805
            P+ L   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K
Sbjct: 707  PDYLDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSK 766

Query: 806  LPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEW-------HASDPDN 858
             P LV  PLST+ NW  EF +WAP++ VV Y G   +RA+IR+ E+             +
Sbjct: 767  GPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEGNAIRGGKKAS 826

Query: 859  LNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQ 918
              KK +S KF+VLLT+YE+I  D++ L  + W  LVVDE HRLKN+ SK F +LN +  Q
Sbjct: 827  RMKKEASVKFHVLLTSYELITIDTAVLGSIDWACLVVDEAHRLKNNQSKFFRVLNGYPLQ 886

Query: 919  HRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHML 978
            H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHML
Sbjct: 887  HKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQIKKLHDMLGPHML 946

Query: 979  RRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQ 1038
            RRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM 
Sbjct: 947  RRLKADVFKNMPSKTELIVRVELSPMQKKYYKFILTRNFEALNTRGGG-NQVSLLNVVMD 1005

Query: 1039 LRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQ 1095
            L+K CNHPYL P      P   +  +     IK + KL LL  ML+ L  +GHRVLIFSQ
Sbjct: 1006 LKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIKGAGKLFLLQKMLRKLKDDGHRVLIFSQ 1065

Query: 1096 MTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLG 1154
            MTK+LD+LED++  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLG
Sbjct: 1066 MTKMLDLLEDFMEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1123

Query: 1155 INLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKL 1214
            INLATADTV+IYDSD+NPH DIQA +RAHRIGQ++++++YR V RASVEERI Q+AKKK+
Sbjct: 1124 INLATADTVVIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTRASVEERITQVAKKKM 1183

Query: 1215 MLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDL 1267
            ML  L V     +K+G  S++E++DIL++GTEELF D       + GEN           
Sbjct: 1184 MLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDE----ATEGGEN----------- 1228

Query: 1268 EQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLG 1327
                             K  E  + I +D+ AIARLLDR+  ++   +L  G   N+ L 
Sbjct: 1229 -----------------KEGEDISVIHYDDKAIARLLDRNQDETEEPELQLG--MNEYLS 1269

Query: 1328 SVKATEW 1334
            S K  ++
Sbjct: 1270 SFKVAQY 1276



 Score = 80.5 bits (197), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 33/43 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 442 CRVCKDGGELLCCDVCPSSYHIHCLNPPLPEIPNGEWLCPRCT 484



 Score = 70.9 bits (172), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 32/48 (66%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           C +C  GG ++ CD+CPR YH+ CLDP + + P GKW CP C ++  Q
Sbjct: 364 CEVCQQGGEIILCDTCPRAYHMVCLDPDMDKAPEGKWSCPHCEKEGVQ 411


>gi|348526369|ref|XP_003450692.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like
            [Oreochromis niloticus]
          Length = 1972

 Score =  547 bits (1410), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 328/784 (41%), Positives = 447/784 (57%), Gaps = 102/784 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYK----------AKYG------------ 650
            EF VKW   S  H SW+ E QL++  +    NY+          A +G            
Sbjct: 560  EFFVKWCNMSYWHCSWVQELQLELNCQVMFRNYQRKTDMDEPPPADFGGEGDDDKSTKRK 619

Query: 651  ---TTVINICDE--------RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK--L 697
                  +++ +E         W    RV++    K       +KW  LPYD+ TWE   +
Sbjct: 620  NKDPLFVHMEEEFCRYGVKMEWLMIHRVLNHSVDKKNNVHYLIKWRDLPYDQSTWESEDM 679

Query: 698  DEPALEKYSHLT----DLFVQFERQ---TLKKDASEDELPRGKGDCQQSEIVALTEQPEE 750
            D P  + Y        +L +  E +    LKK     +  R   +      +    QP+ 
Sbjct: 680  DIPEYDTYKQTYWNHRELMMGEEGRPGKKLKKTVKVKKAERPPANPVVDPTIKFDRQPDY 739

Query: 751  L--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPC 808
            L   GG L P+QLE LNWLR  W ++ + ILADEMGLGKTV    F+ SLY E  +K P 
Sbjct: 740  LDSTGGTLHPYQLEGLNWLRFSWAQATDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPF 799

Query: 809  LVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEW-------HASDPDNLNK 861
            LV  PLST+ NW  EF +WAP++ VV Y G   +RA+IR+ E+             +  K
Sbjct: 800  LVSAPLSTIINWEREFEMWAPDMYVVTYIGDKDSRAVIRENEFSFEGNAIRGGKKASKMK 859

Query: 862  KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRV 921
            K S  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN++  QH++
Sbjct: 860  KDSPVKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNNYPLQHKL 919

Query: 922  LLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRL 981
            LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLRRL
Sbjct: 920  LLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRL 979

Query: 982  KKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRK 1041
            K D  +++P KTE +V VELSS+Q +YY+ +LT+N++ L   G G  Q S+LN+VM L+K
Sbjct: 980  KADVFKHMPSKTELIVRVELSSMQKKYYKFILTRNFEALNTRGGG-NQVSLLNVVMDLKK 1038

Query: 1042 VCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTK 1098
             CNHPYL P      P   +  +      KAS KL LL  M++ L + GHRVL+FSQMTK
Sbjct: 1039 CCNHPYLFPAAANEAPKLPNGMYEGTSLTKASGKLMLLQKMMRRLKEGGHRVLVFSQMTK 1098

Query: 1099 LLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINL 1157
            +LD+LED+L  E G K YER+DG V+   RQ AI RFN   + +F FLLSTR+ GLGINL
Sbjct: 1099 MLDLLEDFLENE-GYK-YERIDGGVTGNLRQEAIDRFNAPGAQQFAFLLSTRAGGLGINL 1156

Query: 1158 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD 1217
            A+ADTVIIYDSD+NPH DIQA +RAHRIGQ++++++YR V +ASVEERI Q+AKKK+ML 
Sbjct: 1157 ASADTVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTKASVEERITQVAKKKMMLT 1216

Query: 1218 QLFVNK-------SGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQK 1270
             L V         S S++E++DIL++GTEELF D  G    D  E+++S+          
Sbjct: 1217 HLVVRPGLGSKMGSMSKQELDDILKFGTEELFKDEVGDG--DNKEDDSSV---------- 1264

Query: 1271 HRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVK 1330
                                  I +D+ AI RLLDR+     +TD  E    N+ L S K
Sbjct: 1265 ----------------------IHYDDQAIDRLLDRNQ---DATDDTELQSMNEYLSSFK 1299

Query: 1331 ATEW 1334
              ++
Sbjct: 1300 VAQY 1303



 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 36/49 (73%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+C
Sbjct: 463 DDHHIEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWICPRC 511



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLK 127
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q +
Sbjct: 379 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWE 438

Query: 128 PISNL 132
              +L
Sbjct: 439 ARDDL 443


>gi|242094948|ref|XP_002437964.1| hypothetical protein SORBIDRAFT_10g005630 [Sorghum bicolor]
 gi|241916187|gb|EER89331.1| hypothetical protein SORBIDRAFT_10g005630 [Sorghum bicolor]
          Length = 1147

 Score =  547 bits (1410), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 289/623 (46%), Positives = 411/623 (65%), Gaps = 56/623 (8%)

Query: 650  GTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD-----EPALEK 704
            G  ++ I  E W    R++S R +  G RE +VKW  L Y+ECTWE        +P +E+
Sbjct: 9    GEDIVAIRPE-WTTVDRILSSRKNSGGEREYYVKWNELTYEECTWENESDISAFQPEIER 67

Query: 705  YSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEAL 764
            ++      +Q  R+     A     PR              E P  L  G L P+QLE L
Sbjct: 68   FNE-----IQSRRKKSGDKAKATREPR-----------QFKESPTFLSCGTLHPYQLEGL 111

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL-PCLVLVPLSTMPNWLAE 823
            N+LR  W  +K VIL DEMGLGKT+ + AF++SL   F+ K  P LV+ PLST+ NW  E
Sbjct: 112  NFLRYSWFHNKRVILGDEMGLGKTIQSIAFLASL---FEDKFGPHLVVAPLSTLRNWERE 168

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWH------------ASDPDNLNKKTSSYKFNVL 871
            FA WAP +NVV Y G A +R IIR++E++             S P N  KK S  +F+VL
Sbjct: 169  FATWAPQMNVVMYFGAAASRDIIRKHEFYYPKEKLKKLKKKKSSPSNEEKKQSRIRFDVL 228

Query: 872  LTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNN 931
            LT+YEMI  DS+ L+ + WE L+VDEGHRLKN  SKLF  L  ++ +HRVLLTGTP+QNN
Sbjct: 229  LTSYEMINMDSNVLKNIEWECLIVDEGHRLKNKDSKLFGQLKDYNTKHRVLLTGTPVQNN 288

Query: 932  IGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPP 991
            + E++ L++FL+  SF S++  +E+F D+   +++E+L  ++ PH+LRR KKD M+ +PP
Sbjct: 289  LDELFMLMHFLEGESFGSITDLQEEFKDINQDKQIEKLHGMLKPHLLRRFKKDVMKELPP 348

Query: 992  KTERMVPVELSSIQAEYYRAMLTKNYQIL--RNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            K E ++ VEL+S Q EYY+A+LTKNY++L  RN G      S++N+VM+LRK+C H ++I
Sbjct: 349  KKELILRVELTSKQKEYYKAILTKNYEVLARRNGG----HTSLINVVMELRKLCCHGFMI 404

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P  EP +   E L  + + +S K+ LL  M+  L ++GHRVLI+SQ   +LD+LEDYL
Sbjct: 405  DEPDFEP-ANPEEGLRRL-LDSSGKMQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYL 462

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIY 1166
            +  +   +YER+DG +S  +RQ  I RFN ++ +RF FLLSTR+ GLGINLATADTVIIY
Sbjct: 463  S--YRKWSYERIDGKISGAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIY 520

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK--- 1223
            DSD+NPHAD+QAM RAHR+GQ+ ++++YRLV R ++EER++QL KKK++L+ L V +   
Sbjct: 521  DSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKILLEHLVVGRLTK 580

Query: 1224 --SGSQKEVEDILRWGTEELFND 1244
              + +Q+E++DI+R+G++ELF+D
Sbjct: 581  ASNVNQEELDDIIRYGSKELFDD 603


>gi|357125031|ref|XP_003564199.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like
            [Brachypodium distachyon]
          Length = 1334

 Score =  547 bits (1410), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 325/788 (41%), Positives = 470/788 (59%), Gaps = 86/788 (10%)

Query: 515  LREDDKDSDPVAVNGKVQDESAVSTEDLGERNDKMVVEDADVSLRDNEGLT-----VSEI 569
            L E D D  P+  NGK +D    +     ER D    EDA      NE L          
Sbjct: 20   LDESDDDLPPLGANGKGRDRPGDAPAQQIERED--AKEDACRKCGLNENLVSCSTCTYAF 77

Query: 570  HITCESTDKDVDVGKKTSGSVAKRVQE-------------PAVTESAQV--KGKAVSYEF 614
            H  C +   ++   K +       + E             P  T S++   K K V   +
Sbjct: 78   HRKCLTPCLNITSDKWSCPECVSPLTEMEKILDCETTNVVPGKTSSSESGSKNKPVK-RY 136

Query: 615  LVKWVGKSNIHNSWIPE------SQLKVLAKRKLENYKAKYGTTVINICDER-------W 661
            L+KW G S+IH +W+ E      +++    K +L N+   +    I+  D+        W
Sbjct: 137  LIKWKGLSHIHCTWVTEDEYLDAAKMHPRLKTRLNNFNKHFEP--IDKSDDDFAAIRPDW 194

Query: 662  KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK-----LDEPALEKYSHLTDLFVQFE 716
                RV+S R +  G RE +VKW  L YD+CTWE      + +P +E+++         E
Sbjct: 195  TTVDRVLSSRKNSIGEREYYVKWKELTYDDCTWENESDISVFQPQIERFN---------E 245

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKN 776
             Q+ +K + E      K      E+  +   PE L GG L P+QLE LN+LR  W  +K 
Sbjct: 246  IQSRRKKSIE------KSKSANREMRHVDGTPEFLSGGTLHPYQLEGLNFLRYSWSINKR 299

Query: 777  VILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
            VIL DEMGLGKT+ + AF++S+  +     P LV+ PLST+ NW  EFA WAP +NVV Y
Sbjct: 300  VILGDEMGLGKTIQSIAFLASVSEDNFG--PHLVVAPLSTLRNWEREFATWAPQMNVVMY 357

Query: 837  HGCAKARAIIRQYEWH------------ASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
             G + AR  IR+YE++             S   N  KK S  KF+VLLT+YEMI  DS+ 
Sbjct: 358  SGSSAARENIRKYEFYFPKDKPKKLKKKKSSSSNDEKKQSRIKFDVLLTSYEMINMDSAV 417

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L+ + WE ++VDEGHRLKN  SKLF LL  +  QHRVLLTGTP+QNN+ E++ L++FL+ 
Sbjct: 418  LKTIEWECMIVDEGHRLKNKDSKLFGLLKDYPTQHRVLLTGTPVQNNLDELFMLMHFLEG 477

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
             +F S++  +E+F D+   ++VE+L  ++ PH+LRR KKD M+++PPK E ++ VEL+S 
Sbjct: 478  ETFGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKDLPPKKELILRVELTSK 537

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVEFL 1062
            Q EYY+A+LTKNY +L   G G    S++N+VM+LRK+C H ++   P T+P+S   E L
Sbjct: 538  QKEYYKAILTKNYAVLSRRGGG--HVSLINVVMELRKLCCHGFMTDEPDTDPESPE-EGL 594

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              + +  S K+ LL  M+  L ++GHRVLI+SQ   +LD+LEDYL+  +   +YER+DG 
Sbjct: 595  RRL-LDCSGKMQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLS--YRNWSYERIDGK 651

Query: 1123 VSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +   +RQ  I RFN ++ ++F FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+QAM R
Sbjct: 652  IGGAERQIRIDRFNAKNSTKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMAR 711

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK-----SGSQKEVEDILRW 1236
            AHR+GQ+ ++++YRLV + ++EER++QL KKK++L+ L V +     + +Q+E++DI+R 
Sbjct: 712  AHRLGQTNKVMIYRLVCKGTIEERMMQLTKKKMVLEHLVVGRLTKASNVNQEELDDIIRH 771

Query: 1237 GTEELFND 1244
            G++ELF+D
Sbjct: 772  GSKELFDD 779



 Score = 47.4 bits (111), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 10/80 (12%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSISK 137
           C  C L  NL+ C +C   +H +CL P L  I + KW CP+C      + P++ ++ I  
Sbjct: 58  CRKCGLNENLVSCSTCTYAFHRKCLTPCLN-ITSDKWSCPEC------VSPLTEMEKILD 110

Query: 138 RARSKII---TIKSQSGVKS 154
              + ++   T  S+SG K+
Sbjct: 111 CETTNVVPGKTSSSESGSKN 130


>gi|292622418|ref|XP_685699.4| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 1
            [Danio rerio]
          Length = 1953

 Score =  544 bits (1402), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 336/786 (42%), Positives = 450/786 (57%), Gaps = 107/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------------------------ 648
            EF VKW  KS  H SW+ E QL++  +    NY+ K                        
Sbjct: 550  EFFVKWCNKSYWHCSWVQELQLELNCQVMFRNYQRKTDMEEPPNLEMGAEGDEDKSCKRK 609

Query: 649  ------------YGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK 696
                        YG   + I    W    R+++    K       +KW  LPYD+ TWE 
Sbjct: 610  NKDPFYARMEDKYGRFGVKI---EWLFIHRILNHSVDKKNNVHYLIKWRDLPYDQSTWES 666

Query: 697  --LDEPALEKY-----SHLTDLFVQFERQ-TLKKDASEDELPRGKGDCQQSEIVALTEQP 748
              +D P  E Y     +H   +  +  R     K     +  R   +      +    QP
Sbjct: 667  EDMDVPDFETYKQHYWNHRELMLGEEGRPGKKMKKVKVRKTERPPANPVVDPTIKFDRQP 726

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            + L   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 727  DYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 786

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RA+IR+ E+   D         + 
Sbjct: 787  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFTFEDNAIRGGKKASK 846

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK ++ KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN++  QH
Sbjct: 847  MKKEAAVKFHVLLTSYELITIDQAILGSIDWACLVVDEAHRLKNNQSKFFRVLNNYPLQH 906

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 907  KLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 966

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +++P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 967  RLKADVFKHMPSKTELIVRVELSPMQKKYYKYILTRNFEALNTRGGG-NQVSLLNVVMDL 1025

Query: 1040 RKVCNHPYLIP--GTE-PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P   TE P   +  +      KAS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1026 KKCCNHPYLFPTAATEAPKMPNGMYDGSALTKASGKLMLLFKMLKKLKEGGHRVLIFSQM 1085

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG V+ G RQ AI RFN   + +FVFLLSTR+ GLGI
Sbjct: 1086 TKMLDLLEDFLENE-GYK-YERIDGGVTGGMRQEAIDRFNAPGAPQFVFLLSTRAGGLGI 1143

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V +ASVEERI Q+AKKK+M
Sbjct: 1144 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKMM 1203

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTE+LF D       ++GE             
Sbjct: 1204 LTHLVVRPGLGSKAGSMSKQELDDILKFGTEQLFKD-------ELGEG------------ 1244

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           D   E S+ I +D+ AI RLLDR+   +  T+L      N+ L S
Sbjct: 1245 ---------------DNKEEDSSVIHYDDKAIDRLLDRNQDATEDTELQS---MNEYLSS 1286

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1287 FKVAQY 1292



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 27/42 (64%), Positives = 33/42 (78%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+C
Sbjct: 460 CRVCKDGGELLCCDTCPSSYHLHCLNPPLPDIPNGEWICPRC 501



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP ++R P G W CP C ++  Q
Sbjct: 368 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMERAPEGTWSCPHCEKEGIQ 425


>gi|431905346|gb|ELK10391.1| Chromodomain-helicase-DNA-binding protein 4 [Pteropus alecto]
          Length = 1854

 Score =  544 bits (1402), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 338/786 (43%), Positives = 454/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 484  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 543

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 544  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 602

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 603  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 658

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 659  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 718

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 719  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 778

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 779  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 838

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 839  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 898

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 899  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 957

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 958  KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1017

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1018 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1075

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1076 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1135

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1136 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1179

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L +G   N+ L S
Sbjct: 1180 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTEL-QG--MNEYLSS 1221

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1222 FKVAQY 1227



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|297261645|ref|XP_001107252.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like isoform 8
            [Macaca mulatta]
          Length = 1912

 Score =  544 bits (1401), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|194211609|ref|XP_001496418.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Equus
            caballus]
          Length = 1912

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|332838463|ref|XP_508960.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 4 isoform 3 [Pan troglodytes]
          Length = 1825

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 338/786 (43%), Positives = 454/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 455  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 514

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 515  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 573

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 574  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 629

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 630  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 689

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 690  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 749

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 750  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 809

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 810  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 869

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 870  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 928

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 929  KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 988

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 989  TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1046

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1047 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1106

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1107 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1150

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L +G   N+ L S
Sbjct: 1151 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTEL-QG--MNEYLSS 1192

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1193 FKVAQY 1198



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 4/52 (7%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C
Sbjct: 356 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 407


>gi|383415433|gb|AFH30930.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
 gi|384945022|gb|AFI36116.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
          Length = 1912

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|51599156|ref|NP_001264.2| chromodomain-helicase-DNA-binding protein 4 [Homo sapiens]
 gi|311033360|sp|Q14839.2|CHD4_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 4;
            Short=CHD-4; AltName: Full=ATP-dependent helicase CHD4;
            AltName: Full=Mi-2 autoantigen 218 kDa protein; AltName:
            Full=Mi2-beta
          Length = 1912

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 338/786 (43%), Positives = 454/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L +G   N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTEL-QG--MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|397499206|ref|XP_003820350.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 2 [Pan
            paniscus]
 gi|1107696|emb|CAA60384.1| Mi-2 protein [Homo sapiens]
 gi|119609184|gb|EAW88778.1| chromodomain helicase DNA binding protein 4, isoform CRA_b [Homo
            sapiens]
 gi|410227430|gb|JAA10934.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
 gi|410350195|gb|JAA41701.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
          Length = 1912

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 338/786 (43%), Positives = 454/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L +G   N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTEL-QG--MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|380809128|gb|AFE76439.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
 gi|383415429|gb|AFH30928.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
 gi|384945024|gb|AFI36117.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
          Length = 1905

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 535  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 594

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 595  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 653

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 654  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 709

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 710  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 769

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 770  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 829

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 830  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 889

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 890  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 949

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 950  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1008

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1009 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1068

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1069 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1126

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1127 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1186

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1187 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1230

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1231 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1272

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1273 FKVAQY 1278



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 438 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 356 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 413


>gi|384945020|gb|AFI36115.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
          Length = 1700

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 535  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 594

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 595  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 653

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 654  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 709

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 710  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 769

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 770  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 829

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 830  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 889

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 890  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 949

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 950  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1008

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1009 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1068

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1069 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1126

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1127 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1186

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1187 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1230

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1231 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1272

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1273 FKVAQY 1278



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 438 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 356 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 413


>gi|350584424|ref|XP_003126577.3| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Sus scrofa]
 gi|417515864|gb|JAA53737.1| chromodomain-helicase-DNA-binding protein 4 [Sus scrofa]
          Length = 1912

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|410301140|gb|JAA29170.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
          Length = 1914

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|119609183|gb|EAW88777.1| chromodomain helicase DNA binding protein 4, isoform CRA_a [Homo
            sapiens]
          Length = 1911

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|432860089|ref|XP_004069385.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Oryzias
            latipes]
          Length = 2111

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 336/826 (40%), Positives = 467/826 (56%), Gaps = 126/826 (15%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVINICDER-- 660
            EF VKW G S  H SW+ E QL++       NY+ K          YG+    I +E+  
Sbjct: 670  EFFVKWAGLSYWHCSWVSELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEEINNEKRK 729

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+++    +DG     +KW  LPYD+CTWE +D+
Sbjct: 730  SKDPQYAVMEERFYRYGIKPEWMVMHRILNHSFDRDGDVHYLIKWRDLPYDQCTWE-VDD 788

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKG---DCQQSE----------IVALTE 746
              + +Y      +     Q L +D     + +GK    + Q+ E           +    
Sbjct: 789  FDVPEYDSHKACYWDHREQILGEDQRPLVVRKGKKLREEHQKREAPPDAPIIDPTIKFEH 848

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +
Sbjct: 849  QPWYINATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHS 908

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTS 864
            K P LV  PLST+ NW  EF +WAP+  VV Y G                  D  ++K +
Sbjct: 909  KGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTG------------------DKDSRKDT 950

Query: 865  SYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLT 924
              KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +   +++LLT
Sbjct: 951  PIKFHVLLTSYELITIDQAILGSISWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLT 1010

Query: 925  GTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKD 984
            GTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ PHMLRRLK D
Sbjct: 1011 GTPLQNNLEELFHLLNFLTPDRFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKAD 1070

Query: 985  AMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCN 1044
              +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M L+K CN
Sbjct: 1071 VFKNMPAKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGG-NQVSLLNIMMDLKKCCN 1129

Query: 1045 HPYLIPGTE---PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLD 1101
            HPYL P      P   +  +   + +K+S KLTLL  MLK L  EGHRVLIFSQMTK+LD
Sbjct: 1130 HPYLFPVAAVEAPVLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLD 1189

Query: 1102 ILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATA 1160
            +LED+L  EF    YER+DG ++ G RQ AI RFN   ++ F FLLSTR+ GLGINLA+A
Sbjct: 1190 LLEDFL--EFEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASA 1247

Query: 1161 DTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF 1220
            DTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V R SVEERI Q+AK+K+ML  L 
Sbjct: 1248 DTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMMLTHLV 1307

Query: 1221 V-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRK 1273
            V     +K+GS  ++E++DIL++GTEELF D      + MG+N    E +V         
Sbjct: 1308 VRPGLGSKTGSMSKQELDDILKFGTEELFKDEMEA-ARTMGDNKDGEEGSV--------- 1357

Query: 1274 RGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATE 1333
                               I +D++AI++LLDRS   +  TD+      N+ L S K  +
Sbjct: 1358 -------------------IHYDDDAISKLLDRSQDATEDTDIQN---MNEYLSSFKVAQ 1395

Query: 1334 WNEETTEDQAESPVAAVDDASAENSERKEENAVTGIEENEWDRLLR 1379
            +  +  + + E     +         ++EEN    ++ + W++LLR
Sbjct: 1396 YVVKEEDGEEEVEREII---------KQEEN----VDPDYWEKLLR 1428



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 26/42 (61%), Positives = 33/42 (78%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+C
Sbjct: 579 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 620



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  Q
Sbjct: 497 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQ 554


>gi|224043897|ref|XP_002197085.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Taeniopygia
            guttata]
          Length = 1919

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 339/786 (43%), Positives = 454/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 536  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGEEEKSRKRKNK 595

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 596  DPKYAEMEERFYRYGIKPEWMMIHRILNHSVDKKGNVHYLIKWRDLPYDQASWESEDV-D 654

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASE----------DELPRGKGDCQQSEIVALTEQP 748
            ++ Y    DL+ Q     R+ ++ +              +L R          V    QP
Sbjct: 655  IQDY----DLYKQAYWNHRELMRGEEGRPGKKLKKVKMRKLERPPETPTVDPTVKYDRQP 710

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 711  EYLDVTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 770

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 771  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRGGKKASR 830

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK ++ KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 831  MKKEAAVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 890

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 891  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 950

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 951  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1009

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1010 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1069

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1070 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1127

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1128 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1187

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D                 EA     
Sbjct: 1188 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKD-----------------EAT---- 1226

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                  GGG      +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1227 -----EGGG-----DNKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1273

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1274 FKVAQY 1279



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 42/63 (66%)

Query: 58  EINADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCP 117
           EI  D     ++ +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP
Sbjct: 426 EILEDVVGDAEEEDDHHMEFCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLCP 485

Query: 118 KCT 120
           +CT
Sbjct: 486 RCT 488



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 357 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 414


>gi|301773764|ref|XP_002922290.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 4-like [Ailuropoda melanoleuca]
          Length = 1906

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 536  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 595

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 596  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 654

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 655  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 710

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 711  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 770

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 771  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 830

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 831  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 890

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 891  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 950

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 951  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1009

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1010 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1069

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1070 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1127

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1128 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1187

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1188 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1231

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1232 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1273

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1274 FKVAQY 1279



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 439 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 488



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 357 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 414


>gi|410227432|gb|JAA10935.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
 gi|410350199|gb|JAA41703.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
          Length = 1914

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|410963635|ref|XP_003988369.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 1
            [Felis catus]
          Length = 1912

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|351715692|gb|EHB18611.1| Chromodomain-helicase-DNA-binding protein 4 [Heterocephalus glaber]
          Length = 1912

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|39204553|ref|NP_666091.1| chromodomain-helicase-DNA-binding protein 4 [Mus musculus]
 gi|51701319|sp|Q6PDQ2.1|CHD4_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 4;
            Short=CHD-4
 gi|35193271|gb|AAH58578.1| Chromodomain helicase DNA binding protein 4 [Mus musculus]
          Length = 1915

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 535  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 594

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 595  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 653

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 654  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 709

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 710  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 769

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 770  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 829

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 830  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 889

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 890  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 949

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 950  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1008

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1009 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1068

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1069 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1126

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1127 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1186

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1187 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1230

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1231 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1272

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1273 FKVAQY 1278



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 438 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 356 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 413


>gi|119609185|gb|EAW88779.1| chromodomain helicase DNA binding protein 4, isoform CRA_c [Homo
            sapiens]
          Length = 1908

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 539  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 598

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 599  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 657

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 658  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 713

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 714  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 773

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 774  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 833

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 834  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 893

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 894  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 953

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 954  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1012

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1013 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1072

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1073 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1130

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1131 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1190

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1191 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1234

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1235 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1276

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1277 FKVAQY 1282



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 442 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 491



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 360 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 417


>gi|355568209|gb|EHH24490.1| hypothetical protein EGK_08151 [Macaca mulatta]
          Length = 1931

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 317/709 (44%), Positives = 424/709 (59%), Gaps = 82/709 (11%)

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTL 720
            W    R+I+    K G     VKW  LPYD+ TWE+ DE  + +Y      + +     +
Sbjct: 560  WMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIM 618

Query: 721  KKDASEDELPRG--------KGDCQQSE-----IVALTEQPEELK--GGALFPHQLEALN 765
             +D ++   PR         +GD   S       V    QP  +   GG L  +QLE LN
Sbjct: 619  GEDPAQ---PRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLN 675

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            WLR  W +  + ILADEMGLGKT+    F+ SLY E   K P LV  PLST+ NW  EF 
Sbjct: 676  WLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQ 735

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL---------NKKTSSYKFNVLLTTYE 876
            +WAP   VV Y G   +RAIIR+ E+  S  DN           K+ +  KF+VLLT+YE
Sbjct: 736  MWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYE 793

Query: 877  MILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMY 936
            +I  D + L  + W  LVVDE HRLKN+ SK F +LN +   H++LLTGTPLQNN+ E++
Sbjct: 794  LITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELF 853

Query: 937  NLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERM 996
            +LLNFL P  F +L  F E+F D++   ++++L  L+ PHMLRRLK D  +N+P KTE +
Sbjct: 854  HLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI 913

Query: 997  VPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---E 1053
            V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M L+K CNHPYL P      
Sbjct: 914  VRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMES 972

Query: 1054 PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
            P   S  +     IK+S KL LL  ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G 
Sbjct: 973  PKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GY 1031

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
            K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGINLATADTVII+DSD+NP
Sbjct: 1032 K-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNP 1090

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----NKSG-- 1225
            H DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK+K+ML  L V     +K+G  
Sbjct: 1091 HNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSM 1150

Query: 1226 SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDK 1285
            S++E++DIL++GTEELF D      ++ GEN                             
Sbjct: 1151 SKQELDDILKFGTEELFKD------ENEGENK---------------------------- 1176

Query: 1286 CTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW 1334
              E S+ I +D  AIARLLDR+   +  TD+      N+ L S K  ++
Sbjct: 1177 -EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNEYLSSFKVAQY 1221



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 451 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 499



 Score = 74.3 bits (181), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 370 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 427


>gi|395847597|ref|XP_003796455.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Otolemur
            garnettii]
          Length = 1912

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDESTDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|410301138|gb|JAA29169.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
          Length = 1912

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|291392737|ref|XP_002712922.1| PREDICTED: chromodomain helicase DNA binding protein 4-like isoform 1
            [Oryctolagus cuniculus]
          Length = 1905

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 535  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 594

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 595  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 653

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 654  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 709

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 710  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 769

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 770  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 829

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 830  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 889

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 890  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 949

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 950  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1008

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1009 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1068

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1069 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1126

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1127 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1186

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1187 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1230

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1231 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1272

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1273 FKVAQY 1278



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 438 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 356 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 413


>gi|410963637|ref|XP_003988370.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 2
            [Felis catus]
          Length = 1905

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 535  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 594

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 595  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 653

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 654  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 709

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 710  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 769

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 770  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 829

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 830  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 889

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 890  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 949

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 950  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1008

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1009 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1068

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1069 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1126

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1127 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1186

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1187 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1230

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1231 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1272

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1273 FKVAQY 1278



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 438 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 356 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 413


>gi|402884886|ref|XP_003905901.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Papio anubis]
          Length = 1912

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|397499204|ref|XP_003820349.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 1 [Pan
            paniscus]
 gi|410350197|gb|JAA41702.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
          Length = 1905

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 338/786 (43%), Positives = 454/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 535  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 594

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 595  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 653

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 654  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 709

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 710  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 769

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 770  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 829

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 830  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 889

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 890  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 949

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 950  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1008

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1009 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1068

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1069 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1126

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1127 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1186

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1187 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1230

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L +G   N+ L S
Sbjct: 1231 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTEL-QG--MNEYLSS 1272

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1273 FKVAQY 1278



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 438 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 356 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 413


>gi|444510914|gb|ELV09761.1| Chromodomain-helicase-DNA-binding protein 4 [Tupaia chinensis]
          Length = 1875

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 503  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 562

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 563  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 621

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 622  IQDY----DLFKQGYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 677

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 678  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 737

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 738  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 797

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 798  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 857

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 858  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 917

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 918  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 976

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 977  KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1036

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1037 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1094

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1095 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1154

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1155 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1198

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1199 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1240

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1241 FKVAQY 1246



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|392347634|ref|XP_232354.5| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Rattus
            norvegicus]
          Length = 1921

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 535  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 594

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 595  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 653

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 654  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 709

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 710  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 769

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 770  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 829

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 830  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 889

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 890  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 949

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 950  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1008

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1009 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1068

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1069 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1126

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1127 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1186

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1187 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1230

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1231 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1272

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1273 FKVAQY 1278



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 438 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 356 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 413


>gi|432111850|gb|ELK34892.1| Chromodomain-helicase-DNA-binding protein 4 [Myotis davidii]
          Length = 1912

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|383415431|gb|AFH30929.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
          Length = 1899

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 338/786 (43%), Positives = 454/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 529  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 588

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 589  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 647

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 648  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 703

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 704  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 763

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 764  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 823

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 824  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 883

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 884  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 943

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 944  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1002

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1003 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1062

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1063 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1120

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1121 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1180

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1181 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1224

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L +G   N+ L S
Sbjct: 1225 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTEL-QG--MNEYLSS 1266

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1267 FKVAQY 1272



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 432 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 481



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 33/48 (68%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 360 CEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 407


>gi|380798783|gb|AFE71267.1| chromodomain-helicase-DNA-binding protein 4, partial [Macaca mulatta]
          Length = 1847

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 477  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 536

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 537  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 595

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 596  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 651

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 652  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 711

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 712  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 771

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 772  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 831

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 832  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 891

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 892  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 950

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 951  KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1010

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1011 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1068

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1069 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1128

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1129 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1172

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1173 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1214

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1215 FKVAQY 1220



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 380 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 429



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 298 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 355


>gi|348555034|ref|XP_003463329.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Cavia
            porcellus]
          Length = 1893

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 338/786 (43%), Positives = 454/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 523  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 582

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 583  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 641

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 642  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 697

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 698  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 757

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 758  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 817

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 818  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 877

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 878  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 937

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 938  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 996

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 997  KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1056

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1057 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1114

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1115 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1174

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1175 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1218

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L +G   N+ L S
Sbjct: 1219 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTEL-QG--MNEYLSS 1260

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1261 FKVAQY 1266



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 426 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 475



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 344 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 401


>gi|60360510|dbj|BAD90499.1| mKIAA4075 protein [Mus musculus]
          Length = 1945

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 563  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 622

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 623  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 681

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 682  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 737

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 738  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 797

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 798  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 857

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 858  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 917

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 918  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 977

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 978  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1036

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1037 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1096

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1097 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1154

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1155 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1214

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1215 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1258

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1259 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1300

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1301 FKVAQY 1306



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 466 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 515



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 384 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 441


>gi|330417956|ref|NP_001193430.1| chromodomain-helicase-DNA-binding protein 4 [Bos taurus]
 gi|296487143|tpg|DAA29256.1| TPA: chromodomain helicase DNA binding protein 4 [Bos taurus]
          Length = 1912

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|24047226|gb|AAH38596.1| CHD4 protein [Homo sapiens]
 gi|167773199|gb|ABZ92034.1| chromodomain helicase DNA binding protein 4 [synthetic construct]
          Length = 1937

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 539  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 598

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 599  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 657

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 658  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 713

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 714  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 773

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 774  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 833

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 834  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 893

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 894  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 953

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 954  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1012

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1013 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1072

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1073 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1130

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1131 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1190

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1191 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1234

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1235 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1276

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1277 FKVAQY 1282



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 442 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 491



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 360 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 417


>gi|291392739|ref|XP_002712923.1| PREDICTED: chromodomain helicase DNA binding protein 4-like isoform 2
            [Oryctolagus cuniculus]
          Length = 1912

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|344242425|gb|EGV98528.1| Chromodomain-helicase-DNA-binding protein 4 [Cricetulus griseus]
          Length = 1930

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 516  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 575

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 576  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 634

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 635  IQDY----DLFKQGYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 690

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 691  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 750

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 751  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 810

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 811  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 870

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 871  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 930

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 931  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 989

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 990  KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1049

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1050 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1107

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1108 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1167

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1168 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1211

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1212 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1253

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1254 FKVAQY 1259



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 419 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 468



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 337 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 394


>gi|345791649|ref|XP_867754.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 3
            [Canis lupus familiaris]
          Length = 1912

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|395743837|ref|XP_002822857.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 4 [Pongo abelii]
          Length = 1898

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 338/786 (43%), Positives = 454/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 524  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 583

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 584  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 642

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 643  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 698

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 699  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 758

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 759  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 818

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 819  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 878

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 879  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 938

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 939  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 997

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 998  KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1057

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1058 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1115

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1116 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1175

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1176 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1219

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L +G   N+ L S
Sbjct: 1220 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTEL-QG--MNEYLSS 1261

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1262 FKVAQY 1267



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 427 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 476



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 345 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 402


>gi|193785938|dbj|BAG54725.1| unnamed protein product [Homo sapiens]
          Length = 1886

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 454/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 516  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 575

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 576  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 634

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 635  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 690

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 691  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDAILADEMGLGKTVQTAVFLYSLYKEGHSKG 750

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 751  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 810

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 811  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 870

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 871  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 930

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P +TE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 931  RLKADVFKNMPSRTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 989

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 990  KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1049

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1050 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1107

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1108 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1167

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1168 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1211

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L +G   N+ L S
Sbjct: 1212 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTEL-QG--MNEYLSS 1253

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1254 FKVAQY 1259



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 419 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 468



 Score = 68.6 bits (166), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLD  +++ P GKW CP C ++  Q
Sbjct: 337 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDSDMEKAPEGKWSCPHCEKEGIQ 394


>gi|403303237|ref|XP_003942247.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Saimiri
            boliviensis boliviensis]
          Length = 1888

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|354467283|ref|XP_003496099.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Cricetulus
            griseus]
          Length = 1902

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 516  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 575

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 576  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 634

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 635  IQDY----DLFKQGYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 690

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 691  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 750

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 751  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 810

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 811  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 870

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 871  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 930

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 931  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 989

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 990  KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1049

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1050 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1107

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1108 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1167

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1168 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1211

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1212 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1253

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1254 FKVAQY 1259



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 419 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 468



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 337 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 394


>gi|440895655|gb|ELR47793.1| Chromodomain-helicase-DNA-binding protein 4 [Bos grunniens mutus]
          Length = 1945

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 601

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 602  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 660

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 661  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 716

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 717  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 776

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 777  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 836

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 837  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 896

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 897  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 956

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 957  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1015

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1016 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1075

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1076 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1133

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1134 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1193

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1194 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1237

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1238 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 81.3 bits (199), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|355563925|gb|EHH20425.1| hypothetical protein EGK_03279 [Macaca mulatta]
          Length = 1899

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 335/773 (43%), Positives = 446/773 (57%), Gaps = 93/773 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK--------------VLAKRKLENYKAKYGTTVINI-- 656
            +F VKW G S  H SW+ E Q K                  RK +N   K+         
Sbjct: 542  QFFVKWQGMSYWHCSWVSELQRKNDMDEPPSGDFGGDEEKSRKRKNKDPKFAEMEERFYR 601

Query: 657  --CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQ 714
                  W    R+++    K G     +KW  LPYD+ +WE  D   ++ Y    DLF Q
Sbjct: 602  YGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-EIQDY----DLFKQ 656

Query: 715  F---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQPEEL--KGGALFPH 759
                 R+ ++ +         K   ++ E           V    QPE L   GG L P+
Sbjct: 657  SYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPY 716

Query: 760  QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPN 819
            Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K P LV  PLST+ N
Sbjct: 717  QMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIIN 776

Query: 820  WLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNLNKKTSSYKFNVLL 872
            W  EF +WAP++ VV Y G   +RAIIR+ E+   D         +  KK +S KF+VLL
Sbjct: 777  WEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLL 836

Query: 873  TTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNI 932
            T+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH++LLTGTPLQNN+
Sbjct: 837  TSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNL 896

Query: 933  GEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPK 992
             E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLRRLK D  +N+P K
Sbjct: 897  EELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSK 956

Query: 993  TERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT 1052
            TE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L+K CNHPYL P  
Sbjct: 957  TELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDLKKCCNHPYLFPVA 1015

Query: 1053 ---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
                P   +  +     I+AS KL LL  MLK L + GHRVLIFSQMTK+LD+LED+L  
Sbjct: 1016 AMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEH 1075

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDS 1168
            E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGINLATADTVIIYDS
Sbjct: 1076 E-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDS 1133

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----NK 1223
            D+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+ML  L V     +K
Sbjct: 1134 DWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSK 1193

Query: 1224 SG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDV 1281
            +G  S++E++DIL++GTEELF D     G D                             
Sbjct: 1194 TGSMSKQELDDILKFGTEELFKDEATDGGGD----------------------------- 1224

Query: 1282 YQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW 1334
              +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S K  ++
Sbjct: 1225 --NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSSFKVAQY 1272



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 363 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 420


>gi|441670660|ref|XP_003273866.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 4 [Nomascus leucogenys]
          Length = 1910

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 338/786 (43%), Positives = 454/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 540  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 599

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 600  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 658

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 659  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 714

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 715  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 774

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 775  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 834

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 835  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 894

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 895  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 954

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 955  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1013

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1014 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1073

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1074 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1131

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1132 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1191

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1192 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1235

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L +G   N+ L S
Sbjct: 1236 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTEL-QG--MNEYLSS 1277

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1278 FKVAQY 1283



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 443 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 492



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 361 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 418


>gi|426227030|ref|XP_004007632.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Ovis aries]
          Length = 1963

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 593  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 652

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 653  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 711

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 712  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 767

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 768  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 827

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 828  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 887

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 888  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 947

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 948  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 1007

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 1008 RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1066

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1067 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1126

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1127 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1184

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1185 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1244

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1245 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1288

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1289 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1330

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1331 FKVAQY 1336



 Score = 81.3 bits (199), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 496 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 545



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 414 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 471


>gi|355678680|gb|AER96183.1| chromodomain helicase DNA binding protein 4 [Mustela putorius furo]
          Length = 1457

 Score =  541 bits (1394), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 461  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 520

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 521  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 579

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 580  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 635

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 636  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 695

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 696  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 755

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 756  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 815

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 816  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 875

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 876  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 934

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 935  KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 994

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 995  TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1052

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1053 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1112

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1113 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1156

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1157 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1198

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1199 FKVAQY 1204



 Score = 80.9 bits (198), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 371 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 413



 Score = 71.2 bits (173), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 282 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 339


>gi|334348294|ref|XP_001369474.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Monodelphis
            domestica]
          Length = 1823

 Score =  541 bits (1393), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 453  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGEEEKSRKRKNK 512

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 513  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 571

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 572  VQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 627

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 628  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 687

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 688  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 747

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 748  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 807

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 808  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 867

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 868  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 926

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 927  KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 986

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 987  TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1044

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1045 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1104

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1105 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1148

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1149 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1190

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1191 FKVAQY 1196



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 356 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 405



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 30/42 (71%)

Query: 84  GGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 290 GGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 331


>gi|25412286|pir||B84645 hypothetical protein At2g25170 [imported] - Arabidopsis thaliana
          Length = 1359

 Score =  541 bits (1393), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 288/621 (46%), Positives = 401/621 (64%), Gaps = 47/621 (7%)

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTL 720
            W    R+++ R  +DG  E  VK+  L YDEC WE   E  +  + +    F     +T 
Sbjct: 178  WTTVDRILACRE-EDGELEYLVKYKELSYDECYWES--ESDISTFQNEIQRFKDVNSRTR 234

Query: 721  K-KDASEDELPRGKGDCQQSEIVALTEQPEELKG----------GALFPHQLEALNWLRK 769
            + KD      PR   D QQ         PE LK           G L P+QLE LN+LR 
Sbjct: 235  RSKDVDHKRNPR---DFQQ-----FDHTPEFLKDVMIYLFPAIEGLLHPYQLEGLNFLRF 286

Query: 770  CWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAP 829
             W K  +VILADEMGLGKT+ + A ++SL+ E    +P LV+ PLST+ NW  EFA WAP
Sbjct: 287  SWSKQTHVILADEMGLGKTIQSIALLASLFEE--NLIPHLVIAPLSTLRNWEREFATWAP 344

Query: 830  NLNVVEYHGCAKARAIIRQYEWHASDPDNL-----------NKKTSSYKFNVLLTTYEMI 878
             +NVV Y G A+ARA+IR++E++ S                  K    KF+VLLT+YEMI
Sbjct: 345  QMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMI 404

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
              DS+ L+ + WE ++VDEGHRLKN  SKLFS L  +S  HR+LLTGTPLQNN+ E++ L
Sbjct: 405  NLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFML 464

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            ++FL    F SL  F+E+F D+   +++  L K++APH+LRR+KKD M+++PPK E ++ 
Sbjct: 465  MHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILR 524

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGS 1058
            V+LSS+Q EYY+A+ T+NYQ+L    KG AQ S+ NI+M+LRKVC HPY++ G EP    
Sbjct: 525  VDLSSLQKEYYKAIFTRNYQVLTK--KGGAQISLNNIMMELRKVCCHPYMLEGVEPVIHD 582

Query: 1059 VEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
                 +  +++  KL LL  M+  L ++GHRVLI++Q   +LD+LEDY         YER
Sbjct: 583  ANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCT--HKKWQYER 640

Query: 1119 VDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DG V   +RQ  I RFN ++ ++F FLLSTR+ GLGINLATADTVIIYDSD+NPHAD+Q
Sbjct: 641  IDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQ 700

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----SGSQKEVEDI 1233
            AM RAHR+GQ+ ++++YRL+ R ++EER++QL KKK++L+ L V K    + +Q+E++DI
Sbjct: 701  AMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQNINQEELDDI 760

Query: 1234 LRWGTEELF---NDSPGINGK 1251
            +R+G++ELF   +D  G +GK
Sbjct: 761  IRYGSKELFASEDDEAGKSGK 781



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPISNLDSI 135
           C  C    NL+ C++C   +H +CL PPLK      W+CP+C      + P++ +D I
Sbjct: 52  CQACGESTNLVSCNTCTYAFHAKCLVPPLKDASVENWRCPEC------VSPLNEIDKI 103


>gi|444722915|gb|ELW63587.1| Chromodomain-helicase-DNA-binding protein 3 [Tupaia chinensis]
          Length = 2077

 Score =  540 bits (1392), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 333/797 (41%), Positives = 446/797 (55%), Gaps = 122/797 (15%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVIN-ICDER- 660
            EF VKWVG S  H SW  E QL++       NY+ K          YG+   +   D+R 
Sbjct: 337  EFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRK 396

Query: 661  ---------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                                 W    R+I+    K G     VKW  LPYD+ TWE+ DE
Sbjct: 397  VKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEE-DE 455

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGDCQQSE-----IVALTE 746
              + +Y      + +     + +D ++   PR         +GD   S       V    
Sbjct: 456  MNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGDGPPSSPTNDPTVKYET 512

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   
Sbjct: 513  QPRFITATGGTLHLYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHT 572

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL----- 859
            K P LV  PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN      
Sbjct: 573  KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGK 630

Query: 860  ----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +
Sbjct: 631  KAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGY 690

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ P
Sbjct: 691  KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGP 750

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI
Sbjct: 751  HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNI 809

Query: 1036 VMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M L+K CNHPYL P      P   S  +     IK+S KL LL  ML+ L ++GHRVLI
Sbjct: 810  MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLI 869

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 870  FSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAG 927

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASV-------EE 1204
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASV         
Sbjct: 928  GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVXXXXXXXXX 987

Query: 1205 RILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENN 1257
               Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D      ++ GEN 
Sbjct: 988  XXTQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK 1041

Query: 1258 TSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLA 1317
                                          E S+ I +D  AI RLLDR+   +  TD+ 
Sbjct: 1042 -----------------------------EEDSSVIHYDNEAITRLLDRNQDATEDTDVQ 1072

Query: 1318 EGDLENDMLGSVKATEW 1334
                 N+ L S K  ++
Sbjct: 1073 N---MNEYLSSFKVAQY 1086


>gi|392340124|ref|XP_001063352.3| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Rattus
            norvegicus]
          Length = 1921

 Score =  540 bits (1392), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 535  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 594

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 595  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 653

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 654  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 709

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 710  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 769

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 770  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 829

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 830  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 889

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P S  +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 890  KLLLTGTPLQNNLEELFHLLNFLTPESRVNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 949

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 950  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1008

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1009 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1068

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1069 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1126

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1127 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1186

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1187 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1230

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1231 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1272

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1273 FKVAQY 1278



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 438 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 356 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 413


>gi|363728319|ref|XP_003640489.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 4 [Gallus gallus]
          Length = 1924

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 336/786 (42%), Positives = 452/786 (57%), Gaps = 107/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 543  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGEEEKSRKRKNK 602

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 603  DPKYAEMEERFYRYGIKPEWMMIHRILNHSVDKKGNVHYLIKWRDLPYDQASWESEDV-D 661

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASE----------DELPRGKGDCQQSEIVALTEQP 748
            ++ Y    DL+ Q     R+ ++ +              +L R          V    QP
Sbjct: 662  IQDY----DLYKQAYWNHRELMRGEEGRPGKKLKKVKMRKLERPPETPTVDPTVKYDRQP 717

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 718  EYLDVTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 777

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 778  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRGGKKASR 837

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK ++ KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 838  MKKEAAVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 897

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 898  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 957

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 958  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1016

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1017 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1076

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1077 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1134

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1135 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1194

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G                  
Sbjct: 1195 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATEGG------------------ 1236

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L +G   N+ L S
Sbjct: 1237 --------------DNKEGEDSSVIHYDDKAIERLLDRNQDETEDTEL-QG--MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 42/63 (66%)

Query: 58  EINADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCP 117
           EI  D     ++ +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP
Sbjct: 433 EILEDVVGDAEEEDDHHMEFCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLCP 492

Query: 118 KCT 120
           +CT
Sbjct: 493 RCT 495



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 364 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 421


>gi|326912771|ref|XP_003202720.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like
            [Meleagris gallopavo]
          Length = 1922

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 454/786 (57%), Gaps = 107/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 543  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGEEEKSRKRKNK 602

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 603  DPKYAEMEERFYRYGIKPEWMMIHRILNHSVDKKGNVHYLIKWRDLPYDQASWESEDV-D 661

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASE----------DELPRGKGDCQQSEIVALTEQP 748
            ++ Y    DL+ Q     R+ ++ +              +L R          V    QP
Sbjct: 662  IQDY----DLYKQAYWNHRELMRGEEGRPGKKLKKVKMRKLERPPETPTVDPTVKYDRQP 717

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 718  EYLDVTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 777

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 778  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRGGKKASR 837

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK ++ KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 838  MKKEAAVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 897

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 898  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 957

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 958  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1016

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1017 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1076

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1077 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1134

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 1135 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 1194

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D       + G+N            
Sbjct: 1195 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDE----ATEGGDN------------ 1238

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                            K  E S+ I +D+ AI RLLDR+  ++  T+L +G   N+ L S
Sbjct: 1239 ----------------KEGEDSSVIHYDDKAIERLLDRNQDETEDTEL-QG--MNEYLSS 1279

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1280 FKVAQY 1285



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 42/63 (66%)

Query: 58  EINADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCP 117
           EI  D     ++ +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP
Sbjct: 433 EILEDVVGDAEEEDDHHMEFCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLCP 492

Query: 118 KCT 120
           +CT
Sbjct: 493 RCT 495



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 364 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 421


>gi|189240851|ref|XP_001812556.1| PREDICTED: similar to chromodomain helicase-DNA-binding protein 3
            [Tribolium castaneum]
          Length = 1966

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 314/719 (43%), Positives = 433/719 (60%), Gaps = 95/719 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKY------------------GTTVI 654
            EF VKW+  S+ H SW+ E Q++V       N+  KY                     ++
Sbjct: 519  EFFVKWMDYSHWHCSWVSELQIEVNHPLLYRNFVRKYDMEEPPKLEESLDEMDQRSKRLL 578

Query: 655  NI-CDER----------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKL 697
            ++ CD +                W    R+I+ R  +DG     VKW  L YD+ TWE+ 
Sbjct: 579  SLGCDYKDAELEERFYRYGIKPEWLVVHRIINHRQMRDGRTLYLVKWRELSYDQATWEEE 638

Query: 698  DEP------ALEKYSHLT-----------------------DLFVQFERQTLKKDASEDE 728
             +       A+E Y  L                        +L    +R T ++     E
Sbjct: 639  SDEIVGLKQAIEYYMDLRAACTQQNVSSKGKGKKGKKSKTRELLDDEDRTTARRYTPPPE 698

Query: 729  LPRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLG 786
             P    D ++     L +QP  L   G  L  +QLE LNWLR  W +  + ILADEMGLG
Sbjct: 699  KP--ITDLKKK----LDKQPSYLDESGMQLHNYQLEGLNWLRYSWGQGIDTILADEMGLG 752

Query: 787  KTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAII 846
            KT+    F+ SLY E   K P LV VPLST+ NW  EF  WAP+  V+ Y G   +RA+I
Sbjct: 753  KTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYVITYVGDKDSRAVI 812

Query: 847  RQYEWHASDPDNLNK-------KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
            R+ E+  S  +N++K       K SS KFNVLLT+YE+I  D++ L  + W VLVVDE H
Sbjct: 813  RENEF--SFEENVSKSGRISRVKASSIKFNVLLTSYELISIDATCLGSIEWAVLVVDEAH 870

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLK++ SK F LLNS++ Q+++LLTGTPLQNN+ E+++LLNFL    F  L++F+ +F D
Sbjct: 871  RLKSNQSKFFRLLNSYNIQYKLLLTGTPLQNNLEELFHLLNFLNSQKFNDLATFQNEFAD 930

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++  ++V++L +L+ PHMLRRLK D ++N+P K+E +V VELS +Q +YY+ +LT+N++ 
Sbjct: 931  ISKEEQVKKLHELLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEA 990

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L   G G +  S+LNI+M L+K CNHPYL P      P   +  +  +  IKAS KL LL
Sbjct: 991  LNPKGGGQS-VSLLNIMMDLKKCCNHPYLFPVAAEEAPIGPTGGYDIQSLIKASGKLVLL 1049

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML++L ++GHRVLIFSQMTK+LDILED+L  E G K YER+DG+++   RQ AI RFN
Sbjct: 1050 AKMLRILREQGHRVLIFSQMTKMLDILEDFLEGE-GYK-YERIDGAITGSSRQEAIDRFN 1107

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1108 APGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1167

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGTEELFNDSPG 1247
             V R SVEER+ Q+AK+K+ML  L V         + +++E++DILR+GTEELF +  G
Sbjct: 1168 FVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEELFKEDEG 1226



 Score = 78.6 bits (192), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C IC  GG LLCCDSCP  YH  CL+PPL  IP+G W+CP+C+
Sbjct: 434 CRICKDGGELLCCDSCPSAYHTHCLNPPLVEIPDGDWKCPRCS 476



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CPR YHL CLDP L+  P GKW CP C
Sbjct: 376 CEVCQQGGEIILCDTCPRAYHLVCLDPELEDTPEGKWSCPHC 417


>gi|270013510|gb|EFA09958.1| hypothetical protein TcasGA2_TC012115 [Tribolium castaneum]
          Length = 1969

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 314/719 (43%), Positives = 433/719 (60%), Gaps = 95/719 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKY------------------GTTVI 654
            EF VKW+  S+ H SW+ E Q++V       N+  KY                     ++
Sbjct: 522  EFFVKWMDYSHWHCSWVSELQIEVNHPLLYRNFVRKYDMEEPPKLEESLDEMDQRSKRLL 581

Query: 655  NI-CDER----------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKL 697
            ++ CD +                W    R+I+ R  +DG     VKW  L YD+ TWE+ 
Sbjct: 582  SLGCDYKDAELEERFYRYGIKPEWLVVHRIINHRQMRDGRTLYLVKWRELSYDQATWEEE 641

Query: 698  DEP------ALEKYSHLT-----------------------DLFVQFERQTLKKDASEDE 728
             +       A+E Y  L                        +L    +R T ++     E
Sbjct: 642  SDEIVGLKQAIEYYMDLRAACTQQNVSSKGKGKKGKKSKTRELLDDEDRTTARRYTPPPE 701

Query: 729  LPRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLG 786
             P    D ++     L +QP  L   G  L  +QLE LNWLR  W +  + ILADEMGLG
Sbjct: 702  KP--ITDLKKK----LDKQPSYLDESGMQLHNYQLEGLNWLRYSWGQGIDTILADEMGLG 755

Query: 787  KTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAII 846
            KT+    F+ SLY E   K P LV VPLST+ NW  EF  WAP+  V+ Y G   +RA+I
Sbjct: 756  KTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYVITYVGDKDSRAVI 815

Query: 847  RQYEWHASDPDNLNK-------KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
            R+ E+  S  +N++K       K SS KFNVLLT+YE+I  D++ L  + W VLVVDE H
Sbjct: 816  RENEF--SFEENVSKSGRISRVKASSIKFNVLLTSYELISIDATCLGSIEWAVLVVDEAH 873

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLK++ SK F LLNS++ Q+++LLTGTPLQNN+ E+++LLNFL    F  L++F+ +F D
Sbjct: 874  RLKSNQSKFFRLLNSYNIQYKLLLTGTPLQNNLEELFHLLNFLNSQKFNDLATFQNEFAD 933

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++  ++V++L +L+ PHMLRRLK D ++N+P K+E +V VELS +Q +YY+ +LT+N++ 
Sbjct: 934  ISKEEQVKKLHELLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEA 993

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L   G G +  S+LNI+M L+K CNHPYL P      P   +  +  +  IKAS KL LL
Sbjct: 994  LNPKGGGQS-VSLLNIMMDLKKCCNHPYLFPVAAEEAPIGPTGGYDIQSLIKASGKLVLL 1052

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML++L ++GHRVLIFSQMTK+LDILED+L  E G K YER+DG+++   RQ AI RFN
Sbjct: 1053 AKMLRILREQGHRVLIFSQMTKMLDILEDFLEGE-GYK-YERIDGAITGSSRQEAIDRFN 1110

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1111 APGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1170

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGTEELFNDSPG 1247
             V R SVEER+ Q+AK+K+ML  L V         + +++E++DILR+GTEELF +  G
Sbjct: 1171 FVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEELFKEDEG 1229



 Score = 78.6 bits (192), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C IC  GG LLCCDSCP  YH  CL+PPL  IP+G W+CP+C+
Sbjct: 437 CRICKDGGELLCCDSCPSAYHTHCLNPPLVEIPDGDWKCPRCS 479



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CPR YHL CLDP L+  P GKW CP C
Sbjct: 379 CEVCQQGGEIILCDTCPRAYHLVCLDPELEDTPEGKWSCPHC 420


>gi|26330021|dbj|BAC28749.1| unnamed protein product [Mus musculus]
          Length = 1045

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 287  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 346

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 347  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 405

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 406  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 461

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 462  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 521

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 522  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 581

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 582  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 641

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 642  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 701

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 702  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 760

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 761  KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 820

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 821  TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 878

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 879  NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 938

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 939  LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 982

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 983  ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1024

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1025 FKVAQY 1030



 Score = 80.1 bits (196), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 197 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 239



 Score = 70.5 bits (171), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 33/48 (68%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 118 CEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 165


>gi|301771598|ref|XP_002921219.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like, partial
            [Ailuropoda melanoleuca]
          Length = 1363

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 314/696 (45%), Positives = 419/696 (60%), Gaps = 82/696 (11%)

Query: 674  KDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG- 732
            K G     VKW  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR  
Sbjct: 3    KKGNYHYLVKWRDLPYDQSTWEE-DEMNIPEYEDHKQSYWRHRELIMGEDPAQ---PRKY 58

Query: 733  -------KGDCQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVI 778
                   +GD   S       V    QP  +   GG L  +QLE LNWLR  W +  + I
Sbjct: 59   KKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTI 118

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+    F+ SLY E   K P LV  PLST+ NW  EF +WAP   VV Y G
Sbjct: 119  LADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTG 178

Query: 839  CAKARAIIRQYEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVP 889
               +RAIIR+ E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + 
Sbjct: 179  DKDSRAIIRENEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIR 236

Query: 890  WEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPS 949
            W  LVVDE HRLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +
Sbjct: 237  WACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNN 296

Query: 950  LSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYY 1009
            L  F E+F D++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY
Sbjct: 297  LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYY 356

Query: 1010 RAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMR 1066
            + +LT+N++ L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     
Sbjct: 357  KYILTRNFEALNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGAL 415

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVG 1126
            IKAS KL LL  +L+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++  
Sbjct: 416  IKASGKLMLLQKILRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGA 473

Query: 1127 DRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1185
             RQ AI RFN   + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRI
Sbjct: 474  LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRI 533

Query: 1186 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGT 1238
            GQ+ ++++YR V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GT
Sbjct: 534  GQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGT 593

Query: 1239 EELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDEN 1298
            EELF D      ++ GEN                               E S+ I +D  
Sbjct: 594  EELFKD------ENEGENK-----------------------------EEDSSVIHYDNE 618

Query: 1299 AIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW 1334
            AIARLLDR+   +  TD+      N+ L S K  ++
Sbjct: 619  AIARLLDRNQDATEDTDVQN---MNEYLSSFKVAQY 651


>gi|47227437|emb|CAG04585.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2248

 Score =  538 bits (1385), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 348/884 (39%), Positives = 485/884 (54%), Gaps = 140/884 (15%)

Query: 605  VKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT--- 651
            +KG+A   EF VK V +S  H +WI E QL++       NY+ K          YG+   
Sbjct: 449  MKGRA-EREFFVKLVAQSYWHCTWITELQLEIFHSVMYRNYQRKTDMDEPPSLDYGSGGE 507

Query: 652  ---TVINICDERWKQPQ---------------------RVISLRSSKDGTREAFVKWTGL 687
                ++     R K PQ                     R+I+    K G     VKW  L
Sbjct: 508  DENALLKSEKRRAKDPQYAVLEDKYYRYGIKPEWMMIHRIINHSVDKKGICHYLVKWKDL 567

Query: 688  PYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE------- 740
             YD+CTWE+ D+  +  ++     + +     +K+D  + +  R K    + E       
Sbjct: 568  TYDQCTWER-DDMDVPDFAIYKKNYWKHRDAIMKEDPDKPKRMRSKSQEGEEESPASPVT 626

Query: 741  --IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFIS 796
               +   EQP+ +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ 
Sbjct: 627  DPTIKYEEQPDFVTATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLY 686

Query: 797  SLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDP 856
            SL+ E   K P LV  PLST+ NW  EF +WAP+  VV Y G   +RAIIR+ E+   D 
Sbjct: 687  SLFKEGHTKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAIIRENEFSFDDT 746

Query: 857  D-NLNKKT------SSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLF 909
                 KK       +  KF+VLLT+YE++  D + L+ + W  LVVDE HRLKN+ SK F
Sbjct: 747  AVKAGKKAFKLRREAPIKFHVLLTSYELVTIDQTALKSIEWACLVVDEAHRLKNNQSKFF 806

Query: 910  SLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEEL 969
              LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L
Sbjct: 807  RRLNDYKIDHKLLLTGTPLQNNLEELFHLLNFLTPNRFNNLEGFLEEFADISKEDQIKKL 866

Query: 970  KKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ------AEYYRAMLTKNYQILRNI 1023
              L+ PHMLRRLK D  +N+P KTE +V VELS +Q       +YY+ +LTKN++ L + 
Sbjct: 867  HDLLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKYDTLETKYYKHILTKNFEALNSK 926

Query: 1024 GKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSV---EFLHEMRIKASAKLTLLHSML 1080
            G G  Q S+LNI+M L+K CNHPYL P    ++       +      KAS KL LL  ML
Sbjct: 927  GGG-NQVSLLNIMMDLKKCCNHPYLFPAASMEAQKTPTGAYEGSALTKASGKLMLLQKML 985

Query: 1081 KVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS 1140
            + L ++GHRVL+FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   +
Sbjct: 986  RKLKEQGHRVLVFSQMTKMLDLLEDFLDHE-GYK-YERIDGGITGALRQEAIDRFNAPGA 1043

Query: 1141 -RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI----------------------- 1176
             +F FLLSTR+ GLGINLATADTVII+DSD+NPH DI                       
Sbjct: 1044 CQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQVAVGSAGRGAARCGADLNRRPS 1103

Query: 1177 ---QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----NKSG--S 1226
               QA +RAHRIGQ+ ++++YR V RASVEERI Q+AK+K+ML  L V     +K+G  S
Sbjct: 1104 LPAQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMS 1163

Query: 1227 QKEVEDILRWGTEELFNDSPGINGKDMGENNT--SIEEAVRDLEQKHRKR-------GGG 1277
            ++E++DIL++GTEELF        KD GE +T  S       LE  +  +         G
Sbjct: 1164 KQELDDILKFGTEELF--------KDEGEEDTLDSSSPLQNRLEPMNASKVDPSPNLPAG 1215

Query: 1278 LGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--N 1335
            + +  +DK  +  + I +D  AI RLLDRS      TD A+    N+ L S K  ++   
Sbjct: 1216 MKNSSKDKVEDEGSVIHYDSTAIERLLDRSQ---DDTDDADVQNMNEYLSSFKVAQYMVR 1272

Query: 1336 EETTEDQAESPVAAVDDASAENSERKEENAVTGIEENEWDRLLR 1379
            EE   ++ E  +            ++EEN    ++ + W++LLR
Sbjct: 1273 EEDKTEEIEREII-----------KQEEN----VDPDYWEKLLR 1301



 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 359 DDDHMEFCRVCKDGGELLCCDTCTSSYHIHCLNPPLPEIPNGEWLCPRCT 408



 Score = 70.9 bits (172), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 4/59 (6%)

Query: 71  NDGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
            DGY  +    C +C  GG ++ CD+CPR YHL CL+P L + P GKW CP C ++  Q
Sbjct: 266 GDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDKAPEGKWSCPHCEKEGIQ 324


>gi|432920325|ref|XP_004079948.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Oryzias
            latipes]
          Length = 1963

 Score =  538 bits (1385), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 325/790 (41%), Positives = 445/790 (56%), Gaps = 112/790 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT------TVINI 656
            EF VK VG+S  H +WI E QL++       NY+ K          YG+      +V   
Sbjct: 562  EFFVKLVGQSYWHCTWITELQLEIFHSVMYRNYQRKTDMDEPPSLDYGSGGEEENSVGKS 621

Query: 657  CDERWKQPQ---------------------RVISLRSSKDGTREAFVKWTGLPYDECTWE 695
               R K PQ                     R+I+    K G     VKW  L YD+CTWE
Sbjct: 622  EKRRAKDPQFAILEDKYYKYGIKPEWMMIHRIINHSLDKKGVYHYLVKWRDLTYDQCTWE 681

Query: 696  KLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE---------IVALTE 746
            + D+  +  ++     + +     +K+D  +    R K    + E          +   E
Sbjct: 682  R-DDMTIPDFAIYKASYWRHRDAIMKEDPDKPRKMRTKSAEGEEESPPSPLTDPTIKYEE 740

Query: 747  QPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKA 804
            QP+ +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SL+ E   
Sbjct: 741  QPDFVTATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLFKEGHT 800

Query: 805  KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN---- 860
            K P LV  PLST+ NW  EF +WAP+  VV Y G   +RAIIR+ E+   D         
Sbjct: 801  KGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAIIRENEFSFDDTAVKGGKKA 860

Query: 861  ---KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSF 917
               ++ +  KF+VLLT+YE++  D + L+ + W  LVVDE HRLKN+ SK F  LN +  
Sbjct: 861  FKLRREAPIKFHVLLTSYELVTIDQTALKSIEWACLVVDEAHRLKNNQSKFFRRLNDYKI 920

Query: 918  QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHM 977
             +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ PHM
Sbjct: 921  DYKLLLTGTPLQNNLEELFHLLNFLTPNRFNNLEGFLEEFADISKEDQIKKLHDLLGPHM 980

Query: 978  LRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVM 1037
            LRRLK D  +N+P KT+  +         +YY+ +LTKN++ L + G G  Q S+LNI+M
Sbjct: 981  LRRLKADVFKNMPAKTDTYMIFFFFFKSRKYYKLILTKNFEALNSKGGG-NQVSLLNIMM 1039

Query: 1038 QLRKVCNHPYLIP-----GTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
             L+K CNHPYL P       +  SG+ E       KAS KL LL  ML+ L ++GHRVL+
Sbjct: 1040 DLKKCCNHPYLFPVASMEAQKTPSGAYE--GSALTKASGKLMLLQKMLRKLKEQGHRVLV 1097

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ 
Sbjct: 1098 FSQMTKMLDLLEDFLDHE-GYK-YERIDGGITGALRQEAIDRFNAPGACQFCFLLSTRAG 1155

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK
Sbjct: 1156 GLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAK 1215

Query: 1212 KKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            +K+ML  L V     +K+GS  ++E++DIL++GTEELF D                    
Sbjct: 1216 RKMMLTHLVVRPGLGSKAGSMTKQELDDILKFGTEELFKDE------------------- 1256

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEND 1324
                        G GD  +D   EG+  I +D  AI RLLDRS   +  TD+      N+
Sbjct: 1257 ------------GEGDKVED---EGNV-IHYDSTAIERLLDRSQDATDDTDVQN---MNE 1297

Query: 1325 MLGSVKATEW 1334
             L S K  ++
Sbjct: 1298 YLSSFKVAQY 1307



 Score = 77.0 bits (188), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 43/66 (65%)

Query: 54  RLKNEINADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGK 113
           R+ +E+++   +     +D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+
Sbjct: 448 RVISEVSSGVPAGGDDEDDDHMEFCRVCKDGGELLCCDTCTSSYHIHCLNPPLPEIPNGE 507

Query: 114 WQCPKC 119
           W CP+C
Sbjct: 508 WLCPRC 513



 Score = 73.6 bits (179), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLK 127
           DGY  +    C +C  GG ++ CD+CPR YHL CL+P L + P GKW CP C ++  Q +
Sbjct: 373 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDKAPEGKWSCPHCEKEGIQWE 432

Query: 128 PISNLDSISKRARSKIITIKSQSGVKSSGADK 159
                    +      +  +  SGV + G D+
Sbjct: 433 AKDEDFEDFEEDSEDRVISEVSSGVPAGGDDE 464


>gi|383851360|ref|XP_003701201.1| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
            [Megachile rotundata]
          Length = 1967

 Score =  537 bits (1384), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 322/737 (43%), Positives = 429/737 (58%), Gaps = 95/737 (12%)

Query: 595  QEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYG---- 650
            +EP+ +++A  + K    EF VKW   S  H  WI E QL V       NY  KY     
Sbjct: 500  EEPSTSKAAPKQRKI--REFFVKWADMSYWHCDWITELQLDVFHPLMFRNYSRKYDMDEP 557

Query: 651  -----------TTVINI-------------CDER---------WKQPQRVISLRSSKDGT 677
                       T V  +              +ER         W    RVI+ R S+DG 
Sbjct: 558  PKLEEPLDESDTRVKRLKEQDGATNRDEYNLEERFYRYGVRPEWLVVHRVINHRLSRDGR 617

Query: 678  REAFVKWTGLPYDECTWEKLDE------PALEKYSHL----------------------- 708
                VKW  L YD+ TWE   E       A+E Y  L                       
Sbjct: 618  ATYLVKWRELGYDQATWEDEHEDIPGLKQAIEYYLDLRAANCCDGSSSRKGKKGKGKKSK 677

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNW 766
            T   +  E +T K+     + P    D ++        QPE L   G  L P+QLE LNW
Sbjct: 678  TRELIDDEERTPKRYTPPPDKP--TTDLKKK----YERQPEYLDQTGMQLHPYQLEGLNW 731

Query: 767  LRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFAL 826
            LR  W +  + ILADEMGLGKT+    F+ SLY E   K P LV VPLST+ NW  EF  
Sbjct: 732  LRYSWGQGIDTILADEMGLGKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFET 791

Query: 827  WAPNLNVVEYHGCAKARAIIRQ----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILAD 881
            WAP+   V Y G   +R +IR+    +E  A      +K +++  KFNVLLT+YE+I  D
Sbjct: 792  WAPDFYCVTYVGDKDSRIVIRENELSFEEGAVRGGRASKIRSNQIKFNVLLTSYELISID 851

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
            S+ L  + W VLVVDE HRLK++ SK F LL S++  +++LLTGTPLQNN+ E+++LLNF
Sbjct: 852  SACLGSIDWAVLVVDEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNF 911

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L    F  L++F+ +F D++  ++V++L +L+ PHMLRRLK D ++N+P K+E +V VEL
Sbjct: 912  LCRDKFNDLAAFQNEFADISKEEQVKKLHELLGPHMLRRLKADVLKNMPSKSEFIVRVEL 971

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE---PDSGS 1058
            S +Q +YY+ +LT+N++ L   G G  Q S+LNI+M L+K CNHPYL P      P + +
Sbjct: 972  SPMQKKYYKYILTRNFEALNPKGGG-QQVSLLNIMMDLKKCCNHPYLFPAASQEAPTAPN 1030

Query: 1059 VEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
              +     IKA+ KL LL  ML+ L  +GHRVLIFSQMTK+LDILEDYL  E G K YER
Sbjct: 1031 GTYETSALIKAAGKLVLLSKMLRKLRDDGHRVLIFSQMTKMLDILEDYLEGE-GYK-YER 1088

Query: 1119 VDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DG+++   RQ AI RFN   + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQ
Sbjct: 1089 IDGNITGAQRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ 1148

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEV 1230
            A +RAHRIGQ+ ++++YR V R SVEER+ Q+AK+K+ML  L V         + S++E+
Sbjct: 1149 AFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFSKQEL 1208

Query: 1231 EDILRWGTEELFNDSPG 1247
            +DILR+GTEELF +  G
Sbjct: 1209 DDILRFGTEELFKEEEG 1225



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C IC  GG LLCCDSC   YH  CL+PPL  IP+G W+CP+C+
Sbjct: 433 CRICKDGGELLCCDSCTSAYHTHCLNPPLSEIPDGDWKCPRCS 475



 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CPR YHL CL+P L+  P GKW CP C
Sbjct: 373 CEVCQQGGEIILCDTCPRAYHLVCLEPELEETPEGKWSCPHC 414


>gi|327283577|ref|XP_003226517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Anolis
            carolinensis]
          Length = 1918

 Score =  537 bits (1384), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 332/783 (42%), Positives = 446/783 (56%), Gaps = 101/783 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTTVINI------ 656
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G     +      
Sbjct: 537  QFFVKWQGMSYWHCSWVSELQLELHCQVLFRNYQRKNDMDEPPSGDFGGEEEKLRKRKNK 596

Query: 657  ------CDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  +E  
Sbjct: 597  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGNVHYLIKWRDLPYDQASWEN-EEED 655

Query: 702  LEKYSHLTDLFVQFERQTLKKDASE----------DELPRGKGDCQQSEIVALTEQPEEL 751
            ++ Y      +    R+ ++ D              +L R          V    QP+ L
Sbjct: 656  VQDYDSFKQSYWN-HRELMRGDEGRPGKKIKKVKLRKLERPPETPTVDPTVKYDRQPDYL 714

Query: 752  --KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
               GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K P L
Sbjct: 715  DVTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFL 774

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNLNKK 862
            V  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         +  KK
Sbjct: 775  VGAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASKMKK 834

Query: 863  TSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVL 922
             +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH++L
Sbjct: 835  EASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLL 894

Query: 923  LTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLK 982
            LTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLRRLK
Sbjct: 895  LTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLK 954

Query: 983  KDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKV 1042
             D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L+K 
Sbjct: 955  ADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDLKKC 1013

Query: 1043 CNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKL 1099
            CNHPYL P      P   +  F     I+AS KL LL  MLK L + GHRVLIFSQMTK+
Sbjct: 1014 CNHPYLFPVAAMEAPKMPNGMFDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKM 1073

Query: 1100 LDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLA 1158
            LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGINLA
Sbjct: 1074 LDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAPQFCFLLSTRAGGLGINLA 1131

Query: 1159 TADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ 1218
            TADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+ML  
Sbjct: 1132 TADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTH 1191

Query: 1219 LFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKH 1271
            L V     +K+G  S++E++DIL++GTEELF D    +G      + S+           
Sbjct: 1192 LVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATESGDTKEGEDISV----------- 1240

Query: 1272 RKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKA 1331
                                 I +D+ AI RLLDR+       + AE    N+ L S K 
Sbjct: 1241 ---------------------IHYDDKAIERLLDRNQ---DEIEDAEIQGMNEYLSSFKV 1276

Query: 1332 TEW 1334
             ++
Sbjct: 1277 AQY 1279



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 440 DDHHMEFCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLCPRCT 489



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 358 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 415


>gi|444728247|gb|ELW68711.1| Chromodomain-helicase-DNA-binding protein 5 [Tupaia chinensis]
          Length = 2128

 Score =  537 bits (1384), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 343/892 (38%), Positives = 477/892 (53%), Gaps = 160/892 (17%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            EF VKW G S  H SW+ E QL++       NY+ K          YG+           
Sbjct: 458  EFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRK 517

Query: 652  ---TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                +    +ER         W    R+++    K G     +KW  LPYD+CTWE +D+
Sbjct: 518  NKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWE-IDD 576

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK------- 752
              +  Y +L   +       L +DA    LP+      +       E+P +         
Sbjct: 577  IDIPYYDNLKQAYWGHRELMLGEDA---RLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVK 633

Query: 753  -----------GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCE 801
                       GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E
Sbjct: 634  FDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKE 693

Query: 802  FKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN- 860
              +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D    + 
Sbjct: 694  GHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 753

Query: 861  ------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNS 914
                  KK    KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS
Sbjct: 754  KKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS 813

Query: 915  FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVA 974
            +   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ 
Sbjct: 814  YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLG 873

Query: 975  PHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLN 1034
            PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LN
Sbjct: 874  PHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLN 932

Query: 1035 IVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVL 1091
            I+M L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L  EGHRVL
Sbjct: 933  IMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVL 992

Query: 1092 IFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRS 1150
            IFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+
Sbjct: 993  IFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRA 1050

Query: 1151 CGLGINLATADTVIIYDSDFNPHADIQA-------------------------------- 1178
             GLGINLATADTVIIYDSD+NPH DIQ                                 
Sbjct: 1051 GGLGINLATADTVIIYDSDWNPHNDIQVCDPLALTSQQGPAFSLGQDPANLHTLVAMSLV 1110

Query: 1179 ---------MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----NKS 1224
                     + R  + GQ+K++++YR V RASVEERI Q+AK+K+ML  L V     +KS
Sbjct: 1111 GGAPSPVELLPRGVQGGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKS 1170

Query: 1225 GS--QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGL---- 1278
            GS  ++E++DIL++GTEELF D       D+    +  +  V  +      +GG L    
Sbjct: 1171 GSMTKQELDDILKFGTEELFKD-------DVEGMMSQGQRPVTPIPDVQSSKGGALAASA 1223

Query: 1279 ---------GDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSV 1329
                     GD   +K  E S+ I +D+ AI++LLDR+   +  T+L      N+ L S 
Sbjct: 1224 KKKHGSTPPGD---NKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQN---MNEYLSSF 1277

Query: 1330 KATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIEENEWDRLLR 1379
            K  ++   EE   ++ E  +            ++EEN    ++ + W++LLR
Sbjct: 1278 KVAQYVVREEDGVEEVEREII-----------KQEEN----VDPDYWEKLLR 1314



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 6/55 (10%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C
Sbjct: 355 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 409


>gi|417414010|gb|JAA53313.1| Putative chromatin remodeling complex wstf-iswi small subunit,
            partial [Desmodus rotundus]
          Length = 1916

 Score =  537 bits (1384), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 334/786 (42%), Positives = 449/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 546  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 605

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 606  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 664

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 665  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 720

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 721  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 780

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 781  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 840

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 841  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 900

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 901  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 960

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 961  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1019

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1020 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 1079

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 1080 TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 1137

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+A   +M
Sbjct: 1138 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAXXXMM 1197

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1198 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1241

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1242 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1283

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1284 FKVAQY 1289



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 449 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 498



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 367 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 424


>gi|196008026|ref|XP_002113879.1| hypothetical protein TRIADDRAFT_27056 [Trichoplax adhaerens]
 gi|190584283|gb|EDV24353.1| hypothetical protein TRIADDRAFT_27056, partial [Trichoplax adhaerens]
          Length = 871

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 323/800 (40%), Positives = 456/800 (57%), Gaps = 125/800 (15%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK--------------YGTTVI---- 654
            EF VKW  +S    SWI + Q ++        Y  K              YGT+      
Sbjct: 78   EFFVKWKDRSYWECSWISQLQFEIHHPIMHRIYFRKNSSKLPPPLDDESIYGTSATVKGK 137

Query: 655  -----------NICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD----- 698
                       N     W Q QR+I  R   +   +  +KW  LPYD C+WE        
Sbjct: 138  NGENLEEKYYKNGVRPEWLQVQRIIDDRIISEEETDYLIKWKDLPYDVCSWESARNVTYI 197

Query: 699  ---EPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALT--------EQ 747
               E ++++Y        +++  TL K   + +          S+I  +         EQ
Sbjct: 198  LTMEDSIKQYHER-----KYDYLTLTKKTEQTQ----SDSADVSDIFTIISSLRRKYDEQ 248

Query: 748  PEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAK 805
            P+ +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT+ A +F++SL+ E   K
Sbjct: 249  PDFISKTGGTLHAYQLEGLNWLRFSWAEETDTILADEMGLGKTIQAISFLNSLFMENHCK 308

Query: 806  LPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN----- 860
             P L+ VPLST+ NW  EF +WAPNL VV Y G    R +IR++E++  +  +       
Sbjct: 309  GPFLISVPLSTVVNWEREFEMWAPNLYVVSYVGDKDCRKVIREHEFYRDEQSDSKGNKAV 368

Query: 861  --KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQ 918
              KK S  KF+VLLT+YE+I  D+  L+ + W+VL+VDE HRLKN+ SK F +L+S+   
Sbjct: 369  KPKKKSFLKFHVLLTSYELITIDAPILQSIDWKVLIVDEAHRLKNNQSKFFRVLSSYKLG 428

Query: 919  HRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHML 978
            +++LLTGTPLQNN+ E++NLLNFL P  F S   F  KF D++   ++++L +L+ PH+L
Sbjct: 429  YKLLLTGTPLQNNLEELWNLLNFLSPDRFNSWQDFSMKFEDISKEDQIKKLNELLGPHLL 488

Query: 979  RRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQ 1038
            RR+K D M+ IP K+E +V ++L+S+Q  YY+ +LT+N++ L +  +G    S+ NIVM+
Sbjct: 489  RRMKADVMKGIPEKSEVIVRIDLTSMQKTYYKYILTRNFEALNS--RGNKHVSLSNIVME 546

Query: 1039 LRKVCNHPYLIPGTEPDSGS-VEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQ 1095
            L+K CNHPYLIP    D+ + ++  + +   ++A  KL +L  MLK L + G+RVLIFSQ
Sbjct: 547  LKKCCNHPYLIPSASEDAPTNIDGTYHLSPLVQACGKLIVLEKMLKKLKETGNRVLIFSQ 606

Query: 1096 MTKLLDILEDY---LNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSC 1151
            MTK+LDILED+   LN E     YER+DGS S  +RQA I +FN  + ++F FLLSTR+ 
Sbjct: 607  MTKMLDILEDFLDGLNYE-----YERIDGSTSGNERQALIDKFNAPNATQFCFLLSTRAG 661

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQS ++++YR V R SVEERI Q+AK
Sbjct: 662  GLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQSNKVMIYRFVTRFSVEERITQVAK 721

Query: 1212 KKLMLDQLFV------NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEA 1263
            KK+ML  L V      ++SG  +++E++DIL++GT+ELFND                   
Sbjct: 722  KKMMLTHLIVRPGLGSSQSGALTKQELDDILKFGTKELFNDEDS---------------- 765

Query: 1264 VRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEN 1323
                               + K    S  I +D+ AI  LLDRS  Q G   + + DL N
Sbjct: 766  -------------------ESKTPSKSRLIDYDDKAIEDLLDRS--QKG---MEQKDLSN 801

Query: 1324 DMLGSVKATEWNEETTEDQA 1343
            + L S K   +  +  +DQ 
Sbjct: 802  EFLSSFKVASYRLKDKQDQV 821



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 27/42 (64%), Positives = 34/42 (80%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG LLCCDSCP +YHL+CL+PPL+ IP G W+CP+C
Sbjct: 3   CHVCKDGGQLLCCDSCPLSYHLRCLNPPLEDIPEGDWRCPRC 44


>gi|110777198|ref|XP_624414.2| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
            [Apis mellifera]
          Length = 1966

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 317/719 (44%), Positives = 417/719 (57%), Gaps = 93/719 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGT-------TVINICDER----- 660
            EF VKW   S  H  WI E QL V       NY  KY           ++  D R     
Sbjct: 515  EFFVKWADMSYWHCDWITELQLDVFHPLMFRNYSRKYDMDEPPKLEEPLDESDSRVKRLK 574

Query: 661  -------------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE 695
                                     W    RVI+ R S+DG     VKW  L YD+ TWE
Sbjct: 575  EQDGATNRDEYNLEERFYRYGVRPEWLVVHRVINHRLSRDGRATYLVKWRELGYDQATWE 634

Query: 696  KLDE------PALEKYSHL-----------------------TDLFVQFERQTLKKDASE 726
               E       A+E Y  L                       T   +  E +T K+    
Sbjct: 635  DEHEDIPGLKQAIEYYLDLRAANCCDGSSSRKGKKGKGKKSKTRELIDDEERTPKRYTPP 694

Query: 727  DELPRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
             + P    D ++        QPE L   G  L P+QLE LNWLR  W +  + ILADEMG
Sbjct: 695  PDKP--TTDLKKK----YERQPEYLDQTGMQLHPYQLEGLNWLRYSWGQGIDTILADEMG 748

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKT+    F+ SLY E   K P LV VPLST+ NW  EF  WAP+   V Y G   +R 
Sbjct: 749  LGKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDKDSRI 808

Query: 845  IIRQ----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
            +IR+    +E  A      +K +++  KFNVLLT+YE+I  DS+ L  + W VLVVDE H
Sbjct: 809  VIRENELSFEEGAVRGGRASKIRSNQIKFNVLLTSYELISIDSACLGSIDWAVLVVDEAH 868

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLK++ SK F LL S++  +++LLTGTPLQNN+ E+++LLNFL    F  L++F+ +F D
Sbjct: 869  RLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQNEFAD 928

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++  ++V++L +L+ PHMLRRLK D ++N+P K+E +V VELS +Q +YY+ +LT+N++ 
Sbjct: 929  ISKEEQVKKLHELLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEA 988

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE---PDSGSVEFLHEMRIKASAKLTLL 1076
            L   G G  Q S+LNI+M L+K CNHPYL P      P + +  +     IKA+ KL LL
Sbjct: 989  LNPKGGG-QQVSLLNIMMDLKKCCNHPYLFPAASQEAPTAPNGSYETSALIKAAGKLVLL 1047

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              MLK L  +GHRVLIFSQMTK+LDILEDYL  E G K YER+DG+++   RQ AI RFN
Sbjct: 1048 SKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGE-GYK-YERIDGNITGAQRQEAIDRFN 1105

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1106 APGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1165

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGTEELFNDSPG 1247
             V R SVEER+ Q+AK+K+ML  L V         + S++E++DILR+GTEELF +  G
Sbjct: 1166 FVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFSKQELDDILRFGTEELFKEEEG 1224



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C IC  GG LLCCDSC   YH  CL+PPL  IP+G W+CP+C+
Sbjct: 432 CRICKDGGELLCCDSCTSAYHTHCLNPPLSEIPDGDWKCPRCS 474



 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CPR YHL CL+P L+  P GKW CP C
Sbjct: 372 CEVCQQGGEIILCDTCPRAYHLVCLEPELEETPEGKWSCPHC 413


>gi|74149099|dbj|BAE32198.1| unnamed protein product [Mus musculus]
          Length = 895

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 337/786 (42%), Positives = 452/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 149  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 208

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 209  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 267

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 268  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 323

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 324  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 383

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 384  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 443

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 444  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 503

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 504  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 563

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 564  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 622

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 623  KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 682

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 683  TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 740

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AKKK+M
Sbjct: 741  NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMM 800

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 801  LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 844

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 845  ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 886

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 887  FKVAQY 892



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 59  CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 101


>gi|340726708|ref|XP_003401695.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein Mi-2 homolog [Bombus terrestris]
          Length = 1974

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 320/737 (43%), Positives = 427/737 (57%), Gaps = 95/737 (12%)

Query: 595  QEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGT--- 651
            +EP+ +++A  + +    EF VKW   S  H  WI E QL V       NY  KY     
Sbjct: 508  EEPSTSKAAPKQRRI--REFFVKWADMSYWHCDWITELQLDVFHPLMFRNYSRKYDMDEP 565

Query: 652  ----TVINICDER------------------------------WKQPQRVISLRSSKDGT 677
                  ++  D R                              W    RVI+ R S+DG 
Sbjct: 566  PKLEEPLDESDSRVKRLKEQDVATNRDEYNLEERFYRYGVRPEWLVVHRVINHRLSRDGR 625

Query: 678  REAFVKWTGLPYDECTWEKLDE------PALEKYSHL----------------------- 708
                VKW  L YD+ TWE   E       A+E Y  L                       
Sbjct: 626  ATYLVKWRELGYDQATWEDEHEDIPGLKQAIEYYLDLRAANCCDGSSSRKGKKGKGKKSK 685

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNW 766
            T   +  E +T K+     + P    D ++        QPE L   G  L P+QLE LNW
Sbjct: 686  TRELIDDEERTPKRYTPPPDKP--TTDLKKK----YERQPEYLDQTGMQLHPYQLEGLNW 739

Query: 767  LRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFAL 826
            LR  W +  + ILADEMGLGKT+    F+ SLY E   K P LV VPLST+ NW  EF  
Sbjct: 740  LRYSWGQGIDTILADEMGLGKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFET 799

Query: 827  WAPNLNVVEYHGCAKARAIIRQ----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILAD 881
            WAP+   V Y G   +R +IR+    +E  A      +K +++  KFNVLLT+YE+I  D
Sbjct: 800  WAPDFYCVTYVGDKDSRIVIRENELSFEEGAVRGGRASKIRSNQIKFNVLLTSYELISID 859

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
            S+ L  + W VLVVDE HRLK++ SK F LL S++  +++LLTGTPLQNN+ E+++LLNF
Sbjct: 860  SACLGSIDWAVLVVDEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNF 919

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L    F  L++F+ +F D++  ++V++L +L+ PHMLRRLK D ++N+P K+E +V VEL
Sbjct: 920  LCRDKFNDLAAFQNEFADISKEEQVKKLHELLGPHMLRRLKADVLKNMPSKSEFIVRVEL 979

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE---PDSGS 1058
            S +Q +YY+ +LT+N++ L   G G  Q S+LNI+M L+K CNHPYL P      P + +
Sbjct: 980  SPMQKKYYKYILTRNFEALNPKGGG-QQVSLLNIMMDLKKCCNHPYLFPAASQEAPTAPN 1038

Query: 1059 VEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
              +     IKA+ KL LL  MLK L  +GHRVLIFSQMTK+LDILEDYL  E G K YER
Sbjct: 1039 GSYETSALIKAAGKLVLLSKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGE-GYK-YER 1096

Query: 1119 VDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DG+++   RQ AI RFN   + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQ
Sbjct: 1097 IDGNITGAQRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ 1156

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEV 1230
            A +RAHRIGQ+ ++++YR V R SVEER+ Q+AK+K+ML  L V         + S++E+
Sbjct: 1157 AFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFSKQEL 1216

Query: 1231 EDILRWGTEELFNDSPG 1247
            +DILR+GTEELF +  G
Sbjct: 1217 DDILRFGTEELFKEEEG 1233



 Score = 75.1 bits (183), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C IC  GG LLCCDSC   YH  CL+PPL  IP+G W+CP+C+
Sbjct: 441 CRICKDGGELLCCDSCTSAYHTHCLNPPLSEIPDGDWKCPRCS 483



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CPR YHL CL+P L+  P GKW CP C
Sbjct: 381 CEVCQQGGEIILCDTCPRAYHLVCLEPELEETPEGKWSCPHC 422


>gi|350424653|ref|XP_003493868.1| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
            [Bombus impatiens]
          Length = 1965

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 320/737 (43%), Positives = 427/737 (57%), Gaps = 95/737 (12%)

Query: 595  QEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGT--- 651
            +EP+ +++A  + +    EF VKW   S  H  WI E QL V       NY  KY     
Sbjct: 499  EEPSTSKAAPKQRRI--REFFVKWADMSYWHCDWITELQLDVFHPLMFRNYSRKYDMDEP 556

Query: 652  ----TVINICDER------------------------------WKQPQRVISLRSSKDGT 677
                  ++  D R                              W    RVI+ R S+DG 
Sbjct: 557  PKLEEPLDESDSRVKRLKEQDVATNRDEYNLEERFYRYGVRPEWLVVHRVINHRLSRDGR 616

Query: 678  REAFVKWTGLPYDECTWEKLDE------PALEKYSHL----------------------- 708
                VKW  L YD+ TWE   E       A+E Y  L                       
Sbjct: 617  ATYLVKWRELGYDQATWEDEHEDIPGLKQAIEYYLDLRAANCCDGSSSRKGKKGKGKKSK 676

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNW 766
            T   +  E +T K+     + P    D ++        QPE L   G  L P+QLE LNW
Sbjct: 677  TRELIDDEERTPKRYTPPPDKP--TTDLKKK----YERQPEYLDQTGMQLHPYQLEGLNW 730

Query: 767  LRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFAL 826
            LR  W +  + ILADEMGLGKT+    F+ SLY E   K P LV VPLST+ NW  EF  
Sbjct: 731  LRYSWGQGIDTILADEMGLGKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFET 790

Query: 827  WAPNLNVVEYHGCAKARAIIRQ----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILAD 881
            WAP+   V Y G   +R +IR+    +E  A      +K +++  KFNVLLT+YE+I  D
Sbjct: 791  WAPDFYCVTYVGDKDSRIVIRENELSFEEGAVRGGRASKIRSNQIKFNVLLTSYELISID 850

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
            S+ L  + W VLVVDE HRLK++ SK F LL S++  +++LLTGTPLQNN+ E+++LLNF
Sbjct: 851  SACLGSIDWAVLVVDEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNF 910

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L    F  L++F+ +F D++  ++V++L +L+ PHMLRRLK D ++N+P K+E +V VEL
Sbjct: 911  LCRDKFNDLAAFQNEFADISKEEQVKKLHELLGPHMLRRLKADVLKNMPSKSEFIVRVEL 970

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE---PDSGS 1058
            S +Q +YY+ +LT+N++ L   G G  Q S+LNI+M L+K CNHPYL P      P + +
Sbjct: 971  SPMQKKYYKYILTRNFEALNPKGGG-QQVSLLNIMMDLKKCCNHPYLFPAASQEAPTAPN 1029

Query: 1059 VEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
              +     IKA+ KL LL  MLK L  +GHRVLIFSQMTK+LDILEDYL  E G K YER
Sbjct: 1030 GSYETSALIKAAGKLVLLSKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGE-GYK-YER 1087

Query: 1119 VDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DG+++   RQ AI RFN   + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQ
Sbjct: 1088 IDGNITGAQRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ 1147

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEV 1230
            A +RAHRIGQ+ ++++YR V R SVEER+ Q+AK+K+ML  L V         + S++E+
Sbjct: 1148 AFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFSKQEL 1207

Query: 1231 EDILRWGTEELFNDSPG 1247
            +DILR+GTEELF +  G
Sbjct: 1208 DDILRFGTEELFKEEEG 1224



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C IC  GG LLCCDSC   YH  CL+PPL  IP+G W+CP+C+
Sbjct: 432 CRICKDGGELLCCDSCTSAYHTHCLNPPLSEIPDGDWKCPRCS 474



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CPR YHL CL+P L+  P GKW CP C
Sbjct: 372 CEVCQQGGEIILCDTCPRAYHLVCLEPELEETPEGKWSCPHC 413


>gi|417413954|gb|JAA53286.1| Putative chromatin remodeling complex wstf-iswi small subunit,
            partial [Desmodus rotundus]
          Length = 1766

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 334/786 (42%), Positives = 449/786 (57%), Gaps = 106/786 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 396  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK 455

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 456  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDV-E 514

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 515  IQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 570

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 571  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 630

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------PDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D         + 
Sbjct: 631  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASR 690

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S QH
Sbjct: 691  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQH 750

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 751  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 810

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 811  RLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 869

Query: 1040 RKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 870  KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQM 929

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGI
Sbjct: 930  TKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGI 987

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+A   +M
Sbjct: 988  NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAXXXMM 1047

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1048 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1091

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1092 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1133

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1134 FKVAQY 1139



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 71  NDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +D +   C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 299 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 348



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 33/48 (68%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           C +C  GG ++ CD+CPR YH+ CLDP +++ P GKW CP C ++  Q
Sbjct: 227 CEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ 274


>gi|380020464|ref|XP_003694103.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein Mi-2 homolog [Apis florea]
          Length = 1964

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 317/719 (44%), Positives = 417/719 (57%), Gaps = 93/719 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGT-------TVINICDER----- 660
            EF VKW   S  H  WI E QL V       NY  KY           ++  D R     
Sbjct: 514  EFFVKWADMSYWHCDWITELQLDVFHPLMFRNYSRKYDMDEPPKLEEPLDESDSRVKRLK 573

Query: 661  -------------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE 695
                                     W    RVI+ R S+DG     VKW  L YD+ TWE
Sbjct: 574  EQDGATNRDEYNLEERFYRYGVRPEWLVVHRVINHRLSRDGRATYLVKWRELGYDQATWE 633

Query: 696  KLDE------PALEKYSHL-----------------------TDLFVQFERQTLKKDASE 726
               E       A+E Y  L                       T   +  E +T K+    
Sbjct: 634  DEHEDIPGLKQAIEYYLDLRAANCCDGSSSRKGKKGKGKKSKTRELIDDEERTPKRYTPP 693

Query: 727  DELPRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
             + P    D ++        QPE L   G  L P+QLE LNWLR  W +  + ILADEMG
Sbjct: 694  PDKP--TTDLKKK----YERQPEYLDQTGMQLHPYQLEGLNWLRYSWGQGIDTILADEMG 747

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKT+    F+ SLY E   K P LV VPLST+ NW  EF  WAP+   V Y G   +R 
Sbjct: 748  LGKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDKDSRI 807

Query: 845  IIRQ----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
            +IR+    +E  A      +K +++  KFNVLLT+YE+I  DS+ L  + W VLVVDE H
Sbjct: 808  VIRENELSFEEGAVRGGRASKIRSNQIKFNVLLTSYELISIDSACLGSIDWAVLVVDEAH 867

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLK++ SK F LL S++  +++LLTGTPLQNN+ E+++LLNFL    F  L++F+ +F D
Sbjct: 868  RLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQNEFAD 927

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++  ++V++L +L+ PHMLRRLK D ++N+P K+E +V VELS +Q +YY+ +LT+N++ 
Sbjct: 928  ISKEEQVKKLHELLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEA 987

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE---PDSGSVEFLHEMRIKASAKLTLL 1076
            L   G G  Q S+LNI+M L+K CNHPYL P      P + +  +     IKA+ KL LL
Sbjct: 988  LNPKGGG-QQVSLLNIMMDLKKCCNHPYLFPAASQEAPTAPNGSYETSALIKAAGKLVLL 1046

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              MLK L  +GHRVLIFSQMTK+LDILEDYL  E G K YER+DG+++   RQ AI RFN
Sbjct: 1047 SKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGE-GYK-YERIDGNITGAQRQEAIDRFN 1104

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1105 APGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1164

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGTEELFNDSPG 1247
             V R SVEER+ Q+AK+K+ML  L V         + S++E++DILR+GTEELF +  G
Sbjct: 1165 FVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFSKQELDDILRFGTEELFKEEEG 1223



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 31/43 (72%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C IC  GG LLCCDSC   YH  CL+PPL  IP+G W+CP+C+
Sbjct: 431 CRICKDGGELLCCDSCTSAYHTHCLNPPLSEIPDGDWKCPRCS 473



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CPR YHL CL+P L+  P GKW CP C
Sbjct: 371 CEVCQQGGEIILCDTCPRAYHLVCLEPELEETPEGKWSCPHC 412


>gi|52545542|emb|CAH56404.1| hypothetical protein [Homo sapiens]
          Length = 1059

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 318/739 (43%), Positives = 442/739 (59%), Gaps = 80/739 (10%)

Query: 689  YDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA-------------SEDELPRGKGD 735
            YD+CTWE +D+  +  Y +L   +       L +D               +D+  +    
Sbjct: 1    YDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQEKPPDT 59

Query: 736  CQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACA 793
                  V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    
Sbjct: 60   PIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIV 119

Query: 794  FISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHA 853
            F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+  
Sbjct: 120  FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSF 179

Query: 854  SDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGS 906
             D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ S
Sbjct: 180  EDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQS 239

Query: 907  KLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKV 966
            K F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++
Sbjct: 240  KFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI 299

Query: 967  EELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKG 1026
            ++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G
Sbjct: 300  KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG 359

Query: 1027 VAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVL 1083
              Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL LL  MLK L
Sbjct: 360  -NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKL 418

Query: 1084 YKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RF 1142
              EGHR+LIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F
Sbjct: 419  RDEGHRLLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQF 476

Query: 1143 VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASV 1202
             FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASV
Sbjct: 477  CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 536

Query: 1203 EERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGINGKDMGE 1255
            EERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D       D+  
Sbjct: 537  EERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD-------DVEG 589

Query: 1256 NNTSIEEAVRDLEQKHRKRGGGL-------------GDVYQDKCTEGSTKIVWDENAIAR 1302
              +  +  V  +      +GG L             GD   +K  E S+ I +D+ AI++
Sbjct: 590  MMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGD---NKDVEDSSVIHYDDAAISK 646

Query: 1303 LLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDASAENSER 1360
            LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +            +
Sbjct: 647  LLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII-----------K 692

Query: 1361 KEENAVTGIEENEWDRLLR 1379
            +EEN    ++ + W++LLR
Sbjct: 693  QEEN----VDPDYWEKLLR 707


>gi|307180140|gb|EFN68184.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
            [Camponotus floridanus]
          Length = 1960

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 320/737 (43%), Positives = 427/737 (57%), Gaps = 95/737 (12%)

Query: 595  QEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGT--- 651
            +EP+ +++A  + K    EF VKW   S  H  WI E QL V       NY  KY     
Sbjct: 497  EEPSTSKAAPKQRKM--REFFVKWADMSYWHCDWITELQLDVFHPLMYRNYYRKYDMDEP 554

Query: 652  ----TVINICDER------------------------------WKQPQRVISLRSSKDGT 677
                  ++  D R                              W    RVI+ R  +DG 
Sbjct: 555  PKLEEPLDESDSRVKRLKEQDVVTNREEYNLEERFYRYGVRPEWLVVHRVINHRLQRDGR 614

Query: 678  REAFVKWTGLPYDECTWEKLDE--PALEK-YSHLTDL----------------------- 711
                VKW  L YD+ TWE   E  P L++   +  DL                       
Sbjct: 615  ATYLVKWRELGYDQATWEDEHEDIPGLKQAIEYYLDLRAANCCDVTTSRKGKKGKGKKSK 674

Query: 712  ---FVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNW 766
                +  E +T K+     + P    D ++        QPE L   G  L P+QLE LNW
Sbjct: 675  TRELIDDEERTPKRYTPPPDKP--TTDLKKK----YERQPEYLDQTGMQLHPYQLEGLNW 728

Query: 767  LRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFAL 826
            LR  W +  + ILADEMGLGKT+    F+ SLY E   K P LV VPLST+ NW  EF  
Sbjct: 729  LRYSWGQGIDTILADEMGLGKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFET 788

Query: 827  WAPNLNVVEYHGCAKARAIIRQ----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILAD 881
            WAP+   V Y G   +R +IR+    +E  A      +K ++SS KFNVLLT+YE+I  D
Sbjct: 789  WAPDFYCVTYVGDKDSRIVIRENELSFEEGAVRSGRASKIRSSSIKFNVLLTSYELISID 848

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
            S+ L  + W VLVVDE HRLK++ SK F LL S++  +++LLTGTPLQNN+ E+++LLNF
Sbjct: 849  SACLGSIDWAVLVVDEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNF 908

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L    F  L++F+ +F D++  ++V++L +++ PHMLRRLK D ++N+P K+E +V VEL
Sbjct: 909  LCRDKFNDLAAFQNEFADISKEEQVKKLHEMLGPHMLRRLKADVLKNMPSKSEFIVRVEL 968

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE---PDSGS 1058
            S +Q +YY+ +LT+N++ L   G G  Q S+LNI+M L+K CNHPYL P      P   +
Sbjct: 969  SPMQKKYYKYILTRNFEALNPKGGG-QQVSLLNIMMDLKKCCNHPYLFPAASQEAPTGPN 1027

Query: 1059 VEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
              +     IKA+ KL LL  MLK L  +GHRVLIFSQMTK+LDILEDYL  E G K YER
Sbjct: 1028 GSYETSALIKAAGKLVLLSKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGE-GYK-YER 1085

Query: 1119 VDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DG+++   RQ AI RFN   + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQ
Sbjct: 1086 IDGNITGSQRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQ 1145

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEV 1230
            A +RAHRIGQ+ ++++YR V R SVEER+ Q+AK+K+ML  L V         + S++E+
Sbjct: 1146 AFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFSKQEL 1205

Query: 1231 EDILRWGTEELFNDSPG 1247
            +DILR+GTEELF +  G
Sbjct: 1206 DDILRFGTEELFKEEEG 1222



 Score = 74.7 bits (182), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 31/43 (72%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSC   YH  CL+PPL  IP+G W+CP+C+
Sbjct: 430 CRVCKDGGELLCCDSCTSAYHTHCLNPPLSEIPDGDWKCPRCS 472



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CPR YHL CL+P L+  P GKW C  C
Sbjct: 370 CEVCQQGGEIILCDTCPRAYHLVCLEPELEETPEGKWSCAHC 411


>gi|301616286|ref|XP_002937591.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Xenopus
            (Silurana) tropicalis]
          Length = 1906

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 313/695 (45%), Positives = 417/695 (60%), Gaps = 67/695 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            EF VKW G S  H SW  E QL++       NY+ K          YG+           
Sbjct: 505  EFFVKWAGLSYWHCSWAKELQLELYHTVMFRNYQRKNDMDDPPPYDYGSGDEEGKSEKRR 564

Query: 652  ---TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                +    +E+         W    R+++    K G     +KW  LPYD+CTWE +D 
Sbjct: 565  NKDPLYAKMEEKFYRYGIKPEWMMIHRIMNHSFDKKGDVHYLIKWKDLPYDQCTWE-IDI 623

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQPE 749
              +  Y ++   +       L +DA        K   ++ E           V   +QP 
Sbjct: 624  IDIPDYENMKQAYWDHRELMLGEDARPLRFKNKKTKDEKLEKPPLAPIVDPTVKFDKQPW 683

Query: 750  EL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLP 807
             +   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K P
Sbjct: 684  YIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGP 743

Query: 808  CLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN------- 860
             LV  PLST+ NW  EF +WAP   VV Y G   +RA+IR+ E+   D    +       
Sbjct: 744  YLVSAPLSTIINWEREFEMWAPEFYVVTYTGDKDSRAVIRENEFSFEDNAIKSGKKVFRM 803

Query: 861  KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHR 920
            KK +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS+   ++
Sbjct: 804  KKEAQIKFHVLLTSYELITIDHAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYK 863

Query: 921  VLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRR 980
            +LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ PHMLRR
Sbjct: 864  LLLTGTPLQNNLEELFHLLNFLTPERFNNLDGFLEEFADISKEDQIKKLHDLLGPHMLRR 923

Query: 981  LKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLR 1040
            LK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M L+
Sbjct: 924  LKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLNIMMDLK 982

Query: 1041 KVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMT 1097
            K CNHPYL P      P   +  +     +K+S KL LL  MLK L   GHRVLIFSQMT
Sbjct: 983  KCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLKDGGHRVLIFSQMT 1042

Query: 1098 KLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGIN 1156
            K+LD+LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+ GLGIN
Sbjct: 1043 KMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGIN 1100

Query: 1157 LATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLML 1216
            LATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AK+K+ML
Sbjct: 1101 LATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMML 1160

Query: 1217 DQLFV-----NKSGS--QKEVEDILRWGTEELFND 1244
              L V     +KSGS  ++E++DIL++GTEELF D
Sbjct: 1161 THLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD 1195



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 417 CRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCT 459



 Score = 75.1 bits (183), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 4/61 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLK 127
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  Q +
Sbjct: 332 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWE 391

Query: 128 P 128
           P
Sbjct: 392 P 392


>gi|47206539|emb|CAF92235.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 993

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 345/866 (39%), Positives = 477/866 (55%), Gaps = 139/866 (16%)

Query: 603  AQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGTT 652
            A +KG+    EF VKW G S  H SW+ E QL++       NY+ K          YG+ 
Sbjct: 83   APLKGRP-QREFFVKWAGLSYWHCSWVSELQLELYHTVMYRNYQRKNDMDEPPPYDYGSG 141

Query: 653  VINICDER-----------------------WKQPQRVISLRSSKDGTREAFVKWTGLPY 689
               +  E+                       W    R+++    KDG     +KW  +PY
Sbjct: 142  EEELNSEKRKSIDPQYAMMEERFYRYGIKPEWMVIHRILNHSLDKDGDVHYLIKWRDMPY 201

Query: 690  DECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQ----------- 738
            D+CTWE ++  A+  Y      +     Q L +D     +  GK   ++           
Sbjct: 202  DQCTWE-MERFAIPDYDRHQACYWDHREQILGEDQRPLMVLEGKTLKERYPKREVPPDAP 260

Query: 739  --SEIVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAF 794
                 +    QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F
Sbjct: 261  IIDPTIKFEHQPWYINATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVF 320

Query: 795  ISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHAS 854
            + SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G   +RAIIR+ E+   
Sbjct: 321  LYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAIIRENEFTFE 380

Query: 855  DPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSK 907
            D    +       KK +  KF++LLT+YE+I  D + L  V W  LVVDE HRLKN+ SK
Sbjct: 381  DSAVKSGRKVFRMKKDTPIKFHILLTSYELITIDQAILGSVTWACLVVDEAHRLKNNQSK 440

Query: 908  LFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVE 967
             F +LN +   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   +++
Sbjct: 441  FFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIK 500

Query: 968  ELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGV 1027
            +L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G 
Sbjct: 501  KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGG- 559

Query: 1028 AQQSMLNIVMQLRKVCNHPYLIPGTE--------------------------PDSGSVEF 1061
             Q S+LNI+M L+K CNHPYL P                             P   +  +
Sbjct: 560  NQVSLLNIMMDLKKCCNHPYLFPVAAVVRTSCPPLSFHQKHTSAYHVPFQEAPVLPNGSY 619

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
               + +K+S KLTLL  MLK L  EGHRVLIFSQMTK+LD+LED+L  EF    YER+DG
Sbjct: 620  DGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFL--EFEGYKYERIDG 677

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             ++ G RQ AI RFN   ++ F FLLSTR+ GLGINLA+ADTVIIYDSD+NPH DIQA +
Sbjct: 678  GITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHNDIQAFS 737

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDI 1233
            RAHRIGQ+K++++YR V R SVEERI Q+AK+K+ML  L V     +K+G  S++E++DI
Sbjct: 738  RAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELDDI 797

Query: 1234 LRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKI 1293
            L++GTEELF D                 EA R            +GD   +K  E    I
Sbjct: 798  LKFGTEELFKDE---------------MEAAR-----------AVGD---NKDGEEGNVI 828

Query: 1294 VWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEWNEETTEDQAESPVAAVDDA 1353
             +D++AI++LLDRS   +  T++      N+ L S K  ++  +  E + E     +   
Sbjct: 829  HYDDDAISKLLDRSQDATEDTEIQN---MNEYLSSFKVAQYVVKEEEGEEEVEREII--- 882

Query: 1354 SAENSERKEENAVTGIEENEWDRLLR 1379
                  ++EEN    ++ + W++LLR
Sbjct: 883  ------KQEEN----VDPDYWEKLLR 898



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 26/42 (61%), Positives = 33/42 (78%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+C
Sbjct: 4   CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 45


>gi|52545633|emb|CAH56377.1| hypothetical protein [Homo sapiens]
          Length = 1061

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 305/654 (46%), Positives = 418/654 (63%), Gaps = 53/654 (8%)

Query: 753  GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLV 812
            GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K P LV  
Sbjct: 72   GGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSA 131

Query: 813  PLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN-------KKTSS 865
            PLST+ NW  EF +WAP+  VV Y G  ++R++IR+ E+   D    +       KK   
Sbjct: 132  PLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQ 191

Query: 866  YKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTG 925
             KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LNS+   +++LLTG
Sbjct: 192  IKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTG 251

Query: 926  TPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDA 985
            TPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ PHMLRRLK D 
Sbjct: 252  TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADV 311

Query: 986  MQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNH 1045
             +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M L+K CNH
Sbjct: 312  FKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG-NQVSLLNIMMDLKKCCNH 370

Query: 1046 PYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDI 1102
            PYL P      P   +  +     +K+S KL LL  MLK L  EGHR+LIFSQMTK+LD+
Sbjct: 371  PYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRLLIFSQMTKMLDL 430

Query: 1103 LEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATAD 1161
            LED+L  E+    YER+DG ++ G RQ AI RFN   + +F FLLSTR+ GLGINLATAD
Sbjct: 431  LEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATAD 488

Query: 1162 TVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            TVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q+AK+K+ML  L V
Sbjct: 489  TVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 548

Query: 1222 -----NKSGS--QKEVEDILRWGTEELFNDSPGING-KDMGENNTSIEEAVR----DLEQ 1269
                 +KSGS  ++E++DIL++GTEELF D   + G    G+  T I +       +L  
Sbjct: 549  RPGLGSKSGSMTKQELDDILKFGTEELFKDD--VEGMMSQGQRVTPIPDVQSSKGGNLAA 606

Query: 1270 KHRKRGGGL--GDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLG 1327
              +K+ G    GD   +K  E S+ I +D+ AI++LLDR+   +  T+L      N+ L 
Sbjct: 607  SAKKKHGSTPPGD---NKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQN---MNEYLS 660

Query: 1328 SVKATEW--NEETTEDQAESPVAAVDDASAENSERKEENAVTGIEENEWDRLLR 1379
            S K  ++   EE   ++ E  +            ++EEN    ++ + W++LLR
Sbjct: 661  SFKVAQYVVREEDGVEEVEREII-----------KQEEN----VDPDYWEKLLR 699


>gi|390367174|ref|XP_003731194.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like
            [Strongylocentrotus purpuratus]
          Length = 2202

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 309/715 (43%), Positives = 423/715 (59%), Gaps = 87/715 (12%)

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE------KLDEPALEKYSHLTDL-FV 713
            W Q  R+I+ ++ + G    F+KW  LPYD  TWE      K+ E   ++  +  DL  +
Sbjct: 659  WMQIHRIINSKTDRYGNISFFIKWKILPYDHSTWEEEEFVRKIPE-GNKQIQYFWDLKAL 717

Query: 714  QFERQTLKKDASEDELPRGKGDCQQSEIVALTE----------QPEELK--GGALFPHQL 761
             F     KK +          + +Q  I  L            QP+ +   GG L  +QL
Sbjct: 718  MFGEPLKKKKSKGKNKKGKNQEREQRAIQKLEPTTDLRKKFEVQPQYIDACGGKLHDYQL 777

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
            E LNWLR  WH     ILADEMGLGKT+   AF+ SLY E  +K P L+  PLST+ NW 
Sbjct: 778  EGLNWLRYSWHNDICTILADEMGLGKTIQTIAFLYSLYKEGHSKGPFLISAPLSTIINWE 837

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYK--------FNVLLT 873
             EF  WAP+  VV Y G   +RAIIR+ E+   D D +     +YK        F+VLLT
Sbjct: 838  REFEFWAPDFYVVTYTGDKDSRAIIRENEFSFED-DAVKGGKKAYKMRQGSLVKFHVLLT 896

Query: 874  TYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIG 933
            +YE+I  D+  L+ V W+VLVVDE HRLKN+ S+ F +L+ ++ + R+LLTGTPLQNN+ 
Sbjct: 897  SYELISIDAGTLQSVNWDVLVVDEAHRLKNNQSRFFRILSGYNIRFRLLLTGTPLQNNLE 956

Query: 934  EMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKT 993
            E+++LLNF+ P  F +L  F  +F D++   ++++L  ++ PHMLRRLK D ++ +P K+
Sbjct: 957  ELFHLLNFMSPDEFNNLQHFLAEFADISKEDQIKKLHDMLGPHMLRRLKADVLKGMPSKS 1016

Query: 994  ERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE 1053
            E +V VELS +Q +YY+ +LT+N+Q L     G    S+LNI+M L+K CNHPYL P   
Sbjct: 1017 EFIVRVELSPLQKKYYKYILTRNFQALNTKAAGGGSVSLLNIMMDLKKCCNHPYLFPTAA 1076

Query: 1054 PDS-----GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
             D+     G+ E +    IK+  KL LL  ML++L K+ HRVLIFSQMT++LD+LED+L 
Sbjct: 1077 ADAQRLQNGAFEVVS--LIKSCGKLVLLCKMLRMLKKDNHRVLIFSQMTRMLDLLEDFLE 1134

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYD 1167
             E G K YER+DG V+ G RQ AI RFN   + +FVFLLSTR+ GLGINLATADTVIIYD
Sbjct: 1135 GE-GYK-YERIDGGVTGGLRQEAIDRFNAPGAEQFVFLLSTRAGGLGINLATADTVIIYD 1192

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKS-GS 1226
            SD+NPH DIQA +RAHRIGQS ++++YR V RASVEERI Q+AKKK+ML  L V    GS
Sbjct: 1193 SDWNPHNDIQAFSRAHRIGQSNKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGS 1252

Query: 1227 Q-------KEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLG 1279
            Q       +E+++IL++GTE+LF D  G                                
Sbjct: 1253 QAKGAMSKRELDEILKFGTEQLFKDDEGAED----------------------------- 1283

Query: 1280 DVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW 1334
                   +EG+  I WD+  +  LLDR+  + G+ +  + D+ N+ L S K   +
Sbjct: 1284 -------SEGT--IQWDDKTVWDLLDRT--KEGNVEEPKDDMSNEYLQSFKVASY 1327



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCC+ CP +YH+ CL+PPL++IP+  W CP+C 
Sbjct: 410 CRVCHDGGELLCCEQCPSSYHIFCLNPPLRKIPDDDWVCPRCA 452



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 4/52 (7%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           DGY  +    C +C  GG ++ CD+CP+ +HL CLDP L+  P GKW CP C
Sbjct: 341 DGYETDHQDYCEVCQQGGEIILCDTCPKAFHLVCLDPELETAPEGKWSCPNC 392


>gi|390465301|ref|XP_003733383.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 5 [Callithrix jacchus]
          Length = 1887

 Score =  531 bits (1367), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 345/865 (39%), Positives = 480/865 (55%), Gaps = 115/865 (13%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP++     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 479  EPSLPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 537

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    RV++    K G     +
Sbjct: 538  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKAEWMMIHRVLNHSFDKKGDVHYLI 597

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA-------------SEDEL 729
            KW  LPYD+CTWE +D+  +  Y +L   +       L +D+              +D+ 
Sbjct: 598  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDSRLPKRLLKKGKKLRDDKQ 656

Query: 730  PRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
             +          V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGK
Sbjct: 657  EKPPDTPMVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGK 716

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR
Sbjct: 717  TVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 776

Query: 848  QYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            + E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE HR
Sbjct: 777  ENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHR 836

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN+ SK F +LNS+   +++LLTGT LQ      + L NFL P  F  +  F E+F D+
Sbjct: 837  LKNNQSKFFRVLNSYKIDYKLLLTGTLLQXXXXVPFXL-NFLIPERFQGIHGFLEEFADI 895

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
            +   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L
Sbjct: 896  SKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL 955

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE---PDSGSVEFLHEMRIKASAKLTLLH 1077
             + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL LL 
Sbjct: 956  NSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQ 1014

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN 
Sbjct: 1015 KMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNA 1072

Query: 1138 DKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
              ++ F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR 
Sbjct: 1073 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1132

Query: 1197 VVRASVEERILQLAKKKLMLDQLFV-----NKSGS--QKEVEDILRWGTEELFNDSPGIN 1249
            V RASVEERI Q+AK+K+ML  L V     +KSGS  ++E++DIL++GTEELF D     
Sbjct: 1133 VTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKD----- 1187

Query: 1250 GKDMGENNTSIEEAVRDLEQKHRKRGGGL-------------GDVYQDKCTEGSTKIVWD 1296
              D+    +  +  V  +      +GG L             GD   +K  E S+ I +D
Sbjct: 1188 --DVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGD---NKDVEDSSVIHYD 1242

Query: 1297 ENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW--NEETTEDQAESPVAAVDDAS 1354
            + AI++LLDR+   +  T+L      N+ L S K  ++   EE   ++ E  +       
Sbjct: 1243 DAAISKLLDRNQDATDDTELQN---MNEYLSSFKVAQYVVREEDGVEEVEREII------ 1293

Query: 1355 AENSERKEENAVTGIEENEWDRLLR 1379
                 ++EEN    ++ + W++LLR
Sbjct: 1294 -----KQEEN----VDPDYWEKLLR 1309



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 404 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 446



 Score = 75.1 bits (183), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 318 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 377

Query: 125 QLKP 128
           Q +P
Sbjct: 378 QWEP 381


>gi|340380649|ref|XP_003388834.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 homolog
            [Amphimedon queenslandica]
          Length = 1451

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 317/783 (40%), Positives = 440/783 (56%), Gaps = 104/783 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVI-----------------N 655
            E+ VKW GKS    SW+ E+ L V     L  Y  K+                      +
Sbjct: 34   EYFVKWEGKSYWECSWVLETGLDVHQGNTLRPYMRKHNMETPPPLELPAHLERRRRRRSS 93

Query: 656  ICDER----------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
              DE+                W   QRVI+ ++SK       VKW  LPYD+ TWE LDE
Sbjct: 94   HYDEKMEEKELVLLKAGVHPEWLIIQRVINSKTSKKFGTLYLVKWKDLPYDKATWEALDE 153

Query: 700  PA-LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIV----ALTEQPEELK-- 752
             + +   +     + +  R    ++A      + +   +Q + V      T QP+ +   
Sbjct: 154  SSHIRGAAAAIKQYEEMNRAKYHQEAPVVTKKKKQKTPKQPKPVDPKKKYTVQPDYISQT 213

Query: 753  GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLV 812
            GG L P+QLE +NW+R  W ++ N ILADEMGLGKT+   +F+ SL  E     P L+  
Sbjct: 214  GGTLHPYQLEGINWIRFSWAQNTNTILADEMGLGKTIQTISFLYSLVKEGHTNGPFLISA 273

Query: 813  PLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWH--------ASDPDNLNKKTS 864
            PLST+ NW  EF  WAP+L VV YHG    RAIIR++E+          S      KK  
Sbjct: 274  PLSTIINWEREFEFWAPDLYVVTYHGSKDNRAIIREHEFSFVSGAVKGTSKQLQRVKKDL 333

Query: 865  SYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLT 924
              KFNVLLT+YE +  D++ L+ + W VLVVDE HRLKN+ SK F +L+ +  ++++LLT
Sbjct: 334  PIKFNVLLTSYEYVSVDATVLQSINWAVLVVDEAHRLKNNQSKFFRVLSQYKIKYKLLLT 393

Query: 925  GTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKD 984
            GTPLQNN+ E+++LLNFL   +F SL  F+E+F D++   +V +L  ++APH+LRRLK D
Sbjct: 394  GTPLQNNLEELFHLLNFLSRDNFNSLEEFQEEFADISKEDQVSKLHDMLAPHLLRRLKAD 453

Query: 985  AMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCN 1044
             ++NIP KTE +V V+L+ +Q ++YR +LTKN++ L    KG    S++NI+M L+K  N
Sbjct: 454  VLKNIPSKTELIVRVDLAPMQKKFYRWILTKNFEKLNT--KGAKPVSLINIMMDLKKCSN 511

Query: 1045 HPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLD 1101
            HPYL P      P +    +     I +S KL +L  MLK L + GHRVLIFSQMTK+LD
Sbjct: 512  HPYLFPTAAEEAPLTAGGYYEGTALIASSGKLIVLEKMLKKLKESGHRVLIFSQMTKMLD 571

Query: 1102 ILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATA 1160
            ILED+L  E     YER+DG V+  +RQ  I RFN   + +FVFLLSTR+ GLGINLA+A
Sbjct: 572  ILEDFL--EHLSYKYERIDGGVTGSERQQCIDRFNAPGAEQFVFLLSTRAGGLGINLASA 629

Query: 1161 DTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF 1220
            DTVII+DSD+NPH D+QA +RAHRIGQ+ ++++YR V R SVEER+ ++AK+K+ML  L 
Sbjct: 630  DTVIIFDSDWNPHNDVQAFSRAHRIGQANKVMIYRFVTRNSVEERVCEVAKRKMMLTHLV 689

Query: 1221 V---------NKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKH 1271
            V           S S++E++DIL++GT++LF        KD G++               
Sbjct: 690  VRGGLGSTTNQPSLSKRELDDILKFGTQDLF--------KDQGQDG-------------- 727

Query: 1272 RKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKA 1331
                            E S  IV+D+ A+  LLDRS   SG     E  L N+ L   K 
Sbjct: 728  ----------------EESMGIVYDDKAVEALLDRSQ-GSGEDGPDENLLANEYLSQFKV 770

Query: 1332 TEW 1334
              +
Sbjct: 771  ASY 773


>gi|47211690|emb|CAF91815.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1369

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 298/613 (48%), Positives = 390/613 (63%), Gaps = 63/613 (10%)

Query: 742  VALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLY 799
            +    QPE L   GG L P+QLE LNWLR  W +  + ILADEMGLGKTV    F+ SLY
Sbjct: 551  IKFERQPEYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLY 610

Query: 800  CEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD---- 855
             E  +K P LV  PLST+ NW  EF +WAP++ VV Y G   +RA+IR+ E+   D    
Sbjct: 611  KEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEDNAIR 670

Query: 856  ---PDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLL 912
                 +  KK +S KF+VLLT+YE+I  D + L  V W  LVVDE HRLKN+ SK F +L
Sbjct: 671  GGKKASRMKKDTSIKFHVLLTSYELITIDMAVLGSVNWACLVVDEAHRLKNNQSKFFRVL 730

Query: 913  NSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKL 972
            N++S QH++LLTGTPLQNN+ E+++LLNFL P  F  L  F E+F D+    ++++L  +
Sbjct: 731  NNYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFSKLEIFLEEFADIAKEDQIKKLHDM 790

Query: 973  VAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSM 1032
            + PHMLRRLK D  +++P KTE +V VELSS+Q +YY+ +LTKN++ L   G G  Q S+
Sbjct: 791  LGPHMLRRLKADVFKHMPSKTELIVRVELSSMQKKYYKFILTKNFEALNTKGGG-NQVSL 849

Query: 1033 LNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHR 1089
            LN+VM L+K CNHPYL P      P   +  +      KAS KL LL  M++ L + GHR
Sbjct: 850  LNVVMDLKKCCNHPYLFPTAAIEAPKMPNGMYDGSALTKASGKLLLLQKMMRRLKEGGHR 909

Query: 1090 VLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLST 1148
            VLIFSQMTK+LD+LED+L  E G K YER+DG ++ G RQ AI RFN   + +F FLLST
Sbjct: 910  VLIFSQMTKMLDLLEDFLENE-GYK-YERIDGGITGGMRQEAIDRFNAPGAQQFAFLLST 967

Query: 1149 RSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQ 1208
            R+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ++++++YR V +ASVEERI Q
Sbjct: 968  RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTKASVEERITQ 1027

Query: 1209 LAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIE 1261
            +AKKK+ML  L V     +K+G  S++E++DIL++GTE LF        KD GEN     
Sbjct: 1028 VAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEALF--------KDEGENK---- 1075

Query: 1262 EAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDL 1321
                                      E S+ I +D+ AI RLLDR+     +TD  E   
Sbjct: 1076 -------------------------EEDSSIIHYDDKAIDRLLDRNQ---DATDDTELQS 1107

Query: 1322 ENDMLGSVKATEW 1334
             N+ L S K  ++
Sbjct: 1108 MNEYLSSFKVAQY 1120



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%)

Query: 53  RRLKNEINADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNG 112
           R   +E + D     +  +D +   C +C  GG LLCCDSCP +YH+ CL+PPL  IPNG
Sbjct: 310 REEGSEGDEDNGDVGEMEDDHHMEFCRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIPNG 369

Query: 113 KWQCPKCT 120
           +W CP+CT
Sbjct: 370 EWICPRCT 377



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 4/59 (6%)

Query: 71  NDGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
            DGY  +    C +C  GG ++ CD+CPR YH+ CLDP +++ P G W CP C ++  Q
Sbjct: 248 GDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCEKEGIQ 306


>gi|195496103|ref|XP_002095551.1| GE22457 [Drosophila yakuba]
 gi|194181652|gb|EDW95263.1| GE22457 [Drosophila yakuba]
          Length = 1982

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 301/713 (42%), Positives = 424/713 (59%), Gaps = 84/713 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKY----------------------- 649
            E+ +KW   S  H  W+PE QL V     + +++ KY                       
Sbjct: 522  EYFIKWHNMSYWHCEWVPEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRFKRIQ 581

Query: 650  ---------GTTVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDE 691
                           + +ER         W   QRVI+ R+++DG+    VKW  LPYD+
Sbjct: 582  RHKDKVGMKANDDAEVLEERFYKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDK 641

Query: 692  CTWEKLDE------PALEKYSHLTDLFVQFERQTLKKDASEDELPRGK-GDCQQSEIVAL 744
             TWE+  +       A++ Y  L  +      Q+  K + +    + K  D +   +   
Sbjct: 642  STWEEEGDDIQGLRQAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHY 701

Query: 745  TEQPE-----------------ELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
            T  PE                 E  G  L P+Q+E +NWLR  W +  + ILADEMGLGK
Sbjct: 702  TPPPEKPTTDLKKKYEDQPGFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGK 761

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            T+    F+ SLY E   + P LV VPLST+ NW  EF LWAP+   + Y G   +RA+IR
Sbjct: 762  TIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIR 821

Query: 848  Q----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLK 902
            +    +E  A     +++ +T+ YKFNVLLT+YE+I  D++ L  + W VLVVDE HRLK
Sbjct: 822  ENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLK 881

Query: 903  NSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTT 962
            ++ SK F +LNS++  +++LLTGTPLQNN+ E+++LLNFL    F  L +F+ +F D++ 
Sbjct: 882  SNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK 941

Query: 963  TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN 1022
             ++V+ L +++ PHMLRRLK D ++N+P K+E +V VELS++Q ++Y+ +LTKNY+ L N
Sbjct: 942  EEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEAL-N 1000

Query: 1023 IGKGVAQQSMLNIVMQLRKVCNHPYLIP-GTEPDSGSVEFLHEMR--IKASAKLTLLHSM 1079
               G    S++NI+M L+K CNHPYL P   E  + S   L+E+    KA+ KL LL  M
Sbjct: 1001 SKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTSAGGLYEINSLTKAAGKLVLLSKM 1060

Query: 1080 LKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDK 1139
            LK L  + HRVLIFSQMTK+LDILED+L  E     YER+DG ++   RQ AI RFN   
Sbjct: 1061 LKQLKSQNHRVLIFSQMTKMLDILEDFLEGE--QYKYERIDGGITGTLRQEAIDRFNAPG 1118

Query: 1140 S-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVV 1198
            + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V 
Sbjct: 1119 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1178

Query: 1199 RASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGTEELFND 1244
            R SVEER+ Q+AK+K+ML  L V         + +++E++DILR+GTE+LF +
Sbjct: 1179 RNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKE 1231



 Score = 76.6 bits (187), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSCP  YH  CL+PPL  IP+G W+CP+C+
Sbjct: 440 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 482



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 69  KGNDGYYYE---CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +G DG +     C +C  GG ++ CD+CPR YHL CL+P L   P GKW CP C
Sbjct: 368 EGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 421


>gi|195128581|ref|XP_002008741.1| GI13663 [Drosophila mojavensis]
 gi|193920350|gb|EDW19217.1| GI13663 [Drosophila mojavensis]
          Length = 1992

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 322/805 (40%), Positives = 450/805 (55%), Gaps = 131/805 (16%)

Query: 589  SVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK 648
            +V +R    A T     +G  V  E+ +KW   S  H  W+ E QL V     + +++ K
Sbjct: 486  AVQRRGSSEASTSKNAKQGSRVR-EYFIKWHNMSYWHCDWVSEVQLDVHHPLMIRSFQRK 544

Query: 649  YGTT-------VINICDERWKQ------------------------------------PQ 665
            Y           ++  D R+K+                                     Q
Sbjct: 545  YDMEEPPKFEESLDEADTRFKRIQRHKDKVGMKGNDDDDEAALEERFYKNGVKPEWLIVQ 604

Query: 666  RVISLRSSKDGTREAFVKWTGLPYDECTWEKL--DEPAL-EKYSHLTDL--FVQFERQTL 720
            RVI+ R+++DG+    VKW  LPYD+ TWE+   D P L +   +  DL      E+   
Sbjct: 605  RVINHRTARDGSTMYLVKWRELPYDKSTWEEEGDDIPGLRQAIDYYQDLRAVCTSEQSRG 664

Query: 721  KKDASEDELPRGKG----DCQQSEIVALTEQPE-----------------ELKGGALFPH 759
                   +  + K     D +   +   T  PE                 E  G  L P+
Sbjct: 665  SSSKKSKKGRKTKHKLELDDEDRPVKHYTPPPEKPTTDLKKKYEGQPAFLEDTGMQLHPY 724

Query: 760  QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPN 819
            Q+E +NWLR  W +  + ILADEMGLGKT+    F+ SLY E   + P LV VPLST+ N
Sbjct: 725  QIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVN 784

Query: 820  WLAEFALWAPNLNVVEYHGCAKARAIIRQ----YEWHASDPDNLNK-KTSSYKFNVLLTT 874
            W  EF LWAP+   + Y G   +RA+IR+    +E  A     +++ +T+ YKFNVLLT+
Sbjct: 785  WEREFELWAPDFYCITYIGDKDSRAVIRENELTFEEGAIRGTKVSRLRTTQYKFNVLLTS 844

Query: 875  YEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGE 934
            YE+I  D+  L  + W VLVVDE HRLK++ SK F +LNS+S  +++LLTGTPLQNN+ E
Sbjct: 845  YELISMDAPCLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYSIAYKLLLTGTPLQNNLEE 904

Query: 935  MYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTE 994
            +++LLNFL    F  L +F+ +F D++  ++V+ L +++ PHMLRRLK D ++N+P K+E
Sbjct: 905  LFHLLNFLSREKFNDLQAFQGEFADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSE 964

Query: 995  RMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP-GTE 1053
             +V VELS++Q ++Y+ +LTKNY+ L N   G    S++NI+M L+K CNHPYL P G+E
Sbjct: 965  FIVRVELSAMQKKFYKFILTKNYEAL-NSKSGGGSCSLINIMMDLKKCCNHPYLFPSGSE 1023

Query: 1054 PDSGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEF 1111
                S   ++E+    KA+ KL LL  MLK L  +GHRVLIFSQMTK+LDILED+L  E 
Sbjct: 1024 DAPTSAGGIYEINSLTKAAGKLVLLSKMLKQLKAQGHRVLIFSQMTKMLDILEDFLEGE- 1082

Query: 1112 GPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDF 1170
                YER+DGS++   RQ AI RFN   ++ FVFLLSTR+ GLGINLATADTVIIYDSD+
Sbjct: 1083 -QYKYERIDGSITGTVRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDW 1141

Query: 1171 NPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NK 1223
            NPH DIQA +RAHRIGQ+ ++++YR V R SVEER+ Q+AK+K+ML  L V         
Sbjct: 1142 NPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGA 1201

Query: 1224 SGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQ 1283
            + +++E++DILR+GTE+LF +                EEA+                   
Sbjct: 1202 NFTKQELDDILRFGTEDLFKED-------------DKEEAIH------------------ 1230

Query: 1284 DKCTEGSTKIVWDENAIARLLDRSN 1308
                       +D+ A+A LLDRSN
Sbjct: 1231 -----------YDDKAVAELLDRSN 1244



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSCP  YH  CL+PPL  IP+G W+CP+C+
Sbjct: 427 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 469



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 69  KGNDGYYYE---CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +G DG +     C +C  GG ++ CD+CPR YHL CL+P L   P GKW CP C
Sbjct: 355 EGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 408


>gi|194751939|ref|XP_001958281.1| GF10842 [Drosophila ananassae]
 gi|190625563|gb|EDV41087.1| GF10842 [Drosophila ananassae]
          Length = 1971

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 303/713 (42%), Positives = 425/713 (59%), Gaps = 84/713 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTT-------VINICDERWKQ-- 663
            E+ +KW   S  H  W+ E QL V     + +++ KY           ++  D R+K+  
Sbjct: 507  EYFIKWHNMSYWHCEWVSEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQ 566

Query: 664  --------------------------------PQRVISLRSSKDGTREAFVKWTGLPYDE 691
                                             QRVI+ R+++DG+    VKW  LPYD+
Sbjct: 567  RHKDKVGMKADDDADDLEERFYKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDK 626

Query: 692  CTWEKL--DEPAL-EKYSHLTDL---------------FVQFERQTLKKDASEDELPRGK 733
             TWE+   D P L +   +  DL                 +  R  LK +  ED   +  
Sbjct: 627  STWEEEGDDIPGLRQAIDYYQDLRAVCTSENTRSSSKKSKKGRRSKLKAEDDEDRPVKHY 686

Query: 734  GDCQQSEIVALTE----QPEELKGGA--LFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
                +     L +    QP  L+G    L P+Q+E +NWLR  W +  + ILADEMGLGK
Sbjct: 687  TPPPEKPTTDLKKKYEGQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGK 746

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            T+    F+ SLY E   + P LV VPLST+ NW  EF LWAP+   + Y G   +RA+IR
Sbjct: 747  TIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIR 806

Query: 848  Q----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLK 902
            +    +E  A     +++ +T+ YKFNVLLT+YE+I  D++ L  + W VLVVDE HRLK
Sbjct: 807  ENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLK 866

Query: 903  NSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTT 962
            ++ SK F +LNS++  +++LLTGTPLQNN+ E+++LLNFL    F  L +F+ +F D++ 
Sbjct: 867  SNQSKFFRILNSYAIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK 926

Query: 963  TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN 1022
             ++V+ L +++ PHMLRRLK D ++N+P K+E +V VELS++Q ++Y+ +LTKNY+ L N
Sbjct: 927  EEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEAL-N 985

Query: 1023 IGKGVAQQSMLNIVMQLRKVCNHPYLIP-GTEPDSGSVEFLHEMR--IKASAKLTLLHSM 1079
               G    S++NI+M L+K CNHPYL P   E    S   L+E+    KA+ KL LL  M
Sbjct: 986  SKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEAPTSAGGLYEINSLTKAAGKLVLLSKM 1045

Query: 1080 LKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDK 1139
            LK L  + HRVLIFSQMTK+LDILED+L  E     YER+DG ++   RQ AI RFN   
Sbjct: 1046 LKQLKSQNHRVLIFSQMTKMLDILEDFLEGE--QYKYERIDGGITGTVRQEAIDRFNAPG 1103

Query: 1140 S-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVV 1198
            + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V 
Sbjct: 1104 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1163

Query: 1199 RASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGTEELFND 1244
            R SVEER+ Q+AK+K+ML  L V         + +++E++DILR+GTE+LF +
Sbjct: 1164 RNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKE 1216



 Score = 77.0 bits (188), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSCP  YH  CL+PPL  IP+G W+CP+C+
Sbjct: 425 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 467



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 69  KGNDGYYYE---CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +G DG +     C +C  GG ++ CD+CPR YHL CL+P L   P GKW CP C
Sbjct: 353 EGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 406


>gi|443719422|gb|ELU09603.1| hypothetical protein CAPTEDRAFT_166178 [Capitella teleta]
          Length = 1711

 Score =  528 bits (1359), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 344/843 (40%), Positives = 473/843 (56%), Gaps = 98/843 (11%)

Query: 603  AQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------------- 648
            AQ++ +    EF VKW   S  H  WI E QL V       NY+ K              
Sbjct: 303  AQIEREHKEREFFVKWHELSYWHCEWISELQLDVYHPAMFRNYQRKNDMDEPPPLEDGSS 362

Query: 649  YGTTV-----INICDE--------RWKQPQRVISL-RSSKDGTREAFVKWTGLPYDECTW 694
            YG         N+ ++         W Q  R+++  +++KDGT    VKW  LPYD  TW
Sbjct: 363  YGKDTKEEDPHNLEEKFYRYGVRPEWLQVHRILNHSKNAKDGTVWYLVKWRELPYDCATW 422

Query: 695  EKLD------EPALEKYSHLTDLFV----------QFERQTLKKDASEDELPRGKGDCQQ 738
            E  D      +  +++Y  L    +          +  +++ KK   +D     + D  Q
Sbjct: 423  EGSDAEIPDLQSEVDRYHDLRWCMLGEEEKKKSKKRSTKKSKKKKRRDDTEDEDEEDDTQ 482

Query: 739  SEIVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFIS 796
             E   L  QP+     GG L  +QLE LNWLR  W++  + ILADEMGLGKT+   AF+ 
Sbjct: 483  DEDEKLEVQPKYFDEVGGKLHDYQLEGLNWLRHSWNQHTDTILADEMGLGKTIQTIAFLR 542

Query: 797  SLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEW----- 851
            SLY E     P LV  PLST+ NW  EF  WAP+L VV Y G   +RA+IR++E+     
Sbjct: 543  SLYREGHTAGPFLVSAPLSTIINWEREFEFWAPDLYVVTYVGDKDSRAVIREHEFSFEEG 602

Query: 852  --HASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLF 909
                 +     +K S  KF VLLT+YE+I  D + L  V W VLVVDE HRLKN+ SK F
Sbjct: 603  AIRGGNKAFKMRKDSGVKFQVLLTSYELICIDQATLGSVDWSVLVVDEAHRLKNNQSKFF 662

Query: 910  SLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEEL 969
             +L S++  +++LLTGTPLQNN+ E+++LLNFL    F  +++F E+F D++   ++++L
Sbjct: 663  RILQSYNIGYKLLLTGTPLQNNLEELFHLLNFLDSKQFGHMTTFLEEFADISKEDQIKKL 722

Query: 970  KKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQ 1029
             +++ PH+LRRLK D ++N+P K+E +V VEL+ +Q +YY+ +LT+N++ L N   G  Q
Sbjct: 723  HEVLGPHLLRRLKADVLKNMPSKSEFIVRVELNPMQRKYYKYILTRNFEAL-NSRTGSNQ 781

Query: 1030 QSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKE 1086
             S+LNI+M L+K CNHPYL P      P   +  F     IKA  KL L+ +ML+ L  +
Sbjct: 782  VSLLNIMMDLKKCCNHPYLFPTAANEAPKLPNGMFEGRGLIKACGKLELMAAMLRKLSND 841

Query: 1087 GHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFL 1145
            GHRVLIFSQMTK+LDILED+L  E G K YER+DG V+   RQ AI RFN   S  F FL
Sbjct: 842  GHRVLIFSQMTKMLDILEDFLENE-GYK-YERIDGGVTGSLRQDAIDRFNAPGSPAFAFL 899

Query: 1146 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEER 1205
            LSTR+ GLGINLATADTV+IYDSD+NPH DIQA +RAHRIGQ+ R+L+YR V R SVEER
Sbjct: 900  LSTRAGGLGINLATADTVVIYDSDWNPHNDIQAFSRAHRIGQANRVLIYRFVTRNSVEER 959

Query: 1206 ILQLAKKKLMLDQLFVN--------KSGSQKEVEDILRWGTEELF-NDSPGINGKDMGEN 1256
            I Q+AK+K+ML  L V          S S++E++DIL++GTEELF + +     K  G  
Sbjct: 960  ITQVAKRKMMLTHLVVRPGMGGSKSSSMSKQELDDILKFGTEELFKDAAADEAAKAEGGK 1019

Query: 1257 NTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDL 1316
               + E    L  K+ K                  +I+WDE+AI +LLDRS       ++
Sbjct: 1020 PLKVSEEAEALFAKNEK--------------SQEARILWDEDAIGKLLDRSQEGQEEKEM 1065

Query: 1317 AEGDLENDMLGSVKATEWNEETTEDQAESPVAAVDDASAENSERKEENAVTGIEENEWDR 1376
            A     N+ L S K   +  +  E++ E     V    AE++           +   W++
Sbjct: 1066 A----LNEYLSSFKVATYTVQEGEEEEEEAEMEVLKQEAEHA-----------DPAYWEK 1110

Query: 1377 LLR 1379
            LLR
Sbjct: 1111 LLR 1113



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 6/65 (9%)

Query: 63  RSSTKKKGNDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQC 116
           R  +KK   DG   E      C +C  GG ++ CD+CPR YHL CL+P L++ P GKW C
Sbjct: 135 RKRSKKPTGDGEGEETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELEQAPEGKWSC 194

Query: 117 PKCTQ 121
           P C +
Sbjct: 195 PHCVR 199



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 29/43 (67%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+C   YH+ CL P +  +P+G W CP+C+
Sbjct: 223 CRVCKDGGELLCCDTCTSAYHVFCLAPNVANVPDGIWHCPRCS 265


>gi|357605668|gb|EHJ64730.1| putative Chromodomain helicase-DNA-binding protein Mi-2-like protein
            [Danaus plexippus]
          Length = 1963

 Score =  527 bits (1358), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 306/720 (42%), Positives = 416/720 (57%), Gaps = 86/720 (11%)

Query: 611  SYEFLVKWVGKSNIHNSWIPESQLKVL----------------------------AKRKL 642
            S EF VKW  +S  H SWI E QL V                              +R++
Sbjct: 507  SREFFVKWHERSYWHCSWISEIQLDVFHPLMYRYYMRKSDPEEPPKLDDGLEEREGRRRM 566

Query: 643  ENYKAKYGTTVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECT 693
            ++ K  +      + +E+         W    RVI+ R+++DGT    VKW  L YD+ T
Sbjct: 567  KHSKQHHQDNDEKLLEEKYYRYGVRPEWLIVHRVINHRTARDGTTYYLVKWRDLSYDQAT 626

Query: 694  WEKLDEP------ALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVA---- 743
            WE   E       ALE Y  +        +    K        + K +    E  +    
Sbjct: 627  WESEHEDIAGLKNALEYYQDMRAYITSEGKTKGSKGKKAGRKSKNKDNIDDDESSSGLQF 686

Query: 744  -------------------LTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADE 782
                                 +QP  +   G  L  +QL+ LNWLR  W +  + ILADE
Sbjct: 687  KGRKYNPPPDRPTTNLNKKYEDQPPFVYETGMQLHTYQLDGLNWLRYSWGQGIDTILADE 746

Query: 783  MGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKA 842
            MGLGKT+    F+ SL+ E   K P LV VPLST+ NW  EF LWAP+L  + Y G   +
Sbjct: 747  MGLGKTIQTVTFLYSLFKEGHCKGPFLVSVPLSTIINWEREFELWAPDLYCITYVGDKDS 806

Query: 843  RAIIRQYEWHASDPDNL----NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
            RA+IR+ E    D  N     +K  S  KFNVLLT+YE+I  DS+ L  + W VLVVDE 
Sbjct: 807  RAVIRENELTFDDGANRGGRPSKIKSQVKFNVLLTSYELISIDSTCLGSIDWAVLVVDEA 866

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLK++ SK F LL  +   +++LLTGTPLQNN+ E+++LLNFL    F  L++F+ +F 
Sbjct: 867  HRLKSNQSKFFRLLAGYHINYKLLLTGTPLQNNLEELFHLLNFLNKDKFNDLAAFQNEFA 926

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            D++  ++V+ L +++ PHMLRRLK D ++N+P K+E +V VELS +Q +YY+ +LT+NY+
Sbjct: 927  DVSKEEQVKRLHEMLGPHMLRRLKADVLKNMPAKSEFIVRVELSPMQKKYYKYILTRNYE 986

Query: 1019 ILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTL 1075
             L N   G    S+LN++M L+K CNHPYL P      P      +  +  +KAS KL L
Sbjct: 987  AL-NPKSGGQTVSLLNVMMDLKKCCNHPYLFPVAAEEAPLGPHGNYETQALVKASGKLVL 1045

Query: 1076 LHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRF 1135
            +  MLK L ++GHRVLIFSQMTK+LDILED+L  E G K YER+DG ++   RQ AI RF
Sbjct: 1046 MSKMLKQLKEQGHRVLIFSQMTKMLDILEDFLEGE-GYK-YERIDGGITGTIRQEAIDRF 1103

Query: 1136 NQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVY 1194
            N   + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++Y
Sbjct: 1104 NAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIY 1163

Query: 1195 RLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGTEELFNDSPG 1247
            R V R SVEER+ Q+AK+K+ML  L V         + +++E++DILR+GTEELF +  G
Sbjct: 1164 RFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEELFKEEEG 1223



 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C IC  GG LLCCDSCP  YH  CL+PPL+ +P+G+W+CP+C+
Sbjct: 437 CRICKDGGELLCCDSCPSAYHRFCLNPPLEEVPDGEWKCPRCS 479



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 31/48 (64%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           C +C  GG ++ CD+CPR YHL CLDP L+  P G+W C  C  + +Q
Sbjct: 378 CEVCQQGGEIILCDTCPRAYHLVCLDPELEETPEGRWSCTYCQAEGNQ 425


>gi|405972247|gb|EKC37026.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
            [Crassostrea gigas]
          Length = 2123

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 322/772 (41%), Positives = 433/772 (56%), Gaps = 119/772 (15%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK--------------YG-------- 650
            EF VKW   S  H SWI E QL V        Y  K              YG        
Sbjct: 479  EFFVKWHDLSYWHCSWISELQLDVYHPAMYRAYIRKNDMDEPPPLEDGSSYGGKDYKKQR 538

Query: 651  ---------------TTVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTG 686
                               +  +E+         W Q  R+I+ R  K+ T    VKW  
Sbjct: 539  KKNRRRKDEEEEKEEEDDDSNLEEKFYKYGVRPEWLQINRIINHRQGKNETW-YLVKWCD 597

Query: 687  LPYDECTWEK--LDEPALEKYSH---------LTDLFVQFERQTLKKDASEDELPRGKGD 735
            LPYD+ TWEK  LD P + K+           + D   + +     +D SE ++      
Sbjct: 598  LPYDQSTWEKENLDLPEISKHISQYEALRVLMMGDKRKKGKGGKRSRDGSEIQVKMPPSY 657

Query: 736  CQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACA 793
                      +QP  +   GG L P+QLE +NWLR  W    + ILADEMGLGKT+    
Sbjct: 658  PSTDLRKKWEKQPAYIDATGGTLHPYQLEGVNWLRYSWSNGTDTILADEMGLGKTIQTIV 717

Query: 794  FISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHA 853
            F+ SLY E  +K P LV  PLST+ NW  EF  WAP+L VV Y G    R++IR++E+  
Sbjct: 718  FLQSLYQEGHSKGPFLVSAPLSTIINWEREFEFWAPDLYVVTYIGDKDCRSVIREHEFSF 777

Query: 854  SDPDNLNKKTSS-------YKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGS 906
             +    +   +S        KF+VLLT+YE+I  DS+ L  V W VLVVDE HRLKN+ S
Sbjct: 778  EENAIRSGAKASKLKSDCQVKFHVLLTSYELISIDSACLGSVDWAVLVVDEAHRLKNNQS 837

Query: 907  KLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKV 966
            K F +L+++   +++LLTGTPLQNN+ E+++LLNFL P  F  L+ F ++F D+    +V
Sbjct: 838  KFFRILSNYKIGYKLLLTGTPLQNNLEELFHLLNFLSPDKFNDLTVFLDEFADIAKEDQV 897

Query: 967  EELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKG 1026
            ++L  ++ PH+LRRLK D ++ +P K+E +V VELS +Q +YY+ +LT+N+  L +  KG
Sbjct: 898  KKLHDMLGPHLLRRLKADVLKGMPSKSEFIVRVELSPMQKKYYKYILTRNFDALNS--KG 955

Query: 1027 VAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE---FLHEMRIKASAKLTLLHSMLKVL 1083
              Q S+LNI+M L+K CNHPYL P    D+  +    +      KA  KL LL +M+K L
Sbjct: 956  GNQVSLLNIMMDLKKCCNHPYLFPTASNDAPKLPNGMYEGTAMTKACGKLELLSNMMKKL 1015

Query: 1084 YKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRF 1142
             ++GHR+LIFSQMTK+LDILED+L  E+    YER+DG ++   RQ AI RFN  D  +F
Sbjct: 1016 KEKGHRLLIFSQMTKMLDILEDFL--EYEGYKYERIDGGITGSMRQDAIDRFNAPDAPQF 1073

Query: 1143 VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASV 1202
             FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V R SV
Sbjct: 1074 AFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSV 1133

Query: 1203 EERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGE 1255
            EERI Q+AKKK+ML  L V     NK G  S++E++DIL++GTEELF        KDM E
Sbjct: 1134 EERITQVAKKKMMLTHLVVRPGLGNKGGAMSKQELDDILKFGTEELF--------KDMSE 1185

Query: 1256 NNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRS 1307
                            RK              E   +IV+D+ A+ +LLDR+
Sbjct: 1186 ----------------RKE-------------EEEARIVYDDEALDKLLDRT 1208



 Score = 80.1 bits (196), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 39/54 (72%)

Query: 67  KKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           K++  D +   C +C  GG LLCCD+CP  YH+ CL+PP+K IP+G+W CP+C+
Sbjct: 375 KEQEEDDHMEFCRVCKDGGELLCCDTCPSAYHVHCLNPPMKMIPDGEWHCPRCS 428



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 4/52 (7%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           DGY  E    C +C  GG ++ CD+CPR YHL C DP L+  P GKW CP C
Sbjct: 318 DGYETEHQDYCEVCQQGGEIILCDTCPRAYHLVCFDPELEEPPEGKWSCPHC 369


>gi|148667386|gb|EDK99802.1| mCG144495 [Mus musculus]
          Length = 680

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 317/694 (45%), Positives = 421/694 (60%), Gaps = 75/694 (10%)

Query: 674  KDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQF---ERQTLKKDASEDELP 730
            K G     +KW  LPYD+ +WE  D   ++ Y    DLF Q     R+ ++ +       
Sbjct: 21   KKGHVHYLIKWRDLPYDQASWESED-VEIQDY----DLFKQSYWNHRELMRGEEGRPGKK 75

Query: 731  RGKGDCQQSE----------IVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVI 778
              K   ++ E           V    QPE L   GG L P+Q+E LNWLR  W +  + I
Sbjct: 76   LKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTI 135

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKTV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP++ VV Y G
Sbjct: 136  LADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVG 195

Query: 839  CAKARAIIRQYEWHASD-------PDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWE 891
               +RAIIR+ E+   D         +  KK +S KF+VLLT+YE+I  D + L  + W 
Sbjct: 196  DKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWA 255

Query: 892  VLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLS 951
             L+VDE HRLKN+ SK F +LN +S QH++LLTGTPLQNN+ E+++LLNFL P  F +L 
Sbjct: 256  CLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLE 315

Query: 952  SFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRA 1011
             F E+F D+    ++++L  ++ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ 
Sbjct: 316  GFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKY 375

Query: 1012 MLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIK 1068
            +LT+N++ L   G G  Q S+LN+VM L+K CNHPYL P      P   +  +     I+
Sbjct: 376  ILTRNFEALNARGGG-NQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIR 434

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            AS KL LL  MLK L + GHRVLIFSQMTK+LD+LED+L  E G K YER+DG ++   R
Sbjct: 435  ASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHE-GYK-YERIDGGITGNMR 492

Query: 1129 QAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            Q AI RFN   + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ
Sbjct: 493  QEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ 552

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEE 1240
            +K++++YR V RASVEERI Q+AKKK+ML  L V     +K+G  S++E++DIL++GTEE
Sbjct: 553  NKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEE 612

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAI 1300
            LF D     G D                               +K  E S+ I +D+ AI
Sbjct: 613  LFKDEATDGGGD-------------------------------NKEGEDSSVIHYDDKAI 641

Query: 1301 ARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEW 1334
             RLLDR+  ++  T+L      N+ L S K  ++
Sbjct: 642  ERLLDRNQDETEDTELQG---MNEYLSSFKVAQY 672


>gi|345481883|ref|XP_001605650.2| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
            [Nasonia vitripennis]
          Length = 2009

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 316/733 (43%), Positives = 422/733 (57%), Gaps = 83/733 (11%)

Query: 595  QEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGT--- 651
            +EP+ ++++         EF VKWV +S  +  W+ E QL V       NY  KY     
Sbjct: 496  EEPSTSKASSSGKPRKIREFFVKWVDRSYWYCDWVTELQLDVFHPLMFRNYSRKYDMDEP 555

Query: 652  ----TVINICDER--------------------------------WKQPQRVISLRSSKD 675
                  ++  D R                                W    RVI+ R  +D
Sbjct: 556  PKLEEPLDESDGRVKRLRDVDKDNLALRDEYNLEERFYRFGVRPDWLVVHRVINHRLQRD 615

Query: 676  GTREAFVKWTGLPYDECTWE--KLDEP----ALEKY-------------SHLTDLFVQFE 716
            G     VKW  L YD+ TWE    D P    A+E Y             S         +
Sbjct: 616  GRALYLVKWRELGYDQATWEDENADIPGLKTAIEYYLDLRAANCADGPPSRKGKKGKGKK 675

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTE----QPEEL--KGGALFPHQLEALNWLRKC 770
             +T +    E+  PR            L +    QPE L   G  L  +QLE LNWLR  
Sbjct: 676  SKTKEIIDDEERTPRRYTPPPDKPTTDLKKKYERQPEYLDCTGMQLHHYQLEGLNWLRYS 735

Query: 771  WHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPN 830
            W +  + ILADEMGLGKT+    F+ SLY E   K P LV VPLST+ NW  EF  WAP+
Sbjct: 736  WGQGIDTILADEMGLGKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPD 795

Query: 831  LNVVEYHGCAKARAIIRQ----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILADSSHL 885
               V Y G   +R +IR+    +E  A      +K ++S  KFNVLLT+YE+I  DS+ L
Sbjct: 796  FYCVTYVGDKDSRMVIRENELSFEEGAVRGGRASKIRSSQIKFNVLLTSYELISIDSACL 855

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
              + W VLVVDE HRLK++ SK F LL S++  +++LLTGTPLQNN+ E+++LLNFL   
Sbjct: 856  GSIDWAVLVVDEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNFLCRD 915

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
             F  LS+F+ +F D++   +V++L +++ PHMLRRLK D ++N+P K+E +V VELS +Q
Sbjct: 916  KFNDLSAFQNEFADISKEDQVKKLHEMLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQ 975

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE---PDSGSVEFL 1062
             +YY+ +LT+N++ L   G G  Q S+LNI+M L+K CNHPYL P      P   +  + 
Sbjct: 976  KKYYKYILTRNFEALNPKGGG-QQVSLLNIMMDLKKCCNHPYLFPAASQEAPTGPNGNYE 1034

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
                IKA+ KL LL  MLK L  +GHRVLIFSQMTK+LD+LEDYL  E G K YER+DG+
Sbjct: 1035 TSALIKAAGKLVLLSRMLKKLRDDGHRVLIFSQMTKMLDLLEDYLEGE-GYK-YERIDGN 1092

Query: 1123 VSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            ++   RQ AI RFN   + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +R
Sbjct: 1093 ITGTQRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSR 1152

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDIL 1234
            AHRIGQ+ ++++YR V R SVEER+ Q+AK+K+ML  L V         + S++E++DIL
Sbjct: 1153 AHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFSKQELDDIL 1212

Query: 1235 RWGTEELFNDSPG 1247
            R+GTEELF +  G
Sbjct: 1213 RFGTEELFKEEEG 1225



 Score = 74.7 bits (182), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 31/43 (72%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSC   YH  CL+PPL  IP+G W+CP+C+
Sbjct: 429 CRVCKDGGELLCCDSCTSAYHTHCLNPPLTEIPDGDWKCPRCS 471



 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CPR YHL CL+P L+  P GKW CP C
Sbjct: 372 CEVCQQGGEIILCDTCPRAYHLVCLEPELEETPEGKWSCPHC 413


>gi|24667055|ref|NP_649154.2| Mi-2, isoform A [Drosophila melanogaster]
 gi|281366478|ref|NP_001163476.1| Mi-2, isoform C [Drosophila melanogaster]
 gi|13124018|sp|O97159.2|CHDM_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein Mi-2 homolog;
            AltName: Full=ATP-dependent helicase Mi-2; Short=dMi-2
 gi|23093096|gb|AAF49099.2| Mi-2, isoform A [Drosophila melanogaster]
 gi|272455249|gb|ACZ94747.1| Mi-2, isoform C [Drosophila melanogaster]
          Length = 1982

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 301/713 (42%), Positives = 426/713 (59%), Gaps = 84/713 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKV-----------------------------LAKRKLE 643
            E+ +KW   S  H  W+PE QL V                                ++++
Sbjct: 522  EYFIKWHNMSYWHCEWVPEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQ 581

Query: 644  NYKAKYGTTV---INICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDE 691
             +K K G        + +ER         W   QRVI+ R+++DG+    VKW  LPYD+
Sbjct: 582  RHKDKVGMKANDDAEVLEERFYKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDK 641

Query: 692  CTWEKLDE------PALEKYSHLTDLFVQFERQTLKK------------DASEDELPRGK 733
             TWE+  +       A++ Y  L  +      Q+  K            +  ED   +  
Sbjct: 642  STWEEEGDDIQGLRQAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHY 701

Query: 734  GDCQQSEIVALT----EQPEELKGGA--LFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
                +     L     +QP  L+G    L P+Q+E +NWLR  W +  + ILADEMGLGK
Sbjct: 702  TPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGK 761

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            T+    F+ SLY E   + P LV VPLST+ NW  EF LWAP+   + Y G   +RA+IR
Sbjct: 762  TIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIR 821

Query: 848  Q----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLK 902
            +    +E  A     +++ +T+ YKFNVLLT+YE+I  D++ L  + W VLVVDE HRLK
Sbjct: 822  ENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLK 881

Query: 903  NSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTT 962
            ++ SK F +LNS++  +++LLTGTPLQNN+ E+++LLNFL    F  L +F+ +F D++ 
Sbjct: 882  SNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK 941

Query: 963  TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN 1022
             ++V+ L +++ PHMLRRLK D ++N+P K+E +V VELS++Q ++Y+ +LTKNY+ L N
Sbjct: 942  EEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEAL-N 1000

Query: 1023 IGKGVAQQSMLNIVMQLRKVCNHPYLIPG-TEPDSGSVEFLHEMR--IKASAKLTLLHSM 1079
               G    S++NI+M L+K CNHPYL P   E  + +   L+E+    KA+ KL LL  M
Sbjct: 1001 SKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKM 1060

Query: 1080 LKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDK 1139
            LK L  + HRVLIFSQMTK+LDILED+L  E     YER+DG ++   RQ AI RFN   
Sbjct: 1061 LKQLKAQNHRVLIFSQMTKMLDILEDFLEGE--QYKYERIDGGITGTLRQEAIDRFNAPG 1118

Query: 1140 S-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVV 1198
            + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V 
Sbjct: 1119 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1178

Query: 1199 RASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGTEELFND 1244
            R SVEER+ Q+AK+K+ML  L V         + +++E++DILR+GTE+LF +
Sbjct: 1179 RNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKE 1231



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSCP  YH  CL+PPL  IP+G W+CP+C+
Sbjct: 440 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 482



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 69  KGNDGYYYE---CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +G DG +     C +C  GG ++ CD+CPR YHL CL+P L   P GKW CP C
Sbjct: 368 EGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 421


>gi|4325130|gb|AAD17276.1| dMi-2 protein [Drosophila melanogaster]
          Length = 1982

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 301/713 (42%), Positives = 426/713 (59%), Gaps = 84/713 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKV-----------------------------LAKRKLE 643
            E+ +KW   S  H  W+PE QL V                                ++++
Sbjct: 522  EYFIKWHNMSYWHCEWVPEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQ 581

Query: 644  NYKAKYGTTV---INICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDE 691
             +K K G        + +ER         W   QRVI+ R+++DG+    VKW  LPYD+
Sbjct: 582  RHKDKVGMKANDDAEVLEERFYKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDK 641

Query: 692  CTWEKLDE------PALEKYSHLTDLFVQFERQTLKK------------DASEDELPRGK 733
             TWE+  +       A++ Y  L  +      Q+  K            +  ED   +  
Sbjct: 642  STWEEEGDDIQGLRQAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHY 701

Query: 734  GDCQQSEIVALT----EQPEELKGGA--LFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
                +     L     +QP  L+G    L P+Q+E +NWLR  W +  + ILADEMGLGK
Sbjct: 702  TPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGK 761

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            T+    F+ SLY E   + P LV VPLST+ NW  EF LWAP+   + Y G   +RA+IR
Sbjct: 762  TIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIR 821

Query: 848  Q----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLK 902
            +    +E  A     +++ +T+ YKFNVLLT+YE+I  D++ L  + W VLVVDE HRLK
Sbjct: 822  ENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLK 881

Query: 903  NSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTT 962
            ++ SK F +LNS++  +++LLTGTPLQNN+ E+++LLNFL    F  L +F+ +F D++ 
Sbjct: 882  SNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK 941

Query: 963  TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN 1022
             ++V+ L +++ PHMLRRLK D ++N+P K+E +V VELS++Q ++Y+ +LTKNY+ L N
Sbjct: 942  EEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEAL-N 1000

Query: 1023 IGKGVAQQSMLNIVMQLRKVCNHPYLIPG-TEPDSGSVEFLHEMR--IKASAKLTLLHSM 1079
               G    S++NI+M L+K CNHPYL P   E  + +   L+E+    KA+ KL LL  M
Sbjct: 1001 SKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKM 1060

Query: 1080 LKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDK 1139
            LK L  + HRVLIFSQMTK+LDILED+L  E     YER+DG ++   RQ AI RFN   
Sbjct: 1061 LKQLKAQNHRVLIFSQMTKMLDILEDFLEGE--QYKYERIDGGITGTLRQEAIDRFNAPG 1118

Query: 1140 S-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVV 1198
            + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V 
Sbjct: 1119 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1178

Query: 1199 RASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGTEELFND 1244
            R SVEER+ Q+AK+K+ML  L V         + +++E++DILR+GTE+LF +
Sbjct: 1179 RNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKE 1231



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSCP  YH  CL+PPL  IP+G W+CP+C+
Sbjct: 440 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 482



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 69  KGNDGYYYE---CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +G DG +     C +C  GG ++ CD+CPR YHL CL+P L   P GKW CP C
Sbjct: 368 EGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 421


>gi|62472261|ref|NP_001014591.1| Mi-2, isoform B [Drosophila melanogaster]
 gi|61678453|gb|AAX52739.1| Mi-2, isoform B [Drosophila melanogaster]
          Length = 1983

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 301/713 (42%), Positives = 426/713 (59%), Gaps = 84/713 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKV-----------------------------LAKRKLE 643
            E+ +KW   S  H  W+PE QL V                                ++++
Sbjct: 523  EYFIKWHNMSYWHCEWVPEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQ 582

Query: 644  NYKAKYGTTV---INICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDE 691
             +K K G        + +ER         W   QRVI+ R+++DG+    VKW  LPYD+
Sbjct: 583  RHKDKVGMKANDDAEVLEERFYKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDK 642

Query: 692  CTWEKLDE------PALEKYSHLTDLFVQFERQTLKK------------DASEDELPRGK 733
             TWE+  +       A++ Y  L  +      Q+  K            +  ED   +  
Sbjct: 643  STWEEEGDDIQGLRQAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHY 702

Query: 734  GDCQQSEIVALT----EQPEELKGGA--LFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
                +     L     +QP  L+G    L P+Q+E +NWLR  W +  + ILADEMGLGK
Sbjct: 703  TPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGK 762

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            T+    F+ SLY E   + P LV VPLST+ NW  EF LWAP+   + Y G   +RA+IR
Sbjct: 763  TIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIR 822

Query: 848  Q----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLK 902
            +    +E  A     +++ +T+ YKFNVLLT+YE+I  D++ L  + W VLVVDE HRLK
Sbjct: 823  ENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLK 882

Query: 903  NSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTT 962
            ++ SK F +LNS++  +++LLTGTPLQNN+ E+++LLNFL    F  L +F+ +F D++ 
Sbjct: 883  SNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK 942

Query: 963  TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN 1022
             ++V+ L +++ PHMLRRLK D ++N+P K+E +V VELS++Q ++Y+ +LTKNY+ L N
Sbjct: 943  EEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEAL-N 1001

Query: 1023 IGKGVAQQSMLNIVMQLRKVCNHPYLIPG-TEPDSGSVEFLHEMR--IKASAKLTLLHSM 1079
               G    S++NI+M L+K CNHPYL P   E  + +   L+E+    KA+ KL LL  M
Sbjct: 1002 SKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKM 1061

Query: 1080 LKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDK 1139
            LK L  + HRVLIFSQMTK+LDILED+L  E     YER+DG ++   RQ AI RFN   
Sbjct: 1062 LKQLKAQNHRVLIFSQMTKMLDILEDFLEGE--QYKYERIDGGITGTLRQEAIDRFNAPG 1119

Query: 1140 S-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVV 1198
            + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V 
Sbjct: 1120 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1179

Query: 1199 RASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGTEELFND 1244
            R SVEER+ Q+AK+K+ML  L V         + +++E++DILR+GTE+LF +
Sbjct: 1180 RNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKE 1232



 Score = 76.6 bits (187), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSCP  YH  CL+PPL  IP+G W+CP+C+
Sbjct: 441 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 483



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 69  KGNDGYYYE---CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +G DG +     C +C  GG ++ CD+CPR YHL CL+P L   P GKW CP C
Sbjct: 369 EGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 422


>gi|321479460|gb|EFX90416.1| hypothetical protein DAPPUDRAFT_232072 [Daphnia pulex]
          Length = 2083

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 300/667 (44%), Positives = 412/667 (61%), Gaps = 53/667 (7%)

Query: 642  LENYKAKYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK----L 697
            L+N   +YG          W    RVI+ R+ +D      VKW  L YD  +WE+    +
Sbjct: 685  LDNRFYRYGIR------PEWLVVHRVINHRTLRDNRTLYLVKWRELNYDMASWEEEGTEV 738

Query: 698  DEPALEK-YSHLTDLFVQFERQTLKKDAS-----------------EDELPRGKGDCQQS 739
            + P L++      DL V     T  K  S                 E E PR      + 
Sbjct: 739  EIPGLKRGIEEYFDLRVACGVDTPAKKKSKGKSHKKGKSKEVAAEEERETPRRYNPPPEK 798

Query: 740  EIVALTE----QPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACA 793
             I  L+     QPE +   G AL P+Q+E LNWLR  W +  + ILADEMGLGKT+    
Sbjct: 799  PISNLSRKWERQPEYIDASGMALHPYQMEGLNWLRYSWGQGTDTILADEMGLGKTIQTIT 858

Query: 794  FISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYE--W 851
            F+ SLY E   + P LV VPLST+ NW  EF  WAP+  VV Y G   +R +IR++E  +
Sbjct: 859  FLYSLYKEGHCRGPFLVAVPLSTIINWEREFETWAPDFYVVTYVGDKDSRVVIREHELSF 918

Query: 852  HASDPDNLNK----KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSK 907
                    NK    +T+S KF+VLLT+YE++  D++ L  + W VLVVDE HRLKN+ SK
Sbjct: 919  EEGAVRGGNKACKIRTNSVKFHVLLTSYELVSIDAALLNSIEWAVLVVDEAHRLKNNQSK 978

Query: 908  LFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVE 967
             F +LNS++ ++++LLTGTPLQNN+ E+++LLNFL P  F  L +F  +F DL   ++V+
Sbjct: 979  FFRILNSYNLRYKLLLTGTPLQNNLEELFHLLNFLCPDKFNDLLAFTNEFADLAKEEQVK 1038

Query: 968  ELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGV 1027
             L  ++ PHMLRRLK D ++N+P K+E +V VELS +Q +YY+ +LT+N++ L N   G 
Sbjct: 1039 RLHDMLGPHMLRRLKADVLKNMPTKSEFIVRVELSPMQKKYYKYVLTRNFEAL-NSRTGG 1097

Query: 1028 AQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE---FLHEMRIKASAKLTLLHSMLKVLY 1084
             Q S+LNI+M L+K CNHPYL P    ++  ++   +     +KAS KL LL  ML+VL 
Sbjct: 1098 QQVSLLNIMMDLKKCCNHPYLFPVASQEAPCLQNGMYETTALVKASGKLVLLSKMLRVLK 1157

Query: 1085 KEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFV 1143
            ++GHRVLIFSQMTK+LDILED+L  E     YER+DG ++   RQ AI RFN   + +FV
Sbjct: 1158 EQGHRVLIFSQMTKMLDILEDFLEGE--QYKYERIDGGITGTLRQDAIDRFNAPGAPQFV 1215

Query: 1144 FLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVE 1203
            FLLSTR+ GLGINLATADTV+IYDSD+NPH DIQA +RAHRIGQ+ ++++YR V R SVE
Sbjct: 1216 FLLSTRAGGLGINLATADTVVIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVE 1275

Query: 1204 ERILQLAKKKLMLDQLFVNK------SGSQKEVEDILRWGTEELFNDSPGINGKDMGENN 1257
            ER+ Q+AKKK+ML  L V        + S++E++DILR+GTEELF +  G   + +  ++
Sbjct: 1276 ERVTQVAKKKMMLTHLVVRPGMGAKGTFSKQELDDILRFGTEELFKEEEGKEDEAIHYDD 1335

Query: 1258 TSIEEAV 1264
             +I + V
Sbjct: 1336 EAINQLV 1342



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 32/45 (71%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQK 122
           C IC  GG LLCCDSC   YH  CL+PPL  IP+G W+CP+C+ K
Sbjct: 487 CRICKDGGELLCCDSCTSAYHTFCLNPPLSEIPDGDWKCPRCSAK 531



 Score = 70.9 bits (172), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 4/52 (7%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           DGY  +    C +C  GG ++ CD+CPR YHL C DP L+  P G+W CP C
Sbjct: 408 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCFDPELEEAPEGRWSCPHC 459


>gi|427798209|gb|JAA64556.1| Putative chromatin remodeling complex wstf-iswi small subunit,
            partial [Rhipicephalus pulchellus]
          Length = 1386

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 289/653 (44%), Positives = 402/653 (61%), Gaps = 54/653 (8%)

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE-----KLDEPALEK-YSHLTDLFVQ 714
            W Q  R+I+ R+ +DG+    VKW  LPYD+ +WE     + + P L+K      DL   
Sbjct: 47   WLQVHRIINHRTLRDGSNLYLVKWRELPYDQSSWEAEEPGEFEIPDLQKAIQDYWDLRAS 106

Query: 715  FER-------------------QTLKKDASEDELPRGKGDCQQSEIVAL-------TEQP 748
             E                        +D  +D+   G+G     +   +       ++ P
Sbjct: 107  VENADQAPATSKKSSGGKSKSKSKKSRDLRDDDSRGGRGTPTSQDRTPVDPKRKYESQPP 166

Query: 749  EELKG-GALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLP 807
              L+    L P+QLE +NWLR  W    + ILADEMGLGKT+    F+ SL+ E   + P
Sbjct: 167  FVLENDNELHPYQLEGVNWLRFSWANHTDTILADEMGLGKTIQTIVFLYSLFKEGHCRGP 226

Query: 808  CLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN------- 860
             LV  PLST+ NW  EF +WAP+  VV Y G   +RA+IR++E+   +    N       
Sbjct: 227  FLVSAPLSTIINWEREFEVWAPDFYVVTYIGDKDSRAVIREHEFSFDEKAVRNPNKACRM 286

Query: 861  KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHR 920
            KK S+ KF+VLLT+YE++  D++ L  V W+VLVVDE HRLKN+ SK F +LN++   ++
Sbjct: 287  KKDSAVKFHVLLTSYELVCIDATILGSVDWQVLVVDEAHRLKNNQSKFFKVLNNYKINYK 346

Query: 921  VLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRR 980
            +LLTGTPLQNN+ E+++LLNFL P +F  L  F  +F DL   ++V++L  L+  H+LRR
Sbjct: 347  LLLTGTPLQNNLEELFHLLNFLSPQNFNDLQGFLNEFADLAKEEQVKKLHDLLGCHLLRR 406

Query: 981  LKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLR 1040
            LK D ++ +P K+E ++ V+L+ +Q +YY+ +LT+NY+ L N   G    S+LNI+M L+
Sbjct: 407  LKADVLKGMPSKSEFIIRVDLTPLQKKYYKYILTRNYEAL-NAKGGSHSVSLLNIMMDLK 465

Query: 1041 KVCNHPYLIPGTE---PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMT 1097
            K CNHPYL P      P   +  +      KA  KL LLH ML+ L + GHRVLIFSQMT
Sbjct: 466  KCCNHPYLFPAASQEAPRMPNGAYEGTALTKACGKLILLHKMLRHLKETGHRVLIFSQMT 525

Query: 1098 KLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGIN 1156
            K+LDI+ED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGIN
Sbjct: 526  KMLDIMEDFLEAE-GYK-YERIDGGITGSQRQEAIDRFNAPGAPQFCFLLSTRAGGLGIN 583

Query: 1157 LATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLML 1216
            LATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AKKK+ML
Sbjct: 584  LATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKKKMML 643

Query: 1217 DQLFV-------NKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEE 1262
              L V       + + S++E++DILR+GTEELF D  G     +  ++ ++EE
Sbjct: 644  THLVVRPGMGSRSNTMSKQELDDILRFGTEELFKDDEGKAEDTIHYDDKAVEE 696


>gi|442633513|ref|NP_001262078.1| Mi-2, isoform D [Drosophila melanogaster]
 gi|440216038|gb|AGB94771.1| Mi-2, isoform D [Drosophila melanogaster]
          Length = 1973

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 301/713 (42%), Positives = 426/713 (59%), Gaps = 84/713 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKV-----------------------------LAKRKLE 643
            E+ +KW   S  H  W+PE QL V                                ++++
Sbjct: 513  EYFIKWHNMSYWHCEWVPEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQ 572

Query: 644  NYKAKYGTTV---INICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDE 691
             +K K G        + +ER         W   QRVI+ R+++DG+    VKW  LPYD+
Sbjct: 573  RHKDKVGMKANDDAEVLEERFYKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDK 632

Query: 692  CTWEKLDE------PALEKYSHLTDLFVQFERQTLKK------------DASEDELPRGK 733
             TWE+  +       A++ Y  L  +      Q+  K            +  ED   +  
Sbjct: 633  STWEEEGDDIQGLRQAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHY 692

Query: 734  GDCQQSEIVALT----EQPEELKGGA--LFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
                +     L     +QP  L+G    L P+Q+E +NWLR  W +  + ILADEMGLGK
Sbjct: 693  TPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGK 752

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            T+    F+ SLY E   + P LV VPLST+ NW  EF LWAP+   + Y G   +RA+IR
Sbjct: 753  TIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIR 812

Query: 848  Q----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLK 902
            +    +E  A     +++ +T+ YKFNVLLT+YE+I  D++ L  + W VLVVDE HRLK
Sbjct: 813  ENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLK 872

Query: 903  NSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTT 962
            ++ SK F +LNS++  +++LLTGTPLQNN+ E+++LLNFL    F  L +F+ +F D++ 
Sbjct: 873  SNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK 932

Query: 963  TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN 1022
             ++V+ L +++ PHMLRRLK D ++N+P K+E +V VELS++Q ++Y+ +LTKNY+ L N
Sbjct: 933  EEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEAL-N 991

Query: 1023 IGKGVAQQSMLNIVMQLRKVCNHPYLIPG-TEPDSGSVEFLHEMR--IKASAKLTLLHSM 1079
               G    S++NI+M L+K CNHPYL P   E  + +   L+E+    KA+ KL LL  M
Sbjct: 992  SKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKM 1051

Query: 1080 LKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDK 1139
            LK L  + HRVLIFSQMTK+LDILED+L  E     YER+DG ++   RQ AI RFN   
Sbjct: 1052 LKQLKAQNHRVLIFSQMTKMLDILEDFLEGE--QYKYERIDGGITGTLRQEAIDRFNAPG 1109

Query: 1140 S-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVV 1198
            + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V 
Sbjct: 1110 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1169

Query: 1199 RASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGTEELFND 1244
            R SVEER+ Q+AK+K+ML  L V         + +++E++DILR+GTE+LF +
Sbjct: 1170 RNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKE 1222



 Score = 76.6 bits (187), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSCP  YH  CL+PPL  IP+G W+CP+C+
Sbjct: 431 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 473



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 69  KGNDGYYYE---CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +G DG +     C +C  GG ++ CD+CPR YHL CL+P L   P GKW CP C
Sbjct: 359 EGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 412


>gi|292606963|gb|ADE34162.1| chromodomain helicase DNA-binding protein 4 [Schmidtea mediterranea]
          Length = 1868

 Score =  525 bits (1351), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 321/798 (40%), Positives = 456/798 (57%), Gaps = 120/798 (15%)

Query: 606  KGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKY----------GTTVIN 655
            + +A   EF VK+   S  +  W+ E QL V     L NY  K           G+T   
Sbjct: 541  RQRAPMREFFVKFRDLSYWNCEWLTELQLDVHHPILLRNYFKKNDMDEPPAPEDGSTYKG 600

Query: 656  ICDER-------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK 696
               E+                   W Q  R+I   + ++ +    +KW  L YDECTWE+
Sbjct: 601  RAREKVADPHNLEERFYKWSVRPEWMQIHRIIDHMTHRNNSIWYLIKWRDLAYDECTWEQ 660

Query: 697  LD--------EPALEKYSHLTDLFV------QFERQTLKKDASEDELP--RGKGDCQQSE 740
            LD        +  +E+Y  +  LF       +F+  ++ K+    ++P      D ++  
Sbjct: 661  LDGEYEVIDMKHLVEEYHIMRKLFTGDIYKKKFKNSSIPKEIILKKIPPEHPTTDLKKR- 719

Query: 741  IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSL 798
               +++QP+ ++  GG L  +QLE LNWLR  +    + ILADEMGLGKT+    F+ SL
Sbjct: 720  ---MSKQPDYIEETGGKLHQYQLEGLNWLRFSFGNVVDTILADEMGLGKTIQTITFLYSL 776

Query: 799  YCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEW------- 851
            Y E  +K P LV  PLST+ NW  EF  WAP+  VV Y G   +RA++R++E+       
Sbjct: 777  YKEGHSKGPFLVAAPLSTVINWEREFEFWAPDFYVVTYVGDKDSRAVVREHEFSYEEGAM 836

Query: 852  HASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSL 911
              S      ++ +  KF+VLLT+YE+I  D + L  + WEVLVVDE HRLKN+ SK F +
Sbjct: 837  RTSKHACRMRQGTRTKFHVLLTSYELISIDQALLGSISWEVLVVDEAHRLKNNQSKFFRI 896

Query: 912  LNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKK 971
            L+S+   +++LLTGTPLQNN+ E+++LL+F+ P  F  +  F ++F D++  ++V+ L +
Sbjct: 897  LSSYKINYKLLLTGTPLQNNLEELFHLLHFMTPEKFNDMQGFLDEFADISKEEQVKRLHE 956

Query: 972  LVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQS 1031
            ++  H+LRRLK D + ++P K E +V VELS +QA++Y+ +LT+N+  L   G G +Q S
Sbjct: 957  ILGEHLLRRLKADVLTDMPSKGEFIVRVELSPMQAKFYKYILTRNFDALSVKGGG-SQIS 1015

Query: 1032 MLNIVMQLRKVCNHPYLIPGTEPDS-----GSVEFLHEMRIKASAKLTLLHSMLKVLYKE 1086
            ++NIVM L+K CNHPYL P    ++     G+ E L    IKAS KL LL+ ML  L   
Sbjct: 1016 LINIVMDLKKCCNHPYLFPSGSDEAPKLRNGAYEGL--ALIKASGKLELLYKMLPKLKTG 1073

Query: 1087 GHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFL 1145
            GHRVLIFSQMT+LLDILED+++   G K +ER+DG+V+   RQ +I RFN  D   FVFL
Sbjct: 1074 GHRVLIFSQMTRLLDILEDFMDY-MGYK-FERIDGAVTGQQRQDSIDRFNAPDSVSFVFL 1131

Query: 1146 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEER 1205
            LSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQS ++++YR V R +VEER
Sbjct: 1132 LSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQSNKVMIYRFVTRNTVEER 1191

Query: 1206 ILQLAKKKLMLDQLFV--------NKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENN 1257
            + Q+AKKK+ML  L V          S S+KE+++IL++GTE+LF        K+  EN 
Sbjct: 1192 VTQVAKKKMMLTHLVVRPGLGGKGGASMSKKELDEILKFGTEDLF--------KEKDEN- 1242

Query: 1258 TSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLA 1317
                                          E   KIV+D+ AI RL+DRS  Q G  +  
Sbjct: 1243 ------------------------------EDDHKIVYDDGAIDRLIDRS--QQGIEE-- 1268

Query: 1318 EGDLENDMLGSVKATEWN 1335
            + D+  D L S K   ++
Sbjct: 1269 KEDMMTDYLSSFKVAHYS 1286



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CPR +HL CLDP L+  P G W CP C
Sbjct: 368 CEVCQQGGEIMLCDTCPRAFHLVCLDPELEEAPEGSWSCPHC 409



 Score = 66.6 bits (161), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C  C  GG+L+CC  CP +YH +CL PPL  IP G W CP+C
Sbjct: 454 CNECKDGGDLICCAKCPVSYHPECLYPPLSEIPEGPWLCPRC 495


>gi|195020242|ref|XP_001985154.1| GH16907 [Drosophila grimshawi]
 gi|193898636|gb|EDV97502.1| GH16907 [Drosophila grimshawi]
          Length = 2013

 Score =  524 bits (1350), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 308/741 (41%), Positives = 434/741 (58%), Gaps = 89/741 (12%)

Query: 589  SVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK 648
            +V +R    A T  +   G  V  E+ +KW   S  H  W+ E QL V     + +++ K
Sbjct: 494  AVQRRDSSEASTSKSAKMGNRVR-EYFIKWHNMSYWHCDWVSEVQLDVHHPLMIRSFQRK 552

Query: 649  YGTT-------VINICDERWKQ------------------------------------PQ 665
            Y           ++  D R+K+                                     Q
Sbjct: 553  YDMEEPPKFEESLDEADTRFKRIQRHKDKVGMKGNDDDDEAALEERFYKNGVKPEWLIVQ 612

Query: 666  RVISLRSSKDGTREAFVKWTGLPYDECTWEKL--DEPAL-EKYSHLTDLFVQFERQTLKK 722
            RVI+ R+++DG+    VKW  LPYD+ TWE+   D P L +   +  DL      +  + 
Sbjct: 613  RVINHRTARDGSTMYLVKWRELPYDKSTWEEEGDDIPGLRQAIDYYQDLRAVCTSEQTRA 672

Query: 723  DASEDELPRGKG------DCQQSEIVALTEQPE----ELK-------------GGALFPH 759
              S+      K       D +   +   T  PE    +LK             G  L P+
Sbjct: 673  ATSKKNKKGRKTKHKLELDDEDRPVKHYTPPPEKPTTDLKKKYEGQPTFLDDTGMQLHPY 732

Query: 760  QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPN 819
            Q+E +NWLR  W +  + ILADEMGLGKT+    F+ SLY E   + P LV VPLST+ N
Sbjct: 733  QIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVN 792

Query: 820  WLAEFALWAPNLNVVEYHGCAKARAIIRQ----YEWHASDPDNLNK-KTSSYKFNVLLTT 874
            W  EF LWAP+   + Y G   +RA+IR+    +E  A     +++ +T+ YKFNVLLT+
Sbjct: 793  WEREFELWAPDFYCITYIGDKDSRAVIRENELTFEEGAIRGTKVSRLRTTQYKFNVLLTS 852

Query: 875  YEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGE 934
            YE+I  D+  L  + W VLVVDE HRLK++ SK F +LNS++  +++LLTGTPLQNN+ E
Sbjct: 853  YELISMDAPCLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYAIAYKLLLTGTPLQNNLEE 912

Query: 935  MYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTE 994
            +++LLNFL    F  L +F+ +F D++  ++V+ L +++ PHMLRRLK D ++N+P K+E
Sbjct: 913  LFHLLNFLSRDKFNDLQAFQGEFADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSE 972

Query: 995  RMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP-GTE 1053
             +V VELS++Q ++Y+ +LTKNY+ L N   G    S++NI+M L+K CNHPYL P  +E
Sbjct: 973  FIVRVELSAMQKKFYKFILTKNYEAL-NSKSGGGSCSLINIMMDLKKCCNHPYLFPSASE 1031

Query: 1054 PDSGSVEFLHEM--RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEF 1111
                S   ++E+    KA+ KL LL  MLK L  + HRVLIFSQMTK+LDILED+L  E 
Sbjct: 1032 EAPTSAGGIYELLSLTKAAGKLVLLSKMLKQLKSQNHRVLIFSQMTKMLDILEDFLEGE- 1090

Query: 1112 GPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDF 1170
                YER+DGS++   RQ AI RFN   + +FVFLLSTR+ GLGINLATADTVIIYDSD+
Sbjct: 1091 -QYKYERIDGSITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDW 1149

Query: 1171 NPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NK 1223
            NPH DIQA +RAHRIGQ+ ++++YR V R SVEER+ Q+AK+K+ML  L V         
Sbjct: 1150 NPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGA 1209

Query: 1224 SGSQKEVEDILRWGTEELFND 1244
            + +++E++DILR+GTE+LF +
Sbjct: 1210 NFTKQELDDILRFGTEDLFKE 1230



 Score = 76.6 bits (187), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSCP  YH  CL+PPL  IP+G W+CP+C+
Sbjct: 435 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 477



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 69  KGNDGYYYE---CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +G DG +     C +C  GG ++ CD+CPR YHL CL+P L   P GKW CP C
Sbjct: 363 EGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 416


>gi|391331672|ref|XP_003740267.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein Mi-2 homolog [Metaseiulus occidentalis]
          Length = 1925

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 303/732 (41%), Positives = 420/732 (57%), Gaps = 110/732 (15%)

Query: 606  KGKAVSYE-FLVKWVGKSNIHNSWIPESQLKV---------------------------- 636
            K + V Y  F +KW   S  H SW+ E QL+V                            
Sbjct: 488  KREPVKYRIFFIKWHDMSYWHCSWVSELQLEVFHPSLMRNYFRKNDMDEPPPAEDLPNHK 547

Query: 637  --LAKR-----KLENYKAKYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPY 689
              LAKR     +LE    KYG          W +  R+I+ R+ + G     VKW  L Y
Sbjct: 548  SSLAKRDKHYAELEEKYYKYGIK------PEWLEITRIINHRTYRAGQNVYLVKWRELDY 601

Query: 690  DECTWEKLDEPA------LEKY-----------------------------SHLTDLFVQ 714
              CTWE  D         ++KY                                 ++F +
Sbjct: 602  SACTWEVEDNGGEFEITDMDKYVKEYWDFRSLMEHTENVCNKKPGSKPSKSKKKVEVFGR 661

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKS 774
            F     +K + +   P+ K D Q   +V          G  L P+QLE +NWLR  W + 
Sbjct: 662  FSVPPFEKPSVD---PKKKYDGQPPYVVE--------NGNQLHPYQLEGINWLRFSWSQR 710

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
             + ILADEMGLGKT+    F+ SLY E  ++ P LV VPLST+ NW  EF LWAP + VV
Sbjct: 711  TDTILADEMGLGKTIQTITFLYSLYKEGLSRGPFLVAVPLSTLINWEREFELWAPEMYVV 770

Query: 835  EYHGCAKARAIIRQYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRG 887
             Y G   +RA+IR+ E+   D    +       KK +  KF+ LLT+YE+I  D + L  
Sbjct: 771  TYVGDKDSRAVIRENEFSFEDKAVRSSNKVFKMKKDAPIKFHCLLTSYELISMDQALLGS 830

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W VLVVDE HRLK++ SK F +L+ +  ++++LLTGTPLQNN+ E+++L+NFL PA+F
Sbjct: 831  IDWHVLVVDEAHRLKSNQSKFFKVLSQYPIRYKLLLTGTPLQNNLEELFHLMNFLSPANF 890

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
              L  F  +F D+   ++V++L  L+  H+LRRLK D +  +P K+E +V VELS IQ +
Sbjct: 891  NDLQGFLNEFADIAKEEQVKKLHDLLGCHLLRRLKADVLTGMPSKSEFIVRVELSPIQKK 950

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS---GSVEFLHE 1064
            YY+ +LT+NY  L +I  G    S+LNI+M L+K CNHP+L P  + ++    +  F   
Sbjct: 951  YYKWILTRNYDAL-SIKGGGQSVSLLNIMMDLKKCCNHPFLFPAAQAEAERLANGAFTVN 1009

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              +K+  K+ ++  M+++L ++GHRVLIFSQMTK+LD+LED+L  E G K YER+DG ++
Sbjct: 1010 SLVKSCGKMIVMQKMMRLLKEQGHRVLIFSQMTKMLDLLEDFLEGE-GYK-YERIDGGIT 1067

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQ AI RFN+ D  +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAH
Sbjct: 1068 GTMRQEAIDRFNKPDAEQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH 1127

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSGSQKEVEDILR 1235
            R+GQ+ ++++YR V RASVEER+ Q+AKKK+ML  L V        N + S++E++DILR
Sbjct: 1128 RLGQTNKVMIYRFVTRASVEERVTQVAKKKMMLTHLVVRPGMGRQGNAAMSKQELDDILR 1187

Query: 1236 WGTEELFNDSPG 1247
            +GTEELF D  G
Sbjct: 1188 FGTEELFKDEEG 1199



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 36/58 (62%)

Query: 63  RSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           +  +K K  D +   C  C  GG+LL CD CP +YH +C+ PPL R P+GKW CP+C 
Sbjct: 400 KGGSKTKDGDEHMEYCRTCKEGGDLLHCDQCPGSYHFECVFPPLNRPPSGKWTCPRCA 457



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 28/42 (66%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+C R YHL CL+P L+  P G+W CP C
Sbjct: 336 CEVCQQGGEVILCDTCVRAYHLVCLEPELEEPPEGRWSCPHC 377


>gi|256052547|ref|XP_002569826.1| chromodomain helicase DNA binding protein [Schistosoma mansoni]
 gi|353229870|emb|CCD76041.1| putative chromodomain helicase DNA binding protein [Schistosoma
            mansoni]
          Length = 1966

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 325/808 (40%), Positives = 449/808 (55%), Gaps = 134/808 (16%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKY----------GTTVINICDER-- 660
            EF VK+   S  H+ W+ E QL V     L NY  K           G+T      E+  
Sbjct: 587  EFFVKYSDLSYWHSEWLTELQLDVHHPIMLRNYFKKNDMEEPPLPEDGSTYRGRAREKVA 646

Query: 661  -----------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD----- 698
                             W QPQR+I  R+ + G     VKW  LPYDECTWE  D     
Sbjct: 647  DPHNLEERFYKWGVRPEWLQPQRIIDHRTGRGGQTWYLVKWRDLPYDECTWEARDGEVVD 706

Query: 699  -EPALEKYSHLTDLFVQFERQTLKKDASEDELPRGK----GDCQQSEIVALTEQPEELK- 752
             +  +E+Y  +  +F+     T+  D S   +   K    G     E+ A    PE L+ 
Sbjct: 707  MDKFIEEYRTMRKVFMGHLCSTVGPDGSLSVVSLCKRHKPGRRSSKELAAENLSPELLRK 766

Query: 753  ------------------------GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
                                     G L  +QLE +NWLR  +    + ILADEMGLGKT
Sbjct: 767  LPPDKCLTDLKKQYTSQPSFLDETDGQLHEYQLEGVNWLRFSFGNKIDTILADEMGLGKT 826

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +   AF+ SLY E   + P LV  PLST+ NW  EF  WAP+L VV Y G   +R +IR+
Sbjct: 827  IQTIAFLYSLYKEGHCRGPFLVAAPLSTIINWEREFEFWAPDLYVVSYIGDKDSRTVIRE 886

Query: 849  YEWHASD------PDNLNKKT-SSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRL 901
            +E+   +         +  +T +S +F+VLLT+YE+I  D + L  + WEVLVVDE HRL
Sbjct: 887  HEFSFDEGAVRGGAKAMKMRTGTSVRFHVLLTSYELISIDQALLGSIDWEVLVVDEAHRL 946

Query: 902  KNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLT 961
            KN+ SK F +L ++   +++LLTGTPLQNN+ E+++LL+F+ P  F  +  F ++F D++
Sbjct: 947  KNNQSKFFRILTTYKIGYKLLLTGTPLQNNLEELFHLLHFMTPEKFNDMQGFLDEFADIS 1006

Query: 962  TTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILR 1021
              ++V++L  ++  H+LRRLK D +Q++P K E +V VELS +Q  YY+ +LT+N++ L 
Sbjct: 1007 KEEQVKKLHDMLGQHLLRRLKADVLQDMPSKGEFIVRVELSPMQKRYYKFILTRNFEAL- 1065

Query: 1022 NIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS-----GSVEFLHEMRIKASAKLTLL 1076
            +   G +Q S++NI+M L+K CNHP+L P    ++     G+ E +  +R K S KL L+
Sbjct: 1066 SCRSGGSQVSLINIMMDLKKCCNHPFLFPSAAEEAQRMPNGAYEGVG-LR-KGSGKLELM 1123

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ LY+  HRVLIFSQMTK+LD+LED+L+ E G K +ER+DG+V+   RQ AI RFN
Sbjct: 1124 SKMLRKLYETKHRVLIFSQMTKMLDLLEDFLDSE-GYK-FERIDGAVTGQLRQDAIDRFN 1181

Query: 1137 Q-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
              D   F FLLSTR+ GLGINLA+ADTVIIYDSD+NPH DIQA +RAHRIGQS ++++YR
Sbjct: 1182 APDSLSFAFLLSTRAGGLGINLASADTVIIYDSDWNPHNDIQAFSRAHRIGQSNKVMIYR 1241

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFVNKS--------GSQKEVEDILRWGTEELFNDSPG 1247
             V R +VEER+ Q+AKKK+ML  L V            S+KE++DIL++GTE+LF     
Sbjct: 1242 FVTRGTVEERVTQVAKKKMMLTHLVVRPGLGGKGSCQMSKKELDDILKFGTEDLF----- 1296

Query: 1248 INGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRS 1307
                         +E    +E +H                     IV+D+ AI RLLDRS
Sbjct: 1297 -------------KEGEESMEDEH--------------------TIVYDDAAIERLLDRS 1323

Query: 1308 NLQSGSTDLAEGDLE-NDMLGSVKATEW 1334
              Q G   L E  LE ND L S K   +
Sbjct: 1324 --QQG---LEEKALEMNDYLTSFKVAHY 1346



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 54/110 (49%), Gaps = 11/110 (10%)

Query: 19  KRKRR--KLPCGPGLSNGKEENLVTSE---SPRNTPSAKRRLKNEINADRSSTKKKGNDG 73
           +RK+R  + P   G  NG    LV S    S  N    K   +  +   R+ TK    +G
Sbjct: 266 RRKQRAGRRPTAGG--NGPGSKLVDSSFLSSKVNHTHQKTTARFPLVVARTFTKIGEEEG 323

Query: 74  YYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           Y  +    C +C  GG ++ CD+CPR YHL CLDP L+  P G W CP C
Sbjct: 324 YETDHQDYCEVCQQGGEIMLCDTCPRAYHLVCLDPELEEAPEGTWSCPHC 373



 Score = 70.9 bits (172), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 30/42 (71%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C  C  GG+L+CCD+CP +YH+ CL PPL  IP G W CP+C
Sbjct: 423 CTECRDGGDLICCDNCPASYHIACLIPPLANIPEGVWLCPRC 464


>gi|17569817|ref|NP_510140.1| Protein CHD-3 [Caenorhabditis elegans]
 gi|6165993|sp|Q22516.2|CHD3_CAEEL RecName: Full=Chromodomain-helicase-DNA-binding protein 3 homolog;
            Short=CHD-3
 gi|3879819|emb|CAA91810.1| Protein CHD-3 [Caenorhabditis elegans]
 gi|11095331|gb|AAG29837.1| CHD-3 [Caenorhabditis elegans]
          Length = 1787

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 315/790 (39%), Positives = 435/790 (55%), Gaps = 97/790 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDE------------- 659
            EF VKW   +     W+ E+ + V     +  Y  K  +    I +E             
Sbjct: 426  EFFVKWKYLAYWQCEWLSETLMDVYFTALVRMYWRKVDSENPPIFEESTLSRHHSDHDPY 485

Query: 660  -------------RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD------EP 700
                          W Q  R+I+  S     ++  VKW  L Y+  TWE+ D      E 
Sbjct: 486  KLRERFYQYGVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWERDDTDIANYED 545

Query: 701  ALEKYSHLTDLFVQFE------------RQTLKKDASEDELPRGKGDCQQSEIVALTE-Q 747
            A+ KY H  +  +  E            R+       EDE+   +   ++ +I+   E Q
Sbjct: 546  AIIKYWHHRERMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKKREKIDILKKYEVQ 605

Query: 748  PEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAK 805
            P+ +   GG L P+QLE +NWLR CW    + ILADEMGLGKTV +  F+ +L  E   K
Sbjct: 606  PDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTK 665

Query: 806  LPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD------PDNL 859
             P L+  PLST+ NW  E  LW P+  VV Y G  ++R +IR++E+   D      P   
Sbjct: 666  GPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVS 725

Query: 860  NKKT-SSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQ 918
              KT  + KF+VLLT+YE I  D + L  + W  LVVDE HRLKN+ S  F  L  ++ Q
Sbjct: 726  KIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQ 785

Query: 919  HRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHML 978
            +RVLLTGTPLQNN+ E+++LLNFL P  F  L SF  +F++++   ++E+L  L+ PHML
Sbjct: 786  YRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSEISKEDQIEKLHNLLGPHML 845

Query: 979  RRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQ 1038
            RRLK D +  +P K E +V VELS++Q +YY+ +LT+N+  L N+  G  Q S++NI+M+
Sbjct: 846  RRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDAL-NVKNGGTQMSLINIIME 904

Query: 1039 LRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQ 1095
            L+K CNHPYL        P   +  +     IK + K  LL  ML+ L   GHRVLIFSQ
Sbjct: 905  LKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQ 964

Query: 1096 MTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLG 1154
            MT +LDILED+ ++E G K YER+DGS++   RQ AI R+N   ++ FVFLLSTR+ GLG
Sbjct: 965  MTMMLDILEDFCDVE-GYK-YERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLG 1022

Query: 1155 INLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKL 1214
            INLATADTVIIYDSD+NPH DIQA +RAHR+GQ  ++++YR V + SVEERI  +AKKK+
Sbjct: 1023 INLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKM 1082

Query: 1215 MLDQLFV--------NKSGSQKEVEDILRWGTEELFNDSPG-INGKDMGENNTSIEEAVR 1265
            +L  L V         KS S+ E++D+LRWGTEELF +    + G D GE  +S +    
Sbjct: 1083 LLTHLVVRAGLGAKDGKSMSKTELDDVLRWGTEELFKEEEAPVEGAD-GEGTSSKKP--- 1138

Query: 1266 DLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDM 1325
                                      +IVWD+ A+  LLDR+  + G     +    N+ 
Sbjct: 1139 -----------------------NEQEIVWDDAAVDFLLDRNKEEEGQDGEKKEHWTNEY 1175

Query: 1326 LGSVKATEWN 1335
            L S K   +N
Sbjct: 1176 LSSFKVATYN 1185



 Score = 70.1 bits (170), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C IC    N+L CD+CP +YH  C+DPPL  IP G+W CP+C
Sbjct: 331 CRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRC 372



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 12/94 (12%)

Query: 34  GKEENLVTSESPRNTPSAK-RRLKNEINADRSSTKKKGNDGYYYE-----CVICDLGGNL 87
           GKEE  +      N  +AK  + K  + + R+S + +   G   E     C +C+  G L
Sbjct: 224 GKEEARI------NRAAAKVDKRKAALESARASKRARKEQGVVEENHQENCEVCNQDGEL 277

Query: 88  LCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQ 121
           + CD+C R YH+ C+D  +++ P G W CP C +
Sbjct: 278 MLCDTCTRAYHVACIDENMEQPPEGDWSCPHCEE 311


>gi|195379440|ref|XP_002048487.1| GJ13998 [Drosophila virilis]
 gi|194155645|gb|EDW70829.1| GJ13998 [Drosophila virilis]
          Length = 2012

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 308/733 (42%), Positives = 432/733 (58%), Gaps = 89/733 (12%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTT--- 652
            E + ++SA+V  +    E+ +KW   S  H  W+ E QL V     + +++ KY      
Sbjct: 502  EASTSKSAKVGNRV--REYFIKWHNMSYWHCDWVSEVQLDVHHPLMIRSFQRKYDMEEPP 559

Query: 653  ----VINICDERWKQ------------------------------------PQRVISLRS 672
                 ++  D R+K+                                     QRVI+ R+
Sbjct: 560  KFEESLDEADTRFKRIQRHKDKVGMKGNDDDDEAALEERFYKNGVKPEWLIVQRVINHRT 619

Query: 673  SKDGTREAFVKWTGLPYDECTWEKL--DEPAL-EKYSHLTDLFV-----QFERQTLKKDA 724
            ++DG+    VKW  LPYD+ TWE+   D P L +   +  DL       Q    + KK  
Sbjct: 620  ARDGSTMYLVKWRELPYDKSTWEEEGDDIPGLRQAIDYYQDLRAVCTSEQSRGSSSKKSK 679

Query: 725  SEDELPRGKGDCQQSEIVALTEQPE----ELK-------------GGALFPHQLEALNWL 767
               +  + + D +   +   T  PE    +LK             G  L P+Q+E +NWL
Sbjct: 680  KGRKTKKLELDDEDRPVKHYTPPPEKPTTDLKKKYEGQPAFLDDTGMQLHPYQIEGINWL 739

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
            R  W +S + ILADEMGLGKT+    F+ SLY E   + P LV VPLST+ NW  EF LW
Sbjct: 740  RYSWGQSIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELW 799

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKK-----TSSYKFNVLLTTYEMILADS 882
            AP+   + Y G   +RA+IR+ E    +      K     T+ YKFNVLLT+YE+I  D+
Sbjct: 800  APDFYCITYIGDKDSRAVIRENELTFDEGAIRGTKVSRLRTTQYKFNVLLTSYELISMDA 859

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
              L  + W VLVVDE HRLK++ SK F +LNS++  +++LLTGTPLQNN+ E+++LLNFL
Sbjct: 860  PCLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYAIAYKLLLTGTPLQNNLEELFHLLNFL 919

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
                F  L +F+ +F D++  ++V+ L +++ PHMLRRLK D ++N+P K+E +V VELS
Sbjct: 920  SRDKFNDLQAFQGEFADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELS 979

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP-GTEPDSGSVEF 1061
            ++Q ++Y+ +LTKNY+ L N   G    S++NI+M L+K CNHPYL P   E    S   
Sbjct: 980  AMQKKFYKFILTKNYEAL-NSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEAPTSAGG 1038

Query: 1062 LHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
            ++E+    KA+ KL LL  MLK L  + HRVLIFSQMTK+LDILED+L  E     YER+
Sbjct: 1039 IYEINSLTKAAGKLVLLSKMLKQLKSQNHRVLIFSQMTKMLDILEDFLEGE--QYKYERI 1096

Query: 1120 DGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DGS++   RQ AI RFN   + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA
Sbjct: 1097 DGSITGTVRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQA 1156

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVE 1231
             +RAHRIGQ+ ++++YR V R SVEER+ Q+AK+K+ML  L V         + +++E++
Sbjct: 1157 FSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELD 1216

Query: 1232 DILRWGTEELFND 1244
            DILR+GTE+LF +
Sbjct: 1217 DILRFGTEDLFKE 1229



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSCP  YH  CL+PPL  IP+G W+CP+C+
Sbjct: 435 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 477



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 69  KGNDGYYYE---CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +G DG +     C +C  GG ++ CD+CPR YHL CL+P L   P GKW CP C
Sbjct: 363 EGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 416


>gi|281343214|gb|EFB18798.1| hypothetical protein PANDA_010098 [Ailuropoda melanoleuca]
          Length = 1318

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 290/602 (48%), Positives = 383/602 (63%), Gaps = 63/602 (10%)

Query: 753  GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLV 812
            GG L  +QLE LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   K P LV  
Sbjct: 50   GGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSA 109

Query: 813  PLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL---------NKKT 863
            PLST+ NW  EF +WAP   VV Y G   +RAIIR+ E+  S  DN           K+ 
Sbjct: 110  PLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEF--SFEDNAIKGGKKAFKMKRE 167

Query: 864  SSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLL 923
            +  KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ SK F +LN +   H++LL
Sbjct: 168  AQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLL 227

Query: 924  TGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKK 983
            TGTPLQNN+ E+++LLNFL P  F +L  F E+F D++   ++++L  L+ PHMLRRLK 
Sbjct: 228  TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKA 287

Query: 984  DAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVC 1043
            D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L + G G  Q S+LNI+M L+K C
Sbjct: 288  DVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG-NQVSLLNIMMDLKKCC 346

Query: 1044 NHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLL 1100
            NHPYL P      P   S  +     IKAS KL LL  +L+ L ++GHRVLIFSQMTK+L
Sbjct: 347  NHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKILRKLKEQGHRVLIFSQMTKML 406

Query: 1101 DILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLAT 1159
            D+LED+L+ E G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGINLAT
Sbjct: 407  DLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT 464

Query: 1160 ADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQL 1219
            ADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AK+K+ML  L
Sbjct: 465  ADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHL 524

Query: 1220 FV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHR 1272
             V     +K+G  S++E++DIL++GTEELF D      ++ GEN                
Sbjct: 525  VVRPGLGSKAGSMSKQELDDILKFGTEELFKD------ENEGENK--------------- 563

Query: 1273 KRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKAT 1332
                           E S+ I +D  AIARLLDR+   +  TD+      N+ L S K  
Sbjct: 564  --------------EEDSSVIHYDNEAIARLLDRNQDATEDTDVQN---MNEYLSSFKVA 606

Query: 1333 EW 1334
            ++
Sbjct: 607  QY 608


>gi|297802844|ref|XP_002869306.1| hypothetical protein ARALYDRAFT_328538 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297315142|gb|EFH45565.1| hypothetical protein ARALYDRAFT_328538 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1221

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 285/663 (42%), Positives = 414/663 (62%), Gaps = 51/663 (7%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--------KVLAKRKLENYKAKYGTTVINICDE----- 659
            ++ VKW GKS +H SW+PE +         ++  K +++ + A     +    DE     
Sbjct: 77   QYQVKWKGKSYLHCSWVPEQEFEKAYKSHPRLKLKSRVDKFNADKDKFIAENGDEYIAIR 136

Query: 660  -RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
              W    R+I+ R   D  +E  VK+  L Y+E  WE   E  + K+        Q E Q
Sbjct: 137  PEWTTVDRIIACRGRGD-FKEYLVKYKELSYEESYWES--ESLISKF--------QNEVQ 185

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
              K   S     +  G  +  +     E   E   G L  +QLE L +L+  W K  NVI
Sbjct: 186  RFKDINSRSRRDKYVGYKRNQKEFKQFEHTPEFLTGTLHTYQLEGLTFLKHSWSKGTNVI 245

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ + AF++SL+ E  +  P LV+ PLST+ NW  EFA WAP++NVV Y G
Sbjct: 246  LADEMGLGKTIQSIAFLASLFEENLS--PHLVVAPLSTLRNWEREFATWAPHMNVVMYTG 303

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
             ++AR +I ++E++         K    KF+VLLT+YEMI  D+S L+ + W  ++VDEG
Sbjct: 304  TSEARDVIWEHEFYFP-------KGRKIKFDVLLTSYEMINQDTSVLKPIKWTCMIVDEG 356

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN  SKL+S LN F+ +HRVLLTGTPLQNN+ E++ L++FL    F S+ +F+++F 
Sbjct: 357  HRLKNKDSKLYSSLNQFTSKHRVLLTGTPLQNNLDELFVLMHFLDAVKFASMENFQKEFK 416

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQN-IPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
            D+   +++  L +++APH+LRRLKKD +++ +PPK E ++ V+LSS Q E Y+A++T NY
Sbjct: 417  DINQEKQISRLHQMLAPHLLRRLKKDVLKDKMPPKKELILRVDLSSQQKEVYKAVITNNY 476

Query: 1018 QIL-RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLL 1076
            Q+L +  G  ++     N++M LRKVC+HPYL+   EP            ++AS KL LL
Sbjct: 477  QVLTKKRGAKIS-----NVLMDLRKVCSHPYLLKDVEPRLEDANEAFTKLLEASGKLQLL 531

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              M+  L ++GHRVLI+SQ    LD+ +DY +  F    YER+DG V   +RQA+I RFN
Sbjct: 532  DKMMVKLKEQGHRVLIYSQFQHTLDLFQDYCS--FKSWKYERIDGKVGGAERQASIDRFN 589

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
             + S RF FLL+TR+ G+GINLATADTVIIYDSD+NPHAD+QAM RAHR+GQ+ ++++YR
Sbjct: 590  AENSNRFCFLLTTRAGGIGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYR 649

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV----NKSGSQKEVEDILRWGTEELF---NDSPGI 1248
            L+ RA+VEER++++ KKK++L+ L V    N    Q  ++DI+++G++ELF   ND  G 
Sbjct: 650  LIHRATVEERMVEITKKKMLLEHLVVGNMENPHLRQDVLDDIIKYGSKELFSEENDEAGK 709

Query: 1249 NGK 1251
            +GK
Sbjct: 710  SGK 712


>gi|195428619|ref|XP_002062369.1| GK17504 [Drosophila willistoni]
 gi|194158454|gb|EDW73355.1| GK17504 [Drosophila willistoni]
          Length = 2023

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 298/716 (41%), Positives = 424/716 (59%), Gaps = 87/716 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTT-------VINICDERWKQ-- 663
            E+ +KW   S  H  W+ E QL V     + +++ KY           ++  D R+K+  
Sbjct: 530  EYFIKWHNMSYWHCEWVSEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRFKRIQ 589

Query: 664  ----------------------------------PQRVISLRSSKDGTREAFVKWTGLPY 689
                                               QRVI+ R+++DG+    VKW  LPY
Sbjct: 590  RHKDKVGMKGGDDDDEQQLEEKFYKNGVKPEWLIVQRVINHRTARDGSSMYLVKWRELPY 649

Query: 690  DECTWEKLDE------PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKG--DCQQSEI 741
            D+ TWE+  +       A++ Y  L  +      ++  K   +    + K   D +   +
Sbjct: 650  DKSTWEEEGDDIQGLRQAIDYYQDLRAVCTSENTRSSSKKNKKGRKTKSKVELDDEDRPV 709

Query: 742  VALTEQPE-----------------ELKGGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
               T  P+                 E  G  L P+Q+E +NWLR  W +  + ILADEMG
Sbjct: 710  KHYTPPPDKPTTDLKKKYEGQPAFLENTGMQLHPYQIEGINWLRYSWGQGIDTILADEMG 769

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKT+    F+ SLY E   + P LV VPLST+ NW  EF LWAP+   + Y G   +RA
Sbjct: 770  LGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRA 829

Query: 845  IIRQ----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
            +IR+    +E  A     +++ +T+ YKFNVLLT+YE+I  D+  L  + W VLVVDE H
Sbjct: 830  VIRENELSFEEGAIRGTKVSRLRTTQYKFNVLLTSYELISMDAPCLGSIDWAVLVVDEAH 889

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLK++ SK F +LNS++  +++LLTGTPLQNN+ E+++LLNFL    F  L +F+ +F D
Sbjct: 890  RLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFAD 949

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++  ++V+ L +++ PHMLRRLK D ++N+P K+E +V VELS++Q ++Y+ +LTKNY+ 
Sbjct: 950  VSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEA 1009

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS-GSVEFLHEMR--IKASAKLTLL 1076
            L N   G    S++NI+M L+K CNHPYL P    ++  S   L+E+    KA+ KL LL
Sbjct: 1010 L-NSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEALTSAGGLYEINSLTKAAGKLVLL 1068

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              MLK L  + HRVLIFSQMTK+LDILED+L  E     YER+DGS++   RQ AI RFN
Sbjct: 1069 SKMLKQLKSQNHRVLIFSQMTKMLDILEDFLEGE--QYKYERIDGSITGAVRQEAIDRFN 1126

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1127 APGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1186

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGTEELFND 1244
             V R SVEER+ Q+AK+K+ML  L V         + +++E++DILR+GTE+LF +
Sbjct: 1187 FVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKE 1242



 Score = 76.6 bits (187), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSCP  YH  CL+PPL  IP+G W+CP+C+
Sbjct: 446 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 488



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 69  KGNDGYYYE---CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +G DG +     C +C  GG ++ CD+CPR YHL CL+P L   P GKW CP C
Sbjct: 374 EGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 427


>gi|198466497|ref|XP_002135204.1| GA23929 [Drosophila pseudoobscura pseudoobscura]
 gi|198150627|gb|EDY73831.1| GA23929 [Drosophila pseudoobscura pseudoobscura]
          Length = 2036

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 300/714 (42%), Positives = 428/714 (59%), Gaps = 85/714 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTT-------VINICDERWKQ-- 663
            E+ +KW   S  H  W+ E QL V     + +++ KY           ++  D R+K+  
Sbjct: 527  EYFIKWHNMSYWHCEWVAEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRFKRIQ 586

Query: 664  ---------------------------------PQRVISLRSSKDGTREAFVKWTGLPYD 690
                                              QRVI+ R+++DG+    VKW  LPYD
Sbjct: 587  RHKDKVGMKADDDDEEQLEERFYKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYD 646

Query: 691  ECTWEKLDE------PALEKYSHLTDLFV-QFERQTLKKDASEDELPRGKGDCQQSEIVA 743
            + TWE+  +       A++ Y  L  +   +  R + KK     +  + + D +   +  
Sbjct: 647  KSTWEEEGDDIQGLRQAIDYYQDLRAVCTSENTRSSSKKSKKGRKSKKMELDDEDRPVKH 706

Query: 744  LTEQPE----ELK-------------GGALFPHQLEALNWLRKCWHKSKNVILADEMGLG 786
             T  PE    +LK             G  L P+Q+E +NWLR  W ++ + ILADEMGLG
Sbjct: 707  YTPPPEKPTTDLKKKYEGQPAFLDETGMQLHPYQIEGINWLRYSWGQAIDTILADEMGLG 766

Query: 787  KTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAII 846
            KT+    F+ SLY E   + P LV VPLST+ NW  EF LWAP+   + Y G   +RA+I
Sbjct: 767  KTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVI 826

Query: 847  RQ----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRL 901
            R+    +E  A     +++ +T+ YKFNVLLT+YE+I  D++ L  + W VLVVDE HRL
Sbjct: 827  RENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRL 886

Query: 902  KNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLT 961
            K++ SK F +LNS+S  +++LLTGTPLQNN+ E+++LLNFL    F  L +F+ +F D++
Sbjct: 887  KSNQSKFFRILNSYSIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVS 946

Query: 962  TTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILR 1021
              ++V+ L +++ PHMLRRLK D ++N+P K+E +V VELS++Q ++Y+ +LTKNY+ L 
Sbjct: 947  KEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEAL- 1005

Query: 1022 NIGKGVAQQSMLNIVMQLRKVCNHPYLIP-GTEPDSGSVEFLHEMR--IKASAKLTLLHS 1078
            N   G    S++NI+M L+K CNHPYL P   E    +   L+E+    KA+ KL LL  
Sbjct: 1006 NSKTGGGSCSLINIMMDLKKCCNHPYLFPSAAEEAQTAAGGLYEINSLTKAAGKLVLLSK 1065

Query: 1079 MLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQD 1138
            ML+ L  + HRVLIFSQMTK+LDILED+L  E     YER+DG ++   RQ AI RFN  
Sbjct: 1066 MLRQLKSQNHRVLIFSQMTKMLDILEDFLEGE--QYKYERIDGGITGTVRQEAIDRFNAP 1123

Query: 1139 KS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLV 1197
             + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V
Sbjct: 1124 GAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFV 1183

Query: 1198 VRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGTEELFND 1244
             R SVEER+ Q+AK+K+ML  L V         + +++E++DILR+GTE+LF +
Sbjct: 1184 TRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKE 1237



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 31/43 (72%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSCP  YH  CL+P L  IP+G W+CP+C+
Sbjct: 437 CRVCKDGGELLCCDSCPSAYHTFCLNPALDTIPDGDWRCPRCS 479



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 69  KGNDGYYYE---CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +G DG +     C +C  GG ++ CD+CPR YHL CL+P L   P GKW CP C
Sbjct: 365 EGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 418


>gi|242023690|ref|XP_002432264.1| Chromodomain helicase-DNA-binding protein, putative [Pediculus
            humanus corporis]
 gi|212517673|gb|EEB19526.1| Chromodomain helicase-DNA-binding protein, putative [Pediculus
            humanus corporis]
          Length = 1999

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 304/703 (43%), Positives = 415/703 (59%), Gaps = 80/703 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQ-----LKVLAKRKLENYKAKYGT-------TVINICDER 660
            E+ VKW  KS  H +W+ E Q     L V     L NY  K+           I+  D R
Sbjct: 499  EYFVKWAEKSYWHCAWVSELQASIYTLDVAHPLMLRNYTRKFDMDEPPKMDEAIDDSDYR 558

Query: 661  --------------------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTW 694
                                      W    R+++ R+ +DG     VKW  L YD+ TW
Sbjct: 559  MKKIKEFGANDNLLEEKYYKFGIRPEWMIVHRILNHRTMRDGRTLYLVKWRDLCYDQATW 618

Query: 695  EKLDE--PALEK-YSHLTDLFVQFERQTLK--------------KDASEDELPRGKGDCQ 737
            E+  E  P L++   +  DL   F     K              +D  +  +PR      
Sbjct: 619  EEETEEIPGLKQAIEYYLDLRATFNTDGKKGKKGRGKKPKTKELQDEDDSRMPRRYTPPP 678

Query: 738  QSEIVALTE----QPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSA 791
            +  +  L++    QP+ +   G  L  +Q+E LNWLR  W +  + ILADEMGLGKT+  
Sbjct: 679  EKPLTNLSKKLDKQPDYIDATGMQLHEYQMEGLNWLRYSWGQGIDTILADEMGLGKTIQT 738

Query: 792  CAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ--- 848
              F+ SLY E   K P LV  PLST+ NW  EF  WAP+   V Y G   +RA+IR+   
Sbjct: 739  ITFLYSLYKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYCVTYVGDKDSRAVIRENEL 798

Query: 849  -YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGS 906
             +E  A       K K SS KFNVLLT+YE++  D++ L  + W VLVVDE HRLK++ S
Sbjct: 799  SFEEGAVRGSRATKIKASSIKFNVLLTSYELVSIDAACLGSIDWAVLVVDEAHRLKSNQS 858

Query: 907  KLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKV 966
            K F +L  ++  +++LLTGTPLQNN+ E+++LLNF+    F  L++F+ +F D++  ++V
Sbjct: 859  KFFRVLAGYNISYKLLLTGTPLQNNLEELFHLLNFMCRDKFSDLAAFQNEFADISKEEQV 918

Query: 967  EELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKG 1026
             +L  L+ PHMLRRLK D ++N+P K+E +V VELS +Q +YY+ +LT+N++ L   G G
Sbjct: 919  TKLHDLLGPHMLRRLKTDVLKNMPAKSEFIVRVELSPMQKKYYKWILTRNFEALNPKGGG 978

Query: 1027 VAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVL 1083
              Q S+LNI+M L+K CNHPYL        P S +  +  +  IKAS KL LL  MLK+L
Sbjct: 979  -QQVSLLNIMMDLKKCCNHPYLFSAAAEEAPLSANGTYELQGLIKASGKLILLSKMLKLL 1037

Query: 1084 YKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RF 1142
             ++GHRVLIFSQMTK+LD+LEDYL  E G K YER+DGS++   RQ AI RFN   + +F
Sbjct: 1038 REQGHRVLIFSQMTKMLDLLEDYLEGE-GYK-YERIDGSITGNLRQEAIDRFNAPGAPQF 1095

Query: 1143 VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASV 1202
             FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQS ++++YR V R SV
Sbjct: 1096 AFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQSNKVMIYRFVTRNSV 1155

Query: 1203 EERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGT 1238
            EER+ Q+AK+K+ML  L V       N + +++E++DILR+GT
Sbjct: 1156 EERVTQVAKRKMMLTHLVVRPGMGGKNTNFTKQELDDILRFGT 1198



 Score = 76.6 bits (187), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 4/74 (5%)

Query: 52  KRRLKNEINADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPN 111
           KR+ K ++N  +S  +++  D     C +C  GG ++ CD+CPR YHL CLDP L+  P 
Sbjct: 332 KRKPKRKMNDSKSGEQQEHQD----YCEVCQQGGEIILCDTCPRAYHLVCLDPELEETPE 387

Query: 112 GKWQCPKCTQKNDQ 125
           GKW CP C  +  Q
Sbjct: 388 GKWSCPHCEAEGTQ 401



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 39/55 (70%)

Query: 66  TKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           T+++ +D +   C +C  GG LLCCDSC   YH+ CL+PPL  IP+G W+CP+C+
Sbjct: 400 TQEQDDDEHNEFCRLCKDGGELLCCDSCTSAYHIFCLNPPLSEIPDGDWKCPRCS 454


>gi|157134600|ref|XP_001663323.1| chromodomain helicase DNA binding protein [Aedes aegypti]
 gi|108870421|gb|EAT34646.1| AAEL013136-PA [Aedes aegypti]
          Length = 1983

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 320/793 (40%), Positives = 441/793 (55%), Gaps = 130/793 (16%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGT---- 651
            EP+ +++   + +    E+ VK+   S  H  WI E QL V        Y  KY      
Sbjct: 506  EPSTSKATPTRRR----EYFVKFADMSFWHCDWITELQLDVYHPLMYRFYIRKYDMEEPP 561

Query: 652  TVINICDER--------------------------------WKQPQRVISLRSSKDGTRE 679
             +  + DE                                 W    RVI+ R+ +DG   
Sbjct: 562  KLEEMLDEEDGRYKRLLKIREGDQDESELEEKYYKYGVKPEWLMVHRVINHRTMRDGRTL 621

Query: 680  AFVKWTGLPYDECTWEKLDE--PALEK-YSHLTDLFVQFERQTL---------------- 720
             FVKW  LPYD+CTWE+ D+  P L+    +  DL      +                  
Sbjct: 622  YFVKWRDLPYDQCTWEEDDDEIPGLKNAVEYYLDLRANCNNEMGNSSSSKKNKKKGRKSR 681

Query: 721  -KKDASEDELPRGKGDCQQSEIVALTE----QPEEL--KGGALFPHQLEALNWLRKCWHK 773
             K+   +D + +            L      QP  L   G  L P+QLE +NWLR  W  
Sbjct: 682  AKELEDDDRISKRYTPPPDKPTTDLKRKFEVQPSYLDDTGMRLHPYQLEGINWLRYSWAN 741

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
              + ILADEMGLGKT+    F+ SLY E   + P LV VPLST+ NW  EF  WAP+L  
Sbjct: 742  DTDTILADEMGLGKTIQTATFLYSLYKEGHCRGPFLVAVPLSTIINWEREFETWAPDLYC 801

Query: 834  VEYHGCAKARAIIRQYEWH----ASDPDNLNK-KTSSYKFNVLLTTYEMILADSSHLRGV 888
            + Y G   +RAIIR++E      A      +K + S+ KFNVLLT+YEM+  D++ L  +
Sbjct: 802  ITYVGDKDSRAIIREHELSFEEGAVRGGRASKIRASTLKFNVLLTSYEMVSFDAACLGSI 861

Query: 889  PWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 948
             W  LVVDE HRLK++ SK F  L+++S  +++LLTGTPLQNN+ E+++LLNFL    F 
Sbjct: 862  EWAALVVDEAHRLKSNQSKFFKTLSNYSINYKLLLTGTPLQNNLEELFHLLNFLNKNKFN 921

Query: 949  SLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEY 1008
             L++F+ +F D+    +V++L +++ PHMLRRLK D ++N+P K+E +V VELS +Q +Y
Sbjct: 922  DLTTFQAEFADINKEDQVKKLHEMLGPHMLRRLKADVLKNMPTKSEFIVRVELSQMQKKY 981

Query: 1009 YRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS-----GSVEFLH 1063
            Y+ +LT+N++ L   G G A  S++NI+M L+K CNHPYL      ++     GS E   
Sbjct: 982  YKYILTRNFEALNPRGGGGA-CSLINIMMDLKKCCNHPYLFQAAVEEAPLGPGGSYEI-- 1038

Query: 1064 EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
            +   KA+ KL LL  MLK L ++GHRVLIFSQMTK+LDILED+L   FG K YER+DG +
Sbjct: 1039 QSLTKAAGKLVLLEKMLKQLKEQGHRVLIFSQMTKMLDILEDFLE-GFGYK-YERIDGGI 1096

Query: 1124 SVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
            +   RQ AI RFN   + +F FLLST++ GLGINLATADTVIIYDSD+NPH DIQA +RA
Sbjct: 1097 TGTLRQEAIDRFNAPGAQQFCFLLSTKAGGLGINLATADTVIIYDSDWNPHNDIQAFSRA 1156

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILR 1235
            HRIGQ+ ++++YR V R SVEER+ Q+AK+K+ML  L V         + +++E++DILR
Sbjct: 1157 HRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILR 1216

Query: 1236 WGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVW 1295
            +GTEELF +    +GKD        EEA+                              +
Sbjct: 1217 FGTEELFKE----DGKD--------EEAIH-----------------------------Y 1235

Query: 1296 DENAIARLLDRSN 1308
            D+ A+A LLDRSN
Sbjct: 1236 DDKAVAELLDRSN 1248



 Score = 74.7 bits (182), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 31/43 (72%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG +LCCDSCP  YH  CL PPL  IP+G W+CP+C+
Sbjct: 439 CRVCKDGGEMLCCDSCPSAYHTWCLTPPLDDIPDGDWRCPRCS 481



 Score = 70.1 bits (170), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 3/54 (5%)

Query: 69  KGNDGYYYE---CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +G DG +     C +C  GG ++ CD+CP+ YHL CLDP L+  P GKW CP C
Sbjct: 369 EGEDGEFEHQDYCEVCQQGGEIILCDTCPKAYHLVCLDPELEDTPEGKWSCPTC 422


>gi|355766839|gb|EHH62560.1| hypothetical protein EGM_20938, partial [Macaca fascicularis]
          Length = 1262

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 299/613 (48%), Positives = 393/613 (64%), Gaps = 57/613 (9%)

Query: 742  VALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLY 799
            V    QPE L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY
Sbjct: 36   VKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLY 95

Query: 800  CEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD---- 855
             E  +K P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D    
Sbjct: 96   KEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIR 155

Query: 856  ---PDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLL 912
                 +  KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +L
Sbjct: 156  GGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVL 215

Query: 913  NSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKL 972
            N +S QH++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  +
Sbjct: 216  NGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDM 275

Query: 973  VAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSM 1032
            + PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L   G G  Q S+
Sbjct: 276  LGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGG-NQVSL 334

Query: 1033 LNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHR 1089
            LN+VM L+K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHR
Sbjct: 335  LNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHR 394

Query: 1090 VLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLST 1148
            VLIFSQMTK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   + +F FLLST
Sbjct: 395  VLIFSQMTKMLDLLEDFLEHE-GYK-YERIDGGITGNMRQEAIDRFNAPGAQQFCFLLST 452

Query: 1149 RSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQ 1208
            R+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V RASVEERI Q
Sbjct: 453  RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQ 512

Query: 1209 LAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIE 1261
            +AKKK+ML  L V     +K+G  S++E++DIL++GTEELF D     G D         
Sbjct: 513  VAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD--------- 563

Query: 1262 EAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDL 1321
                                  +K  E S+ I +D+ AI RLLDR+  ++  T+L +G  
Sbjct: 564  ----------------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTEL-QG-- 598

Query: 1322 ENDMLGSVKATEW 1334
             N+ L S K  ++
Sbjct: 599  MNEYLSSFKVAQY 611


>gi|195166785|ref|XP_002024215.1| GL22908 [Drosophila persimilis]
 gi|194107570|gb|EDW29613.1| GL22908 [Drosophila persimilis]
          Length = 1898

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 300/714 (42%), Positives = 428/714 (59%), Gaps = 85/714 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTT-------VINICDERWKQ-- 663
            E+ +KW   S  H  W+ E QL V     + +++ KY           ++  D R+K+  
Sbjct: 385  EYFIKWHNMSYWHCEWVAEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRFKRIQ 444

Query: 664  ---------------------------------PQRVISLRSSKDGTREAFVKWTGLPYD 690
                                              QRVI+ R+++DG+    VKW  LPYD
Sbjct: 445  RHKDKVGMKADDDDEEQLEERFYKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYD 504

Query: 691  ECTWEKLDE------PALEKYSHLTDLFV-QFERQTLKKDASEDELPRGKGDCQQSEIVA 743
            + TWE+  +       A++ Y  L  +   +  R + KK     +  + + D +   +  
Sbjct: 505  KSTWEEEGDDIQGLRQAIDYYQDLRAVCTSENTRSSSKKSKKGRKSKKMELDDEDRPVKH 564

Query: 744  LTEQPE----ELK-------------GGALFPHQLEALNWLRKCWHKSKNVILADEMGLG 786
             T  PE    +LK             G  L P+Q+E +NWLR  W ++ + ILADEMGLG
Sbjct: 565  YTPPPEKPTTDLKKKYEGQPAFLDETGMQLHPYQIEGINWLRYSWGQAIDTILADEMGLG 624

Query: 787  KTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAII 846
            KT+    F+ SLY E   + P LV VPLST+ NW  EF LWAP+   + Y G   +RA+I
Sbjct: 625  KTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVI 684

Query: 847  RQ----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRL 901
            R+    +E  A     +++ +T+ YKFNVLLT+YE+I  D++ L  + W VLVVDE HRL
Sbjct: 685  RENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRL 744

Query: 902  KNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLT 961
            K++ SK F +LNS+S  +++LLTGTPLQNN+ E+++LLNFL    F  L +F+ +F D++
Sbjct: 745  KSNQSKFFRILNSYSIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVS 804

Query: 962  TTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILR 1021
              ++V+ L +++ PHMLRRLK D ++N+P K+E +V VELS++Q ++Y+ +LTKNY+ L 
Sbjct: 805  KEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEAL- 863

Query: 1022 NIGKGVAQQSMLNIVMQLRKVCNHPYLIP-GTEPDSGSVEFLHEMR--IKASAKLTLLHS 1078
            N   G    S++NI+M L+K CNHPYL P   E    +   L+E+    KA+ KL LL  
Sbjct: 864  NSKTGGGSCSLINIMMDLKKCCNHPYLFPSAAEEAQTAAGGLYEINSLTKAAGKLVLLSK 923

Query: 1079 MLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQD 1138
            ML+ L  + HRVLIFSQMTK+LDILED+L  E     YER+DG ++   RQ AI RFN  
Sbjct: 924  MLRQLKSQNHRVLIFSQMTKMLDILEDFLEGE--QYKYERIDGGITGTVRQEAIDRFNAP 981

Query: 1139 KS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLV 1197
             + +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V
Sbjct: 982  GAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFV 1041

Query: 1198 VRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGTEELFND 1244
             R SVEER+ Q+AK+K+ML  L V         + +++E++DILR+GTE+LF +
Sbjct: 1042 TRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKE 1095



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 31/43 (72%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSCP  YH  CL+P L  IP+G W+CP+C+
Sbjct: 295 CRVCKDGGELLCCDSCPSAYHTFCLNPALDTIPDGDWRCPRCS 337



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 69  KGNDGYYYE---CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +G DG +     C +C  GG ++ CD+CPR YHL CL+P L   P GKW CP C
Sbjct: 223 EGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 276


>gi|307199491|gb|EFN80104.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
            [Harpegnathos saltator]
          Length = 1948

 Score =  518 bits (1333), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 314/736 (42%), Positives = 416/736 (56%), Gaps = 111/736 (15%)

Query: 595  QEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGT--- 651
            +EP+ +++A  + K    EF VKW   S  H  WI E QL V       NY  KY     
Sbjct: 498  EEPSTSKAAPKQRKM--REFFVKWADMSYWHCDWITELQLDVFHPLMYRNYYRKYDMDEP 555

Query: 652  ----TVINICDER------------------------------WKQPQRVISLRSSKDGT 677
                  ++  D R                              W    RVI+ R  +DG 
Sbjct: 556  PKLEEPLDESDSRMKRLKEQDGATNRDEYNLEERFYRYGVRPEWLVVHRVINHRLQRDGR 615

Query: 678  REAFVKWTGLPYDECTWEKLDE------PALEKYSHL----------------------- 708
                VKW  L YD+ TWE   E       A+E Y  L                       
Sbjct: 616  ATYLVKWRELGYDQATWEDEHEDIPGLKQAIEYYLDLRAANCCDGSSSRKGKKGKGKKSK 675

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNW 766
            T   +  E +T K+     + P    D ++        QPE L   G  L P+QLE LNW
Sbjct: 676  TREIIDDEERTPKRYTPPPDKP--TTDLKKK----YERQPEYLDQTGMQLHPYQLEGLNW 729

Query: 767  LRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFAL 826
            LR  W +  + ILADEMGLGKT+    F+ SLY E   K P LV VPLST+ NW  EF  
Sbjct: 730  LRYSWGQGIDTILADEMGLGKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFET 789

Query: 827  WAPNLNVVEYHGCAKARAIIRQ----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILAD 881
            WAP+   V Y G   +R +IR+    +E  A      +K ++SS KFNVLLT+YE+I  D
Sbjct: 790  WAPDFYCVTYVGDKDSRIVIRENELSFEEGAVRSGRASKIRSSSIKFNVLLTSYELISID 849

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
            S+ L  + W VLVVDE HRLK++ SK F LL S++  +++LLTGTPLQNN+ E+++LLNF
Sbjct: 850  SACLGSIDWAVLVVDEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNF 909

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L    F  L++F+ +F D++  ++V++L +++ PHMLRRLK D ++N+P K+E +V VEL
Sbjct: 910  LCRDKFNDLAAFQNEFADISKEEQVKKLHEMLGPHMLRRLKADVLKNMPSKSEFIVRVEL 969

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE---PDSGS 1058
            S +Q +YY+ +LT+N++ L   G G  Q S+LNI+M L+K CNHPYL P      P   +
Sbjct: 970  SPMQKKYYKYILTRNFEALNPKGGG-QQVSLLNIMMDLKKCCNHPYLFPAASQEAPTGPN 1028

Query: 1059 VEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
              +     IKA+ KL LL  MLK L  +GHRVLIFSQMTK+LDILEDYL  E G K YER
Sbjct: 1029 GSYETSALIKAAGKLVLLSKMLKKLRGDGHRVLIFSQMTKMLDILEDYLEGE-GYK-YER 1086

Query: 1119 VDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            +DG+                  +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA
Sbjct: 1087 IDGA-----------------QQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQA 1129

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVE 1231
             +RAHRIGQ+ ++++YR V R SVEER+ Q+AK+K+ML  L V         + S++E++
Sbjct: 1130 FSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFSKQELD 1189

Query: 1232 DILRWGTEELFNDSPG 1247
            DILR+GTEELF +  G
Sbjct: 1190 DILRFGTEELFKEEEG 1205



 Score = 74.7 bits (182), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 31/43 (72%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSC   YH  CL+PPL  IP+G W+CP+C+
Sbjct: 431 CRVCKDGGELLCCDSCTSAYHTHCLNPPLSEIPDGDWKCPRCS 473



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CPR YHL CL+P L+  P GKW CP C
Sbjct: 371 CEVCQQGGEIILCDTCPRAYHLVCLEPELEETPEGKWSCPHC 412


>gi|156379809|ref|XP_001631648.1| predicted protein [Nematostella vectensis]
 gi|156218692|gb|EDO39585.1| predicted protein [Nematostella vectensis]
          Length = 824

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 302/713 (42%), Positives = 418/713 (58%), Gaps = 121/713 (16%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKV------------------------------------ 636
            EF VKW  KS  H SWI E Q+++                                    
Sbjct: 103  EFFVKWREKSYWHCSWITELQIEIQHPEMFRAFSRKNDMDEPPPLSDDDDEDSIEDGQHP 162

Query: 637  --LAKRKLE-----NYKAKYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPY 689
               AK K +     N +A++    +N     W Q  R+++ R  KDG+ E FVKW  +PY
Sbjct: 163  SPTAKSKAKEQDENNLEARFYRYGVN---PEWLQINRIMNHRVLKDGSEEFFVKWRDVPY 219

Query: 690  DECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPE 749
             + TWE  D+P   + S++                          +C++       +QP 
Sbjct: 220  SQSTWESPDDPINHQISYI--------------------------NCKER----YEKQPA 249

Query: 750  EL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLP 807
             L   GG L  +Q E LNWLR  W +  N ILADEMGLGKT+   +F+ SL  E  ++ P
Sbjct: 250  YLDETGGKLHEYQREGLNWLRFSWAQGTNTILADEMGLGKTIQTISFLYSLMKEGHSQGP 309

Query: 808  CLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN------- 860
             LV  PLST+ NW  EF  WAP++ VV Y G  ++RA IR +++ + D D          
Sbjct: 310  FLVSAPLSTLVNWEREFEFWAPDMYVVTYAGDKESRATIRNFDF-SFDEDAFKSGLKAYK 368

Query: 861  -KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK S  KF+VLLT+YE++  DS+ L+ + W +LVVDE HRLKN+ SK F  L+ ++  +
Sbjct: 369  LKKDSPVKFHVLLTSYELVSIDSASLQSIDWAMLVVDEAHRLKNNQSKFFRTLSDYNIGY 428

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E++NLL FL P  F + ++F  +F+++    ++++L  ++ PHMLR
Sbjct: 429  KLLLTGTPLQNNLEELWNLLFFLDPVEFNNKNNFLTEFDNVAKEDQIKKLHDILGPHMLR 488

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D ++ IP K+E +V VELS +Q +YY+ +LT+N++ L    KG  Q S+LN++M+L
Sbjct: 489  RLKADVLKGIPSKSELIVRVELSPMQKKYYKWILTRNFEALNT--KGAQQVSLLNVMMEL 546

Query: 1040 RKVCNHPYLIP------------GTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEG 1087
            +K CNHPYL              G EP+S +         +AS KL LL  MLK L ++G
Sbjct: 547  KKCCNHPYLFHAAALEAKRTQSGGYEPNSLT---------EASGKLMLLVKMLKKLREQG 597

Query: 1088 HRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLL 1146
            HRVLIFSQMT++LD+LED+L  E     YER+DGSV+   RQ AI RFN   S+ F FLL
Sbjct: 598  HRVLIFSQMTRMLDLLEDFL--EGHGYKYERIDGSVNGAARQEAIDRFNAPTSQAFCFLL 655

Query: 1147 STRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERI 1206
            STR+ GLGINLATADTV IYDSD+NPH DIQA +RAHRIGQ+ ++++YR V R+SVEERI
Sbjct: 656  STRAGGLGINLATADTVFIYDSDWNPHNDIQAFSRAHRIGQNNKVMIYRFVTRSSVEERI 715

Query: 1207 LQLAKKKLMLDQLFV------NKSG--SQKEVEDILRWGTEELFNDSPGINGK 1251
             Q+AKKK+ML  L V      NK+   S+ E++DIL++GT ELF D    +G+
Sbjct: 716  TQVAKKKMMLTHLVVRPGLGSNKATIMSKSELDDILKFGTSELFKDDDTKDGE 768



 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 25/42 (59%), Positives = 32/42 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG LLCCD CP  YHL+CL PP+ R+P G+W+CP+C
Sbjct: 14  CRVCKDGGQLLCCDKCPMAYHLKCLIPPMMRVPTGEWKCPRC 55


>gi|328716042|ref|XP_003245819.1| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
            [Acyrthosiphon pisum]
          Length = 2002

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 296/705 (41%), Positives = 408/705 (57%), Gaps = 85/705 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGT-------TVINICDERWK--- 662
            E+ VKW  +S     W+ E Q++V     + +Y  KY           ++  D RWK   
Sbjct: 523  EYFVKWQDQSYWKCDWVSEVQMEVFHPITIRSYMRKYDMDEPPKLEEPLDELDNRWKRLR 582

Query: 663  ------------------QPQ-----RVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE 699
                              +P+     R+++ +  +D      VKW  LPY   TWE  + 
Sbjct: 583  EVGGDQAALEEKFYRYGVKPEWLLVHRILNHKHLRDARMMYLVKWRDLPYSLATWEH-EN 641

Query: 700  PALEKYSHLTDLFVQFE----------------RQTLKKDASEDELPRGKGDCQQSEIVA 743
            P         D + +                    + K    ++E P+        + V 
Sbjct: 642  PEYTDLKSFIDYYWELRASCDTSKKTKKVKGKKGSSKKDSVDDEETPKATMGLTCRKFVG 701

Query: 744  LTEQP-EELK-------------GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTV 789
              ++P  +LK             G  L P+QLE LNWLR  W +  + ILADEMGLGKT+
Sbjct: 702  APDKPVSDLKKKYEKQPDYVTDTGMELHPYQLEGLNWLRYSWGQGIDTILADEMGLGKTI 761

Query: 790  SACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQY 849
                F+ SLY E   K P LV VPLST+ NW  EF  WAP+  VV Y G   +R  IR+ 
Sbjct: 762  QTITFLYSLYKEGHCKGPFLVSVPLSTLINWEREFETWAPDFYVVSYVGDKDSRVTIREN 821

Query: 850  EWHASDPDN---LNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGS 906
            E+   D  +    NK     KF+VLLT+YE+I  D+  L  + W VLVVDE HRLK++ S
Sbjct: 822  EFSFDDTRSGVRCNKIKGIVKFHVLLTSYELISIDAPLLGSIEWAVLVVDEAHRLKSNQS 881

Query: 907  KLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKV 966
            K F LL  ++ ++++LLTGTPLQNN+ E+++LLNFL P  F  L+ F+ +F D++  ++V
Sbjct: 882  KFFRLLAGYNIRNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTVFQNEFADISKEEQV 941

Query: 967  EELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKG 1026
            + L +++ PHMLRRLK D ++N+P K+E +V VELS +Q +YY+ +LT+N++ L   G G
Sbjct: 942  KRLHEMLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPRGGG 1001

Query: 1027 VAQQSMLNIVMQLRKVCNHPYLIPGTEPDS-----GSVEFLHEMRIKASAKLTLLHSMLK 1081
              Q S+LNI+M L+K CNHPYL P    ++     GS E     R  A+ KL LL  ML+
Sbjct: 1002 -QQVSLLNIMMDLKKCCNHPYLFPAAAQEAPTAINGSYEIGGLTR--AAGKLVLLSKMLR 1058

Query: 1082 VLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS- 1140
            +L+   HRVLIFSQMTK+LDILEDYL  E G K YER+DGS++   RQ AI RFN   + 
Sbjct: 1059 ILHDTNHRVLIFSQMTKMLDILEDYLEGE-GYK-YERIDGSITGNQRQEAIDRFNAPGAQ 1116

Query: 1141 RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRA 1200
            +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V R 
Sbjct: 1117 QFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRN 1176

Query: 1201 SVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGT 1238
            SVEER+ Q+AK+K+ML  L V         + +++E++DILR+GT
Sbjct: 1177 SVEERVTQVAKRKMMLTHLVVRPGMGGKQTNFTKQELDDILRFGT 1221



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 32/45 (71%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQK 122
           C +C  GG LLCCDSCP  YH  CL PP+  +P+G W+CP+C+ K
Sbjct: 435 CRVCKDGGELLCCDSCPAAYHTFCLSPPITDVPDGDWKCPRCSAK 479



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CPR YHL CLDP L+  P GKW CP C
Sbjct: 377 CEVCQQGGEIILCDTCPRAYHLVCLDPELEDTPEGKWSCPHC 418


>gi|449018707|dbj|BAM82109.1| chromodomain helicase DNA binding protein CHD [Cyanidioschyzon
            merolae strain 10D]
          Length = 2014

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 307/763 (40%), Positives = 439/763 (57%), Gaps = 79/763 (10%)

Query: 570  HITCESTDKDVDVGKKTSGSVAKRVQEPAVTESAQVKGK---AVSYEFLVKWVGKSNIHN 626
            H+T E    +++     +  V+   +E +  E +  +G+    +  E+L+K+ G S IH 
Sbjct: 160  HMTLEEA-AEMNSSLSPASKVSAGAEERSPAEGSGDRGRLRTPMVEEYLIKFRGLSYIHC 218

Query: 627  SWIPESQL-----------KVLAKRKLEN-YKAKYGT-----------TVINICDERWKQ 663
             W+ E  +           + L+K + E  Y+   G                   E +  
Sbjct: 219  QWVREDFILAQPSGKQRLQRFLSKEQQEAAYRGVRGVLGSASDAEDHDEEDEAIPEDFVT 278

Query: 664  PQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLT--DLFVQ--FERQT 719
              R+I+     DGTR+  VKW  L YDECTWE         Y H    DL ++  +ER T
Sbjct: 279  VDRIIAEHVGPDGTRQFLVKWCSLGYDECTWE---------YEHEVQDDLKIKEFYERNT 329

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            L  ++     PR       +  V L+  P    GG L  +QLE LNWL  CW K +  IL
Sbjct: 330  LPPESERKRPPR----PNPASFVRLS-NPSFKNGGELREYQLEGLNWLVHCWFKRQGSIL 384

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ A +F+  LY E   + P LV+ PLST+ +W  EF  W  ++N + +HG 
Sbjct: 385  ADEMGLGKTIQAVSFLDYLYREQHLRGPFLVVAPLSTLGHWKREFETWT-HMNAIVFHGN 443

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             +AR +I QYEW  +    ++ ++  +K++VL+TTYE+IL +++ LRG+PW V+VVDE H
Sbjct: 444  VRARDVILQYEWTYA---GMSVRSGLFKWHVLITTYEIILQEANRLRGIPWAVIVVDEAH 500

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN  SKLF  L  F  +HRVLLTGTPLQNN  E+++LL+FL+PA FP+   F++ + D
Sbjct: 501  RLKNRQSKLFDELLGFRSEHRVLLTGTPLQNNSLELFSLLHFLEPAKFPNEKEFQQAYGD 560

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            +   + VE LK L+ P++LRR+K+D  + IPPK E ++ VEL+ IQ ++YRA+  +N+  
Sbjct: 561  IRDAEAVENLKALLRPYLLRRMKEDVEKAIPPKEETLISVELTRIQKQWYRALYEQNFAF 620

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP-DSGSVEFLHE---MR--IKASAKL 1073
            L   GK     ++ NIVM+LRK CNHPYLI G E  ++ S+  L E   MR  ++AS KL
Sbjct: 621  LEQGGKRNNVGNLRNIVMELRKCCNHPYLIRGVEEIETQSLAALGEDALMRHLVEASGKL 680

Query: 1074 TLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAIT 1133
             L+  +L VL ++GHRVLIFSQM ++LDILEDYL+   G K +ER+DG V   DRQ +I 
Sbjct: 681  VLVDKLLPVLREKGHRVLIFSQMIRVLDILEDYLHWR-GYK-FERLDGRVRGNDRQQSID 738

Query: 1134 RFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            RF +D   FVFLL TR+ G GINL  ADTVII+DSD+NP  D+QA  R HRIGQ + + V
Sbjct: 739  RFQKDPENFVFLLCTRAGGQGINLTVADTVIIFDSDWNPQNDVQAQARCHRIGQERDVKV 798

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQ-----LFVNKSGS--------QKEVEDILRWGTEE 1240
            YRL+ R + EE +   A KKL LDQ     + V++ GS        + ++  +LR G  +
Sbjct: 799  YRLITRGTYEEEMFDRASKKLGLDQAVLQNMGVDQGGSGNMLSTMGRDDINRLLRRGAYD 858

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRK--RGGGLGDV 1281
            +FN+       D    +    E + ++  +  K  + GG GDV
Sbjct: 859  VFNE-------DDSAADAFTAENIENIMARRTKTIKTGGAGDV 894


>gi|17562600|ref|NP_504523.1| Protein LET-418 [Caenorhabditis elegans]
 gi|403399446|sp|G5EBZ4.1|LE418_CAEEL RecName: Full=Protein let-418; AltName: Full=Lethal protein 418
 gi|11095333|gb|AAG29838.1| LET-418 [Caenorhabditis elegans]
 gi|351020697|emb|CCD62685.1| Protein LET-418 [Caenorhabditis elegans]
          Length = 1829

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 312/790 (39%), Positives = 439/790 (55%), Gaps = 101/790 (12%)

Query: 613  EFLVKWVGKSNIHNSWI-------------------------PESQLKVLAKRKLEN--Y 645
            EF VKW   S    SW+                         PE +  V ++   +N  Y
Sbjct: 414  EFFVKWKYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFEESVTSRHHSDNDPY 473

Query: 646  KAKYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD------E 699
            K +       I  E W Q  R+I+ +S     ++  VKW  L YD+ TWE+ D      E
Sbjct: 474  KLRERFYQYGIKPE-WMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYE 532

Query: 700  PALEKY-----SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVAL------TEQP 748
             A+ KY     S L +   +  ++ + K      LP  + + ++ +   +        QP
Sbjct: 533  EAIIKYWQHRESKLNEDIPKNVQKMIAKHREAKGLPPKEDEKKKKKREKIDIRKKYEVQP 592

Query: 749  EELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            + +   GG L P+QLE LNWLR CW    + ILADEMGLGKTV +  F+ SL  E   K 
Sbjct: 593  DYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKG 652

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHA------SDPDNLN 860
            P L+  PLST+ NW  E   W P+  VV Y G   AR ++R++E+        S P    
Sbjct: 653  PFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASK 712

Query: 861  KKTS-SYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KT+ + KF+VLLT+YE I  D + L  + W  LVVDE HRLKN+ S  F  LN ++  +
Sbjct: 713  MKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHY 772

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            RVLLTGTPLQNN+ E+++LLNFL    F  L +F  +FN+++   ++E+L  L+ PHMLR
Sbjct: 773  RVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLR 832

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D +  +P K+E +V VELS++Q ++Y+ +LT+N+  L N+  G  Q S++N++M+L
Sbjct: 833  RLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDAL-NVKNGGTQMSLMNVLMEL 891

Query: 1040 RKVCNHPYLIPGTE---PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL    E   P   +  +     IK S K  LL  ML+ L   GHRVLIFSQM
Sbjct: 892  KKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQM 951

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGI 1155
            T++LDI+ED    E+    YER+DGS+    RQ AI R+N   + +F+FLLSTR+ GLGI
Sbjct: 952  TRMLDIMEDL--CEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGI 1009

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHR+GQ  ++++YR V + SVEE+I  +AKKK++
Sbjct: 1010 NLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKML 1069

Query: 1216 LDQLFV--------NKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDL 1267
            L+ L V         K+ S+ E++D+LRWGTEELF++       D  E   S        
Sbjct: 1070 LNHLVVRAGLGGKEGKTMSKTELDDVLRWGTEELFSED-----LDAAEGEGS-------- 1116

Query: 1268 EQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQ---SGSTDLAEGDLEND 1324
                 K+G              + +IVWD+ A+  LLDRSN +   +G     + + +N+
Sbjct: 1117 ----EKKGA------------AAQEIVWDDAAVDALLDRSNKEETPAGEDGEEKAEWQNE 1160

Query: 1325 MLGSVKATEW 1334
             L S K   +
Sbjct: 1161 YLSSFKVASY 1170



 Score = 57.0 bits (136), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 8/68 (11%)

Query: 69  KGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGK-WQCPKCTQKNDQLK 127
           K ND +   C IC    NLL CDSC  ++H  C+DPPL  +P  + W CP+C    + +K
Sbjct: 314 KQNDEF---CKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRC----ETVK 366

Query: 128 PISNLDSI 135
           P   ++ I
Sbjct: 367 PEHKIEKI 374



 Score = 54.7 bits (130), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 24/44 (54%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQ 121
           C  C   G LL CD+CPR YH  C+D  ++  P G W C  C +
Sbjct: 259 CEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIE 302


>gi|341891282|gb|EGT47217.1| CBN-LET-418 protein [Caenorhabditis brenneri]
          Length = 1835

 Score =  514 bits (1325), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 296/722 (40%), Positives = 420/722 (58%), Gaps = 83/722 (11%)

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTL 720
            W Q  R+I+ +S     ++  VKW  L YD+ TWE+ D+  +  Y      + Q   + L
Sbjct: 488  WMQIHRIINHQSYAKSQQDYLVKWKELTYDQATWER-DDAKIANYQEAIIKYWQHRERML 546

Query: 721  KKDASEDELPRG--KGDCQQSEIVALTEQPEELK------------------------GG 754
                  D++P+   K   +  E   L  + EE +                        GG
Sbjct: 547  N-----DDIPKNVQKMIAKHREAKGLPPKEEESRRPKKREKVDIRKKYEVQPDYVSETGG 601

Query: 755  ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPL 814
             L P+QLE +NWLR CW    + ILADEMGLGKTV +  F+ +L  E   K P L+  PL
Sbjct: 602  TLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHCKGPFLIAAPL 661

Query: 815  STMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHA------SDPDNLNKKTS-SYK 867
            ST+ NW  E   W P+  VV Y G   +R ++R++E+        S P     KT+ + K
Sbjct: 662  STIINWEREAEQWCPDFYVVTYVGDRDSRVVLREHEFSFVEGAVRSGPKAGKMKTTENMK 721

Query: 868  FNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTP 927
            F+VLLT+YE I  D + L  + W  LVVDE HRLKN+ S  F  LN ++  +RVLLTGTP
Sbjct: 722  FHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTP 781

Query: 928  LQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQ 987
            LQNN+ E+++LLNFL    F  L +F  +F++++   ++E+L  L+ PHMLRRLK D + 
Sbjct: 782  LQNNLEELFHLLNFLSAERFNQLEAFTAEFSEISKEDQIEKLHNLLGPHMLRRLKADVLT 841

Query: 988  NIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPY 1047
             +P K+E +V VELS +Q ++Y+ +LT+N+  L N+  G  Q S++N++M+L+K CNHPY
Sbjct: 842  GMPSKSELIVRVELSPMQKKWYKNILTRNFDAL-NVKNGGTQMSLMNVLMELKKCCNHPY 900

Query: 1048 LIPGTE---PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILE 1104
            L        P   +  +     IK + K  LL  ML+ L ++GHRVLIFSQMT ++DI+E
Sbjct: 901  LFAKASLEAPKEKNGMYEGTALIKNAGKFVLLQKMLRKLKEQGHRVLIFSQMTMMMDIME 960

Query: 1105 DYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTV 1163
            D+ ++E G K YER+DGS++   RQ AI R+N   + +FVFLLSTR+ GLGINLATADTV
Sbjct: 961  DFCDVE-GYK-YERIDGSITGQMRQDAIDRYNAPGAQQFVFLLSTRAGGLGINLATADTV 1018

Query: 1164 IIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-- 1221
            IIYDSD+NPH DIQA +RAHR+GQ  ++++YR V + SVEERI  +AKKK++L+ L V  
Sbjct: 1019 IIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLNHLVVRA 1078

Query: 1222 ------NKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRG 1275
                   KS S+ E++D+LRWGTEELF +            +  + E+  + E      G
Sbjct: 1079 GLGGKEGKSMSKSELDDVLRWGTEELFKE------------DDCVAESTAEGE------G 1120

Query: 1276 GGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGST-DLAEG--DLENDMLGSVKAT 1332
            G      + K T  + +IVWD+ A+  LLDR   + G+  D  EG  D +N+ L S K  
Sbjct: 1121 G------EKKST--AHEIVWDDAAVDFLLDRDRKEEGAPEDGGEGKADWQNEYLSSFKVA 1172

Query: 1333 EW 1334
             +
Sbjct: 1173 SY 1174



 Score = 61.2 bits (147), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 28/49 (57%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQL 126
           C  C  GG L+ CD+CPR YH  C+D  ++  P G W CP C +   ++
Sbjct: 258 CEECKSGGELILCDTCPRAYHTVCIDANMEEAPEGDWSCPHCMEHGPEI 306



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 5/53 (9%)

Query: 69  KGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIP--NGKWQCPKC 119
           K ND +   C IC    NLL CD+C  ++H  C+DPPL  +P  +  W CP+C
Sbjct: 313 KQNDDF---CKICKETENLLLCDNCTCSFHAYCMDPPLLELPPQDESWACPRC 362


>gi|194874037|ref|XP_001973329.1| GG16034 [Drosophila erecta]
 gi|190655112|gb|EDV52355.1| GG16034 [Drosophila erecta]
          Length = 869

 Score =  514 bits (1324), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 291/667 (43%), Positives = 400/667 (59%), Gaps = 46/667 (6%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGT----TVINICDER-------- 660
            E+ +KW  KS  H  WIPE Q+ V     + N++ K       ++    D++        
Sbjct: 84   EYFIKWYDKSYWHCEWIPEGQMLVHHATIVANFQRKNDMEEPPSLEEPFDDKERDLHERF 143

Query: 661  --------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLF 712
                    W   QRVI+ R   +G     VKW  L Y + +WE ++  A+     L    
Sbjct: 144  YRYGIKPGWLLVQRVINHRKEPNGRTTYLVKWRELTYTDSSWE-IENDAIPG---LKQAI 199

Query: 713  VQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG--ALFPHQLEALNWLRKC 770
              +E+    K       P    D  +       +QP  LKG    L P Q+E ++WLR  
Sbjct: 200  AHYEKLRSGKKGRPKNRPGPTTDLNKK----YEDQPVFLKGADLKLHPFQMEGISWLRYS 255

Query: 771  WHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPN 830
            W +S   ILADEMGLGKT+    F+ SL+ E   + P L+ VPLST+ NW  E  LWAP 
Sbjct: 256  WGQSIRTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLICVPLSTLTNWERELELWAPE 315

Query: 831  LNVVEYHGCAKARAIIRQYEWHASD--PDNLNKKTSSYKFNVLLTTYEMILADSSHLRGV 888
               + Y G   +RA+IR  E    +     + +  + YKFNV+LT+YE I  D+  L  +
Sbjct: 316  FYCITYGGSKTSRAVIRNNELSFDEITTKTMRENRAQYKFNVMLTSYEFIYIDAPLLGII 375

Query: 889  PWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 948
             W VLVVDE HRLK++ SK F  L+ +   +++LLTGTPLQNN+ E+++LLNFL    F 
Sbjct: 376  DWAVLVVDEAHRLKSNHSKFFRTLSKYRIAYKLLLTGTPLQNNLEELFHLLNFLSSDKFN 435

Query: 949  SLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEY 1008
             L +F+ +F D++  ++V+ L +++ PHMLRRLK D ++N+P K+E +V VELSS+Q ++
Sbjct: 436  DLHTFQAEFADVSKEEQVKRLHEILGPHMLRRLKADVLKNMPSKSEFIVRVELSSMQKKF 495

Query: 1009 YRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSG-SVEFLHEMR- 1066
            Y+ +LTKN++ L+  G G    S+LNI+M+LRK CNHPYL P    D+  S   L+E+  
Sbjct: 496  YKFILTKNFKALKQKGGG-GVCSLLNIMMELRKCCNHPYLFPSAAEDASISPSGLYEINS 554

Query: 1067 -IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             IKAS KL LL  MLK L  + HRVLIFSQMTK+L+ILE++L  E     YER+DG +  
Sbjct: 555  LIKASGKLELLSKMLKQLKADNHRVLIFSQMTKMLNILENFLEEE--GYQYERIDGLIKG 612

Query: 1126 GDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQ AI RFN  K+ +FVFLLSTR+ GLGINLATADTVII+DSD+NPH D+QA +RAHR
Sbjct: 613  DLRQRAIDRFNAPKAEQFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHR 672

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVE-------DILRWG 1237
            +GQ+K++++YR V   SVEER++Q+AK K+ML  L V      KEV        DILR+G
Sbjct: 673  MGQTKKVMIYRFVTHNSVEERMMQVAKHKMMLTHLVVRPGMGGKEVNFTKDELADILRFG 732

Query: 1238 TEELFND 1244
            TE+LF D
Sbjct: 733  TEDLFKD 739



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/42 (64%), Positives = 30/42 (71%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG+LLCCDSCP  YH  CL PPLK IP G W CP+C
Sbjct: 11  CRVCRDGGDLLCCDSCPSVYHRTCLTPPLKSIPKGDWICPRC 52


>gi|341900249|gb|EGT56184.1| hypothetical protein CAEBREN_32223 [Caenorhabditis brenneri]
          Length = 1816

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 297/722 (41%), Positives = 420/722 (58%), Gaps = 83/722 (11%)

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTL 720
            W Q  R+I+ +S     ++  VKW  L YD+ TWE+ D+  +  Y      + Q   + L
Sbjct: 504  WMQIHRIINHQSYAKSQQDYLVKWKELTYDQATWER-DDAKIANYQEAIIKYWQHRERML 562

Query: 721  KKDASEDELPRG--KGDCQQSEIVALTEQPEELK------------------------GG 754
                  D++P+   K   +  E   L  + EE +                        GG
Sbjct: 563  N-----DDIPKNVQKMIAKHREAKGLPPKEEESRRPKKREKVDIRKKYEVQPDYVSETGG 617

Query: 755  ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPL 814
             L P+QLE +NWLR CW    + ILADEMGLGKTV +  F+ +L  E   K P L+  PL
Sbjct: 618  TLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHCKGPFLIAAPL 677

Query: 815  STMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHA------SDPDNLNKKTS-SYK 867
            ST+ NW  E   W P+  VV Y G   +R ++R++E+        S P     KT+ + K
Sbjct: 678  STIINWEREAEQWCPDFYVVTYVGDRDSRVVLREHEFSFVEGAVRSGPKAGKMKTTENMK 737

Query: 868  FNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTP 927
            F+VLLT+YE I  D + L  + W  LVVDE HRLKN+ S  F  LN ++  +RVLLTGTP
Sbjct: 738  FHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTP 797

Query: 928  LQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQ 987
            LQNN+ E+++LLNFL    F  L +F  +F++++   ++E+L  L+ PHMLRRLK D + 
Sbjct: 798  LQNNLEELFHLLNFLSAERFNQLEAFTAEFSEISKEDQIEKLHNLLGPHMLRRLKADVLT 857

Query: 988  NIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPY 1047
             +P K+E +V VELS +Q ++Y+ +LT+N+  L N+  G  Q S++N++M+L+K CNHPY
Sbjct: 858  GMPSKSELIVRVELSPMQKKWYKNILTRNFDAL-NVKNGGTQMSLMNVLMELKKCCNHPY 916

Query: 1048 LIPGTE---PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILE 1104
            L        P   +  +     IK + K  LL  ML+ L ++GHRVLIFSQMT +LDI+E
Sbjct: 917  LFAKASLEAPKEKNGMYEGTALIKNAGKFVLLQKMLRKLKEQGHRVLIFSQMTMMLDIME 976

Query: 1105 DYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTV 1163
            D+ ++E G K YER+DGS++   RQ AI R+N   + +FVFLLSTR+ GLGINLATADTV
Sbjct: 977  DFCDVE-GYK-YERIDGSITGQMRQDAIDRYNAPGAQQFVFLLSTRAGGLGINLATADTV 1034

Query: 1164 IIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-- 1221
            IIYDSD+NPH DIQA +RAHR+GQ  ++++YR V + SVEERI  +AKKK++L+ L V  
Sbjct: 1035 IIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLNHLVVRA 1094

Query: 1222 ------NKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRG 1275
                   KS S+ E++D+LRWGTEELF +            +  + E+  + E      G
Sbjct: 1095 GLGGKEGKSMSKSELDDVLRWGTEELFKE------------DDCVAESTAEGE------G 1136

Query: 1276 GGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGST-DLAEG--DLENDMLGSVKAT 1332
            G      + K T  + +IVWD+ A+  LLDR   + G+  D  EG  D +N+ L S K  
Sbjct: 1137 G------EKKST--AHEIVWDDAAVDFLLDRDRKEEGAPEDGGEGKADWQNEYLSSFKVA 1188

Query: 1333 EW 1334
             +
Sbjct: 1189 SY 1190



 Score = 60.8 bits (146), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 28/49 (57%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQL 126
           C  C  GG L+ CD+CPR YH  C+D  ++  P G W CP C +   ++
Sbjct: 258 CEECKSGGELILCDTCPRAYHTVCIDANMEEAPEGDWSCPHCMEHGPEI 306



 Score = 54.7 bits (130), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 5/53 (9%)

Query: 69  KGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIP--NGKWQCPKC 119
           K ND +   C IC    NLL CD+C  ++H  C+DPPL  +P  +  W CP+C
Sbjct: 313 KQNDDF---CKICKETENLLLCDNCTCSFHAYCMDPPLLELPPQDESWACPRC 362


>gi|395538667|ref|XP_003771296.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 4 [Sarcophilus harrisii]
          Length = 2011

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 326/786 (41%), Positives = 441/786 (56%), Gaps = 117/786 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK----------YGT----------- 651
            +F VKW G S  H SW+ E QL++  +    NY+ K          +G            
Sbjct: 615  QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGEEEKSRKRKNK 674

Query: 652  -TVINICDER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
                   +ER         W    R+++    K G     +KW  LPYD+ +WE  D   
Sbjct: 675  DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESED-VE 733

Query: 702  LEKYSHLTDLFVQF---ERQTLKKDASEDELPRGKGDCQQSE----------IVALTEQP 748
            ++ Y    DLF Q     R+ ++ +         K   ++ E           V    QP
Sbjct: 734  VQDY----DLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQP 789

Query: 749  EEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
            E L   GG L P+Q+E LNWLR  W +  + ILADEMGLGKTV    F+ SLY E  +K 
Sbjct: 790  EYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKG 849

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEW-------HASDPDNL 859
            P LV  PLST+ NW  EF +WAP++ VV Y G   + AIIR+ E+       H     + 
Sbjct: 850  PFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSHAIIREKEFSFEDNAIHGGKKASR 909

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRL       F +LN +S QH
Sbjct: 910  MKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRL-------FRVLNGYSLQH 962

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PHMLR
Sbjct: 963  KLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLR 1022

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D  +N+P KTE    + LS +Q +YY+ +LT+N++ L   G G  Q S+LN+VM L
Sbjct: 1023 RLKADVFKNMPSKTE----LXLSPMQKKYYKYILTRNFEALNARGGG-NQVSLLNVVMDL 1077

Query: 1040 RKVCNHPYLIPGTE---PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +     I+AS KL LL  MLK L + GHRVLIFSQM
Sbjct: 1078 KKCCNHPYLFPVAAMEAPKMPNGMYDGSALIQASGKLLLLQKMLKKLKEGGHRVLIFSQM 1137

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGI 1155
            TK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   ++ F FLLSTR+ GLGI
Sbjct: 1138 TKMLDLLEDFLEHE-GYK-YERIDGEITGNTRQEAIDRFNTPGAQQFCFLLSTRAGGLGI 1195

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            +LATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V  ASVEE I Q+AKKK+M
Sbjct: 1196 SLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTHASVEEHITQVAKKKMM 1255

Query: 1216 LDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLE 1268
            L  L V     +K+G  S++E++DIL++GTEELF D     G D                
Sbjct: 1256 LTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGD---------------- 1299

Query: 1269 QKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGS 1328
                           +K  E S+ I +D+ AI RLLDR+  ++  T+L      N+ L S
Sbjct: 1300 ---------------NKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQG---MNEYLSS 1341

Query: 1329 VKATEW 1334
             K  ++
Sbjct: 1342 FKVAQY 1347



 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 97/202 (48%), Positives = 134/202 (66%), Gaps = 7/202 (3%)

Query: 804 AKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD-------P 856
           +K P LV  PLST+ NW  EF +WAP++ VV Y G   +RAIIR+ E+   D        
Sbjct: 134 SKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKK 193

Query: 857 DNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFS 916
            +  KK +S KF+VLLT+YE+I  D + L  + W  L+VDE HRLKN+ SK F +LN +S
Sbjct: 194 ASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYS 253

Query: 917 FQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPH 976
            QH++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+    ++++L  ++ PH
Sbjct: 254 LQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPH 313

Query: 977 MLRRLKKDAMQNIPPKTERMVP 998
           MLRRLK D  +N+P KTE + P
Sbjct: 314 MLRRLKADVFKNMPSKTELIEP 335



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/146 (58%), Positives = 108/146 (73%), Gaps = 8/146 (5%)

Query: 1095 QMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGL 1153
            QMTK+LD+LED+L  E G K YER+DG ++   RQ AI RFN   ++ F FLLSTR+ GL
Sbjct: 342  QMTKMLDLLEDFLEHE-GYK-YERIDGEITGNTRQEAIDRFNTPGAQQFCFLLSTRAGGL 399

Query: 1154 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKK 1213
            GI+LATADTVIIYDSD+NPH DIQA +RAHRIGQ+K++++YR V  ASVEE I Q+AKKK
Sbjct: 400  GISLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTHASVEEHITQVAKKK 459

Query: 1214 LMLDQLFV-----NKSGSQKEVEDIL 1234
            +ML  L V     +K+GS      +L
Sbjct: 460  MMLTHLVVRPGLGSKTGSMSXXXXLL 485



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 525 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 567


>gi|332029993|gb|EGI69818.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
            [Acromyrmex echinatior]
          Length = 1852

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 312/736 (42%), Positives = 414/736 (56%), Gaps = 111/736 (15%)

Query: 595  QEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGT--- 651
            +EP+ +++A  + K    EF VKW   S  H  WI E QL V       NY  KY     
Sbjct: 400  EEPSTSKAAPKQRKM--REFFVKWADMSYWHCDWITELQLDVFHPLMYRNYYRKYDMDEP 457

Query: 652  ----TVINICDER------------------------------WKQPQRVISLRSSKDGT 677
                  ++  D R                              W    R I+ R  +DG 
Sbjct: 458  PKLEEPLDESDSRVKRLKEQDGATNRDEYNLEERFYRYGVRPEWLGVHRGINHRLQRDGR 517

Query: 678  REAFVKWTGLPYDECTWEKLDE------PALEKYSHL----------------------- 708
                VKW  L YD+ TWE   E       A+E Y  L                       
Sbjct: 518  ATYLVKWRELGYDQATWENEHEDIPGLKQAIEYYLDLRAANCCDVSSSRKGKKGKGKKSK 577

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNW 766
            T   +  E +T K+     + P    D ++        QPE L   G  L  +QLE LNW
Sbjct: 578  TRELIDDEERTPKRYTPPPDKP--TTDLKKK----YERQPEYLDQTGMQLHHYQLEGLNW 631

Query: 767  LRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFAL 826
            LR  W +  + ILADEMGLGKT+    F+ SLY E   K P LV VPLST+ NW  EF  
Sbjct: 632  LRYSWGQGIDTILADEMGLGKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFET 691

Query: 827  WAPNLNVVEYHGCAKARAIIRQ----YEWHASDPDNLNK-KTSSYKFNVLLTTYEMILAD 881
            WAP+   V Y G   +R +IR+    +E  A      +K ++SS KFNVLLT+YE+I  D
Sbjct: 692  WAPDFYCVTYVGDKDSRIVIRENELSFEEGAVRSGRASKIRSSSIKFNVLLTSYELISID 751

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
            S+ L  + W VLVVDE HRLK++ SK F LL S++  +++LLTGTPLQNN+ E+++LLNF
Sbjct: 752  SACLGSIDWAVLVVDEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNF 811

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L    F  L++F+ +F D++  ++V++L +++ PHMLRRLK D ++N+P K+E +V VEL
Sbjct: 812  LCRDKFNDLAAFQNEFADISKEEQVKKLHEMLGPHMLRRLKADVLKNMPSKSEFIVRVEL 871

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE---PDSGS 1058
            S +Q +YY+ +LT+N++ L   G G  Q S+LNI+M L+K CNHPYL P      P   +
Sbjct: 872  SPMQKKYYKYILTRNFEALNPKGGG-QQVSLLNIMMDLKKCCNHPYLFPAASQEAPTGPN 930

Query: 1059 VEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
              +     IKA+ KL LL  MLK L  +GHRVLIFSQMTK+LDILEDYL  E G K YER
Sbjct: 931  GSYETSALIKAAGKLVLLSKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGE-GYK-YER 988

Query: 1119 VDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            +DG+                  +FVFLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA
Sbjct: 989  IDGA-----------------QQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQA 1031

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVE 1231
             +RAHRIGQ+ ++++YR V R SVEER+ Q+AK+K+ML  L V         + S++E++
Sbjct: 1032 FSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGANFSKQELD 1091

Query: 1232 DILRWGTEELFNDSPG 1247
            DILR+GTEELF +  G
Sbjct: 1092 DILRFGTEELFKEEEG 1107



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 28/42 (66%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CPR YHL CL+P ++  P GKW C  C
Sbjct: 338 CEVCQQGGEIILCDTCPRAYHLVCLEPEMEETPEGKWSCAHC 379


>gi|358339541|dbj|GAA47583.1| chromodomain-helicase-DNA-binding protein 4 [Clonorchis sinensis]
          Length = 1670

 Score =  511 bits (1317), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 325/809 (40%), Positives = 448/809 (55%), Gaps = 136/809 (16%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKY----------GTTVINICDER-- 660
            EF VK+V  S  H  W+ E QL V     L NY  K           G+T      E+  
Sbjct: 307  EFFVKYVDLSYWHCEWLSELQLDVHHPIMLRNYFKKCDMEEPPLPEDGSTYRGRAREKAA 366

Query: 661  -----------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD----- 698
                             W Q QR+I  R+ + G     VKW  L YDECTWE+ D     
Sbjct: 367  DPHNLEERFYKWGVRPEWLQIQRIIDHRTGRGGREWFLVKWRELSYDECTWEEPDGEVLD 426

Query: 699  -EPALEKYSHLTDLFVQFERQTLKKDASEDELPRGK-------------GDCQQSEIV-- 742
             + A+++Y  +  +F      ++  D +   +   K             GD  + E++  
Sbjct: 427  MDRAIQEYRTMRQVFQGNLCTSVAPDGTRTLVSTSKKHKPGRRSAKDILGDKLRPELLRK 486

Query: 743  -----ALTE-------QPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
                  LT+       QP+ L   GG L  +QLE +NWLR  +    + ILADEMGLGKT
Sbjct: 487  LPPDRCLTDLKKQYMTQPDYLDDTGGQLHEYQLEGVNWLRFSYGNKVDTILADEMGLGKT 546

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +   +F+ SLY E  ++ P LV  PLST+ NW  EF  WAP+L VV Y G   +R +IRQ
Sbjct: 547  IQTISFLYSLYKEGHSRGPFLVAAPLSTIINWEREFEFWAPDLYVVSYVGDKDSRTVIRQ 606

Query: 849  YEWH--------ASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            +E+          S    L   TS  +F+VLLT+YE+I  D + L  + WEVLVVDE HR
Sbjct: 607  HEFSFDEGAVRGGSKAMRLRSGTS-VRFHVLLTSYELISIDQALLGSIDWEVLVVDEAHR 665

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN+ SK F +L S+   +++LLTGTPLQNN+ E+++LL+F+ P  F  +  F ++F D+
Sbjct: 666  LKNNQSKFFRILASYKIAYKLLLTGTPLQNNLEELFHLLHFMTPEKFHDMQGFLDEFADI 725

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
            +  ++V++L  ++  H+LRRLK D +QN+P K E +V VELS +Q  +Y+ +LT+N++ L
Sbjct: 726  SKEEQVKKLHDMLGQHLLRRLKADVLQNMPSKGEFIVRVELSPMQKRFYKFILTRNFEAL 785

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS-----GSVEFLHEMRIKASAKLTL 1075
             +   G +  S++NI+M L+K CNHPYL P    ++     G+ E  + +R KAS KL L
Sbjct: 786  -SCRSGGSNVSLINIMMDLKKCCNHPYLFPSASEEAPRLPNGAYEG-NALR-KASGKLEL 842

Query: 1076 LHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRF 1135
            +  ML+ LY   HRVLIFSQMTK+LD+LED+L  E G K +ER+DG ++   RQ AI R+
Sbjct: 843  MSKMLRNLYDTKHRVLIFSQMTKVLDLLEDFLESE-GYK-FERIDGGITGQQRQDAIDRY 900

Query: 1136 NQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVY 1194
            N  D   F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++Y
Sbjct: 901  NAPDSPSFAFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIY 960

Query: 1195 RLVVRASVEERILQLAKKKLMLDQLFVNKS--------GSQKEVEDILRWGTEELFNDSP 1246
            R V R +VEER+ Q+AKKK+ML  L V            S+KE++DIL++GTE+LF +  
Sbjct: 961  RFVTRGTVEERVTQVAKKKMMLTHLVVRPGLGGKGSCQMSKKELDDILKFGTEDLFKEG- 1019

Query: 1247 GINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDR 1306
                                             +   + C      IV+D+ AI RLLDR
Sbjct: 1020 -------------------------------EEEKEDEHC------IVYDDAAIQRLLDR 1042

Query: 1307 SNLQSGSTDLAEGDLE-NDMLGSVKATEW 1334
            S  Q G   L E  LE ND L S K   +
Sbjct: 1043 S--QQG---LEEKALEMNDYLTSFKVAHY 1066



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 30/42 (71%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C  C  GG+L+CC++CP +YHL CL PPL  IP G W CP+C
Sbjct: 137 CTECHDGGDLICCENCPVSYHLDCLIPPLTNIPEGVWLCPRC 178



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CPR YHL CLDP L+  P G W CP C
Sbjct: 53  CEVCQQGGEIMLCDTCPRAYHLVCLDPELEEAPEGSWSCPHC 94


>gi|339242107|ref|XP_003376979.1| domain protein, SNF2 family [Trichinella spiralis]
 gi|316974280|gb|EFV57776.1| domain protein, SNF2 family [Trichinella spiralis]
          Length = 2137

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 313/815 (38%), Positives = 430/815 (52%), Gaps = 145/815 (17%)

Query: 598  AVTESAQVKGKAVSY---EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVI 654
            A  E+A V  K V+    EF VKW   S  H SW+ E  L V     L  Y  K    + 
Sbjct: 494  AGGETAAVAKKNVNRRMREFYVKWKYLSYWHCSWVLELVLDVWFPHVLRMYFRKMDPEIP 553

Query: 655  NICDE----------------------------------RWKQPQRVISLRSSKDGTREA 680
               D+                                   W Q QRVI+ +  + G  + 
Sbjct: 554  PEVDDGSQEDLQTGNIEGKDREQDPHNLEERYYRYGIKPEWLQIQRVINHKVHRHGGVDY 613

Query: 681  FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPR--------- 731
             +KW  L Y++ +WE  DE  +  +      +     + + +   +  + R         
Sbjct: 614  LIKWRELSYEQASWES-DEFEIPNFYDAIQYYWDHRERMINEAPPKQVVKRLKTMAVAAS 672

Query: 732  ----------GKGDCQQSEIVA-----------LTEQPEELK--GGALFPHQLEALNWLR 768
                      G  + ++  + A           + +QP+ +   GG L  +QL  LN+LR
Sbjct: 673  NIAAAQAGTSGAPEKKKRRLTAPPQPSTDLKKKIEKQPDYITECGGNLHDYQLAGLNFLR 732

Query: 769  KCWHKSKNVILADEMGLGKTVSACAFISSLYCEFK---------------AKLPCLVLVP 813
              W  S + ILADEMGLGKT+    F+ SLY E +                K P L+  P
Sbjct: 733  YSWATSVDAILADEMGLGKTIQTIVFLYSLYKEVREKGIEQQLLNNPYGHCKGPFLISAP 792

Query: 814  LSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWH--------ASDPDNLNKKTSS 865
            LST+ NW  EF  WAP+  VV Y G   +RA+IR++E+            P  L +    
Sbjct: 793  LSTIINWEREFEFWAPDFYVVTYIGDKDSRAVIREHEFSFVEGAVKGGPKPGKL-RTGEG 851

Query: 866  YKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTG 925
             KF+ LLT+YE+I  D + L  + W +LVVDE HRLKN+ SK F  L  F    +VLLTG
Sbjct: 852  IKFHALLTSYELISIDHTTLGSIDWAMLVVDEAHRLKNNQSKFFRTLRDFKLNFKVLLTG 911

Query: 926  TPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDA 985
            TPLQNN+ E+++LLNFL P  F  +  F ++F D++  +++ +L  L+ PHMLRRLK D 
Sbjct: 912  TPLQNNLEELFHLLNFLSPERFCDMELFTQEFTDISKEEQIAKLHSLLGPHMLRRLKSDV 971

Query: 986  MQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNH 1045
            ++ +P K+E +V VELS+IQ +YY+ +LTKN+  L N   G +Q S+LNI+M L+K CNH
Sbjct: 972  LKGMPAKSELIVRVELSTIQKKYYKYVLTKNFDAL-NTRCGGSQVSLLNIMMDLKKCCNH 1030

Query: 1046 PYLIP---GTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDI 1102
            PYL P      P   +  F     +K+  KL LL  ML++L + GHRVLIFSQMTK+LD+
Sbjct: 1031 PYLFPIAASEAPKLPNGAFEGSALVKSCGKLILLQKMLRMLKEGGHRVLIFSQMTKMLDL 1090

Query: 1103 LEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATAD 1161
            +ED+L  E+    YER+DGSV+   RQ AI RFN  +  +FVFLLSTR+ GLGINLATAD
Sbjct: 1091 IEDFL--EYEGYKYERIDGSVTGSLRQDAIDRFNAPNAPQFVFLLSTRAGGLGINLATAD 1148

Query: 1162 TVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            TVIIYDSD+NPH DIQA +RAHRIGQ++++++YR V R SVEERI  +AKKK+ML  L V
Sbjct: 1149 TVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTRNSVEERITTVAKKKMMLTHLVV 1208

Query: 1222 -------NKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
                     S S++E++D+LRWGTEELF +     G D  EN                  
Sbjct: 1209 RAGIGNRGPSMSKQELDDVLRWGTEELFKE-----GDDEKENTDH--------------- 1248

Query: 1275 GGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNL 1309
                             +I+WD+ A+  LLDRS +
Sbjct: 1249 -----------------QIIWDDKAVGALLDRSQV 1266



 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 42/80 (52%)

Query: 49  PSAKRRLKNEINADRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKR 108
           P  +  L N+ +A  S        G    C +C  GG LLCCDSCP +YH  CL PPL  
Sbjct: 381 PHCENDLVNDNDAVTSKEAAPAKAGNMEFCRLCRDGGELLCCDSCPSSYHRYCLIPPLTT 440

Query: 109 IPNGKWQCPKCTQKNDQLKP 128
           IP G W CP+CT    + +P
Sbjct: 441 IPEGDWHCPRCTCVEPEHRP 460



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 11/70 (15%)

Query: 61  ADRSSTKKKGNDG-----------YYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRI 109
           A R+  KKK  DG           +   C +C  GG ++ CD+CPR YH+ CLDP ++  
Sbjct: 314 AKRAPPKKKTKDGDDEEEENYDTDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEEP 373

Query: 110 PNGKWQCPKC 119
           P GKW CP C
Sbjct: 374 PGGKWSCPHC 383


>gi|2645435|gb|AAB87384.1| CHD3 [Drosophila melanogaster]
          Length = 1518

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 287/667 (43%), Positives = 402/667 (60%), Gaps = 48/667 (7%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINI---------CDER--- 660
            E+ +KW G S  H  WIPE Q+ +     + +++ +      ++           ER   
Sbjct: 115  EYFIKWHGMSYWHCEWIPEGQMLLHHASMVASFQRRSDMEEPSLEELDDQDGNLHERFYR 174

Query: 661  ------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE--PALEKYSHLTDLF 712
                  W   QRVI+     +G     VKW  L Y++ +WE+  +  P L +   L    
Sbjct: 175  YGIKPEWLLVQRVINHSEEPNGGTMYLVKWRELSYNDSSWERESDSIPGLNQAIAL---- 230

Query: 713  VQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK--GGALFPHQLEALNWLRKC 770
              +++        + + P    D  +       +QP  LK  G  L P Q+E ++WLR  
Sbjct: 231  --YKKLRSSNKGRQRDRPAPTIDLNKK----YEDQPVFLKEAGLKLHPFQIEGVSWLRYS 284

Query: 771  WHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPN 830
            W +    ILADEMGLGKT+    F+ SL+ E   + P L+ VPLST+ NW  E  LWAP 
Sbjct: 285  WGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPE 344

Query: 831  LNVVEYHGCAKARAIIRQYE--WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGV 888
            L  V Y G   ARA+IR++E  +       + +  + YKFNV+LT+YE I  D++ L  +
Sbjct: 345  LYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVMLTSYEFISVDAAFLGCI 404

Query: 889  PWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 948
             W  LVVDE HRL+++ SK F +L+ +   +++LLTGTPLQNN+ E+++LLNFL    F 
Sbjct: 405  DWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFN 464

Query: 949  SLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEY 1008
             L +F+ +F D++  ++V+ L +++ PHMLRRLK D ++++PPK+E +V VELSS+Q ++
Sbjct: 465  DLQTFQAEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKF 524

Query: 1009 YRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP-GTEPDSGSVEFLHEMR- 1066
            Y+ +LTKN++ L   G G    S+LNI+M LRK CNHPYL P   E  + S   L+EM  
Sbjct: 525  YKHILTKNFKALNQKGGGRV-CSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSS 583

Query: 1067 -IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
              KAS KL LL  MLK L  + HRVL+FSQMTK+L+ILE +L  E     Y+R+DGS+  
Sbjct: 584  LTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNILEHFLEGE--GYQYDRIDGSIKG 641

Query: 1126 GDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQ AI RFN   S  FVFLLSTR+ GLGINLATADTVII+DSD+NPH D+QA +RAHR
Sbjct: 642  DLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHR 701

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWG 1237
            +GQ K++++YR V   SVEERI+Q+AK K+ML  L V         + S+ E+EDILR+G
Sbjct: 702  MGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVVRPGMGGMTTNFSKDELEDILRFG 761

Query: 1238 TEELFND 1244
            TE+LF D
Sbjct: 762  TEDLFKD 768



 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 2/56 (3%)

Query: 64  SSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           ++ K+K  D  Y  C +C  GG+LLCCDSCP  YH  CL PPLK IP G W CP+C
Sbjct: 29  NAKKQKFRDEEY--CKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 82


>gi|308501284|ref|XP_003112827.1| CRE-LET-418 protein [Caenorhabditis remanei]
 gi|308267395|gb|EFP11348.1| CRE-LET-418 protein [Caenorhabditis remanei]
          Length = 1884

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 293/722 (40%), Positives = 412/722 (57%), Gaps = 84/722 (11%)

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTL 720
            W Q  R+I+ +S     ++  VKW  L YD+ TWE+ D+  +  Y      + Q   + L
Sbjct: 483  WMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWER-DDANIANYEEAIIRYWQHRERML 541

Query: 721  KKDASEDELPRG--KGDCQQSEIVALTEQPEELK------------------------GG 754
                  D++P+   K   +Q E   L  + EE +                        GG
Sbjct: 542  N-----DDVPKNVQKMIAKQREAKGLPPKEEESRRPKKREKVDIRKKYDVQPDYVSETGG 596

Query: 755  ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPL 814
             L P+QLE +NWLR CW    + ILADEMGLGKTV +  F+ +L  E   K P L+  PL
Sbjct: 597  NLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHCKGPFLIAAPL 656

Query: 815  STMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEW-------HASDPDNLNKKTSSYK 867
            ST+ NW  E  LW P+  VV Y G   +R ++R++E+                K T + K
Sbjct: 657  STIINWEREAELWCPDFYVVTYVGDRDSRVVLREHEFSFVEGAVRTGPKAGKMKTTENMK 716

Query: 868  FNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTP 927
            F+VLLT+YE I  D + L  + W  LVVDE HRLKN+ S  F  LN ++  +RVLLTGTP
Sbjct: 717  FHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTP 776

Query: 928  LQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQ 987
            LQNN+ E+++LLNFL    F  L +F  +F++++   ++E+L  L+ PHMLRRLK D + 
Sbjct: 777  LQNNLEELFHLLNFLSKERFNQLEAFTAEFSEISKEDQIEKLHNLLGPHMLRRLKADVLT 836

Query: 988  NIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPY 1047
             +P K+E +V VELS +Q ++Y+ +LT+N+  L N+  G  Q S++N++M+L+K CNHPY
Sbjct: 837  GMPSKSELIVRVELSPMQKKWYKNILTRNFDAL-NVKNGGTQMSLMNVLMELKKCCNHPY 895

Query: 1048 LIPGTE---PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILE 1104
            L        P   +  +     IK S K  LL  ML+ L   GHRVLIFSQMT +LDI+E
Sbjct: 896  LFVKASLEAPKEKNGMYEGTALIKNSGKFALLQKMLRKLKDGGHRVLIFSQMTMMLDIME 955

Query: 1105 DYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTV 1163
            D+ ++E G K YER+DGS++   RQ AI R+N   + +F+FLLSTR+ GLGINLATADTV
Sbjct: 956  DFCDVE-GYK-YERIDGSITGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTV 1013

Query: 1164 IIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-- 1221
            IIYDSD+NPH DIQA +RAHR+GQ  ++++YR V + SVEERI  +AKKK++L+ L V  
Sbjct: 1014 IIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLNHLVVRA 1073

Query: 1222 ------NKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRG 1275
                   KS S+ E++D+LRWGTEELF +                +E V D  +      
Sbjct: 1074 GLGGKEGKSMSKSELDDVLRWGTEELFKE----------------DECVADTAE------ 1111

Query: 1276 GGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN---LQSGSTDLAEGDLENDMLGSVKAT 1332
               G+  + K T  + +IVWD+ A+  LLDR       +      + D +N+ L S K  
Sbjct: 1112 ---GEGAEKKST--AQEIVWDDAAVDFLLDRDKKEEAAAPEEGEGKADWQNEYLSSFKVA 1166

Query: 1333 EW 1334
             +
Sbjct: 1167 SY 1168



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 28/49 (57%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQL 126
           C  C  GG LL CD+CPR YH  C+D  ++  P G W CP C +   ++
Sbjct: 254 CEECKQGGELLLCDTCPRAYHTPCIDSSMEDPPEGDWSCPHCIEHGPEI 302



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 4/53 (7%)

Query: 68  KKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGK-WQCPKC 119
           +K ND +   C IC    NLL CD+C   +H  C+DPPL ++P  + W CP+C
Sbjct: 308 QKVNDDF---CKICKETENLLLCDTCVCAFHAYCMDPPLTQVPQEETWNCPRC 357


>gi|195496271|ref|XP_002095622.1| GE19602 [Drosophila yakuba]
 gi|194181723|gb|EDW95334.1| GE19602 [Drosophila yakuba]
          Length = 899

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 293/671 (43%), Positives = 404/671 (60%), Gaps = 52/671 (7%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDE------------- 659
            E+ +KW  KS  H  WIPE Q+ +     L N++ +      +  +E             
Sbjct: 109  EYFIKWHDKSYWHCEWIPEWQMLLHHASMLVNFQRRNDMEEPSSLEEFDDQDQDRDLHER 168

Query: 660  --------RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE--PALEK-YSHL 708
                     W + QRV + R          VKW  L Y + +WE  ++  P L++  +H 
Sbjct: 169  YYRYGIRPEWLRVQRVFNHRKEPKDCTFYLVKWRELSYSDSSWEIENDGIPGLKQAIAHY 228

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGAL--FPHQLEALNW 766
             DL      +  KK+  ED  P    D  +       +QP  LK  AL   P Q+E ++W
Sbjct: 229  KDLL-----RLSKKERPEDR-PAPNMDLNKK----YEDQPVFLKEAALKLHPFQMEGVSW 278

Query: 767  LRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFAL 826
            LR  W +    ILADEMGLGKT+    F+ SL+ E   + P L+ VPLST+ NW  E  L
Sbjct: 279  LRYNWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTVANWERELEL 338

Query: 827  WAPNLNVVEYHGCAKARAIIRQYEWHASD--PDNLNKKTSSYKFNVLLTTYEMILADSSH 884
            WAP    + Y G   +RA+IR+ E    +     +  K + YKFNV+LT+YE+I  D + 
Sbjct: 339  WAPEFYCITYVGGKTSRAVIRKNELSCKEVTTKTMRAKQTEYKFNVMLTSYELISLDVAF 398

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L  + W VLVVDE HRLKN+ SK F +LN +   +++LLTGTPLQNN+ E++ LLNFL  
Sbjct: 399  LGSIDWAVLVVDEAHRLKNNQSKFFRMLNKYRIVYKLLLTGTPLQNNLEELFYLLNFLSS 458

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F  L +F+ KF D+   ++V+ L +++APHMLRRLK D ++N+P K E +V VELSS+
Sbjct: 459  DKFDDLQTFQAKFADVAKEEQVKRLHEILAPHMLRRLKADVLKNMPSKAEFIVRVELSSM 518

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSV-EFLH 1063
            Q ++Y+ +LTKN++ L   G G    S+LNI+M LRK CNHPYL      ++  +   L+
Sbjct: 519  QKKFYKLILTKNFKALNKNGGGRV-CSLLNIMMDLRKCCNHPYLFSSAAEEATILPSGLY 577

Query: 1064 EMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
            E+   IKAS KL LL  MLK L  + HRVLIFSQMTK+L+ILED+L  E     YER+DG
Sbjct: 578  EINSLIKASGKLDLLSKMLKQLKADHHRVLIFSQMTKMLNILEDFLEGE--GYQYERLDG 635

Query: 1122 SVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            ++    RQ AI RFN  K+ +FVFLLSTR+ GLGINLATADTVI++DSD+NPH D+QA +
Sbjct: 636  NIRGDLRQEAIDRFNAPKAEQFVFLLSTRAGGLGINLATADTVILFDSDWNPHNDVQAFS 695

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDI 1233
            RAHR+GQ+K++++YR V   SVEERI+Q+ K K+ML  L V       N + ++ E+E+I
Sbjct: 696  RAHRMGQTKKVMIYRFVTHNSVEERIMQVVKHKMMLTHLVVRPGMGGNNNNFTKDELENI 755

Query: 1234 LRWGTEELFND 1244
            LR+GTE+LF D
Sbjct: 756  LRFGTEDLFKD 766



 Score = 71.2 bits (173), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 35/55 (63%), Gaps = 2/55 (3%)

Query: 65  STKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           + K+K  D  Y  C +C  GG+LLCCDSCP  YH  C+ PPLK IP   W CP+C
Sbjct: 27  AKKQKFRDEEY--CRVCKDGGDLLCCDSCPSVYHRTCVIPPLKSIPKKDWICPRC 79


>gi|195591505|ref|XP_002085481.1| GD14801 [Drosophila simulans]
 gi|194197490|gb|EDX11066.1| GD14801 [Drosophila simulans]
          Length = 893

 Score =  508 bits (1307), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 286/669 (42%), Positives = 404/669 (60%), Gaps = 52/669 (7%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDE------------- 659
            E+ +KW   S  H  WI E ++ +     + +++ +  + +   C E             
Sbjct: 113  EYFIKWHDMSYWHCDWISEGKMLLHHATMVASFQRR--SDMEEPCLEELDDQEGDLHERF 170

Query: 660  -------RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE--PALEKYSHLTD 710
                   +W   QRVI+     +G+    VKW  L Y+E +WE+ ++  P L +   L  
Sbjct: 171  YRYGIKPQWLLVQRVINHSKEPNGSTIYLVKWRELSYNESSWEQENDSIPGLNQAIAL-- 228

Query: 711  LFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGAL--FPHQLEALNWLR 768
                +++Q           P    D  +       +QP  LK G L   P Q+E ++WLR
Sbjct: 229  ----YKKQRSSNKGRPKHRPAPTIDLNKK----YEDQPVFLKEGGLKLHPFQMEGVSWLR 280

Query: 769  KCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWA 828
              W +    ILADEMGLGKT+    F+ SL+ E   + P L+ VPLST+PNW  E  LWA
Sbjct: 281  YSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLITVPLSTLPNWERELELWA 340

Query: 829  PNLNVVEYHGCAKARAIIRQYE--WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLR 886
            P L  V Y G   ARA+IR++E  +       + +  + YKFNV+LT+YE I  D++ L 
Sbjct: 341  PELYCVTYVGGKTARAVIRKHELSFEEVTTKTMRENQTQYKFNVMLTSYEFISLDAAFLG 400

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
             + W  LVVDE HRL+++ SK F +L+ +   +++LLTGTPLQNN+ E+++LLNFL    
Sbjct: 401  SIDWAALVVDEAHRLRSNQSKFFRILSRYRIAYKLLLTGTPLQNNLEELFHLLNFLSSGK 460

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQA 1006
            F  L +F+ +F D++  ++V+ L +++ PHMLRRLK D ++++PPK+E +V VELSS+Q 
Sbjct: 461  FNDLQTFQAEFTDVSKEEQVKRLHEILEPHMLRRLKVDVLKSMPPKSEFIVRVELSSMQK 520

Query: 1007 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP-GTEPDSGSVEFLHEM 1065
            ++Y+ +LTKN++ L   G G    S+LNI+M LRK CNHPYL P   E    S   ++EM
Sbjct: 521  KFYKHILTKNFKALNQKGGGRV-CSLLNIMMDLRKCCNHPYLFPSAAEEAPISPSGIYEM 579

Query: 1066 R--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
                KAS KL LL  MLK L K+ HRVL+FSQMTK+L+ILE +L  E     Y+R+DG++
Sbjct: 580  NSLTKASGKLDLLSKMLKQLKKDNHRVLLFSQMTKMLNILEHFLEGE--GYQYDRIDGAI 637

Query: 1124 SVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
                RQ AI RFN   S +FVFLLSTR+ GLGINLATADTVII+DSD+NPH D+QA +RA
Sbjct: 638  RGDLRQKAIDRFNDPGSEQFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRA 697

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKS-------GSQKEVEDILR 1235
            HR+GQ K++++YR V   SVEERI+Q+AK+K+ML  L V           S+ E+EDILR
Sbjct: 698  HRMGQKKKVMIYRFVTHNSVEERIMQVAKRKMMLTHLVVRPGMGGTATHFSKDELEDILR 757

Query: 1236 WGTEELFND 1244
            +GTE+LF D
Sbjct: 758  FGTEDLFKD 766



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/42 (64%), Positives = 30/42 (71%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG+LLCCDSCP  YH  CL PPLK IP G W CP+C
Sbjct: 39  CKVCRDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 80


>gi|109113157|ref|XP_001111066.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like isoform 2
            [Macaca mulatta]
          Length = 1981

 Score =  507 bits (1306), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 327/806 (40%), Positives = 443/806 (54%), Gaps = 134/806 (16%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPAPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E    L    L   +    W  E              G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEV---LDSRTLKGTA----WTGELG-----------RGKKDSRAIIRE 810

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 811  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 868

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 869  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 928

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 929  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 988

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 989  LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1047

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1048 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1105

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1106 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1165

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1166 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1221

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1222 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1250

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1251 DATEDTDVQN---MNEYLSSFKVAQY 1273



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|268557732|ref|XP_002636856.1| C. briggsae CBR-LET-418 protein [Caenorhabditis briggsae]
          Length = 1849

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 307/795 (38%), Positives = 431/795 (54%), Gaps = 106/795 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDE------------- 659
            EF +KW   S    SW+ E  L+V  + +   Y  +  + +    +E             
Sbjct: 410  EFFIKWKYLSYWQCSWVSEMMLEVHFRMQYMMYFRRNDSEIPPEFEESTASRHHSDNDPY 469

Query: 660  -------------RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD------EP 700
                          W Q  R+I+ +S     ++  VKW  L YD  TWE+ D      E 
Sbjct: 470  KLREKYYQFGVKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDAATWERDDADIANYEE 529

Query: 701  ALEKYSH-----LTDLFVQFERQTLKKDASEDELP-----------RGKGDCQQSEIVAL 744
            A+ KY       L D   +  ++ + K      LP           R K D ++   V  
Sbjct: 530  AIIKYWQHRERMLNDDVPKNVQKMIAKHREAKGLPPKEEESRRPKKREKVDIRKKYDV-- 587

Query: 745  TEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEF 802
              QP+ +   GG L P+QLE +NWLR CW    + ILADEMGLGKTV +  F+ +L  E 
Sbjct: 588  --QPDYVSETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEG 645

Query: 803  KAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD------- 855
              K P L+  PLST+ NW  E   W P+  VV Y G   +R ++R++E+   D       
Sbjct: 646  HCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGDRDSRVVLREHEFSFVDGAVRTGP 705

Query: 856  PDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 K T + KF+VLLT+YE I  D + L  + W  LVVDE HRLKN+ S  F  LN +
Sbjct: 706  KAGRMKTTDNLKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEY 765

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
            +  +RVLLTGTPLQNN+ E+++LLNFL    F  L +F  +F++++   ++E+L  L+ P
Sbjct: 766  TIHYRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFSEISKEDQIEKLHNLLGP 825

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D +  +P K+E +V VELS +Q ++Y+ +LT+N+  L N+  G  Q S++N+
Sbjct: 826  HMLRRLKADVLTGMPSKSELIVRVELSQMQKKWYKNILTRNFDAL-NVKNGGTQMSLMNV 884

Query: 1036 VMQLRKVCNHPYLIPGTE---PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +M+L+K CNHPYL        P   +  +     IK S K  LL  ML+ L   GHRVLI
Sbjct: 885  LMELKKCCNHPYLFVKASLEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDTGHRVLI 944

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSC 1151
            FSQMT ++DILED+ ++E G K YER+DGS++   RQ AI R+N   + +FVFLLSTR+ 
Sbjct: 945  FSQMTMMMDILEDFCDVE-GYK-YERIDGSITGQMRQDAIDRYNAPGAQQFVFLLSTRAG 1002

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVIIYDSD+NPH DIQA +RAHR+GQ  ++++YR V + SVEERI  +AK
Sbjct: 1003 GLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKNSVEERITTVAK 1062

Query: 1212 KKLMLDQLFV--------NKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEA 1263
            KK++L+ L V         KS S+ E++D+LRWGTEELF +                   
Sbjct: 1063 KKMLLNHLVVRAGLGGKEGKSMSKTELDDVLRWGTEELFKED-------------EAVAE 1109

Query: 1264 VRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEG---- 1319
              +  +   K+G              + +IVWD+ A+  LLDR   +       +G    
Sbjct: 1110 GAEGAEGAEKKG-------------TTQEIVWDDAAVDFLLDRDKKEETGPGPEDGEGKA 1156

Query: 1320 DLENDMLGSVKATEW 1334
            D +N+ L S K   +
Sbjct: 1157 DWQNEYLSSFKVASY 1171



 Score = 57.4 bits (137), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 3/44 (6%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQ 121
           C  C +GG L+ CD+CPR YH  C+D   +  P G W CP C +
Sbjct: 258 CETCKVGGELVLCDTCPRAYHTGCMD---EDPPEGDWSCPHCIE 298



 Score = 56.6 bits (135), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 4/52 (7%)

Query: 69  KGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGK-WQCPKC 119
           K ND +   C IC    NLL CDSC   +H  C+DPPL ++P  + W CP+C
Sbjct: 310 KQNDDF---CKICKETENLLLCDSCVCAFHAYCIDPPLTQVPQEETWACPRC 358


>gi|109113159|ref|XP_001110923.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like isoform 1
            [Macaca mulatta]
          Length = 1947

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 327/806 (40%), Positives = 443/806 (54%), Gaps = 134/806 (16%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPAPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E    L    L   +    W  E              G   +RAIIR+
Sbjct: 769  IQTIVFLYSLYKEV---LDSRTLKGTA----WTGELG-----------RGKKDSRAIIRE 810

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 811  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 868

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 869  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 928

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 929  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 988

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 989  LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1047

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1048 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1105

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1106 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1165

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1166 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1221

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1222 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1250

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1251 DATEDTDVQN---MNEYLSSFKVAQY 1273



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|24666729|ref|NP_649111.1| Chd3 [Drosophila melanogaster]
 gi|25089877|sp|O16102.3|CHD3_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein 3; AltName:
            Full=ATP-dependent helicase Chd3
 gi|23093148|gb|AAF49162.2| Chd3 [Drosophila melanogaster]
          Length = 892

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 286/667 (42%), Positives = 402/667 (60%), Gaps = 48/667 (7%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINI---------CDER--- 660
            E+ +KW G S  H  WIPE Q+ +     + +++ +      ++           ER   
Sbjct: 112  EYFIKWHGMSYWHCEWIPEGQMLLHHASMVASFQRRSDMEEPSLEELDDQDGNLHERFYR 171

Query: 661  ------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE--PALEKYSHLTDLF 712
                  W   QRVI+     +G     VKW  L Y++ +WE+  +  P L +   L    
Sbjct: 172  YGIKPEWLLVQRVINHSEEPNGGTMYLVKWRELSYNDSSWERESDSIPGLNQAIAL---- 227

Query: 713  VQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK--GGALFPHQLEALNWLRKC 770
              +++        + + P    D  +       +QP  LK  G  L P Q+E ++WLR  
Sbjct: 228  --YKKLRSSNKGRQRDRPAPTIDLNKK----YEDQPVFLKEAGLKLHPFQIEGVSWLRYS 281

Query: 771  WHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPN 830
            W +    ILADEMGLGKT+    F+ SL+ E   + P L+ VPLST+ NW  E  LWAP 
Sbjct: 282  WGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPE 341

Query: 831  LNVVEYHGCAKARAIIRQYE--WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGV 888
            L  V Y G   ARA+IR++E  +       + +  + YKFNV+LT+YE I  D++ L  +
Sbjct: 342  LYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVMLTSYEFISVDAAFLGCI 401

Query: 889  PWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 948
             W  LVVDE HRL+++ SK F +L+ +   +++LLTGTPLQNN+ E+++LLNFL    F 
Sbjct: 402  DWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFN 461

Query: 949  SLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEY 1008
             L +F+ +F D++  ++V+ L +++ PHMLRRLK D ++++PPK+E +V VELSS+Q ++
Sbjct: 462  DLQTFQAEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKF 521

Query: 1009 YRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP-GTEPDSGSVEFLHEMR- 1066
            Y+ +LTKN++ L   G G    S+LNI+M LRK CNHPYL P   E  + S   L+EM  
Sbjct: 522  YKHILTKNFKALNQKGGGRV-CSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSS 580

Query: 1067 -IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
              KAS KL LL  MLK L  + HRVL+FSQMTK+L++LE +L  E     Y+R+DGS+  
Sbjct: 581  LTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGE--GYQYDRIDGSIKG 638

Query: 1126 GDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQ AI RFN   S  FVFLLSTR+ GLGINLATADTVII+DSD+NPH D+QA +RAHR
Sbjct: 639  DLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHR 698

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWG 1237
            +GQ K++++YR V   SVEERI+Q+AK K+ML  L V         + S+ E+EDILR+G
Sbjct: 699  MGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVVRPGMGGMTTNFSKDELEDILRFG 758

Query: 1238 TEELFND 1244
            TE+LF D
Sbjct: 759  TEDLFKD 765



 Score = 77.0 bits (188), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 2/56 (3%)

Query: 64  SSTKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           ++ K+K  D  Y  C +C  GG+LLCCDSCP  YH  CL PPLK IP G W CP+C
Sbjct: 26  NAKKQKFRDEEY--CKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79


>gi|170036699|ref|XP_001846200.1| chromodomain helicase-DNA-binding protein 3 [Culex quinquefasciatus]
 gi|167879513|gb|EDS42896.1| chromodomain helicase-DNA-binding protein 3 [Culex quinquefasciatus]
          Length = 1982

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 300/714 (42%), Positives = 409/714 (57%), Gaps = 96/714 (13%)

Query: 641  KLENYKAKYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEP 700
            +LE    KYG          W    RVI+ R+ +DG    FVKW  LPY+  TWE+ D+ 
Sbjct: 612  ELEEKYYKYGVK------PEWLNVHRVINHRTMRDGRTLYFVKWRELPYEAATWEEEDDE 665

Query: 701  ------ALEKYSHL-----------------TDLFVQFERQTLKKDASEDEL-PRGKGDC 736
                  A+E Y  L                      +  +   K+   ED + PR     
Sbjct: 666  VPGLKNAIEYYMDLRANCSNEINSSSSSSSSKKSKKKGRKSRTKELEDEDRIGPRRYTPP 725

Query: 737  QQSEIVALTE----QPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVS 790
             +     L      QP  L   G  L P+QLE +NWLR  W    + ILADEMGLGKT+ 
Sbjct: 726  PEKPTTDLRRKYEVQPTYLDDTGMRLHPYQLEGINWLRYSWSNETDTILADEMGLGKTIQ 785

Query: 791  ACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYE 850
               F+ SLY E   K P LV VPLST+ NW  EF  WAP+   + Y G   +RAIIR++E
Sbjct: 786  TATFLYSLYKEGHCKGPFLVAVPLSTIINWEREFETWAPDFYCITYVGDKDSRAIIREHE 845

Query: 851  WHASDPDNLNKKTS-----SYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSG 905
                +      + S     + KFNVLLT+YEM+  D++ L  + W VLVVDE HRLK++ 
Sbjct: 846  LSFEEGAVRGGRASKIRANTIKFNVLLTSYEMVSLDAACLGSIDWSVLVVDEAHRLKSNQ 905

Query: 906  SKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQK 965
            SK F +L +++  +++LLTGTPLQNN+ E+++LLNFL    F  L  F+ +F D+    +
Sbjct: 906  SKFFKVLANYNIAYKLLLTGTPLQNNLEELFHLLNFLNKNKFNDLGVFQNEFADINKEDQ 965

Query: 966  VEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGK 1025
            V++L +++ PHMLRRLK D ++N+P K+E +V V+LS +Q +YY+ +LT+N++ L   G 
Sbjct: 966  VKKLHEMLGPHMLRRLKADVLKNMPTKSEFIVRVDLSPMQKKYYKYILTRNFEALNPKGG 1025

Query: 1026 GVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLHSMLKV 1082
            G A  S++NI+M L+K CNHPYL        P      +      KA+ KL LL  MLK 
Sbjct: 1026 GGA-CSLINIMMDLKKCCNHPYLFQAAVEEAPLGPGGNYEITALTKAAGKLVLLEKMLKQ 1084

Query: 1083 LYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-R 1141
            L + GHRVLIFSQMTK+LDI+ED+L    G K YER+DG ++   RQ AI RFN   + +
Sbjct: 1085 LKETGHRVLIFSQMTKMLDIMEDFLE-GIGYK-YERIDGGITGTLRQEAIDRFNAPGAQQ 1142

Query: 1142 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRAS 1201
            F FLLST++ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V R S
Sbjct: 1143 FCFLLSTKAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNS 1202

Query: 1202 VEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRWGTEELFNDSPGINGKDMG 1254
            VEER+ Q+AK+K+ML  L V         + +++E++DILR+GTEELF +    +GKD  
Sbjct: 1203 VEERVTQVAKRKMMLTHLVVRPGMGGKGANFTKQELDDILRFGTEELFKE----DGKD-- 1256

Query: 1255 ENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
                  EEA+                              +D+ A+A LLDR+N
Sbjct: 1257 ------EEAIH-----------------------------YDDKAVAELLDRTN 1275



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 30/43 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C IC  GG LLCCD CP  YH  CL PPL  IP+G W+CP+C+
Sbjct: 461 CRICKDGGELLCCDMCPSAYHTFCLTPPLDDIPDGDWRCPRCS 503



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)

Query: 70  GNDGYYYE---CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           G+DG +     C +C  GG ++ CD+CP+ YHL CL+P L+  P GKW CP C
Sbjct: 391 GDDGEHEHQDFCEVCQQGGEIILCDTCPKAYHLVCLEPELEDTPEGKWSCPTC 443


>gi|42567315|ref|NP_194918.2| putative chromatin remodeling factor [Arabidopsis thaliana]
 gi|332660576|gb|AEE85976.1| putative chromatin remodeling factor [Arabidopsis thaliana]
          Length = 1202

 Score =  504 bits (1299), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 288/677 (42%), Positives = 422/677 (62%), Gaps = 52/677 (7%)

Query: 609  AVSYEFLVKWVGKSNIHNSWIPESQ------------LKVLAKR---KLENYKAKYGTTV 653
             V  ++LVKW G S +H SW+PE +            LK+   R    ++ + A+ G   
Sbjct: 74   VVVKQYLVKWKGLSYLHCSWVPEQEFEKAYKSHPHLKLKLRVTRFNAAMDVFIAENGAHE 133

Query: 654  INICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFV 713
                   WK   R+I+ R   DG  E  VK+  L Y    WE   E  +  + +    F 
Sbjct: 134  FIAIRPEWKTVDRIIACREGDDG-EEYLVKYKELSYRNSYWES--ESDISDFQNEIQRFK 190

Query: 714  QFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHK 773
                 + +    E+E  R + + +Q ++      PE L G  L  +QLE LN+LR  W K
Sbjct: 191  DINSSSRRDKYVENE--RNREEFKQFDLT-----PEFLTG-TLHTYQLEGLNFLRYSWSK 242

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
              NVILADEMGLGKT+ + AF++SL+ E  +  P LV+ PLST+ NW  EFA WAP++NV
Sbjct: 243  KTNVILADEMGLGKTIQSIAFLASLFEENLS--PHLVVAPLSTIRNWEREFATWAPHMNV 300

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
            V Y G ++AR +I ++E++ S+     +K+   KF+VLLTTYEM+    S L  + W  +
Sbjct: 301  VMYTGDSEARDVIWEHEFYFSE----GRKS---KFDVLLTTYEMVHPGISVLSPIKWTCM 353

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
            ++DEGHRLKN  SKL+S L+ F+ +H VLLTGTPLQNN+ E++ L++FL    F SL   
Sbjct: 354  IIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGSL--- 410

Query: 954  EEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQN-IPPKTERMVPVELSSIQAEYYRAM 1012
             EKF D+   +++  L +++APH+LRRLKKD +++ +PPK E ++ V++SS Q E Y+A+
Sbjct: 411  -EKFQDINKEEQISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAV 469

Query: 1013 LTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAK 1072
            +T NYQ+L    K  A+ S  N++M+LR+VC+HPYL+P  EP            ++AS K
Sbjct: 470  ITNNYQVL--TKKRDAKIS--NVLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLEASGK 525

Query: 1073 LTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAI 1132
            L LL  M+  L ++GHRVLI++Q    L +LEDY    F    YER+DG +S  +RQ  I
Sbjct: 526  LQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFT--FKNWNYERIDGKISGPERQVRI 583

Query: 1133 TRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRL 1191
             RFN + S RF FLLSTR+ G+GINLATADTVIIYDSD+NPHAD+QAM R HR+GQ+ ++
Sbjct: 584  DRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKV 643

Query: 1192 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG-SQKEVEDILRWGTEELF---NDSPG 1247
            ++YRL+ + +VEER++++ K K++L+ L V K    Q E++DI+++G++ELF   ND  G
Sbjct: 644  MIYRLIHKGTVEERMMEITKNKMLLEHLVVGKQHLCQDELDDIIKYGSKELFSEENDEAG 703

Query: 1248 INGKDMGENNTSIEEAV 1264
             +GK +  ++ +IE+ +
Sbjct: 704  RSGK-IHYDDAAIEQLL 719


>gi|324499809|gb|ADY39928.1| Chromodomain-helicase-DNA-binding protein 3 [Ascaris suum]
          Length = 1844

 Score =  504 bits (1298), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 305/727 (41%), Positives = 404/727 (55%), Gaps = 97/727 (13%)

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD------EPALEKYSHLTDLFVQ 714
            W Q  R+I+         +  VKW  L Y++ TWE+ D      E A+ KY         
Sbjct: 507  WMQVHRIINHVQYGKTQFDYLVKWRELVYEQATWERDDFEIIGYEEAIVKYWQ------- 559

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTE--------------------QPEELK-- 752
              R+ +  D     + +     + +E +   E                    QP+ +   
Sbjct: 560  -HRERMNGDVIPKHIAKKIASKKAAEGIDEEEENKKKKKKDVKVDLRKKYETQPDFITET 618

Query: 753  GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLV 812
            GG L  +QLE +NWLR CW +  + ILADEMGLGKT+ + AF+ SL  E   + P LV  
Sbjct: 619  GGKLHDYQLEGVNWLRHCWSQGTDAILADEMGLGKTIQSMAFLYSLVKEGHTRGPFLVAA 678

Query: 813  PLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHA------SDPDNLNKKT-SS 865
            PLST+ NW  E   W P+  VV Y G   +R +IR++E+          P     KT   
Sbjct: 679  PLSTLINWEREAEFWCPDFYVVTYVGDKDSRTVIREHEFSFIEGAVRGGPKVTRMKTDQG 738

Query: 866  YKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTG 925
             KF+VLLT+YE+I  D + L  + W  LVVDE HRLKN+ S  F  L  F   +R+LLTG
Sbjct: 739  IKFHVLLTSYELINIDKTILSSIEWAGLVVDEAHRLKNNQSLFFRTLRDFKIGYRLLLTG 798

Query: 926  TPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDA 985
            TPLQNN+ E+++LLNFL P  F  L SF  +F +++   ++++L  L+ PHMLRRLK D 
Sbjct: 799  TPLQNNLEELFHLLNFLSPDRFYDLESFTHEFAEISKEDQIQKLHSLLGPHMLRRLKADV 858

Query: 986  MQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNH 1045
            +  +P K+E +V VELS +Q +YY+ +LT+N++ L   G G  Q S+LNI+M L+K CNH
Sbjct: 859  LSGMPSKSELIVRVELSPMQKKYYKNILTRNFEALNPKGGGT-QVSLLNIIMDLKKCCNH 917

Query: 1046 PYLIPGTE---PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDI 1102
            PYL P      P   +  +     IKAS K  LL  ML+ L ++GHRVLIFSQMTK+LD+
Sbjct: 918  PYLFPKASIEAPKHKNGMYEGTALIKASGKFILLQKMLRKLKEQGHRVLIFSQMTKMLDV 977

Query: 1103 LEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATAD 1161
            LED+   E G K YER+DGS++   RQ AI RFN  +  +FVFLLSTR+ GLGINLATAD
Sbjct: 978  LEDFCENE-GYK-YERIDGSITGQARQDAIDRFNAPNAQQFVFLLSTRAGGLGINLATAD 1035

Query: 1162 TVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            TVIIYDSD+NPH DIQA +RAHRIGQ  ++L+YR V R SVEERI  +AKKK++L  L V
Sbjct: 1036 TVIIYDSDWNPHNDIQAFSRAHRIGQQNKVLIYRFVTRNSVEERITSVAKKKMLLTHLVV 1095

Query: 1222 NKSGSQK-------EVEDILRWGTEELFN-DSPGINGKDMGENNTSIEEAVRDLEQKHRK 1273
                 QK       E++D+LRWGTEELF  D  G  G D  E  TS +E           
Sbjct: 1096 RAGIGQKGPSMSKSELDDVLRWGTEELFKEDEAGTEG-DGAEKKTSEQE----------- 1143

Query: 1274 RGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLE------NDMLG 1327
                               I+WD+ A+  LLDR+      T    GD E      N+ L 
Sbjct: 1144 -------------------IIWDDGAVDALLDRT--PGDDTKEGGGDGEKREHWTNEYLS 1182

Query: 1328 SVKATEW 1334
            S K  ++
Sbjct: 1183 SFKVAQY 1189



 Score = 70.1 bits (170), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 30/42 (71%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C   G LLCCD+CP +YH  C++PPL  +P G+W CP+C
Sbjct: 323 CRVCKDVGWLLCCDTCPSSYHAYCMNPPLTEVPEGEWSCPRC 364



 Score = 67.4 bits (163), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 10/60 (16%)

Query: 70  GNDGYYYE----------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           G+DGY             C +C  GG ++ CD+CP+ YH+ CLDP ++  P G W CP C
Sbjct: 241 GDDGYEVNELFQTDHQDYCEVCQQGGEIILCDTCPKAYHMVCLDPDMEEAPEGHWSCPSC 300


>gi|341890749|gb|EGT46684.1| hypothetical protein CAEBREN_05565 [Caenorhabditis brenneri]
          Length = 1728

 Score =  501 bits (1291), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 317/838 (37%), Positives = 458/838 (54%), Gaps = 123/838 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-----------------YGTTVIN 655
            EF VK+   S +   W+ E +++V   R    Y  +                 +G    N
Sbjct: 404  EFFVKYKKLSYLRCVWLSEVEMEVYHDRIYRPYLRRTDMDHPPVFDEFSCSHHHGNDPYN 463

Query: 656  ICDERWK--------QPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD-------EP 700
            + +  ++        Q  ++I+ +      ++ +V W  + + + TWE+ D       E 
Sbjct: 464  LRERFFQFGVNPENVQVHKIINHKIYGRSEQDYYVVWRKMDFCDATWERCDDKQIPNFED 523

Query: 701  ALEKY--------------SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEI-VALT 745
            A+ KY              + L  + VQ ERQ L         PR       +E+ V L 
Sbjct: 524  AIIKYWIHRERMLGDQIPKNVLRMIAVQRERQGLS--------PRNDVSMNNNEVKVDLR 575

Query: 746  E----QPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCE 801
            E    QP+ + GG L P+QLE +NWLR CW    + ILADEMGLGKT+ +  F+ SL  E
Sbjct: 576  EKYETQPDYVTGGTLHPYQLEGINWLRHCWSTGTDAILADEMGLGKTIQSLTFLYSLMKE 635

Query: 802  FKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNK 861
              +  P L+  PLST+ NW  E   W P+  V+ Y G A++R +IR  E+  ++      
Sbjct: 636  GHSMGPFLIAAPLSTIRNWEREAEQWCPDFYVITYTGNAESREVIRDNEFSFAEKAVRAG 695

Query: 862  KTS------SYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
            K S      S KF+VLLT+YE+I  D + L  + W+ LVVDE HRLKN+ S  F  L  +
Sbjct: 696  KLSRIRNQNSLKFHVLLTSYEIINNDKAILSSINWDALVVDEAHRLKNNESLFFKNLLDY 755

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
             F +R+LLTGTPLQNN+ E+++LLNFL P  F  L +F+ + ++++   ++ +L  L+ P
Sbjct: 756  RFSYRLLLTGTPLQNNLDELFHLLNFLSPDRFNELETFKAELSEISKEDQINKLHALLGP 815

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            HMLRRLK D +  +P K+E +V VELS +Q  YY+ +LT+N++ L N+  G AQ S+ NI
Sbjct: 816  HMLRRLKADVLTGMPTKSELIVRVELSPMQKTYYKNILTRNFEAL-NVKNG-AQVSLNNI 873

Query: 1036 VMQLRKVCNHPYLIPGTE---PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            +++L+K CNHPYL        P      +  E  IK S K  LL  M++ L   GHRVLI
Sbjct: 874  LVELKKCCNHPYLFAKASIEAPKRQDSYYEGEDLIKNSGKFILLQKMMRKLKDGGHRVLI 933

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSC 1151
            FSQMT +LDILED+ + E     +ER+DG+++   RQ AI RFN  +S+ FVFLLSTR+ 
Sbjct: 934  FSQMTMMLDILEDFCHNE--DYQFERIDGNITGEKRQEAIDRFNDPESQAFVFLLSTRAG 991

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINLATADTVIIYDSD+NPH D QA++RAHR+GQ  ++++YR V + SVEERI  +AK
Sbjct: 992  GLGINLATADTVIIYDSDWNPHNDTQALSRAHRLGQKNKVMIYRFVTKNSVEERITSVAK 1051

Query: 1212 KKLMLDQLFVNKSG--------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEA 1263
            KK++L  L V ++G        S+ E++D+LRWGTEELF +                EE 
Sbjct: 1052 KKMLLTHLVV-RAGRGAKEEKMSKSELDDVLRWGTEELFKE----------------EET 1094

Query: 1264 VRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLEN 1323
              D          G G     K TE   +IVWD+ A+  LLDR   + G+    +    N
Sbjct: 1095 TAD----------GEGTSEARKTTE--QEIVWDDAAVDFLLDRDKEEEGADGEKKEHWTN 1142

Query: 1324 DMLGSVKATEWNEETTEDQAESPVAAVDDASAENSERKEENAVTGIEENEWDRLLRVR 1381
            + L S K   ++ ++ +   E       DA +E+ ++KE +       N W++LL+ R
Sbjct: 1143 EYLSSFKVATYHTKSNDKMEE-------DAVSEDHKQKEADP------NYWEKLLKHR 1187



 Score = 56.6 bits (135), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C IC    + L C +CP  YH  CL+PPL  +P+  W CP+C
Sbjct: 309 CQICKDNDHTLLCATCPNAYHAYCLNPPLDEMPDDDWFCPRC 350



 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 39/93 (41%), Gaps = 16/93 (17%)

Query: 52  KRRLKNEINAD----------RSSTKKKGNDGYYYE-----CVICDLGGNLLCCDSCPRT 96
           KRR K E NA           R++ K +   G   E     C  CD  G L+ C +C R 
Sbjct: 206 KRRQKRETNATNKIQDALEQARATRKARLEKGEAVEPHLRCCAECDQAGELVMCSTCERM 265

Query: 97  YHLQCLDPPLKRIPNGKWQCPKCTQKNDQLKPI 129
           YH  C+DP     P G W C  C  KN    PI
Sbjct: 266 YHCVCIDPNSDEPPKGVWSCVHCM-KNGPGFPI 297


>gi|355753729|gb|EHH57694.1| hypothetical protein EGM_07385 [Macaca fascicularis]
          Length = 1961

 Score =  501 bits (1290), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 322/806 (39%), Positives = 437/806 (54%), Gaps = 155/806 (19%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK-------- 648
            P V     ++G++   EF VKWVG S  H SW  E QL++       NY+ K        
Sbjct: 534  PDVPAPRPLQGRS-EREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPP 592

Query: 649  --YGTTVIN-ICDER----------------------WKQPQRVISLRSSKDGTREAFVK 683
              YG+   +   D+R                      W    R+I+    K G     VK
Sbjct: 593  LDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVK 652

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--------KGD 735
            W  LPYD+ TWE+ DE  + +Y      + +     + +D ++   PR         +GD
Sbjct: 653  WRDLPYDQSTWEE-DEMNIPEYEEHKQSYWRHRELIMGEDPAQ---PRKYKKKKKELQGD 708

Query: 736  CQQSE-----IVALTEQPEELK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
               S       V    QP  +   GG L  +QLE LNWLR  W +  + ILADEMGLGKT
Sbjct: 709  GPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKT 768

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            +    F+ SLY E                                        +RAIIR+
Sbjct: 769  IQTIVFLYSLYKE---------------------------------------DSRAIIRE 789

Query: 849  YEWHASDPDNL---------NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             E+  S  DN           K+ +  KF+VLLT+YE+I  D + L  + W  LVVDE H
Sbjct: 790  NEF--SFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAH 847

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ SK F +LN +   H++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D
Sbjct: 848  RLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAD 907

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            ++   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ 
Sbjct: 908  ISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEA 967

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLL 1076
            L + G G  Q S+LNI+M L+K CNHPYL P      P   S  +     IK+S KL LL
Sbjct: 968  LNSRGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLL 1026

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              ML+ L ++GHRVLIFSQMTK+LD+LED+L+ E G K YER+DG ++   RQ AI RFN
Sbjct: 1027 QKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE-GYK-YERIDGGITGALRQEAIDRFN 1084

Query: 1137 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
               + +F FLLSTR+ GLGINLATADTVII+DSD+NPH DIQA +RAHRIGQ+ ++++YR
Sbjct: 1085 APGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYR 1144

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFV-----NKSG--SQKEVEDILRWGTEELFNDSPGI 1248
             V RASVEERI Q+AK+K+ML  L V     +K+G  S++E++DIL++GTEELF D    
Sbjct: 1145 FVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKD---- 1200

Query: 1249 NGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
              ++ GEN                               E S+ I +D  AIARLLDR+ 
Sbjct: 1201 --ENEGENK-----------------------------EEDSSVIHYDNEAIARLLDRNQ 1229

Query: 1309 LQSGSTDLAEGDLENDMLGSVKATEW 1334
              +  TD+      N+ L S K  ++
Sbjct: 1230 DATEDTDVQN---MNEYLSSFKVAQY 1252



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 72  DGYYYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           D +   C +C  GG LLCCD+C  +YH+ CL+PPL  IPNG+W CP+CT
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501



 Score = 73.9 bits (180), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 4/58 (6%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQ 125
           DGY  +    C +C  GG ++ CD+CPR YHL CLDP L R P GKW CP C ++  Q
Sbjct: 372 DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQ 429


>gi|281203153|gb|EFA77354.1| chromo domain-containing protein [Polysphondylium pallidum PN500]
          Length = 1842

 Score =  501 bits (1289), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 290/690 (42%), Positives = 410/690 (59%), Gaps = 60/690 (8%)

Query: 612  YEFLVKWVGKSNIHNSWIP-ESQLKVLAKRKLENY-------------KAKYGTTVINIC 657
            YEFLVKW G ++IHN+W   E+ +     +KL NY              ++      +I 
Sbjct: 545  YEFLVKWKGWAHIHNTWDNYETLMGFKGGKKLTNYAKNIIELNQWRKEASREDIEQADIA 604

Query: 658  DERWKQP-------QRVISLR-----SSKDGTREAFVKWTGLPYDECTWEKLDEPALEKY 705
             E  +Q        +R+I+ R     +   G  +  VKW   PY + TWE  +E  L  Y
Sbjct: 605  KELTQQEYQESLKVERIIASREVEVTTEYPGGIQYLVKWGSTPYSDVTWEYPEEIKL--Y 662

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALN 765
             +  D ++  ERQ   +  S+           +   V   EQP+ +  G L  +Q+E LN
Sbjct: 663  QNEIDDYL--ERQQAAQSNSKHTGGVSPKKRLEQGFVKFEEQPDWINAGKLRDYQMEGLN 720

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            WL   W  + NVILADEMGLGKT+   +FIS L+       P LV+VPLST+ NW  EF 
Sbjct: 721  WLVHSWKNNTNVILADEMGLGKTIQTISFISYLFNVQNLSGPFLVVVPLSTIENWHREFT 780

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             WAP +N++ Y G + +R IIRQ+E++   P    KK  S  FNVLLTTY+ IL D ++L
Sbjct: 781  KWAPKMNLIVYTGSSASRDIIRQFEFY--QPTRFGKKKIS--FNVLLTTYDFILKDKNYL 836

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
              + WE L VDE HRLKN+ S L  +L  F   +R+L+TGTPLQN++ E++NLLNFL P 
Sbjct: 837  GAIKWEYLAVDEAHRLKNNESMLHEVLKYFHTSNRLLVTGTPLQNSLKELWNLLNFLMPN 896

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
             F SL  F++++ DL    ++ EL  ++ PH+LRR+KK+  +++P KTER++ V+LS  Q
Sbjct: 897  KFHSLDEFQDQYADLKEKDQIAELHNVLKPHLLRRIKKEVEKSLPAKTERILRVDLSPTQ 956

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEM 1065
             +YYR +L+KN+  L    KG  + ++LNIV +L+K CNHPYL    E D  +   L  M
Sbjct: 957  KKYYRWILSKNFHELNKGVKG-EKTTLLNIVAELKKTCNHPYLFENAE-DLNAENPLDAM 1014

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             +KAS KL LL  +L  L + GHRVLIFSQM ++LDIL DYL        ++R+DGS S 
Sbjct: 1015 -VKASGKLILLDKLLVRLKETGHRVLIFSQMVRMLDILADYLKGR--GFLFQRLDGSTSR 1071

Query: 1126 GDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              R  A+ RFN + S  F FLLSTR+ GLGINL+TADTVII+DSD+NP  D+QA  RAHR
Sbjct: 1072 EKRSQAMDRFNAEGSPDFAFLLSTRAGGLGINLSTADTVIIFDSDWNPQNDLQAEARAHR 1131

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN---KSGS---------QKEVED 1232
            IGQ   + +YRLV ++++EE IL+ AK+K++LD L +    KS +         ++E++ 
Sbjct: 1132 IGQKNTVNIYRLVSKSTIEEEILERAKQKMVLDHLVIQSMEKSSTKTTSSNVFNKEELDA 1191

Query: 1233 ILRWGTEELFNDSPGINGKDMGENNTSIEE 1262
            IL++G E+LF        K+  EN+ +++E
Sbjct: 1192 ILKFGAEDLF--------KEGDENSNTMQE 1213


>gi|260812970|ref|XP_002601193.1| hypothetical protein BRAFLDRAFT_183803 [Branchiostoma floridae]
 gi|229286484|gb|EEN57205.1| hypothetical protein BRAFLDRAFT_183803 [Branchiostoma floridae]
          Length = 964

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 295/676 (43%), Positives = 400/676 (59%), Gaps = 96/676 (14%)

Query: 746  EQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFK 803
            +QPE +   GG L P+QLE LNWLR  W +  + ILADEMGLGKT+    F++SL+ E  
Sbjct: 245  KQPEFIDDTGGTLHPYQLEGLNWLRFSWSQGTDTILADEMGLGKTIQTICFLNSLFQEGH 304

Query: 804  AKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN--- 860
            +K P L+  PLST+ NW  EF  WAP++ VV Y G   +R++IR++E+   D D +    
Sbjct: 305  SKGPFLISAPLSTIINWEREFEFWAPDMYVVTYCGDKDSRSVIREHEF-CFDDDAVKGGK 363

Query: 861  -----KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
                 KK S  KF+VLLT+YE+I  D + L+ + W VLVVDE HRLKN+ SK F +LN +
Sbjct: 364  KAQRIKKDSQVKFHVLLTSYELISIDVATLQSIDWSVLVVDEAHRLKNNQSKFFRILNGY 423

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
               +++LLTGTPLQNN+ E+++LLNFL    F +L  F E+F D++  +K+ +L  ++ P
Sbjct: 424  KIAYKLLLTGTPLQNNLEELFHLLNFLCSERFNNLQEFLEEFQDMSKDEKISKLHDMLGP 483

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 1035
            H+LRRLK D ++ IP K+E +V VEL+ +Q +YY+ +LT+N++ L   G G    S+LN+
Sbjct: 484  HLLRRLKADVLKGIPAKSEFIVRVELAPMQKKYYKWILTRNFEALNTKGSG-HHVSLLNV 542

Query: 1036 VMQLRKVCNHPYLIPGT------------EPDSGSVEFLHEMRI-----------KASAK 1072
            +M L+K CNHPYL P               P     + +   R+           K   K
Sbjct: 543  MMDLKKCCNHPYLFPTAAMVTLTNKEIYKHPYLYPTDAMEAPRLPNHAYEGSGLKKNCGK 602

Query: 1073 LTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAI 1132
            L +L  MLK L  +GHRVLIFSQMTK+LDILED+   E G K YER+DG V+   RQ AI
Sbjct: 603  LMVLGRMLKKLQAQGHRVLIFSQMTKMLDILEDFCEAE-GYK-YERIDGGVTGTLRQDAI 660

Query: 1133 TRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRL 1191
             RFN   S  FVFLLSTR+ GLGINLATADTV IYDSD+NPH DIQA +RAHRIGQ+ ++
Sbjct: 661  DRFNAPGSPHFVFLLSTRAGGLGINLATADTVFIYDSDWNPHNDIQAFSRAHRIGQANKV 720

Query: 1192 LVYRLVVRASVEERILQLAKKKLMLDQLFVN--------KSGSQKEVEDILRWGTEELFN 1243
            ++YR V RASVEERI Q+AKKK+ML  L V          S S++E++DILR+GTEELF 
Sbjct: 721  MIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSKSATSMSKQELDDILRFGTEELFK 780

Query: 1244 DSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARL 1303
            D   + G+D GE  T+I                                  +DE+AI +L
Sbjct: 781  DDAILEGED-GEEGTAIH---------------------------------YDESAINKL 806

Query: 1304 LDRSNLQSGSTDLAEGDLENDMLGSVKATEWNEETTEDQAESPVAAVDDASAENSERKEE 1363
            LDRS          EG +E       K +E NE  +  +  + V    +   E      +
Sbjct: 807  LDRSQ---------EGLIE-------KESELNEYLSSFKVAAYVMKDQNEEEEIEREVIK 850

Query: 1364 NAVTGIEENEWDRLLR 1379
            + V   + + W++LLR
Sbjct: 851  DEVEQCDPDYWEKLLR 866


>gi|367020200|ref|XP_003659385.1| CDH1-like protein [Myceliophthora thermophila ATCC 42464]
 gi|347006652|gb|AEO54140.1| CDH1-like protein [Myceliophthora thermophila ATCC 42464]
          Length = 1670

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 289/656 (44%), Positives = 398/656 (60%), Gaps = 64/656 (9%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENY---------KAKYGTTVINICD-ER 660
            +E+ +KW GKS++HN+W   ES       R+LENY           K+G   I+    E+
Sbjct: 292  FEYYIKWQGKSHLHNTWETTESVAGFRGFRRLENYFKKTVEYELDLKFGGDEISPEQREQ 351

Query: 661  W--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYS 706
            W               + +R++S+R  ++G  E FVKW GL YD+CTWE     A    S
Sbjct: 352  WLLDREREEEALDDYTKVERIVSVRDGENGM-EYFVKWKGLQYDDCTWED----AALISS 406

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQ-QSEIVALTEQPEELKGGALFPHQLEALN 765
            H  D   QF  ++ +   S+    R + +   +S +  L +QP  +KGG L   QL+ LN
Sbjct: 407  HAQDKIDQFLDRSTRSWQSD----RKQANLDTRSRMTKLEKQPPYIKGGELREFQLKGLN 462

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            +L   W +  NVILADEMGLGKTV   +F+S L  +   + P LV+ PLS +P W   F 
Sbjct: 463  FLALNWTRGNNVILADEMGLGKTVQTVSFLSWLRNDRGQEGPFLVVAPLSVIPAWCDTFN 522

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             WAP+LN V Y G   ARA IR+YE      D   KKT   KFNVL+T+Y+ ILAD+  L
Sbjct: 523  NWAPDLNYVVYLGPEAARANIREYELFI---DGNPKKT---KFNVLVTSYDYILADAETL 576

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP- 944
            +G+ W+VL VDE HRLKN  S+L+  LNSF    RVL+TGTP+QNN+ E+  LL+FL P 
Sbjct: 577  KGIKWQVLAVDEAHRLKNRESQLYYKLNSFGIPCRVLITGTPIQNNLAELSALLDFLNPG 636

Query: 945  -----------ASFPSLSSFEEKFND---LTTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
                       +S  +  + +E+ N+   L T +K+ EL   +AP +LRR K+    ++P
Sbjct: 637  KVLIDEELELLSSADNKDATDEEQNEARRLKTQEKLRELHSAIAPFILRRTKETVESDLP 696

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 1050
            PKTE+++ VELS +Q EYY+ +LT+NY  LR+   G  +QS+LNI+M+L+KV NHPY+  
Sbjct: 697  PKTEKIIRVELSDVQLEYYKNILTRNYAALRDASNG-HKQSLLNIMMELKKVSNHPYMFQ 755

Query: 1051 GTEPD--SGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDY 1106
            G E    +GS     +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL DY
Sbjct: 756  GAEERVLAGSTRREDQIKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVKMLDILGDY 815

Query: 1107 LNIEFGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVII 1165
            L +      ++R+DG++  G R+ AI  FN +D   F FLLSTR+ GLGINL TADTVII
Sbjct: 816  LRVR--GYQFQRLDGTIPAGPRRMAINHFNAEDSEDFCFLLSTRAGGLGINLMTADTVII 873

Query: 1166 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            YDSD+NP AD+QAM RAHRIGQ K + VYRLV + ++EE ++  A+ KL L+ L +
Sbjct: 874  YDSDWNPQADLQAMARAHRIGQKKPVSVYRLVAKQTIEEEVVNRARNKLFLEYLTI 929


>gi|158300661|ref|XP_320523.4| AGAP012009-PA [Anopheles gambiae str. PEST]
 gi|157013268|gb|EAA00692.4| AGAP012009-PA [Anopheles gambiae str. PEST]
          Length = 2037

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 270/574 (47%), Positives = 372/574 (64%), Gaps = 64/574 (11%)

Query: 753  GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLV 812
            G  L P+QLE +NWLR  W    + ILADEMGLGKT+    F+ SLY E   + P LV V
Sbjct: 770  GMRLHPYQLEGINWLRYSWANGTDTILADEMGLGKTIQTATFLYSLYKEGHCRGPFLVAV 829

Query: 813  PLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ----YEWHASDPDNLNK-KTSSYK 867
            PLST+ NW  EF  WAP+   + Y G  ++RA+IR+    +E  A      ++ + SS K
Sbjct: 830  PLSTIINWEREFETWAPDFYCITYVGDKESRAVIRENELSFEEGAVRGGKASRIRASSIK 889

Query: 868  FNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTP 927
            FNVLLT+YE+I  D++ L  + W VLVVDE HRLK++ SK F +LN+++  +++LLTGTP
Sbjct: 890  FNVLLTSYELISIDAACLGSIDWSVLVVDEAHRLKSNQSKFFKVLNAYNIAYKLLLTGTP 949

Query: 928  LQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQ 987
            LQNN+ E+++LLNFL  + F  L+ F+ +F D++  ++V+ L +++ PHMLRRLK D ++
Sbjct: 950  LQNNLEELFHLLNFLNKSKFNELAEFQNEFADISKEEQVKRLHEMLGPHMLRRLKADVLK 1009

Query: 988  NIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPY 1047
            N+P K+E +V VELS +Q +YY+ +LT+NY+ L   G G A  S++NI+M L+K CNHPY
Sbjct: 1010 NMPTKSEFIVRVELSPLQKKYYKYILTRNYEALNPKGGGGA-CSLINIMMDLKKCCNHPY 1068

Query: 1048 LIPGTEPDS-----GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDI 1102
            L      ++     G+ E   +   KA+ KL LL  ML++L  +GHRVLIFSQMTK+LDI
Sbjct: 1069 LFAAAAEEAQLGPGGNYEL--QSLTKAAGKLVLLEKMLRLLKSQGHRVLIFSQMTKMLDI 1126

Query: 1103 LEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATAD 1161
            LED+L    G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGINLATAD
Sbjct: 1127 LEDFLE-GLGYK-YERIDGGITGSIRQEAIDRFNAPGAPQFCFLLSTRAGGLGINLATAD 1184

Query: 1162 TVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            TVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V R SVEER+ Q+AK+K+ML  L V
Sbjct: 1185 TVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1244

Query: 1222 -------NKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
                     + +++E++DILR+GTEELF +    +GKD        EEA+          
Sbjct: 1245 RPGMGGKGTNFTKQELDDILRFGTEELFKE----DGKD--------EEAIH--------- 1283

Query: 1275 GGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
                                +D+ A+A LLDRSN
Sbjct: 1284 --------------------YDDKAVAELLDRSN 1297



 Score = 75.1 bits (183), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 33/43 (76%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP  YH  CL+PPL  IP+G+W+CP+C+
Sbjct: 474 CRVCKDGGELLCCDNCPSAYHTFCLNPPLDDIPDGEWRCPRCS 516



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CP+ YHL CLDP L+  P GKW CP C
Sbjct: 416 CEVCQQGGEIILCDTCPKAYHLVCLDPELEDTPEGKWSCPTC 457


>gi|378729701|gb|EHY56160.1| chromodomain-helicase-DNA-binding protein 1 [Exophiala dermatitidis
            NIH/UT8656]
          Length = 1563

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 288/680 (42%), Positives = 392/680 (57%), Gaps = 71/680 (10%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVINICD---------ERW 661
            YEFL+KW  K+  H +W   ES   V + R+LENY  K     I I +         E+W
Sbjct: 300  YEFLIKWQQKAYYHATWETLESLAGVKSLRRLENYIKKTLQEDIRIRNDPNVAPEDKEKW 359

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                          K  +RVI  R  +DGT E +VKW GL YD  TWE       E   H
Sbjct: 360  ILDREQYLDALEEHKNVERVIGARDGEDGT-EYYVKWKGLSYDNATWE-ASSLVSEIAQH 417

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D ++    Q  K + SE           +S    + EQP  ++ G L   Q+  +N+L
Sbjct: 418  EIDRYINRSHQDFKSNTSE------SNPSTRSAFQPMREQPSYIQNGTLRDFQMTGVNFL 471

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K KNV+LADEMGLGKTV   AF+S L      + P LV+VPLSTMP W   F +W
Sbjct: 472  AYNWVKGKNVVLADEMGLGKTVQTVAFLSWLRHNRGQQGPFLVVVPLSTMPAWADTFDMW 531

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            AP++N V Y+G   +R IIR YE     PD         +F+VLLTTYE +L D+S L  
Sbjct: 532  APDINYVIYNGNQNSRNIIRDYELL---PDG---NVRHPRFHVLLTTYEYVLHDASFLNQ 585

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ + VDE HRLKN  S+L+  L  F    R+L+TGTP+QNN+GE+  L +FL P   
Sbjct: 586  IKWQFMAVDEAHRLKNRDSQLYDRLREFKAPARLLITGTPVQNNLGELSALFDFLNPG-- 643

Query: 948  PSLSSFEEKFNDLTTTQ---KVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              + + +E   DLTT +   K+ +L + + P+MLRR K+   +++PPKTE+++ VELS I
Sbjct: 644  --VVNIDENM-DLTTEEASAKIAQLTEDIKPYMLRRTKQKVEKDLPPKTEKIIRVELSDI 700

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE----PDSGSVE 1060
            Q EYY+ +LTKNY  L    KG  +QS+LNI+M+L+K  NHP++ P  E    P+    +
Sbjct: 701  QLEYYKNILTKNYAALNQGAKG-QKQSLLNIMMELKKASNHPFMFPSAEERLVPEGARRD 759

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             +    + +S K+ LL  +L  L ++GHRVLIFSQM K+LDIL DY+  E+    Y+R+D
Sbjct: 760  EVLRALVTSSGKMMLLDQLLTKLKRDGHRVLIFSQMVKMLDILGDYM--EYRGHAYQRLD 817

Query: 1121 GSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++   R+ AI  FN  D + F FLLSTR+ GLGINL TADTVII+DSD+NP AD+QAM
Sbjct: 818  GTIAAAPRRIAIDHFNAPDSNDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAM 877

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQL-----------------FVN 1222
             RAHRIGQ K + VYRLV + +VEE IL+ A+ KLML+ L                  V 
Sbjct: 878  ARAHRIGQQKPVSVYRLVSKETVEEEILERARNKLMLEFLTIQRGVTDEKAQARRNAMVG 937

Query: 1223 KSGSQKEVEDILRWGTEELF 1242
            + GS  E+  IL+   +++F
Sbjct: 938  EPGSSSEISRILKKRGQKMF 957


>gi|340914635|gb|EGS17976.1| hypothetical protein CTHT_0059890 [Chaetomium thermophilum var.
            thermophilum DSM 1495]
          Length = 1722

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 285/656 (43%), Positives = 397/656 (60%), Gaps = 65/656 (9%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY----------GTTVINICDER 660
            +E+ +KW GKS++HN+W   ES       R+LENY  K           G  +     E+
Sbjct: 313  FEYFIKWQGKSHLHNTWETTESVAGFRGFRRLENYFKKVVEYELDLQFGGDEITPEQREQ 372

Query: 661  W--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYS 706
            W               + +R++++R   DG  + FVKW GL YDECTWE  D   ++  S
Sbjct: 373  WMLDREREEEALEDYTKVERIVAVRDGDDGL-QYFVKWKGLQYDECTWE--DASLIQ--S 427

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQ-QSEIVALTEQPEELKGGALFPHQLEALN 765
               D   QF  ++ +   S+    R + + + ++ ++ L +QP+ +KGG L   Q++ LN
Sbjct: 428  QAQDKIDQFYDRSTRSWQSD----RKQSNPETRTRMMKLEKQPDYIKGGELREFQMKGLN 483

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            +L   W +  NVILADEMGLGKTV   +F+S L  +   + P LV+ PLS +P W   F 
Sbjct: 484  FLALNWTRGNNVILADEMGLGKTVQTVSFLSWLRNDRGQEGPFLVVAPLSVIPAWCDTFN 543

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             WAP+LN V Y G   AR+IIRQYE      D   KKT   KFNVLLT+Y+ ILAD+ HL
Sbjct: 544  NWAPDLNYVVYLGPESARSIIRQYELFI---DGNPKKT---KFNVLLTSYDYILADADHL 597

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
            + + W+VL VDE HRLKN  S+L+  LNSF    +VL+TGTP+QNN+ E+  LL+FL P 
Sbjct: 598  KPIKWQVLAVDEAHRLKNRESQLYIKLNSFGIPCKVLITGTPIQNNLAELSALLDFLNPG 657

Query: 946  ------SFPSLSSFEEK---------FNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
                     +LSS + K              T +K+ EL + +AP++LRR K+    ++P
Sbjct: 658  KVLIDDELEALSSADNKGTGDAEQDEARRQRTQEKLRELHQAIAPYILRRTKETVESDLP 717

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 1050
            PKTE+++ VELS IQ EYY+ +LT+NY  LR+      +QS+LNI+M+L+K+ NHPY+  
Sbjct: 718  PKTEKIIRVELSDIQLEYYKNILTRNYAALRDASG--HKQSLLNIMMELKKISNHPYMFQ 775

Query: 1051 GTEPD--SGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDY 1106
            G E    +GS     +++  I +S K+ LL  +L  L ++GHRVLIFSQM K+LDIL DY
Sbjct: 776  GAEERVLNGSTRREDQIKGLITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDY 835

Query: 1107 LNIEFGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVII 1165
            L I      ++R+DG++  G R+ AI  FN +D   F FLLSTR+ GLGINL TADTVII
Sbjct: 836  LRIRG--YQFQRLDGTIPAGPRRMAIQHFNAEDSEDFCFLLSTRAGGLGINLMTADTVII 893

Query: 1166 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            YDSD+NP AD+QAM RAHRIGQ K + VYRLV + ++EE ++  A+ KL L+ L +
Sbjct: 894  YDSDWNPQADLQAMARAHRIGQKKPVNVYRLVSKQTIEEEVVTRARNKLFLEYLTI 949


>gi|452848207|gb|EME50139.1| hypothetical protein DOTSEDRAFT_68860 [Dothistroma septosporum NZE10]
          Length = 1602

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 288/679 (42%), Positives = 397/679 (58%), Gaps = 69/679 (10%)

Query: 593  RVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKYGT 651
            R++E AV  S   K     YEF +KW G+++ H +W P ++L      R+LENY  K   
Sbjct: 275  RLKEDAVESSNAEKH---DYEFYIKWQGQAHYHATWHPWAELSSYKGFRRLENYFRKIVK 331

Query: 652  TVINICD---------ERW--------------KQPQRVISLRSSKDGTREAFVKWTGLP 688
              +++           ERW              KQ +RVI  R  ++G  E FVKW GL 
Sbjct: 332  AELSLTHDPDAAIEDRERWNLDREAYLDSLNDYKQIERVIGARDGEEGA-EYFVKWKGLF 390

Query: 689  YDECTWEKLDEPALEKYSHLTDLFVQFERQT-----LKKDASEDELPRGKGDCQ-QSEIV 742
            YD CTWE             T+  V  E QT     L + A      R + +   ++   
Sbjct: 391  YDSCTWE-------------TEALVSHEAQTEIDRYLDRSAKLPVSDRNESNPNTRAAYK 437

Query: 743  ALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEF 802
                QP  +KGG L   Q+  LN+L   W K  NVILADEMGLGKTV  CAFI+ L  + 
Sbjct: 438  PFRSQPNYIKGGELREFQIHGLNFLAHHWCKGNNVILADEMGLGKTVQTCAFINWLRHDR 497

Query: 803  KAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKK 862
            + + P +V+VPLSTMP W   F  W P++N V Y+G   AR IIR+YE      D   KK
Sbjct: 498  RQQGPFIVVVPLSTMPAWADTFNNWTPDVNYVVYNGNEAARKIIREYELLV---DGNPKK 554

Query: 863  TSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVL 922
                KFNVLLTTYE ILAD++ L  + W+ + VDE HRLKN  S+L++ L  F+   R+L
Sbjct: 555  V---KFNVLLTTYEYILADATFLSQLKWQFMAVDEAHRLKNRESQLYAKLLDFNAPSRLL 611

Query: 923  LTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTT---TQKVEELKKLVAPHMLR 979
            +TGTP+QN +GE+  L++FL P         EE   DLT+   ++K+ EL   ++P+M+R
Sbjct: 612  ITGTPMQNTLGELSALMDFLMPGKI----HVEENI-DLTSEHASRKLAELTDAISPYMIR 666

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            R K+    ++PPKTE+++ VELS +Q EYY+ +LT+NY  L N G    + S+LNI+M+L
Sbjct: 667  RTKQKVENDLPPKTEKIIRVELSDVQLEYYKNILTRNYAAL-NAGAKAGKTSLLNIMMEL 725

Query: 1040 RKVCNHPYLIPGTE----PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQ 1095
            +K  NHP++    E      S S E L +  I +S KL LL  +L  + K+GHRVLIFSQ
Sbjct: 726  KKASNHPFMFQNAEERLLAGSESREDLLKAMITSSGKLMLLDQLLTKMKKDGHRVLIFSQ 785

Query: 1096 MTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLG 1154
            M K+LDIL DYL +      ++R+DG+++ G R+ AI  FN  D   F FLLSTR+ GLG
Sbjct: 786  MVKMLDILGDYLALR--GHQFQRLDGTIAAGPRRMAIDHFNAPDSQDFTFLLSTRAGGLG 843

Query: 1155 INLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKL 1214
            INL TADTVI++DSD+NP AD+QAM RAHRIGQ K + +YR V + +VEE +L+ A+ KL
Sbjct: 844  INLMTADTVILFDSDWNPQADLQAMARAHRIGQKKPVTIYRFVSKDTVEEEVLERARNKL 903

Query: 1215 MLDQLFVNKSGSQKEVEDI 1233
            ML+ + + +  + K+  D+
Sbjct: 904  MLEFITIQRGVTDKDARDL 922


>gi|66809969|ref|XP_638708.1| chromo  domain-containing protein [Dictyostelium discoideum AX4]
 gi|60467321|gb|EAL65353.1| chromo  domain-containing protein [Dictyostelium discoideum AX4]
          Length = 1917

 Score =  498 bits (1282), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 304/725 (41%), Positives = 417/725 (57%), Gaps = 95/725 (13%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENY-------------KAKYGTTVINIC 657
            YEFLVKW G + IHN+W   ES       +KL+NY              +K      +I 
Sbjct: 560  YEFLVKWKGWAYIHNTWDAYESLNNFKGNKKLQNYVKGILDNIQWRQEASKEDIEQADIT 619

Query: 658  DERWKQP-------QRVISLR---SSKD-------------------------------G 676
             E  KQ        +RVI+ R    S+D                                
Sbjct: 620  KELMKQEIQDYTIVERVIAQREVAQSRDQIVNSTTAIDPSTGESTTTTTTTTASSSEYKS 679

Query: 677  TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDC 736
              +  VKW  L Y E TWE  ++ A  ++    D F+   +Q  +    +      K   
Sbjct: 680  NIQYLVKWKVLAYSEVTWEYPEDIA--EFQTEIDTFL-IRQQNNQNAPMKANTISAKKRL 736

Query: 737  QQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFIS 796
             Q     L  QP  +  G L  +Q+E LNWL   W  + NVILADEMGLGKT+   +F+S
Sbjct: 737  DQG-FTKLDTQPSWISAGTLRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLS 795

Query: 797  SLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDP 856
             L+ E   K P LV+VPLST+ NW  EFA WAP +NV+ Y G  ++R IIR YE++ ++ 
Sbjct: 796  YLFNEQDIKGPFLVVVPLSTIENWQREFAKWAPAMNVIVYTGTGQSRDIIRLYEFYTTN- 854

Query: 857  DNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFS 916
              L KK     FNVLLTTY+ IL D + L  + WE L VDE HRLKNS S L  +L  ++
Sbjct: 855  -RLGKK--KLNFNVLLTTYDFILKDKNTLGTIKWEFLAVDEAHRLKNSESVLHEVLKLYN 911

Query: 917  FQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPH 976
              +R+L+TGTPLQN++ E++NLLNFL P  F SL  F+++++DL    ++ +L  ++ PH
Sbjct: 912  TTNRLLVTGTPLQNSLKELWNLLNFLMPNKFTSLKDFQDQYSDLKENDQIAQLHSVLKPH 971

Query: 977  MLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIV 1036
            +LRR+KKD  +++PPKTER++ V+LS++Q +YY+ +LTKN+Q L N GKG  + ++LNI+
Sbjct: 972  LLRRIKKDVEKSLPPKTERILRVDLSNVQKKYYKWILTKNFQEL-NKGKG-EKTTLLNIM 1029

Query: 1037 MQLRKVCNHPYLIPGT--EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFS 1094
             +L+K CNHPYL      E + G+ + L  M I+AS KL LL  +L  L + GHRVLIFS
Sbjct: 1030 TELKKTCNHPYLYQNARDECELGAKDLLDSM-IRASGKLVLLDKLLIRLKETGHRVLIFS 1088

Query: 1095 QMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGL 1153
            QM ++LDIL DYL  +     ++R+DGS+S   R  A+ RFN  D   F FLLST++ GL
Sbjct: 1089 QMVRMLDILADYL--KGRSFQFQRLDGSMSREKRSQAMDRFNAVDSPDFCFLLSTKAGGL 1146

Query: 1154 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKK 1213
            GINL+TADTVII+DSD+NP  D+QA  RAHRIGQ   + +YRLV ++SVEE IL+ AK+K
Sbjct: 1147 GINLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKNHVNIYRLVSKSSVEEDILERAKQK 1206

Query: 1214 LMLDQLFVN---KSGSQK-------------EVEDILRWGTEELFNDSPGINGKDMGENN 1257
            ++LD L +    KS + K             E+E IL++G EELF        K+ GE  
Sbjct: 1207 MVLDHLVIQTMEKSQTAKSNTPNNSNVFNKEELEAILKFGAEELF--------KETGEEA 1258

Query: 1258 TSIEE 1262
              IEE
Sbjct: 1259 NPIEE 1263


>gi|367043642|ref|XP_003652201.1| CHD1-like protein [Thielavia terrestris NRRL 8126]
 gi|346999463|gb|AEO65865.1| CHD1-like protein [Thielavia terrestris NRRL 8126]
          Length = 1675

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 286/656 (43%), Positives = 396/656 (60%), Gaps = 64/656 (9%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAK---------YGTTVIN------ 655
            +E+ +KW GKS++HN+W   E+       R+LENY  K         +G   I+      
Sbjct: 294  FEYYIKWQGKSHLHNTWETTETVAGFRGFRRLENYYKKTVEYELDLKFGGDEISPEQREQ 353

Query: 656  -ICD--------ERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYS 706
             + D        E + + +R++++R  ++G +E FVKW GL YD+CTWE   + +L + S
Sbjct: 354  WLLDREREEEALEDYTKVERIVAVRDGEEG-QEYFVKWKGLQYDDCTWE---DASLIR-S 408

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQ-QSEIVALTEQPEELKGGALFPHQLEALN 765
            H  D   QF    L + +   +  R + + + +S +  L +QP  +KGG L   Q+  LN
Sbjct: 409  HAQDKIDQF----LDRSSRSWQSDRKQTNLETRSRMTKLEKQPPYIKGGELREFQMRGLN 464

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            +L   W +  NVILADEMGLGKTV   +F+S L  +   + P LV+ PLS +P W   F 
Sbjct: 465  FLALNWTRGNNVILADEMGLGKTVQTVSFLSWLRNDRGQEGPFLVVAPLSVIPAWCDTFN 524

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             WAP+LN V Y G   AR+ IRQYE      D   KKT   KFNVLLT+Y+ ILAD  HL
Sbjct: 525  HWAPDLNYVVYLGPEAARSNIRQYELFI---DGNPKKT---KFNVLLTSYDYILADVDHL 578

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
            +G+ W+VL VDE HRLKN  S+L+  LNSF    +VL+TGTP+QNN+ E+  LL+FL P 
Sbjct: 579  KGIKWQVLAVDEAHRLKNRESQLYVKLNSFGVPCKVLITGTPIQNNLAELSALLDFLNPG 638

Query: 946  ------SFPSLSSFEEK---------FNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
                      LS+ + K            L T +K+ EL   +AP +LRR K+    ++P
Sbjct: 639  KVLIDEELELLSTADNKEVTDEQQDEAKRLKTQEKLRELHNSIAPFILRRTKETVESDLP 698

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 1050
            PKTE+++ VELS +Q EYY+ +LT+NY  L +   G  +QS+LNI+M+L+KV NHPY+  
Sbjct: 699  PKTEKIIRVELSDVQLEYYKNILTRNYAALSDASNG-HKQSLLNIMMELKKVSNHPYMFQ 757

Query: 1051 GTEPD--SGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDY 1106
            G E     GS     +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL DY
Sbjct: 758  GAEERVLGGSTRREDQIKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVKMLDILGDY 817

Query: 1107 LNIEFGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVII 1165
            L +      ++R+DG++  G R+ AI  FN +D   F FLLSTR+ GLGINL TADTVII
Sbjct: 818  LRVR--GYQFQRLDGTIPAGPRRMAINHFNAEDSDDFCFLLSTRAGGLGINLMTADTVII 875

Query: 1166 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            YDSD+NP AD+QAM RAHRIGQ K + VYRLV + ++EE ++  A+ KL L+ L +
Sbjct: 876  YDSDWNPQADLQAMARAHRIGQKKPVNVYRLVAKQTIEEEVVTRARNKLFLEYLTI 931


>gi|452822657|gb|EME29674.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria sulphuraria]
          Length = 2042

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 277/672 (41%), Positives = 391/672 (58%), Gaps = 58/672 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVIN------------ICD 658
            ++L+KW  +S IH  W+ E  +  +   K +L+ ++  +                  I +
Sbjct: 279  QYLIKWKNRSYIHCDWVTEDFILSQPQGKGRLQRFRKNFEMNAWKRGDDDLRDDADPIPE 338

Query: 659  E--RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFE 716
            E  +W    R+++   + DG +E  VKW  LPY E TWE  D+  +  YS + + + + +
Sbjct: 339  EWSKWTTVDRILAEHLADDGVKEFLVKWCALPYSESTWETEDD--IRDYSKIQEFYQRNK 396

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKN 776
            + +L       +L RG    ++      T Q     GG L  +Q+E L WL  CW K + 
Sbjct: 397  KPSL-------DLLRGSTKIRKPSNFDYT-QVSFKNGGYLREYQMEGLKWLVSCWCKYQG 448

Query: 777  VILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
             ILADEMGLGKT+   AF+  LY   + + P L++ PLST+ +W  EF  W  ++NVV Y
Sbjct: 449  SILADEMGLGKTLQTVAFLQYLYIRERIRGPFLIIAPLSTVEHWKREFESWT-DMNVVVY 507

Query: 837  HGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVD 896
            HG +++R+II QYEW  SD    N K   YKF  ++TTYE I+ D   LR + WEV+VVD
Sbjct: 508  HGNSESRSIIHQYEWGFSD----NPKGPPYKFVAIVTTYESIILDPGKLRSIEWEVMVVD 563

Query: 897  EGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEK 956
            E HRLKN  +KL   L +FS +HR+LLTGTP+QN+  E++ LLNFL+P+ F   SSF  K
Sbjct: 564  EAHRLKNRQAKLVEELRAFSTKHRILLTGTPIQNSSAEVWALLNFLEPSKFSDESSFLSK 623

Query: 957  FNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKN 1016
            F +++ ++  E+ ++++ P+MLRR K+D  ++IPPK E ++ VEL+  Q ++YRA L +N
Sbjct: 624  FAEISDSETAEKFREMLRPYMLRRQKEDVEKSIPPKEETIISVELTRTQKKWYRATLEQN 683

Query: 1017 YQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP------DSGSVEFLHEMRIKAS 1070
            +  L    K     ++ NI M+LRK CNHPYLI G E        S   E L +  I+AS
Sbjct: 684  FSFLEKGAKSSNVGNLHNIFMELRKCCNHPYLIKGVEIIETQHLRSTDDESLMQHLIEAS 743

Query: 1071 AKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI-EFGPKTYERVDGSVSVGDRQ 1129
             KL L+  +L  L + GH+VLIFSQM ++LDILEDYL+   +G   YER+DG V   DRQ
Sbjct: 744  GKLVLVDKLLPKLRESGHKVLIFSQMIRVLDILEDYLSWRRWG---YERIDGRVRGIDRQ 800

Query: 1130 AAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 1188
             AI RF N    +FVFLL TR+ G GINL  ADTVII+DSD+NP  DIQA  R HRIGQ 
Sbjct: 801  QAIDRFCNPASDKFVFLLCTRAGGQGINLTAADTVIIFDSDWNPQNDIQAQARCHRIGQE 860

Query: 1189 KRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG----------------SQKEVED 1232
            K + VYRLV R + EE + + A KKL LDQ  +   G                 ++E++ 
Sbjct: 861  KDVKVYRLVTRGTYEEDMFERASKKLGLDQAILQDMGFEEANKKKEKDSVADIKKEEIDR 920

Query: 1233 ILRWGTEELFND 1244
            +L+ G   + ND
Sbjct: 921  LLKKGAYAVLND 932


>gi|170592228|ref|XP_001900871.1| CHD4 protein [Brugia malayi]
 gi|158591738|gb|EDP30342.1| CHD4 protein, putative [Brugia malayi]
          Length = 1846

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 294/697 (42%), Positives = 398/697 (57%), Gaps = 90/697 (12%)

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTL 720
            W Q QR+I+         +  VKW  L Y++ TWE+ D+  +  Y    D  +++   T 
Sbjct: 503  WMQVQRIINHVQYGKTQFDYLVKWRELVYEQATWER-DDFDIMGYD---DAIIKY--WTH 556

Query: 721  KKDASEDELPRGKGDCQQSEIVALTE----------------------------QPEELK 752
            ++  + D LP+       ++ V   +                            QP+ + 
Sbjct: 557  RQRMNGDVLPKHIAKKLAAKKVEEGKDKDDEEEEDCKKKKKKEPKTDLRKKYETQPDFIT 616

Query: 753  --GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLV 810
              GG L  +QLE +NWLR CW +  + ILADEMGLGKT+ +  F+ SL  E   + P LV
Sbjct: 617  ETGGKLHDYQLEGINWLRHCWSQGTDAILADEMGLGKTIQSMVFLYSLVKEGHTRGPFLV 676

Query: 811  LVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWH--------ASDPDNLNKK 862
              PLST+ NW  E   W P+  VV Y G   +R +IR++E+            P  L K 
Sbjct: 677  AAPLSTLINWEREAEFWCPDFYVVTYVGDKDSRTVIREHEFSFIEGAVRGGPKPSRL-KT 735

Query: 863  TSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVL 922
                KF+VLLT+YE+I  D S L  + W  LVVDE HRLKN+ S  F  L  F   +R+L
Sbjct: 736  DQGIKFHVLLTSYELINIDKSILSSIEWAGLVVDEAHRLKNNQSLFFRTLRDFRINYRLL 795

Query: 923  LTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLK 982
            LTGTPLQNN+ E+++LLNFL P  F  + SF  +F +++   ++++L  L+ PHMLRRLK
Sbjct: 796  LTGTPLQNNLEELFHLLNFLSPDRFYDMDSFTHEFAEISKEDQIQKLHSLLGPHMLRRLK 855

Query: 983  KDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKV 1042
             D +  +P K+E +V VELS +Q +YY+ +LT+N++ L   G G +Q S++NI+M L+K 
Sbjct: 856  ADVLSGMPSKSELIVRVELSPMQKKYYKNILTRNFEALSPKGGG-SQISLINIIMDLKKC 914

Query: 1043 CNHPYLIPGTE---PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKL 1099
            CNHPYL P      P   S  +     +KAS K  LL  MLK L ++GHRVLIFSQMTK+
Sbjct: 915  CNHPYLFPKASIEAPKLKSGIYEGTALVKASGKFVLLQKMLKKLKEQGHRVLIFSQMTKM 974

Query: 1100 LDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLA 1158
            LDI+ED+   E G K YER+DGS++   RQ AI RFN  +  +FVFLLSTR+ GLGINLA
Sbjct: 975  LDIMEDFCENE-GYK-YERIDGSITGQARQDAIDRFNAANAQQFVFLLSTRAGGLGINLA 1032

Query: 1159 TADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ 1218
            TADTVIIYDSD+NPH DIQA +RAHRIGQ K++L+YR V R SVEERI  +AKKK++L  
Sbjct: 1033 TADTVIIYDSDWNPHNDIQAFSRAHRIGQQKKVLIYRFVTRNSVEERITSVAKKKMLLTH 1092

Query: 1219 LFVNKSGSQK-------EVEDILRWGTEELFNDSPGINGK-DMGENNTSIEEAVRDLEQK 1270
            L V     QK       E++++LRWGTEELF +      + + GE  TS +E        
Sbjct: 1093 LVVRAGIGQKGPSMSKSELDEVLRWGTEELFKEDETTTAEGEQGEKKTSEQE-------- 1144

Query: 1271 HRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRS 1307
                                  I+WD+ A+  LLDRS
Sbjct: 1145 ----------------------IIWDDEAVDALLDRS 1159



 Score = 70.5 bits (171), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 28/42 (66%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C  C  GG LLCCD+CP +YH  CL+P L  IP G W CP+C
Sbjct: 322 CRTCKEGGWLLCCDTCPSSYHAYCLNPSLTEIPEGDWSCPRC 363



 Score = 68.6 bits (166), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CP+ YHL CLDP ++  P G+W CP C
Sbjct: 259 CEVCQQGGEIILCDTCPKAYHLVCLDPDMEEPPEGRWSCPTC 300


>gi|312077956|ref|XP_003141528.1| CHromoDomain protein family member [Loa loa]
          Length = 1696

 Score =  491 bits (1265), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 294/691 (42%), Positives = 401/691 (58%), Gaps = 78/691 (11%)

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD------EPALEKY-SHLTDLFV 713
            W Q QR+I+         +  VKW  L Y++ TWE+ D      E A+ KY +H   +  
Sbjct: 358  WMQVQRIINHVQYGKTQFDYLVKWRELVYEQATWERDDFDIMGYEDAIIKYWAHRQRMNG 417

Query: 714  QFERQTLKKDASEDELPRGKGDCQQSEIVALTE---------------QPEELK--GGAL 756
                + + K  +  ++  GK    + E     +               QP+ +   GG L
Sbjct: 418  DILPKHIAKKLAAKKVEEGKDKDDEEEEECKKKKKKEPKTDLRKKYETQPDFITETGGKL 477

Query: 757  FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLST 816
              +QLE +NWLR CW +  + ILADEMGLGKT+ +  F+ SL  E   + P LV  PLST
Sbjct: 478  HDYQLEGINWLRHCWSQGTDAILADEMGLGKTIQSMVFLYSLVKEGHTRGPFLVAAPLST 537

Query: 817  MPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWH--------ASDPDNLNKKTSSYKF 868
            + NW  E   W P+  VV Y G   +R +IR++E+            P  L K     KF
Sbjct: 538  LINWEREAEFWCPDFYVVTYVGDKDSRTVIREHEFSFIEGAVRGGPKPSRL-KTDQGIKF 596

Query: 869  NVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPL 928
            +VLLT+YE+I  D S L  + W  LVVDE HRLKN+ S  F  L  F   +R+LLTGTPL
Sbjct: 597  HVLLTSYELINIDKSILSSIEWAGLVVDEAHRLKNNQSLFFRTLRDFRINYRLLLTGTPL 656

Query: 929  QNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQN 988
            QNN+ E+++LLNFL P  F  + SF  +F +++   ++++L  L+ PHMLRRLK D +  
Sbjct: 657  QNNLEELFHLLNFLSPDRFYDMDSFTHEFAEISKEDQIQKLHSLLGPHMLRRLKADVLSG 716

Query: 989  IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYL 1048
            +P K+E +V VELS +Q +YY+ +LT+N++ L   G G +Q S++NI+M L+K CNHPYL
Sbjct: 717  MPSKSELIVRVELSPMQKKYYKNILTRNFEALSPKGGG-SQISLINIIMDLKKCCNHPYL 775

Query: 1049 IPGTEPDSGSVE---FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILED 1105
             P    ++  ++   +     +KAS K  LL  MLK L ++GHRVLIFSQMTK+LDI+ED
Sbjct: 776  FPKASIEAPKLKNGIYEGTALVKASGKFVLLQKMLKKLKEQGHRVLIFSQMTKMLDIMED 835

Query: 1106 YLNIEFGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVI 1164
            +   E G K YER+DGS++   RQ AI RFN  +  +FVFLLSTR+ GLGINLATADTVI
Sbjct: 836  FCENE-GYK-YERIDGSITGQARQDAIDRFNAANAQQFVFLLSTRAGGLGINLATADTVI 893

Query: 1165 IYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKS 1224
            IYDSD+NPH DIQA +RAHRIGQ K++L+YR V R SVEERI  +AKKK++L  L V   
Sbjct: 894  IYDSDWNPHNDIQAFSRAHRIGQQKKVLIYRFVTRNSVEERITSVAKKKMLLTHLVVRAG 953

Query: 1225 GSQK-------EVEDILRWGTEELFNDSPGINGK-DMGENNTSIEEAVRDLEQKHRKRGG 1276
              QK       E++++LRWGTEELF +   +  + + GE  TS +E              
Sbjct: 954  IGQKGPSMSKSELDEVLRWGTEELFKEDETMAAEGEQGEKKTSEQE-------------- 999

Query: 1277 GLGDVYQDKCTEGSTKIVWDENAIARLLDRS 1307
                            I+WD+ A+  LLDRS
Sbjct: 1000 ----------------IIWDDEAVDALLDRS 1014



 Score = 70.1 bits (170), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 28/42 (66%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C  C  GG LLCCD+CP +YH  CL+P L  IP G W CP+C
Sbjct: 177 CRTCKEGGWLLCCDTCPSSYHAYCLNPSLTEIPEGDWSCPRC 218



 Score = 67.4 bits (163), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CP+ YH+ CLDP ++  P G+W CP C
Sbjct: 114 CEVCQQGGEIILCDTCPKAYHMVCLDPDMEEPPEGRWSCPTC 155


>gi|393911013|gb|EJD76123.1| LET-418 protein [Loa loa]
          Length = 1755

 Score =  491 bits (1264), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 294/691 (42%), Positives = 401/691 (58%), Gaps = 78/691 (11%)

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD------EPALEKY-SHLTDLFV 713
            W Q QR+I+         +  VKW  L Y++ TWE+ D      E A+ KY +H   +  
Sbjct: 417  WMQVQRIINHVQYGKTQFDYLVKWRELVYEQATWERDDFDIMGYEDAIIKYWAHRQRMNG 476

Query: 714  QFERQTLKKDASEDELPRGKGDCQQSEIVALTE---------------QPEELK--GGAL 756
                + + K  +  ++  GK    + E     +               QP+ +   GG L
Sbjct: 477  DILPKHIAKKLAAKKVEEGKDKDDEEEEECKKKKKKEPKTDLRKKYETQPDFITETGGKL 536

Query: 757  FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLST 816
              +QLE +NWLR CW +  + ILADEMGLGKT+ +  F+ SL  E   + P LV  PLST
Sbjct: 537  HDYQLEGINWLRHCWSQGTDAILADEMGLGKTIQSMVFLYSLVKEGHTRGPFLVAAPLST 596

Query: 817  MPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWH--------ASDPDNLNKKTSSYKF 868
            + NW  E   W P+  VV Y G   +R +IR++E+            P  L K     KF
Sbjct: 597  LINWEREAEFWCPDFYVVTYVGDKDSRTVIREHEFSFIEGAVRGGPKPSRL-KTDQGIKF 655

Query: 869  NVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPL 928
            +VLLT+YE+I  D S L  + W  LVVDE HRLKN+ S  F  L  F   +R+LLTGTPL
Sbjct: 656  HVLLTSYELINIDKSILSSIEWAGLVVDEAHRLKNNQSLFFRTLRDFRINYRLLLTGTPL 715

Query: 929  QNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQN 988
            QNN+ E+++LLNFL P  F  + SF  +F +++   ++++L  L+ PHMLRRLK D +  
Sbjct: 716  QNNLEELFHLLNFLSPDRFYDMDSFTHEFAEISKEDQIQKLHSLLGPHMLRRLKADVLSG 775

Query: 989  IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYL 1048
            +P K+E +V VELS +Q +YY+ +LT+N++ L   G G +Q S++NI+M L+K CNHPYL
Sbjct: 776  MPSKSELIVRVELSPMQKKYYKNILTRNFEALSPKGGG-SQISLINIIMDLKKCCNHPYL 834

Query: 1049 IPGTEPDSGSVE---FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILED 1105
             P    ++  ++   +     +KAS K  LL  MLK L ++GHRVLIFSQMTK+LDI+ED
Sbjct: 835  FPKASIEAPKLKNGIYEGTALVKASGKFVLLQKMLKKLKEQGHRVLIFSQMTKMLDIMED 894

Query: 1106 YLNIEFGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVI 1164
            +   E G K YER+DGS++   RQ AI RFN  +  +FVFLLSTR+ GLGINLATADTVI
Sbjct: 895  FCENE-GYK-YERIDGSITGQARQDAIDRFNAANAQQFVFLLSTRAGGLGINLATADTVI 952

Query: 1165 IYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKS 1224
            IYDSD+NPH DIQA +RAHRIGQ K++L+YR V R SVEERI  +AKKK++L  L V   
Sbjct: 953  IYDSDWNPHNDIQAFSRAHRIGQQKKVLIYRFVTRNSVEERITSVAKKKMLLTHLVVRAG 1012

Query: 1225 GSQK-------EVEDILRWGTEELFNDSPGINGK-DMGENNTSIEEAVRDLEQKHRKRGG 1276
              QK       E++++LRWGTEELF +   +  + + GE  TS +E              
Sbjct: 1013 IGQKGPSMSKSELDEVLRWGTEELFKEDETMAAEGEQGEKKTSEQE-------------- 1058

Query: 1277 GLGDVYQDKCTEGSTKIVWDENAIARLLDRS 1307
                            I+WD+ A+  LLDRS
Sbjct: 1059 ----------------IIWDDEAVDALLDRS 1073



 Score = 70.1 bits (170), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 28/42 (66%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C  C  GG LLCCD+CP +YH  CL+P L  IP G W CP+C
Sbjct: 236 CRTCKEGGWLLCCDTCPSSYHAYCLNPSLTEIPEGDWSCPRC 277



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CP+ YH+ CLDP ++  P G+W CP C
Sbjct: 173 CEVCQQGGEIILCDTCPKAYHMVCLDPDMEEPPEGRWSCPTC 214


>gi|449683391|ref|XP_002153791.2| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Hydra
            magnipapillata]
          Length = 1699

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 313/780 (40%), Positives = 452/780 (57%), Gaps = 119/780 (15%)

Query: 639  KRKLENYKAKYGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD 698
            KR L+    +YG          W Q  R++  +  K    +  VKW  L Y+  TWE  D
Sbjct: 374  KRNLDGRFFQYGIK------PEWLQIHRILWHKEVKKKI-QYLVKWRELGYEMSTWEFKD 426

Query: 699  EPA------LEKYSHL-TDLFVQFERQTLKKDASEDELPRGKGDCQ-QSEIVALTEQPEE 750
            +         +KY  +  +L  Q++++  KKD  +    R   +   +    + T QP  
Sbjct: 427  DECNKDIDDFDKYIEIYNNLRAQYKKKLKKKDKVKSSKKREGWEYDIRPNGYSYTNQPSF 486

Query: 751  LK--GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPC 808
            +   GG L  +Q+E +NW+R  W +  N ILADEMGLGKT+    F++SL  E +++ P 
Sbjct: 487  ITDTGGILHEYQIEGINWIRYSWAQRDNTILADEMGLGKTIQTITFLNSLLSEGRSEGPF 546

Query: 809  LVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYK- 867
            L+  PLST+ NW  EF  WAPN+ VV Y G  + R +IR YE    D D++ K   +YK 
Sbjct: 547  LICAPLSTIVNWEREFEFWAPNMYVVTYSGNRENRQVIRNYE-MTFDDDSMRKGQKAYKV 605

Query: 868  -------FNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHR 920
                   F+VLLT+YE++  D++ L+ + W+VLV+DE HRLKN+ S+ F  + S++  + 
Sbjct: 606  KKDVICKFHVLLTSYELVAIDANTLQSIDWKVLVIDEAHRLKNNQSRFFRTMTSYNIDYT 665

Query: 921  VLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRR 980
            +LLTGTPLQNN+ E+++LLNFL P  F +  +F  +F D+    ++++L +++ PHMLRR
Sbjct: 666  LLLTGTPLQNNLEELFHLLNFLCPDKFQNRENFLAEFEDIAKEDQIKKLHEMLGPHMLRR 725

Query: 981  LKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLR 1040
            LK D ++++P K+E +V VELS +Q +YY+ +LTKN+  L    +G  Q S+LNIVM+L+
Sbjct: 726  LKGDVLKDMPSKSEFIVRVELSPMQKKYYKYILTKNFGALNT--RGSQQVSLLNIVMELK 783

Query: 1041 KVCNHPYLI-------PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIF 1093
            K CNHPYL        P    ++  V+ L E    AS KL LL+ MLK L ++GHRVLIF
Sbjct: 784  KCCNHPYLFSTASLEAPRYANNAYEVKGLTE----ASGKLVLLYKMLKKLKEQGHRVLIF 839

Query: 1094 SQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCG 1152
            SQMT++LD+LED++  E     YER+DG+++ G RQ+AI RFN   S  F FLLSTR+ G
Sbjct: 840  SQMTRVLDLLEDFM--EGHGWRYERLDGTITGGIRQSAIDRFNLPNSEIFSFLLSTRAGG 897

Query: 1153 LGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKK 1212
            LGINLATADTV IYDSD+NPH DIQA +RAHRIGQ  ++++YR V +++VEERI Q+AKK
Sbjct: 898  LGINLATADTVFIYDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTKSTVEERITQVAKK 957

Query: 1213 KLMLDQLFVN--------KSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            K+ML  L V         +S S++E++DIL++GTEE+F        KD G+++T      
Sbjct: 958  KMMLTHLVVRPGLGSKAAQSMSKRELDDILKFGTEEMF--------KDDGDDSTG----- 1004

Query: 1265 RDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLE-- 1322
                                       +IV+D+NAI  LLDRSN         EG +E  
Sbjct: 1005 ---------------------------RIVYDDNAINMLLDRSN---------EGIMEKE 1028

Query: 1323 ---NDMLGSVKATEWNEETTEDQAESPVAAVDDASAENSERKEENAVTGIEENEWDRLLR 1379
               +D L S K   +   T +D+ E  V  +          K+E     I+ + W++LLR
Sbjct: 1029 SGMDDYLSSFKVASY---TVKDKDEPDVEVL----------KQE--ADTIDADYWEKLLR 1073



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 30/42 (71%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C IC  GG LLCCD CP TYH++C+ P L  +P G+W+CP C
Sbjct: 230 CKICRDGGELLCCDFCPGTYHMRCVKPQLITVPEGEWKCPLC 271



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG++L CD+C   +HL CLDPPL  +P G W CPKC
Sbjct: 167 CDVCGEGGDILLCDTCTCVWHLTCLDPPLDEVPEGDWSCPKC 208


>gi|322799754|gb|EFZ20959.1| hypothetical protein SINV_16592 [Solenopsis invicta]
          Length = 529

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 262/506 (51%), Positives = 346/506 (68%), Gaps = 26/506 (5%)

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWLR  W +  + ILADEMGLGKT+    F+ SLY E   K P LV VPLST+ NW  
Sbjct: 1    GLNWLRYSWGQGIDTILADEMGLGKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWER 60

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQ----YEWHASDPDNLNK-KTSSYKFNVLLTTYEM 877
            EF  WAP+   V Y G   +R +IR+    +E  A      +K ++S  KFNVLLT+YE+
Sbjct: 61   EFETWAPDFYCVTYVGDKDSRIVIRENELSFEEGAVRSGRASKIRSSLIKFNVLLTSYEL 120

Query: 878  ILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYN 937
            I  DS+ L  + W VLVVDE HRLK++ SK F LL S++  +++LLTGTPLQNN+ E+++
Sbjct: 121  ISIDSACLGSIDWAVLVVDEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFH 180

Query: 938  LLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            LLNFL    F  L++F+ +F D++   +V++L +++ PHMLRRLK D ++N+P K+E +V
Sbjct: 181  LLNFLCRDKFNDLAAFQNEFADISKEDQVKKLHEMLGPHMLRRLKADVLKNMPSKSEFIV 240

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS- 1056
             VELS +Q +YY+ +LT+N++ L   G G  Q S+LNI+M L+K CNHPYL P    ++ 
Sbjct: 241  RVELSPMQKKYYKYILTRNFEALNPKGGG-QQVSLLNIMMDLKKCCNHPYLFPAASQEAP 299

Query: 1057 ----GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFG 1112
                GS E      IKA+ KL LL  MLK L  +GHRVLIFSQMTK+LDILEDYL  E G
Sbjct: 300  TGPNGSYE--TSALIKAAGKLVLLSKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGE-G 356

Query: 1113 PKTYERVDGSVSVGDRQAAITRFNQD----KSRFVFLLSTRSCGLGINLATADTVIIYDS 1168
             K YER+DG+++   RQ AI RFN        +FVFLLSTR+ GLGINLATADTVIIYDS
Sbjct: 357  YK-YERIDGNITGAQRQEAIDRFNAPGKYCAQQFVFLLSTRAGGLGINLATADTVIIYDS 415

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------- 1221
            D+NPH DIQA +RAHRIGQ+ ++++YR V R SVEER+ Q+AK+K+ML  L V       
Sbjct: 416  DWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGK 475

Query: 1222 NKSGSQKEVEDILRWGTEELFNDSPG 1247
              + S++E++DILR+GTEELF +  G
Sbjct: 476  GANFSKQELDDILRFGTEELFKEEEG 501


>gi|50306047|ref|XP_452985.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642118|emb|CAH01836.1| KLLA0C17578p [Kluyveromyces lactis]
          Length = 1525

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 338/941 (35%), Positives = 490/941 (52%), Gaps = 113/941 (12%)

Query: 485  GVDRIQVYRRSVTKECKVTKECKGENAIDLLREDDKDSDPVAVNGKVQDESAVSTEDL-- 542
            G  R+        ++ K  +E   EN +   R   ++++ V +N  + D+S  + EDL  
Sbjct: 95   GRKRVSAGNSKSKRQAKRVEESDEENVVLPTRFSSRNNNKV-INYTLNDDS--NDEDLME 151

Query: 543  --GERNDKMVVEDADVSLRDNEGLTVS---EIHITCESTDKDVDVGKKTSGSVAKRVQEP 597
               E+++   ++  D+ L+D    + S   E H      D  +  G   SGS   R  + 
Sbjct: 152  SSEEQDEGHNLDSEDMDLQDGYSASPSPQQETHSIDIVVDHRLKEGVDNSGSTKNRRWD- 210

Query: 598  AVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAKY----- 649
                   V     ++EFL+KW  +S++HNSW     LK       +++ENY  ++     
Sbjct: 211  -------VDSIRANFEFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQ 263

Query: 650  -----------GTTVINICDER-------WKQPQRVISLR--SSKDGTREA----FVKWT 685
                          V+++  ER       +K P+R+I      ++DG+  +     VKW 
Sbjct: 264  EVRADPYTTREDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWR 323

Query: 686  GLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDC---QQSEIV 742
             L YDECTWE     A E      +   +F+ +T  K      +P+   +    Q+ +  
Sbjct: 324  RLNYDECTWE----VASEIVKMAPEQVKEFQNRTNSKI-----MPQNSSNYPANQRPKFE 374

Query: 743  ALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEF 802
             L  QP  +KGG L   QL  +NW+   W K+ N ILADEMGLGKTV   +FIS L    
Sbjct: 375  KLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYAR 434

Query: 803  KAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKK 862
            +   P LV+VPLSTMP W   F  WAP LN V Y G   +R +I+ YE++ ++P    KK
Sbjct: 435  RQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFY-TNPQAKGKK 493

Query: 863  TSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVL 922
                KFNVLLTTYE IL D S L  + W+ L VDE HRLKN+ S L+  LNSF   +R+L
Sbjct: 494  --HLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLL 551

Query: 923  LTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLK 982
            +TGTPLQNNI E+  L+NFL P  F      + +  D    + + +L K + P +LRRLK
Sbjct: 552  ITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLK 611

Query: 983  KDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKV 1042
            KD  +++P KTER++ VELS +Q EYY+ +LTKNY  L +  KG    S+LN++ +L+K 
Sbjct: 612  KDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKG-GHVSLLNVMNELKKA 670

Query: 1043 CNHPYLIPGTEP--------DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFS 1094
             NHPYL    E            S E +    I +S K+ LL  +L  L K+GHRVLIFS
Sbjct: 671  SNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFS 730

Query: 1095 QMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGL 1153
            QM ++LDIL DYL+I+     ++R+DG+V    R+ +I  FN +D + FVFLLSTR+ GL
Sbjct: 731  QMVRILDILGDYLSIK--GINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGL 788

Query: 1154 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKK 1213
            GINL TADTVII+DSD+NP AD+QAM RAHRIGQ   ++VYR V + +VEE +L+ A+KK
Sbjct: 789  GINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKK 848

Query: 1214 LMLDQLFV-------NKSGSQK-------EVEDILRWGTEELF--NDSP----------- 1246
            ++L+   +       NK  S K       E+ +IL++G   +F  ND+            
Sbjct: 849  MILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKLEDLNLDEV 908

Query: 1247 ------GINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQD---KCTEGSTKIVWDE 1297
                   I   ++GE+N   EE +R  E    K      D+  +   K  +   +   DE
Sbjct: 909  LNHAEDHITTPELGESNLGGEEFLRQFEVTDYKADVDWDDIIPEDELKKLKDEEQRRIDE 968

Query: 1298 NAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEWNEET 1338
              +   LD  N ++ + D  +  +  +  GS    E N ++
Sbjct: 969  EYVREQLDIMNRKTAAIDKIKRSVNGETFGSDSEDEGNSKS 1009


>gi|344228405|gb|EGV60291.1| hypothetical protein CANTEDRAFT_127398 [Candida tenuis ATCC 10573]
          Length = 1383

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 295/729 (40%), Positives = 407/729 (55%), Gaps = 87/729 (11%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKYGTTV--------------- 653
            + + FL+KWVG S++HN+W   + LK     RK++NY  +Y   V               
Sbjct: 178  LDFLFLIKWVGISHLHNTWHSYADLKTYKGFRKVDNYIKQYVIMVEEFKNDPFTTKEDIE 237

Query: 654  -INICDER-------WKQPQRVISLRSSKDGTREA----FVKWTGLPYDECTWEKLDEPA 701
             + I  ER       ++   R++  +   D   ++    FVKW  L YD  TWE  +E A
Sbjct: 238  SMYIEQERRLDELEEYRHVDRIVDSKRFTDSDGQSKLQYFVKWKRLYYDGNTWEDAEEIA 297

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQL 761
                SH+     +   + L        L       Q+     L +QP  +K G L   QL
Sbjct: 298  KIAPSHVNKYQARLNSKILPN------LSANYPSSQRPRFEKLVKQPVFIKNGELRDFQL 351

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
              LNW+   W +++N ILADEMGLGKTV   AF+S L    +   P +++VPLSTMP W 
Sbjct: 352  TGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHIIVVPLSTMPAWQ 411

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
              F  WAP+LN + Y G + +R +IR YE++     N N K   +KFN+LLTTYE IL D
Sbjct: 412  ETFEKWAPDLNCIYYVGNSASRRVIRDYEFY-----NDNNK---FKFNILLTTYEYILKD 463

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
               L G+ W+ L VDE HRLKNS S L+  L SF   +R+L+TGTPLQNNI E+  L NF
Sbjct: 464  RIELGGIKWQFLAVDEAHRLKNSESSLYESLISFKVTNRLLITGTPLQNNIKELSALCNF 523

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L P  F      + +  +    Q +++L+K + P +LRRLKKD  +++P KTER++ VEL
Sbjct: 524  LMPGKFDIEQEIDFETPNDEQEQYIKDLQKSIMPFILRRLKKDVEKSLPSKTERILRVEL 583

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGV--AQQSMLNIVMQLRKVCNHPYLIPGTEP----D 1055
            S +Q EYYR ++TKNY  L N G G   +Q S+LN++ +L+K  NHPYL  G E     +
Sbjct: 584  SDLQTEYYRNIITKNYSAL-NTGTGGKNSQISLLNVMNELKKASNHPYLFDGVEDKVLRN 642

Query: 1056 SGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
             GS      +R  I +S K+ LL  +L  L KEGHRVLIFSQM ++LDIL DYL+I+   
Sbjct: 643  YGSTTRDSILRGMIMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRILDILGDYLSIK--G 700

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              ++R+DG V    R+ +I  FN   S+ F+FLLSTR+ GLGINL TADTVII+DSD+NP
Sbjct: 701  YQFQRLDGGVPSAQRKISIDHFNAPGSKDFIFLLSTRAGGLGINLMTADTVIIFDSDWNP 760

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN---------- 1222
             AD+QAM RAHRIGQ+K + VYR V + +VEE IL+ A+KK++L+   ++          
Sbjct: 761  QADLQAMARAHRIGQTKHVSVYRFVSKDTVEEEILERARKKMILEYAIISLGITDPNNTK 820

Query: 1223 KSG----SQKEVEDILRWGTEELF-------------------NDSPGINGKDMGENNTS 1259
            K G    S  E+  IL++G   +F                   N    +   D+GE+N  
Sbjct: 821  KKGENNPSSNELSQILKFGAGNMFKENDNQKKLEELNLDEVLDNAQDHVTTPDLGESNLG 880

Query: 1260 IEEAVRDLE 1268
             EE +R  E
Sbjct: 881  SEEFLRQFE 889


>gi|195354154|ref|XP_002043565.1| GM19418 [Drosophila sechellia]
 gi|194127733|gb|EDW49776.1| GM19418 [Drosophila sechellia]
          Length = 882

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 288/667 (43%), Positives = 405/667 (60%), Gaps = 48/667 (7%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINI-------CD--ER--- 660
            E+ +KW   S  H  WI E ++ +     + +++ K       +       CD  ER   
Sbjct: 113  EYFIKWHDMSYWHCDWISEGKMLLHHATMVASFQRKSDMEEPCLEELEDQECDLHERFYR 172

Query: 661  ------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE--PALEKYSHLTDLF 712
                  W   QRVI+     +G+    VKW  L Y+E +WEK ++  P L +   L    
Sbjct: 173  YGIKPEWLVVQRVINHSKEPNGSTIYLVKWRELSYNESSWEKENDSIPGLNQAIAL---- 228

Query: 713  VQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGAL--FPHQLEALNWLRKC 770
              +++Q         + P    D  +       +QP  LK G L   P Q+E ++WLR  
Sbjct: 229  --YKKQRSSNKGRPKDRPAPTIDLNKK----YEDQPVFLKEGGLKLHPFQMEGVSWLRYS 282

Query: 771  WHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPN 830
            W +    ILADEMGLGKT+    F+ SL+ E   + P L+ VPLST+PNW  E  LWAP 
Sbjct: 283  WGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLPNWERELELWAPE 342

Query: 831  LNVVEYHGCAKARAIIRQYE--WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGV 888
            L  V Y G   ARA+IR++E  +       + +  + YKFNV+L +YE I  D+  L  +
Sbjct: 343  LYCVTYVGGKTARAVIRKHELSFEEVTTKTMRENQTQYKFNVMLASYEFISLDAVFLGSI 402

Query: 889  PWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 948
             W  LVVDE HRL+++ SK F +L+ +   +++LLTGTPLQNN+ E+++LLNFL    F 
Sbjct: 403  DWAALVVDEAHRLRSNQSKFFRILSRYRIAYKLLLTGTPLQNNLEELFHLLNFLSSGKFN 462

Query: 949  SLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEY 1008
             L +F+ +F D++  ++V+ L +++ PHMLRRLK D ++++PPK+E +V VELSS+Q ++
Sbjct: 463  DLQTFQAEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKF 522

Query: 1009 YRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP-GTEPDSGSVEFLHEMR- 1066
            Y+ +LTKN++ L   G G    S+LNI+M LRK CNHPYL P   E    S   ++EM  
Sbjct: 523  YKHILTKNFKALNQKGGGRV-CSLLNIMMDLRKCCNHPYLFPSAAEEAPISPSGIYEMNS 581

Query: 1067 -IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
              KAS KL LL  MLK+L K+ HRVL+FSQM+K+L+ILE +L  E     Y+R+DG++  
Sbjct: 582  LTKASGKLVLLSKMLKLLKKDNHRVLLFSQMSKMLNILEHFLEGE--GYQYDRIDGAIRG 639

Query: 1126 GDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQ AI RFN   S +FVFLLSTR+ GLGINLATADTVII+DSD+NPH D+QA +RAHR
Sbjct: 640  DLRQKAIDRFNDPGSEQFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHR 699

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN-------KSGSQKEVEDILRWG 1237
            +GQ K++++YR V   SVEERI+Q+AK+K+ML  L V         + S+ E+EDILR+G
Sbjct: 700  MGQKKKVMIYRFVTHNSVEERIMQVAKRKMMLTHLVVRPGMGGTATNFSKDELEDILRFG 759

Query: 1238 TEELFND 1244
            TE+LF D
Sbjct: 760  TEDLFKD 766



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/42 (64%), Positives = 30/42 (71%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG+LLCCDSCP  YH  CL PPLK IP G W CP+C
Sbjct: 39  CKVCRDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 80


>gi|340520248|gb|EGR50485.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1657

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 269/642 (41%), Positives = 394/642 (61%), Gaps = 53/642 (8%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVINI-------------- 656
            +E+ +KW GKS++H++W + E+   V   RK+ENY  K+    ++I              
Sbjct: 307  FEYFIKWQGKSHLHDTWELLETLRNVRGFRKVENYFRKFVDQELDIRFGDDIPPETKEQF 366

Query: 657  ---------CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                       E + + +RV+++R  +D   E FVKW GL Y+ECTWE   + +  ++  
Sbjct: 367  FLDRDRDEEALEDYTKVERVVAVRDGEDDD-EYFVKWKGLTYEECTWEAASDIS-GQFQD 424

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    +  + D  E  L        +S++  L +QP+ + GG L   QL+ LN+L
Sbjct: 425  KIDQFIDRSSRNWQSDKKETNLD------TRSKMTKLEKQPDFIVGGELREFQLKGLNFL 478

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W +  NVILADEMGLGKTV   +F+S L    + + P LV+ PLS +P W   F  W
Sbjct: 479  CLNWTRGNNVILADEMGLGKTVQTVSFLSWLRNARRQEGPSLVVAPLSVIPAWCDTFNNW 538

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            +P++N V Y G   AR+IIR+ E        +N      KFNVL+T+YE IL D   L+ 
Sbjct: 539  SPDINYVVYLGPEDARSIIRENELL------INGNPKKPKFNVLVTSYEFILQDWQFLQS 592

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+VL VDE HRLKNS S+L+  L  F    ++L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 593  IKWQVLAVDEAHRLKNSESQLYQRLLGFGIPCKILITGTPIQNNLAELSALLDFLNPGKV 652

Query: 948  PSLSSFEEKFNDLTTT---QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
                S +E  + L+     +K++EL + +AP++LRR K+    ++PPKTE+++ VELS +
Sbjct: 653  ----SIDEDLDSLSAADAQEKLQELHRSIAPYILRRTKETVESDLPPKTEKIIRVELSDV 708

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFL 1062
            Q EYY+ +LT+NY  L +   G  + S+LNI+M+L+KV NHPY+ PG E    +GS    
Sbjct: 709  QLEYYKNILTRNYAALCDATNG-HKNSLLNIMMELKKVSNHPYMFPGAEERVLAGSTRRE 767

Query: 1063 HEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             +++  I +S K+ L+  +L  L K+GHRVLIFSQM K+LDIL DYL++  G K ++R+D
Sbjct: 768  DQIKGLIASSGKMMLIDQLLSKLKKDGHRVLIFSQMVKMLDILGDYLSLR-GYK-FQRLD 825

Query: 1121 GSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++ G R+ AI  FN +D   F FLLSTR+ GLGINL TADTVII+DSD+NP AD+QAM
Sbjct: 826  GTIAAGPRRMAINHFNAEDSEDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAM 885

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
             RAHRIGQ + + +YRLV + +VEE +L+ A+ KL+L+ L +
Sbjct: 886  ARAHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTI 927


>gi|402590896|gb|EJW84826.1| chromodomain-helicase-DNA-binding protein 4 [Wuchereria bancrofti]
          Length = 1519

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 292/697 (41%), Positives = 400/697 (57%), Gaps = 90/697 (12%)

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTL 720
            W Q QR+I+         +  VKW  L Y++ TWE+ D+  +  Y    D  +++   T 
Sbjct: 417  WMQVQRIINHVQYGKTQFDYLVKWRELVYEQATWER-DDFDIMGYD---DAIIKY--WTH 470

Query: 721  KKDASEDELPRGKGDCQQSEIVALTE----------------------------QPEELK 752
            ++  + D LP+       ++ V   +                            QP+ + 
Sbjct: 471  RQRMNGDVLPKHIAKKLAAKKVEEGKDKDDEEEEDCKKKKKKEPKTDLRKKYETQPDFIT 530

Query: 753  --GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLV 810
              GG L  +QLE +NWLR CW +  + ILADEMGLGKT+ +  F+ SL  E   + P LV
Sbjct: 531  ETGGKLHDYQLEGINWLRHCWSQGTDAILADEMGLGKTIQSMVFLYSLVKEGHTRGPFLV 590

Query: 811  LVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWH--------ASDPDNLNKK 862
              PLST+ NW  E   W P+  VV Y G   +R +IR++E+            P  L K 
Sbjct: 591  AAPLSTLINWEREAEFWCPDFYVVTYVGDKDSRTVIREHEFSFIEGAVRGGPKPSRL-KT 649

Query: 863  TSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVL 922
                KF+VLLT+YE+I  D S L  + W  LVVDE HRLKN+ S  F  L  F   +R+L
Sbjct: 650  DQGIKFHVLLTSYELINIDKSILSSIEWAGLVVDEAHRLKNNQSLFFRTLRDFRINYRLL 709

Query: 923  LTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLK 982
            LTGTPLQNN+ E+++LLNFL P  F  + SF  +F +++   ++++L  L+ PHMLRRLK
Sbjct: 710  LTGTPLQNNLEELFHLLNFLSPDRFYDMDSFTHEFAEISKEDQIQKLHSLLGPHMLRRLK 769

Query: 983  KDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKV 1042
             D +  +P K+E +V VELS +Q +YY+ +LT+N++ L   G G +Q S++NI+M L+K 
Sbjct: 770  ADVLSGMPSKSELIVRVELSPMQKKYYKNILTRNFEALSPKGGG-SQISLINIIMDLKKC 828

Query: 1043 CNHPYLIPGTEPDSGSVE---FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKL 1099
            CNHPYL P    ++  ++   +     +KAS K  LL  MLK L ++GHRVLIFSQMTK+
Sbjct: 829  CNHPYLFPKASIEAPKLKNGIYEGTALVKASGKFVLLQKMLKKLKEQGHRVLIFSQMTKM 888

Query: 1100 LDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLA 1158
            LDI+ED+   E G K YER+DGS++   RQ AI RFN  +  +FVFLLSTR+ GLGINLA
Sbjct: 889  LDIMEDFCENE-GYK-YERIDGSITGQARQDAIDRFNAANAQQFVFLLSTRAGGLGINLA 946

Query: 1159 TADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ 1218
            TADTVIIYDSD+NPH DIQA +RAHRIGQ K++L+YR V R SVEERI  +AKKK++L  
Sbjct: 947  TADTVIIYDSDWNPHNDIQAFSRAHRIGQQKKVLIYRFVTRNSVEERITSVAKKKMLLTH 1006

Query: 1219 LFVNKSGSQK-------EVEDILRWGTEELFNDSPGINGK-DMGENNTSIEEAVRDLEQK 1270
            L V     QK       E++++LRWGTEELF +      + + GE  TS +E        
Sbjct: 1007 LVVRAGIGQKGPSMSKSELDEVLRWGTEELFKEDETTTAEGEQGEKKTSEQE-------- 1058

Query: 1271 HRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRS 1307
                                  I+WD+ A+  LLDRS
Sbjct: 1059 ----------------------IIWDDEAVDALLDRS 1073



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 28/42 (66%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C  C  GG LLCCD+CP +YH  CL+P L  IP G W CP+C
Sbjct: 236 CRTCKEGGWLLCCDTCPSSYHAYCLNPSLTEIPEGDWSCPRC 277



 Score = 67.8 bits (164), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CP+ YHL CLDP ++  P G+W CP C
Sbjct: 173 CEVCQQGGEIILCDTCPKAYHLVCLDPDMEEPPEGRWSCPTC 214


>gi|334187075|ref|NP_001190884.1| putative chromatin remodeling factor [Arabidopsis thaliana]
 gi|332660577|gb|AEE85977.1| putative chromatin remodeling factor [Arabidopsis thaliana]
          Length = 1161

 Score =  488 bits (1256), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/610 (44%), Positives = 395/610 (64%), Gaps = 37/610 (6%)

Query: 661  WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTL 720
            WK   R+I+ R   DG  E  VK+  L Y    WE   E  +  + +    F      + 
Sbjct: 100  WKTVDRIIACREGDDG-EEYLVKYKELSYRNSYWES--ESDISDFQNEIQRFKDINSSSR 156

Query: 721  KKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILA 780
            +    E+E  R + + +Q ++      PE L G  L  +QLE LN+LR  W K  NVILA
Sbjct: 157  RDKYVENE--RNREEFKQFDLT-----PEFLTG-TLHTYQLEGLNFLRYSWSKKTNVILA 208

Query: 781  DEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCA 840
            DEMGLGKT+ + AF++SL+ E  +  P LV+ PLST+ NW  EFA WAP++NVV Y G +
Sbjct: 209  DEMGLGKTIQSIAFLASLFEENLS--PHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDS 266

Query: 841  KARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            +AR +I ++E++ S+     +K+   KF+VLLTTYEM+    S L  + W  +++DEGHR
Sbjct: 267  EARDVIWEHEFYFSE----GRKS---KFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHR 319

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN  SKL+S L+ F+ +H VLLTGTPLQNN+ E++ L++FL    F SL    EKF D+
Sbjct: 320  LKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGSL----EKFQDI 375

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQN-IPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
               +++  L +++APH+LRRLKKD +++ +PPK E ++ V++SS Q E Y+A++T NYQ+
Sbjct: 376  NKEEQISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQV 435

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSM 1079
            L    K  A+ S  N++M+LR+VC+HPYL+P  EP            ++AS KL LL  M
Sbjct: 436  LTK--KRDAKIS--NVLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKM 491

Query: 1080 LKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDK 1139
            +  L ++GHRVLI++Q    L +LEDY    F    YER+DG +S  +RQ  I RFN + 
Sbjct: 492  MVKLKEQGHRVLIYTQFQHTLYLLEDYFT--FKNWNYERIDGKISGPERQVRIDRFNAEN 549

Query: 1140 S-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVV 1198
            S RF FLLSTR+ G+GINLATADTVIIYDSD+NPHAD+QAM R HR+GQ+ ++++YRL+ 
Sbjct: 550  SNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIH 609

Query: 1199 RASVEERILQLAKKKLMLDQLFVNKSG-SQKEVEDILRWGTEELF---NDSPGINGKDMG 1254
            + +VEER++++ K K++L+ L V K    Q E++DI+++G++ELF   ND  G +GK + 
Sbjct: 610  KGTVEERMMEITKNKMLLEHLVVGKQHLCQDELDDIIKYGSKELFSEENDEAGRSGK-IH 668

Query: 1255 ENNTSIEEAV 1264
             ++ +IE+ +
Sbjct: 669  YDDAAIEQLL 678


>gi|34533780|dbj|BAC86802.1| unnamed protein product [Homo sapiens]
          Length = 1225

 Score =  488 bits (1255), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 282/653 (43%), Positives = 379/653 (58%), Gaps = 64/653 (9%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAK------- 648
            EP++     ++G     EF VKW G S  H SW+ E QL++       NY+ K       
Sbjct: 494  EPSLPPPKPLEG-IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPP 552

Query: 649  ---YGT--------------TVINICDER---------WKQPQRVISLRSSKDGTREAFV 682
               YG+               +    +ER         W    R+++    K G     +
Sbjct: 553  PFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLI 612

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDAS-------------EDEL 729
            KW  LPYD+CTWE +D+  +  Y +L   +       L +D               +D+ 
Sbjct: 613  KWKDLPYDQCTWE-IDDIDIPYYDNLKQAYWGHRELMLGEDTGLPKRLLKKGKKLRDDKQ 671

Query: 730  PRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
             +          V   +QP  +   GG L P+QLE LNWLR  W +  + ILADEMGLGK
Sbjct: 672  EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGK 731

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV    F+ SLY E  +K P LV  PLST+ NW  EF +WAP+  VV Y G  ++R++IR
Sbjct: 732  TVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIR 791

Query: 848  QYEWHASDPDNLN-------KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            + E+   D    +       KK    KF+VLLT+YE+I  D + L  + W  LVVDE HR
Sbjct: 792  ENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHR 851

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN+ SK F +LNS+   +++LLTGTPLQNN+ E+++LLNFL P  F +L  F E+F D+
Sbjct: 852  LKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADI 911

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
            +   ++++L  L+ PHMLRRLK D  +N+P KTE +V VELS +Q +YY+ +LT+N++ L
Sbjct: 912  SKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEAL 971

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---EPDSGSVEFLHEMRIKASAKLTLLH 1077
             + G G  Q S+LNI+M L+K CNHPYL P      P   +  +     +K+S KL LL 
Sbjct: 972  NSKGGG-NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQ 1030

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             MLK L  EGHRVLIFSQMTK+LD+LED+L  E+    YER+DG ++ G RQ AI RFN 
Sbjct: 1031 KMLKKLRDEGHRVLIFSQMTKMLDLLEDFL--EYEGYKYERIDGGITGGLRQEAIDRFNA 1088

Query: 1138 DKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSK 1189
              + +F FLLSTR+ GLGINLATADTVIIYDSD+NPH DIQA +RAHRIGQ+K
Sbjct: 1089 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQTK 1141



 Score = 80.1 bits (196), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCD+CP +YHL CL+PPL  IPNG+W CP+CT
Sbjct: 419 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 461



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 71  NDGYYYE------CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           +DG  YE      C +C  GG ++ CD+CPR YHL CLDP L++ P GKW CP C ++  
Sbjct: 333 DDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGI 392

Query: 125 QLKP 128
           Q +P
Sbjct: 393 QWEP 396


>gi|340372667|ref|XP_003384865.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
            [Amphimedon queenslandica]
          Length = 1669

 Score =  488 bits (1255), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 275/692 (39%), Positives = 412/692 (59%), Gaps = 93/692 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAKYG----------------TTV 653
            ++LVKW+G S++HN+W  E+ L    V   ++L+NY  K                  + +
Sbjct: 431  QYLVKWLGWSHLHNTWETEASLLKANVKGMKRLQNYIKKEEEREEWEERANPEDLEYSKI 490

Query: 654  INICDER----WKQPQRVISLRSSKDGT-REAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
                +ER    +K+ +RVI  R +++G+ +E   KW GLPY ECTWE  +         L
Sbjct: 491  QQELNERLLDQFKEVERVIDARRTEEGSGQEYLCKWKGLPYSECTWEDGE--------LL 542

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDC----------QQSEIVALTEQPEELKGG---- 754
            TDL+ Q           +D + R + DC           + +     EQP  + GG    
Sbjct: 543  TDLYQQ---------EIDDYMYRNESDCVPCRSAKVLRSRPKFSVFKEQPSFIGGGNEQL 593

Query: 755  ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPL 814
             L  +QL+ +NWL   W K+ +VILADEMGLGKT+   +F+SSL+  +    P LV+VPL
Sbjct: 594  QLRDYQLDGVNWLVSSWCKNNSVILADEMGLGKTIQTISFLSSLFHIYNLYGPYLVVVPL 653

Query: 815  STMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEW-HASDPDNLNKKTSSYKFNVLLT 873
            ST+P+W  EF+LWAP++N + Y G   +R +I+  EW HA+          + KFNV++T
Sbjct: 654  STLPSWQREFSLWAPSMNTLVYIGDVTSRKMIQDTEWAHAN---------GNIKFNVVIT 704

Query: 874  TYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIG 933
            TYE++L D   L  V W VLVVDE HRLKN  S L+  LN F   HR+L+TGTPLQN++ 
Sbjct: 705  TYEILLKDKDFLGDVSWAVLVVDEAHRLKNDDSLLYKTLNMFHTNHRLLVTGTPLQNSLK 764

Query: 934  EMYNLLNFLQPASFPSLSSFEEKFNDL--TTTQKVEELKKLVAPHMLRRLKKDAMQNIPP 991
            E+++L++F+    FPS   FEE+        T  +  L + + P++LRR+KKD  +++P 
Sbjct: 765  ELWSLIHFIMKDKFPSWEEFEEEHKAYHEGDTSNLSSLHQQLEPYLLRRIKKDVEKSLPS 824

Query: 992  KTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG 1051
            K E+++ VE+SS+Q +YYR +LT+NY+ L    KG +    +N++M+L+K CNH Y++  
Sbjct: 825  KVEQILRVEMSSVQKQYYRWILTRNYKALSKGVKG-SITGFINVLMELKKCCNHVYIV-- 881

Query: 1052 TEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEF 1111
              PD+  V+   +  ++ S KL LL  +L  L ++GHRVLIFSQM ++LDIL +Y+  +F
Sbjct: 882  RTPDTPEVKDPLQSLLRGSGKLYLLDKLLVRLKEKGHRVLIFSQMVRMLDILAEYM--KF 939

Query: 1112 GPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDF 1170
                Y+R+DGS++   R+ +I  FN + S+ F FLLSTR+ GLG+NLATADTV+I+DSD+
Sbjct: 940  RHFLYQRLDGSITGQQRKESIDHFNAEGSQDFCFLLSTRAGGLGVNLATADTVVIFDSDW 999

Query: 1171 NPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS---- 1226
            NP  D+QA  RAHRIGQ+K++ +YR V R SVEE I++ AK+K++LD L + +  +    
Sbjct: 1000 NPQNDLQAQARAHRIGQTKQVNIYRFVTRNSVEEDIIERAKRKMVLDHLVIQRMDTTGRT 1059

Query: 1227 ----------------QKEVEDILRWGTEELF 1242
                            + E+  IL++G E+LF
Sbjct: 1060 ILSHTTSDQGRNVPFDKDELTAILKFGAEDLF 1091


>gi|255718763|ref|XP_002555662.1| KLTH0G14498p [Lachancea thermotolerans]
 gi|238937046|emb|CAR25225.1| KLTH0G14498p [Lachancea thermotolerans CBS 6340]
          Length = 1436

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 292/683 (42%), Positives = 399/683 (58%), Gaps = 64/683 (9%)

Query: 611  SYEFLVKWVGKSNIHNSWIPESQL-KVLAKRKLENYKAKY----------------GTTV 653
            SYEFL+KW  +S++HNSW   S++ +V   +K++NY  ++                   V
Sbjct: 191  SYEFLIKWTDESHLHNSWETYSEIGQVRGIKKIDNYIKQFIILDKQIREDPYTTAEDMEV 250

Query: 654  INICDER-------WKQPQRVI-SLR-SSKDGTRE--AFVKWTGLPYDECTWEKLDEPAL 702
            +++  ER       +K P+R+I S R S +DG+ +    VKW  L YDE TWE     A 
Sbjct: 251  MDLEQERRLDEFEEYKIPERIIDSDRVSMEDGSSQLQYLVKWRRLNYDEATWEN----AG 306

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLE 762
                   D    F+ +   K   +     G    ++ +   L+EQP  +KGG L   QL 
Sbjct: 307  TIVRMAPDQVKHFQNRVNSKILPQYSSHYG---SERPKFEKLSEQPSFIKGGELRDFQLT 363

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             +NW+   W K+ N ILADEMGLGKTV   AFIS L    +   P LV+VPLSTMP W  
Sbjct: 364  GINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIYARRQNGPHLVVVPLSTMPAWQE 423

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
             F  WAP+LN + + G  K+R  IR+ E++ ++P    KK +  KFNVLLTTYE IL D 
Sbjct: 424  TFEKWAPDLNCIYFMGNQKSRDAIRENEFY-TNPQAKTKKHA--KFNVLLTTYEYILKDR 480

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L  + W+ L VDE HRLKNS S L+  LNSF   +R+L+TGTPLQNNI E+  L+NFL
Sbjct: 481  AELGAMKWQFLAVDEAHRLKNSESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFL 540

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F      + +  D      + EL   + P +LRRLKKD  +++P KTER++ VELS
Sbjct: 541  MPGRFTIDQEIDFENQDEEQETYIRELHSRLQPFILRRLKKDVEKSLPSKTERILRVELS 600

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP------DS 1056
             +Q +YY+ +LTKNY  L    KG A  S+LNI+ +L+K  NHPYL    E         
Sbjct: 601  DVQTDYYKNILTKNYSALSAGSKG-AHFSLLNIMNELKKASNHPYLFDMAEDRVLAKFGD 659

Query: 1057 GSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPK 1114
            G +   + +R  I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYLNI+    
Sbjct: 660  GKMSRENILRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLNIK--GV 717

Query: 1115 TYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPH 1173
             Y+R+DG+V    R+ +I  FN  D + FVFLLSTR+ GLGINL TADTVII+DSD+NP 
Sbjct: 718  NYQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQ 777

Query: 1174 ADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------ 1221
            AD+QAM RAHRIGQ   ++VYR V + +VEE +L+ A+KK++L+   +            
Sbjct: 778  ADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGSSVAQ 837

Query: 1222 NKSG--SQKEVEDILRWGTEELF 1242
            NK    S  E+ +IL++G   +F
Sbjct: 838  NKKSDPSAGELSEILKFGAGNMF 860


>gi|321468122|gb|EFX79109.1| hypothetical protein DAPPUDRAFT_319863 [Daphnia pulex]
          Length = 4355

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 277/669 (41%), Positives = 378/669 (56%), Gaps = 59/669 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL-----KVLAKRKLENYKAKYGTTVINICDERWKQPQ-- 665
            E+ VK+   S +H  W  E +L     ++  K K  + K      +    +E    P   
Sbjct: 1550 EYYVKYKNFSYLHCEWRTEEELVRGDKRIPQKLKRFHQKKAQSANMFEFLEEDLFNPDYI 1609

Query: 666  ---RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDE---PALEKYSHLTDLFVQ 714
               RV+      D      TR   VKW  LPY++ TWE L+E   PA  K+  + + +  
Sbjct: 1610 EVDRVLDKAEHTDAATNKVTRNFLVKWKSLPYEDSTWE-LEEDVDPAKIKHYEIVNKYPG 1668

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKS 774
             E+         D   +G+   + SE   L E P  L G  L  +QLE LNWL   W   
Sbjct: 1669 KEK---------DMFGKGRKKPRPSEWKKLDESPVYLNGNTLREYQLEGLNWLSFSWFNG 1719

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
            +N ILADEMGLGKT+ + AF+ S++     + P LV+ PLST+PNW  EF  W  NLN++
Sbjct: 1720 RNCILADEMGLGKTIQSLAFVESVH-RLGIRGPFLVIAPLSTIPNWQREFETWT-NLNII 1777

Query: 835  EYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
             YHG   +R ++++YE+H  D    N+    YKFNVL+TT+EMI++D   LR VPW + V
Sbjct: 1778 VYHGSNPSRTMLQEYEFHYKD-SKGNQIKEMYKFNVLITTFEMIISDCMELREVPWRLCV 1836

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            +DE HRLKN   KL   L     +HRVLL+GTPLQNNI E+Y+LLNFL+PA F S   F 
Sbjct: 1837 IDEAHRLKNKNCKLLEGLRLLQMEHRVLLSGTPLQNNISELYSLLNFLEPAQFASSEDFT 1896

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
              F DL +  +V++L+ L+ P MLRRLK+D  +++ PK E +V VEL+++Q +YYR +L 
Sbjct: 1897 RDFGDLKSDDQVQKLQALLKPMMLRRLKEDVEKSLAPKEETIVEVELTNMQKKYYRGILE 1956

Query: 1015 KNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---------SGSVEFLHEM 1065
            +N+  L          +++N +M+LRK C HPYL+ G E           +   +  H+ 
Sbjct: 1957 RNFSFLTKGTTNANVPNLMNTMMELRKCCIHPYLLNGAEEQIQYEMKVSHTSDPDLHHKA 2016

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             I++S KL L+  +L  L  +GHRVLIFSQM + LDILEDYL     P  YER+DG +  
Sbjct: 2017 LIQSSGKLVLVDKLLPKLKADGHRVLIFSQMVRCLDILEDYLIYRKYP--YERLDGRIRG 2074

Query: 1126 GDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQAAI R+   D  RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  R HR
Sbjct: 2075 NMRQAAIDRYCKPDSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHR 2134

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK------------SGSQ----K 1228
            IGQ K + +YRL+ R + E  +   A  KL LD+  +              SG Q    K
Sbjct: 2135 IGQKKMVKIYRLLTRNTYEREMFDKASLKLGLDKAVLQSMNTTQGGKDYGGSGKQPLSKK 2194

Query: 1229 EVEDILRWG 1237
            E+ED+L+ G
Sbjct: 2195 EIEDLLKKG 2203


>gi|312372079|gb|EFR20122.1| hypothetical protein AND_20633 [Anopheles darlingi]
          Length = 2227

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/574 (47%), Positives = 370/574 (64%), Gaps = 64/574 (11%)

Query: 753  GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLV 812
            G  L P+QLE +NWLR  W    + ILADEMGLGKT+    F+ SLY E   + P LV V
Sbjct: 811  GMRLHPYQLEGINWLRYSWVHGTDTILADEMGLGKTIQTATFLYSLYKEGHCRGPFLVAV 870

Query: 813  PLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ----YEWHASDPDNLNK-KTSSYK 867
            PLST+ NW  EF  WAP+   + Y G  ++RA+IR+    +E  A      ++ + SS K
Sbjct: 871  PLSTIINWEREFETWAPDFYCITYVGDKESRAVIRENELSFEEGAVRGGKASRIRASSIK 930

Query: 868  FNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTP 927
            FNVLLT+YE+I  D++ L  + W VLVVDE HRLK++ SK F +LN ++  +++LLTGTP
Sbjct: 931  FNVLLTSYELITIDAACLGSIDWSVLVVDEAHRLKSNQSKFFKVLNGYNIAYKLLLTGTP 990

Query: 928  LQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQ 987
            LQNN+ E+++LLNFL    F  L+ F+ +F D++  ++V+ L +++ PHMLRRLK D ++
Sbjct: 991  LQNNLEELFHLLNFLNKNKFNELAEFQSEFADISKEEQVKRLHEMLGPHMLRRLKADVLK 1050

Query: 988  NIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPY 1047
            N+P K+E +V VELS +Q +YY+ +LT+NY+ L   G G A  S++NI+M L+K CNHPY
Sbjct: 1051 NMPTKSEFIVRVELSPLQKKYYKYILTRNYEALNPKGGGGA-CSLINIMMDLKKCCNHPY 1109

Query: 1048 LIPGTEPDS-----GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDI 1102
            L      ++     G+ E   +   KA+ KL LL  MLK+L  +GHRVLIFSQMTK+LDI
Sbjct: 1110 LFAAAAEEATLGPGGNYEL--QSLTKAAGKLVLLEKMLKLLKSQGHRVLIFSQMTKMLDI 1167

Query: 1103 LEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATAD 1161
            LED+L    G K YER+DG ++   RQ AI RFN   + +F FLLSTR+ GLGINLATAD
Sbjct: 1168 LEDFLE-GLGYK-YERIDGGITGSIRQEAIDRFNAPGAPQFCFLLSTRAGGLGINLATAD 1225

Query: 1162 TVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            TVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V R SVEER+ Q+AK+K+ML  L V
Sbjct: 1226 TVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1285

Query: 1222 -------NKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
                     + +++E++DILR+GTEELF +    +GKD        EEA+          
Sbjct: 1286 RPGMGGKGTNFTKQELDDILRFGTEELFKE----DGKD--------EEAIH--------- 1324

Query: 1275 GGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSN 1308
                                +DE A+A LLDRSN
Sbjct: 1325 --------------------YDEKAVAELLDRSN 1338



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C IC  GG LLCCD+CP  YH  CL+PPL  IP+G W+CP+C+
Sbjct: 517 CRICKDGGELLCCDNCPSAYHTFCLNPPLDDIPDGDWRCPRCS 559



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 29/42 (69%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           C +C  GG ++ CD+CP+ YHL CLDP L+  P GKW CP C
Sbjct: 459 CEVCQQGGEIILCDTCPKAYHLVCLDPELEDTPEGKWSCPTC 500


>gi|302915751|ref|XP_003051686.1| SNF2 family chromodomain-helicase DNA-binding protein [Nectria
            haematococca mpVI 77-13-4]
 gi|256732625|gb|EEU45973.1| SNF2 family chromodomain-helicase DNA-binding protein [Nectria
            haematococca mpVI 77-13-4]
          Length = 1557

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/642 (42%), Positives = 393/642 (61%), Gaps = 53/642 (8%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKYGTTVINI-------------- 656
            +E+ +KW GKS++H++W     L+ V   RK+ENY  K+    ++I              
Sbjct: 298  FEYFIKWQGKSHLHDTWETLDDLRNVRGFRKVENYFKKFVDYELDIRFGDDIPPETKEQF 357

Query: 657  ---------CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                       E + + +RV++ R  +DG  E  VKW GL Y+ECTWE   + + + +  
Sbjct: 358  FLDRERDDEAYEDYIKVERVVATRDGEDGD-EYLVKWKGLTYEECTWEAAADIS-DMFQD 415

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D ++    ++ + D  E  L        +S +V L +QP+ + GG L   QL  LN+L
Sbjct: 416  QIDQYLDRASRSWQSDRKETSLD------SRSRMVKLEKQPDYIVGGELRSFQLRGLNFL 469

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W +  NVILADEMGLGKTV   +F+S L      + P LV+ PLS +P W   F  W
Sbjct: 470  CLNWCRGNNVILADEMGLGKTVQTVSFLSWLRNARHQEGPSLVVAPLSVIPAWCDTFNTW 529

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            +P+LN V Y G   AR IIR++E      DN  KK    KFN+L+T+YE IL D   L+ 
Sbjct: 530  SPDLNYVVYLGPEDARNIIREHELLV---DNNPKKP---KFNILVTSYEFILQDWQFLQS 583

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ L VDE HRLKN  S+L+S L SF    +VL+TGTP+QNN+ E+  LL+FL P   
Sbjct: 584  IKWQTLAVDEAHRLKNRESQLYSRLVSFGIPCKVLITGTPIQNNLAELSALLDFLNPGKV 643

Query: 948  PSLSSFEEKFNDLTTT---QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
                + +E  + L+     +K+++L K +AP +LRR K+    ++PPKTE+++ VELS +
Sbjct: 644  ----AIDEDLDSLSANDAQEKLQQLHKAIAPFILRRTKETVESDLPPKTEKIIRVELSDV 699

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFL 1062
            Q +YY+ +LT+NY  L +   G  + S+LNI+M+L+K+ NHPY+ PG E    +GSV   
Sbjct: 700  QLDYYKNILTRNYTALCDATNG-HKNSLLNIMMELKKISNHPYMFPGAEEKVLAGSVRRE 758

Query: 1063 HEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL DYL++  G K ++R+D
Sbjct: 759  DQIKGLIASSGKMMLLDQLLSKLKKDGHRVLIFSQMVKMLDILGDYLSLR-GYK-FQRLD 816

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++ G R+ AI  FN D S  F FLLSTR+ GLGINL TADTV+I+DSD+NP AD+QAM
Sbjct: 817  GTIAAGPRRMAINHFNADDSDDFCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAM 876

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
             RAHRIGQ + + +YRLV + +VEE +L+ A+ KL+L+ L +
Sbjct: 877  ARAHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTI 918


>gi|198432555|ref|XP_002131918.1| PREDICTED: similar to chromodomain helicase DNA binding protein 3
            [Ciona intestinalis]
          Length = 1904

 Score =  484 bits (1247), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 284/702 (40%), Positives = 401/702 (57%), Gaps = 58/702 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDE------------- 659
            EFL+K+   S     WI E Q+++    +   Y  +         DE             
Sbjct: 513  EFLIKFHAFSYWDVEWISELQMEIYCPHQWRTYTRRNDMEEPTQLDEDDEWTDKQLIEKY 572

Query: 660  -------RWKQPQRVISLRS-SKDGTREAFVKWTGLPYDECTWEKLDE--PALE----KY 705
                    W    R+++ R   +    +  VKW  L YD+ TWE  D+  P ++    KY
Sbjct: 573  YRYGIQPEWLAIHRILNSRKVPRSSQLQYLVKWKHLAYDKATWEPEDKDIPGMKDEIKKY 632

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK--GGALFPHQLEA 763
                +     E     K     +  + + D  +  +    +QP  +   G +L  +QLE 
Sbjct: 633  KEHKNFI---EGGKGGKKKKRKDEKKNRPDPSEKYV----DQPTFITDLGLSLHEYQLEG 685

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LNWLR  W +  + ILADEMGLGKT+    F+ SL  E   + P L+ VPLSTM NW  E
Sbjct: 686  LNWLRFSWTQGTDTILADEMGLGKTIQTIVFVKSLVEEGHTRGPFLISVPLSTMINWERE 745

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSS-------YKFNVLLTTYE 876
            F LWAPNL VV Y+G   +RA+IR  E+   D    +   +S        KF+VLLT+YE
Sbjct: 746  FELWAPNLYVVSYYGDRDSRAVIRDNEFSYDDNAIRSGAKASRLKSGCLVKFHVLLTSYE 805

Query: 877  MILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMY 936
            M   DS+ L  V W ++ +DE HRLKN+ SK F +L+ ++  H++LLTGTPLQNN+ E++
Sbjct: 806  MCTIDSATLSSVDWVMVCIDEAHRLKNNQSKFFKVLSEYNVAHKLLLTGTPLQNNLEELF 865

Query: 937  NLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERM 996
            +LLNFL P  F  ++ F ++F ++    +V++L +++ PHMLRRLK D +  +  K+E +
Sbjct: 866  HLLNFLVPDKFTDMNGFLDEFAEIAQEDQVKKLHEMLGPHMLRRLKADVLTGLASKSEFI 925

Query: 997  VPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEP 1054
            V V LS +Q ++YR +L +N++ L + G G    S+LNI+M L+K CNHPYL   P  E 
Sbjct: 926  VRVNLSPLQRKFYRYILARNFKGLNSRG-GPNNSSLLNIMMDLKKCCNHPYLFNKPAEEA 984

Query: 1055 D-SGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
              S +  F      K S KL +L  ML+ L   G+RVLIFSQMT++LDILED+L  E+  
Sbjct: 985  QRSHNGAFEGTELTKTSGKLIVLQKMLRKLKDRGNRVLIFSQMTRMLDILEDFL--EYEG 1042

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              YER+DGS++   RQ +I RFN   S  F FLLSTR+ GLGINLATADTV IYDSD+NP
Sbjct: 1043 YKYERIDGSITGSIRQESIDRFNAPNSDHFAFLLSTRAGGLGINLATADTVFIYDSDWNP 1102

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKS 1224
            H DIQA +RAHRIGQ+ ++++YR V + SVEER+ ++AK+K+ML  L V          S
Sbjct: 1103 HNDIQAFSRAHRIGQTNKVMIYRFVTKNSVEERVAEVAKRKMMLTHLVVRPGMGSSKTAS 1162

Query: 1225 GSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRD 1266
             +++E++DIL++GTE LF D     G D    +    EA+ D
Sbjct: 1163 MTKQELDDILKFGTEALFKDEDDAEGNDFIHYDDKAIEALLD 1204



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 34/43 (79%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C  C  GG+LL CD+CP +YHL CL+PP++++P G+W CP+CT
Sbjct: 426 CSRCKDGGDLLICDTCPHSYHLNCLNPPVEKVPEGEWSCPRCT 468



 Score = 71.2 bits (173), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 6/61 (9%)

Query: 72  DGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKNDQLK 127
           DGY  +    C +C  GG ++ CD CPR YHL CL+PPL + P G W CP C +  + +K
Sbjct: 337 DGYETDHQDYCEVCKQGGEIILCDGCPRAYHLVCLEPPLDQPPEGSWPCPTCVK--NGIK 394

Query: 128 P 128
           P
Sbjct: 395 P 395


>gi|164427331|ref|XP_963868.2| hypothetical protein NCU03060 [Neurospora crassa OR74A]
 gi|157071698|gb|EAA34632.2| hypothetical protein NCU03060 [Neurospora crassa OR74A]
          Length = 1664

 Score =  484 bits (1247), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 278/658 (42%), Positives = 392/658 (59%), Gaps = 68/658 (10%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY----------GTTVINICDER 660
            +E+ +KW G+S  HN+W   E+       R+LENY  K           G  +     E+
Sbjct: 297  FEYFIKWQGQSYPHNTWETTETVAGFRGFRRLENYYKKVVEYELEMQFGGDDISPEQKEQ 356

Query: 661  W--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK---LDEPALE 703
            W               + +RV+++R   +GT E ++KW GL YDECTWE    + E A +
Sbjct: 357  WYLDREREQEALEDYTKVERVVAVRDGDEGT-EYYIKWKGLQYDECTWEAESLVAELAQD 415

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEA 763
            K +   D       Q+ +K  + D          +S +  L +QP+ +KGG L   Q++ 
Sbjct: 416  KINQFLDR-CNRSWQSDRKQTNPD---------TRSRMTKLEKQPDYIKGGELREFQMKG 465

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LN+L   W +  NVILADEMGLGKTV + +F+S L  E   + P LV+ PLS +P W   
Sbjct: 466  LNFLALNWVRGNNVILADEMGLGKTVQSVSFLSWLRNERGQEGPFLVVAPLSVIPAWCDT 525

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F  WAP+LN V Y G   AR+ IR YE      D   KKT   KFNVL+T+Y+ ILAD+ 
Sbjct: 526  FNHWAPDLNYVVYLGPEAARSNIRDYELFV---DGNPKKT---KFNVLVTSYDYILADAD 579

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
            HL+ + W+VL VDE HRLKN  S+L+  LN+F    +VL+TGTP+QNN+ E+  LL+FL 
Sbjct: 580  HLKNIKWQVLAVDEAHRLKNRESQLYIKLNNFGVPCKVLITGTPIQNNLAELSALLDFLN 639

Query: 944  PA------SFPSLSSFEEK---------FNDLTTTQKVEELKKLVAPHMLRRLKKDAMQN 988
            P          +LS+ + K            + T +K+ EL + +AP +LRR K+    +
Sbjct: 640  PGKVVIDEELEALSTADNKGPTDEEQDEARRIRTQEKLRELHQSIAPFILRRTKETVESD 699

Query: 989  IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYL 1048
            +PPKTE+++ VELS +Q +YY+ +LT+NY  L +   G  +QS+LNI+M+L+KV NHPY+
Sbjct: 700  LPPKTEKIIRVELSDVQLDYYKNILTRNYAALSDASNG-HKQSLLNIMMELKKVSNHPYM 758

Query: 1049 IPGTEPD--SGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILE 1104
              G E    +GS     +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL 
Sbjct: 759  FQGAEERVLNGSTRREDQIKGLITSSGKMMLLDQLLAKLRKDGHRVLIFSQMVKMLDILG 818

Query: 1105 DYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTV 1163
            DYL +      ++R+DG++  G R+ AI  FN + S  F FLLSTR+ GLGINL TADTV
Sbjct: 819  DYLRVR--GYQFQRLDGTIPAGPRRMAINHFNAEGSDDFCFLLSTRAGGLGINLMTADTV 876

Query: 1164 IIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            IIYDSD+NP AD+QAM RAHRIGQ + + VYRLV + ++EE +++ A+ KL L+ L +
Sbjct: 877  IIYDSDWNPQADLQAMARAHRIGQKRPVNVYRLVAKQTIEEEVVKRARNKLFLEYLTI 934


>gi|407926482|gb|EKG19449.1| SNF2-related protein [Macrophomina phaseolina MS6]
          Length = 1597

 Score =  484 bits (1247), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 270/649 (41%), Positives = 388/649 (59%), Gaps = 54/649 (8%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKYGTTVINIC---------DERW 661
            +E+L+KWVGK+  H ++   S L      RK+ENY  K     I I           E+W
Sbjct: 296  FEYLIKWVGKAPYHATYEEFSSLSSYKGFRKVENYFRKVVLEEIMIMGDPEVPSEEKEKW 355

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK---LDEPALEK 704
                          +  +RVI+ +  ++ T E  VKW  LPY+ECTWE    + + A E+
Sbjct: 356  NLDREKVEDFHEDSRHVERVIASQEGEEET-EYLVKWKALPYEECTWEPASLVGQLAQEQ 414

Query: 705  YSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEAL 764
                 D ++    +    D  E  +        + + VA+ EQPE +K G L   QL  +
Sbjct: 415  ----IDRYLDRSSKVPVSDKRESNI------ATRRKYVAIREQPEYIKFGQLRDFQLRGV 464

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            ++L   W K  N ILADEMGLGKTV   +F++ L  +   + P +V+VPLST+P W   F
Sbjct: 465  SFLAYHWCKGDNAILADEMGLGKTVQTVSFMNWLRHDRGQQGPFVVVVPLSTLPAWAETF 524

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WAP++N V Y+G   +R IIR+YE      D   K+T   KF+VLLTTYE +LADS+ 
Sbjct: 525  DNWAPDMNYVVYNGNEASRKIIREYEMLV---DGNPKRT---KFHVLLTTYEFVLADSTF 578

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L  + W+ + VDE HRLKN  S+L++ L  F    R+L+TGTP+QN +GE+  L++F+ P
Sbjct: 579  LSQIKWQFMAVDEAHRLKNRESQLYAKLMDFGAPSRLLITGTPMQNTLGELSALMDFIMP 638

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
                   + +      T +QK+ EL   ++P+M+RR K+    ++PPKTE+++ VELS +
Sbjct: 639  GMIEVDENID--LQSETASQKIAELTNAISPYMIRRTKQKVENDLPPKTEKIIRVELSDL 696

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHE 1064
            Q EYY+ +LT+NY  L   GKG  +QS+LNI+M+L+K  NHPY+ PG E    +  +  E
Sbjct: 697  QLEYYKNILTRNYAALNQNGKG-PKQSLLNIMMELKKASNHPYMFPGAEERMLAGNYRRE 755

Query: 1065 MRIKA----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             ++KA    S K+ LL  +L  L K+ HRVL+FSQM K+LDIL DYL +      ++R+D
Sbjct: 756  EQLKALVTSSGKMMLLDRLLTKLKKDNHRVLVFSQMVKMLDILGDYLQLR--GYQFQRLD 813

Query: 1121 GSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++ G R+ AI  FN QD   F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QAM
Sbjct: 814  GTITSGQRRQAIDHFNAQDSQDFCFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAM 873

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQK 1228
             RAHRIGQ   + VYRLV + +VEE +L+ A+ KLML+ + + ++ + K
Sbjct: 874  ARAHRIGQKNPVTVYRLVSKDTVEEEVLERARNKLMLEYITIQRAVTDK 922


>gi|171687883|ref|XP_001908882.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943903|emb|CAP69555.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1700

 Score =  484 bits (1247), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 277/658 (42%), Positives = 390/658 (59%), Gaps = 67/658 (10%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKY----------GTTVINICD 658
            +E+ +KW  KS++H++W  E+   V   R   +LENY  K           G  V     
Sbjct: 299  FEYFIKWQNKSHLHDTW--ETTATVAGYRGFRRLENYYRKVVEYDIEMRLGGDDVSPEQR 356

Query: 659  ERW--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEK 704
            E+W               + +R++ +R   + T E  VKW GL YD+CTWE ++    E+
Sbjct: 357  EQWLLDREREEEALADYTKVERIVHVREGDEET-EYLVKWKGLQYDDCTWE-VESLVSEQ 414

Query: 705  YSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEAL 764
                 D +    +++ + D  E  L        +S +  L EQP+ ++GG L   QL+ L
Sbjct: 415  AQDKIDQYTARSQRSWQSDRKETNLE------TRSRMEKLEEQPDYIQGGQLREFQLKGL 468

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            N+L   W +  NVILADEMGLGKTV   +F+S L  E   + P LV+ PLS +P W   F
Sbjct: 469  NFLALNWTRGNNVILADEMGLGKTVQTVSFLSWLRNERGQEGPFLVVAPLSVIPAWCDTF 528

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              W+P++N V Y G   AR+ IR+YE      D   KK    KFNVL+T+Y+ ILAD+ H
Sbjct: 529  NHWSPDINYVVYLGPEAARSNIREYELFV---DGNPKKP---KFNVLVTSYDYILADADH 582

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L+G+ W+VL VDE HRLKN  S+L+  LN F    +VL+TGTP+QNN+ E+  LL+FL P
Sbjct: 583  LKGIKWQVLAVDEAHRLKNRESQLYVKLNGFGIPSKVLITGTPIQNNLAELAALLDFLNP 642

Query: 945  ------------ASFPSLSSFEEKFND---LTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
                        ++  S    +E+ ++   L T  K+++L K +AP +LRR K+    ++
Sbjct: 643  GKVLIDEELELLSTADSKEPVDEQLDEAKRLKTQAKLQDLHKSIAPFILRRTKETVESDL 702

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            PPKTE+++ VELS +Q EYY+ +LT+NY  L +   G  +QS+LNI+M+L+KV NHPY+ 
Sbjct: 703  PPKTEKIIRVELSDLQLEYYKNILTRNYAALSDASNG-HKQSLLNIMMELKKVSNHPYMF 761

Query: 1050 PGTEP-----DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILE 1104
             G E       SG  E   +  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL 
Sbjct: 762  QGAEERVLANGSGRREDAVKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVKMLDILA 821

Query: 1105 DYLNIEFGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTV 1163
            DYL I      ++R+DG++  G R+ AI  FN +D   F FLLSTR+ GLGINL TADTV
Sbjct: 822  DYLRIR--GYQFQRLDGTIPAGPRRLAINHFNAEDSDDFCFLLSTRAGGLGINLMTADTV 879

Query: 1164 IIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            IIYDSD+NP AD+QAM RAHRIGQ + + VYRLV + ++EE +++ A+ KL L+ L +
Sbjct: 880  IIYDSDWNPQADLQAMARAHRIGQKRPVNVYRLVAKQTIEEEVVKRARNKLFLEYLTI 937


>gi|116180352|ref|XP_001220025.1| hypothetical protein CHGG_00804 [Chaetomium globosum CBS 148.51]
 gi|88185101|gb|EAQ92569.1| hypothetical protein CHGG_00804 [Chaetomium globosum CBS 148.51]
          Length = 1644

 Score =  484 bits (1247), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 282/661 (42%), Positives = 385/661 (58%), Gaps = 74/661 (11%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKY----------GTTVINICDER 660
            +EF +KW GKS++HN+W     +      R+LENY  K           G  +     E+
Sbjct: 292  FEFFIKWQGKSHLHNTWESTDTVAGFRGFRRLENYYKKMVEYELDLKFGGDEISPEQREQ 351

Query: 661  WK--------------QPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYS 706
            W               + +R++S+R   D   E  VKW GL YD+CTWE     A     
Sbjct: 352  WSLDREREEEALEDYTKVERIVSVRDG-DEDLEYLVKWKGLQYDDCTWED----ATVISG 406

Query: 707  HLTDLFVQF------ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQ 760
            H  D   QF        Q+ +++A+ D          +S +  L +QP  +  G L   Q
Sbjct: 407  HAQDKIDQFLDRSSRSWQSDRREANPD---------TRSRMTKLEQQPSYVTNGELREFQ 457

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            L+ LN+L   W +  NVILADEMGLGKTV   +F+S L  +   + P LV+ PLS +P W
Sbjct: 458  LKGLNFLALNWTRGNNVILADEMGLGKTVQTVSFLSWLRNDRGQEGPFLVVAPLSVIPAW 517

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
               F  WAP++N V Y G   ARA IR++E      D   KKT   KFNVL+T+Y+ ILA
Sbjct: 518  CDTFNHWAPDINYVVYLGPEAARASIREHELFV---DGNPKKT---KFNVLVTSYDYILA 571

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D+ +L+G+ W+VL VDE HRLKN  S+L+  LNSF    RVL+TGTP+QNN+ E+  LL+
Sbjct: 572  DAENLKGIKWQVLAVDEAHRLKNRESQLYHKLNSFGIPCRVLITGTPIQNNLAELSALLD 631

Query: 941  FLQPA------SFPSLSSFEEK---------FNDLTTTQKVEELKKLVAPHMLRRLKKDA 985
            FL P           LSS + K              T +K+ EL   +AP +LRR K+  
Sbjct: 632  FLNPGKVLIDEELELLSSADNKEVADEEQSEAKRKKTQEKLRELHTSIAPFILRRTKETV 691

Query: 986  MQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNH 1045
              ++PPKTE+++ VELS +Q EYY+ +LT+NY  LR+   G  +QS+LNI+M+L+KV NH
Sbjct: 692  ESDLPPKTEKIIRVELSDVQLEYYKNILTRNYAALRDASNG-HKQSLLNIMMELKKVSNH 750

Query: 1046 PYLIPGTEPD--SGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLD 1101
            PY+  G E    +GS     +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LD
Sbjct: 751  PYMFAGAEERVLAGSSRREDQIKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVKMLD 810

Query: 1102 ILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATA 1160
            IL DYL +      ++R+DG++  G R+ AI  FN D S  F FLLSTR+ GLGINL TA
Sbjct: 811  ILGDYLRVR--GYQFQRLDGTIPAGPRRMAINHFNADDSDDFCFLLSTRAGGLGINLMTA 868

Query: 1161 DTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF 1220
            DTVIIYDSD+NP AD+QAM RAHRIGQ + + VYRLV + ++EE ++  A+ KL L+ L 
Sbjct: 869  DTVIIYDSDWNPQADLQAMARAHRIGQKRPVNVYRLVAKQTIEEEVVNRARNKLFLEYLT 928

Query: 1221 V 1221
            +
Sbjct: 929  I 929


>gi|322706938|gb|EFY98517.1| chromo domain-containing protein 1 [Metarhizium anisopliae ARSEF 23]
          Length = 1668

 Score =  484 bits (1247), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 273/642 (42%), Positives = 394/642 (61%), Gaps = 53/642 (8%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVINI-------------- 656
            +E+ +KW GKS++H++W   ES   +   RK+ENY  K     ++I              
Sbjct: 307  FEYFIKWQGKSHLHDTWETIESLRNMRGFRKVENYFRKVVEQELDIRFGDDIPPETKEQF 366

Query: 657  ---------CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                       E + + +RV+++R  +D T E +VKW GL Y+ECTWE   E + E +  
Sbjct: 367  FLDRERDEDAFEDYTKVERVVNVRDGEDDT-EYYVKWKGLTYEECTWELASEISPE-FQD 424

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D ++    ++ + D  E   P  +G      ++ L  QP  ++GG L   QL+ LN+L
Sbjct: 425  KIDQYLDRSSRSWQSDRRETN-PDTRG-----RMIKLDSQPSYIQGGELRSFQLKGLNFL 478

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W +  NVILADEMGLGKTV   +F+S L  + + + P LV+ PLS +P W   F  W
Sbjct: 479  CLNWTRGNNVILADEMGLGKTVQTVSFLSWLRNDRRQEGPSLVVAPLSVIPAWCDTFNHW 538

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            AP++N V Y G   AR IIR+ E      D   KK    KFNVL+T+YE IL D   L+ 
Sbjct: 539  APDINYVVYLGPEDARNIIRENELIV---DGNPKKP---KFNVLVTSYEFILQDWQFLQT 592

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ L VDE HRLKN  S+L++ L  F    ++L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 593  IKWQTLAVDEAHRLKNRESQLYARLVGFGVPCKILITGTPIQNNLAELSALLDFLNPGKV 652

Query: 948  PSLSSFEEKFNDLTTT---QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
                + +E  + L+     +K+EEL K +AP++LRR K+    ++PPKTE+++ VELS +
Sbjct: 653  ----NIDEDLDSLSAVDAQEKLEELHKSIAPYILRRTKETVESDLPPKTEKIIRVELSDV 708

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFL 1062
            Q +YY+ +LT+NY  L +   G  + S+LNI+M+L+K+ NHPY+ PG E    +GSV   
Sbjct: 709  QLDYYKNILTRNYSALCD-ATGGHKNSLLNIMMELKKISNHPYMFPGAEERVLAGSVRRE 767

Query: 1063 HEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL DYL++  G K ++R+D
Sbjct: 768  DQIKGLITSSGKMMLLDQLLSKLKKDGHRVLIFSQMVKMLDILGDYLSLR-GYK-FQRLD 825

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++ G R+ AI  FN D S  F FLLSTR+ GLGINL TADTVII+DSD+NP AD+QAM
Sbjct: 826  GTIAAGPRRMAINHFNADDSEDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAM 885

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
             RAHRIGQ + + +YRLV + +VEE +L+ A+ KL+L+ L +
Sbjct: 886  ARAHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTI 927


>gi|401840653|gb|EJT43386.1| CHD1-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 1468

 Score =  484 bits (1247), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 288/686 (41%), Positives = 405/686 (59%), Gaps = 72/686 (10%)

Query: 611  SYEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY-------------GTTVINI 656
            +YEFL+KW  +S++HN+W   ES  +V   ++L+NY  ++                 I +
Sbjct: 210  NYEFLIKWTDESHLHNTWETYESIGQVRGLKRLDNYCKQFIIEDQQIRLDPYVTAEDIEV 269

Query: 657  CDERWKQ----------PQRVI-SLRSS-KDGTRE--AFVKWTGLPYDECTWEKLDEPAL 702
             D   ++          P+R+I S RSS +DGT +    VKW  L YDE TWE       
Sbjct: 270  MDMERERRLEEFEEFHVPERIIDSQRSSLEDGTSQLQYLVKWRRLNYDEATWE------- 322

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDE---LPRGKGD--CQQSEIVALTEQPEELKGGALF 757
                + TD+ V+   + +K+  + +    LP+   +   Q+     L+ QP  +KGG L 
Sbjct: 323  ----NATDI-VKLAPEQVKQFQNRENSKILPQYSSNYTSQRPRFEKLSVQPPFIKGGELR 377

Query: 758  PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTM 817
              QL  +NW+   W K  N ILADEMGLGKTV   AFIS L    +   P +++VPLSTM
Sbjct: 378  DFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTM 437

Query: 818  PNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEM 877
            P WL  F  W+P+LN + Y G  K+R  IR+YE++ ++P    KKT   KFNVLLTTYE 
Sbjct: 438  PAWLDTFEKWSPDLNCICYMGNQKSRDTIREYEFY-TNPQAKGKKT--MKFNVLLTTYEY 494

Query: 878  ILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYN 937
            IL D + L G+ W+ + VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  
Sbjct: 495  ILKDRAELGGIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAA 554

Query: 938  LLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            L+NFL P  F      + +  D    + + +L + + P +LRRLKKD  +++P KTER++
Sbjct: 555  LVNFLMPGRFTIDQEIDFENQDAEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERIL 614

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP--- 1054
             VELS +Q EYY+ +LTKNY  L    KG    S+LNI+ +L+K  NHPYL    E    
Sbjct: 615  RVELSDVQTEYYKNILTKNYSALTAGAKG-GHFSLLNIMNELKKASNHPYLFDNAEERVL 673

Query: 1055 ---DSGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
                 G +   + +R  I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I
Sbjct: 674  QKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSI 733

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDS 1168
            +     ++R+DG+V    R+ +I  FN  D + FVFLLSTR+ GLGINL TADTV+I+DS
Sbjct: 734  K--GINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDS 791

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------- 1221
            D+NP AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   +       
Sbjct: 792  DWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDG 851

Query: 1222 NKSGSQK-----EVEDILRWGTEELF 1242
            NK   +      E+  IL++G   +F
Sbjct: 852  NKYTKKNEPNAGELSAILKFGAGNMF 877


>gi|342866497|gb|EGU72158.1| hypothetical protein FOXB_17402 [Fusarium oxysporum Fo5176]
          Length = 2124

 Score =  484 bits (1247), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 272/642 (42%), Positives = 392/642 (61%), Gaps = 53/642 (8%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKYGTTVINI-------------- 656
            +E+ +KW GKS++H++W     ++     RK+ENY  K     ++I              
Sbjct: 290  FEYFIKWQGKSHLHDTWETFQDIRDYRGYRKVENYFRKVIEYEVDIRVGDDIPPETKEQF 349

Query: 657  ---------CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                       E + + +RV+++R  +D T E  VKW GL Y+ECTWE   E + + +  
Sbjct: 350  FLDRERDEEAFEDYTKVERVVAVRDGEDDT-EYLVKWKGLTYEECTWEVASEIS-DAFQD 407

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D ++    ++ + D  E  L        +S +V L EQP+ +KGG L   QL  LN+L
Sbjct: 408  QIDQYLDRASRSWQSDRKETNLD------TRSRMVKLEEQPDFIKGGELRNFQLRGLNFL 461

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K  NVILADEMGLGKTV   +F+S L    + + P LV+ PLS +P W   F  W
Sbjct: 462  CLNWTKGNNVILADEMGLGKTVQTVSFLSWLRNARRQEGPSLVVAPLSVIPAWCDTFNHW 521

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            +P++N V Y G   AR IIR++E      D   KK    KFNVL+T+YE IL D   L+ 
Sbjct: 522  SPDINYVVYLGPEDARKIIREHELLV---DGNPKKP---KFNVLVTSYEFILQDWQFLQS 575

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ L VDE HRLKN  S+L++ L SF    ++L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 576  IKWQTLAVDEAHRLKNRESQLYNRLVSFGIPCKILITGTPIQNNLAELSALLDFLNPGKV 635

Query: 948  PSLSSFEEKFNDLTTT---QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
                  +E  + L+ +   +K+++L K +AP +LRR K+    ++PPKTE+++ VELS +
Sbjct: 636  ----DIDEDLDSLSASDAQEKLQQLHKAIAPFILRRTKETVESDLPPKTEKIIRVELSDV 691

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFL 1062
            Q EYY+ +LT+NY  L +   G  + S+LNI+M+L+K+ NHPY+ PG E    +GSV   
Sbjct: 692  QLEYYKNILTRNYTALCDATNG-HKNSLLNIMMELKKISNHPYMFPGAEEKVLAGSVRRE 750

Query: 1063 HEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL DY ++  G K ++R+D
Sbjct: 751  DQIKGLIASSGKMMLLDQLLSKLNKDGHRVLIFSQMVKMLDILGDYCSLR-GYK-FQRLD 808

Query: 1121 GSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++ G R+ AI  FN D S  F FLLSTR+ GLGINL TADTVII+DSD+NP AD+QAM
Sbjct: 809  GTIAAGPRRMAINHFNADDSDDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAM 868

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
             RAHRIGQ + + +YRLV + +VEE +L+ A+ KL+L+ L +
Sbjct: 869  ARAHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTI 910


>gi|322701089|gb|EFY92840.1| chromo domain-containing protein 1 [Metarhizium acridum CQMa 102]
          Length = 1663

 Score =  484 bits (1247), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 273/642 (42%), Positives = 393/642 (61%), Gaps = 53/642 (8%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVINI-------------- 656
            +E+ +KW GKS++H++W   ES   +   RK+ENY  K     ++I              
Sbjct: 319  FEYFIKWQGKSHLHDTWETIESLRNMRGFRKVENYFRKVVEQELDIRFGDDIPPETKEQF 378

Query: 657  ---------CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                       E + + +RV+++R  +D T E +VKW GL Y+ECTWE   E + E +  
Sbjct: 379  FLDRERDEDAFEDYTKVERVVNVRDGEDDT-EYYVKWKGLTYEECTWELASEISPE-FQD 436

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D ++    ++ + D  E   P  +G      ++ L  QP  ++GG L   QL+ LN+L
Sbjct: 437  KIDQYLDRSSRSWQSDRRETN-PDTRG-----RMIKLDSQPSYIQGGELRSFQLKGLNFL 490

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W +  NVILADEMGLGKTV   +F+S L  + + + P LV+ PLS +P W   F  W
Sbjct: 491  CLNWTRGNNVILADEMGLGKTVQTVSFLSWLRNDRRQEGPSLVVAPLSVIPAWCDTFNHW 550

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            AP++N V Y G   AR IIR+ E      D   KK    KFNVL+T+YE IL D   L+ 
Sbjct: 551  APDINYVVYLGPEDARNIIRENELIV---DGNPKKP---KFNVLVTSYEFILQDWQFLQT 604

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ L VDE HRLKN  S+L++ L  F    ++L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 605  IKWQTLAVDEAHRLKNRESQLYARLLGFGVPCKILITGTPIQNNLAELSALLDFLNPGKV 664

Query: 948  PSLSSFEEKFNDLTTT---QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
                  +E  + L+     +K+EEL K +AP++LRR K+    ++PPKTE+++ VELS +
Sbjct: 665  ----DIDEDLDSLSAVDAQEKLEELHKSIAPYILRRTKETVESDLPPKTEKIIRVELSDV 720

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFL 1062
            Q +YY+ +LT+NY  L +   G  + S+LNI+M+L+K+ NHPY+ PG E    +GSV   
Sbjct: 721  QLDYYKNILTRNYSALCD-ATGGHKNSLLNIMMELKKISNHPYMFPGAEERVLAGSVRRE 779

Query: 1063 HEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL DYL++  G K ++R+D
Sbjct: 780  DQIKGLITSSGKMMLLDQLLSKLKKDGHRVLIFSQMVKMLDILGDYLSLR-GYK-FQRLD 837

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++ G R+ AI  FN D S  F FLLSTR+ GLGINL TADTVII+DSD+NP AD+QAM
Sbjct: 838  GTIAAGPRRMAINHFNADDSEDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAM 897

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
             RAHRIGQ + + +YRLV + +VEE +L+ A+ KL+L+ L +
Sbjct: 898  ARAHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTI 939


>gi|350296614|gb|EGZ77591.1| hypothetical protein NEUTE2DRAFT_134735 [Neurospora tetrasperma FGSC
            2509]
          Length = 1664

 Score =  484 bits (1246), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 278/658 (42%), Positives = 391/658 (59%), Gaps = 68/658 (10%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY----------GTTVINICDER 660
            +E+ +KW G+S  HN+W   E+       R+LENY  K           G  +     E+
Sbjct: 297  FEYFIKWQGQSYPHNTWETTETVAGFRGFRRLENYYKKVVEYELEMQFGGDDISPEQKEQ 356

Query: 661  W--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK---LDEPALE 703
            W               + +RV+++R   +GT E ++KW GL YDECTWE    + E A +
Sbjct: 357  WYLDREREQEALEDYTKVERVVAVRDGDEGT-EYYIKWKGLQYDECTWEAESLVAELAQD 415

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEA 763
            K     D       Q+ +K  + D          +S +  L +QP+ +KGG L   Q++ 
Sbjct: 416  KIDQFLDR-CNRSWQSDRKQTNPD---------TRSRMTKLEKQPDYIKGGELREFQMKG 465

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LN+L   W +  NVILADEMGLGKTV + +F+S L  E   + P LV+ PLS +P W   
Sbjct: 466  LNFLALNWVRGNNVILADEMGLGKTVQSVSFLSWLRNERGQEGPFLVVAPLSVIPAWCDT 525

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F  WAP+LN V Y G   AR+ IR YE      D   KKT   KFNVL+T+Y+ ILAD+ 
Sbjct: 526  FNHWAPDLNYVVYLGPEAARSNIRDYELFV---DGNPKKT---KFNVLVTSYDYILADAD 579

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
            HL+ + W+VL VDE HRLKN  S+L+  LN+F    +VL+TGTP+QNN+ E+  LL+FL 
Sbjct: 580  HLKNIKWQVLAVDEAHRLKNRESQLYIKLNNFGVPCKVLITGTPIQNNLAELSALLDFLN 639

Query: 944  PA------SFPSLSSFEEK---------FNDLTTTQKVEELKKLVAPHMLRRLKKDAMQN 988
            P          +LS+ + K            + T +K+ EL + +AP +LRR K+    +
Sbjct: 640  PGKVVIDEELEALSTADNKGPTDEEQDEARRIRTQEKLRELHQSIAPFILRRTKETVESD 699

Query: 989  IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYL 1048
            +PPKTE+++ VELS +Q +YY+ +LT+NY  L +   G  +QS+LNI+M+L+KV NHPY+
Sbjct: 700  LPPKTEKIIRVELSDVQLDYYKNILTRNYAALSDASNG-HKQSLLNIMMELKKVSNHPYM 758

Query: 1049 IPGTEPD--SGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILE 1104
              G E    +GS     +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL 
Sbjct: 759  FQGAEERVLNGSTRREDQIKGLITSSGKMMLLDQLLAKLRKDGHRVLIFSQMVKMLDILG 818

Query: 1105 DYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTV 1163
            DYL +      ++R+DG++  G R+ AI  FN + S  F FLLSTR+ GLGINL TADTV
Sbjct: 819  DYLRVR--GYQFQRLDGTIPAGPRRMAINHFNAEGSDDFCFLLSTRAGGLGINLMTADTV 876

Query: 1164 IIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            IIYDSD+NP AD+QAM RAHRIGQ + + VYRLV + ++EE +++ A+ KL L+ L +
Sbjct: 877  IIYDSDWNPQADLQAMARAHRIGQKRPVNVYRLVAKQTIEEEVVKRARNKLFLEYLTI 934


>gi|336267056|ref|XP_003348294.1| hypothetical protein SMAC_02791 [Sordaria macrospora k-hell]
 gi|380091948|emb|CCC10214.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1667

 Score =  484 bits (1246), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 274/661 (41%), Positives = 393/661 (59%), Gaps = 74/661 (11%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY----------GTTVINICDER 660
            + + +KW G+S+ HN+W   E+       R+LENY  K           G  +     E+
Sbjct: 300  FAYFIKWQGQSHSHNTWETTETVAGFRGFRRLENYYKKVVEYELEMQFGGDDISPEQKEQ 359

Query: 661  W--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE------KLDEP 700
            W               + +RV+++R   +GT E ++KW GL YDECTWE      KL + 
Sbjct: 360  WYLDREREQEALADYTKVERVVAVRDGDEGT-EYYIKWKGLQYDECTWEAESLVTKLAQD 418

Query: 701  ALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQ 760
             ++++   ++   Q +R+    D              +S +  L +QP+ +KGG L   Q
Sbjct: 419  KIDQFIDRSNRSWQSDRKQTNPDT-------------RSRMTKLEKQPDYIKGGELREFQ 465

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            ++ LN+L   W +  NVILADEMGLGKTV + +F+S L  E   + P LV+ PLS +P W
Sbjct: 466  MKGLNFLALNWVRGNNVILADEMGLGKTVQSVSFLSWLRNERGQEGPFLVVAPLSVIPAW 525

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
               F  WAP++N V Y G   AR+ IR YE      D   KKT   KFNVL+T+Y+ ILA
Sbjct: 526  CDTFNHWAPDINYVVYLGPEAARSNIRDYELFV---DGNPKKT---KFNVLVTSYDYILA 579

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D+ HL+ + W+VL VDE HRLKN  S+L+  LN+F    +VL+TGTP+QNN+ E+  LL+
Sbjct: 580  DADHLKNIKWQVLAVDEAHRLKNRESQLYIKLNNFGVPCKVLITGTPIQNNLAELSALLD 639

Query: 941  FLQPA------SFPSLSSFEEK---------FNDLTTTQKVEELKKLVAPHMLRRLKKDA 985
            FL P          +LS+ + K            + T +K+ EL + +AP +LRR K+  
Sbjct: 640  FLNPGKVVIDEELEALSTADSKGPTDEEQDEARRIRTQEKLRELHQSIAPFILRRTKETV 699

Query: 986  MQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNH 1045
              ++PPKTE+++ VELS +Q +YY+ +LT+NY  L +   G  +QS+LNI+M+L+KV NH
Sbjct: 700  ESDLPPKTEKIIRVELSDVQLDYYKNILTRNYAALSDASNG-HKQSLLNIMMELKKVSNH 758

Query: 1046 PYLIPGTEPD--SGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLD 1101
            PY+  G E    +GS     +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LD
Sbjct: 759  PYMFQGAEERVLNGSTRREDQIKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVKMLD 818

Query: 1102 ILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATA 1160
            IL DYL +      ++R+DG++  G R+ AI  FN + S  F FLLSTR+ GLGINL TA
Sbjct: 819  ILGDYLRVR--GYQFQRLDGTIPAGPRRMAINHFNAEGSDDFCFLLSTRAGGLGINLMTA 876

Query: 1161 DTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF 1220
            DTVIIYDSD+NP AD+QAM RAHRIGQ + + VYRLV + ++EE +++ A+ KL L+ L 
Sbjct: 877  DTVIIYDSDWNPQADLQAMARAHRIGQKRPVNVYRLVAKQTIEEEVVKRARNKLFLEYLT 936

Query: 1221 V 1221
            +
Sbjct: 937  I 937


>gi|365760981|gb|EHN02659.1| Chd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 1468

 Score =  484 bits (1246), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 288/686 (41%), Positives = 405/686 (59%), Gaps = 72/686 (10%)

Query: 611  SYEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY-------------GTTVINI 656
            +YEFL+KW  +S++HN+W   ES  +V   ++L+NY  ++                 I +
Sbjct: 210  NYEFLIKWTDESHLHNTWETYESIGQVRGLKRLDNYCKQFIIEDQQIRLDPYVTAEDIEV 269

Query: 657  CDERWKQ----------PQRVI-SLRSS-KDGTRE--AFVKWTGLPYDECTWEKLDEPAL 702
             D   ++          P+R+I S RSS +DGT +    VKW  L YDE TWE       
Sbjct: 270  MDMERERRLEEFEEFHVPERIIDSQRSSLEDGTSQLQYLVKWRRLNYDEATWE------- 322

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDE---LPRGKGD--CQQSEIVALTEQPEELKGGALF 757
                + TD+ V+   + +K+  + +    LP+   +   Q+     L+ QP  +KGG L 
Sbjct: 323  ----NATDI-VKLAPEQVKQFQNRENSKILPQYSSNYTSQRPRFEKLSVQPPFIKGGELR 377

Query: 758  PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTM 817
              QL  +NW+   W K  N ILADEMGLGKTV   AFIS L    +   P +++VPLSTM
Sbjct: 378  DFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTM 437

Query: 818  PNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEM 877
            P WL  F  W+P+LN + Y G  K+R  IR+YE++ ++P    KKT   KFNVLLTTYE 
Sbjct: 438  PAWLDTFEKWSPDLNCICYMGNQKSRDTIREYEFY-TNPQAKGKKT--MKFNVLLTTYEY 494

Query: 878  ILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYN 937
            IL D + L G+ W+ + VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  
Sbjct: 495  ILKDRAELGGIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAA 554

Query: 938  LLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            L+NFL P  F      + +  D    + + +L + + P +LRRLKKD  +++P KTER++
Sbjct: 555  LVNFLMPGRFTIDQEIDFENQDAEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERIL 614

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP--- 1054
             VELS +Q EYY+ +LTKNY  L    KG    S+LNI+ +L+K  NHPYL    E    
Sbjct: 615  RVELSDVQTEYYKNILTKNYSALTAGAKG-GHFSLLNIMNELKKASNHPYLFDNAEERVL 673

Query: 1055 ---DSGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
                 G +   + +R  I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I
Sbjct: 674  QKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSI 733

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDS 1168
            +     ++R+DG+V    R+ +I  FN  D + FVFLLSTR+ GLGINL TADTV+I+DS
Sbjct: 734  K--GINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDS 791

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------- 1221
            D+NP AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   +       
Sbjct: 792  DWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDG 851

Query: 1222 NKSGSQK-----EVEDILRWGTEELF 1242
            NK   +      E+  IL++G   +F
Sbjct: 852  NKYTKKNEPNAGELSAILKFGAGNMF 877


>gi|336464523|gb|EGO52763.1| hypothetical protein NEUTE1DRAFT_54802 [Neurospora tetrasperma FGSC
            2508]
          Length = 1664

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 278/658 (42%), Positives = 391/658 (59%), Gaps = 68/658 (10%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY----------GTTVINICDER 660
            +E+ +KW G+S  HN+W   E+       R+LENY  K           G  +     E+
Sbjct: 297  FEYFIKWQGQSYPHNTWETTETVAGFRGFRRLENYYKKVVEYELEMQFGGDDISPEQKEQ 356

Query: 661  W--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK---LDEPALE 703
            W               + +RV+++R   +GT E ++KW GL YDECTWE    + E A +
Sbjct: 357  WYLDREREQEALEDYTKVERVVAVRDGDEGT-EYYIKWKGLQYDECTWEAESLVAELAQD 415

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEA 763
            K     D       Q+ +K  + D          +S +  L +QP+ +KGG L   Q++ 
Sbjct: 416  KIDQFLDR-CNRSWQSDRKQTNPD---------TRSRMTKLEKQPDYIKGGELREFQMKG 465

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LN+L   W +  NVILADEMGLGKTV + +F+S L  E   + P LV+ PLS +P W   
Sbjct: 466  LNFLALNWVRGNNVILADEMGLGKTVQSVSFLSWLRNERGQEGPFLVVAPLSVIPAWCDT 525

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F  WAP+LN V Y G   AR+ IR YE      D   KKT   KFNVL+T+Y+ ILAD+ 
Sbjct: 526  FNHWAPDLNYVVYLGPEAARSNIRGYELFV---DGNPKKT---KFNVLVTSYDYILADAD 579

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
            HL+ + W+VL VDE HRLKN  S+L+  LN+F    +VL+TGTP+QNN+ E+  LL+FL 
Sbjct: 580  HLKNIKWQVLAVDEAHRLKNRESQLYIKLNNFGVPCKVLITGTPIQNNLAELSALLDFLN 639

Query: 944  PA------SFPSLSSFEEK---------FNDLTTTQKVEELKKLVAPHMLRRLKKDAMQN 988
            P          +LS+ + K            + T +K+ EL + +AP +LRR K+    +
Sbjct: 640  PGKVVIDEELEALSTADNKGPTDEEQDEARRIRTQEKLRELHQSIAPFILRRTKETVESD 699

Query: 989  IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYL 1048
            +PPKTE+++ VELS +Q +YY+ +LT+NY  L +   G  +QS+LNI+M+L+KV NHPY+
Sbjct: 700  LPPKTEKIIRVELSDVQLDYYKNILTRNYAALSDASNG-HKQSLLNIMMELKKVSNHPYM 758

Query: 1049 IPGTEPD--SGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILE 1104
              G E    +GS     +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL 
Sbjct: 759  FQGAEERVLNGSTRREDQIKGLITSSGKMMLLDQLLAKLRKDGHRVLIFSQMVKMLDILG 818

Query: 1105 DYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTV 1163
            DYL +      ++R+DG++  G R+ AI  FN + S  F FLLSTR+ GLGINL TADTV
Sbjct: 819  DYLRVR--GYQFQRLDGTIPAGPRRMAINHFNAEGSDDFCFLLSTRAGGLGINLMTADTV 876

Query: 1164 IIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            IIYDSD+NP AD+QAM RAHRIGQ + + VYRLV + ++EE +++ A+ KL L+ L +
Sbjct: 877  IIYDSDWNPQADLQAMARAHRIGQKRPVNVYRLVAKQTIEEEVVKRARNKLFLEYLTI 934


>gi|401625980|gb|EJS43951.1| chd1p [Saccharomyces arboricola H-6]
          Length = 1470

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 288/686 (41%), Positives = 403/686 (58%), Gaps = 72/686 (10%)

Query: 611  SYEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY-------------GTTVINI 656
            +YEFL+KW  +S++HN+W   ES  ++   ++L+NY  ++                 I I
Sbjct: 212  NYEFLIKWTDESHLHNTWETYESIGQIRGLKRLDNYCKQFIIEDQQVRLDPYVTAEDIEI 271

Query: 657  CD----------ERWKQPQRVI-SLRSS-KDGTRE--AFVKWTGLPYDECTWEKLDEPAL 702
             D          E +  P+R+I S R+S  DGT +    VKW  L YDE TWE       
Sbjct: 272  MDMERERRLDELEEFHIPERIIDSQRTSLDDGTSQLQYLVKWRRLNYDEATWE------- 324

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDE---LPRGKGD--CQQSEIVALTEQPEELKGGALF 757
                + TD+ V+   + +K+  + +    LP+   +   Q+     L+ QP  +KGG L 
Sbjct: 325  ----NATDI-VKLAPEQVKQFQNRENSKILPQYSSNYTSQRPRFEKLSVQPPFIKGGELR 379

Query: 758  PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTM 817
              QL  +NW+   W K  N ILADEMGLGKTV   AFIS L    +   P +++VPLSTM
Sbjct: 380  DFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTM 439

Query: 818  PNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEM 877
            P WL  F  WAP+LN + Y G  K+R  IR+YE++ ++P    KKT   KFNVLLTTYE 
Sbjct: 440  PAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFY-TNPQAKGKKT--MKFNVLLTTYEY 496

Query: 878  ILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYN 937
            IL D + L  + W+ + VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  
Sbjct: 497  ILKDRAELGSIKWQYMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAA 556

Query: 938  LLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            L+NFL P  F      + +  D    + + +L + + P +LRRLKKD  +++P KTER++
Sbjct: 557  LVNFLMPGRFTIDQEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERIL 616

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP--- 1054
             VELS +Q EYY+ +LTKNY  L    KG    S+LNI+ +L+K  NHPYL    E    
Sbjct: 617  RVELSDVQTEYYKNILTKNYSALTAGAKG-GHFSLLNIMNELKKASNHPYLFDNAEERVL 675

Query: 1055 ---DSGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
                 G +   + +R  I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I
Sbjct: 676  QKFGDGKMTRENILRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSI 735

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDS 1168
            +     ++R+DG+V    R+ +I  FN  D + FVFLLSTR+ GLGINL TADTV+I+DS
Sbjct: 736  K--GINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDS 793

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------- 1221
            D+NP AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   +       
Sbjct: 794  DWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDG 853

Query: 1222 NKSGSQK-----EVEDILRWGTEELF 1242
            NK   +      E+  IL++G   +F
Sbjct: 854  NKYTKKNEPNAGELSAILKFGAGNMF 879


>gi|358391497|gb|EHK40901.1| hypothetical protein TRIATDRAFT_227075 [Trichoderma atroviride IMI
            206040]
          Length = 1659

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 270/642 (42%), Positives = 393/642 (61%), Gaps = 53/642 (8%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKYGTTVINI-------------- 656
            +E+ +KW GKS++H++W     L+     RK+ENY  K+    ++I              
Sbjct: 306  FEYFIKWQGKSHLHDTWESLDALRNTRGFRKVENYFRKFVDQELDIRFGDDVPPETKEQF 365

Query: 657  ---------CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                       E + + +RV+++R  ++G  E ++KW GL Y+ECTWE + E +   +  
Sbjct: 366  FLDRERDEEALEDYTKVERVVAVRDGEEGD-EYYIKWKGLTYEECTWESVSEIS-PLFQD 423

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    ++   D  E           +S++  L +QPE + GG L   QL+ LN+L
Sbjct: 424  KIDQFLDRSSRSWLSDRKE------TNPDTRSKMTKLEKQPEFIVGGELREFQLKGLNFL 477

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W +S NVILADEMGLGKTV   +F+S L    + + P LV+ PLS +P W   F  W
Sbjct: 478  CLNWTRSNNVILADEMGLGKTVQTVSFLSWLRNARRQEGPSLVVAPLSVIPAWCDTFNNW 537

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            +P++N V Y G   AR IIR+ E         N K    KFNVL+T+YE IL D   L+ 
Sbjct: 538  SPDVNYVVYLGPEDARNIIRENELLVGG----NPKKP--KFNVLVTSYEFILQDWQFLQS 591

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+VL VDE HRLKNS S+L+  L  F    +VL+TGTP+QNN+ E+  LL+FL P   
Sbjct: 592  IKWQVLAVDEAHRLKNSESQLYQRLVGFGVPCKVLITGTPIQNNLAELSALLDFLNPGKV 651

Query: 948  PSLSSFEEKFNDLTTT---QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
                S +E  + L+     +K++EL + +AP++LRR K+    ++PPKTE+++ VELS +
Sbjct: 652  ----SIDEDLDSLSAVDAQEKLQELHRSIAPYILRRTKETVESDLPPKTEKIIRVELSDV 707

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFL 1062
            Q +YY+ +LT+NY  L +   G  + S+LNI+M+L+KV NHPY+ PG E    +GSV   
Sbjct: 708  QLDYYKNILTRNYSALCDATSG-HKNSLLNIMMELKKVSNHPYMFPGAEERVLAGSVRRE 766

Query: 1063 HEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL DYL++  G K ++R+D
Sbjct: 767  DQIKGLIASSGKMMLLDQLLSKLKKDGHRVLIFSQMVKMLDILGDYLSLR-GYK-FQRLD 824

Query: 1121 GSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++ G R+ AI  FN +D   F FLLSTR+ GLGINL TADTV+I+DSD+NP AD+QAM
Sbjct: 825  GTIAAGPRRMAINHFNAEDSEDFCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAM 884

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
             RAHRIGQ + + +YRLV + +VEE +L+ A+ KL+L+ L +
Sbjct: 885  ARAHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTI 926


>gi|358377998|gb|EHK15681.1| hypothetical protein TRIVIDRAFT_56270 [Trichoderma virens Gv29-8]
          Length = 1658

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 265/642 (41%), Positives = 393/642 (61%), Gaps = 53/642 (8%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVINI-------------- 656
            +E+ +KW GKS++H++W + +S   V   RK+ENY  K+    ++I              
Sbjct: 305  FEYFIKWQGKSHLHDTWELLDSLRNVRGFRKVENYFRKFVDQELDIRFGDDIPPETKEQF 364

Query: 657  ---------CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                       E + + +RV+++R   +G  E +VKW GL Y+ECTWE   E +   +  
Sbjct: 365  FLDRDRDEEALEDYTKVERVVAVRDGDEGD-EYYVKWKGLTYEECTWEAASEIST-LFQD 422

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D ++    ++   D  E  L        +S++  L +QP+ + GG L   QL+ LN+L
Sbjct: 423  KIDQYIDRTSRSWLSDRKETSLD------TRSKMTKLEKQPDFIVGGELREFQLKGLNFL 476

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W +  NVILADEMGLGKTV   +F+S L    + + P LV+ PLS +P W   F  W
Sbjct: 477  CLNWTRGNNVILADEMGLGKTVQTVSFLSWLRNARRQEGPSLVVAPLSVIPAWCDTFNNW 536

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            +P++N V Y G   AR+IIR+ E        +N      KFNVL+T+YE IL D   L+ 
Sbjct: 537  SPDINYVVYLGPEDARSIIRENELI------INGNPKKPKFNVLVTSYEFILQDWQFLQS 590

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+VL VDE HRLKNS S+L+  L  F    ++L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 591  IKWQVLAVDEAHRLKNSESQLYQRLVGFGIPCKILITGTPIQNNLAELSALLDFLNPGKV 650

Query: 948  PSLSSFEEKFNDLTTT---QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
                + +E  + L+     +K++EL + +AP++LRR K+    ++PPKTE+++ VELS +
Sbjct: 651  ----TIDEDLDSLSAADAQEKLQELHRSIAPYILRRTKETVESDLPPKTEKIIRVELSDV 706

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFL 1062
            Q +YY+ +LT+NY  L +   G  + S+LNI+M+L+KV NHPY+ PG E    +GS    
Sbjct: 707  QLDYYKNILTRNYAALCDATNG-HKNSLLNIMMELKKVSNHPYMFPGAEERVLAGSTRRE 765

Query: 1063 HEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             +++  I +S K+ L+  +L  L K+GHRVLIFSQM ++LDIL DYL++  G K ++R+D
Sbjct: 766  DQIKGLIASSGKMMLIDQLLSKLKKDGHRVLIFSQMVRMLDILGDYLSLR-GYK-FQRLD 823

Query: 1121 GSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++ G R+ AI  FN +D   F FLLSTR+ GLGINL TADTVII+DSD+NP AD+QAM
Sbjct: 824  GTIAAGPRRMAINHFNAEDSEDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAM 883

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
             RAHRIGQ + + +YRLV + +VEE +L+ A+ KL+L+ L +
Sbjct: 884  ARAHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTI 925


>gi|46125449|ref|XP_387278.1| hypothetical protein FG07102.1 [Gibberella zeae PH-1]
          Length = 1627

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 273/643 (42%), Positives = 394/643 (61%), Gaps = 55/643 (8%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKY---------GTTVINICDER- 660
            +E+ +KW GKS++H++W     ++     RK+ENY  K+         GT +     E+ 
Sbjct: 292  FEYFIKWQGKSHLHDTWETFDDIRGYRGHRKVENYFKKFVDYELAIRFGTDIPPETKEQF 351

Query: 661  -------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                         + + +RV+++R   DGT E  VKW GL Y+ECTWE          S 
Sbjct: 352  FLDRERDEEAYEDYTKVERVVAVRDGDDGT-EYLVKWKGLTYEECTWEIA--------SD 402

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQ-QSEIVALTEQPEELKGGALFPHQLEALNW 766
            ++D F     Q L + +   +  R + + + +S +V L EQP+ +K G L   QL  LN+
Sbjct: 403  ISDAFQDQIDQYLDRASRSWQSDRKETNPETRSRMVKLEEQPDFIKNGELRNFQLRGLNF 462

Query: 767  LRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFAL 826
            L   W K  NVILADEMGLGKTV   +F+S L    + + P LV+ PLS +P W   F  
Sbjct: 463  LCLNWTKGNNVILADEMGLGKTVQTVSFLSWLRNARQQEGPSLVVAPLSVIPAWCDTFNH 522

Query: 827  WAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLR 886
            W+P+LN V Y G   AR IIR++E      D   KK    KFN+L+T+YE IL D   L+
Sbjct: 523  WSPDLNYVVYLGPEDARNIIREHELLV---DGNPKKP---KFNILVTSYEFILQDWQFLQ 576

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
             + W+ L VDE HRLKN  S+L++ L +F    +VL+TGTP+QNN+ E+  LL+FL P  
Sbjct: 577  SIKWQTLAVDEAHRLKNRESQLYNRLVNFGIPCKVLITGTPIQNNLAELSALLDFLNPGK 636

Query: 947  FPSLSSFEEKFNDLTTT---QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
                   +E  + L+     +K+++L K +AP++LRR K+    ++PPKTE+++ VELS 
Sbjct: 637  V----DIDEDLDSLSANDAQEKLQQLHKAIAPYILRRTKETVESDLPPKTEKIIRVELSD 692

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEF 1061
            +Q +YY+ +LT+NY  L +   G  + S+LNI+M+L+K+ NHPY+ PG E    +GSV  
Sbjct: 693  VQLDYYKNILTRNYSALCDATNG-HKNSLLNIMMELKKISNHPYMFPGAEEKVLAGSVRR 751

Query: 1062 LHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
              +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL DY ++  G K ++R+
Sbjct: 752  EDQIKGLIASSGKMMLLDQLLSKLNKDGHRVLIFSQMVKMLDILGDYCSLR-GYK-FQRL 809

Query: 1120 DGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DG+++ G R+ AI  FN D S  F FLLSTR+ GLGINL TADTVII+DSD+NP AD+QA
Sbjct: 810  DGTIAAGPRRMAINHFNADDSDDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQA 869

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            M RAHRIGQ + + +YRLV + +VEE +L+ A+ KL+L+ L +
Sbjct: 870  MARAHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTI 912


>gi|151944881|gb|EDN63140.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae YJM789]
          Length = 1468

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 289/686 (42%), Positives = 403/686 (58%), Gaps = 72/686 (10%)

Query: 611  SYEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY-------------GTTVINI 656
            +YEFL+KW  +S++HN+W   ES  +V   ++L+NY  ++                 I I
Sbjct: 210  NYEFLIKWTDESHLHNTWETYESIGQVRGLKRLDNYCKQFIIEDQQVRLDPYVTAEDIEI 269

Query: 657  CD----------ERWKQPQRVI-SLRSS-KDGTRE--AFVKWTGLPYDECTWEKLDEPAL 702
             D          E +  P+R+I S R+S +DGT +    VKW  L YDE TWE       
Sbjct: 270  MDMERERRLDEFEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWE------- 322

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDE---LPRGKGD--CQQSEIVALTEQPEELKGGALF 757
                + TD+ V+   + +K   + +    LP+   +   Q+     L+ QP  +KGG L 
Sbjct: 323  ----NATDI-VKLAPEQVKHFQNRENSKILPQYSSNYTSQRPRFEKLSVQPPFIKGGELR 377

Query: 758  PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTM 817
              QL  +NW+   W K  N ILADEMGLGKTV   AFIS L    +   P +++VPLSTM
Sbjct: 378  DFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTM 437

Query: 818  PNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEM 877
            P WL  F  WAP+LN + Y G  K+R  IR+YE++ ++P    KKT   KFNVLLTTYE 
Sbjct: 438  PAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFY-TNPRAKGKKT--MKFNVLLTTYEY 494

Query: 878  ILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYN 937
            IL D + L  + W+ + VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  
Sbjct: 495  ILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAA 554

Query: 938  LLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            L+NFL P  F      + +  D    + + +L + + P +LRRLKKD  +++P KTER++
Sbjct: 555  LVNFLMPGRFTIDQEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERIL 614

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP--- 1054
             VELS +Q EYY+ +LTKNY  L    KG    S+LNI+ +L+K  NHPYL    E    
Sbjct: 615  RVELSDVQTEYYKNILTKNYSALTAGAKG-GHFSLLNIMNELKKASNHPYLFDNAEERVL 673

Query: 1055 ---DSGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
                 G +   + +R  I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I
Sbjct: 674  QKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSI 733

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDS 1168
            +     ++R+DG+V    R+ +I  FN  D + FVFLLSTR+ GLGINL TADTV+I+DS
Sbjct: 734  K--GINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDS 791

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------- 1221
            D+NP AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   +       
Sbjct: 792  DWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDG 851

Query: 1222 NKSGSQK-----EVEDILRWGTEELF 1242
            NK   +      E+  IL++G   +F
Sbjct: 852  NKYTKKNEPNAGELSAILKFGAGNMF 877


>gi|256271313|gb|EEU06383.1| Chd1p [Saccharomyces cerevisiae JAY291]
          Length = 1468

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 289/686 (42%), Positives = 403/686 (58%), Gaps = 72/686 (10%)

Query: 611  SYEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY-------------GTTVINI 656
            +YEFL+KW  +S++HN+W   ES  +V   ++L+NY  ++                 I I
Sbjct: 210  NYEFLIKWADESHLHNTWETYESIGQVRGLKRLDNYCKQFIIEDQQVRLDPYVTAEDIEI 269

Query: 657  CD----------ERWKQPQRVI-SLRSS-KDGTRE--AFVKWTGLPYDECTWEKLDEPAL 702
             D          E +  P+R+I S R+S +DGT +    VKW  L YDE TWE       
Sbjct: 270  MDMERERRLDEFEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWE------- 322

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDE---LPRGKGD--CQQSEIVALTEQPEELKGGALF 757
                + TD+ V+   + +K   + +    LP+   +   Q+     L+ QP  +KGG L 
Sbjct: 323  ----NATDI-VKLAPEQVKHFQNRENSKILPQYSSNYTSQRPRFEKLSVQPPFIKGGELR 377

Query: 758  PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTM 817
              QL  +NW+   W K  N ILADEMGLGKTV   AFIS L    +   P +++VPLSTM
Sbjct: 378  DFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTM 437

Query: 818  PNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEM 877
            P WL  F  WAP+LN + Y G  K+R  IR+YE++ ++P    KKT   KFNVLLTTYE 
Sbjct: 438  PAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFY-TNPRAKGKKT--MKFNVLLTTYEY 494

Query: 878  ILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYN 937
            IL D + L  + W+ + VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  
Sbjct: 495  ILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAA 554

Query: 938  LLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            L+NFL P  F      + +  D    + + +L + + P +LRRLKKD  +++P KTER++
Sbjct: 555  LVNFLMPGRFTIDQEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERIL 614

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP--- 1054
             VELS +Q EYY+ +LTKNY  L    KG    S+LNI+ +L+K  NHPYL    E    
Sbjct: 615  RVELSDVQTEYYKNILTKNYSALTAGAKG-GHFSLLNIMNELKKASNHPYLFDNAEERVL 673

Query: 1055 ---DSGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
                 G +   + +R  I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I
Sbjct: 674  QKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSI 733

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDS 1168
            +     ++R+DG+V    R+ +I  FN  D + FVFLLSTR+ GLGINL TADTV+I+DS
Sbjct: 734  K--GINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDS 791

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------- 1221
            D+NP AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   +       
Sbjct: 792  DWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDG 851

Query: 1222 NKSGSQK-----EVEDILRWGTEELF 1242
            NK   +      E+  IL++G   +F
Sbjct: 852  NKYTKKNEPNAGELSAILKFGAGNMF 877


>gi|6321012|ref|NP_011091.1| Chd1p [Saccharomyces cerevisiae S288c]
 gi|418395|sp|P32657.1|CHD1_YEAST RecName: Full=Chromo domain-containing protein 1; AltName:
            Full=ATP-dependent helicase CHD1
 gi|603404|gb|AAB64691.1| Chd1p: transcriptional regulator [Saccharomyces cerevisiae]
 gi|285811798|tpg|DAA07826.1| TPA: Chd1p [Saccharomyces cerevisiae S288c]
 gi|392299868|gb|EIW10960.1| Chd1p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 1468

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 289/686 (42%), Positives = 403/686 (58%), Gaps = 72/686 (10%)

Query: 611  SYEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY-------------GTTVINI 656
            +YEFL+KW  +S++HN+W   ES  +V   ++L+NY  ++                 I I
Sbjct: 210  NYEFLIKWTDESHLHNTWETYESIGQVRGLKRLDNYCKQFIIEDQQVRLDPYVTAEDIEI 269

Query: 657  CD----------ERWKQPQRVI-SLRSS-KDGTRE--AFVKWTGLPYDECTWEKLDEPAL 702
             D          E +  P+R+I S R+S +DGT +    VKW  L YDE TWE       
Sbjct: 270  MDMERERRLDEFEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWE------- 322

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDE---LPRGKGD--CQQSEIVALTEQPEELKGGALF 757
                + TD+ V+   + +K   + +    LP+   +   Q+     L+ QP  +KGG L 
Sbjct: 323  ----NATDI-VKLAPEQVKHFQNRENSKILPQYSSNYTSQRPRFEKLSVQPPFIKGGELR 377

Query: 758  PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTM 817
              QL  +NW+   W K  N ILADEMGLGKTV   AFIS L    +   P +++VPLSTM
Sbjct: 378  DFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTM 437

Query: 818  PNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEM 877
            P WL  F  WAP+LN + Y G  K+R  IR+YE++ ++P    KKT   KFNVLLTTYE 
Sbjct: 438  PAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFY-TNPRAKGKKT--MKFNVLLTTYEY 494

Query: 878  ILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYN 937
            IL D + L  + W+ + VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  
Sbjct: 495  ILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAA 554

Query: 938  LLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            L+NFL P  F      + +  D    + + +L + + P +LRRLKKD  +++P KTER++
Sbjct: 555  LVNFLMPGRFTIDQEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERIL 614

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP--- 1054
             VELS +Q EYY+ +LTKNY  L    KG    S+LNI+ +L+K  NHPYL    E    
Sbjct: 615  RVELSDVQTEYYKNILTKNYSALTAGAKG-GHFSLLNIMNELKKASNHPYLFDNAEERVL 673

Query: 1055 ---DSGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
                 G +   + +R  I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I
Sbjct: 674  QKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSI 733

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDS 1168
            +     ++R+DG+V    R+ +I  FN  D + FVFLLSTR+ GLGINL TADTV+I+DS
Sbjct: 734  K--GINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDS 791

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------- 1221
            D+NP AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   +       
Sbjct: 792  DWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDG 851

Query: 1222 NKSGSQK-----EVEDILRWGTEELF 1242
            NK   +      E+  IL++G   +F
Sbjct: 852  NKYTKKNEPNAGELSAILKFGAGNMF 877


>gi|259146092|emb|CAY79352.1| Chd1p [Saccharomyces cerevisiae EC1118]
 gi|323348857|gb|EGA83095.1| Chd1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|349577825|dbj|GAA22993.1| K7_Chd1p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 1468

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 289/686 (42%), Positives = 403/686 (58%), Gaps = 72/686 (10%)

Query: 611  SYEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY-------------GTTVINI 656
            +YEFL+KW  +S++HN+W   ES  +V   ++L+NY  ++                 I I
Sbjct: 210  NYEFLIKWTDESHLHNTWETYESIGQVRGLKRLDNYCKQFIIEDQQVRLDPYVTAEDIEI 269

Query: 657  CD----------ERWKQPQRVI-SLRSS-KDGTRE--AFVKWTGLPYDECTWEKLDEPAL 702
             D          E +  P+R+I S R+S +DGT +    VKW  L YDE TWE       
Sbjct: 270  MDMERERRLDEFEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWE------- 322

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDE---LPRGKGD--CQQSEIVALTEQPEELKGGALF 757
                + TD+ V+   + +K   + +    LP+   +   Q+     L+ QP  +KGG L 
Sbjct: 323  ----NATDI-VKLAPEQVKHFQNRENSKILPQYSSNYTSQRPRFEKLSVQPPFIKGGELR 377

Query: 758  PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTM 817
              QL  +NW+   W K  N ILADEMGLGKTV   AFIS L    +   P +++VPLSTM
Sbjct: 378  DFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTM 437

Query: 818  PNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEM 877
            P WL  F  WAP+LN + Y G  K+R  IR+YE++ ++P    KKT   KFNVLLTTYE 
Sbjct: 438  PAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFY-TNPRAKGKKT--MKFNVLLTTYEY 494

Query: 878  ILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYN 937
            IL D + L  + W+ + VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  
Sbjct: 495  ILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAA 554

Query: 938  LLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            L+NFL P  F      + +  D    + + +L + + P +LRRLKKD  +++P KTER++
Sbjct: 555  LVNFLMPGRFTIDQEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERIL 614

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP--- 1054
             VELS +Q EYY+ +LTKNY  L    KG    S+LNI+ +L+K  NHPYL    E    
Sbjct: 615  RVELSDVQTEYYKNILTKNYSALTAGAKG-GHFSLLNIMNELKKASNHPYLFDNAEERVL 673

Query: 1055 ---DSGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
                 G +   + +R  I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I
Sbjct: 674  QKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSI 733

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDS 1168
            +     ++R+DG+V    R+ +I  FN  D + FVFLLSTR+ GLGINL TADTV+I+DS
Sbjct: 734  K--GINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDS 791

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------- 1221
            D+NP AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   +       
Sbjct: 792  DWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDG 851

Query: 1222 NKSGSQK-----EVEDILRWGTEELF 1242
            NK   +      E+  IL++G   +F
Sbjct: 852  NKYTKKNEPNAGELSAILKFGAGNMF 877


>gi|398410912|ref|XP_003856803.1| SNF2 family DNA-dependent chromodomain-containing ATPase
            [Zymoseptoria tritici IPO323]
 gi|339476688|gb|EGP91779.1| SNF2 family DNA-dependent chromodomain-containing ATPase
            [Zymoseptoria tritici IPO323]
          Length = 1578

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 271/659 (41%), Positives = 384/659 (58%), Gaps = 54/659 (8%)

Query: 607  GKAVSYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKYGTTVINICD------- 658
            G    YEF +KW G+++ H +W P ++L      R+LENY  K     I +         
Sbjct: 232  GDKHDYEFYIKWQGQAHYHATWHPWAELSSYKGFRRLENYFRKIVKIEIQLATDPDIAAE 291

Query: 659  --ERW--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPAL 702
              E+W              K+ +RVI  R   +  +E +VKW GL YD CTWE     A 
Sbjct: 292  DREKWNLDREAYLDSLVDYKKVERVIGARDG-ETEKEYYVKWKGLYYDSCTWETATLVAQ 350

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLE 762
            E   H  D ++    +    D +E  +        +S       QP  +KGG L   Q+ 
Sbjct: 351  EA-QHQIDRYLDRSAKLPVSDKNEQNV------NTRSSYKPFRTQPAYIKGGDLREFQIH 403

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             +N+L   W K  NVILADEMGLGKTV   +F++ L  + +   P +V+VPLSTMP W  
Sbjct: 404  GVNFLAHHWCKGNNVILADEMGLGKTVQTVSFMNWLRNDRRQNGPFIVVVPLSTMPAWAD 463

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
             F LW P++N V Y+G   AR IIR +E      D   KK    KFNVLLTTYE IL DS
Sbjct: 464  TFDLWTPDINYVVYNGNEAARKIIRDHELLV---DGNPKKV---KFNVLLTTYEYILVDS 517

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
              L  + W+ + VDE HRLKN  S+L++ L  F    R+L+TGTP+QN + E+  L++FL
Sbjct: 518  GFLSQLKWQFMAVDEAHRLKNRESQLYAKLMDFGAPSRLLITGTPMQNTLSELSALMDFL 577

Query: 943  QPASFPSLSSFEEKFNDLTT---TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPV 999
             P        F +   DLT+   + K+ EL   ++P+M+RR K+    ++PPKTE+++ V
Sbjct: 578  MPGKI-----FVDDQLDLTSEHASTKLAELTDAISPYMIRRTKQKVENDLPPKTEKIIRV 632

Query: 1000 ELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SG 1057
            ELS +Q EYY+ +LT+NY  L N G    + S+LNI+M+L+K  NHP++ P  E    +G
Sbjct: 633  ELSDVQLEYYKNILTRNYAAL-NAGNKAGKTSLLNIMMELKKASNHPFMFPNAEDRILAG 691

Query: 1058 SVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKT 1115
            S     +++  I +S K+ LL  +L  + ++GHRVLIFSQM K+LDIL DYL +      
Sbjct: 692  SDARDDQLKALITSSGKMMLLDQLLTKMKRDGHRVLIFSQMVKMLDILGDYLQLR--GHQ 749

Query: 1116 YERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHA 1174
            ++R+DG+++ G R+ AI  FN +D   F FLLSTR+ GLGINL TADTVII+DSD+NP A
Sbjct: 750  FQRLDGTIAAGPRRMAIDHFNAKDSQDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQA 809

Query: 1175 DIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            D+QAM RAHRIGQ K + +YRLV + +VEE +L+ A+ KLML+ + + +  + K+  ++
Sbjct: 810  DLQAMARAHRIGQKKPVTIYRLVSKDTVEEEVLERARNKLMLEFITIQRGVTDKDAREL 868


>gi|408397898|gb|EKJ77035.1| hypothetical protein FPSE_02679 [Fusarium pseudograminearum CS3096]
          Length = 1671

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 273/643 (42%), Positives = 393/643 (61%), Gaps = 55/643 (8%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKY---------GTTVINICDER- 660
            +E+ +KW GKS++H++W     ++     RK+ENY  K+         GT +     E+ 
Sbjct: 292  FEYFIKWQGKSHLHDTWETFDDIRGYRGHRKVENYFKKFVDYELAIRFGTDIPPETKEQF 351

Query: 661  -------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                         + + +RV+++R   DGT E  VKW GL Y+ECTWE          S 
Sbjct: 352  FLDRERDEEAYEDYTKVERVVAVRDGDDGT-EYLVKWKGLTYEECTWEIT--------SD 402

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQ-QSEIVALTEQPEELKGGALFPHQLEALNW 766
            ++D F     Q L + +   +  R + + + +S +V L EQP+ +K G L   QL  LN+
Sbjct: 403  ISDAFQDQIDQYLDRASRSWQSDRKETNPETRSRMVKLEEQPDFIKNGELRNFQLRGLNF 462

Query: 767  LRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFAL 826
            L   W K  NVILADEMGLGKTV   +F+S L      + P LV+ PLS +P W   F  
Sbjct: 463  LCLNWTKGNNVILADEMGLGKTVQTVSFLSWLRNARHQEGPSLVVAPLSVIPAWCDTFNH 522

Query: 827  WAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLR 886
            W+P+LN V Y G   AR IIR++E      D   KK    KFN+L+T+YE IL D   L+
Sbjct: 523  WSPDLNYVVYLGPEDARNIIREHELLV---DGNPKKP---KFNILVTSYEFILQDWQFLQ 576

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
             + W+ L VDE HRLKN  S+L++ L +F    +VL+TGTP+QNN+ E+  LL+FL P  
Sbjct: 577  SIKWQTLAVDEAHRLKNRESQLYNRLVNFGIPCKVLITGTPIQNNLAELSALLDFLNPGK 636

Query: 947  FPSLSSFEEKFNDLTTT---QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
                   +E  + L+     +K+++L K +AP++LRR K+    ++PPKTE+++ VELS 
Sbjct: 637  V----DIDEDLDSLSANDAQEKLQQLHKAIAPYILRRTKETVESDLPPKTEKIIRVELSD 692

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEF 1061
            +Q +YY+ +LT+NY  L +   G  + S+LNI+M+L+K+ NHPY+ PG E    +GSV  
Sbjct: 693  VQLDYYKNILTRNYSALCDATNG-HKNSLLNIMMELKKISNHPYMFPGAEEKVLAGSVRR 751

Query: 1062 LHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
              +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL DY ++  G K ++R+
Sbjct: 752  EDQIKGLIASSGKMMLLDQLLSKLNKDGHRVLIFSQMVKMLDILGDYCSLR-GYK-FQRL 809

Query: 1120 DGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DG+++ G R+ AI  FN D S  F FLLSTR+ GLGINL TADTVII+DSD+NP AD+QA
Sbjct: 810  DGTIAAGPRRMAINHFNADDSDDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQA 869

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            M RAHRIGQ + + +YRLV + +VEE +L+ A+ KL+L+ L +
Sbjct: 870  MARAHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTI 912


>gi|50293735|ref|XP_449279.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528592|emb|CAG62253.1| unnamed protein product [Candida glabrata]
          Length = 1476

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 292/686 (42%), Positives = 398/686 (58%), Gaps = 72/686 (10%)

Query: 611  SYEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY----------------GTTV 653
            +YEF +KW  +S++HN+W   ES   V   ++L+NY  +Y                   +
Sbjct: 225  NYEFQIKWTDQSHLHNTWETYESLAGVKGIKRLDNYCKQYIIQEQQVRLDPYITPEDIEI 284

Query: 654  INICDER-------WKQPQRVISLRSSK--DGTRE--AFVKWTGLPYDECTWEKLDEP-- 700
            +++  ER       +  P+R+I  +  +  DGT +    VKW  L YDE TWE   E   
Sbjct: 285  MDMEHERRLDELQEFTNPERIIDSQRVELEDGTSQLQYLVKWRHLNYDEATWEDAAEIVK 344

Query: 701  -ALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGD--CQQSEIVALTEQPEELKGGALF 757
             A E   H         RQ  K       LP+   +   ++     L+ QP  +KGG L 
Sbjct: 345  IAPEPVKHFQS------RQNSKI------LPQYSSNYTSERPRFEKLSVQPPFIKGGELR 392

Query: 758  PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTM 817
              QL  +NW+   W K+ N ILADEMGLGKTV   AFIS L    +   P LV+VPLSTM
Sbjct: 393  DFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHLVVVPLSTM 452

Query: 818  PNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEM 877
            P W+  F  WAP+++V+ Y G  K+R I R+YE++ S+P    KK    KFNVL+TTYE 
Sbjct: 453  PAWIETFEKWAPDIDVICYMGNQKSRDIEREYEFY-SNPKGKGKK--QIKFNVLMTTYEY 509

Query: 878  ILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYN 937
            IL D + L  + W+ L VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  
Sbjct: 510  ILKDRAELGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAA 569

Query: 938  LLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            L+NFL P  F      + +  D    Q + +L K + P +LRRLKKD  +++P KTER++
Sbjct: 570  LVNFLMPGRFTIDQEIDFENQDEEQEQYIRDLHKRLQPFILRRLKKDVEKSLPSKTERIL 629

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD-- 1055
             VELS +Q EYY+ +LTKNY  L    KG  + SMLNI+  L K  NHPYL    E    
Sbjct: 630  RVELSDVQTEYYKNILTKNYSALTAGAKG-GRFSMLNIMNTLMKASNHPYLFDSAEEKVL 688

Query: 1056 ----SGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
                +G++   + +R  I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I
Sbjct: 689  EKFGAGNMSRENILRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRILDILGDYLSI 748

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDS 1168
            +     ++R+DG+V    R+ AI  FN   S  FVFLLSTR+ GLGINL TADTVII+DS
Sbjct: 749  K--GINFQRLDGTVPSNQRRIAIDHFNAPGSDDFVFLLSTRAGGLGINLMTADTVIIFDS 806

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------- 1221
            D+NP AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   +       
Sbjct: 807  DWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDG 866

Query: 1222 NK-----SGSQKEVEDILRWGTEELF 1242
            NK       S  E+ +IL++G   +F
Sbjct: 867  NKYTKKTEPSAGELSEILKFGAGNMF 892


>gi|148675185|gb|EDL07132.1| mCG19747 [Mus musculus]
          Length = 1723

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 292/719 (40%), Positives = 418/719 (58%), Gaps = 90/719 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPE---SQLKVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E    Q KV   +KLEN+K K                 Y + 
Sbjct: 313  QYLIKWKGWSYIHSTWESEDSLQQQKVKGLKKLENFKKKEDEVKQWLGKVSPEDVEYFSC 372

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 373  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 432

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+ +  D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 433  SWE--DEALIGKKFQNCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 484

Query: 752  KGGAL--FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G +L    +QLE LNWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 485  GGESLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 544

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 545  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 597

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 598  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 657

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 658  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 716

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 717  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 775

Query: 1050 PG---TEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDY 1106
                 +E +SG  E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +Y
Sbjct: 776  KAPEDSERESGQ-EVLQSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEY 833

Query: 1107 LNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVII 1165
            L I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I
Sbjct: 834  LTIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVI 891

Query: 1166 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---- 1221
            +DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +    
Sbjct: 892  FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMD 951

Query: 1222 --------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                    N SG       +++E+  IL++G E+LF +   I G++       I+E +R
Sbjct: 952  TTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKE---IEGEESEPQEMDIDEILR 1007


>gi|390602569|gb|EIN11962.1| hypothetical protein PUNSTDRAFT_99321 [Punctularia strigosozonata
            HHB-11173 SS5]
          Length = 1434

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 273/672 (40%), Positives = 393/672 (58%), Gaps = 70/672 (10%)

Query: 611  SYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDER-------WKQ 663
            +YEFL ++ G   + N +I     K+   R  +    +  T  I I  ER       +K 
Sbjct: 242  TYEFLKRFKGLKRVDN-YI--KNYKLYQARLAQPGLTREDTEAITIDREREKEELETYKT 298

Query: 664  PQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE------PALEKYSHLTDLFVQFER 717
             +R+++ R S  GT E F KW GL Y+ CTWE  DE      P +E Y            
Sbjct: 299  VERIVAQRESVQGTVEYFCKWCGLNYEHCTWEDADEIRRLARPQIEAY------------ 346

Query: 718  QTLKKDASEDELPRGK---GDCQQSEIVALTEQPEELK--GGALFPHQLEALNWLRKCWH 772
               ++  +E + P          +     +TE PE L   GG L   QL  LNWL   W 
Sbjct: 347  ---RRREAEGKFPYKSVIYPKNGRPSFTKITEDPEYLSATGGKLKDFQLTGLNWLAYLWS 403

Query: 773  KSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLN 832
            K +N ILADEMGLGKTV   +FIS L+ E +   P LV+VPLST+  W ++FA WAP++N
Sbjct: 404  KGENGILADEMGLGKTVQTVSFISYLFHEMQQYGPFLVIVPLSTITAWQSQFATWAPDIN 463

Query: 833  VVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEV 892
            V+ Y G A AR +IR YE+  S     NKK    K NVLLTTYE+ L DS  L  + W++
Sbjct: 464  VITYIGTAAARDVIRTYEFGPS-----NKKL---KMNVLLTTYELTLRDSKELGEIKWQM 515

Query: 893  LVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSS 952
            L VDE HRLKNS S+L+  L SFS   ++L+TGTPLQNN+ E+ +L++FL P  F   + 
Sbjct: 516  LAVDEAHRLKNSESQLYEALRSFSAASKLLITGTPLQNNVKELLSLMHFLMPEKFALTNE 575

Query: 953  FEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAM 1012
            F+    D+   +K+++L K +   MLRRLK+D + ++P K+ER++ VE+S++Q ++Y+ +
Sbjct: 576  FD--LTDVDHEEKIKDLHKQLESLMLRRLKRDVLTSLPTKSERILRVEMSALQTQFYKNI 633

Query: 1013 LTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAK 1072
            LTKN+Q L     G +Q S+LNI ++L+K  NHP+L  G E  + + E   +  + +S K
Sbjct: 634  LTKNFQGLMKSAHGNSQISLLNIAVELKKAANHPFLFDGVEGKTENAEETLKGLVMSSGK 693

Query: 1073 LTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAI 1132
            + LL  +L  L ++GHRVLIFSQM ++LDIL DY+++      ++R+DG V+   R+ +I
Sbjct: 694  MVLLDKLLARLRQDGHRVLIFSQMVRMLDILSDYMSLR--GYLHQRLDGMVASEARKKSI 751

Query: 1133 TRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRL 1191
              FN   S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM RAHRIGQ   +
Sbjct: 752  AHFNAPNSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHV 811

Query: 1192 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG---------------------SQKEV 1230
             VYR V + ++EE +L+ AKKK++L+   +N+                       S+ E+
Sbjct: 812  SVYRFVSKDTMEEDVLERAKKKMVLEYAIINQMDTTQAHLSSKANAKDMSSKDNLSKDEL 871

Query: 1231 EDILRWGTEELF 1242
              +L++G +++F
Sbjct: 872  TAVLKYGAQKMF 883


>gi|344304707|gb|EGW34939.1| transcriptional regulator [Spathaspora passalidarum NRRL Y-27907]
          Length = 1410

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 293/728 (40%), Positives = 404/728 (55%), Gaps = 89/728 (12%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKY----------------GTT 652
            + Y F +KW   S++HN+W     LK     RK+ENY  ++                   
Sbjct: 189  LDYLFKIKWTDASHLHNTWEKYQDLKDFKGFRKVENYIKQFIIYDQEIRNDPLTTKEDLE 248

Query: 653  VINICDER-------WKQPQRVI-SLRSSKD---GTREAFVKWTGLPYDECTWEKLDEPA 701
            V++I  ER       + Q +R++ S R   D      + FVKW  L YDEC+WE  +E A
Sbjct: 249  VMDIERERRRDEQDEYTQVERIVDSQRIENDLGENKLQYFVKWKRLYYDECSWEDGEEIA 308

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGD---CQQSEIVALTEQPEELKGGALFP 758
                  +    V   +Q LK       LP    +    Q+     L +QP  +K G L  
Sbjct: 309  -----KIAPEQVSKYQQRLKSKI----LPNLSANYPISQRPRFEKLVKQPVFIKNGELRD 359

Query: 759  HQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
             QL  LNW+   W +++N ILADEMGLGKT+   +F+S L    +   P LV+VPLSTMP
Sbjct: 360  FQLTGLNWMAFLWSRNENGILADEMGLGKTIQTISFLSWLIYARRQNGPHLVVVPLSTMP 419

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
             W   F LWAP +N V Y G  +AR  IR+YEW+  +           KFNVLLTTYE I
Sbjct: 420  AWQETFELWAPEVNCVYYLGNGEARKTIREYEWYTPN--------GKPKFNVLLTTYEYI 471

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            L D + L  + W+ L VDE HRLKNS S L+  L  F   +R+L+TGTPLQNN+ E+ +L
Sbjct: 472  LKDRNELGSIKWQFLAVDEAHRLKNSESSLYESLKGFKVANRLLITGTPLQNNLKELASL 531

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
             NFL P  F      + +  D    + +++L+K + P +LRRLKKD  +++P KTER++ 
Sbjct: 532  CNFLMPGKFNIEQEIDFESPDAEQERYIKDLQKKIQPFILRRLKKDVEKSLPSKTERILR 591

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE----- 1053
            VELS IQ +YY+ ++TKNY  L N G   +Q S+LNI+ +L+K  NHPYL  G E     
Sbjct: 592  VELSDIQTDYYKNIITKNYAAL-NAGNKGSQISLLNIMSELKKASNHPYLFDGAEERVLA 650

Query: 1054 -PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFG 1112
               S S E +    I +S K+ LL  +L  L KEGHRVLIFSQM ++LDIL DYL+I+  
Sbjct: 651  KAGSASRENILRGMIMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRMLDILGDYLSIK-- 708

Query: 1113 PKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFN 1171
               ++R+DG +    R+ +I  FN   S+ F+FLLSTR+ GLGINL TADTVII+DSD+N
Sbjct: 709  GYQFQRLDGGIPSAQRRISIDHFNAPDSKDFIFLLSTRAGGLGINLMTADTVIIFDSDWN 768

Query: 1172 PHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD----QLFVNKSGSQ 1227
            P AD+QAM RAHRIGQ   + VYR V + +VEE IL+ A+KK++L+     L +  + S+
Sbjct: 769  PQADLQAMARAHRIGQKNHVSVYRFVSKDTVEEEILERARKKMILEYAIISLGITDANSK 828

Query: 1228 K--------EVEDILRWGTEELFNDSPG-------------------INGKDMGENNTSI 1260
            K        E+  IL++G   +F ++                     I   D+GE+N   
Sbjct: 829  KTKNEPSSSELSQILKFGAGTMFKENDNQKKLEDLNLDDVLSHAEDHITTPDLGESNLGS 888

Query: 1261 EEAVRDLE 1268
            EE ++  E
Sbjct: 889  EEFLKQFE 896


>gi|345306816|ref|XP_003428508.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 7-like [Ornithorhynchus anatinus]
          Length = 2902

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 295/748 (39%), Positives = 414/748 (55%), Gaps = 84/748 (11%)

Query: 530  KVQDESAVSTEDLGERNDKMVVEDADVSLRDNEGLTVSEIHITCESTDKDVDVGKKTSGS 589
            K+ DE A   E +G  +    ++       D EG  V +I ++C S  K  D G      
Sbjct: 759  KISDEEADDVEAVGRDSPSNTLQSEQQESVDAEGPVVEKI-MSCRSVKKQKDSG------ 811

Query: 590  VAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKA 647
                       E  +++      EF VK+   S +H  W     L      ++K++ +KA
Sbjct: 812  -----------EEVEIE------EFYVKYKNFSYLHCQWASVEDLDKDKRIQQKIKRFKA 854

Query: 648  KYGTT--VINICDERWK----QPQRVISLRSSKDGTREA----FVKWTGLPYDECTWE-- 695
            K G    +  I DE +     +  R++    S D   E      VKW  LPY++ TWE  
Sbjct: 855  KQGQNKFLSEIEDELFNPDYVEVDRIMDFARSTDDNGEPVTHYLVKWCSLPYEDSTWELK 914

Query: 696  -KLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG 754
              +D+  +E++  L           + ++   + + R   D  +      +E   E K  
Sbjct: 915  QDIDQAKIEEFEKL-----------MSREPETERVERPPADDWKK-----SESSREYKNN 958

Query: 755  -ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVP 813
              L  +QLE +NWL   W+ ++N ILADEMGLGKT+ +  F+  +Y +     P LV+ P
Sbjct: 959  NKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAP 1017

Query: 814  LSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLT 873
            LST+PNW  EF  W   LNVV YHG   +R  I+ YE +  DP     K  SYKF+ ++T
Sbjct: 1018 LSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIIT 1075

Query: 874  TYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIG 933
            T+EMIL D   LR +PW  +V+DE HRLKN   KL   L     +H+VLLTGTPLQN + 
Sbjct: 1076 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVE 1135

Query: 934  EMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKT 993
            E+++LL+FL+P+ FPS ++F ++F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK 
Sbjct: 1136 ELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKE 1195

Query: 994  ERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE 1053
            E ++ VEL++IQ +YYRA+L KN+  L   G      ++LN +M+LRK CNHPYLI G E
Sbjct: 1196 ETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAE 1255

Query: 1054 P----------DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDIL 1103
                       ++ S +F  +  I+A+ KL L+  +L  L   GHRVLIFSQM + LDIL
Sbjct: 1256 EKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDIL 1315

Query: 1104 EDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADT 1162
            EDYL     P  YER+DG V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT
Sbjct: 1316 EDYLIQRRYP--YERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADT 1373

Query: 1163 VIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFV 1221
             II+DSD+NP  D+QA  R HRIGQSK + +YRL+ R S E  +   A  KL LD+ +  
Sbjct: 1374 CIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQ 1433

Query: 1222 NKSG-----------SQKEVEDILRWGT 1238
            + SG           S+KE+ED+LR G 
Sbjct: 1434 SMSGRENATNGVQQLSKKEIEDLLRKGA 1461


>gi|400602704|gb|EJP70306.1| SNF2 family chromodomain-helicase DNA-binding protein [Beauveria
            bassiana ARSEF 2860]
          Length = 1674

 Score =  481 bits (1238), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 271/639 (42%), Positives = 388/639 (60%), Gaps = 47/639 (7%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKYGTTVINI-------------- 656
            +E+ +KW GKSN+H++W     L+ V   RK+ENY  K     ++I              
Sbjct: 312  FEYFIKWQGKSNLHDTWETIDSLRNVRGFRKVENYFRKLVEYELDIRFGDEMAPETKEQY 371

Query: 657  ---------CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                       E + + +RV+++R  +DGT E FVKW GL Y+ECTWE+    + + +  
Sbjct: 372  FLDRERDEEAFEDFTKVERVVNVREGEDGT-EYFVKWKGLTYEECTWEQASAISAQ-FQD 429

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D ++    +    D  E  L        +S +  L  QP+ ++ G L P QL  LN+L
Sbjct: 430  KIDQYLDRASRPWHSDRKETNLD------TRSRMTKLDAQPKYIQNGELRPFQLRGLNFL 483

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W +  NVILADEMGLGKTV   +F+S L    K + P LV+ PLS +P W   F  W
Sbjct: 484  CLNWCRGNNVILADEMGLGKTVQTVSFLSWLRNCRKQEGPSLVVAPLSVIPAWCDTFNNW 543

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            +P+LN V Y G   AR IIR+ E      D   KK    KFNVL+T+YE IL D   L+ 
Sbjct: 544  SPDLNYVVYLGPEDARNIIRENELLV---DGNPKKP---KFNVLVTSYEFILQDWQFLQS 597

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + ++VL VDE HRLKNS S+L+  L  F    +VL+TGTP+QNN+ E+  LL+FL P   
Sbjct: 598  IKFQVLAVDEAHRLKNSESQLYMRLVGFGIPCKVLITGTPIQNNLSELAALLDFLNPGKV 657

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
              +    +    +   +K++EL   +AP++LRR K+    ++PPKTE+++ VELS +Q +
Sbjct: 658  -KIDQDLDTLAAVDAQEKLQELHSAIAPYILRRTKETVESDLPPKTEKIIRVELSDVQLD 716

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFLHEM 1065
            YY+ +LT+NY  L +   G  + S+LNI+M+L+K+ NHPY+ PG E    +GS+    ++
Sbjct: 717  YYKNILTRNYAALSDASSG-HKNSLLNIMMELKKISNHPYMFPGAEERVLAGSIRREDQI 775

Query: 1066 R--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
            +  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL DY+++  G K ++R+DG++
Sbjct: 776  KGLITSSGKMMLLDQLLSKLKKDGHRVLIFSQMVKMLDILGDYMSLR-GYK-FQRLDGTI 833

Query: 1124 SVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
            + G R+ AI  FN D S  F FLLSTR+ GLGINL TADTVII+DSD+NP AD+QAM RA
Sbjct: 834  AAGPRRMAINHFNADDSEDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARA 893

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            HRIGQ + + +YRLV + +VEE +L+ A+ KL+L+ L +
Sbjct: 894  HRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTI 932


>gi|189458810|ref|NP_001074814.2| chromodomain helicase DNA binding protein 2 [Mus musculus]
          Length = 1827

 Score =  481 bits (1238), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 292/719 (40%), Positives = 418/719 (58%), Gaps = 90/719 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPE---SQLKVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E    Q KV   +KLEN+K K                 Y + 
Sbjct: 306  QYLIKWKGWSYIHSTWESEDSLQQQKVKGLKKLENFKKKEDEVKQWLGKVSPEDVEYFSC 365

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 366  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 425

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+ +  D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 426  SWE--DEALIGKKFQNCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 477

Query: 752  KGGAL--FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G +L    +QLE LNWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 478  GGESLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 537

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 538  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 590

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 591  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 650

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 651  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 709

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 710  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 768

Query: 1050 PG---TEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDY 1106
                 +E +SG  E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +Y
Sbjct: 769  KAPEDSERESGQ-EVLQSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEY 826

Query: 1107 LNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVII 1165
            L I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I
Sbjct: 827  LTIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVI 884

Query: 1166 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---- 1221
            +DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +    
Sbjct: 885  FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMD 944

Query: 1222 --------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                    N SG       +++E+  IL++G E+LF +   I G++       I+E +R
Sbjct: 945  TTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKE---IEGEESEPQEMDIDEILR 1000


>gi|167535609|ref|XP_001749478.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772106|gb|EDQ85763.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1903

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 295/790 (37%), Positives = 448/790 (56%), Gaps = 96/790 (12%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDERWKQ--PQ------ 665
            +L+KW   + IH +W PE+ ++   KR+L+N+KA++    ++  ++ W+   P+      
Sbjct: 496  YLLKWRDVAYIHATWAPEAWVERTLKRRLKNFKARHDEGELDQAED-WESVVPRTYCIVG 554

Query: 666  RVISLRSSKDGTR-EAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA 724
            RV++    +   R    VKW GL + E TWE  D+  ++  +   +   QFE++  +K  
Sbjct: 555  RVLAESQDESNDRIVVLVKWLGLEHSEATWEYKDD--IQDVTGFKEAMAQFEKR--RKGI 610

Query: 725  SEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
            +E + P  +    Q    +L +QP  +K G L  +QLE LN+L   W +++NVILADEMG
Sbjct: 611  AEVKPPPRR----QFRFKSLKKQPSNIKHGELHDYQLEGLNFLIFSWMRNRNVILADEMG 666

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKT+   AF+S L      + P L++ PLST PNW  EFA WAP+L+VV + G A +R 
Sbjct: 667  LGKTLQTIAFVSWLK-HTAQRGPFLIVAPLSTCPNWEREFAQWAPDLHVVTFIGGASSRE 725

Query: 845  IIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNS 904
            +I+Q+E +         KT   +F+V++T + +IL++++  R V W++L VDEGHRLK+ 
Sbjct: 726  VIKQHELYTPG------KTRRRRFDVIITAWNVILSEAAVFRKVKWDLLAVDEGHRLKSR 779

Query: 905  GSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQ 964
             S+L ++L S +   R+LLTGTPLQNN+ E+YNLL +L P  F       E+ +D  T +
Sbjct: 780  SSQLTTVLESCTSDFRILLTGTPLQNNLQELYNLLMYLNPEEFKEFEG-RERLSDEETKE 838

Query: 965  KVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIG 1024
            ++  LK  +  HMLRRLK D  +++P K E +VP +LSS+Q  +Y+ +L KNY  L    
Sbjct: 839  EIATLKPKLKKHMLRRLKTDVFKDMPQKVEVVVPAKLSSMQRRFYKELLAKNYSFLTATT 898

Query: 1025 KGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLY 1084
            +GV+  S+ N++MQLRK  NHPYL    EP+    + + ++ + AS K  LL  ML+ L 
Sbjct: 899  QGVS--SLNNLLMQLRKCANHPYLFDDAEPEVEDHDAMVKLLVGASGKTLLLDMMLRKLK 956

Query: 1085 KEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE--RVDGSVSVGDRQAAITRFNQ-DKSR 1141
            ++GHRVLIFSQMT++LDIL+D +      + Y   R+DG+  +  RQ  I  F++ D   
Sbjct: 957  EQGHRVLIFSQMTRMLDILQDIMMY----RGYHCCRLDGNTDILTRQEQIDEFSRPDSDA 1012

Query: 1142 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRAS 1201
            FVFLLSTR+ GLGINL TADT+II+DSD+NPHAD+QA+ RAHRIGQ   ++VYR V   +
Sbjct: 1013 FVFLLSTRAGGLGINLTTADTIIIFDSDWNPHADLQALARAHRIGQKNLVMVYRFVSVNT 1072

Query: 1202 VEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIE 1261
            VEERIL+ A++KL LDQ        + E++ +L+ G + LF +                 
Sbjct: 1073 VEERILRRAREKLRLDQAVRMDKLKKSELDQLLKSGAQGLFEE----------------- 1115

Query: 1262 EAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAE--- 1318
                                 QD+      +IV+D+  I  LLDR + Q+ S +  E   
Sbjct: 1116 ---------------------QDEA-----EIVYDDKVIDALLDRES-QAKSREAQEQSE 1148

Query: 1319 ---GDLENDMLGSVKATEWNEETTEDQAESPVAAVDDASAENSERKEENAVTGIEENEWD 1375
                  +ND+    K  + + +      E+PV   D A A +++          ++  W 
Sbjct: 1149 AEIAQAQNDLFADFKVAQLSTDAGAGD-EAPVGKEDGALAISTD----------DDEFWQ 1197

Query: 1376 RLLRVRLGAL 1385
            +LL+ R  AL
Sbjct: 1198 KLLKDRAAAL 1207


>gi|440792199|gb|ELR13427.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
            castellanii str. Neff]
          Length = 2160

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 296/712 (41%), Positives = 408/712 (57%), Gaps = 57/712 (8%)

Query: 576  TDKDVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVK--WVGKSNIHNSWIPESQ 633
            +D+D + G    G   K + E    E  QV  K + ++ + +    G+S +H  W+ ES 
Sbjct: 139  SDEDDEEGGHHKGDTTKSLFE----EPKQVIDKILCHKEVTEDGQTGQSFLHVEWLLESD 194

Query: 634  LKVLAKRKLENYKAKYGTTVINICDER------WKQPQRVI--SLRSSKDGTR--EAFVK 683
              +LA+R  +   A+Y      + DE       + Q  R++  ++ + +DG    +  VK
Sbjct: 195  --ILAERFGKTKLARYYRNPPLVYDEDKPFNPDFVQVDRILDETVETDEDGNEVTKYLVK 252

Query: 684  WTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVA 743
            W   PY+E TWE      L    +  +   QF+R      AS+  LP  + D +  E   
Sbjct: 253  WESTPYNESTWE------LSTDINDDEKIAQFKRTNQLPPASKG-LPE-RPDAE--EWRE 302

Query: 744  LTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFK 803
             TE PE   G  L  +QLE LNWL   W++ +N ILADEMGLGKTV + + +  L+   K
Sbjct: 303  YTESPEFKDGNRLRAYQLEGLNWLVFNWYQRRNSILADEMGLGKTVQSISTMWHLFTVEK 362

Query: 804  AKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKT 863
             + P LV+ PLST+ +W  E   W  ++NV+ YHG + AR +IR+YEW+  D        
Sbjct: 363  IRGPFLVIAPLSTIGHWKREVENWT-DMNVIVYHGSSAAREVIRKYEWNYLDAKG-RAIP 420

Query: 864  SSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLL 923
              +K+NVL+TTYEMILADS+ L+ + W   V+DE HRLKN  SKL   L ++SF   +LL
Sbjct: 421  GLFKWNVLVTTYEMILADSALLKTIDWRYTVIDEAHRLKNKNSKLLIELQTYSFSDILLL 480

Query: 924  TGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKK 983
            TGTPLQNN  E+++LLNFL P  F S   F   F DL  TQ+V+ L  L+ PH+LRR+K+
Sbjct: 481  TGTPLQNNTEELWSLLNFLDPEKFHSSEDFMTDFGDLKQTQQVQGLHDLLKPHLLRRMKE 540

Query: 984  DAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVC 1043
               ++I PK E +V VEL+  Q +YY+A+  KN   L     G    +MLNI+MQLRK C
Sbjct: 541  HVEKSIAPKEETIVEVELTVTQKKYYKAIYEKNTAFLTKGCSGGNVPNMLNIMMQLRKCC 600

Query: 1044 NHPYLIPGTEPDS----GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKL 1099
            NHPYLI G E          E +++M IK+S KL L+  +L  L   GH+VLIFSQM ++
Sbjct: 601  NHPYLINGVESQILNGLSDPESIYQMLIKSSGKLVLIDKLLPKLISGGHKVLIFSQMVRV 660

Query: 1100 LDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLA 1158
            LDILEDYLN  F   TYER+DG V   DRQAAI RF +  S R VFLL TR+ G+GINL 
Sbjct: 661  LDILEDYLN--FRKFTYERIDGGVRGNDRQAAIDRFCKKGSDRNVFLLCTRAGGVGINLT 718

Query: 1159 TADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ 1218
             ADTVII+DSD+NP  DIQA  R HRIGQ++ + VYRL+ R + E  + + A  KL LDQ
Sbjct: 719  AADTVIIFDSDWNPQNDIQAQARCHRIGQTQMVKVYRLITRGTYERHMFERASLKLGLDQ 778

Query: 1219 LFVNKSGS---------------QKEVEDILRWGTEELFNDSPGINGKDMGE 1255
              + K                  +KE++ +L++G  ++F +     G+D GE
Sbjct: 779  AVLGKMAENREDEKAGGEEKKLDKKEIDALLKYGAYDVFRE-----GQDEGE 825


>gi|326926799|ref|XP_003209584.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
            [Meleagris gallopavo]
          Length = 1837

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 290/716 (40%), Positives = 413/716 (57%), Gaps = 87/716 (12%)

Query: 614  FLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTTV 653
            +L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y    
Sbjct: 311  YLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWLAKVSPEDVEYFNCQ 370

Query: 654  INICDERWKQPQ---RVISLRSSKDGTREA----------------FVKWTGLPYDECTW 694
              +  E  KQ Q   RVI++++SK  T  A                  KW GLPY EC+W
Sbjct: 371  QELASELNKQYQIVERVIAVKTSKSATGHADFPANSRKTSSNDPEYLCKWMGLPYAECSW 430

Query: 695  EKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL-- 751
            E  DE  + +K+ H  D F    R   K   + D     K   Q+   VAL +QP  +  
Sbjct: 431  E--DEALISKKFQHCIDSFNN--RNNSKTIPTRD----CKVLKQRPRFVALKKQPSYIGS 482

Query: 752  KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVL 811
            +   L  +QLE LNWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P LV+
Sbjct: 483  ENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVV 542

Query: 812  VPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVL 871
            VPLST+ +W  EF +WAP +NVV Y G   +R +IR+YEW       ++ ++   KFN L
Sbjct: 543  VPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEW-------IHSQSKRLKFNAL 595

Query: 872  LTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNN 931
            +TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQN+
Sbjct: 596  ITTYEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNS 655

Query: 932  IGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPP 991
            + E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++P 
Sbjct: 656  LKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSLPA 714

Query: 992  KTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI-- 1049
            K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI  
Sbjct: 715  KVEQILRVEMSALQKQYYKWILTRNYKALSKGTRG-STSGFLNIVMELKKCCNHCYLIKP 773

Query: 1050 PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
            P        +E L  + I++S KL LL  +L  L   G+RVLIFSQM ++LDIL +YL I
Sbjct: 774  PEENERENGIETLQSL-IRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLTI 832

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDS 1168
            +  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+DS
Sbjct: 833  KHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDS 890

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------- 1221
            D+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +       
Sbjct: 891  DWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTG 950

Query: 1222 -----NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                 N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 951  RTVLDNNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 1003


>gi|19114572|ref|NP_593660.1| ATP-dependent DNA helicase Hrp1 [Schizosaccharomyces pombe 972h-]
 gi|15214054|sp|Q9US25.1|HRP1_SCHPO RecName: Full=Chromodomain helicase hrp1; AltName: Full=ATP-dependent
            helicase hrp1
 gi|6714825|emb|CAB66168.1| ATP-dependent DNA helicase Hrp1 [Schizosaccharomyces pombe]
          Length = 1373

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 269/674 (39%), Positives = 394/674 (58%), Gaps = 58/674 (8%)

Query: 611  SYEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAK---YG-------TTVI----- 654
            SY++L+KW   S++HN+W   S L  V   +K++NY  +   Y        TT       
Sbjct: 229  SYQYLIKWQEVSHLHNTWEDYSTLSSVRGYKKVDNYIKQNIIYDREIREDPTTTFEDIEA 288

Query: 655  --------NICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYS 706
                    N+  E +K  +R+++  ++++G  E FVKW  LPYD CTWE  D      YS
Sbjct: 289  LDIERERKNMLFEEYKIVERIVASETNEEGKTEYFVKWRQLPYDNCTWEDADVI----YS 344

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNW 766
               +   QF    L+++ S     +G     +     L +QP  +KGG +   QL  +NW
Sbjct: 345  MAPNEVYQF----LQRENSPYLPYKGVFYNTRPPYRKLEKQPSYIKGGEIRDFQLTGINW 400

Query: 767  LRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFAL 826
            +   WH+++N ILADEMGLGKTV    F+S L    K   P L++VPLST+P W    A 
Sbjct: 401  MAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVPLSTVPAWQETLAN 460

Query: 827  WAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLR 886
            W P+LN + Y G  ++RA IR+YE++      L+  +   KFN+LLTTYE IL D   L 
Sbjct: 461  WTPDLNSICYTGNTESRANIREYEFY------LSTNSRKLKFNILLTTYEYILKDKQELN 514

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
             + W+ L +DE HRLKNS S L+  L+ F   +R+L+TGTPLQNN+ E+ +L+NFL P  
Sbjct: 515  NIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNNLKELASLVNFLMPGK 574

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQA 1006
            F           +    + + +L++ + P +LRRLKKD  +++P K+ER++ VELS +Q 
Sbjct: 575  FYIRDELNFDQPNAEQERDIRDLQERLQPFILRRLKKDVEKSLPSKSERILRVELSDMQT 634

Query: 1007 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG-TEPDSGSVEFLHEM 1065
            E+Y+ +LTKNY+ L     G  Q S+LNIV++L+KV NHPYL PG  E      +   E 
Sbjct: 635  EWYKNILTKNYRALTGHTDGRGQLSLLNIVVELKKVSNHPYLFPGAAEKWMMGRKMTRED 694

Query: 1066 RIKA----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
             ++     S K+ LL  +L+ L  +GHRVLIFSQM ++L+IL +Y+++      Y+R+DG
Sbjct: 695  TLRGIIMNSGKMVLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLR--GYNYQRLDG 752

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            ++    R+ +I  FN  D   FVFLLSTR+ GLGINL TADTVII+DSD+NP AD+QAM 
Sbjct: 753  TIPASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMA 812

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQK------------ 1228
            RAHRIGQ   + VYR + + +VEE IL+ A++K++L+   ++   ++K            
Sbjct: 813  RAHRIGQKNHVNVYRFLSKDTVEEDILERARRKMILEYAIISLGVTEKSKNSKNDKYDAQ 872

Query: 1229 EVEDILRWGTEELF 1242
            E+  IL++G   +F
Sbjct: 873  ELSAILKFGASNMF 886


>gi|320164602|gb|EFW41501.1| SNF2 family DNA-dependent ATPase [Capsaspora owczarzaki ATCC 30864]
          Length = 2139

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 330/912 (36%), Positives = 473/912 (51%), Gaps = 150/912 (16%)

Query: 581  DVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIP------ESQL 634
            D  K+  G   K +    +++ A    + V  + LVKW G S+  N+W+         + 
Sbjct: 380  DTCKQYPGQPEKLLMHRVISQDADGSNQKV--DILVKWEGCSHDANAWVSGDWLTRAYRF 437

Query: 635  KVLAKRK-----LENYKAKYGTTVINICDERWKQPQRVISLR--SSKDGTREAFVKWTGL 687
            KV+  RK      + + ++ G    ++    W    RVI+ +  ++     +  VKW GL
Sbjct: 438  KVMGYRKRTDQPTDMWVSETGDAENDVVRADWMAVHRVIARKPGATPSAPDQVLVKWRGL 497

Query: 688  PYDECTWEK-------LDEP-----ALEKYSHLTDLFVQFERQTL--KKDASEDELPRGK 733
             Y+ CTWE        L+E      A E+            RQ +  K  ++   LP  K
Sbjct: 498  GYEACTWESSQSDKAGLNEAIQAFTAREQPIAEAIASAVAARQAMANKSGSAAKNLPVIK 557

Query: 734  GDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACA 793
                      L  QP+ L+ GAL  +QL+ LNWL     +  N ILADEMGLGKT+   +
Sbjct: 558  -------FHELKSQPDFLQSGALHDYQLDGLNWLIFSRSRGVNCILADEMGLGKTIQTVS 610

Query: 794  FISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHA 853
            F+ S+Y + +   P LV+ PLS   NW  EF  W P+LNV+ Y G  ++R ++RQ+E   
Sbjct: 611  FLRSVYAQTQLH-PFLVVTPLSLCSNWEREFGRWTPDLNVIVYTGSQESRQVLRQHECFR 669

Query: 854  SDPDNLNKKTSSY-------KFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGS 906
            +   + N  T+         KF+VL+T+YE++LAD S L+ + WE LVVDEGHRLKN  S
Sbjct: 670  ASSSSNNTTTTGSGSQGRVPKFHVLVTSYEILLADMSFLKSILWEELVVDEGHRLKNQES 729

Query: 907  KLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF--EEKF----NDL 960
            KLF  L +F+  HR+LLTGTPLQNN+ E++NL+ FL    F     F  +E       D 
Sbjct: 730  KLFKALQAFNIAHRLLLTGTPLQNNLQELFNLMCFLDYEKFEQQREFIVDETLITSAPDE 789

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
             TT +V  L  ++ PH+LRRLK D +Q+IPPKTE +VP ++S++Q +YYRA+LT+NY  L
Sbjct: 790  DTTDRVRRLHDMLRPHILRRLKDDVLQDIPPKTELVVPCKMSALQRQYYRAILTRNYAAL 849

Query: 1021 RNIGKGVAQQ-----------------SMLNIVMQLRKVCNHPYLIPGTEP----DSGSV 1059
                +GV Q                  +++NI+M+LRK  NHPYL PG EP    DS  V
Sbjct: 850  ---NQGVQQVITGTKSSMVVQPQQQRVTLMNILMELRKCTNHPYLFPGAEPEFAGDSAEV 906

Query: 1060 EFLH-EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
              +  +  ++AS KL LL  ML  L   GHRVLIFSQMT++LDILEDYL+    P  + R
Sbjct: 907  ADMQAQSLVQASGKLVLLDKMLPGLRARGHRVLIFSQMTRVLDILEDYLSHLQMP--FCR 964

Query: 1119 VDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DGS    DRQ  I +FN   S  F FLLSTR+ GLGINL TADT+I++DSDFNPH+D+Q
Sbjct: 965  LDGSTLNTDRQHLIDKFNAPNSPIFCFLLSTRAGGLGINLHTADTIIMFDSDFNPHSDMQ 1024

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK---SGSQKEVEDIL 1234
            A++RAHRIGQ K + VYRLV   ++EE ILQ A+KKL+L  + V K       + + ++L
Sbjct: 1025 ALSRAHRIGQKKPVTVYRLVTSDTIEEGILQRARKKLLLGHVVVEKLEDGIDAQGMSNLL 1084

Query: 1235 RWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIV 1294
            ++G + LF         ++  + +++                     +       +TK +
Sbjct: 1085 KYGVQSLFESDDAKQELNLMASGSTVSLT-----------------THAAAIASSTTKAM 1127

Query: 1295 WDENAIARLLDR-----------------------SNLQSGS-TDLAEGDLENDMLGSVK 1330
            ++++ I +LLD                         + Q GS +D   G   +  +G+V 
Sbjct: 1128 YEDSLIEQLLDNPAAFLLSSSGGGEDAAKQPASKSGDQQEGSDSDAIPGASGSAPIGAVS 1187

Query: 1331 ATE------------WNEETTEDQ----AESPVAAVD-DASAENSERKEENAVTGIEENE 1373
            A+             W EE TE +    A+ P  AVD DA   +             E+ 
Sbjct: 1188 ASAVDALKSFALAKVWQEEKTEAEPTPAADEPEQAVDPDAQPADQ-----------AEDY 1236

Query: 1374 WDRLLRVRLGAL 1385
            W++LLR R  AL
Sbjct: 1237 WEKLLRERHEAL 1248


>gi|323337858|gb|EGA79098.1| Chd1p [Saccharomyces cerevisiae Vin13]
          Length = 1329

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 289/686 (42%), Positives = 401/686 (58%), Gaps = 72/686 (10%)

Query: 611  SYEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY-------------GTTVINI 656
            +YEFL+KW  +S++HN+W   ES  +V   ++L+NY  ++                 I I
Sbjct: 210  NYEFLIKWTDESHLHNTWETYESIGQVRGLKRLDNYCKQFIIEDQQVRLDPYVTAEDIEI 269

Query: 657  CD----------ERWKQPQRVI-SLRSS-KDGTRE--AFVKWTGLPYDECTWEK---LDE 699
             D          E +  P+R+I S R+S +DGT +    VKW  L YDE TWE    + +
Sbjct: 270  MDMERERRLDEFEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWENATDIVK 329

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGD--CQQSEIVALTEQPEELKGGALF 757
             A E+  H  +      R+  K       LP+   +   Q+     L+ QP  +KGG L 
Sbjct: 330  LAPEQVKHFQN------RENSKI------LPQYSSNYTSQRPRFEKLSVQPPFIKGGELR 377

Query: 758  PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTM 817
              QL  +NW+   W K  N ILADEMGLGKTV   AFIS L    +   P +++VPLSTM
Sbjct: 378  DFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTM 437

Query: 818  PNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEM 877
            P WL  F  WAP+LN + Y G  K+R  IR+YE++ ++P     KT   KFNVLLTTYE 
Sbjct: 438  PAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFY-TNPRAKGXKT--MKFNVLLTTYEY 494

Query: 878  ILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYN 937
            IL D + L  + W+ + VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  
Sbjct: 495  ILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAA 554

Query: 938  LLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            L+NFL P  F      + +  D    + + +L + + P +LRRLKKD  +++P KTER++
Sbjct: 555  LVNFLMPGRFTIDQEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERIL 614

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP--- 1054
             VELS +Q EYY+ +LTKNY  L    KG    S+LNI+ +L+K  NHPYL    E    
Sbjct: 615  RVELSDVQTEYYKNILTKNYSALTAGAKG-GHFSLLNIMNELKKASNHPYLFDNAEERVL 673

Query: 1055 ---DSGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
                 G +   + +R  I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I
Sbjct: 674  QKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSI 733

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDS 1168
            +     ++R+DG+V    R+ +I  FN  D + FVFLLSTR+ GLGINL TADTV+I+DS
Sbjct: 734  K--GINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDS 791

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------- 1221
            D+NP AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   +       
Sbjct: 792  DWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDG 851

Query: 1222 NKSGSQK-----EVEDILRWGTEELF 1242
            NK   +      E+  IL++G   +F
Sbjct: 852  NKYTKKNEPNAGELSAILKFGAGNMF 877


>gi|213408777|ref|XP_002175159.1| chromodomain helicase hrp1 [Schizosaccharomyces japonicus yFS275]
 gi|212003206|gb|EEB08866.1| chromodomain helicase hrp1 [Schizosaccharomyces japonicus yFS275]
          Length = 1354

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 265/674 (39%), Positives = 389/674 (57%), Gaps = 60/674 (8%)

Query: 612  YEFLVKWVGKSNIHNSWI--PESQLKVLAKRKLENY-----------KAKYGTTVINI-- 656
            Y+F +KW G S++HN+W+  P++ +     +K++NY           +A   TT  +I  
Sbjct: 174  YQFFIKWSGVSHLHNTWMNYPDA-VSYRGYKKVDNYIKINIVQDRLIRADPTTTAEDIES 232

Query: 657  ----------CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYS 706
                        E +K  +RVI+     +   E FVKW  LPYD CTWE          +
Sbjct: 233  LDIERERKRMLFEEYKCVERVIAAEVGPEDQTEYFVKWNQLPYDACTWEDA--------A 284

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNW 766
             +  L  +  R  L+++ S     +G     +     L +QP  +KGG L   QL  LNW
Sbjct: 285  TIAQLAPEKVRSFLRRETSPYLPFKGVYYNTRPAYRKLDKQPSYIKGGELRDFQLTGLNW 344

Query: 767  LRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFAL 826
            +   WH+++N ILADEMGLGKTV    F+S L  + K   P L++VPLST+P W    A 
Sbjct: 345  MAYLWHRNENGILADEMGLGKTVQTVCFLSYLIHQLKQHGPFLIVVPLSTVPAWQETLAR 404

Query: 827  WAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLR 886
            WAP++N + Y G ++AR  IR YE++ S            KFN+LLTTYE IL D   L 
Sbjct: 405  WAPDINSICYTGNSEARTTIRDYEFYVS------TNARKLKFNILLTTYEYILKDRQELN 458

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
             + W+ L VDE HRLKNS S L+  L+ F   +R+L+TGTPLQNN+ E+ +L+NFL P  
Sbjct: 459  NIRWQYLAVDEAHRLKNSESSLYEALSQFRTANRLLITGTPLQNNLKELASLVNFLMPGR 518

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQA 1006
            F        +  +    + + +L++ + P +LRRLK+D  +++P KTER++ VELS +Q 
Sbjct: 519  FYIRDELNFEQPNEEQERNIRDLQQRLHPFILRRLKRDVEKSLPSKTERILRVELSDLQT 578

Query: 1007 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD-----SGSVEF 1061
            + Y+ +LT+NY+ L     G A  S+LNIV++L+K  NHPYL PG +         + E 
Sbjct: 579  QLYKNILTRNYRALSGAAAGNAHVSLLNIVVELKKASNHPYLFPGVQEKWMIGRKNTRED 638

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
                 +  S K+ LL  +L+ L ++GHRVLIF+QM K+L+IL +Y+N+      ++R+DG
Sbjct: 639  KLRGIVMNSGKMVLLDKLLQRLKQDGHRVLIFTQMVKVLNILAEYMNLR--GYNFQRLDG 696

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            ++    R+ AI  FN  D   FVFLLSTR+ GLGINL+TADTVII+DSD+NP AD+QAM 
Sbjct: 697  TIPAPVRRLAIDHFNSPDSPDFVFLLSTRAGGLGINLSTADTVIIFDSDWNPQADLQAMA 756

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQK------------ 1228
            RAHRIGQ   + VYR + + +VEE IL+ A++K++L+   ++   ++K            
Sbjct: 757  RAHRIGQKNHVSVYRFLSKDTVEEDILERARRKMILEYAIISLGVTEKSKNSKSDKITSQ 816

Query: 1229 EVEDILRWGTEELF 1242
            E+  IL++G   +F
Sbjct: 817  ELNAILKFGASNMF 830


>gi|361126616|gb|EHK98608.1| putative Chromodomain helicase hrp3 [Glarea lozoyensis 74030]
          Length = 1268

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 280/654 (42%), Positives = 385/654 (58%), Gaps = 54/654 (8%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKYGTTVINIC---------DERW 661
            +E+ VKW GKS+ H SW   + L  V   R++ENY  K     I +           E+W
Sbjct: 263  FEYYVKWQGKSHYHASWETTTTLTGVRGFRRVENYYKKIVLDDIYMSRGDDIQPEEKEKW 322

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                           + +RVI  R  ++GT E FVKW GL YD CTWE     + E    
Sbjct: 323  MLDRERASDALLDYTKVERVIGTREGEEGT-EYFVKWKGLYYDSCTWESASLIS-EISQE 380

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    +TL  D  E           +S  V + EQP  +  G L   Q+  LN+L
Sbjct: 381  AIDSFLDRGSRTLSSDRHE------SNPNTRSAHVPIREQPSYIMNGQLRAFQMTGLNFL 434

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K+KNVILADEMGLGKTV   AF + L  +   + P L++VPL+T+P W   F  W
Sbjct: 435  AYNWTKNKNVILADEMGLGKTVQTVAFTNWLRNDRNQQGPFLIVVPLTTIPAWADTFDNW 494

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            AP+LN V Y+G   ARA IR+YE        ++      KFNVLLT+YE ILADSS L  
Sbjct: 495  APDLNYVIYNGKEAARATIREYELL------IDGNPKRPKFNVLLTSYEYILADSSFLAQ 548

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ + VDE HRLKN  S+L+  L  F    R+L+TGTP+QN +GE+  L++FL P   
Sbjct: 549  IKWQFMAVDEAHRLKNRESQLYVKLLDFKAPSRLLITGTPVQNTLGELSALMDFLMPGEL 608

Query: 948  PSLSSFEEKFNDLTTT---QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
                  EE   DL+     +K+  L K + P++LRR K+    ++PPKTE+++ VELS +
Sbjct: 609  ----QIEEDM-DLSAEAAGEKIAALTKDIEPYILRRTKQKVENDLPPKTEKIIRVELSDV 663

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFL 1062
            Q EYY+ +LT+NY+ L    KG  +QS+LNI+M+L+K  NHPY+ P  E     GS    
Sbjct: 664  QLEYYKNILTRNYKALNEGSKG-QKQSLLNIMMELKKASNHPYMFPNAEDKIIKGSTRRD 722

Query: 1063 HEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             +++  I +S K+ LL  +L  L ++GHRVLIFSQM K+LDIL DYL +      ++R+D
Sbjct: 723  DQLKGLIASSGKMMLLDRLLAKLKRDGHRVLIFSQMVKMLDILGDYLQLR--SYQFQRLD 780

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++   R+ AI  FN + S  F FLLSTR+ GLGINL TADTVII+DSD+NP AD+QAM
Sbjct: 781  GTIAAAPRRLAIDHFNAEGSNDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAM 840

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
             RAHRIGQ K + +YRLV + +VEE IL+ A+ KLML+ + + +  + KE +++
Sbjct: 841  ARAHRIGQKKPVSIYRLVSKETVEEEILERARNKLMLEFVTIQRGVTDKERKEL 894


>gi|449471687|ref|XP_002197759.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Taeniopygia
            guttata]
          Length = 1794

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 289/717 (40%), Positives = 415/717 (57%), Gaps = 87/717 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 270  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWLGKVSPEDVEYFNC 329

Query: 653  VINICDERWKQPQ---RVISLRSSKDGT----------------REAFVKWTGLPYDECT 693
               +  E  KQ Q   RVI++++SK  T                 E   KW GLPY EC+
Sbjct: 330  QQELASELNKQYQIVERVIAVKTSKSATGHSDFPANSRKSSSNDPEYLCKWMGLPYAECS 389

Query: 694  WEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK 752
            WE  DE  + +K+ H  D F    R   K   + D     K   Q+   VAL +QP  + 
Sbjct: 390  WE--DEALISKKFQHCIDSFNS--RNNSKTIPTRD----CKVLKQRPRFVALKKQPSYIG 441

Query: 753  GG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLV 810
            G    L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P LV
Sbjct: 442  GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLV 501

Query: 811  LVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNV 870
            +VPLST+ +W  EF +WAP +NVV Y G   +R +IR+YEW       ++ ++   KFN 
Sbjct: 502  VVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEW-------IHSQSKRLKFNA 554

Query: 871  LLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQN 930
            L+TTYE++L D + L  + W  L VD+ HRLKN  S L+  L  F   HR+L+TGTPLQN
Sbjct: 555  LITTYEILLKDKTVLGSINWAFLGVDQAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQN 614

Query: 931  NIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
            ++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++P
Sbjct: 615  SLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSLP 673

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI- 1049
             K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI 
Sbjct: 674  AKVEQILRVEMSALQKQYYKWILTRNYKALSKGTRG-STSGFLNIVMELKKCCNHCYLIK 732

Query: 1050 -PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
             P        +E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL 
Sbjct: 733  PPEENERENGLETLQSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLT 791

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYD 1167
            I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+D
Sbjct: 792  IKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFD 849

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------ 1221
            SD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +      
Sbjct: 850  SDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTT 909

Query: 1222 ------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                  N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 910  GRTVLDNNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 963


>gi|444321550|ref|XP_004181431.1| hypothetical protein TBLA_0F03770 [Tetrapisispora blattae CBS 6284]
 gi|387514475|emb|CCH61912.1| hypothetical protein TBLA_0F03770 [Tetrapisispora blattae CBS 6284]
          Length = 1507

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 286/685 (41%), Positives = 392/685 (57%), Gaps = 72/685 (10%)

Query: 612  YEFLVKWVGKSNIHNSWIP-ESQLKVLAKRKLENYKAKY-------------GTTVINIC 657
            YEF  KW  +S++HNSW   ES  +V   ++L+NY  ++                 I I 
Sbjct: 231  YEFFTKWTNQSHLHNSWESYESLGQVRGLKRLDNYCKQFIIQDQSIRLDPSITAEDIEIM 290

Query: 658  D----------ERWKQPQRVIS---LRSSKDGTR-EAFVKWTGLPYDECTWEK---LDEP 700
            D          E +K+P+R+I    +    D T+ +  VKW+ L Y+E TWE    +   
Sbjct: 291  DLERERRLDEFEEFKKPERIIDSDRITLDDDTTQLQYLVKWSRLNYNEATWENSADIVRI 350

Query: 701  ALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQS--EIVALTEQPEELKGGALFP 758
            A E+  H  +              +   LP+   +   S  +   LTEQP+ + GG L  
Sbjct: 351  APEQVKHFQNRI------------NSKILPQYSTNFGNSRPKFQKLTEQPDFIHGGELRD 398

Query: 759  HQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
             QL  +NW+   W K+ N ILADEMGLGKTV   AFIS L    K + P LV+VPLSTMP
Sbjct: 399  FQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIYSRKQQGPHLVVVPLSTMP 458

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
             W   F  WAP LN + Y G  K+R  IR YE++ ++P    KK    KFNVLLTTYE I
Sbjct: 459  AWQETFEKWAPGLNCIYYMGNEKSRETIRDYEFY-TNPQAKTKK--HLKFNVLLTTYEYI 515

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            L D   L  + W+ L VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  L
Sbjct: 516  LKDQPVLGNIKWQFLAVDEAHRLKNAESSLYEALNSFKVGNRLLITGTPLQNNIKELAAL 575

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            +NFL P  F      + +  D    + +  L + + P +LRRLKKD  +++P KTER++ 
Sbjct: 576  VNFLMPGRFTIDQEIDFENQDKEQEEYIRNLHERLQPFILRRLKKDVEKSLPSKTERILR 635

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP---- 1054
            VELS IQ +YY+ +LTKNY  L    KG  Q S+LNI+ +L+K  NHPYL    E     
Sbjct: 636  VELSDIQTDYYKNILTKNYSALTAGSKG-GQFSLLNIMNELKKASNHPYLFNNAEERVLQ 694

Query: 1055 ----DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIE 1110
                 + S E +    I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I+
Sbjct: 695  KFGDGNMSKENILRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIK 754

Query: 1111 FGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSD 1169
                 ++R+DG+V    R+ +I  FN  D + FVFLLSTR+ GLGINL TADTV+I+DSD
Sbjct: 755  --GINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSD 812

Query: 1170 FNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN------- 1222
            +NP AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   ++       
Sbjct: 813  WNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGN 872

Query: 1223 -----KSGSQKEVEDILRWGTEELF 1242
                    +  E+ +IL++G   +F
Sbjct: 873  KLQKKNEPNTAELSEILKFGAGNMF 897


>gi|327269727|ref|XP_003219644.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like [Anolis
            carolinensis]
          Length = 3008

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 281/668 (42%), Positives = 389/668 (58%), Gaps = 68/668 (10%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK-----RKLENYKAK-YGTTVINICDERWKQPQ-- 665
            F VK+   S +H  W   + ++VL K     +K++ +KAK      ++  D+    P   
Sbjct: 819  FYVKYKNFSYLHCQW---ASVEVLDKDRRIQQKIKRFKAKQLQNKFLSEIDDELFNPDYV 875

Query: 666  ---RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQF 715
               R++ +  SKD   E      VKW  LPY++ TWE    +D+  +E++  L  +  Q 
Sbjct: 876  EVDRIMDISCSKDDNGEPVTHYLVKWCSLPYEDSTWESKQDIDQAKIEEFEKL--MARQP 933

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSK 775
            E + +++  ++D                L    E      L  +QLE LNWL   W+ ++
Sbjct: 934  ETERVERPPADD-------------WKKLESSREYKINNKLREYQLEGLNWLLFNWYNTR 980

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV 
Sbjct: 981  NCILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVV 1038

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+ YE +  D      K  SYKF+ ++TT+EMIL D   LR +PW  +V+
Sbjct: 1039 YHGSQASRRMIQSYEMYFKDAQGRAIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVI 1097

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S+F +
Sbjct: 1098 DEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSESTFMQ 1157

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
            +F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1158 EFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEK 1217

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE------------PDSGSVEFLH 1063
            N+  L   G      ++LN +M+LRK CNHPYLI G E            PD  S +F  
Sbjct: 1218 NFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNPD--SPDFQL 1275

Query: 1064 EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
            +  I+A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V
Sbjct: 1276 QAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRV 1333

Query: 1124 SVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
                RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R 
Sbjct: 1334 RGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1393

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEV 1230
            HRIGQSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+
Sbjct: 1394 HRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEI 1453

Query: 1231 EDILRWGT 1238
            ED+LR G 
Sbjct: 1454 EDLLRKGA 1461


>gi|326427315|gb|EGD72885.1| hypothetical protein PTSG_12193 [Salpingoeca sp. ATCC 50818]
          Length = 2049

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 281/670 (41%), Positives = 394/670 (58%), Gaps = 50/670 (7%)

Query: 597  PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYG--TTVI 654
            P    S+  KG    +E L KW   S++H+SW P   L     +K +NY A++G  T   
Sbjct: 943  PVAVTSSVFKG---DWELLCKWEQLSHLHDSWAPLKWLMTQFPQKTKNYVARHGLDTDHP 999

Query: 655  NICD------ERWKQP-----QRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPAL- 702
             + D      + W  P     +R+IS R   DG      KW GL Y+  TWE   +P+L 
Sbjct: 1000 EMFDPPKNTAKAWIPPSYTALERLISFRHL-DGQNWFLAKWRGLDYEHVTWE---QPSLL 1055

Query: 703  EKYSHLTDLFVQFERQT--LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPH- 759
            ++     +  V+++R+   LK        P        S     TEQP  + G  L  H 
Sbjct: 1056 KRLPGYKEAVVEYKRRQHGLKPFVKRRPKP------NPSTFKGFTEQPPYIGGDGLQLHE 1109

Query: 760  -QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
             QLE LN+L   W  + +VILADEMGLGKT+ A + IS +   +  ++  LV+VPLST  
Sbjct: 1110 YQLEGLNFLADAWISNNSVILADEMGLGKTIQAISLISWMAHAY-GRMQFLVVVPLSTCM 1168

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
            NW  EF LWAP++  V Y G + AR +I  +E        L K     +F+V++T++E+ 
Sbjct: 1169 NWQREFKLWAPDIVTVVYTGHSNARKMIEGFE--------LPKVKGKPRFHVIITSWEVA 1220

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            + ++S L+   +++LVVDEGHRLKN+ SKL  +LNSF+ +HRVLLTGTPLQNN+ E+YNL
Sbjct: 1221 MHNASVLKHFAFDLLVVDEGHRLKNAQSKLHRVLNSFACKHRVLLTGTPLQNNLQELYNL 1280

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            L FL PA F    + +         QK+E+L+  + PH+LRR K D M+N+P K E MVP
Sbjct: 1281 LKFLDPAKFKDFEA-DPALGVEGMRQKIEDLRPQLQPHLLRRTKADVMKNLPKKVEVMVP 1339

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGS 1058
             E+S +Q + Y+  L KNY +L N     +++ + +++  LRK  NHPYL  GTEP+  +
Sbjct: 1340 CEMSHLQKQLYKHALEKNYTVLTN---AKSKKGLKSLLTNLRKCSNHPYLFEGTEPEFPT 1396

Query: 1059 VEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
            ++   E  +KAS KL L+  ML  L   GHRVLIFSQ T +LDILED     +    + R
Sbjct: 1397 LDETMERLVKASGKLLLMDKMLTKLKASGHRVLIFSQWTHVLDILEDLF--VYRKHKFYR 1454

Query: 1119 VDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DG   + DR+  IT FN+  S  F FLLSTR+ GLGINL TADTV IYDSD+NPH D Q
Sbjct: 1455 LDGDTDILDREQRITDFNRPNSDVFAFLLSTRAGGLGINLNTADTVFIYDSDWNPHMDNQ 1514

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---NKSGSQKEVEDIL 1234
            A+ RAHRIGQ + ++VYRLV + +V+E+I++ A+KKL LD+  V   +K+   K++E +L
Sbjct: 1515 AIARAHRIGQKRLVMVYRLVAKGTVDEKIVEQARKKLALDEAVVEQKHKAMDAKDLEQLL 1574

Query: 1235 RWGTEELFND 1244
            R G   +F D
Sbjct: 1575 RHGAARIFQD 1584



 Score = 71.2 bits (173), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKND 124
           C++C   G LLCCD CPR YHL C+ P L  +P G W CP C  +ND
Sbjct: 721 CIVCQQSGELLCCDGCPRVYHLDCVTPRLAEVPEGDWFCPACA-RND 766


>gi|351714273|gb|EHB17192.1| Chromodomain-helicase-DNA-binding protein 2 [Heterocephalus glaber]
          Length = 1714

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 288/702 (41%), Positives = 405/702 (57%), Gaps = 71/702 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 306  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 365

Query: 653  VINICDERWKQPQ---RVI--SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
               +  E  KQ Q   RVI  S + +     E   KW GLPY EC+WE  DE  + K  H
Sbjct: 366  QQELASELNKQYQIVERVIAHSRKPAPSNEPEYLCKWMGLPYSECSWE--DEALIGKKFH 423

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG--ALFPHQLEALN 765
                   F  +   K     E    K   Q+   VAL +QP  L G    L  +QLE LN
Sbjct: 424  --SCIDSFHSRNNSKTIPTREC---KALKQRPRFVALKKQPAYLGGENLELRDYQLEGLN 478

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            WL   W KS +VILADEMGLGKT+   +F+S L+ + +   P L++VPLST+ +W  EF 
Sbjct: 479  WLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFE 538

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
            +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN L+TTYE++L D + L
Sbjct: 539  IWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFNALITTYEILLKDKTVL 591

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
              + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+ P 
Sbjct: 592  GSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPE 651

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
             F     FEE           + L K++ P +LRR+KKD  +++P K E+++ VE+S++Q
Sbjct: 652  KFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQ 710

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVEFLH 1063
             +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI  P         E L 
Sbjct: 711  KQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILL 769

Query: 1064 EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
             + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL I+  P  ++R+DGS+
Sbjct: 770  SL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYP--FQRLDGSI 826

Query: 1124 SVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
                R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA  RA
Sbjct: 827  KGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARA 886

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKSG----- 1225
            HRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +            N SG     
Sbjct: 887  HRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLENNSGRSNSN 946

Query: 1226 --SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
              +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 947  PFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 985


>gi|346321814|gb|EGX91413.1| chromodomain helicase (Chd1), putative [Cordyceps militaris CM01]
          Length = 1657

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 276/641 (43%), Positives = 391/641 (60%), Gaps = 51/641 (7%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENY---------KAKYGTTVINICDERW 661
            +E+ +KW GKSN+H++W   ES   V   RK+ENY           ++G  V     E++
Sbjct: 292  FEYFIKWQGKSNLHDTWETIESLRNVRGFRKVENYFRKVVEYELDVRFGEDVAPEIKEQY 351

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                           + +RV+++R  +DG  E FVKW GL Y+ECTWE  D+        
Sbjct: 352  FLDRARDEEAFEDYTKVERVVNVRDGEDGP-EYFVKWKGLTYEECTWEVADD-------- 402

Query: 708  LTDLFVQFERQTLKKDASEDELPRGK--GDCQQSEIVALTEQPEELKGGALFPHQLEALN 765
            +  +F     Q L + AS   L   K      +S +  L EQP  ++ G L P QL  LN
Sbjct: 403  INGVFQDKIDQYLDR-ASRSWLSDRKETNPDTRSRMKKLDEQPGYIQNGELRPFQLRGLN 461

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            +L   W +  NVILADEMGLGKTV   +F+S L    K + P LV+ PLS +P W   F 
Sbjct: 462  FLCLNWCRGNNVILADEMGLGKTVQTVSFLSWLRNCRKQEGPSLVVAPLSVIPAWCDTFN 521

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             W+P+LN V Y G   AR+IIR+ E      D   KK    KFNVL+T+YE IL D   L
Sbjct: 522  NWSPDLNYVVYLGPEDARSIIRENELLV---DGNPKKP---KFNVLVTSYEFILQDWQFL 575

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
            + + ++ L VDE HRLKN+ S+L+  L  F    +VL+TGTP+QNN+ E+  LL+FL P 
Sbjct: 576  QSIKFQCLAVDEAHRLKNAESQLYMRLLGFGIPCKVLITGTPIQNNLSELAALLDFLNPG 635

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
                +    E F+    ++K++EL   +AP++LRR K+    ++PPKTE+++ VELS +Q
Sbjct: 636  KV-KIDEDLESFDANDASEKLQELHSAIAPYILRRTKETVESDLPPKTEKIIRVELSDVQ 694

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSV--EF 1061
             +YY+ +LT+NY  L +   G  + S+LNI+M+L+K+ NHPY+ PG E    +GSV  E 
Sbjct: 695  LDYYKNILTRNYAALSDASSG-HKNSLLNIMMELKKISNHPYMFPGAEERVLAGSVRRED 753

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
            L +  + +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DY+++  G K ++R+DG
Sbjct: 754  LIKGLVTSSGKMMLLDQLLSKLKKDGHRVLIFSQMVRMLDILGDYMSLR-GYK-FQRLDG 811

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            +++ G R+ AI  FN D S  F FLLSTR+ GLGINL TADTV+I+DSD+NP AD+QAM 
Sbjct: 812  TIAAGPRRMAINHFNADDSDDFCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMA 871

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            RAHRIGQ + + +YRLV + +VEE +L+ A+ KL+L+ L +
Sbjct: 872  RAHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTI 912


>gi|432090998|gb|ELK24214.1| Chromodomain-helicase-DNA-binding protein 2 [Myotis davidii]
          Length = 1889

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 288/703 (40%), Positives = 409/703 (58%), Gaps = 73/703 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 384  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 443

Query: 653  VINICDERWKQPQ---RVI--SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPAL-EKYS 706
               +  E  KQ Q   RVI  S + +     E   KW GLPY EC+WE  DE  + +K+ 
Sbjct: 444  QQELASELNKQYQIVERVIAHSRKPAPSNEPEYLCKWMGLPYSECSWE--DEALIGKKFQ 501

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGAL--FPHQLEAL 764
               D F    R   K   + +     K   Q+   VAL +QP  L G +L    +QLE L
Sbjct: 502  GCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYLGGESLELRDYQLEGL 555

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P L++VPLST+ +W  EF
Sbjct: 556  NWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREF 615

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
             +WAP +N+V Y G   +R  IR+YEW       ++ +T   KFN L+TTYE++L D + 
Sbjct: 616  EIWAPEINIVVYIGDLMSRNTIREYEW-------IHSQTKRLKFNALITTYEILLKDKTV 668

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+ P
Sbjct: 669  LGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP 728

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F     FEE           + L K++ P +LRR+KKD  +++P K ER++ VE+S++
Sbjct: 729  EKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVERILRVEMSAL 787

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVEFL 1062
            Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI  P         E L
Sbjct: 788  QKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLIKPPEENERENGQEIL 846

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL I+  P  ++R+DGS
Sbjct: 847  LSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYP--FQRLDGS 903

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA  R
Sbjct: 904  IKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR 963

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKSG---- 1225
            AHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +            N SG    
Sbjct: 964  AHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLENNSGRSNS 1023

Query: 1226 ---SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
               +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 1024 NPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 1063


>gi|444720770|gb|ELW61544.1| Chromodomain-helicase-DNA-binding protein 7 [Tupaia chinensis]
          Length = 2574

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 386/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 326  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 385

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 386  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRRDIDQAKIEEFEKL---------- 435

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 436  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 489

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 490  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 547

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 548  GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 606

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 607  AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 666

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 667  GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 726

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 727  TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 786

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 787  QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 844

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 845  RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 904

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 905  QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 964

Query: 1235 RWGT 1238
            R G 
Sbjct: 965  RKGA 968


>gi|449281262|gb|EMC88383.1| Chromodomain-helicase-DNA-binding protein 2 [Columba livia]
          Length = 1719

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 288/717 (40%), Positives = 413/717 (57%), Gaps = 87/717 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 305  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWLGKVSPEDVEYFNC 364

Query: 653  VINICDERWKQPQ---RVISLRSSKDGT----------------REAFVKWTGLPYDECT 693
               +  E  KQ Q   RVI++++SK  T                 E   KW GLPY EC+
Sbjct: 365  QQELASELNKQYQIVERVIAMKTSKSATGHSDFPANSRKTSSNDPEYLCKWMGLPYAECS 424

Query: 694  WEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL- 751
            WE  DE  + +K+ H  D F    R   K   + D     K   Q+   V L +QP  + 
Sbjct: 425  WE--DEALISKKFQHCIDSFNN--RNNSKTIPTRD----CKVLKQRPRFVTLKKQPSYIG 476

Query: 752  -KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLV 810
             +   L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P LV
Sbjct: 477  SENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLV 536

Query: 811  LVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNV 870
            +VPLST+ +W  EF +WAP +NVV Y G   +R +IR+YEW       ++ ++   KFN 
Sbjct: 537  VVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEW-------IHSQSKRLKFNA 589

Query: 871  LLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQN 930
            L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQN
Sbjct: 590  LITTYEILLKDKAVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQN 649

Query: 931  NIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
            ++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++P
Sbjct: 650  SLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSLP 708

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI- 1049
             K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI 
Sbjct: 709  AKVEQILRVEMSALQKQYYKWILTRNYKALSKGTRG-STSGFLNIVMELKKCCNHCYLIK 767

Query: 1050 -PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
             P        +E L  + I++S KL LL  +L  L   G+RVLIFSQM ++LDIL +YL 
Sbjct: 768  PPEENERENGLETLQSL-IRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLT 826

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYD 1167
            I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+D
Sbjct: 827  IKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFD 884

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------ 1221
            SD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +      
Sbjct: 885  SDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTT 944

Query: 1222 ------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                  N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 945  GRTVLDNNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 998


>gi|313247391|emb|CBY15642.1| unnamed protein product [Oikopleura dioica]
          Length = 1498

 Score =  478 bits (1230), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 294/679 (43%), Positives = 400/679 (58%), Gaps = 77/679 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTT-------VINICDER----- 660
            E+  K+ G S     W+PE +++  +      Y  K           V N  D       
Sbjct: 238  EYFCKFEGLSYWDTQWVPEIRMEQHSIHMWRTYHRKLSPDCEPDHEDVENFDDAEMAEKY 297

Query: 661  --------WKQPQRVISLRSS--KDGTREAFVKWTGLPYDECTWEK-------LDEPALE 703
                    W   +RVI  RS+      +E  V W  L Y ECTWE        L E    
Sbjct: 298  YKYHIQPEWLNIRRVIKHRSNAYNPKIKEYLVLWRQLAYSECTWENEEKDIVGLTEAIKS 357

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKG-DCQQSEIVALTEQPEELKGG--ALFPHQ 760
             Y H  ++  +      KK+       RGK  D    ++    +QP+ +K    AL  +Q
Sbjct: 358  YYDHRKNMIAE------KKNK------RGKNKDKTTKKVKPYEDQPQYIKDLDLALHEYQ 405

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            LE LNWLR  W +  NVILADEMGLGKT+ +  FI SL  E  +K P L+ VPLST+PNW
Sbjct: 406  LEGLNWLRFSWSQDTNVILADEMGLGKTIQSAVFIRSLMMENNSKGPFLISVPLSTLPNW 465

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
              EF LWAP L VV YHG  K+RA+IR+ E          +     KF+VLLT+YEM+  
Sbjct: 466  EREFELWAPELYVVSYHGDGKSRAVIRENEL---------RDGCQTKFHVLLTSYEMVSM 516

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D++ L+ + W  L++DE HRLK++ S  F +L++++  H+VLLTGTPLQNN+ E++ LLN
Sbjct: 517  DNALLQSIDWACLIIDEAHRLKSNRSLFFKVLSAYNVAHKVLLTGTPLQNNLEELFYLLN 576

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
            FL P  F  L SF + F  ++   +V++L  L+  HMLRRLK D ++ +  K E +V   
Sbjct: 577  FLVPEKFTDLQSFLDDFAVISKEDQVKKLHDLLGAHMLRRLKADVLKGMKGKVEMIVRTG 636

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            L+++Q +YY+ +LT+NY+ L+ +  G    S+ N++M+L+K+CNHPYL    +  S S  
Sbjct: 637  LTAMQKKYYKFVLTRNYEALK-VKSGT---SLTNVLMELKKICNHPYL---NDKCSESAA 689

Query: 1061 FLHEMRIKAS------AKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPK 1114
             L     + S       KL L+  MLK L ++GHRVLIFSQMTKLLD+LEDYL  E    
Sbjct: 690  RLSNNAFEGSELTANCGKLLLMQKMLKKLKEQGHRVLIFSQMTKLLDLLEDYLEYE--QY 747

Query: 1115 TYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPH 1173
             YER+DGSV+   RQ AI RFN+  S  F+FLLSTR+ GLGINLATADTVIIYDSD+NPH
Sbjct: 748  KYERIDGSVTGSIRQQAIDRFNKPGSESFIFLLSTRAGGLGINLATADTVIIYDSDWNPH 807

Query: 1174 ADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG 1225
             DIQA +RAHRIGQ  ++L+YR V + SVEER+ Q+AKKK+ML+ L +        N + 
Sbjct: 808  NDIQAFSRAHRIGQKNKVLIYRFVTQNSVEERVAQVAKKKMMLNHLVIRPGIGQKNNAAI 867

Query: 1226 SQKEVEDILRWGTEELFND 1244
            S+ E++DILR+G+ ELF +
Sbjct: 868  SKNEMDDILRFGSAELFKE 886



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 10/85 (11%)

Query: 46  RNTPSAKRRLKNEINA----------DRSSTKKKGNDGYYYECVICDLGGNLLCCDSCPR 95
           R + ++ RR KNE             D +  K  G   +   C  C  GG LL C+SCPR
Sbjct: 109 RESRTSSRRTKNEEKTLREPEEDDFQDLAEVKDAGPIEHNELCQFCKSGGELLACESCPR 168

Query: 96  TYHLQCLDPPLKRIPNGKWQCPKCT 120
            YH +CL+PP   IP+G W CP C+
Sbjct: 169 VYHPKCLNPPQTEIPDGDWFCPYCS 193


>gi|157819999|ref|NP_001100993.1| chromodomain-helicase-DNA-binding protein 2 [Rattus norvegicus]
 gi|149057183|gb|EDM08506.1| chromodomain helicase DNA binding protein 2 (predicted) [Rattus
            norvegicus]
          Length = 1834

 Score =  478 bits (1230), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 291/719 (40%), Positives = 415/719 (57%), Gaps = 90/719 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 313  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 372

Query: 653  VINICDERWKQPQ---RVISLRSSKDG-----------------TREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 373  QQELASELNKQYQIVERVIAVKTSKSALGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 432

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+    D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 433  SWE--DEALIGKKFQSCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 484

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 485  GGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 544

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 545  IVVPLSTLTSWQREFEIWAPEVNVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 597

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 598  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 657

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 658  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 716

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 717  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 775

Query: 1050 PG---TEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDY 1106
                 +E ++G  E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +Y
Sbjct: 776  RAPEDSERETGQ-EVLQSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEY 833

Query: 1107 LNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVII 1165
            L I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I
Sbjct: 834  LTIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVI 891

Query: 1166 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---- 1221
            +DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +    
Sbjct: 892  FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMD 951

Query: 1222 --------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                    N SG       +++E+  IL++G E+LF +   I G++       I+E +R
Sbjct: 952  TTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKE---IEGEESEPQEMDIDEILR 1007


>gi|448519638|ref|XP_003868122.1| Chd1 protein [Candida orthopsilosis Co 90-125]
 gi|380352461|emb|CCG22687.1| Chd1 protein [Candida orthopsilosis]
          Length = 1387

 Score =  478 bits (1230), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 284/725 (39%), Positives = 403/725 (55%), Gaps = 83/725 (11%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKY----------------GTT 652
            + Y F +KW   S++HN+W   + LK     RK++NY  ++                   
Sbjct: 181  LDYLFKIKWTDASHLHNTWETYNDLKEFKGFRKVDNYIKQFIIYDNEVRNDPLTTKEDIE 240

Query: 653  VINICDERWKQPQ-------RVI-SLRSSKDGTR--EAFVKWTGLPYDECTWEKLDEPAL 702
             ++I  ER +  Q       R++ S R+ KDG    E FVKW  L YDEC+WE  +E A 
Sbjct: 241  AMDIEKERRRDEQEEYVHVERIVDSQRTEKDGENRLEYFVKWRRLYYDECSWEDAEEIAR 300

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLE 762
                 ++    +   + L   ++   L       Q+     L +QP  +K G L   QL 
Sbjct: 301  IAPEQVSKYQQRLNSKILPNFSANYPL------SQRPRFEKLVKQPVFIKNGELRDFQLT 354

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNW+   W +++N ILADEMGLGKTV   AF+S L    +   P LV+VPLST+P W  
Sbjct: 355  GLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHLVVVPLSTIPAWQE 414

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
             F  W+P++N + Y G  +AR  IR YEW+  +           KFNVLLTTYE IL D 
Sbjct: 415  TFEKWSPDINCIYYLGNGEARRTIRDYEWYTPN--------GKPKFNVLLTTYEYILKDR 466

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L  + W+ L VDE HRLKN+ S L+  L SF   +R+L+TGTPLQNN+ E+  L NFL
Sbjct: 467  NELGSLKWQFLAVDEAHRLKNADSSLYESLKSFRCANRLLITGTPLQNNLKELAALCNFL 526

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F      + +  D      +++L+K + P++LRRLKKD   ++P KTER++ VELS
Sbjct: 527  MPGKFDIEQEIDFETPDEEQESYIKDLQKKIKPYILRRLKKDVETSLPSKTERILRVELS 586

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE------PDS 1056
             IQ +YY+ ++TKNY  L N G   +Q S+LN++ +L+K  NHPYL  G E        S
Sbjct: 587  DIQTDYYKNIITKNYAAL-NAGNNGSQISLLNVMSELKKASNHPYLFDGAEERVLARAGS 645

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
             + E + +  I +S K+ LL  +L  L KEGHRVLIFSQM ++LDIL DY++I+     +
Sbjct: 646  PTRENILKGMIMSSGKMVLLEQLLSRLKKEGHRVLIFSQMVRMLDILGDYMSIK--GYQF 703

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            +R+DG +    R+ +I  FN   S+ F FLLSTR+ GLGINL TADTVII+DSD+NP AD
Sbjct: 704  QRLDGGIPSSQRRISIDHFNAPDSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQAD 763

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NK 1223
            +QAM RAHRIGQ   + VYR V + +VEE+IL+ A+KK++L+   +            NK
Sbjct: 764  LQAMARAHRIGQKNHVSVYRFVSKDTVEEQILERARKKMILEYAIISLGITDPNAKKSNK 823

Query: 1224 S-GSQKEVEDILRWGTEELFNDSPG-------------------INGKDMGENNTSIEEA 1263
            +  S  E+  IL++G   +F D+                     +   ++GE+N   EE 
Sbjct: 824  TEPSTSELSQILKFGASTMFKDNDNQQKLENLNLDEVLNHAEDHVTTPELGESNLGSEEF 883

Query: 1264 VRDLE 1268
            ++  E
Sbjct: 884  LKQFE 888


>gi|302842935|ref|XP_002953010.1| hypothetical protein VOLCADRAFT_30242 [Volvox carteri f. nagariensis]
 gi|300261721|gb|EFJ45932.1| hypothetical protein VOLCADRAFT_30242 [Volvox carteri f. nagariensis]
          Length = 791

 Score =  478 bits (1229), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 292/694 (42%), Positives = 409/694 (58%), Gaps = 72/694 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKRK------------------------LENYKAK 648
            E+ VKW G+S +H SW PE  L  + + +                         E  +A+
Sbjct: 103  EYHVKWKGESYLHCSWEPEEGLAKMYRVRGVVCVCWGGGGEGEGGRGLRESREAEEREAE 162

Query: 649  YGTTVINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
                 ++  +  W +  R+++ +  +    E  VKW  L YD+CTWE   E  +  Y   
Sbjct: 163  ETGEYVHGVNPLWLEVDRILAEQKGR-AQMEYLVKWKDLGYDQCTWEL--ESDIAGY--- 216

Query: 709  TDLFVQFERQTLKKD--ASEDELPRGKGD----------CQQ---SEIVALTEQPEELKG 753
             D  +Q  R+T  +   A + +LP  K            C+    S        P+ L G
Sbjct: 217  -DAAIQRFRETKWRRGLAGDLDLPPVKRRRRRLRAAWRMCKSRWGSGTRKWHSTPDFLHG 275

Query: 754  GALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVP 813
            G+L P+QLE LNWL   +     VILADEMGLGKTV   AF++SL+ E   +LP LV+VP
Sbjct: 276  GSLHPYQLEGLNWLYHKYCTGDAVILADEMGLGKTVQTIAFLASLHAEC-CELPHLVVVP 334

Query: 814  LSTMPNWLAEFALWAPNLNVVEYHGCAKARAI--IRQYEWHASDPDNLNKKTSSYKFNVL 871
            LSTM NW  EF  WAPNLNVV   G  +AR +  +++  +H+   D  + K    KF+VL
Sbjct: 335  LSTMRNWEREFETWAPNLNVVSLAGNVEARQVRKLKRRMFHSVFFDRASAKKDRVKFHVL 394

Query: 872  LTTYEMILADSSHL-RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQN 930
            LT+YEM+  ++  L +G+ + VLVVDEGHRLKN  SKLF LL  F  +H+VLLTGTPLQN
Sbjct: 395  LTSYEMLALEAGQLSKGLQYGVLVVDEGHRLKNKDSKLFQLLTQFDVRHKVLLTGTPLQN 454

Query: 931  NIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
            ++GE++ LL+FL+P  FPS ++FE +F+ L+  + V +L  L+ PHMLRRLK D M+ +P
Sbjct: 455  HLGELFMLLHFLEPDKFPSRAAFESRFSSLSQNEDVTQLHALLQPHMLRRLKNDVMKQLP 514

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQIL-----RNIGKGVAQQSMLNIVMQLRKVCNH 1045
            PK E++V VELS  Q E YR++L ++  +L          G A  ++ N++M+LRK CNH
Sbjct: 515  PKMEQLVRVELSPQQREIYRSLLLQHSSVLVGHRAAVAAAGGATTALKNLMMELRKACNH 574

Query: 1046 PYLIPGTEPDSGSVEFLHEMR-------IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTK 1098
            P+L+       G+               +  S KL L+  M   L   GHR++IFSQ T+
Sbjct: 575  PFLVAHQAGRGGAGRGGRGRHPTDLDSLVTHSGKLQLVDKMAMRLRDAGHRLIIFSQFTR 634

Query: 1099 LLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDK-SRFVFLLSTRSCGLGINL 1157
             LD+LE++L +  G   Y R+DG+V+  +RQ  I RFNQ   S F FLLSTR+ GLGINL
Sbjct: 635  TLDLLEEWL-VGRG-LGYMRIDGTVAGSERQKRIDRFNQHPDSYFCFLLSTRAGGLGINL 692

Query: 1158 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD 1217
            ATADTVII+DSD+NPH D+QA  RAHR+GQ K +++YRLV R ++EER++Q+++KK+ML+
Sbjct: 693  ATADTVIIFDSDWNPHNDLQAQARAHRLGQDKPVMIYRLVTRQTIEERMMQVSRKKMMLE 752

Query: 1218 QLFVNKSGS-------QKEVEDILRWGTEELFND 1244
             L V K  S       Q E++DILR+G +ELF D
Sbjct: 753  HLVVRKMSSGGGGELKQSELDDILRYGAQELFAD 786



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 25/41 (60%), Gaps = 5/41 (12%)

Query: 87  LLCCDS-----CPRTYHLQCLDPPLKRIPNGKWQCPKCTQK 122
           LLCCD      C   YH+ CLDPPL R+P G W CP+C  K
Sbjct: 6   LLCCDGLQQLGCTAVYHMYCLDPPLTRLPAGDWYCPECAHK 46


>gi|326917666|ref|XP_003205117.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 7-like [Meleagris gallopavo]
          Length = 3011

 Score =  478 bits (1229), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 385/664 (57%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT-VINICDERWKQPQ----- 665
            F VK+   S +H  W    +L      ++K++ +KAK G    ++  D+    P      
Sbjct: 827  FYVKYKNFSYLHCQWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEID 886

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L     + ER 
Sbjct: 887  RILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMER- 945

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             +++  ++D                 +E   E K    L  +QLE +NWL   W+ ++N 
Sbjct: 946  -VERPPADD--------------WKKSESSREYKNNNKLREYQLEGVNWLLFNWYNTRNC 990

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 991  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1048

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1049 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1107

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P  FPS ++F ++F
Sbjct: 1108 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEF 1167

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1168 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1227

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1228 AFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMI 1287

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1288 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1345

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1346 RQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1405

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1406 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1465

Query: 1235 RWGT 1238
            R G 
Sbjct: 1466 RKGA 1469


>gi|307776522|pdb|3MWY|W Chain W, Crystal Structure Of The Chromodomain-atpase Portion Of The
            Yeast Chd1 Chromatin Remodeler
          Length = 800

 Score =  478 bits (1229), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 290/686 (42%), Positives = 402/686 (58%), Gaps = 72/686 (10%)

Query: 611  SYEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY-------------GTTVINI 656
            +YEFL+KW  +S++HN+W   ES  +V   ++L+NY  ++                 I I
Sbjct: 71   NYEFLIKWTDESHLHNTWETYESIGQVRGLKRLDNYCKQFIIEDQQVRLDPYVTAEDIEI 130

Query: 657  CD----------ERWKQPQRVI-SLRSS-KDGTRE--AFVKWTGLPYDECTWEK---LDE 699
             D          E +  P+R+I S R+S +DGT +    VKW  L YDE TWE    + +
Sbjct: 131  MDMERERRLDEFEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWENATDIVK 190

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGD--CQQSEIVALTEQPEELKGGALF 757
             A E+  H  +      R+  K       LP+   +   Q+     L+ QP  +KGG L 
Sbjct: 191  LAPEQVKHFQN------RENSKI------LPQYSSNYTSQRPRFEKLSVQPPFIKGGELR 238

Query: 758  PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTM 817
              QL  +NW+   W K  N ILADEMGLGKTV   AFIS L    +   P +++VPLSTM
Sbjct: 239  DFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTM 298

Query: 818  PNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEM 877
            P WL  F  WAP+LN + Y G  K+R  IR+YE++ ++P    KKT   KFNVLLTTYE 
Sbjct: 299  PAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFY-TNPRAKGKKT--MKFNVLLTTYEY 355

Query: 878  ILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYN 937
            IL D + L  + W+ + VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  
Sbjct: 356  ILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAA 415

Query: 938  LLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            L+NFL P  F      + +  D    + + +L + + P +LRRLKKD  +++P KTER++
Sbjct: 416  LVNFLMPGRFTIDQEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERIL 475

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP--- 1054
             VELS +Q EYY+ +LTKNY  L    KG    S+LNI+ +L+K  NHPYL    E    
Sbjct: 476  RVELSDVQTEYYKNILTKNYSALTAGAKG-GHFSLLNIMNELKKASNHPYLFDNAEERVL 534

Query: 1055 ---DSGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
                 G +   + +R  I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I
Sbjct: 535  QKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSI 594

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDS 1168
            +     ++R+DG+V    R+ +I  FN  D + FVFLLSTR+ GLGINL TADTV+I+DS
Sbjct: 595  K--GINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDS 652

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------- 1221
            D+NP AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   +       
Sbjct: 653  DWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDG 712

Query: 1222 NKSGSQK-----EVEDILRWGTEELF 1242
            NK   +      E+  IL++G   +F
Sbjct: 713  NKYTKKNEPNAGELSAILKFGAGNMF 738


>gi|117606190|ref|NP_001071054.1| chromodomain-helicase-DNA-binding protein 7 [Gallus gallus]
 gi|123883232|sp|Q06A37.1|CHD7_CHICK RecName: Full=Chromodomain-helicase-DNA-binding protein 7;
            Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7
 gi|115394059|gb|ABI96999.1| chromodomain helicase DNA-binding protein 7 [Gallus gallus]
          Length = 3011

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 385/664 (57%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT-VINICDERWKQPQ----- 665
            F VK+   S +H  W    +L      ++K++ +KAK G    ++  D+    P      
Sbjct: 827  FYVKYKNFSYLHCQWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEID 886

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L     + ER 
Sbjct: 887  RILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMER- 945

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             +++  ++D                 +E   E K    L  +QLE +NWL   W+ ++N 
Sbjct: 946  -VERPPADD--------------WKKSESSREYKNNNKLREYQLEGVNWLLFNWYNTRNC 990

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 991  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1048

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1049 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1107

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P  FPS ++F ++F
Sbjct: 1108 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEF 1167

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1168 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1227

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1228 AFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMI 1287

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1288 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1345

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1346 RQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1405

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1406 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1465

Query: 1235 RWGT 1238
            R G 
Sbjct: 1466 RKGA 1469


>gi|395502487|ref|XP_003755611.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Sarcophilus
            harrisii]
          Length = 1823

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 305/773 (39%), Positives = 430/773 (55%), Gaps = 93/773 (12%)

Query: 563  GLTVSEIHITCESTDK--DVDVGKK--TSGSVAKRVQEPAVTESAQVKGKAVSYE--FLV 616
            G  V E H   E+ +K  D  +GKK  T  S      E     SA    +    E  +L+
Sbjct: 245  GEGVEEQHDNSETIEKVMDARLGKKGATGASTTVYATEANGNPSADFDPEKDEGEVQYLI 304

Query: 617  KWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTTVINI 656
            KW G S IH++W  E  L   KV   +KLEN+K K                 Y      +
Sbjct: 305  KWKGWSYIHSTWESEESLQQQKVKGMKKLENFKKKEDEIKQWLGKVSPEDVEYFNCQQEL 364

Query: 657  CDERWKQPQ---RVISLRSSKDGT----------------REAFVKWTGLPYDECTWEKL 697
              E  KQ Q   RVI++++SK  +                 E   KW GLPY EC+WE  
Sbjct: 365  ASELNKQYQIVERVIAVKTSKSASGHTEFPAHSRKSSSNEPEYLCKWMGLPYAECSWE-- 422

Query: 698  DEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-- 754
            DE  + +K+    D F    R   K   + D     K   Q+   VAL +QP  + G   
Sbjct: 423  DEALIGKKFQSCIDSF--HNRNNSKTIPTRD----CKVLKQRPRFVALKKQPAYIGGENL 476

Query: 755  ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPL 814
             L  +QLE LNWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P LV+VPL
Sbjct: 477  ELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPL 536

Query: 815  STMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTT 874
            ST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN L+TT
Sbjct: 537  STLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFNALITT 589

Query: 875  YEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGE 934
            YE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E
Sbjct: 590  YEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKE 649

Query: 935  MYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTE 994
            +++LL+F+ P  F     FE+           + L K++ P +LRR+KKD  +++P K E
Sbjct: 650  LWSLLHFIMPEKFEFWEDFEDDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVE 708

Query: 995  RMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGT 1052
            +++ VE+S +Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI  P  
Sbjct: 709  QILRVEMSVLQKQYYKWILTRNYKALSKGTRG-STSGFLNIVMELKKCCNHCYLIKPPEE 767

Query: 1053 EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFG 1112
                   E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL I+  
Sbjct: 768  NERENGQEILLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHY 826

Query: 1113 PKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFN 1171
            P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+DSD+N
Sbjct: 827  P--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 884

Query: 1172 PHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---------- 1221
            P  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +          
Sbjct: 885  PQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTV 944

Query: 1222 --NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
              N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 945  LDNNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 994


>gi|367008358|ref|XP_003678679.1| hypothetical protein TDEL_0A01360 [Torulaspora delbrueckii]
 gi|359746336|emb|CCE89468.1| hypothetical protein TDEL_0A01360 [Torulaspora delbrueckii]
          Length = 1450

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 299/760 (39%), Positives = 424/760 (55%), Gaps = 75/760 (9%)

Query: 538  STEDLGERNDKMVVEDADVSLRDNEGLTVSEIHITCESTDKDVDVGKKTSGSVAKRVQEP 597
            S +DL E  D+  VE  + S+ D EG             D  +D     +  + +   E 
Sbjct: 137  SDDDLLESQDEEGVEGMNSSIEDGEGYEYEYSATPQPEVDHGIDF--VVTHKLKEGADEA 194

Query: 598  AVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIP-ESQLKVLAKRKLENYKAKYGTTVINI 656
             +     +    V+++FL+KW  +S++HN+W   ES  +V   ++L+NY  ++    + I
Sbjct: 195  VLKTVPSLSDCKVNFQFLIKWSDESHLHNTWESYESLGQVRGIKRLDNYCKQFIIEDLQI 254

Query: 657  -----------------------CDERWKQPQRVI--SLR-SSKDGTRE--AFVKWTGLP 688
                                   C       QR I  S+R + +DGT +    VKW  L 
Sbjct: 255  RLDPYVTAEVFRSYGYGPREEARCSLNNLNNQRRIIDSVRVTQEDGTSQLQYLVKWRRLN 314

Query: 689  YDECTWEK---LDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGD--CQQSEIVA 743
            YDE TWEK   + E A E+  H             +  A+   LP+   +   Q+     
Sbjct: 315  YDEATWEKATEIAELAPEQVKHF------------QGRANSKILPQYSSNYTSQRPRFEK 362

Query: 744  LTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFK 803
            L+ QP  +KGG L   QL  +NW+   W K+ N ILADEMGLGKTV   AFIS L    +
Sbjct: 363  LSTQPPFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLVFARR 422

Query: 804  AKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKT 863
               P L++VPLSTMP W   F  WAP+L+ + Y G  K+R  IR +E++ ++P +  KK 
Sbjct: 423  QNGPHLIVVPLSTMPAWQETFERWAPDLDCICYMGNQKSRETIRDFEFY-TNPQSKGKK- 480

Query: 864  SSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLL 923
             + KFNVL+TTYE IL D S L  + W+ L VDE HRLKN+ S L+  LNS    +R+L+
Sbjct: 481  -NIKFNVLMTTYEYILKDRSELGSIKWQFLAVDEAHRLKNAESSLYESLNSLKVSNRMLI 539

Query: 924  TGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKK 983
            TGTPLQNNI E+  L++FL P  F      + +  D    + + +L + + P +LRRLKK
Sbjct: 540  TGTPLQNNIKELAALIDFLMPGRFTIDQEIDFENQDNAQEEYIRDLHERLQPFILRRLKK 599

Query: 984  DAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVC 1043
            D  +++P KTER++ VELS +Q EYY+ +LTKNY  L    KG    S+LN++ +L+K  
Sbjct: 600  DVEKSLPGKTERILRVELSDVQTEYYKNILTKNYSALSAGAKG-GHFSLLNVMSELKKAS 658

Query: 1044 NHPYLIPGTEP------DSGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQ 1095
            NHPYL    E         GS    + +R  I +S K+ LL  +L  L K+GHRVLIFSQ
Sbjct: 659  NHPYLFDNAEERVLEKFGDGSRSRGNILRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQ 718

Query: 1096 MTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLG 1154
            M ++LDIL DYL I+     ++R+DG+V    R+ +I  FN  D + FVFLLSTR+ GLG
Sbjct: 719  MVRILDILGDYLQIK--GINFQRLDGTVPSAQRRISIEHFNAPDSNDFVFLLSTRAGGLG 776

Query: 1155 INLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKL 1214
            INL TADTVII+DSD+NP AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK+
Sbjct: 777  INLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKM 836

Query: 1215 MLDQLFVN------KSGSQK------EVEDILRWGTEELF 1242
            +L+   ++      K  S+K      E+ +IL++G   +F
Sbjct: 837  ILEYAIISLGVTDGKKYSKKNEPSSGELSEILKFGAGNMF 876


>gi|426359736|ref|XP_004047121.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 2
            [Gorilla gorilla gorilla]
          Length = 2989

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 278/665 (41%), Positives = 387/665 (58%), Gaps = 60/665 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QP 664
            EF VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     + 
Sbjct: 825  EFYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEV 884

Query: 665  QRVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFER 717
             R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L         
Sbjct: 885  DRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL--------- 935

Query: 718  QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKN 776
              + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N
Sbjct: 936  --MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRN 988

Query: 777  VILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
             ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV Y
Sbjct: 989  CILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVY 1046

Query: 837  HGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVD 896
            HG   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+D
Sbjct: 1047 HGSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVID 1105

Query: 897  EGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEK 956
            E HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++
Sbjct: 1106 EAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQE 1165

Query: 957  FNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKN 1016
            F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN
Sbjct: 1166 FGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKN 1225

Query: 1017 YQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMR 1066
            +  L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  
Sbjct: 1226 FTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAM 1285

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVG 1126
            I+A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V   
Sbjct: 1286 IQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGN 1343

Query: 1127 DRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1185
             RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRI
Sbjct: 1344 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 1403

Query: 1186 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDI 1233
            GQSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+
Sbjct: 1404 GQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463

Query: 1234 LRWGT 1238
            LR G 
Sbjct: 1464 LRKGA 1468


>gi|406607606|emb|CCH41077.1| Chromodomain-helicase-DNA-binding protein [Wickerhamomyces ciferrii]
          Length = 1487

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 292/733 (39%), Positives = 406/733 (55%), Gaps = 100/733 (13%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQL-KVLAKRKLENYKAKY----------------GTTVI 654
            Y+FL+KW   S+IHN+W   S L  +   +K++NY  ++                    +
Sbjct: 187  YKFLIKWTETSHIHNTWEQYSNLIGMKGIKKVDNYIKQFIILDYQIRHDALTTREDIEAM 246

Query: 655  NICDER-------WKQPQRVI-SLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALE 703
            +I  +R       +K  +RVI S RS  D   E    FVKW  L YDE TWE        
Sbjct: 247  DIEKDRRLDEIAEYKNVERVIDSERSENDEGEEVLKYFVKWRRLNYDEATWE-------- 298

Query: 704  KYSHLTDLFVQF---ERQTLKKDASEDELPR--GKGDCQQSEIVALTEQPEELKGGALFP 758
                L D  VQ    E +  ++  +   LP        Q+     L  QP+ +K G L  
Sbjct: 299  ----LADTIVQIGPNEVKQFQQRLNSKILPSLSSSYGSQRPRFEKLVVQPKFIKNGELRD 354

Query: 759  HQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
             QL  LNW+   W +++N ILADEMGLGKTV   +F+S L    +   P +V+VPLST+P
Sbjct: 355  FQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIYARRQNGPHIVVVPLSTIP 414

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
             W   F  W+P+LN V Y G  +AR  IR YE++       NKK    KFNVLLTTYE I
Sbjct: 415  AWQETFEKWSPDLNCVYYLGNTEARKTIRDYEFYN------NKKI---KFNVLLTTYEYI 465

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            L D+S L  + W+ L VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  L
Sbjct: 466  LKDASELGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVSNRLLITGTPLQNNIKELAAL 525

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            +NFL P  F      + + ++      + +L+  V P +LRRLKKD  +++P KTER++ 
Sbjct: 526  VNFLMPGKFEIDEEIDFEHSNDDQENYIRDLQNKVKPFILRRLKKDVEKSLPSKTERILR 585

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--- 1055
            VELS +Q +YY+ +LTKNY  L    KG A  S+LN++ +L+K  NHPYL    E     
Sbjct: 586  VELSDLQTQYYKNILTKNYAALNQGSKG-AHVSLLNVMSELKKASNHPYLFDAAEDQVLA 644

Query: 1056 --SGSVEFLHEMR------IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
                S+  +H         I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL
Sbjct: 645  KFGSSLNGVHSREDILRGMIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRILDILGDYL 704

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIY 1166
            +I+     ++R+DG+V    R+ +I  FN+ D + FVFLLSTR+ GLGINL TADTVII+
Sbjct: 705  SIK--GINFQRLDGTVPSAQRRISIDHFNEPDSTDFVFLLSTRAGGLGINLMTADTVIIF 762

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP AD+QAM RAHRIGQ   ++VYR V + +VEE +L+ A+KK++L+   +     
Sbjct: 763  DSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVT 822

Query: 1222 NKSGSQK-------EVEDILRWGTEELFNDSPG-------------------INGKDMGE 1255
            + +G  K       E+ +IL++G   +F  S                     +   +MGE
Sbjct: 823  DGTGKSKKNEPSTGELSEILKFGAGNMFKASDNQKKLEDLNLDDVLNHAEDHVTTPEMGE 882

Query: 1256 NNTSIEEAVRDLE 1268
            +N   EE ++  E
Sbjct: 883  SNLGGEEFLKQFE 895


>gi|449279473|gb|EMC87054.1| Chromodomain-helicase-DNA-binding protein 7 [Columba livia]
          Length = 3023

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/663 (41%), Positives = 386/663 (58%), Gaps = 58/663 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT-VINICDERWKQPQ----- 665
            F VK+   S +H  W    +L      ++K++ +KAK G    ++  D+    P      
Sbjct: 828  FYVKYKNFSYLHCQWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEVD 887

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L     + ER 
Sbjct: 888  RILDFSRSTDDNGEPVMHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMER- 946

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             +++  ++D         ++SE        E      L  +QLE +NWL   W+ ++N I
Sbjct: 947  -VERPPADD--------WKKSESSR-----EYKNNNKLREYQLEGVNWLLFNWYNTRNCI 992

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YHG
Sbjct: 993  LADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHG 1050

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE 
Sbjct: 1051 SQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEA 1109

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P  FPS ++F ++F 
Sbjct: 1110 HRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEFG 1169

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 1170 DLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFT 1229

Query: 1019 ILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIK 1068
             L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I+
Sbjct: 1230 FLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQ 1289

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    R
Sbjct: 1290 AAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNLR 1347

Query: 1129 QAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            QAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ
Sbjct: 1348 QAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ 1407

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDILR 1235
            SK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+LR
Sbjct: 1408 SKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLR 1467

Query: 1236 WGT 1238
             G 
Sbjct: 1468 KGA 1470


>gi|440637835|gb|ELR07754.1| hypothetical protein GMDG_00377 [Geomyces destructans 20631-21]
          Length = 1536

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 280/657 (42%), Positives = 384/657 (58%), Gaps = 60/657 (9%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQL-KVLAKRKLENYKAK------YGTTVINIC---DERW 661
            +E+ VKW GKS  H +W     L  V   R+LENY  K      Y  T  ++     E+W
Sbjct: 301  FEYYVKWQGKSYYHATWEDAVYLGTVRGHRRLENYYRKVVLQDVYFATDPDVQPEEKEKW 360

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK---LDEPALEK 704
                           + +RVI +R   DG  E +VKW  L YD CTWE    + E A +K
Sbjct: 361  MLDRERDADALLDYTKVERVIGVRDGDDGA-EYYVKWKSLYYDSCTWESETLIGEIAQDK 419

Query: 705  YSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEAL 764
                 D ++    Q L  D SE        + ++S  V + EQP  +KGG L   Q+  L
Sbjct: 420  ----IDGYLNRTSQILTSDKSE-----SNSNTRRSH-VPIREQPSYIKGGQLRDFQITGL 469

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            N+L   W K+KNVILADEMGLGKTV   +F+S L  +     P LV+VPLSTMP W   F
Sbjct: 470  NFLAYNWSKNKNVILADEMGLGKTVQTVSFMSWLRHDRNQNGPFLVIVPLSTMPAWGDTF 529

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WAP+ N V Y+G   +R+IIR  E  +             KFNVLLT+YE ILAD++ 
Sbjct: 530  DFWAPDTNYVVYNGKESSRSIIRDCELLS------GGDVRKPKFNVLLTSYEYILADANF 583

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L  + W+ + VDE HRLKN  S+L+  L  F    R+L+TGTP+QN +GE+  L++FL P
Sbjct: 584  LGQIKWQFMAVDEAHRLKNRESQLYQRLLDFKTPSRLLITGTPVQNTLGELSALMDFLMP 643

Query: 945  ASFPSLSSFEEKFNDLTTT---QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
                     E+   DLT+    +K+  L   + P++LRR K+    ++PPKTE+++ VEL
Sbjct: 644  GEV----DIEDDM-DLTSEAAGEKIAALTTKIQPYILRRTKQKVENDLPPKTEKIIRVEL 698

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE----PDSG 1057
            S +Q EYY+ +LT+NY  L    KG  +QS+LNI+M+L+K  NHPY+ P  E        
Sbjct: 699  SDVQLEYYKNILTRNYAALNEGSKG-QKQSLLNIMMELKKASNHPYMFPNAEDKILKGGD 757

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
              E + +  I +S K+ LL  +L  L K+ HRVLIFSQM K+LDIL DYL +      ++
Sbjct: 758  RREDMLKGLIASSGKMMLLDRLLTKLKKDNHRVLIFSQMVKMLDILGDYLQLR--GHAFQ 815

Query: 1118 RVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG+++ G R+ AI  FN D S+ F FLLSTR+ GLGINL TADTVII+DSD+NP AD+
Sbjct: 816  RLDGTMASGPRRLAIDHFNADDSQDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADL 875

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            QAM RAHRIGQ + + VYRL+ + +VEE IL+ A+ KLML+ + + +  + KE+  +
Sbjct: 876  QAMARAHRIGQKRPVSVYRLLSKETVEEEILERARNKLMLEFITIQRGVTDKEMNQL 932


>gi|449480963|ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 2-like [Cucumis sativus]
          Length = 1761

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 286/689 (41%), Positives = 410/689 (59%), Gaps = 80/689 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK-RKLENYKAK------YGTTV----INICD--- 658
            EFL+KW G+S++H  W P S+L+ L+  +K+ NY  K      Y  +V    I + D   
Sbjct: 467  EFLIKWKGQSHLHCQWKPFSELQYLSGFKKVLNYTKKVMDEIRYRKSVSREEIEVYDVSK 526

Query: 659  -------ERWKQPQRVISLRSSKDGTR----EAFVKWTGLPYDECTWEK-----LDEPAL 702
                   ++  Q +RVI+ R SKDG+     E  VKW GL Y E TWEK       + A+
Sbjct: 527  EMDLDLIKQNSQVERVIADRISKDGSGDVVPEYLVKWQGLSYAEATWEKDVDISFAQDAI 586

Query: 703  EKY-SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQL 761
            ++Y +    + VQ +   L++  S+  L +            L EQPE L GG L  +QL
Sbjct: 587  DEYKAREAAISVQGKSVDLQRKKSKVSLRK------------LDEQPEWLMGGKLRDYQL 634

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
            E LN+L   W    NVILADEMGLGKTV + + +  L    +   P LV+VPLST+ NW 
Sbjct: 635  EGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIYGPFLVVVPLSTLSNWA 694

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSS-YKFNVLLTTYEMILA 880
             EF  W P++NV+ Y G   +R + +Q+E+        NK+T    KFN LLTTYE++L 
Sbjct: 695  KEFRKWLPDMNVIVYVGTRASREVCQQHEF-------XNKRTGRPIKFNALLTTYEVVLK 747

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D + L  + W  L+VDE HRLKNS ++L++ L+ FS ++++L+TGTPLQN++ E++ LL+
Sbjct: 748  DRAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLH 807

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            FL P  F S   F   + +L++  ++E   L   + PH+LRR+ KD  +++PPK ER++ 
Sbjct: 808  FLDPDKFKSKDDFIHNYKNLSSFDEIELANLHMELKPHILRRVIKDVEKSLPPKIERILR 867

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP------GT 1052
            VE+S +Q +YY+ +L +N+  L N G    Q S+LNIV++L+K CNHP+L        G 
Sbjct: 868  VEMSPLQKQYYKWILERNFHDL-NKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGG 926

Query: 1053 EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFG 1112
            + DS     L +  I +S KL +L  +L  L++  HRVLIFSQM ++LDIL DY++  + 
Sbjct: 927  DFDSNDSSKL-DRTIWSSGKLVILDKLLMRLHETKHRVLIFSQMVRMLDILADYMS--YR 983

Query: 1113 PKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFN 1171
               ++R+DGS     RQ A+  FN   S  F FLLSTR+ GLGINLATADTVII+DSD+N
Sbjct: 984  GFQFQRLDGSTKAEFRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWN 1043

Query: 1172 PHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVE 1231
            P  D+QAM+RAHRIGQ + + +YR V  +SVEE IL+ AKKK++LD L + K  ++  +E
Sbjct: 1044 PQNDLQAMSRAHRIGQQEVVNIYRFVTSSSVEEDILERAKKKMVLDHLVIQKLNAEGRLE 1103

Query: 1232 D----------------ILRWGTEELFND 1244
                             ILR+G EELF +
Sbjct: 1104 KKEAKKGIGFDKNELSAILRFGAEELFKE 1132


>gi|7243213|dbj|BAA92654.1| KIAA1416 protein [Homo sapiens]
          Length = 1967

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 387/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W  I + +     ++K++ +KAK G    +  I DE +     +  
Sbjct: 64   FYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 123

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 124  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL---------- 173

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 174  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 227

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 228  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 285

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 286  GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 344

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 345  AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 404

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 405  GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 464

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 465  TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 524

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 525  QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 582

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 583  RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 642

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 643  QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 702

Query: 1235 RWGT 1238
            R G 
Sbjct: 703  RKGA 706


>gi|363737795|ref|XP_413879.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 2 [Gallus gallus]
          Length = 1837

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 288/716 (40%), Positives = 412/716 (57%), Gaps = 87/716 (12%)

Query: 614  FLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTTV 653
            +L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y    
Sbjct: 311  YLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWLAKVSPEDVEYFNCQ 370

Query: 654  INICDERWKQPQ---RVISLRSSKDGTREA----------------FVKWTGLPYDECTW 694
              +  E  KQ Q   RVI++++SK     A                  KW GLPY EC+W
Sbjct: 371  QELASELNKQYQIVERVIAVKTSKSAAGHADFPANSRKTSSNDPEYLCKWMGLPYAECSW 430

Query: 695  EKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL-- 751
            E  DE  + +K+ H  D F    R   K   + D     K   Q+   VAL +QP  +  
Sbjct: 431  E--DEALISKKFQHCIDSFNN--RNNSKTIPTRD----CKVLKQRPRFVALKKQPSYIGS 482

Query: 752  KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVL 811
            +   L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P LV+
Sbjct: 483  ENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVV 542

Query: 812  VPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVL 871
            VPLST+ +W  EF +WAP +NVV Y G   +R +IR+YEW       ++ ++   KFN L
Sbjct: 543  VPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEW-------IHSQSKRLKFNAL 595

Query: 872  LTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNN 931
            +TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQN+
Sbjct: 596  ITTYEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNS 655

Query: 932  IGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPP 991
            + E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++P 
Sbjct: 656  LKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSLPA 714

Query: 992  KTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI-- 1049
            K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI  
Sbjct: 715  KVEQILRVEMSALQKQYYKWILTRNYKALSKGTRG-STSGFLNIVMELKKCCNHCYLIKP 773

Query: 1050 PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
            P        +E L  + I++S KL LL  +L  L   G+RVLIFSQM ++LDIL +YL I
Sbjct: 774  PEENERENGIETLQSL-IRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLTI 832

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDS 1168
            +  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+DS
Sbjct: 833  KHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDS 890

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------- 1221
            D+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +       
Sbjct: 891  DWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTG 950

Query: 1222 -----NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                 N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 951  RTVLDNNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 1003


>gi|312385188|gb|EFR29745.1| hypothetical protein AND_01060 [Anopheles darlingi]
          Length = 5373

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 269/665 (40%), Positives = 379/665 (56%), Gaps = 59/665 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENY--KAKYGTTVINICDERWKQPQ-- 665
            E+ VK+   S +H  W  E +L    KR   K++ +  K +    +    DE    P   
Sbjct: 1120 EYFVKYRNFSYLHCEWRTEDELLKGDKRVGNKIKRFLMKQQQQLNIFESLDEESFNPDFV 1179

Query: 666  ---RVISLRSSKD----GTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
               RV+ +    D      +   VKW  LPY++ TWE    +D+P +++Y     +  + 
Sbjct: 1180 EVDRVLDVSELVDDEGKSVKHYLVKWKSLPYEDSTWELEDDVDQPKIDQYYKFNKIPPKS 1239

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSK 775
            E +T K+                 +  ALTE P    G  L P+QLE LNWLR  W+K  
Sbjct: 1240 EWKTKKR-------------PHPDQWKALTESPIFKGGNKLRPYQLEGLNWLRYSWYKGN 1286

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ +  F++S+Y E+  + P LV+ PLST+PNW  EF  W   +NV+ 
Sbjct: 1287 NCILADEMGLGKTIQSLTFVNSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWT-EMNVIV 1344

Query: 836  YHGCAKARAIIRQYE-WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
            YHG A +R +I+ YE ++ ++   L +  +  KFNVL+TT+EMI+ D   L+   W   V
Sbjct: 1345 YHGSATSRQMIQDYEVYYRTETGKLIRDIT--KFNVLITTFEMIVTDYQDLKNFTWRACV 1402

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            +DE HRLKN   KL   L   + +HRVLL+GTPLQNN+ E+++LLNFL+P+ F     F 
Sbjct: 1403 IDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPSQFSCSEDFL 1462

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
             +F  L T  +V +L+ L+ P MLRRLK D  +++ PK E +V VEL++IQ +YYR +L 
Sbjct: 1463 REFGSLKTESEVLKLQALLKPMMLRRLKDDVEKSLAPKEETIVEVELTNIQKKYYRGILE 1522

Query: 1015 KNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---------SGSVEFLHEM 1065
            +N+  L          +++N +M+LRK C HPYL+ G E               E  ++ 
Sbjct: 1523 QNFSFLMKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDYRQQHGEDAEAYYKN 1582

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             I +S K+ L+  +L  L   GHRVLIFSQM + LDILEDYL  +  P  +ER+DG +  
Sbjct: 1583 LIVSSGKMVLIDKLLPKLRANGHRVLIFSQMVRCLDILEDYLMYKKYP--FERIDGRIRG 1640

Query: 1126 GDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQAAI R+++ D  RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  R HR
Sbjct: 1641 NLRQAAIDRYSKPDSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHR 1700

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQ-----KEVED 1232
            IGQ K + +YRL+ R + E  +   A  KL LD+  +       NK G+Q     KE+ED
Sbjct: 1701 IGQQKMVKIYRLLCRNTYEREMFDKASLKLGLDKAVLQSMNTGQNKDGTQRQLSKKEIED 1760

Query: 1233 ILRWG 1237
            +L+ G
Sbjct: 1761 LLKKG 1765


>gi|366987099|ref|XP_003673316.1| hypothetical protein NCAS_0A03690 [Naumovozyma castellii CBS 4309]
 gi|342299179|emb|CCC66927.1| hypothetical protein NCAS_0A03690 [Naumovozyma castellii CBS 4309]
          Length = 1457

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 312/826 (37%), Positives = 462/826 (55%), Gaps = 90/826 (10%)

Query: 613  EFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY----------------GTTVIN 655
            +FL+KW  +S++HN+W   ES  ++   ++L+NY  ++                   V++
Sbjct: 217  QFLIKWTDQSHLHNTWETYESLGQIKGLKRLDNYCKQFIIQDQQVRLDPYITPEDLEVMD 276

Query: 656  ICDER-------WKQPQRVISLR--SSKDGTRE--AFVKWTGLPYDECTWEK---LDEPA 701
            +  ER       +  P+R++  +  +  DGT E    VKW  L YDE TWE    + + A
Sbjct: 277  MEQERRLDEFQEFTIPERIVDSQRVTLDDGTSELQYLVKWKRLNYDEATWEAAADIVKDA 336

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQL 761
             E+  H  +   +   + L ++++         +  + +   L EQP  +K G L   QL
Sbjct: 337  PEQVKHFQN---RINSKILPQNST------NYNNSARPKFEKLVEQPSYVKFGELRDFQL 387

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
              +NW+   W K+ N ILADEMGLGKTV   AFIS L    +   P +V+VPLSTMP W 
Sbjct: 388  TGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIYARRQNGPHIVVVPLSTMPAWQ 447

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
              F  WAP+LNV+ Y G  ++R  IR++E++ ++P    KK  + KFNVLLTTYE IL D
Sbjct: 448  ETFDKWAPDLNVICYMGNQRSRDAIREFEFY-TNPYAKGKK--NIKFNVLLTTYEYILKD 504

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
             S L  + W+ L VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  L+NF
Sbjct: 505  RSELGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVNNRLLITGTPLQNNIKELAALINF 564

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L P  F      + +  D    + + +L K + P +LRRLKKD  +++P KTER++ VEL
Sbjct: 565  LMPGRFTIDQEIDFENQDEEQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVEL 624

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP------D 1055
            S +Q EYY+ +LTKNY  L    KG    S+LNI+ +L+K  NHPYL    E        
Sbjct: 625  SDVQTEYYKNILTKNYSALTAGSKG-GHFSLLNIMSELKKASNHPYLFDNAEERVLKKFG 683

Query: 1056 SGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
             G +   + +R  I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I+   
Sbjct: 684  DGQMSRENVLRGLIMSSGKMVLLDQLLNKLKKDGHRVLIFSQMVRMLDILGDYLSIK--G 741

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
             T++R+DG+V    R+ +I  FN  D +  VFLLSTR+ GLGINL TADTVII+DSD+NP
Sbjct: 742  ITFQRLDGTVPSAQRRISIDHFNAPDSTDDVFLLSTRAGGLGINLMTADTVIIFDSDWNP 801

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN---KSGSQK- 1228
             AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   ++     GS+  
Sbjct: 802  QADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGSKYT 861

Query: 1229 --------EVEDILRWGTEELF---NDSPGINGKDMGENNTSIEEAVR--DLEQKHRKRG 1275
                    E+ +IL++G   +F   ++   +   ++ +     E+ V   DL + H    
Sbjct: 862  KKNEPNPGELSEILKFGAGNMFAAKDNQKKLEDLNLDDVLNHAEDHVTTPDLGESHL--- 918

Query: 1276 GGLGDVYQDKCTEGSTKIVWD----ENAIARLLDRSNLQSGSTDLAEG-DLEN---DMLG 1327
            GG   + Q + T+    + WD    E  + +L D    +     + E  D+ N   + L 
Sbjct: 919  GGEEFLKQFEVTDYKADVDWDDIIPEEELKKLKDEEQKRKDDEYIKEQLDMMNRRDNALK 978

Query: 1328 SVKATEWNEETTEDQAESPVAAVDDASAENSERKEENAVTGIEENE 1373
             +K +   + TT D       + D++S+  S+R+  N +T I E+E
Sbjct: 979  KIKHSVNGDGTTVD-------SDDESSSRTSKRRARNDLTSIGESE 1017


>gi|281344850|gb|EFB20434.1| hypothetical protein PANDA_017908 [Ailuropoda melanoleuca]
          Length = 1133

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 289/718 (40%), Positives = 411/718 (57%), Gaps = 88/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 286  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 345

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 346  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 405

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+    D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 406  SWE--DEALIGKKFQSCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 457

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 458  GGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 517

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 518  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 570

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 571  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQ 630

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 631  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 689

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 690  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 748

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 749  KPPEENERENGQEVLLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 807

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 808  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 865

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 866  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 925

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 926  TGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 980


>gi|384250118|gb|EIE23598.1| hypothetical protein COCSUDRAFT_47361 [Coccomyxa subellipsoidea
            C-169]
          Length = 1246

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 260/613 (42%), Positives = 378/613 (61%), Gaps = 53/613 (8%)

Query: 665  QRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA 724
            +RVI+ R+  DGT    VKW GLPY ECTWE   +    +  H  D + + E + L +  
Sbjct: 40   ERVIAQRTEPDGTPRYLVKWKGLPYGECTWENFQDIFKAEGQHCVDQYQEREAR-LIEGV 98

Query: 725  SEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
               E  R   + Q+    AL  QP+ L+ G L  +QLE LNWL   W ++ N ILADEMG
Sbjct: 99   RGLEAQRRASEGQR----ALLTQPDFLRAGQLRDYQLEGLNWLIYSWMQNNNCILADEMG 154

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKT+   +FI  L    +   P LV+VPLST+PNW+ EF  W P  N + Y G +K+R 
Sbjct: 155  LGKTIQCVSFIGYLSLWQQIAGPYLVVVPLSTVPNWIREFRKWLPQCNALVYVGDSKSRE 214

Query: 845  IIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNS 904
            +IR +E++        +    YKF+VL+TT+E++L D++ L  + W  LVVDE HRLKN+
Sbjct: 215  VIRAFEFYTG-----KRSGRMYKFDVLITTFELVLKDAAVLSEIKWSYLVVDEAHRLKNN 269

Query: 905  GSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQ 964
             S L+  L ++ F++++L+TGTPLQN++ E++ LL+FL+P+ FP+   F+ +     + +
Sbjct: 270  ESALYRELATWQFKNKLLVTGTPLQNSMKELWALLHFLEPSKFPNAEDFDARH----SLK 325

Query: 965  KVEELKKL---VAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILR 1021
            K EEL +L   + PH+LRR+ KD  +++PPK ER++ V +S +Q +YY+ +LT+N++ L 
Sbjct: 326  KAEELTQLHTELRPHLLRRVIKDVEKSLPPKNERILRVAMSPLQKQYYKWILTRNFKELN 385

Query: 1022 NIGKGVAQQSMLNIVMQLRKVCNHPYLIP-------GTEPDSGSVEFLHEMRIKASA-KL 1073
               KG  Q S+LNI+ +L+K CNHP+L         G+  DS +V+     R+  SA K+
Sbjct: 386  KGTKGGGQISLLNIITELKKCCNHPFLFESAESDFRGSNDDSKAVD-----RLTVSAGKM 440

Query: 1074 TLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAIT 1133
             LL  +++ L + GHRVLIFSQM ++LDI+ DY+ +      ++R+DGS     R  A+ 
Sbjct: 441  VLLDKLMRRLKETGHRVLIFSQMVRMLDIISDYMRLR--GFQHQRLDGSTPAAQRHQAME 498

Query: 1134 RFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLL 1192
             FN   S  F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QAM+RAHRIGQ++ + 
Sbjct: 499  HFNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTETVN 558

Query: 1193 VYRLVVRASVEERILQLAKKKLMLDQLFVNK---SG-----------------SQKEVED 1232
            +YR +   SVEE IL+ AK+K++LD L + +   SG                  + E+  
Sbjct: 559  IYRFLTSGSVEEDILERAKQKMVLDHLVIQRMDTSGRTVLDPRSAAASAKQMFGKDELTA 618

Query: 1233 ILRWGTEELFNDS 1245
            ILR+G EELF  S
Sbjct: 619  ILRFGAEELFKAS 631


>gi|354465712|ref|XP_003495321.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
            [Cricetulus griseus]
 gi|344238589|gb|EGV94692.1| Chromodomain-helicase-DNA-binding protein 2 [Cricetulus griseus]
          Length = 1827

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 289/718 (40%), Positives = 412/718 (57%), Gaps = 88/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW   S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 306  QYLIKWKSWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 365

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 366  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 425

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+ +  D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 426  SWE--DEALIGKKFQNCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 477

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 478  GGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 537

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 538  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 590

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 591  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSSHRLLITGTPLQ 650

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 651  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 709

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 710  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 768

Query: 1050 PGTEPD--SGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
               E +      E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 769  KAPEENERENGQEVLQSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 827

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 828  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 885

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 886  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 945

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   I G++       I+E +R
Sbjct: 946  TGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKE---IEGEESEPQEMDIDEILR 1000


>gi|449546909|gb|EMD37878.1| chromodomain-helicase DNA-binding protein [Ceriporiopsis
            subvermispora B]
          Length = 1434

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 275/693 (39%), Positives = 398/693 (57%), Gaps = 69/693 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKYGTT--VINICD------------ 658
            F +KW   S++HN+      LK     ++++NY   Y     ++N  D            
Sbjct: 212  FHIKWKNFSHLHNTDETYEFLKRFRGLKRVDNYIKAYRAYQDLLNAPDLSREDYETLLLE 271

Query: 659  --------ERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTD 710
                    E +K  +R+I+ R + +G  E F KW GL Y+ CTWE  DE        +T 
Sbjct: 272  KEREREELETFKTVERIIAQRENDEGKVEYFCKWNGLNYEHCTWELQDE--------ITS 323

Query: 711  LFVQFERQTLKKDASEDELPRGKG---DCQQSEIVALTEQPEELK--GGALFPHQLEALN 765
            +  + + Q  +   +E + P         ++     +TE PE L   GG L   QL  LN
Sbjct: 324  M-ARDQIQAYRAREAEAKFPYKSAVYPKDRRPTFTKITEDPEYLTATGGELKDFQLTGLN 382

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            WL   W K  N ILADEMGLGKTV   +F+S L+ E +   P LV+VPLST+  W ++FA
Sbjct: 383  WLAYLWSKGDNGILADEMGLGKTVQTVSFLSYLFHEKQQYGPFLVIVPLSTITAWQSQFA 442

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             W+P++NV+ Y G A AR +IR +E+  +     +KK    K NVLLTTYE++L DS  L
Sbjct: 443  TWSPDINVITYIGTATAREVIRTHEFGQT-----SKKYKMLKMNVLLTTYEIVLRDSKEL 497

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
              + W+VL VDE HRLKNS S+L+  L SFS   ++L+TGTPLQNN+ E+ +L++FL P 
Sbjct: 498  GDIKWQVLAVDEAHRLKNSESQLYEALRSFSAASKLLITGTPLQNNVKELLSLMHFLMPE 557

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
             F   + F+    D+   +K++EL K +   MLRRLKKD + ++P K ER++ VE+S +Q
Sbjct: 558  KFLLTNEFD--LTDVDHEEKIKELHKQLESLMLRRLKKDVLTSLPTKNERILRVEMSGLQ 615

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEM 1065
              +Y+ +LTKN+Q L     G    S+LNI M+L+K  NHPYL  G E  + + E   + 
Sbjct: 616  THFYKNILTKNFQGLVKSANGNNNISLLNIAMELKKAANHPYLFDGAETRTDNTEETLKG 675

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             + +S K+ LL  +L  L ++GHRVLIFSQM ++LDIL DY+++      ++R+DG VS 
Sbjct: 676  LVMSSGKMVLLDKLLARLRQDGHRVLIFSQMVRMLDILSDYMSLR--GYQHQRLDGMVSS 733

Query: 1126 GDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              R+ +I  FN   S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM RAHR
Sbjct: 734  EARKKSIAHFNAPGSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHR 793

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN-----------KSGSQK----- 1228
            IGQ   + VYR V + ++EE +L+ AKKK++L+   +N           K+G+ K     
Sbjct: 794  IGQKSHVSVYRFVSKDTMEEDVLERAKKKMVLEYAIINQMDTTQAHLSSKAGASKDAAKP 853

Query: 1229 ------EVEDILRWGTEELFNDSPGINGKDMGE 1255
                  E+  +L++G +++F+       K + E
Sbjct: 854  NDLSKDELHAVLKYGAQKIFDKDDSQQSKKLDE 886


>gi|198430685|ref|XP_002130660.1| PREDICTED: hypothetical protein [Ciona intestinalis]
          Length = 1867

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 307/824 (37%), Positives = 451/824 (54%), Gaps = 108/824 (13%)

Query: 524  PVAVNGKVQDES-AVSTEDLGERNDKMVVEDADVSLRDNEGLTVSEIHITCESTDKDVD- 581
            PV  + ++Q +S  VS  +    ND     D+D  +  N    V E   T E+ +K +D 
Sbjct: 254  PVRASSRIQRKSNTVSYRE----NDSTQETDSDDLVEINPNEEVEEDPDT-EAIEKIMDS 308

Query: 582  -------VGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQL 634
                    G KT+    KR  +P       VK      ++L+KW   S++HN+W  E  L
Sbjct: 309  RVGRLGATGAKTTAYAVKRSSDP--NHGFNVKTDEAETQYLIKWKNWSHLHNTWESEETL 366

Query: 635  K---VLAKRKLENYKAKYGTTVINI--------------CDE--------RWKQPQRVIS 669
            +   +   ++LEN+  K     IN+              C +         + + +RVI+
Sbjct: 367  RTQNIRGMKRLENFVRK--NEEINVWLNAALPEDKEYYYCQQAMNNNVLQNYLKVERVIA 424

Query: 670  LRSSKDGTREAF---VKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASE 726
             RS+K   +E +   VKW GLPY ECTWE+              L  +F+ +    +  +
Sbjct: 425  -RSAKKNQQETWDYQVKWCGLPYSECTWEE------------ESLIKEFQDEINAFEMRQ 471

Query: 727  DELPRGKGDC----QQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNVILAD 781
            D     K DC    Q+   V ++ QP+  +G   L  +QL+ +NWL   W K  +VILAD
Sbjct: 472  DNPCIPKRDCKVLRQRPRFVPMSRQPDWFQGKLQLRDYQLQGVNWLAHSWCKGNSVILAD 531

Query: 782  EMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAK 841
            EMGLGKT+ + +F+S LY   +     L++VPLSTM +W  EF  WAP +NV+ Y G   
Sbjct: 532  EMGLGKTIQSISFLSYLYHTHELYGLFLIIVPLSTMTSWQVEFQTWAPYMNVIVYMGDQS 591

Query: 842  ARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRL 901
            +RA IR+ EW   +          YKFN +LT+YE++L D S L    W V+ VDE HRL
Sbjct: 592  SRATIREVEWMFPN--------KHYKFNAVLTSYEILLKDKSFLGSHSWAVIAVDEAHRL 643

Query: 902  KNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE---KFN 958
            KN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+F+ P  F + S FEE   K  
Sbjct: 644  KNDDSLLYRSLKEFKSNHRLLITGTPLQNSLKELWALLHFIMPDKFETWSDFEEEHAKNR 703

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            D   T     L K++ P +LRR+KK+  +++P K E+++ V +SS+Q +YY+ +LTKNY 
Sbjct: 704  DSGYTS----LHKVLQPFLLRRVKKEVEKSLPSKVEQILRVPMSSLQKQYYKWLLTKNYA 759

Query: 1019 ILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHS 1078
             L   G+G +  S  NI+M+L+K CNH +L+   E ++ S E L ++ ++ S K+ LL  
Sbjct: 760  ALTKGGRG-SFTSFCNIIMELKKCCNHAFLVKAPETEATSSEMLLKVLLRNSGKMILLDK 818

Query: 1079 MLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQD 1138
            +L  L + GHRVLIFSQM ++LDI+++YL +      ++R+DGSVS   R+ A+  FN +
Sbjct: 819  LLIRLKENGHRVLIFSQMVRMLDIIQEYLVVRR--LQFQRLDGSVSSDLRRRALDHFNAE 876

Query: 1139 KSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLV 1197
             S  F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA  RAHRIGQ  ++ +YRLV
Sbjct: 877  GSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPMNDLQAQARAHRIGQKNQVNIYRLV 936

Query: 1198 VRASVEERILQLAKKKLMLDQLFV---------------------NKSGSQKEVEDILRW 1236
               SVEE I++ AKKK++LD L +                     N   ++ E+  IL++
Sbjct: 937  CAGSVEEDIIERAKKKMVLDHLVIQRMDTSGKTVLFKTSTPSSTTNNPFNKDELSAILKF 996

Query: 1237 GTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGD 1280
            G EELF ++      +  E    I+E +R  E +  +   G+GD
Sbjct: 997  GAEELFQEA----EGEEKEPECDIDEILRRAETRQDQPSMGVGD 1036


>gi|452989426|gb|EME89181.1| hypothetical protein MYCFIDRAFT_114041, partial [Pseudocercospora
            fijiensis CIRAD86]
          Length = 1451

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 269/654 (41%), Positives = 386/654 (59%), Gaps = 54/654 (8%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLKV-LAKRKLENYKAKYGTTVINICD---------ERW 661
            YEFL+KW  +++ H +W   + L      R+LENY  K       + +         ERW
Sbjct: 219  YEFLIKWQDQAHYHATWHKWADLTTSRGFRRLENYFRKIVKVDQQVANDPNVPPEDKERW 278

Query: 662  K--------------QPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                           + +R+I  R  ++GT E FVKW  L YD CTWEK  E   +    
Sbjct: 279  NLDREAYLDSLIDYNKVERIIGARDGEEGT-EYFVKWKALFYDSCTWEK-GELISQIAQG 336

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    +    D +E      +    +S+ V    QP  +KGG L   Q+  LN+L
Sbjct: 337  EIDRFLDRSSKLPVSDKTE------QNPHTRSKYVPFRTQPSYIKGGELREFQIHGLNFL 390

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W +  NVILADEMGLGKTV   +F++ L  + + + P +V+VPLSTMP W   F  W
Sbjct: 391  AHHWCRGNNVILADEMGLGKTVQTVSFMNWLRYDRRQQGPFIVVVPLSTMPAWADTFDNW 450

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P+LN V Y+G   AR +IR+YE      D   KK    KFNVLLTTYE ILAD++ L  
Sbjct: 451  TPDLNYVVYNGNEAARKVIREYELLV---DGNPKKV---KFNVLLTTYEYILADATFLSQ 504

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ + VDE HRLKN  S+L++ L  F    R+L+TGTP+QN + E+  L++FL P   
Sbjct: 505  IKWQFMAVDEAHRLKNRESQLYAKLMDFGAPSRLLITGTPMQNTLSELSALMDFLMPGKI 564

Query: 948  PSLSSFEEKFNDLTT---TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
                  EE   DLT+   ++K+ EL   ++P+M+RR K+    ++PPKTE+++ VEL+ +
Sbjct: 565  ----HVEENI-DLTSEHASKKLAELTDAISPYMIRRTKQKVENDLPPKTEKIIRVELADV 619

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFL 1062
            Q EYY+ +LT+NY  L N G    + S+LNI+M+L+K  NHP++ P  E    +GS    
Sbjct: 620  QLEYYKNILTRNYAAL-NAGNKAQKTSLLNIMMELKKASNHPFMFPNAEERILAGSEARE 678

Query: 1063 HEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             +++  I +S K+ L+  +L  + K+GHRVLIFSQM K+LDIL DYL +      ++R+D
Sbjct: 679  DQLKALITSSGKMMLIDQLLMKMRKDGHRVLIFSQMVKMLDILGDYLQLR--GYQFQRLD 736

Query: 1121 GSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++ G R+ AI  FN  D   F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QAM
Sbjct: 737  GTIAAGPRRMAIDHFNAPDSQDFCFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAM 796

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
             RAHRIGQ K + +YRLV + +VEE +L+ A+ KLML+ + + +  + K+  ++
Sbjct: 797  ARAHRIGQKKPVTIYRLVSKDTVEEEVLERARNKLMLEFITIQRGVTDKDAREL 850


>gi|126321078|ref|XP_001368272.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Monodelphis
            domestica]
          Length = 2999

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 386/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W  I + +     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L          
Sbjct: 886  RILDFARSTDDNGEPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKL---------- 935

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+ ++N 
Sbjct: 936  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNTRNC 989

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 990  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1047

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1048 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P  FPS ++F ++F
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSETTFMQEF 1166

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMI 1286

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1287 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1344

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1345 RQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1464

Query: 1235 RWGT 1238
            R G 
Sbjct: 1465 RKGA 1468


>gi|431891799|gb|ELK02333.1| Chromodomain-helicase-DNA-binding protein 7 [Pteropus alecto]
          Length = 2982

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 279/664 (42%), Positives = 385/664 (57%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ YKAK G    +  I DE +     +  
Sbjct: 820  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRYKAKQGQNKFLSEIEDELFNPDYVEVD 879

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L          
Sbjct: 880  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKL---------- 929

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             L ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 930  -LSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 983

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 984  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1041

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1042 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1100

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1101 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1160

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1161 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1220

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1221 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMI 1280

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1281 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1338

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1339 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1398

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1399 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDSAANGVQQLSKKEIEDLL 1458

Query: 1235 RWGT 1238
            R G 
Sbjct: 1459 RKGA 1462


>gi|403414793|emb|CCM01493.1| predicted protein [Fibroporia radiculosa]
          Length = 1441

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 281/691 (40%), Positives = 396/691 (57%), Gaps = 67/691 (9%)

Query: 614  FLVKWVGKSNIHNS-WIPESQLKVLAKRKLENYKAKYGTT---------------VINIC 657
            F +KW   S++HN+  + E   +    ++++NY   Y                  V+ + 
Sbjct: 221  FHIKWKNFSHLHNTDEVYEFLKRYKGLKRVDNYVKAYKAYNDRLASPELSREDKEVLLLD 280

Query: 658  DER-------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTD 710
             ER       +K   R+I+ R ++ G  E F KW GL Y+ CTWE  DE        L D
Sbjct: 281  REREKEELETFKTVDRIIAQRENEAGQVEYFCKWNGLNYEHCTWEVQDEIRPIAKEQL-D 339

Query: 711  LFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK--GGALFPHQLEALNWLR 768
            ++ Q E +      S +  PR     Q+     +TE PE L   GG L   QL  LNWL 
Sbjct: 340  VYRQREAEARFPFKSMN-YPR----HQRPTFKKITEDPEYLTATGGQLKDFQLTGLNWLA 394

Query: 769  KCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWA 828
              W K +N ILADEMGLGKTV   +F+S L+ E +   P LV+VPLST+  W ++FA WA
Sbjct: 395  YLWSKGENGILADEMGLGKTVQTVSFLSYLFHEMRQYGPFLVIVPLSTITAWQSQFATWA 454

Query: 829  PNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGV 888
            P+LNV+ Y G A AR +IR YE+  S     NKK    + NVLLTTYE+ L DS  L  +
Sbjct: 455  PDLNVITYIGTAAAREVIRGYEFGPS-----NKK---LRMNVLLTTYEITLRDSKELGDI 506

Query: 889  PWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 948
             W+VL VDE HRLKNS S+L+  L SFS   ++L+TGTPLQNN+ E+ +L++FL P  F 
Sbjct: 507  KWQVLSVDEAHRLKNSESQLYEALRSFSAASKLLITGTPLQNNVKELLSLMHFLMPEKFH 566

Query: 949  SLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEY 1008
              + F+    D+   +K++EL K +   MLRRLK+D +  +P K+ER++ VE+S +Q  +
Sbjct: 567  LSNEFD--LTDVDHEEKIKELHKQLESLMLRRLKRDVLTELPTKSERILRVEMSGLQTHF 624

Query: 1009 YRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIK 1068
            Y+ +LTKN+Q L     G    S+LNI M+L+K  NHPYL  G E  + + E   +  + 
Sbjct: 625  YKNILTKNFQGLVKSANGNNNISLLNIAMELKKAANHPYLFDGAETKTDNEEETLKGLVM 684

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            +S K+ LL  +L  L ++GHRVLIFSQM ++LDIL DY+ +      ++R+DG +S   R
Sbjct: 685  SSGKMVLLDKLLARLRQDGHRVLIFSQMVRMLDILTDYMVMR--GYQHQRLDGMISSELR 742

Query: 1129 QAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            + AI  FN   S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM RAHRIGQ
Sbjct: 743  KKAIAHFNSPGSTDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQ 802

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN-----------KSG----------- 1225
               + VYR V + ++EE +L+ AKKK++L+   +N           K G           
Sbjct: 803  KSHVSVYRFVSKDTMEEDVLERAKKKMVLEYAIINQMDTSQAHLSSKGGASTKDPSKPND 862

Query: 1226 -SQKEVEDILRWGTEELFNDSPGINGKDMGE 1255
             S+ E+  +L++G +++F+       K + E
Sbjct: 863  LSKDELHAVLKYGAQKIFDKDDSQQSKKLDE 893


>gi|194214886|ref|XP_001915803.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Equus
            caballus]
          Length = 2995

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 279/664 (42%), Positives = 387/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 825  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 884

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L     + ER 
Sbjct: 885  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLMSREPETER- 943

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             +++  +ED                 +E+  E K    L  +QLE +NWL   W+  +N 
Sbjct: 944  -VERPPAED--------------WKKSERSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 988

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 989  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1046

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1047 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1105

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1106 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1165

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1166 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1225

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1226 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMI 1285

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1286 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1343

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1344 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1403

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1404 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1463

Query: 1235 RWGT 1238
            R G 
Sbjct: 1464 RKGA 1467


>gi|389631921|ref|XP_003713613.1| chromodomain helicase DNA binding protein [Magnaporthe oryzae 70-15]
 gi|351645946|gb|EHA53806.1| chromodomain helicase DNA binding protein [Magnaporthe oryzae 70-15]
 gi|440467885|gb|ELQ37079.1| chromodomain helicase hrp3 [Magnaporthe oryzae Y34]
 gi|440478631|gb|ELQ59450.1| chromodomain helicase hrp3 [Magnaporthe oryzae P131]
          Length = 1683

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 270/654 (41%), Positives = 380/654 (58%), Gaps = 61/654 (9%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAK---------YGTTVINICDERW 661
            +E+ +KW GKS++H++W   ES       R+LENY  K         +G  V     E+W
Sbjct: 294  FEYYIKWQGKSHMHDTWETTESVHGCRGFRRLENYFRKVVEYELDMSFGEDVSPELKEQW 353

Query: 662  K--------------QPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                           + +R++++R   DG +E  VKW GL YDECTWE  D  + E    
Sbjct: 354  ALDREREQDAYDDYTKVERIVAVRDG-DGQKEYLVKWKGLQYDECTWEPSDLISSEAGDK 412

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
            + D F    R++ + D  E           +S +  +  QP+ ++ G L   QL+ LN+L
Sbjct: 413  I-DQFTTRSRRSWQSDRKE------SNPDTRSRMTKMETQPDYIQNGELREFQLKGLNFL 465

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W ++ NVILADEMGLGKTV   +F+S L    + + P LV+ PLS +P W   F  W
Sbjct: 466  ALNWARANNVILADEMGLGKTVQTVSFLSWLRNSREQEGPFLVVAPLSVIPAWCDTFNNW 525

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            +P+LN + Y G   ARA IR++E        +N      KFNVL+T+Y+ IL D+  LR 
Sbjct: 526  SPDLNYIVYLGPEAARATIREHELL------INNNPKKPKFNVLVTSYDYILLDAEFLRT 579

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+VL VDE HRLKN  S+L++ L SF+   ++L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 580  IKWQVLAVDEAHRLKNRESQLYAKLLSFNIPCKLLITGTPIQNNLAELSALLDFLNPGKV 639

Query: 948  PSLSSFEEKFNDLT---------------TTQKVEELKKLVAPHMLRRLKKDAMQNIPPK 992
                  E    ++                T  K+ +L K +AP +LRR K+    ++PPK
Sbjct: 640  LIDDDLELLGKEVENKEEDQAEEEEKRRETQAKLTQLHKAIAPFILRRTKETVESDLPPK 699

Query: 993  TERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT 1052
            TE+++ VELS +Q EYY+ +LT+NY  L +   G  + S+LNI+M+L+KV NHPY+  G 
Sbjct: 700  TEKIIRVELSDVQLEYYKNILTRNYAALSDASGG-HKASLLNIMMELKKVSNHPYMFQGV 758

Query: 1053 EPD--SGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
            E    +GS      ++  IK+S K+ LL  +L  L K+ HRVLIFSQM K+LDIL DYL 
Sbjct: 759  EERVLAGSTRREDSIKGLIKSSGKMMLLDQLLAKLKKDNHRVLIFSQMVKMLDILGDYLR 818

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYD 1167
            +      Y+R+DG++  G R+ AI  FN  D   F FLLSTR+ GLGINL TADTVIIYD
Sbjct: 819  VR--GYQYQRLDGTIPAGPRRMAINHFNAPDSEDFCFLLSTRAGGLGINLMTADTVIIYD 876

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            SD+NP AD+QAM RAHRIGQ + + VYRLV + +VEE ++  A+ KL L+ L +
Sbjct: 877  SDWNPQADLQAMARAHRIGQKRPVNVYRLVAKQTVEEEVVNRARNKLFLEYLTI 930


>gi|119607236|gb|EAW86830.1| chromodomain helicase DNA binding protein 7, isoform CRA_a [Homo
            sapiens]
 gi|119607239|gb|EAW86833.1| chromodomain helicase DNA binding protein 7, isoform CRA_a [Homo
            sapiens]
          Length = 3011

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 387/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W  I + +     ++K++ +KAK G    +  I DE +     +  
Sbjct: 841  FYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 900

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 901  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL---------- 950

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 951  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 1004

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 1005 ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1062

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1063 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1121

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1122 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1181

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1182 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1241

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1242 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1301

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1302 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1359

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1360 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1419

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1420 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1479

Query: 1235 RWGT 1238
            R G 
Sbjct: 1480 RKGA 1483


>gi|332826148|ref|XP_519780.3| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Pan
            troglodytes]
          Length = 2997

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 387/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W  I + +     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL---------- 935

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 936  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 989

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 990  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1047

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1048 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1286

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1287 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1344

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1345 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1464

Query: 1235 RWGT 1238
            R G 
Sbjct: 1465 RKGA 1468


>gi|397475364|ref|XP_003809109.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Pan paniscus]
          Length = 2997

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 387/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W  I + +     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL---------- 935

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 936  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 989

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 990  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1047

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1048 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1286

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1287 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1344

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1345 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1464

Query: 1235 RWGT 1238
            R G 
Sbjct: 1465 RKGA 1468


>gi|54112403|ref|NP_060250.2| chromodomain-helicase-DNA-binding protein 7 [Homo sapiens]
 gi|148877246|sp|Q9P2D1.3|CHD7_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 7;
            Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7
 gi|119607240|gb|EAW86834.1| chromodomain helicase DNA binding protein 7, isoform CRA_d [Homo
            sapiens]
 gi|225000838|gb|AAI72443.1| Chromodomain helicase DNA binding protein 7 [synthetic construct]
          Length = 2997

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 387/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W  I + +     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL---------- 935

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 936  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 989

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 990  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1047

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1048 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1286

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1287 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1344

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1345 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1464

Query: 1235 RWGT 1238
            R G 
Sbjct: 1465 RKGA 1468


>gi|355678720|gb|AER96196.1| chromodomain helicase DNA binding protein 7 [Mustela putorius furo]
          Length = 808

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 296/739 (40%), Positives = 415/739 (56%), Gaps = 69/739 (9%)

Query: 539  TEDLGERNDKMVVEDADVSLRDNEGLTVSEIHITCESTDKDVDVGKKTSGSVAKRVQEPA 598
            TEDL  +     V+DAD + RD+   T        ES D +  V +K   S + + Q+ +
Sbjct: 71   TEDLEFKISDEEVDDADAAGRDSPSNTSQSEQ--QESVDAEGPVVEKIMSSRSIKKQKDS 128

Query: 599  VTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VI 654
              E    +       F VK+   S +H  W     L+     ++K++ +KAK G    + 
Sbjct: 129  GEEVEVEE-------FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLS 181

Query: 655  NICDERWK----QPQRVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALE 703
             I DE +     +  R++    S D   E      VKW  LPY++ TWE    +D+  +E
Sbjct: 182  EIEDELFNPDYVEVDRIMDFARSTDERGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIE 241

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLE 762
            ++  L           + ++   + + R   D  +      +E   E K    L  +QLE
Sbjct: 242  EFEKL-----------MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLE 285

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             +NWL   W+  +N ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  
Sbjct: 286  GVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWER 344

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            EF  W   LNVV YHG   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D 
Sbjct: 345  EFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDC 402

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
              LR +PW  +V+DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL
Sbjct: 403  PELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFL 462

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
            +P+ FPS ++F ++F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL+
Sbjct: 463  EPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELT 522

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP-------- 1054
            +IQ +YYRA+L KN+  L   G      ++LN +M+LRK CNHPYLI G E         
Sbjct: 523  NIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKE 582

Query: 1055 --DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFG 1112
              ++ S +F  +  I+A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     
Sbjct: 583  THNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRY 642

Query: 1113 PKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFN 1171
            P  YER+DG V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+N
Sbjct: 643  P--YERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 700

Query: 1172 PHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG----- 1225
            P  D+QA  R HRIGQSK + +YRL+ R S E  +   A  KL LD+ +  + SG     
Sbjct: 701  PQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRESAA 760

Query: 1226 ------SQKEVEDILRWGT 1238
                  S+KE+ED+LR G 
Sbjct: 761  NGVQQLSKKEIEDLLRKGA 779


>gi|2645431|gb|AAB87382.1| CHD2 [Homo sapiens]
          Length = 1739

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 288/718 (40%), Positives = 412/718 (57%), Gaps = 88/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 306  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 365

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 366  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 425

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+ +  D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 426  SWE--DEALIGKKFQNCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 477

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 478  GGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 537

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 538  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 590

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 591  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 650

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 651  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 709

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 710  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 768

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 769  KPPEENERENGQEILLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 827

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 828  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 885

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 886  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 945

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 946  TGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 1000


>gi|119607237|gb|EAW86831.1| chromodomain helicase DNA binding protein 7, isoform CRA_b [Homo
            sapiens]
          Length = 2996

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 387/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W  I + +     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL---------- 935

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 936  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 989

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 990  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1047

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1048 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1286

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1287 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1344

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1345 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1464

Query: 1235 RWGT 1238
            R G 
Sbjct: 1465 RKGA 1468


>gi|297682946|ref|XP_002819164.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Pongo abelii]
          Length = 2997

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 387/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W  I + +     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL---------- 935

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 936  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 989

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 990  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1047

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1048 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1286

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1287 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1344

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1345 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1464

Query: 1235 RWGT 1238
            R G 
Sbjct: 1465 RKGA 1468


>gi|426359734|ref|XP_004047120.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 1
            [Gorilla gorilla gorilla]
          Length = 2997

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 386/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL---------- 935

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 936  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 989

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 990  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1047

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1048 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1286

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1287 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1344

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1345 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1464

Query: 1235 RWGT 1238
            R G 
Sbjct: 1465 RKGA 1468


>gi|406862704|gb|EKD15753.1| chromodomain helicase [Marssonina brunnea f. sp. 'multigermtubi'
            MB_m1]
          Length = 1538

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 270/651 (41%), Positives = 382/651 (58%), Gaps = 48/651 (7%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKYGTTVINIC---------DERW 661
            +E+ +KW GKS+ H +W   + L  +   R+LENY  K     I I           E+W
Sbjct: 295  FEYFIKWQGKSHYHATWETTTSLTGMRGFRRLENYYRKIVLEDIFIARGSDIPPEEKEKW 354

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                           + +RVI  R  +D T E FVKW GL Y+ CTWE       E    
Sbjct: 355  LLDRERDSDALLDYTKVERVIGTRMGEDET-EYFVKWKGLYYESCTWE-TSSLVSEIAQG 412

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    ++L  D  E   P  +G       V + EQP  +K G L   Q+  LN+L
Sbjct: 413  AIDQFLDRSSRSLISDKGESN-PNTRGPH-----VPIREQPPYVKNGQLRDFQITGLNFL 466

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K+KNVILADEMGLGKTV   +F++ L  + K + P LV+VPL+T+P W   F  W
Sbjct: 467  AYNWCKNKNVILADEMGLGKTVQTVSFMNWLRHDRKQEGPFLVVVPLTTIPAWADTFEYW 526

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            +P+LN V Y+G   +R IIR+YE  +    N+ K     KFNVLLT+YE IL D++ L  
Sbjct: 527  SPDLNYVVYNGKESSRNIIREYELLSQG--NVKKP----KFNVLLTSYEYILTDAAFLSQ 580

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ L +DE HRLKN  S+L+  L  F    R+L+TGTP+QN +GE+  L++FL P   
Sbjct: 581  IKWQFLAIDEAHRLKNRESQLYQRLLDFKAPSRLLITGTPVQNTLGELSALMDFLMPGEL 640

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
                  +    D    +K+  L   + P++LRR K+    ++PPKTE+++ VELS +Q +
Sbjct: 641  DIEDDLD--LTDEAAGEKIAALTNKIQPYILRRTKQKVENDLPPKTEKIIRVELSDVQLD 698

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFLHEM 1065
            YY+ +LT+NY  L   GKG  +QS+LNI+M+L+K  NHPY+ P  E     GS      +
Sbjct: 699  YYKNILTRNYAALNEGGKG-QKQSLLNIMMELKKASNHPYMFPNAEEKILKGSDRREDHL 757

Query: 1066 R--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
            +  I +S K+ LL  +L  L ++ HRVLIFSQM ++LDIL DYL +      ++R+DG++
Sbjct: 758  KGLIASSGKMMLLDQLLTKLKRDNHRVLIFSQMVRMLDILGDYLQLR--GYQFQRLDGTI 815

Query: 1124 SVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
            +   R+ AI  FN + S  F FLLSTR+ GLGINL TADTVII+DSD+NP AD+QAM RA
Sbjct: 816  AAAPRRMAIDHFNAEGSNDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARA 875

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            HRIGQ K + +YRLV + +VEE +L+ A+ KLML+ + + +  + KE +++
Sbjct: 876  HRIGQKKPVSIYRLVSKETVEEEVLERARNKLMLEFITIQRGVTDKEKKEL 926


>gi|334314376|ref|XP_001365054.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Monodelphis
            domestica]
          Length = 1975

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 305/780 (39%), Positives = 433/780 (55%), Gaps = 107/780 (13%)

Query: 563  GLTVSEIHITCESTDK--DVDVGKK--TSGSVAKRVQEPAVTESAQV-----KGKAVSYE 613
            G  + E H   E+ +K  D  +GKK  T  S      E     SA       +G+A   +
Sbjct: 397  GEGIEEQHDNSETIEKVMDARLGKKGATGASTTVYATEANGNPSADFDPEKDEGEA---Q 453

Query: 614  FLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTTV 653
            +L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y    
Sbjct: 454  YLIKWKGWSYIHSTWESEESLQQQKVKGMKKLENFKKKEDEIKQWLGKVSPEDVEYFNCQ 513

Query: 654  INICDERWKQPQ---RVISLRSSKDGT----------------REAFVKWTGLPYDECTW 694
              +  E  KQ Q   RVI++++SK  +                 E   KW GLPY EC+W
Sbjct: 514  QELASELNKQYQIVERVIAVKTSKSASCHTEFPAHSRKSSSNEPEYLCKWMGLPYAECSW 573

Query: 695  EKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDC----QQSEIVALTEQPE 749
            E  DE  + +K+    D F    R   K   + D        C    Q+   VAL +QP 
Sbjct: 574  E--DEALIGKKFRSCIDSF--HNRNNSKTIPTRD--------CKVLKQRPRFVALKKQPA 621

Query: 750  ELKGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLP 807
             + G    L  +QLE LNWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P
Sbjct: 622  YIGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLFGP 681

Query: 808  CLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYK 867
             LV+VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   K
Sbjct: 682  FLVVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLK 734

Query: 868  FNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTP 927
            FN L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTP
Sbjct: 735  FNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP 794

Query: 928  LQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQ 987
            LQN++ E+++LL+F+ P  F     FE+           + L K++ P +LRR+KKD  +
Sbjct: 795  LQNSLKELWSLLHFIMPEKFEFWEDFEDDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEK 853

Query: 988  NIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPY 1047
            ++P K E+++ VE+S +Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH Y
Sbjct: 854  SLPAKVEQILRVEMSVLQKQYYKWILTRNYKALSKGTRG-STSGFLNIVMELKKCCNHCY 912

Query: 1048 LI--PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILED 1105
            LI  P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +
Sbjct: 913  LIKPPEENERENGQEILLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAE 971

Query: 1106 YLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVI 1164
            YL I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+
Sbjct: 972  YLTIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVV 1029

Query: 1165 IYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--- 1221
            I+DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +   
Sbjct: 1030 IFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 1089

Query: 1222 ---------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                     N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 1090 DTTGRTVLDNNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 1146


>gi|410987205|ref|XP_003999896.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Felis catus]
          Length = 2974

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 279/664 (42%), Positives = 388/664 (58%), Gaps = 58/664 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QP 664
            EF VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     + 
Sbjct: 824  EFYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEV 883

Query: 665  QRVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFER 717
             R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L     + ER
Sbjct: 884  DRIMDFARSTDERGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLMSREPETER 943

Query: 718  QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNV 777
              +++  ++D         ++SE        E      L  +QLE +NWL   W+  +N 
Sbjct: 944  --VERPPADD--------WKKSESSR-----EYKNNNKLREYQLEGVNWLLFNWYNMRNC 988

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 989  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1046

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1047 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1105

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1106 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1165

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1166 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1225

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1226 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMI 1285

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1286 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1343

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1344 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1403

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1404 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1463

Query: 1235 RWGT 1238
            R G 
Sbjct: 1464 RKGA 1467


>gi|380814506|gb|AFE79127.1| chromodomain-helicase-DNA-binding protein 7 [Macaca mulatta]
          Length = 2998

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 386/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL---------- 935

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 936  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 989

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 990  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1047

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1048 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1286

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1287 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1344

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1345 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1464

Query: 1235 RWGT 1238
            R G 
Sbjct: 1465 RKGA 1468


>gi|355779714|gb|EHH64190.1| Chromodomain-helicase-DNA-binding protein 7 [Macaca fascicularis]
          Length = 2998

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 386/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL---------- 935

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 936  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 989

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 990  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1047

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1048 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1286

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1287 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1344

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1345 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1464

Query: 1235 RWGT 1238
            R G 
Sbjct: 1465 RKGA 1468


>gi|348579584|ref|XP_003475559.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Cavia
            porcellus]
          Length = 1674

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 290/718 (40%), Positives = 410/718 (57%), Gaps = 87/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++LVKW G S+IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 287  QYLVKWKGWSHIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVTPEDVEYFNC 346

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   R+I++++SK                     E   KW GLPY EC
Sbjct: 347  QQELASELNKQYQIVERIIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 406

Query: 693  TWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK 752
            +WE  DE  + K  H  +    F  +   K     E    K   Q+   VAL +QP  L 
Sbjct: 407  SWE--DEALIGKKFH--NCIDSFHSRNNSKTIPTREC---KALKQRPRFVALKKQPAYLG 459

Query: 753  GG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLV 810
            G    L  +QLE LNWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P L+
Sbjct: 460  GENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 519

Query: 811  LVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNV 870
            +VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN 
Sbjct: 520  VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFNA 572

Query: 871  LLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQN 930
            L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQN
Sbjct: 573  LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQN 632

Query: 931  NIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
            ++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++P
Sbjct: 633  SLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSLP 691

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI- 1049
             K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI 
Sbjct: 692  AKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLIK 750

Query: 1050 -PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
             P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL 
Sbjct: 751  PPEENERENGQEILLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLT 809

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYD 1167
            I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+D
Sbjct: 810  IKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFD 867

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLL-VYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            SD+NP  D+QA  RAHRIGQ  RL+ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 868  SDWNPQNDLQAQARAHRIGQRSRLVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 927

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 928  TGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 982


>gi|365990922|ref|XP_003672290.1| hypothetical protein NDAI_0J01550 [Naumovozyma dairenensis CBS 421]
 gi|343771065|emb|CCD27047.1| hypothetical protein NDAI_0J01550 [Naumovozyma dairenensis CBS 421]
          Length = 1520

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 283/685 (41%), Positives = 401/685 (58%), Gaps = 67/685 (9%)

Query: 610  VSYEFLVKWVGKSNIHNSWIP-ESQLKVLAKRKLENY----------------KAKYGTT 652
             +Y+FL+KW  +S++HN+W   ES   +   +K++NY                  +    
Sbjct: 233  ANYDFLIKWTDESHLHNTWQSYESLTNIRGIKKVDNYCKNHIIQEQQFRLDPYVTREDLE 292

Query: 653  VINICDER-------WKQPQRVI-SLRSSKDGTREA----FVKWTGLPYDECTWEKLDEP 700
            V++I  E+       +++P+R+I S R   DG   +     VKW  L YDE +WE   E 
Sbjct: 293  VMDIEQEKRLQEFEEFQKPERIIDSDRVIIDGEGNSELKYLVKWRQLNYDEASWENASEI 352

Query: 701  ALEKYSHLTDLFVQFERQTLKKDASEDELPRGKG--DCQQSEIVALTEQPEELKGGALFP 758
            A        D+   F+ +T         LP+       ++     L+ QP  +KGG L  
Sbjct: 353  A----DIAPDIVKHFQNRT-----ESTVLPQYSSMYTSERPRFEKLSVQPLFIKGGELRD 403

Query: 759  HQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
             QL  +NW+   W K+ N ILADEMGLGKTV   AFIS L    +   P L++VPLSTMP
Sbjct: 404  FQLTGVNWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLVFARRQNGPHLIVVPLSTMP 463

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
             W   F  WAP LNV+ Y G  ++R  IR YE++ ++P+   KK    KFNVLLTTYE I
Sbjct: 464  AWQETFEKWAPALNVIYYMGNQESRDTIRDYEFY-TNPEAKGKK--HIKFNVLLTTYEYI 520

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            L D S L G+ W+ L VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  L
Sbjct: 521  LKDRSLLGGIKWQFLAVDEAHRLKNAESSLYESLNSFKVSNRLLITGTPLQNNIKELAAL 580

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            +NFL P  F      + +  D    + + +L+K + P++LRRLKKD  +++P KTER++ 
Sbjct: 581  VNFLMPDRFMIDQEIDFEKQDEEQEEYIRDLQKRLQPYILRRLKKDVEKSLPSKTERILR 640

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE----- 1053
            VELS +Q EYY+ +LTKNY  L    KG  + S+LN++ +L+K  NHPYL    E     
Sbjct: 641  VELSDLQTEYYKNILTKNYSALTAGSKG-GRFSLLNVMNELKKASNHPYLFDNAEERVLE 699

Query: 1054 ---PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIE 1110
                 + S E +    + +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I+
Sbjct: 700  KFGAGNSSRENVLRGLLMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIK 759

Query: 1111 FGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSD 1169
                 ++R+DG+V    R+ +I  FN  D +  VFLLSTR+ GLGINL TADTVII+DSD
Sbjct: 760  --GINFQRLDGTVPSAQRRTSIDHFNAPDSTDDVFLLSTRAGGLGINLMTADTVIIFDSD 817

Query: 1170 FNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN---KSGS 1226
            +NP AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   ++     G 
Sbjct: 818  WNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGK 877

Query: 1227 QK---------EVEDILRWGTEELF 1242
            ++         E+ +IL++G  ++F
Sbjct: 878  KRKQATEPNAGELSEILKFGAGKMF 902


>gi|332213902|ref|XP_003256069.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 1
            [Nomascus leucogenys]
          Length = 2997

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 278/663 (41%), Positives = 389/663 (58%), Gaps = 58/663 (8%)

Query: 614  FLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W  I + +     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L     + ER 
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKLMSREPETER- 944

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             +++  ++D         ++SE        E      L  +QLE +NWL   W+  +N I
Sbjct: 945  -VERPPADD--------WKKSESSR-----EYRNNNKLREYQLEGVNWLLFNWYNMRNCI 990

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YHG
Sbjct: 991  LADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHG 1048

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE 
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEA 1107

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F 
Sbjct: 1108 HRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFG 1167

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 1168 DLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETVIEVELTNIQKKYYRAILEKNFT 1227

Query: 1019 ILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIK 1068
             L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I+
Sbjct: 1228 FLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQ 1287

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    R
Sbjct: 1288 AAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNLR 1345

Query: 1129 QAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            QAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ
Sbjct: 1346 QAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ 1405

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDILR 1235
            SK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+LR
Sbjct: 1406 SKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLR 1465

Query: 1236 WGT 1238
             G 
Sbjct: 1466 KGA 1468


>gi|453089622|gb|EMF17662.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
          Length = 1534

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 270/660 (40%), Positives = 386/660 (58%), Gaps = 64/660 (9%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAKYGTTVINICD---------- 658
            YEF +KW GK++ H +W    +L        R+LENY  K     I I D          
Sbjct: 227  YEFYIKWQGKAHYHATWHTWRELSDAGYKGIRRLENYYRK-----IVIIDQQVKSDPDIA 281

Query: 659  ----ERWK--------------QPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEP 700
                ERW               Q +RVI  R  ++G  E +VKW  L YD CTWE  D  
Sbjct: 282  AEDKERWNLDREGYLDSLNDYVQVERVIGARDGEEGI-EYYVKWKSLGYDACTWESADLI 340

Query: 701  ALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQ 760
            +    + + D ++    +    D  E  +        +S       QP  +KGG L   Q
Sbjct: 341  STIAQTAI-DRYLDRSAKLPVSDKIEQNI------NTRSVYKPFRTQPSYIKGGELREFQ 393

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            +  LN+L   W +  NVILADEMGLGKTV   +F++ L  + + + P +V+VPLSTMP W
Sbjct: 394  IHGLNFLAHHWCRGNNVILADEMGLGKTVQTVSFMNWLRHDRRQQGPFVVVVPLSTMPAW 453

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
               F  W P+LN V Y+G   +R IIR+YE      D   KK    KFNVLLTTYE ILA
Sbjct: 454  ADTFNNWTPDLNYVVYNGNEASRKIIREYELLV---DGNPKKV---KFNVLLTTYEYILA 507

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D+  L  + W+ + VDE HRLKN  S+L++ L  F    R+L+TGTP+QN +GE+  L++
Sbjct: 508  DAPFLSQLKWQFMAVDEAHRLKNRESQLYAKLMDFGAASRLLITGTPMQNTLGELSALMD 567

Query: 941  FLQPASFPSLSSFEEKFNDLT--TTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            FL P         +E  + ++   ++K+ EL + ++P+M+RR K+    ++PPKTE+++ 
Sbjct: 568  FLMPGKI----HVDEHIDLMSEDASKKLSELTEAISPYMIRRTKQKVENDLPPKTEKIIR 623

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--S 1056
            VELS +Q EYY+ +LT+NY  L N G   A+ S+LNI+M+L+K  NHP+L P  E    +
Sbjct: 624  VELSDVQLEYYKNILTRNYAAL-NAGSKGAKTSLLNIMMELKKASNHPFLFPAAEDRILA 682

Query: 1057 GSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPK 1114
            GS     +++  I +S K+ LL  +L  + K+GHRVLIFSQM K+LD+L DYL +     
Sbjct: 683  GSDSRDEQLKALITSSGKMMLLDQLLTKMKKDGHRVLIFSQMVKMLDLLGDYLQLR--GY 740

Query: 1115 TYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPH 1173
             ++R+DG+++ G R+ AI  FN + S+ F FLLSTR+ GLGINL TADTVI++DSD+NP 
Sbjct: 741  QFQRLDGTIAAGPRRMAIDHFNAEGSQDFCFLLSTRAGGLGINLMTADTVILFDSDWNPQ 800

Query: 1174 ADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            AD+QAM RAHRIGQ K + +YR V + +VEE +L+ A+ KLML+ + + +  + K+  D+
Sbjct: 801  ADLQAMARAHRIGQKKPVTIYRFVSKDTVEEEVLERARNKLMLEFITIQRGVTDKDARDL 860


>gi|355697982|gb|EHH28530.1| Chromodomain-helicase-DNA-binding protein 7 [Macaca mulatta]
          Length = 2998

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 386/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL---------- 935

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 936  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 989

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 990  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1047

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1048 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1286

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1287 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1344

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1345 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1464

Query: 1235 RWGT 1238
            R G 
Sbjct: 1465 RKGA 1468


>gi|119622565|gb|EAX02160.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo
            sapiens]
 gi|119622567|gb|EAX02162.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo
            sapiens]
 gi|119622569|gb|EAX02164.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo
            sapiens]
 gi|239740390|gb|ACS13730.1| chromodomain-helicase-dna-binding protein 2 [Homo sapiens]
          Length = 1739

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 288/718 (40%), Positives = 412/718 (57%), Gaps = 88/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 306  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 365

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 366  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 425

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+ +  D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 426  SWE--DEALIGKKFQNCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 477

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 478  GGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 537

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 538  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 590

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 591  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 650

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 651  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 709

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 710  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 768

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 769  KPPEENERENGQEILLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 827

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 828  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 885

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 886  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 945

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 946  TGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 1000


>gi|403288790|ref|XP_003935570.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Saimiri
            boliviensis boliviensis]
          Length = 2996

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 386/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL---------- 935

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 936  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 989

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 990  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1047

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1048 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1286

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1287 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1344

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1345 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1464

Query: 1235 RWGT 1238
            R G 
Sbjct: 1465 RKGA 1468


>gi|441647726|ref|XP_004090826.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 2
            [Nomascus leucogenys]
          Length = 2989

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 278/663 (41%), Positives = 389/663 (58%), Gaps = 58/663 (8%)

Query: 614  FLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W  I + +     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L     + ER 
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKLMSREPETER- 944

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             +++  ++D         ++SE        E      L  +QLE +NWL   W+  +N I
Sbjct: 945  -VERPPADD--------WKKSESSR-----EYRNNNKLREYQLEGVNWLLFNWYNMRNCI 990

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YHG
Sbjct: 991  LADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHG 1048

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE 
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEA 1107

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F 
Sbjct: 1108 HRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFG 1167

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 1168 DLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETVIEVELTNIQKKYYRAILEKNFT 1227

Query: 1019 ILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIK 1068
             L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I+
Sbjct: 1228 FLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQ 1287

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    R
Sbjct: 1288 AAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNLR 1345

Query: 1129 QAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            QAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ
Sbjct: 1346 QAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ 1405

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDILR 1235
            SK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+LR
Sbjct: 1406 SKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLR 1465

Query: 1236 WGT 1238
             G 
Sbjct: 1466 KGA 1468


>gi|402878334|ref|XP_003902847.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Papio anubis]
          Length = 2977

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 386/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL---------- 935

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 936  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 989

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 990  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1047

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1048 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1286

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1287 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1344

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1345 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1464

Query: 1235 RWGT 1238
            R G 
Sbjct: 1465 RKGA 1468


>gi|320589247|gb|EFX01709.1| chromodomain helicase [Grosmannia clavigera kw1407]
          Length = 1719

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 272/661 (41%), Positives = 386/661 (58%), Gaps = 71/661 (10%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVINI-------------- 656
            YE+ +KW G+S++H++W   +S       R+LENY  K     +++              
Sbjct: 293  YEYYIKWQGQSHLHDTWETTDSVAGFRGFRRLENYFRKVVDVELDMRFGGDDYTPELREQ 352

Query: 657  ----------CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYS 706
                        E + + +RV++ R+  DG  E F+KW GL YDECTWE  D  +    S
Sbjct: 353  WLLDRERDEEAHEDYTKVERVVAKRNGVDGI-EYFIKWKGLQYDECTWEAADLVS----S 407

Query: 707  HLTDLFVQF-ER--QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEA 763
            H  D   QF +R  ++   D SE  +        +S +  + +QP  + GG L   QL+ 
Sbjct: 408  HAQDKIDQFLDRISRSWTSDRSESNV------NTRSRMTKIDKQPSYVTGGELREFQLKG 461

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LN+L   W +  NVILADEMGLGKTV + +F+S L  E   + P LV+ PLS +P W   
Sbjct: 462  LNFLALNWTRDNNVILADEMGLGKTVQSVSFLSWLRNERDQEGPFLVVAPLSVIPAWCDT 521

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F+ WAP++N V Y G   AR++IR +E      D   KKT   KFNVL+T+Y+ IL D  
Sbjct: 522  FSFWAPDINYVVYLGPEAARSVIRDHELIV---DGNPKKT---KFNVLVTSYDFILQDWE 575

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             LR + W+VL VDE HRLKN  S+L++ L SF+   RVL+TGTP+QNN+ E+  LL+FL 
Sbjct: 576  FLRTIKWQVLAVDEAHRLKNRESQLYNRLVSFNIPCRVLITGTPIQNNLHELSALLDFLN 635

Query: 944  PASFPSLSSFEE------------------KFNDLTTTQKVEELKKLVAPHMLRRLKKDA 985
            P         EE                  +     T +K+ +    +AP +LRR K+  
Sbjct: 636  PGKVVVDKDLEELGQAEVKVDDEDKDEVKDELKRRETQEKLTKFHAAIAPFILRRTKETV 695

Query: 986  MQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNH 1045
              ++PPKTE+++ VELS +Q +YY+ +LT+NY  L +   G  +QS+LNI+M+L+K+ NH
Sbjct: 696  ESDLPPKTEKIIRVELSDVQLDYYKNILTRNYAALSDASGG-HKQSLLNIMMELKKISNH 754

Query: 1046 PYLIPGTEPD--SGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLD 1101
            PY+  G E     GSV    +++  I +S K+ LL  +L  L K+ HRVLIFSQM K+LD
Sbjct: 755  PYMFAGVEERVLKGSVRREDQIKGLITSSGKMMLLDQLLAKLKKDNHRVLIFSQMVKMLD 814

Query: 1102 ILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATA 1160
            +L DYL +      ++R+DG++  G R+ AI  FN + S  F FLLSTR+ GLGINL TA
Sbjct: 815  LLADYLRVR--GYQFQRLDGTIPAGPRRMAINHFNAENSDDFCFLLSTRAGGLGINLMTA 872

Query: 1161 DTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF 1220
            DTVIIYDSD+NP AD+QAM RAHRIGQ + + VYRLV + ++EE +++ A+ KL L+ L 
Sbjct: 873  DTVIIYDSDWNPQADLQAMARAHRIGQKRPVNVYRLVAKQTIEEEVVKRARNKLFLEYLT 932

Query: 1221 V 1221
            +
Sbjct: 933  I 933


>gi|395511095|ref|XP_003759797.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Sarcophilus
            harrisii]
          Length = 2999

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/663 (41%), Positives = 385/663 (58%), Gaps = 60/663 (9%)

Query: 614  FLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W  I +       ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASIEDLDKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L          
Sbjct: 886  RILDFARSTDDNGEPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFERL---------- 935

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+ ++N 
Sbjct: 936  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNTRNC 989

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 990  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1047

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1048 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P  FPS ++F ++F
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSETTFMQEF 1166

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMI 1286

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1287 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1344

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1345 RQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1464

Query: 1235 RWG 1237
            R G
Sbjct: 1465 RKG 1467


>gi|296226564|ref|XP_002758985.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 2
            [Callithrix jacchus]
          Length = 2994

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 386/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL---------- 935

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 936  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 989

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 990  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1047

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1048 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1286

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1287 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1344

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1345 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1464

Query: 1235 RWGT 1238
            R G 
Sbjct: 1465 RKGA 1468


>gi|73951131|ref|XP_536179.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 1
            [Canis lupus familiaris]
          Length = 1827

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 289/718 (40%), Positives = 411/718 (57%), Gaps = 88/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 306  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 365

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 366  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 425

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+    D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 426  SWE--DEALIGKKFQSCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPTYL 477

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 478  GGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 537

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 538  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 590

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 591  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQ 650

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 651  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 709

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 710  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 768

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 769  KPPEENERENGQEVLLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 827

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 828  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 885

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 886  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 945

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 946  TGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 1000


>gi|158259161|dbj|BAF85539.1| unnamed protein product [Homo sapiens]
          Length = 1049

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 288/718 (40%), Positives = 412/718 (57%), Gaps = 88/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 306  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 365

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 366  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 425

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+ +  D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 426  SWE--DEALIGKKFQNCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 477

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 478  GGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 537

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 538  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 590

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 591  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 650

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 651  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 709

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 710  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 768

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 769  KPPEENERENGQEILLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 827

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 828  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 885

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 886  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 945

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 946  TGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 1000


>gi|73999130|ref|XP_544097.2| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 1
            [Canis lupus familiaris]
          Length = 2995

 Score =  475 bits (1222), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 296/739 (40%), Positives = 415/739 (56%), Gaps = 69/739 (9%)

Query: 539  TEDLGERNDKMVVEDADVSLRDNEGLTVSEIHITCESTDKDVDVGKKTSGSVAKRVQEPA 598
            TEDL  +      +DAD + RD+   T        ES D +  V +K   S + + Q+ +
Sbjct: 759  TEDLEFKISDEEADDADTAGRDSPSNTSQSEQ--QESVDAEGPVVEKIMSSRSVKKQKDS 816

Query: 599  VTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VI 654
              E    +       F VK+   S +H  W     L+     ++K++ +KAK G    + 
Sbjct: 817  GEEVEVEE-------FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLS 869

Query: 655  NICDERWK----QPQRVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALE 703
             I DE +     +  R++    S D   E      VKW  LPY++ TWE    +D+  +E
Sbjct: 870  EIEDELFNPDYVEVDRIMDFARSTDERGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIE 929

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLE 762
            ++  L     + ER  +++  ++D                 +E   E K    L  +QLE
Sbjct: 930  EFEKLMSREPETER--VERPPADD--------------WKKSESSREYKNNNKLREYQLE 973

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             +NWL   W+  +N ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  
Sbjct: 974  GVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWER 1032

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            EF  W   LNVV YHG   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D 
Sbjct: 1033 EFRTWT-ELNVVVYHGSQASRRTIQSYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDC 1090

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
              LR +PW  +V+DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL
Sbjct: 1091 PELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFL 1150

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
            +P+ FPS ++F ++F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL+
Sbjct: 1151 EPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELT 1210

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP-------- 1054
            +IQ +YYRA+L KN+  L   G      ++LN +M+LRK CNHPYLI G E         
Sbjct: 1211 NIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKE 1270

Query: 1055 --DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFG 1112
              ++ S +F  +  I+A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     
Sbjct: 1271 THNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRY 1330

Query: 1113 PKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFN 1171
            P  YER+DG V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+N
Sbjct: 1331 P--YERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 1388

Query: 1172 PHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG----- 1225
            P  D+QA  R HRIGQSK + +YRL+ R S E  +   A  KL LD+ +  + SG     
Sbjct: 1389 PQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAT 1448

Query: 1226 ------SQKEVEDILRWGT 1238
                  S+KE+ED+LR G 
Sbjct: 1449 NGVQQLSKKEIEDLLRKGA 1467


>gi|392347850|ref|XP_003749947.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Rattus
            norvegicus]
          Length = 2985

 Score =  474 bits (1221), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 275/663 (41%), Positives = 387/663 (58%), Gaps = 58/663 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTTVI------NICDERWKQPQ 665
            F VK+   S +H  W     L+     ++K++ +K+K G +        ++ +  + +  
Sbjct: 815  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKSKQGQSKFLSEIEDDLFNPDYVEVD 874

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    LD+  +E++  L     + ER 
Sbjct: 875  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDLDQAKIEEFEKLMSREPETER- 933

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             +++  ++D         ++SE        E      L  +QLE +NWL   W+  +N I
Sbjct: 934  -VERPPADD--------WKKSESSR-----EYKNNNKLREYQLEGVNWLLFNWYNMRNCI 979

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YHG
Sbjct: 980  LADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHG 1037

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE 
Sbjct: 1038 SQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEA 1096

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F 
Sbjct: 1097 HRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFG 1156

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 1157 DLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFT 1216

Query: 1019 ILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIK 1068
             L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I+
Sbjct: 1217 FLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKDAHNADSPDFQLQAMIQ 1276

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    R
Sbjct: 1277 AAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNLR 1334

Query: 1129 QAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            QAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ
Sbjct: 1335 QAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ 1394

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDILR 1235
            SK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+LR
Sbjct: 1395 SKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLR 1454

Query: 1236 WGT 1238
             G 
Sbjct: 1455 KGA 1457


>gi|403258156|ref|XP_003921642.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Saimiri
            boliviensis boliviensis]
          Length = 1827

 Score =  474 bits (1221), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 288/718 (40%), Positives = 412/718 (57%), Gaps = 88/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 306  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 365

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 366  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 425

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+ +  D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 426  SWE--DEALIGKKFQNCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 477

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 478  GGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 537

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 538  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 590

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 591  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 650

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 651  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 709

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 710  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 768

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 769  KPPEENERENGQEILLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 827

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 828  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 885

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 886  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 945

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 946  TGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 1000


>gi|190347873|gb|EDK40225.2| hypothetical protein PGUG_04323 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1367

 Score =  474 bits (1221), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 290/724 (40%), Positives = 406/724 (56%), Gaps = 83/724 (11%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKY-----------GTTVINI- 656
            + Y F +KW   S++HN+W P S LK     RK++NY  +Y            TT  +I 
Sbjct: 164  LDYVFRIKWSDASHLHNTWEPWSVLKSYKGFRKVDNYIKQYILLDQEIRSDPMTTNEDIE 223

Query: 657  -----------CDERWKQPQRVI-SLRSSKDGTRE--AFVKWTGLPYDECTWEKLDEPAL 702
                         E + Q +R++ S R   DG  +   F KW  L YDECTWE  +E A 
Sbjct: 224  AMDIERERRRDEQEEYTQVERIVDSERIEVDGESQLRYFCKWKRLYYDECTWENAEEIAR 283

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLE 762
                 +T    +   + L   ++    P+     Q+     L +QP  +K G L   QL 
Sbjct: 284  MCPEQVTRYQQRVNSKILPSTSA--NYPQN----QRPRFEKLVKQPLFIKNGELRDFQLT 337

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNW+   W +++N ILADEMGLGKTV   AF+S L    +   P LV+VPLST+P W  
Sbjct: 338  GLNWMAFLWSRNENGILADEMGLGKTVQTIAFLSWLIYARRQNGPHLVVVPLSTIPAWQE 397

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
             F  WAP++N + Y G  ++RA IR YE +              KFNV+LTTYE IL D 
Sbjct: 398  TFEKWAPDVNCIYYLGNTESRATIRDYELYDG---------KKIKFNVMLTTYEYILKDR 448

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L  + W+ L VDE HRLKN+ S L+  L SF   +R+L+TGTPLQNNI E+  L NFL
Sbjct: 449  NELGSIKWQFLAVDEAHRLKNAESSLYESLRSFRVANRLLITGTPLQNNIKELAALCNFL 508

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F      + +  D    + ++EL++ + P++LRRLKKD  +++P KTER++ VELS
Sbjct: 509  LPGRFNIDQEIDFETPDAEQEKYIKELQQNIKPYILRRLKKDVEKSLPSKTERILRVELS 568

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYL-------IPGTEPD 1055
             +Q +YY+ ++TKNY  L N G   +Q S+LN++ +L+K  NHPYL       + GT   
Sbjct: 569  DMQTDYYKNIITKNYSAL-NAGNSGSQISLLNVMAELKKASNHPYLFDGAEERVLGTSTS 627

Query: 1056 SGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKT 1115
            S + E +    I +S K+ LL  +L  L KEGHRVLIFSQM ++LDIL DYL+I+     
Sbjct: 628  SANRESVLRGMIMSSGKMVLLEQLLTRLRKEGHRVLIFSQMVRMLDILGDYLSIK--GYA 685

Query: 1116 YERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHA 1174
            ++R+DG +    R+ +I  FN   SR FVFLLSTR+ GLGINL TADTVII+DSD+NP A
Sbjct: 686  FQRLDGGIPSSQRRISIDHFNAPDSRDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQA 745

Query: 1175 DIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN--------KSGS 1226
            D+QAM RAHRIGQ   + VYR V + ++EE IL+ A+KK++L+   ++        KS S
Sbjct: 746  DLQAMARAHRIGQKNHVSVYRFVSKDTIEEEILERARKKMILEYAIISLGITDPSKKSKS 805

Query: 1227 Q---KEVEDILRWGTEELF--NDSPG-----------------INGKDMGENNTSIEEAV 1264
            +    E+  IL++G   +F  ND+                   +   D+GE+N   EE +
Sbjct: 806  EPNSNELSQILKFGAGNMFKANDNQKKLEELNLDEVLNHAEDHVTTPDLGESNLGSEEFL 865

Query: 1265 RDLE 1268
            +  E
Sbjct: 866  KQFE 869


>gi|118421089|ref|NP_001262.3| chromodomain-helicase-DNA-binding protein 2 isoform 1 [Homo sapiens]
 gi|119370320|sp|O14647.2|CHD2_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 2;
            Short=CHD-2; AltName: Full=ATP-dependent helicase CHD2
 gi|225000176|gb|AAI72425.1| Chromodomain helicase DNA binding protein 2 [synthetic construct]
          Length = 1828

 Score =  474 bits (1221), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 288/718 (40%), Positives = 412/718 (57%), Gaps = 88/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 306  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 365

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 366  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 425

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+ +  D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 426  SWE--DEALIGKKFQNCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 477

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 478  GGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 537

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 538  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 590

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 591  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 650

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 651  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 709

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 710  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 768

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 769  KPPEENERENGQEILLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 827

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 828  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 885

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 886  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 945

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 946  TGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 1000


>gi|119622570|gb|EAX02165.1| chromodomain helicase DNA binding protein 2, isoform CRA_d [Homo
            sapiens]
          Length = 1857

 Score =  474 bits (1221), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 288/718 (40%), Positives = 412/718 (57%), Gaps = 88/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 270  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 329

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 330  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 389

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+ +  D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 390  SWE--DEALIGKKFQNCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 441

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 442  GGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 501

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 502  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 554

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 555  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 614

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 615  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 673

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 674  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 732

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 733  KPPEENERENGQEILLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 791

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 792  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 849

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 850  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 909

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 910  TGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 964


>gi|410225782|gb|JAA10110.1| chromodomain helicase DNA binding protein 2 [Pan troglodytes]
 gi|410301988|gb|JAA29594.1| chromodomain helicase DNA binding protein 2 [Pan troglodytes]
 gi|410351375|gb|JAA42291.1| chromodomain helicase DNA binding protein 2 [Pan troglodytes]
          Length = 1828

 Score =  474 bits (1221), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 288/718 (40%), Positives = 412/718 (57%), Gaps = 88/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 306  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 365

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 366  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 425

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+ +  D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 426  SWE--DEALIGKKFQNCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 477

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 478  GGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 537

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 538  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 590

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 591  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 650

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 651  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 709

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 710  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 768

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 769  KPPEENERENGQEILLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 827

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 828  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 885

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 886  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 945

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 946  TGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 1000


>gi|291388024|ref|XP_002710542.1| PREDICTED: chromodomain helicase DNA binding protein 7 [Oryctolagus
            cuniculus]
          Length = 2997

 Score =  474 bits (1221), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 385/664 (57%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L          
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKL---------- 935

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 936  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 989

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 990  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1047

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1048 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1286

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1287 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1344

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1345 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1464

Query: 1235 RWGT 1238
            R G 
Sbjct: 1465 RKGA 1468


>gi|397491801|ref|XP_003816832.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 2 [Pan paniscus]
          Length = 1829

 Score =  474 bits (1221), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 288/718 (40%), Positives = 412/718 (57%), Gaps = 88/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 306  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 365

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 366  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 425

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+ +  D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 426  SWE--DEALIGKKFQNCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 477

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 478  GGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 537

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 538  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 590

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 591  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 650

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 651  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 709

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 710  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 768

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 769  KPPEENERENGQEILLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 827

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 828  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 885

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 886  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 945

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 946  TGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 1000


>gi|390464184|ref|XP_002806940.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 2 [Callithrix jacchus]
          Length = 2054

 Score =  474 bits (1221), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 288/718 (40%), Positives = 412/718 (57%), Gaps = 88/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 306  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 365

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 366  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 425

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+ +  D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 426  SWE--DEALIGKKFQNCIDGF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPTYL 477

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 478  GGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 537

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 538  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 590

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 591  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 650

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 651  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 709

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 710  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 768

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 769  KPPEENERENGQEILLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 827

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 828  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 885

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 886  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 945

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 946  TGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 1000


>gi|355693011|gb|EHH27614.1| Chromodomain-helicase-DNA-binding protein 2 [Macaca mulatta]
 gi|355778318|gb|EHH63354.1| Chromodomain-helicase-DNA-binding protein 2 [Macaca fascicularis]
 gi|380809122|gb|AFE76436.1| chromodomain-helicase-DNA-binding protein 2 isoform 1 [Macaca
            mulatta]
 gi|383415421|gb|AFH30924.1| chromodomain-helicase-DNA-binding protein 2 isoform 1 [Macaca
            mulatta]
          Length = 1828

 Score =  474 bits (1221), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 288/718 (40%), Positives = 412/718 (57%), Gaps = 88/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 306  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 365

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 366  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 425

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+ +  D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 426  SWE--DEALIGKKFQNCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 477

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 478  GGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 537

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 538  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 590

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 591  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 650

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 651  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 709

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 710  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 768

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 769  KPPEENERENGQEILLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 827

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 828  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 885

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 886  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 945

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 946  TGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 1000


>gi|297299473|ref|XP_002805403.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like, partial
            [Macaca mulatta]
          Length = 2990

 Score =  474 bits (1221), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 386/664 (58%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 855  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 914

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWEK---LDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE+   +D+  +E++  L          
Sbjct: 915  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDIDQAKIEEFEKL---------- 964

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 965  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 1018

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 1019 ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1076

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1077 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1135

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1136 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1195

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1196 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1255

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1256 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1315

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1316 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1373

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1374 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1433

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1434 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1493

Query: 1235 RWGT 1238
            R G 
Sbjct: 1494 RKGA 1497


>gi|351713650|gb|EHB16569.1| Chromodomain-helicase-DNA-binding protein 7 [Heterocephalus glaber]
          Length = 2988

 Score =  474 bits (1220), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 385/664 (57%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 824  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 883

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L          
Sbjct: 884  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKL---------- 933

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 934  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 987

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 988  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1045

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1046 GSQASRRTIQLYEMYFKDPQGRVMK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1104

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1105 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1164

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1165 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1224

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1225 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1284

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1285 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1342

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1343 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1402

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1403 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1462

Query: 1235 RWGT 1238
            R G 
Sbjct: 1463 RKGA 1466


>gi|238879188|gb|EEQ42826.1| chromo domain protein 1 [Candida albicans WO-1]
          Length = 1410

 Score =  474 bits (1220), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 283/684 (41%), Positives = 391/684 (57%), Gaps = 65/684 (9%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKY----------------GTT 652
            + Y F +KW   S++HN+W     LK     RKL+NY  ++                   
Sbjct: 194  IDYLFKIKWTDASHLHNTWEKYQDLKSFKGFRKLDNYIKQFIIYDDEIRNDPLTTKEDLE 253

Query: 653  VINICDERWKQPQ-------RVI-SLRSSKDGTR---EAFVKWTGLPYDECTWEKLDEPA 701
             ++I  ER +  Q       R++ S R   D      + FVKW  L YDEC+WE  +E A
Sbjct: 254  AMDIERERKRDEQDEYTHVERIVDSERVETDDGETKLQYFVKWKRLYYDECSWEDAEEIA 313

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQL 761
                  +T    +   + L   ++   L       Q+     L +QP  +K G L   QL
Sbjct: 314  KIAPEQVTKYQQRLNSKILPSLSANYPL------SQRPRFEKLFKQPVFIKNGELRDFQL 367

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
              LNW+   W +++N ILADEMGLGKTV   AF+S L    +   P LV+VPLST+P W 
Sbjct: 368  TGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHLVVVPLSTVPAWQ 427

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
              F  WAP++N V Y G  +AR  IR+YE +     N N+K    KFNVLLTTYE IL D
Sbjct: 428  ETFEKWAPDVNCVYYLGNGEARKTIREYELY-----NQNRKP---KFNVLLTTYEYILKD 479

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
             + L    W+ L VDE HRLKN+ S L+  L  F   +R+L+TGTPLQNN+ E+  L NF
Sbjct: 480  KNELGAFKWQFLAVDEAHRLKNAESSLYEALKGFKVSNRLLITGTPLQNNVKELAALCNF 539

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L P  F      + +  D    Q +++L+K ++P +LRRLKKD  +++P K+ER++ VEL
Sbjct: 540  LMPGKFTIDQEIDFETIDSEQEQYIKDLQKKISPFILRRLKKDVEKSLPSKSERILRVEL 599

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE------PD 1055
            S IQ EYY+ ++TKNY  L N G   +Q S+LNI+ +L+K  NHPYL  G E        
Sbjct: 600  SDIQTEYYKNIITKNYAAL-NAGNRGSQISLLNIMSELKKASNHPYLFDGAEDKVLDKAG 658

Query: 1056 SGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKT 1115
            S S E   +  + +S K+ LL  +L  L KEGHRVLIFSQM ++LDIL DY+ I+     
Sbjct: 659  SSSRENTLKGIVMSSGKMVLLEQLLSRLRKEGHRVLIFSQMVRMLDILGDYMFIK--GYQ 716

Query: 1116 YERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHA 1174
            ++R+DG+V    R+ AI  FN   S+ F FLLSTR+ GLGINL TADTVII+DSD+NP A
Sbjct: 717  FQRLDGTVPSSKRKIAIDHFNAPGSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQA 776

Query: 1175 DIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN--------KSGS 1226
            D+QAM RAHRIGQ   + VYR V + +VEE+IL+ A+KK++L+   ++        K+GS
Sbjct: 777  DLQAMARAHRIGQKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIISLGITDPSAKNGS 836

Query: 1227 Q-----KEVEDILRWGTEELFNDS 1245
            +      E+  IL++G   +F ++
Sbjct: 837  KTEPSTNELSQILKFGAGTMFKEN 860


>gi|449445043|ref|XP_004140283.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Cucumis
            sativus]
          Length = 1777

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 288/694 (41%), Positives = 408/694 (58%), Gaps = 74/694 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK-RKLENYKAK------YGTTV----INICD--- 658
            EFL+KW G+S++H  W P S+L+ L+  +K+ NY  K      Y  +V    I + D   
Sbjct: 467  EFLIKWKGQSHLHCQWKPFSELQYLSGFKKVLNYTKKVMDEIRYRKSVSREEIEVYDVSK 526

Query: 659  -------ERWKQPQRVISLRSSKDGTR----EAFVKWTGLPYDECTWEK-----LDEPAL 702
                   ++  Q +RVI+ R SKDG+     E  VKW GL Y E TWEK       + A+
Sbjct: 527  EMDLDLIKQNSQVERVIADRISKDGSGDVVPEYLVKWQGLSYAEATWEKDVDISFAQDAI 586

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVA------LTEQPEELKGGAL 756
            ++Y  LT   V+ E   L+             +C     V       L EQPE L GG L
Sbjct: 587  DEYK-LTWHHVEAEMMPLQLSFHMWNCRHTISNCHVRFHVVPVSLRKLDEQPEWLMGGKL 645

Query: 757  FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLST 816
              +QLE LN+L   W    NVILADEMGLGKTV + + +  L    +   P LV+VPLST
Sbjct: 646  RDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIYGPFLVVVPLST 705

Query: 817  MPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSS-YKFNVLLTTY 875
            + NW  EF  W P++NV+ Y G   +R + +Q+E+        NK+T    KFN LLTTY
Sbjct: 706  LSNWAKEFRKWLPDMNVIVYVGTRASREVCQQHEFE-------NKRTGRPIKFNALLTTY 758

Query: 876  EMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEM 935
            E++L D + L  + W  L+VDE HRLKNS ++L++ L+ FS ++++L+TGTPLQN++ E+
Sbjct: 759  EVVLKDRAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEEL 818

Query: 936  YNLLNFLQPASFPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKT 993
            + LL+FL P  F S   F   + +L++  ++E   L   + PH+LRR+ KD  +++PPK 
Sbjct: 819  WALLHFLDPDKFKSKDDFIHNYKNLSSFDEIELANLHMELKPHILRRVIKDVEKSLPPKI 878

Query: 994  ERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP--- 1050
            ER++ VE+S +Q +YY+ +L +N+  L N G    Q S+LNIV++L+K CNHP+L     
Sbjct: 879  ERILRVEMSPLQKQYYKWILERNFHDL-NKGVRGNQVSLLNIVVELKKCCNHPFLFESAD 937

Query: 1051 ---GTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
               G + DS     L +  I +S KL +L  +L  L++  HRVLIFSQM ++LDIL DY+
Sbjct: 938  HGYGGDFDSNDSSKL-DRTIWSSGKLVILDKLLMRLHETKHRVLIFSQMVRMLDILADYM 996

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
            +  +    ++R+DGS     RQ A+  FN   S  F FLLSTR+ GLGINLATADTVII+
Sbjct: 997  S--YRGFQFQRLDGSTKAEFRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIF 1054

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS 1226
            DSD+NP  D+QAM+RAHRIGQ + + +YR V  +SVEE IL+ AKKK++LD L + K  +
Sbjct: 1055 DSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSSSVEEDILERAKKKMVLDHLVIQKLNA 1114

Query: 1227 QKEVED----------------ILRWGTEELFND 1244
            +  +E                 ILR+G EELF +
Sbjct: 1115 EGRLEKKEAKKGIGFDKNELSAILRFGAEELFKE 1148


>gi|410076200|ref|XP_003955682.1| hypothetical protein KAFR_0B02490 [Kazachstania africana CBS 2517]
 gi|372462265|emb|CCF56547.1| hypothetical protein KAFR_0B02490 [Kazachstania africana CBS 2517]
          Length = 1459

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 291/726 (40%), Positives = 408/726 (56%), Gaps = 80/726 (11%)

Query: 611  SYEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY----------------GTTV 653
            S++FL+KW  +S++HNSW   ES   +   ++L+NY  ++                   V
Sbjct: 205  SFQFLIKWADQSHLHNSWETYESLDGIRGIKRLDNYCKQFIIQDQQVRLDPYITREDLEV 264

Query: 654  INICDER-------WKQPQRVISLR--SSKDGTRE--AFVKWTGLPYDECTWEKLDEPAL 702
            +++  ER       +  P+RVI  +  +  DGT +    VKW  L YDE TWE     A+
Sbjct: 265  MDMESERRLDEFQEYTLPERVIDSQRVTLDDGTSQLQYLVKWCHLNYDESTWEN----AV 320

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLE 762
            +      +    F+ ++  +   +          Q+     L  QP  +K G L   QL 
Sbjct: 321  DLVKLAPNEVTHFQNRSTSRHLPQ--FSTNYASNQRPHFEKLDAQPSYIKSGELRDFQLT 378

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             +NW+   W K+ N ILADEMGLGKTV   +FIS L    K   P LV+VPLSTMP W  
Sbjct: 379  GINWMAFLWSKNDNGILADEMGLGKTVQMVSFISWLVYSRKQNGPHLVVVPLSTMPAWQE 438

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
             FA WAP LN V Y G  K+R  IR++E++ ++P    KK  + KFNVLLTTYE IL D 
Sbjct: 439  TFAKWAPGLNCVCYMGNQKSRDTIREFEFY-TNPQAKGKK--NVKFNVLLTTYEYILKDR 495

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
              L  + W+ L VDE HRLKN+ S L+  LNSF    R+L+TGTPLQNNI E+  L+NFL
Sbjct: 496  DELGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVHDRLLITGTPLQNNIKELAALVNFL 555

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F      + +  D    + + EL K + P +LRRLKKD  +++P KTER++ VELS
Sbjct: 556  MPGRFTIDQEIDFENQDDEQEEYIRELHKRLQPFILRRLKKDVEKSLPSKTERILRVELS 615

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP------DS 1056
             IQ EYY+ +LTKNY+ L+   KG    S+LN++ +L+K  NHPYL    E         
Sbjct: 616  DIQTEYYKNILTKNYRALQAGAKG-GHISLLNVMSELKKASNHPYLFDNAEDRVLQKFGD 674

Query: 1057 GSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPK 1114
            G +   + +R  I +S K+ LL  +L  L K+GHRVLIFSQM ++LDI+ DYL+I+    
Sbjct: 675  GRMTRDNILRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRMLDIMGDYLSIK--GI 732

Query: 1115 TYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPH 1173
             ++R+DG++    R+ +I  FN  D    VFLLSTR+ GLGINL TADTVII+DSD+NP 
Sbjct: 733  NFQRLDGTIPSAQRRISIDHFNAPDSVDDVFLLSTRAGGLGINLMTADTVIIFDSDWNPQ 792

Query: 1174 ADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGS 1226
            AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   +       NK   
Sbjct: 793  ADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKYTK 852

Query: 1227 QK-----EVEDILRWGTEELF--NDSP-----------------GINGKDMGENNTSIEE 1262
            +      E+ +IL++G   +F  ND+                   I   D+GE++   EE
Sbjct: 853  KNDMNAGELSEILKFGAGNMFTANDNQKKLEDLNLDDVLNHAEDHITTPDLGESHLGGEE 912

Query: 1263 AVRDLE 1268
             ++  E
Sbjct: 913  FLKQFE 918


>gi|344273113|ref|XP_003408371.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Loxodonta
            africana]
          Length = 2997

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 298/739 (40%), Positives = 414/739 (56%), Gaps = 69/739 (9%)

Query: 539  TEDLGERNDKMVVEDADVSLRDNEGLTVSEIHITCESTDKDVDVGKKTSGSVAKRVQEPA 598
            TEDL  +      +D D + RD+   T        ES D +  V +K   S + R Q+  
Sbjct: 760  TEDLEFKISDEEADDGDAAGRDSPSNTSQSEQ--QESVDAEGPVVEKIMSSRSVRKQK-- 815

Query: 599  VTESAQVKGKAVSYEFLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VI 654
              ES +   +    EF VK+   S +H  W  I + +     ++K++ +KAK G    + 
Sbjct: 816  --ESGE---EVEVEEFYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLS 870

Query: 655  NICDERWK----QPQRVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALE 703
             I DE +     +  R++    S D   E      VKW  LPY++ TWE    LD   +E
Sbjct: 871  EIEDELFNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDLDPAKVE 930

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLE 762
            ++  L           + ++   + + R   D  +      +E   E K    L  +QLE
Sbjct: 931  EFEKL-----------MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLE 974

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             +NWL   W+  +N ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  
Sbjct: 975  GVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWER 1033

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            EF  W   LNVV YHG   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D 
Sbjct: 1034 EFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDC 1091

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
              LR +PW  +V+DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL
Sbjct: 1092 PELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFL 1151

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
            +P+ FPS ++F ++F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL+
Sbjct: 1152 EPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELT 1211

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP-------- 1054
            +IQ +YYRA+L KN+  L   G      ++LN +M+LRK CNHPYLI G E         
Sbjct: 1212 NIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKE 1271

Query: 1055 --DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFG 1112
               + S +F  +  I+A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     
Sbjct: 1272 THSAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRY 1331

Query: 1113 PKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFN 1171
            P  YER+DG V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+N
Sbjct: 1332 P--YERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN 1389

Query: 1172 PHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG----- 1225
            P  D+QA  R HRIGQSK + +YRL+ R S E  +   A  KL LD+ +  + SG     
Sbjct: 1390 PQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAT 1449

Query: 1226 ------SQKEVEDILRWGT 1238
                  S+KE+ED+LR G 
Sbjct: 1450 NGVQQLSKKEIEDLLRKGA 1468


>gi|335286466|ref|XP_003355099.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 7 [Sus scrofa]
          Length = 2983

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 298/738 (40%), Positives = 418/738 (56%), Gaps = 67/738 (9%)

Query: 539  TEDLGERNDKMVVEDADVSLRDNEGLTVSEIHITCESTDKDVDVGKKTSGSVAKRVQEPA 598
            TEDL  +      +DAD + RD+   T        ES D +  V +K   S + + Q+  
Sbjct: 753  TEDLEFKISDEEPDDADAAGRDSPSNTSQSEQ--QESVDAEGPVVEKIMSSRSVKKQK-- 808

Query: 599  VTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VI 654
              ES +   +    EF VK+   S +H  W     L+     ++K++ +KAK G    + 
Sbjct: 809  --ESGE---EVEVEEFYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLS 863

Query: 655  NICDERWK----QPQRVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALE 703
             I DE +     +  R++    S D   E      VKW  LPY++ TWE    +D+  +E
Sbjct: 864  EIEDELFNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIE 923

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEA 763
            ++  L     + ER  +++  ++D         ++SE        E      L  +QLE 
Sbjct: 924  EFEKLMSREPETER--VERPPADD--------WKKSESSR-----EYKNNNKLREYQLEG 968

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            +NWL   W+  +N ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  E
Sbjct: 969  VNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWERE 1027

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F  W   LNVV YHG   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D  
Sbjct: 1028 FRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCP 1085

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             LR +PW  +V+DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+
Sbjct: 1086 ELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLE 1145

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            P+ FPS ++F ++F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++
Sbjct: 1146 PSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTN 1205

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP--------- 1054
            IQ +YYRA+L KN+  L   G      ++LN +M+LRK CNHPYLI G E          
Sbjct: 1206 IQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKET 1265

Query: 1055 -DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
             ++ S +F  +  I+A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P
Sbjct: 1266 HNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP 1325

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              YER+DG V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP
Sbjct: 1326 --YERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP 1383

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG------ 1225
              D+QA  R HRIGQSK + +YRL+ R S E  +   A  KL LD+ +  + SG      
Sbjct: 1384 XNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAPN 1443

Query: 1226 -----SQKEVEDILRWGT 1238
                 S+KE+ED+LR G 
Sbjct: 1444 GVQQLSKKEIEDLLRKGA 1461


>gi|395859802|ref|XP_003802219.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Otolemur
            garnettii]
          Length = 3071

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 385/664 (57%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 899  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 958

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L          
Sbjct: 959  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKL---------- 1008

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 1009 -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 1062

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 1063 ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1120

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1121 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1179

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1180 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1239

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1240 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1299

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1300 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1359

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1360 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1417

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1418 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1477

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1478 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1537

Query: 1235 RWGT 1238
            R G 
Sbjct: 1538 RKGA 1541


>gi|432094673|gb|ELK26153.1| Chromodomain-helicase-DNA-binding protein 7 [Myotis davidii]
          Length = 2987

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 278/663 (41%), Positives = 387/663 (58%), Gaps = 58/663 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 818  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 877

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L    +  E +
Sbjct: 878  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFERL----ISREPE 933

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
            T++ +    +      D ++SE        E      L  +QLE +NWL   W+  +N I
Sbjct: 934  TVRVERPPAD------DWKKSESSR-----EYKNNNKLREYQLEGVNWLLFNWYNMRNCI 982

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YHG
Sbjct: 983  LADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHG 1040

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE 
Sbjct: 1041 SQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEA 1099

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F 
Sbjct: 1100 HRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFG 1159

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 1160 DLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFT 1219

Query: 1019 ILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIK 1068
             L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I+
Sbjct: 1220 FLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQ 1279

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    R
Sbjct: 1280 AAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNLR 1337

Query: 1129 QAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            QAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ
Sbjct: 1338 QAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ 1397

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDILR 1235
            SK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+LR
Sbjct: 1398 SKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLR 1457

Query: 1236 WGT 1238
             G 
Sbjct: 1458 KGA 1460


>gi|281203782|gb|EFA77978.1| myb domain-containing protein [Polysphondylium pallidum PN500]
          Length = 2536

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 265/635 (41%), Positives = 373/635 (58%), Gaps = 40/635 (6%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVL--AKRKLENYKAKYGTTVINICDER--------WK 662
            + LVKW G S +H SW+  +QL      K +L+ Y+        N   +R          
Sbjct: 294  QVLVKWKGLSYLHCSWVDSNQLIQTRSGKARLQRYQQTKQQEAENAAAKRPPKEDYKEMM 353

Query: 663  QPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKL----DEPALEKYSHLTDLFVQFERQ 718
            + ++++  R + D   E ++KW    Y  CTWE      DE A+  ++    +       
Sbjct: 354  KIEKILDKRINSDNETEYYIKWRAQTYLNCTWELASDVNDEEAVAAFAQFIKM------- 406

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALF-PHQLEALNWLRKCWHKSKNV 777
                 +SE  +P         E  A    PE  K G L  P+QL+ LNWL  CW++ +N 
Sbjct: 407  ---PSSSELTVPPRPAPSGWKEFTA---SPEYFKKGRLLRPYQLQGLNWLSFCWYQKRNS 460

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            IL DEMGLGKTV + + I +L      + P L + PL+T+P+W  EF  W  +  V+ YH
Sbjct: 461  ILGDEMGLGKTVQSVSIIETLRKTQGIRGPFLCVAPLTTIPHWKREFESWT-DQKVLVYH 519

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
               +AR IIR YE++ +D     + T+  KFN L+TTYEM+++D + L  + W  LV+DE
Sbjct: 520  DHGQARPIIRDYEFYYTDSKG--RTTNVTKFNTLITTYEMVISDRAQLSKIHWRYLVIDE 577

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL + L ++ + H +LLTGTPLQNN  E+++LLNF++P  F  L  F E+F
Sbjct: 578  AHRLKNKSCKLTNELRTYKYDHLLLLTGTPLQNNTQELWSLLNFMEPEKFAHLEEFLEEF 637

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL   ++V +L++++ P++LRR+K++  ++I PK E +V VEL++IQ +YYRA+  KN+
Sbjct: 638  GDLKQAEQVTKLQEVLRPYLLRRMKENVEKSIAPKEETIVEVELTTIQKKYYRAIYEKNF 697

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSV-----EFLHEMRIKASAK 1072
              LR  GKG    S+LNI+M+LRK CNHPYLI G E    S+     + ++   I+AS K
Sbjct: 698  TFLRKGGKGNG-PSLLNIMMELRKCCNHPYLIKGAEDSETSMLMKNSDAIYHKLIQASGK 756

Query: 1073 LTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAI 1132
            L L+  +L  L    H+VLIFSQM  +LDIL+DYL   F    +ER+DGS+   DRQAAI
Sbjct: 757  LVLIDKLLPKLKAGNHKVLIFSQMVSVLDILDDYLT--FRGYLHERIDGSIKAEDRQAAI 814

Query: 1133 TRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRL 1191
             RF+  D  RFVFLL TR+ G+GINL  ADTVII+DSD+NP  D+QA  R HRIGQ K +
Sbjct: 815  DRFSAPDSDRFVFLLCTRAGGMGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMV 874

Query: 1192 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS 1226
             VYRLV R + E  +   A KKL LD+  + K  S
Sbjct: 875  KVYRLVTRNTYERIMFDRASKKLGLDRAVLTKINS 909


>gi|426248049|ref|XP_004017778.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Ovis aries]
          Length = 1827

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 288/718 (40%), Positives = 411/718 (57%), Gaps = 88/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 305  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 364

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 365  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 424

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+    D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 425  SWE--DEALIGKKFQSCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 476

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 477  GGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 536

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 537  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 589

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 590  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 649

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 650  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 708

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH +LI
Sbjct: 709  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCHLI 767

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 768  KPPEENERENGQEVLLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 826

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 827  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 884

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 885  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 944

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 945  TGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 999


>gi|68468949|ref|XP_721533.1| hypothetical protein CaO19.3035 [Candida albicans SC5314]
 gi|68469498|ref|XP_721262.1| hypothetical protein CaO19.10553 [Candida albicans SC5314]
 gi|46443171|gb|EAL02455.1| hypothetical protein CaO19.10553 [Candida albicans SC5314]
 gi|46443453|gb|EAL02735.1| hypothetical protein CaO19.3035 [Candida albicans SC5314]
          Length = 1410

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 283/684 (41%), Positives = 391/684 (57%), Gaps = 65/684 (9%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKY----------------GTT 652
            + Y F +KW   S++HN+W     LK     RKL+NY  ++                   
Sbjct: 194  IDYLFKIKWTDASHLHNTWEKYQDLKSFKGFRKLDNYIKQFIIYDDEIRNDPLTTKEDLE 253

Query: 653  VINICDERWKQPQ-------RVI-SLRSSKDGTR---EAFVKWTGLPYDECTWEKLDEPA 701
             ++I  ER +  Q       R++ S R   D      + FVKW  L YDEC+WE  +E A
Sbjct: 254  AMDIERERKRDEQDEYTHVERIVDSERVETDDGETKLQYFVKWKRLYYDECSWEDAEEIA 313

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQL 761
                  +T    +   + L   ++   L       Q+     L +QP  +K G L   QL
Sbjct: 314  KIAPEQVTKYQQRLNSKILPSLSANYPL------SQRPRFEKLFKQPVFIKNGELRDFQL 367

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
              LNW+   W +++N ILADEMGLGKTV   AF+S L    +   P LV+VPLST+P W 
Sbjct: 368  TGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHLVVVPLSTVPAWQ 427

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
              F  WAP++N V Y G  +AR  IR+YE +     N N+K    KFNVLLTTYE IL D
Sbjct: 428  ETFEKWAPDVNCVYYLGNGEARKTIREYELY-----NQNRKP---KFNVLLTTYEYILKD 479

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
             + L    W+ L VDE HRLKN+ S L+  L  F   +R+L+TGTPLQNN+ E+  L NF
Sbjct: 480  KNELGAFKWQFLAVDEAHRLKNAESSLYEALKGFKVSNRLLITGTPLQNNVKELAALCNF 539

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L P  F      + +  D    Q +++L+K ++P +LRRLKKD  +++P K+ER++ VEL
Sbjct: 540  LMPGKFTIDQEIDFETIDSEQEQYIKDLQKKISPFILRRLKKDVEKSLPSKSERILRVEL 599

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE------PD 1055
            S IQ EYY+ ++TKNY  L N G   +Q S+LNI+ +L+K  NHPYL  G E        
Sbjct: 600  SDIQTEYYKNIITKNYAAL-NAGNRGSQISLLNIMSELKKASNHPYLFDGAEDKVLDKAG 658

Query: 1056 SGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKT 1115
            S S E   +  + +S K+ LL  +L  L KEGHRVLIFSQM ++LDIL DY+ I+     
Sbjct: 659  SPSRENTLKGIVMSSGKMVLLEQLLSRLRKEGHRVLIFSQMVRMLDILGDYMFIK--GYQ 716

Query: 1116 YERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHA 1174
            ++R+DG+V    R+ AI  FN   S+ F FLLSTR+ GLGINL TADTVII+DSD+NP A
Sbjct: 717  FQRLDGTVPSSKRKIAIDHFNAPGSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQA 776

Query: 1175 DIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN--------KSGS 1226
            D+QAM RAHRIGQ   + VYR V + +VEE+IL+ A+KK++L+   ++        K+GS
Sbjct: 777  DLQAMARAHRIGQKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIISLGITDPSAKNGS 836

Query: 1227 Q-----KEVEDILRWGTEELFNDS 1245
            +      E+  IL++G   +F ++
Sbjct: 837  KTEPSTNELSQILKFGAGTMFKEN 860


>gi|148673732|gb|EDL05679.1| mCG20155 [Mus musculus]
          Length = 2985

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 273/664 (41%), Positives = 385/664 (57%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTTVI------NICDERWKQPQ 665
            F VK+   S +H  W     L+     ++K++ +K+K G +        ++ +  + +  
Sbjct: 816  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKSKQGQSKFLSEIEDDLFNPDYVEVD 875

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L          
Sbjct: 876  RIMDFARSTDDRGEPVIHYLVKWCSLPYEDSTWELKQDIDQTKIEEFEKL---------- 925

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 926  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 979

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 980  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1037

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1038 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1096

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1097 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1156

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1157 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1216

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1217 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1276

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1277 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1334

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1335 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1394

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1395 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1454

Query: 1235 RWGT 1238
            R G 
Sbjct: 1455 RKGA 1458


>gi|124487249|ref|NP_001074886.1| chromodomain-helicase-DNA-binding protein 7 [Mus musculus]
 gi|148877247|sp|A2AJK6.1|CHD7_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 7;
            Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7
          Length = 2986

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 273/664 (41%), Positives = 385/664 (57%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTTVI------NICDERWKQPQ 665
            F VK+   S +H  W     L+     ++K++ +K+K G +        ++ +  + +  
Sbjct: 816  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKSKQGQSKFLSEIEDDLFNPDYVEVD 875

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L          
Sbjct: 876  RIMDFARSTDDRGEPVIHYLVKWCSLPYEDSTWELKQDIDQTKIEEFEKL---------- 925

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 926  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 979

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 980  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1037

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1038 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1096

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1097 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1156

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1157 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1216

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1217 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMI 1276

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1277 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1334

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1335 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1394

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1395 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLL 1454

Query: 1235 RWGT 1238
            R G 
Sbjct: 1455 RKGA 1458


>gi|392593853|gb|EIW83178.1| transcription regulator [Coniophora puteana RWD-64-598 SS2]
          Length = 1321

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 257/614 (41%), Positives = 373/614 (60%), Gaps = 51/614 (8%)

Query: 659  ERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA------LEKYSHLTDLF 712
            E +K  +R++S R   +G  E F KWTGL Y+ CTWE  +E A      +E Y  + +  
Sbjct: 174  ETYKVVERIVSHREGAEGDTEYFCKWTGLNYEHCTWETAEEVAPIAKAQIEAY-RIREAE 232

Query: 713  VQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWH 772
             +F  ++++   + ++ P+     +  + ++ T       GG L   QL  LNWL   W 
Sbjct: 233  AKFPYKSIQ--YARNQRPKAHRMTKDPDYISET-------GGELKDFQLTGLNWLAYSWS 283

Query: 773  KSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLN 832
            +  N ILADEMGLGKTV   +F+S L+ E +   P LV+VPLST+  W ++FA WAP++N
Sbjct: 284  EGVNGILADEMGLGKTVQTVSFLSYLFHEMQQYGPFLVIVPLSTITAWQSQFATWAPDIN 343

Query: 833  VVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEV 892
            V+ Y G A AR +IR YE+ AS     NKK    K NVLLTTYE++L D+  L  + W  
Sbjct: 344  VITYIGTAAAREVIRTYEFGAS-----NKKL---KMNVLLTTYELVLRDAKELADIKWHA 395

Query: 893  LVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSS 952
            L+VDE HRLKNS S+L+  L SF    ++L+TGTPLQNN+ E+ +L++FL P  F     
Sbjct: 396  LIVDEAHRLKNSESQLYEALRSFPSASKLLITGTPLQNNVKELLSLMHFLMPEKFALSDE 455

Query: 953  FEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAM 1012
            F+   ND    +K++EL K +   MLRRLK+D + ++P K+ER++ VE+S++Q  +Y+ +
Sbjct: 456  FD--LNDADHEEKIKELHKQLESLMLRRLKRDVLTSLPTKSERILRVEMSALQTHFYKNI 513

Query: 1013 LTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAK 1072
            LTKN+Q L     G    S+LNI M+L+K  NHPYL  G E  + + E   +  +  S K
Sbjct: 514  LTKNFQGLVKSANGNNNISLLNIAMELKKAANHPYLFDGAEARTDNQEETLKGLVMNSGK 573

Query: 1073 LTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAI 1132
            + LL  +L  L ++GHRVLIFSQM ++LDIL DY+N+      ++R+DG V+   R+ +I
Sbjct: 574  MVLLDKLLARLRQDGHRVLIFSQMVRMLDILSDYMNLR--GYQHQRLDGMVASDIRKKSI 631

Query: 1133 TRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRL 1191
              FN   S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM RAHRIGQ   +
Sbjct: 632  AHFNAPGSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHV 691

Query: 1192 LVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------------------SGSQKE 1229
             VYR V + +VEE +L+ AKKK++L+   +N+                      + S+ E
Sbjct: 692  SVYRFVSKDTVEEDVLERAKKKMILEYAIINQIDTTQAHLSSKGDKVKDAAKPDNLSKDE 751

Query: 1230 VEDILRWGTEELFN 1243
            +  +L++G +++F+
Sbjct: 752  LTAVLKYGAQKMFD 765


>gi|1597721|emb|CAA67494.1| putative helicase [Schizosaccharomyces pombe]
          Length = 1367

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 269/682 (39%), Positives = 394/682 (57%), Gaps = 64/682 (9%)

Query: 603  AQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAK---YG-------T 651
            AQ  G   SY++L+KW   S++HN+W   S L  V   +K++NY  +   Y        T
Sbjct: 221  AQDDGPKSSYQYLIKWQEVSHLHNTWEDYSTLSSVRGYKKVDNYIKQNIIYDREIREDPT 280

Query: 652  TVI-------------NICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLD 698
            T               N+  E +K  +R+++  ++++G  E FVKW  LPYD CTWE  D
Sbjct: 281  TTFEDIEALDIERERKNMLFEEYKIVERIVASETNEEGKTEYFVKWRQLPYDNCTWEDSD 340

Query: 699  EPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFP 758
                  YS   +   QF    L+++ S     +G     +     L +QP  +KGG +  
Sbjct: 341  VI----YSMAPNEVYQF----LQRENSPYLPYKGVFYNTRPPYRKLEKQPSYMKGGEIRD 392

Query: 759  HQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
             QL  +NW+   WH+++N ILADEMGLGKTV    F+S L    K   P L++VPLST+P
Sbjct: 393  FQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVPLSTVP 452

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
             W    A W P+LN + Y G  ++RAI+          +++N +    KFN+LLTTYE I
Sbjct: 453  AWQETLANWTPDLNSICYTGNTESRAIL----------ESMNSR--KLKFNILLTTYEYI 500

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            L D   L  + W+ L +DE HRLKNS S L+  L+ F   +R+L+TGTPLQNN+ E+ +L
Sbjct: 501  LKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNNLKELASL 560

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            +NFL P  F           +    + + +L++ + P +LRRLKKD  +++P K+ER++ 
Sbjct: 561  VNFLMPGKFYIRDELNFDQPNAEQERDIRDLQERLQPFILRRLKKDVEKSLPSKSERILR 620

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT-EPDSG 1057
            VELS +Q E+Y+ +LTKNY+ L     G  Q S+LNIV++L+KV NHPYL PG  E    
Sbjct: 621  VELSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLNIVVELKKVSNHPYLFPGAAEKWMM 680

Query: 1058 SVEFLHEMRIKA----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
              +   E  ++     S K+ LL  +L+ L  +GHRVLIFSQM ++L+IL +Y+++    
Sbjct: 681  GRKMTREDTLRGIIMNSGKMVLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLR--G 738

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              Y+R+DG++    R+ +I  FN  D   FVFLLSTR+ GLGINL TADTVII+DSD+NP
Sbjct: 739  YNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNP 798

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQK---- 1228
             AD+QAM RAHRIGQ   + VYR + + +VEE IL+ A++K++L+   ++   ++K    
Sbjct: 799  QADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARRKMILEYAIISLGVTEKSKNS 858

Query: 1229 --------EVEDILRWGTEELF 1242
                    E+  IL++G   +F
Sbjct: 859  KNDKYDAQELSAILKFGASNMF 880


>gi|341887543|gb|EGT43478.1| hypothetical protein CAEBREN_09271 [Caenorhabditis brenneri]
          Length = 1459

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 270/688 (39%), Positives = 400/688 (58%), Gaps = 85/688 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVL---AKRKLENYKAKYGTTVI--------------- 654
            +F VKW G S++HN+W  E+ L ++     +K++NY  K     +               
Sbjct: 242  QFFVKWTGWSHLHNTWESEASLTIMNAKGVKKVQNYVKKQKEVEMWKRSADKEYIEFYEC 301

Query: 655  ------NICDERWKQPQRVISLRSSKD------GTREAFVKWTGLPYDECTWEK---LDE 699
                   +C+E +K+ +RV++ ++S+D       T E  +KW+GLPY +CTWE    +D+
Sbjct: 302  EQQMAEELCEE-YKKVERVVAHQTSRDKAPDGSNTTEYLIKWSGLPYSDCTWEDEKMIDD 360

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---L 756
              +  Y H          + LK       + R     ++ +   L  QP+ L       L
Sbjct: 361  DLIRGYYHRI--------ENLKSPNKNAPVLR-----KRPKFEKLDAQPDYLMTNGDHKL 407

Query: 757  FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLST 816
              +QLE LNW+   W K  + ILADEMGLGKT+ + + ++SL+  ++   P LV+VPLST
Sbjct: 408  RDYQLEGLNWMIYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYELAGPYLVVVPLST 467

Query: 817  MPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYE 876
            M  W  EFA WAP++N+V Y G   +R +IRQYEW+          T   K N +LTTYE
Sbjct: 468  MAAWQKEFAQWAPDMNLVVYMGDVVSRDMIRQYEWYVGG-------TKKMKINAILTTYE 520

Query: 877  MILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMY 936
            ++L D + L  V W  L+VDE HRLKN  S L+  L  F F H++L+TGTPLQN++ E++
Sbjct: 521  ILLKDKAFLSSVDWAALLVDEAHRLKNDESLLYKCLTQFRFNHKLLITGTPLQNSLKELW 580

Query: 937  NLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERM 996
             LL+F+ P  F     FE   N+ +  + +  L K + P +LRR+KKD  +++PPKTE++
Sbjct: 581  ALLHFIMPEKFDCWEEFETAHNE-SNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQI 639

Query: 997  VPVELSSIQAEYYRAMLTKNYQILRNIGKGV--AQQSMLNIVMQLRKVCNHPYLIPGTEP 1054
            + V++++ Q ++Y+ +LTKNY   R + KGV  +    +N+VM+L+K CNH  L    + 
Sbjct: 640  LRVDMTAHQKQFYKWILTKNY---RELSKGVKGSINGFVNLVMELKKCCNHASLTRQYDH 696

Query: 1055 DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPK 1114
                 +   +  +K+S KL LL  +L  L  +GHRVLIFSQM  +LDIL++YL +   P 
Sbjct: 697  IYDDAQGRLQQLLKSSGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDILQEYLQLRRFPS 756

Query: 1115 TYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPH 1173
              +R+DGS+    R+ A+  +N   S  F FLLSTR+ GLGINLATADTVII+DSD+NP 
Sbjct: 757  --QRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQ 814

Query: 1174 ADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK---------- 1223
             D+QAM+RAHRIGQ+K + +YRLV + SVEE I++ AK+KL+LD L + +          
Sbjct: 815  NDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLS 874

Query: 1224 -----SGS----QKEVEDILRWGTEELF 1242
                 SGS    ++E+  IL++G  ELF
Sbjct: 875  KNATASGSVPFDKQELSAILKFGAVELF 902


>gi|301759851|ref|XP_002915762.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like
            [Ailuropoda melanoleuca]
 gi|281345480|gb|EFB21064.1| hypothetical protein PANDA_003773 [Ailuropoda melanoleuca]
          Length = 2995

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 298/738 (40%), Positives = 413/738 (55%), Gaps = 67/738 (9%)

Query: 539  TEDLGERNDKMVVEDADVSLRDNEGLTVSEIHITCESTDKDVDVGKKTSGSVAKRVQEPA 598
            TEDL  +      +DAD + RD+   T        ES D +  V +K   S + + Q+ +
Sbjct: 758  TEDLEFKISDEEADDADTAGRDSPSNTSQSEQ--QESVDAEGPVVEKIMSSRSVKKQKDS 815

Query: 599  VTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VI 654
              E    +       F VK+   S +H  W     L+     ++K++ +KAK G    + 
Sbjct: 816  GEEVEVEE-------FYVKYKTFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLS 868

Query: 655  NICDERWK----QPQRVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALE 703
             I DE +     +  R++    S D   E      VKW  LPY++ TWE    +D+  +E
Sbjct: 869  EIEDELFNPDYVEVDRIMDFARSTDERGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIE 928

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEA 763
            ++  L     + ER          E P    D ++SE        E      L  +QLE 
Sbjct: 929  EFEKLMSREPETERV---------ERPPAV-DWKKSESSR-----EYKNNNKLREYQLEG 973

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            +NWL   W+  +N ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  E
Sbjct: 974  VNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWERE 1032

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F  W   LNVV YHG   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D  
Sbjct: 1033 FRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCP 1090

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             LR +PW  +V+DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+
Sbjct: 1091 ELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLE 1150

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            P+ FPS ++F ++F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++
Sbjct: 1151 PSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTN 1210

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP--------- 1054
            IQ +YYRA+L KN+  L   G      ++LN +M+LRK CNHPYLI G E          
Sbjct: 1211 IQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKET 1270

Query: 1055 -DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
             ++ S +F  +  I+A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P
Sbjct: 1271 HNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP 1330

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              YER+DG V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP
Sbjct: 1331 --YERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP 1388

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG------ 1225
              D+QA  R HRIGQSK + +YRL+ R S E  +   A  KL LD+ +  + SG      
Sbjct: 1389 QNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRESATN 1448

Query: 1226 -----SQKEVEDILRWGT 1238
                 S+KE+ED+LR G 
Sbjct: 1449 GVQQLSKKEIEDLLRKGA 1466


>gi|66813908|ref|XP_641133.1| myb domain-containing protein [Dictyostelium discoideum AX4]
 gi|60469158|gb|EAL67154.1| myb domain-containing protein [Dictyostelium discoideum AX4]
          Length = 2373

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 267/649 (41%), Positives = 375/649 (57%), Gaps = 53/649 (8%)

Query: 613  EFLVKWVGKSNIHNSWI----------PESQLKVLAKRKLENYKAKYGTTVINICDERWK 662
            E LVKW   S IH+SWI           + +L+   ++ +EN        +++     W+
Sbjct: 357  EVLVKWKDLSYIHSSWINSKLMNQTRSSKMRLQRFIQKNIEN--EDNSDLLVSSTQPSWE 414

Query: 663  QPQ--------RVISLRSSK-DGTREAFVKWTGLPYDECTWEKLDEPA----LEKYSHLT 709
            +          R +S+ S+K    ++  +KW  + Y   TWE  D+      +E+Y  L 
Sbjct: 415  EFTEVEKVLDVRTVSVTSNKFKADKQYLIKWKSISYSLSTWEYQDDFKDDLKIEQYYKLN 474

Query: 710  DLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL-KGGALFPHQLEALNWLR 768
            ++             S++EL R K    ++    + + P+   KG  L P+QLE LNWL 
Sbjct: 475  EM------------PSKEEL-RDKPRPPRTAWKKIDQSPDYFTKGNKLRPYQLEGLNWLS 521

Query: 769  KCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWA 828
             CWH+ +N IL DEMGLGKTV + + + +L      + P LV+ PL+T+P+W  EF  W 
Sbjct: 522  FCWHEQRNSILGDEMGLGKTVQSVSILETLRKVHGIRGPFLVVAPLTTIPHWKREFENWT 581

Query: 829  PNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSY------KFNVLLTTYEMILADS 882
             ++N + YH     R I R YE++  D D      S        KFNVL+TTYEM + D 
Sbjct: 582  -DMNALVYHDSGAGRPICRNYEFYLKDKDGGGGGASGGASGKITKFNVLITTYEMAITDR 640

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            +HL  +PW+ LV+DE HRLKN   KL   L S+SF H +LLTGTPLQNN  E+++LLNFL
Sbjct: 641  THLSRIPWKYLVIDEAHRLKNKSCKLTIELRSYSFDHLLLLTGTPLQNNTQELWSLLNFL 700

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F +L  F  ++ DL  + +VE L+ ++ P++LRR+K+   ++I PK E +V VEL+
Sbjct: 701  DPKQFSNLDQFLLEYGDLKESSQVESLQAILKPYLLRRMKERVEKSIAPKEETIVEVELT 760

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSV--- 1059
            ++Q +YYRA+  KN+  LR  GK     S+LNI+M+LRK CNHPYL  G E    S    
Sbjct: 761  TVQKKYYRAIYEKNFSFLRKGGKSNQGPSLLNIMMELRKCCNHPYLTKGVEQSETSSIKD 820

Query: 1060 -EFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
             + + +  I+AS KL L+  +L  L    H+VLIFSQM  +LDIL+DYL     P  +ER
Sbjct: 821  KDQIFQKLIQASGKLVLIDKLLPKLKLGNHKVLIFSQMVSVLDILDDYLTYRGYP--HER 878

Query: 1119 VDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DGS+   DRQAAI RF++ D  RFVFLL TR+ G+GINL  ADTVII+DSD+NP  D+Q
Sbjct: 879  IDGSIKGNDRQAAIDRFSKPDSDRFVFLLCTRAGGIGINLTAADTVIIFDSDWNPQNDLQ 938

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS 1226
            A  R HRIGQ K + VYRLV + + E  +   A KKL LD+  + K  S
Sbjct: 939  AQARCHRIGQDKMVKVYRLVTKNTYERLMFDKASKKLGLDRAVLTKMNS 987


>gi|356554106|ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1764

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 287/691 (41%), Positives = 410/691 (59%), Gaps = 82/691 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK-RKLENYKAK------YGTTV----INICD--- 658
            EFL+KW G+S++H  W   ++L+ L+  +K+ NY  K      Y  T+    I + D   
Sbjct: 470  EFLIKWKGQSHLHCLWKSFAELQNLSGFKKVLNYTKKIMEDIRYRRTISREEIEVNDVSK 529

Query: 659  -------ERWKQPQRVISLRSSKDGTR----EAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                   ++  Q +RVI+ R SKD +     E  VKW GL Y E TWEK           
Sbjct: 530  EMDLDIIKQNSQVERVIADRISKDNSGNVIPEYLVKWQGLSYAEATWEK----------- 578

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKG---DCQQSEIVA----LTEQPEELKGGALFPHQ 760
              D+ + F + T+ +  + +     +G   D Q+ +  A    L EQPE LKGG L  +Q
Sbjct: 579  --DIDIAFAQHTIDEYKAREAAMAVQGKMVDSQRKKSKASLRKLEEQPEWLKGGKLRDYQ 636

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            LE LN+L   W    NVILADEMGLGKTV + + +  L    +   P LV+VPLST+ NW
Sbjct: 637  LEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNW 696

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
              EF  W P++N++ Y G   +R + +QYE++     N  K     KFN LLTTYE++L 
Sbjct: 697  AKEFRKWLPDMNIIIYVGTRASREVCQQYEFY-----NEKKPGKPIKFNALLTTYEVVLK 751

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D + L  + W  L+VDE HRLKNS ++L++ L+ FS ++++L+TGTPLQN++ E++ LL+
Sbjct: 752  DKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLH 811

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            FL P  F S   F + + +L++  + E   L   + PH+LRR+ KD  +++PPK ER++ 
Sbjct: 812  FLDPDKFRSKDEFVQNYKNLSSFNENELANLHMELRPHILRRVIKDVEKSLPPKIERILR 871

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHPYLIP----GT 1052
            VE+S +Q +YY+ +L +N+    N+ KGV   Q S+LNIV++L+K CNHP+L      G 
Sbjct: 872  VEMSPLQKQYYKWILERNFH---NLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGY 928

Query: 1053 EPDSGSVEFLHEMRIK-ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEF 1111
              DSGS +     RI  +S KL +L  +L  L++  HRVLIFSQM ++LDIL +Y+++  
Sbjct: 929  GGDSGSSDNSKLERIVFSSGKLVILDKLLVKLHETKHRVLIFSQMVRMLDILGEYMSLR- 987

Query: 1112 GPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDF 1170
                ++R+DGS     RQ A+  FN   S  F FLLSTR+ GLGINLATADTVII+DSD+
Sbjct: 988  -GFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDW 1046

Query: 1171 NPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN-------- 1222
            NP  D+QAM+RAHRIGQ + + +YR V   SVEE IL+ AKKK++LD L +         
Sbjct: 1047 NPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRL 1106

Query: 1223 ------KSGS---QKEVEDILRWGTEELFND 1244
                  K GS   + E+  ILR+G EELF +
Sbjct: 1107 EKKEAKKGGSYFDKNELSAILRFGAEELFKE 1137


>gi|328861599|gb|EGG10702.1| hypothetical protein MELLADRAFT_22404 [Melampsora larici-populina
            98AG31]
          Length = 1154

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 275/667 (41%), Positives = 394/667 (59%), Gaps = 58/667 (8%)

Query: 612  YEFLVKWVG----KSNIHNSWIPESQLKV---LAKRKLENYKAKYGTTVINICDERWKQP 664
            YEF   + G    ++ I N+W+PE+ ++         LE +  +   T   +  E +K  
Sbjct: 16   YEFAKSYRGFKKLENYIKNTWMPENMIRTDPRFTAEDLEAFMIERNRTREQV--EGYKIV 73

Query: 665  QRVISLRSSKDGTR------EAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQ-FER 717
            +RVI+ R +           +   KW GL YD CTWE  D     +  +  +  VQ +  
Sbjct: 74   ERVIAERDAAPTLDVPYDHVDYLCKWKGLNYDACTWEDHD-----RIVNSAEAEVQAYHT 128

Query: 718  QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK-GGALFPHQLEALNWLRKCWHKSKN 776
            +T  K       P G+    +     + E+P+ +K GG L   Q+  LNWL   WHK +N
Sbjct: 129  RTQSKTVPYRSTPIGR---TRPAFNPIKEEPKYIKVGGTLKDFQVTGLNWLAYVWHKGQN 185

Query: 777  VILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
             ILADEMGLGKTV  CAF+S L+   +   P LV+VPLST+P W  + A WAP+LNVV Y
Sbjct: 186  GILADEMGLGKTVQTCAFLSYLFHTMEQYGPFLVVVPLSTLPAWQMQCAQWAPDLNVVAY 245

Query: 837  HGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVD 896
             G   +R  IR+YE+  S            KFNVLLTTYE+IL D + L  + W+ L VD
Sbjct: 246  IGNKSSRKTIREYEFGPS---------KKIKFNVLLTTYEIILKDRADLSHIKWQYLAVD 296

Query: 897  EGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEK 956
            E HRLK+S S+L+  L SF+ Q ++L+TGTPLQNN+ E+  L++FLQP  F  LS     
Sbjct: 297  EAHRLKSSESQLYEALMSFNIQAKLLITGTPLQNNVKELLALMHFLQPDKF-DLSEGHFD 355

Query: 957  FNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKN 1016
              D    +K+++L   +   MLRRLKKD +Q++P K+ER++ VE+S +Q  +Y+A+LTKN
Sbjct: 356  LEDEEKERKIKDLHTKLQSIMLRRLKKDVVQSLPTKSERILRVEMSEMQMYWYKAILTKN 415

Query: 1017 YQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLL 1076
            Y +L +     +Q S+LN+ M+L+K  NHP+L PG EP + + E   +  +  S K+ LL
Sbjct: 416  YALLASTD---SQVSLLNVAMELKKASNHPFLFPGAEPKTDTKETTLKGLVVNSGKMILL 472

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              +L  L  EGHRVLIFSQM ++LDI+ DY+++      ++R+DG+V+  +R+ AI  FN
Sbjct: 473  DKLLTRLKAEGHRVLIFSQMVRMLDIMSDYMSLR--GYIFQRLDGTVASEERRKAIGHFN 530

Query: 1137 Q-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
              D   F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM RAHRIGQ   + VYR
Sbjct: 531  APDSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKNHVNVYR 590

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFVNK---SG--------------SQKEVEDILRWGT 1238
            LV + +VEE +L+ AK+K++L+   +N+   SG              +++++  IL++G 
Sbjct: 591  LVTKDTVEEDVLERAKRKMILEYAIINQMDTSGKNVGKKEAPKTQQFNKEDLSAILKFGA 650

Query: 1239 EELFNDS 1245
              LF  S
Sbjct: 651  ANLFKSS 657


>gi|330796151|ref|XP_003286132.1| hypothetical protein DICPUDRAFT_150076 [Dictyostelium purpureum]
 gi|325083877|gb|EGC37318.1| hypothetical protein DICPUDRAFT_150076 [Dictyostelium purpureum]
          Length = 2186

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 293/745 (39%), Positives = 407/745 (54%), Gaps = 86/745 (11%)

Query: 517  EDDKDSDPVAVNGKVQDESAVSTEDLGERNDKMVVEDADVSLRDNEGLTVSEIHITCEST 576
            ED +D++  A N   +DE A+ + D  E  DK    D D                  +  
Sbjct: 269  EDYEDNESEA-NSNEEDEKAIDSSD--EEIDKFKQMDGD------------------QRV 307

Query: 577  DKDVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKV 636
             K+  + K  +    KRV +    E  QV         L+KW   S IH SW+   +L  
Sbjct: 308  QKEFSIDKILNKRYVKRVVDGIDEEVLQV---------LIKWKDLSYIHCSWVDADKLNQ 358

Query: 637  LAKRKLE-------------------------NYKAKYGTTVINICDERWKQPQRVISLR 671
                K+                          N+     T V  + +ER       +S  
Sbjct: 359  TKSSKMRLQRFIQKVDDEDDEDVEVVVELESGNFPWDDFTEVEKVLEER------TVSPS 412

Query: 672  SSK-DGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQ-FERQTLKKDASEDEL 729
            S+K    ++  +KW    Y + TWE  D+          D+ ++ F++Q      +++EL
Sbjct: 413  SNKYQADKQFLIKWKSQSYSQSTWEFKDD-------FKDDIKIELFQKQNTF--PTDEEL 463

Query: 730  PRG-KGDCQQSEIVALTEQPEE-LKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
                K     S+   LTE P   LKG  L P+QLE LNWLR CW   +N IL DEMGLGK
Sbjct: 464  ANANKPRPPASQWKELTESPSYFLKGNKLRPYQLEGLNWLRYCWFNQRNSILGDEMGLGK 523

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV + + + +L      + P LV+ PL+T+P+W  EF  W  ++N + YH     R I+R
Sbjct: 524  TVQSVSILETLRKAHDIRGPFLVVAPLTTIPHWKREFENWT-DMNSLVYHDTGAGRPILR 582

Query: 848  QYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSK 907
             YE++  D     K T+  KFNVL+TTYEM ++D S+L  + W+ LV+DE HRLKN   K
Sbjct: 583  NYEFYFKDKSG--KPTNVVKFNVLITTYEMAISDRSYLSKIKWKYLVIDEAHRLKNKQCK 640

Query: 908  LFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVE 967
            L S L ++ F H +LLTGTPLQNN  E++ LLNFL+P+ F  L+ F  +F DL   ++V 
Sbjct: 641  LTSELKTYHFDHLLLLTGTPLQNNTQELWALLNFLEPSKFNKLAEFLVEFGDLKQAEQVS 700

Query: 968  ELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGV 1027
            +L+ L+ P++LRR+K+   ++I PK E +V VEL+ +Q +YYRA+  KN+  LR   KG 
Sbjct: 701  KLQNLLKPYLLRRMKERVEKSIAPKEETIVEVELTMVQKKYYRAIYEKNFAFLRKNCKGQ 760

Query: 1028 AQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF-----LHEMRIKASAKLTLLHSMLKV 1082
               S+LNI+M+LRK CNHPYLI G E  S + E      ++   I+AS KL L+  +L  
Sbjct: 761  QGPSLLNIMMELRKCCNHPYLIKGVE-HSETNEISEKDEVYTKLIQASGKLVLVDKLLPK 819

Query: 1083 LYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSR 1141
            L   GH+VLIFSQM  +LDIL+DYL     P  +ER+DGS+   DRQAAI RF++ D  R
Sbjct: 820  LKAGGHKVLIFSQMVSVLDILDDYLTFRGYP--HERIDGSIKGNDRQAAIDRFSKPDSDR 877

Query: 1142 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRAS 1201
            FVFLL TR+ G+GINL  ADTVII+DSD+NP  D+QA  R HRIGQ K + VYRLV + +
Sbjct: 878  FVFLLCTRAGGIGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVYRLVTKNT 937

Query: 1202 VEERILQLAKKKLMLDQLFVNKSGS 1226
             E  +   A KKL LD++ + K  S
Sbjct: 938  YERLMFDRASKKLGLDRVVLTKMNS 962


>gi|355678659|gb|AER96176.1| chromodomain helicase DNA binding protein 2 [Mustela putorius furo]
          Length = 1027

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 288/719 (40%), Positives = 411/719 (57%), Gaps = 88/719 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 295  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 354

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 355  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 414

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+    D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 415  SWE--DEALIGKKFQSCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 466

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 467  GGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 526

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 527  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 579

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 580  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQ 639

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFND-LTTTQKVEELKKLVAPHMLRRLKKDAMQN 988
            N++ E+++LL+F+ P  F     FEE          +   + K++ P +LRR+KKD  ++
Sbjct: 640  NSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHIHKVLEPFLLRRVKKDVEKS 699

Query: 989  IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYL 1048
            +P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YL
Sbjct: 700  LPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYL 758

Query: 1049 I--PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDY 1106
            I  P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +Y
Sbjct: 759  IKPPEENERENGQEVLLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEY 817

Query: 1107 LNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVII 1165
            L I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I
Sbjct: 818  LTIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVI 875

Query: 1166 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---- 1221
            +DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +    
Sbjct: 876  FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMD 935

Query: 1222 --------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                    N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 936  TTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 991


>gi|344284165|ref|XP_003413840.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Loxodonta
            africana]
          Length = 1902

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 286/717 (39%), Positives = 413/717 (57%), Gaps = 86/717 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 398  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLEKVSPEDVEYFNC 457

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   R+I++++SK                     E   KW GLPY EC
Sbjct: 458  QQELASELNKQYQIVERIIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 517

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+    D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 518  SWE--DEALIGKKFQSCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPTYL 569

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 570  GGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 629

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   +FN
Sbjct: 630  IVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLRFN 682

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 683  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 742

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 743  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 801

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 802  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 860

Query: 1050 -PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
             P  E +  + + +    I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL 
Sbjct: 861  KPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLT 920

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYD 1167
            I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+D
Sbjct: 921  IKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFD 978

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------ 1221
            SD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +      
Sbjct: 979  SDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTT 1038

Query: 1222 ------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                  N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 1039 GRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 1092


>gi|348557269|ref|XP_003464442.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like [Cavia
            porcellus]
          Length = 2996

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 277/663 (41%), Positives = 388/663 (58%), Gaps = 58/663 (8%)

Query: 614  FLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W  I + +     ++K++ +KAK G    +  I DE +     +  
Sbjct: 826  FYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEID 885

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  ++++  L     + ER 
Sbjct: 886  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIDEFEKLMSREPETER- 944

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             +++  ++D         ++SE        E      L  +QLE +NWL   W+  +N I
Sbjct: 945  -VERPPADD--------WKKSESSR-----EYRNNNKLREYQLEGVNWLLFNWYNMRNCI 990

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YHG
Sbjct: 991  LADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHG 1048

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE 
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEA 1107

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F 
Sbjct: 1108 HRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFG 1167

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 1168 DLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFT 1227

Query: 1019 ILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIK 1068
             L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I+
Sbjct: 1228 FLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQ 1287

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    R
Sbjct: 1288 AAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNLR 1345

Query: 1129 QAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            QAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ
Sbjct: 1346 QAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ 1405

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDILR 1235
            SK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+LR
Sbjct: 1406 SKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLR 1465

Query: 1236 WGT 1238
             G 
Sbjct: 1466 KGA 1468


>gi|45201219|ref|NP_986789.1| AGR123Cp [Ashbya gossypii ATCC 10895]
 gi|44986073|gb|AAS54613.1| AGR123Cp [Ashbya gossypii ATCC 10895]
 gi|374110038|gb|AEY98943.1| FAGR123Cp [Ashbya gossypii FDAG1]
          Length = 1422

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 293/687 (42%), Positives = 399/687 (58%), Gaps = 74/687 (10%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY-----------GTTVINI--- 656
            YEFL+KW  +S+IHN+W   ES   V   +K++NY  +Y            TT  +I   
Sbjct: 191  YEFLIKWNNESHIHNTWETAESLGNVRGVKKVDNYIKQYILLDHELRTDKYTTREDIEVM 250

Query: 657  -------CDE--RWKQPQRVI-SLRSS-KDGTRE--AFVKWTGLPYDECTWEKLDEPALE 703
                   CDE   +K+ +R+I S R +  DG+ +    VKW  L YDE TWE        
Sbjct: 251  DLEHERRCDEFEEFKKVERIIDSDRVTLDDGSSQLQYLVKWKRLNYDEATWEN------- 303

Query: 704  KYSHLTDLFVQFERQTLKKDASEDE---LPRGKGD--CQQSEIVALTEQPEELKGGALFP 758
                   + V+   + +K+  S      LP+   +   Q+     L+ QP  +KGG L  
Sbjct: 304  -----ASVIVKMAPEEVKRFQSRSSSKILPQHSSNYGSQRPGFEKLSVQPSFIKGGELRD 358

Query: 759  HQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
             QL  +NW+   W KS N ILADEMGLGKTV   +FIS L    +   P LV+VPLSTMP
Sbjct: 359  FQLTGINWMAFLWSKSDNGILADEMGLGKTVQTVSFISWLIFARRQNGPHLVVVPLSTMP 418

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
             W   F  WAP LN V Y G  K+R +IR+YE++ ++P    KK  + KFNVLLTTYE I
Sbjct: 419  AWQETFEKWAPELNCVYYMGNQKSRDVIREYEFY-TNPHTKGKK--NIKFNVLLTTYEYI 475

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            L D   L  + W+ L VDE HRLKN+ S L+  L+SF   +R+L+TGTPLQNNI E+  L
Sbjct: 476  LKDRLELGAIKWQFLAVDEAHRLKNAESSLYESLSSFKVANRMLITGTPLQNNIKELAAL 535

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            +NFL P  F      + +  D      + +L K + P++LRRLKKD  +++P KTER++ 
Sbjct: 536  VNFLMPGKFTIDQEIDFENQDEKQENYIRDLHKRLQPYILRRLKKDVEKSLPSKTERILR 595

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE----- 1053
            VELS +Q EYY+ +LTKNY  L    KG    S+LNI+ +L+K  NHPYL    E     
Sbjct: 596  VELSDVQTEYYKNILTKNYNALTAGTKGT-HFSLLNIMNELKKASNHPYLFGNAENRVLA 654

Query: 1054 ---PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIE 1110
                 + S E +    I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I+
Sbjct: 655  KFGDGNRSRENILRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIK 714

Query: 1111 FGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSD 1169
                 ++R+DG+V    R+ +I  FN  D + FVFLLSTR+ GLGINL TADTVII+DSD
Sbjct: 715  --GINFQRLDGTVPSSQRRISIDHFNAPDSNDFVFLLSTRAGGLGINLMTADTVIIFDSD 772

Query: 1170 FNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------N 1222
            +NP AD+QAM RAHRIGQ   ++VYR V + +VEE +L+ A+KK++L+   +       N
Sbjct: 773  WNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGN 832

Query: 1223 KSGSQK-------EVEDILRWGTEELF 1242
            K  S+        E+ +IL++G   +F
Sbjct: 833  KYTSKSKAEPSAGELSEILKFGAGNMF 859


>gi|358415368|ref|XP_612494.5| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Bos taurus]
          Length = 2940

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 278/663 (41%), Positives = 387/663 (58%), Gaps = 58/663 (8%)

Query: 614  FLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W  I + +     ++K++ +KAK G    +  I DE +     +  
Sbjct: 776  FYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 835

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L     + ER 
Sbjct: 836  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLMSREPETER- 894

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             +++  ++D         ++SE        E      L  +QLE +NWL   W+  +N I
Sbjct: 895  -VERPPADD--------WKKSESSR-----EYKNNNKLREYQLEGVNWLLFNWYNMRNCI 940

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YHG
Sbjct: 941  LADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHG 998

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE 
Sbjct: 999  SQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEA 1057

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P  FPS ++F ++F 
Sbjct: 1058 HRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSETTFMQEFG 1117

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 1118 DLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFA 1177

Query: 1019 ILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIK 1068
             L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I+
Sbjct: 1178 FLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQ 1237

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    R
Sbjct: 1238 AAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNLR 1295

Query: 1129 QAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            QAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ
Sbjct: 1296 QAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ 1355

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDILR 1235
            SK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+LR
Sbjct: 1356 SKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAPNGVQQLSKKEIEDLLR 1415

Query: 1236 WGT 1238
             G 
Sbjct: 1416 KGA 1418


>gi|359072380|ref|XP_002692716.2| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Bos taurus]
          Length = 2935

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 278/663 (41%), Positives = 387/663 (58%), Gaps = 58/663 (8%)

Query: 614  FLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W  I + +     ++K++ +KAK G    +  I DE +     +  
Sbjct: 771  FYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 830

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L     + ER 
Sbjct: 831  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLMSREPETER- 889

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             +++  ++D         ++SE        E      L  +QLE +NWL   W+  +N I
Sbjct: 890  -VERPPADD--------WKKSESSR-----EYKNNNKLREYQLEGVNWLLFNWYNMRNCI 935

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YHG
Sbjct: 936  LADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHG 993

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE 
Sbjct: 994  SQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEA 1052

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P  FPS ++F ++F 
Sbjct: 1053 HRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSETTFMQEFG 1112

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 1113 DLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFA 1172

Query: 1019 ILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIK 1068
             L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I+
Sbjct: 1173 FLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQ 1232

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    R
Sbjct: 1233 AAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNLR 1290

Query: 1129 QAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            QAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ
Sbjct: 1291 QAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ 1350

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDILR 1235
            SK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+LR
Sbjct: 1351 SKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAPNGVQQLSKKEIEDLLR 1410

Query: 1236 WGT 1238
             G 
Sbjct: 1411 KGA 1413


>gi|409045016|gb|EKM54497.1| hypothetical protein PHACADRAFT_258377 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1433

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 264/644 (40%), Positives = 376/644 (58%), Gaps = 80/644 (12%)

Query: 659  ERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE---------------PALE 703
            E +K  +R+I+ R + +   E FVKW  L YD CTWE  DE                A  
Sbjct: 285  ETYKTVERIIAQRENAENHVEYFVKWNNLNYDHCTWELQDEIRPIAKEQIDAFRTREAEA 344

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL--KGGALFPHQL 761
            K+ + + ++ +  R   KK                     +TE P+ L   GG L   QL
Sbjct: 345  KFPYKSAMYAKNSRPAFKK---------------------ITEDPQYLVKTGGELKDFQL 383

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
              LNWL   W   +N ILADEMGLGKTV + +F++ L+ E +   P LV+VPLST+  W 
Sbjct: 384  TGLNWLAYLWSNGENGILADEMGLGKTVQSVSFLAYLFHEMRQFGPFLVIVPLSTITAWQ 443

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
            ++FA W P+LNV+ Y G A AR +IR +E+  S     NKK    K NVLLTTYE+ L D
Sbjct: 444  SQFATWGPDLNVITYIGNANAREVIRTFEFGPS-----NKK---LKMNVLLTTYELTLRD 495

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
            +  L  + W+VL VDE HRLKNS S+L+  L +FS   +VL+TGTPLQNN+ E+ +L++F
Sbjct: 496  ARELSDIKWQVLAVDEAHRLKNSESQLYEALRAFSAASKVLITGTPLQNNVKELLSLMHF 555

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L P  F   + F+    D+   +K++EL K +   MLRRLKKD + ++P K+ER++ VE+
Sbjct: 556  LMPEKFHLSNEFD--LTDVDHEEKIKELHKQLEALMLRRLKKDVLTSLPTKSERILRVEM 613

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF 1061
            S++Q   Y+ +LTKN+Q L     G    S+LNI M+L+K  NHPYL  G EP+S + E 
Sbjct: 614  SALQTHLYKNILTKNFQGLIKSANGNTNISLLNIAMELKKAANHPYLFEGVEPESATSEE 673

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
            L +  +  S K+ LL  +L  L ++ HRVLIFSQM ++LD+L +Y+ +      ++R+DG
Sbjct: 674  LLKGLVMNSGKIVLLDKLLARLRQDSHRVLIFSQMVRMLDLLSEYMQLR--GYQFQRLDG 731

Query: 1122 SVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             VS   R+ +I  FN   S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM 
Sbjct: 732  MVSSEARKKSIAHFNAPGSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMA 791

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN-----------KSGSQK- 1228
            RAHRIGQ   + VYR V + ++EE +L+ AKKK++L+   +N           K+G+ K 
Sbjct: 792  RAHRIGQKSHVSVYRFVSKDTMEEDVLERAKKKMVLEYAIINQMDTSQAHLSSKAGATKE 851

Query: 1229 ----------EVEDILRWGTEELFNDSPGINGKDMGENNTSIEE 1262
                      E+  +L++G +++F+       KD  + N  ++E
Sbjct: 852  NTKPNDLSKDELHAVLKYGAQKIFD-------KDDSQQNQKLDE 888


>gi|223953572|gb|ACN30001.1| chromodomain helicase DNA-binding protein 7 [Vicugna vicugna]
          Length = 3000

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 277/664 (41%), Positives = 385/664 (57%), Gaps = 60/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 822  FYVKYKTFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 881

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L          
Sbjct: 882  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKL---------- 931

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             + ++   + + R   D  +      +E   E K    L  +QLE +NWL   W+  +N 
Sbjct: 932  -MSREPETERVERPPADDWKK-----SESSREYKNNNKLREYQLEGVNWLLFNWYNMRNC 985

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 986  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1043

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1044 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRSIPWRCVVIDE 1102

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F
Sbjct: 1103 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1162

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1163 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1222

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
              L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I
Sbjct: 1223 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMI 1282

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    
Sbjct: 1283 QAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNL 1340

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 1341 RQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1400

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDIL 1234
            QSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+L
Sbjct: 1401 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAPNGVQQLSKKEIEDLL 1460

Query: 1235 RWGT 1238
            R G 
Sbjct: 1461 RKGA 1464


>gi|296480623|tpg|DAA22738.1| TPA: kismet-like [Bos taurus]
          Length = 2935

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 278/663 (41%), Positives = 387/663 (58%), Gaps = 58/663 (8%)

Query: 614  FLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W  I + +     ++K++ +KAK G    +  I DE +     +  
Sbjct: 771  FYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 830

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L     + ER 
Sbjct: 831  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLMSREPETER- 889

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             +++  ++D         ++SE        E      L  +QLE +NWL   W+  +N I
Sbjct: 890  -VERPPADD--------WKKSESSR-----EYKNNNKLREYQLEGVNWLLFNWYNMRNCI 935

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YHG
Sbjct: 936  LADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHG 993

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE 
Sbjct: 994  SQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEA 1052

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P  FPS ++F ++F 
Sbjct: 1053 HRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSETTFMQEFG 1112

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 1113 DLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFA 1172

Query: 1019 ILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIK 1068
             L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I+
Sbjct: 1173 FLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQ 1232

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    R
Sbjct: 1233 AAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNLR 1290

Query: 1129 QAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            QAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ
Sbjct: 1291 QAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ 1350

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDILR 1235
            SK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+LR
Sbjct: 1351 SKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAPNGVQQLSKKEIEDLLR 1410

Query: 1236 WGT 1238
             G 
Sbjct: 1411 KGA 1413


>gi|158296578|ref|XP_316961.4| AGAP008482-PA [Anopheles gambiae str. PEST]
 gi|157014777|gb|EAA12280.5| AGAP008482-PA [Anopheles gambiae str. PEST]
          Length = 4793

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 283/707 (40%), Positives = 397/707 (56%), Gaps = 68/707 (9%)

Query: 574  ESTDKDVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSY---EFLVKWVGKSNIHNSWIP 630
            ESTD+      K+S +V K   E A TE+ + K + V     E+ VK+   S +H  W  
Sbjct: 1671 ESTDE------KSSEAVKKEEGESASTETDEKKPEPVYIDVEEYFVKYRNFSYLHCEWRT 1724

Query: 631  ESQLKVLAKR---KLENY--KAKYGTTVINICDERWKQPQ-----RVISLRSSKDG---- 676
            E +L    KR   K++ +  K +    +    DE    P      RV+ +    D     
Sbjct: 1725 EDELLKGDKRVGNKIKRFLMKQQQQLNIFESLDEEPFNPDFVEVDRVLDVSELVDDEGKT 1784

Query: 677  TREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGK 733
             +   VKW  LPY++ TWE    +D+  +E+Y     +  + E +T K+   +       
Sbjct: 1785 VKHYLVKWKSLPYEDSTWELEDDVDQLKIEQYYKFNKIPPKSEWKTKKRPHPD------- 1837

Query: 734  GDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACA 793
                  +  AL E P    G  L P+QLE LNWLR  W+K  N ILADEMGLGKT+ +  
Sbjct: 1838 ------QWKALPESPTFKGGNKLRPYQLEGLNWLRYSWYKGNNCILADEMGLGKTIQSLT 1891

Query: 794  FISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHA 853
            F++S+Y E+  + P LV+ PLST+PNW  EF  W   +NV+ YHG A +R +I+ YE H 
Sbjct: 1892 FVNSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWT-EMNVIVYHGSATSRQMIQDYEVHY 1949

Query: 854  -SDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLL 912
             ++   L +  +  KFNVL+TT+EMI+ D   L+   W   V+DE HRLKN   KL   L
Sbjct: 1950 RTETGKLIRDIT--KFNVLITTFEMIVTDYQDLKNFTWRACVIDEAHRLKNRNCKLLEGL 2007

Query: 913  NSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKL 972
               + +HRVLL+GTPLQNN+ E+++LLNFL+P+ F     F  +F  L T  +V +L+ L
Sbjct: 2008 RQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPSQFACSEEFLREFGSLKTESEVLKLQAL 2067

Query: 973  VAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSM 1032
            + P MLRRLK D  +++ PK E +V VEL++IQ +YYR +L +N+  L          ++
Sbjct: 2068 LKPMMLRRLKDDVEKSLAPKEETIVEVELTNIQKKYYRGILEQNFSFLMKGTTSANIPNL 2127

Query: 1033 LNIVMQLRKVCNHPYLIPGTEPD---------SGSVEFLHEMRIKASAKLTLLHSMLKVL 1083
            +N +M+LRK C HPYL+ G E               E  ++  I +S K+ L+  +L  L
Sbjct: 2128 MNTMMELRKCCIHPYLLNGAEDQIQYDYRQQHGEDAESYYKNLIVSSGKMVLIDKLLPKL 2187

Query: 1084 YKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRF 1142
               GHRVLIFSQM + LDILEDYL  +  P  +ER+DG +    RQAAI R+++ D  RF
Sbjct: 2188 RANGHRVLIFSQMVRCLDILEDYLMYKKYP--FERIDGRIRGNLRQAAIDRYSKPDSDRF 2245

Query: 1143 VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASV 1202
            VFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  R HRIGQ K + +YRL+ R + 
Sbjct: 2246 VFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQQKMVKIYRLLCRNTY 2305

Query: 1203 EERILQLAKKKLMLDQLFV-------NKSGSQ-----KEVEDILRWG 1237
            E  +   A  KL LD+  +       NK G+Q     KE+ED+L+ G
Sbjct: 2306 EREMFDKASLKLGLDKAVLQSMNTGQNKDGTQRQLSKKEIEDLLKKG 2352


>gi|213404262|ref|XP_002172903.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces japonicus
            yFS275]
 gi|212000950|gb|EEB06610.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces japonicus
            yFS275]
          Length = 1356

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 278/737 (37%), Positives = 415/737 (56%), Gaps = 72/737 (9%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENY-----------KAKYGTT-----VI 654
            +EFL+KW  KS +H +W   E   +    +K++NY           ++   TT      +
Sbjct: 211  FEFLIKWQDKSYLHCTWETREDMSETKGVKKIDNYTKTNIILDKEIRSDPTTTREDIEAM 270

Query: 655  NICDERWKQP-------QRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
            +I  ER K+         R+++    ++  R   VKW  L YD CTWE            
Sbjct: 271  DIERERKKEAYEEHKSVDRIVAEDFDENRNRIFLVKWKQLFYDACTWET---------EE 321

Query: 708  LTDLFVQFERQTLKKDASEDELP-RGK--GDCQQSEIVALTEQPEELKGGALFPHQLEAL 764
            L     Q E +  +K  +    P RG   G+ + +    L +QP  + GG L   QL  +
Sbjct: 322  LISRVAQDEIEEYQKRVNSALSPARGTNYGNSRPT-YRKLEQQPSYISGGELRDFQLTGV 380

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NW+   WHK++N ILADEMGLGKTV   AF+S L    +   P LV+VPLST+P W    
Sbjct: 381  NWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLRQHGPFLVVVPLSTVPAWQETL 440

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
            A WAP++N + Y G AK+R +I+++E++       +++T   KFNVLLTTYE +L D + 
Sbjct: 441  AAWAPDMNCISYLGNAKSRQMIQEHEFY-------DERTQKLKFNVLLTTYEYVLKDRAS 493

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L  + W+ + +DE HRLKNS S L+  L+ F   +R+L+TGTPLQNNI E+  L++FL P
Sbjct: 494  LNNIKWQYMAIDEAHRLKNSESSLYETLSQFKNANRLLITGTPLQNNIKELAALVDFLMP 553

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F        +  D      +  L++ + P++LRRLKKD  +++P K+ER++ VELS  
Sbjct: 554  GKFQIREEINFEAPDEEQESYIRNLQQHLQPYILRRLKKDVEKSLPSKSERILRVELSDS 613

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP-------DSG 1057
            Q  +Y+ +LT+NY++L       +Q S+LNIVM+L+K  NHPYL PG E          G
Sbjct: 614  QTYWYKNILTRNYRVLSQSTSNGSQLSLLNIVMELKKASNHPYLFPGVEETWLKKTGGEG 673

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
              E L +  I  S K+ LL  +L  L+++GHRVLIFSQM ++LDIL DY+++   P  ++
Sbjct: 674  KREELLKGLIMNSGKMVLLDKLLTRLHRDGHRVLIFSQMVRMLDILGDYMSLRGYP--FQ 731

Query: 1118 RVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG+V    R+ +I  FN   S  FVFLLSTR+ GLGINL TADTVII+DSD+NP AD+
Sbjct: 732  RLDGTVPAATRRISIDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADL 791

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKS 1224
            QAM RAHRIGQ   ++VYR + + ++EE +L+ A++K++L+   +            +  
Sbjct: 792  QAMARAHRIGQKNHVMVYRFLSKDTIEEDVLERARRKMILEYAIISLGVTDKRKNSKSDK 851

Query: 1225 GSQKEVEDILRWGTEELFNDSPGINGKDMGENNT-SIEEAVRDLEQKHRKRGGGLGD--- 1280
             S +E+  IL++G   +F ++   N K + + N   I E   D +  +   G  +G    
Sbjct: 852  FSAEELSAILKFGASNMFKNND--NQKKLEDLNLDEILEHAEDHDTSNDVGGASMGGEEF 909

Query: 1281 VYQDKCTEGSTKIVWDE 1297
            + Q + T+    + WD+
Sbjct: 910  LKQFEVTDYKANVSWDD 926


>gi|354544114|emb|CCE40836.1| hypothetical protein CPAR2_108750 [Candida parapsilosis]
          Length = 1403

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 283/725 (39%), Positives = 400/725 (55%), Gaps = 83/725 (11%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAK---YGTTVIN---------- 655
            + Y F +KW   S++HN+W   + LK     RK++NY  +   Y   V N          
Sbjct: 187  LDYLFKIKWTDASHLHNTWETYNDLKEFKGFRKVDNYIKQFIIYDNEVRNDPLTTKEDIE 246

Query: 656  ----------ICDERWKQPQRVI-SLRSSKDGTR--EAFVKWTGLPYDECTWEKLDEPAL 702
                         E +   +R++ S R+ KDG    E FVKW  L YDEC+WE  +E A 
Sbjct: 247  AMDIERERRRDEQEEYVHVERIVDSQRTEKDGESRLEYFVKWRRLYYDECSWEDAEEIAK 306

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLE 762
                 ++    +   + L   ++   L       Q+     L +QP  +K G L   QL 
Sbjct: 307  IAPEQVSKYQQRLNSKILPNFSANYPL------SQRPRFEKLVKQPVFIKNGELRDFQLT 360

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNW+   W +++N ILADEMGLGKTV   AF+S L    +   P LV+VPLST+P W  
Sbjct: 361  GLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHLVVVPLSTIPAWQE 420

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
             F  W+P++N + Y G  +AR  IR YEW+  +           KFNVLLTTYE IL D 
Sbjct: 421  TFEKWSPDINCIYYLGNGEARRTIRDYEWYTPN--------GKPKFNVLLTTYEYILKDR 472

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L  + W+ L VDE HRLKN+ S L+  L SF   +R+L+TGTPLQNN+ E+  L NFL
Sbjct: 473  AELGSLKWQFLAVDEAHRLKNADSSLYESLKSFRCANRLLITGTPLQNNLKELAALCNFL 532

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F      + +  D      +++L+K + P++LRRLKKD   ++P KTER++ VELS
Sbjct: 533  MPGKFDIEQEIDFETPDEEQEMYIKDLQKKIKPYILRRLKKDVETSLPSKTERILRVELS 592

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE------PDS 1056
             IQ +YY+ ++TKNY  L N G   +Q S+LN++ +L+K  NHPYL  G E        S
Sbjct: 593  DIQTDYYKNIITKNYAAL-NAGNKGSQISLLNVMSELKKASNHPYLFDGAEERVLARAGS 651

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
             + E + +  I +S K+ LL  +L  L KEGHRVL+FSQM ++LDIL DY++I+     +
Sbjct: 652  HTRENILKGMIMSSGKMVLLEQLLSRLKKEGHRVLVFSQMVRMLDILGDYMSIK--GYQF 709

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            +R+DG +    R+ +I  FN   S+ F FLLSTR+ GLGINL TADTVII+DSD+NP AD
Sbjct: 710  QRLDGGIPSAQRRISIDHFNAPDSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQAD 769

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQK 1228
            +QAM RAHRIGQ   + VYR V + +VEE+IL+ A+KK++L+   +       N   S K
Sbjct: 770  LQAMARAHRIGQKNHVSVYRFVSKDTVEEQILERARKKMILEYAIISLGITDPNAKKSSK 829

Query: 1229 ------EVEDILRWGTEELFNDSPG-------------------INGKDMGENNTSIEEA 1263
                  E+  IL++G   +F D+                     +   ++GE+N   EE 
Sbjct: 830  TEPSTSELSQILKFGASTMFKDNDNQQKLENLNLDEVLNHAEDHVTTPELGESNLGSEEF 889

Query: 1264 VRDLE 1268
            ++  E
Sbjct: 890  LKQFE 894


>gi|347837698|emb|CCD52270.1| similar to chromodomain helicase (Chd1) [Botryotinia fuckeliana]
          Length = 1531

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 272/651 (41%), Positives = 381/651 (58%), Gaps = 48/651 (7%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAK------YGTTVINIC---DERW 661
            +E+ +KW GKS+ H +W   S L  V   R+LENY  K      Y T    I     E+W
Sbjct: 305  FEYYIKWQGKSHCHATWETTSSLAGVRGFRRLENYYRKIVIDDIYMTQGAEIPPEEKEKW 364

Query: 662  K--------------QPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                           + +RVI  R   + T E F+KW  L Y+ CTWE     + EK   
Sbjct: 365  MLDRERDADALEDYIKVERVIGSREGDEET-EYFIKWKALYYESCTWETASFIS-EKAQD 422

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    ++L  D  E           +S  V + EQP+ +  G L   Q+  LN+L
Sbjct: 423  AIDHFLDRSSRSLVSDRKE------SNPDTRSPHVPIREQPDYIMNGQLRDFQITGLNFL 476

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K+KNVILADEMGLGKTV   AF++ L+ +   + P LV+VPL+T+P W   F  W
Sbjct: 477  AYNWCKNKNVILADEMGLGKTVQTVAFMNWLHNDRGQEGPHLVVVPLTTIPAWADTFDNW 536

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            AP+LN V Y+G   +R IIR+YE        ++      KFNVLLT+YE ILADS  L  
Sbjct: 537  APSLNYVVYNGKESSRQIIREYELL------VDGNPKRPKFNVLLTSYEYILADSLFLSQ 590

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ + VDE HRLKN  S+L+  L  F    R+L+TGTP+QN +GE+  L++FL P   
Sbjct: 591  IKWQFMAVDEAHRLKNRESQLYLKLLDFKAPSRLLITGTPVQNTLGELSALMDFLMPGEL 650

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
                + +    D    +K+  L   + P++LRR K+    ++PPK+E+++ VELS +Q +
Sbjct: 651  EIEDNMD--LTDEAAGEKIAALTTKIQPYILRRTKQKVENDLPPKSEKIIRVELSDVQLD 708

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFLHEM 1065
            YY+ +LT+NY  L    KG  +QS+LNI+M+L+K  NHPY+ P  E     GS     ++
Sbjct: 709  YYKNILTRNYAALNEGSKG-PKQSLLNIMMELKKASNHPYMFPNAEEKILKGSERRDDQL 767

Query: 1066 R--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
            +  I +S K+ LL  +L  L K+ HRVLIFSQM K+LDIL DYL +      ++R+DG+V
Sbjct: 768  KGLIASSGKMMLLDRLLAKLKKDNHRVLIFSQMVKMLDILGDYLQLR--GYQFQRLDGTV 825

Query: 1124 SVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
            + G R+ AI  FN D S  F FLLSTR+ GLGINL TADTV+I+DSD+NP AD+QAM RA
Sbjct: 826  AAGPRRQAIDHFNADGSNDFCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARA 885

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            HRIGQ K + +YR V + +VEE IL+ A+ KLML+ + + +  + KE +++
Sbjct: 886  HRIGQKKPVSIYRFVSKETVEEEILERARNKLMLEFITIQRGVTDKEKKEL 936


>gi|426236111|ref|XP_004012018.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 7 [Ovis aries]
          Length = 2867

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 278/663 (41%), Positives = 386/663 (58%), Gaps = 58/663 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT--VINICDERWK----QPQ 665
            F VK+   S +H  W     L+     ++K++ +KAK G    +  I DE +     +  
Sbjct: 823  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVD 882

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L     + ER 
Sbjct: 883  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLMSREPETER- 941

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             +++  ++D         ++SE        E      L  +QLE +NWL   W+  +N I
Sbjct: 942  -VERPPADD--------WKKSESSR-----EYKNNNKLREYQLEGVNWLLFNWYNMRNCI 987

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YHG
Sbjct: 988  LADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHG 1045

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE 
Sbjct: 1046 SQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEA 1104

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P  FPS ++F ++F 
Sbjct: 1105 HRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSETTFMQEFG 1164

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 1165 DLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFT 1224

Query: 1019 ILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIK 1068
             L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I+
Sbjct: 1225 FLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQ 1284

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V    R
Sbjct: 1285 AAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGNLR 1342

Query: 1129 QAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            QAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ
Sbjct: 1343 QAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ 1402

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDILR 1235
            SK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+LR
Sbjct: 1403 SKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAPNGVQQLSKKEIEDLLR 1462

Query: 1236 WGT 1238
             G 
Sbjct: 1463 KGA 1465


>gi|324500109|gb|ADY40062.1| Chromodomain-helicase-DNA-binding protein 1 [Ascaris suum]
          Length = 1095

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 282/701 (40%), Positives = 411/701 (58%), Gaps = 74/701 (10%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVL-AK------------RKL 642
            +P V  + + K   +  +FL+KW G S++HN+W  ES LK + AK            R++
Sbjct: 317  DPNVRPAGEEKPVELERQFLIKWAGWSHLHNTWESESSLKAVNAKGLKKIDNYLKKLREI 376

Query: 643  ENYKAKYGTTVINICD----------ERWKQPQRVISLRSSKD-----GTREAFVKWTGL 687
            E +K       I   D          E++K  +RVI+ + S++     GT E +VKW+GL
Sbjct: 377  EEWKQTADKEYIEFYDCEREMNEELFEQYKVVERVIAHQVSREKGEVEGT-EYYVKWSGL 435

Query: 688  PYDECTWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE-----I 741
            PY ECTWE  DE  +  +Y    D + +  R+  K         R +   Q+ E     +
Sbjct: 436  PYSECTWE--DEHLIGRRYQDKIDAYHE-RRENAKVPNKNCPALRKRPKFQKLESMPDCL 492

Query: 742  VALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCE 801
            +  ++  +EL+      +QLE +NW+   W K  + ILADEMGLGKT+ + AF+S L+ +
Sbjct: 493  LRRSDMEQELRD-----YQLEGVNWMLHAWSKENSCILADEMGLGKTIQSIAFLSVLFHQ 547

Query: 802  FKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNK 861
            +    P LV+VPLSTM  W  EF  WA +LNVV Y G   +R  IRQ+E          +
Sbjct: 548  YDLYGPFLVVVPLSTMAAWQREFENWACDLNVVTYMGDVTSRDYIRQFEMFV-------Q 600

Query: 862  KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRV 921
             T   K NVLLTTYE++L D + L    W VL VDE HRLKN  S L+  L  FS  HR+
Sbjct: 601  GTKRLKVNVLLTTYEILLKDKAFLGAFEWAVLAVDEAHRLKNDESLLYRSLFDFSTNHRL 660

Query: 922  LLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRL 981
            L+TGTPLQN++ E++ LL+F+ P  F S   FEE  +D    + +  L + + P +LRR+
Sbjct: 661  LITGTPLQNSLKELWALLHFIMPNKFESWDDFEEDHHD-PDHRAIASLHRKLEPFLLRRV 719

Query: 982  KKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRK 1041
            KKD  +++P K E+++ V+++  Q +YY+ +LTKNY+ L    KG +    +N++M+L+K
Sbjct: 720  KKDVEKSLPAKVEQILRVDMTIQQKQYYKWILTKNYKELSKGVKG-SINGFVNLIMELKK 778

Query: 1042 VCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLD 1101
             CNH  L+   +    + +   +  +K+S KL LL  +L  L++ GHRVLIFSQM  +LD
Sbjct: 779  CCNHASLVRAYDHYEENAQARLQQLMKSSGKLILLDKLLCRLHETGHRVLIFSQMVMMLD 838

Query: 1102 ILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATA 1160
            I+++YL +   P   +R+DGS+    R+AA+  FN + S  F FLLSTR+ GLGINLATA
Sbjct: 839  IVQEYLQLRRFPS--QRLDGSMRADLRKAALDHFNAEGSTDFCFLLSTRAGGLGINLATA 896

Query: 1161 DTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF 1220
            DTVII+DSD+NP  D+QAM+RAHRIGQ K++ +YRLV +ASVEE I++ AK+KL+LD L 
Sbjct: 897  DTVIIFDSDWNPQNDLQAMSRAHRIGQKKQVNIYRLVTKASVEEEIVERAKRKLVLDHLV 956

Query: 1221 VNK---------------SGS----QKEVEDILRWGTEELF 1242
            + +               +GS    + E+  IL++G EELF
Sbjct: 957  IQRMDTTGRTVLSKSSVTNGSVPFDKHELAVILKFGAEELF 997


>gi|403216742|emb|CCK71238.1| hypothetical protein KNAG_0G01800 [Kazachstania naganishii CBS 8797]
          Length = 1476

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 281/682 (41%), Positives = 400/682 (58%), Gaps = 66/682 (9%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQL-KVLAKRKLENYKAKY----------------GTTVI 654
            Y F +KW  +S++HNSW     L +    ++L+NY  ++                   ++
Sbjct: 215  YVFFIKWADQSHLHNSWESYDSLSQTRGLKRLDNYCKQFIIQEQQFRLDPYITGEDLELM 274

Query: 655  NICDER-------WKQPQRVI-SLRSSKD-GTRE--AFVKWTGLPYDECTWEKLDEPALE 703
            ++ +ER       +  P+RVI S R ++D G+ E    VKW+ L YDE TWEK    A +
Sbjct: 275  DMENERRLDEFREYSVPERVIDSQRITRDDGSSELQYLVKWSRLNYDEVTWEK----ATD 330

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGD--CQQSEIVALTEQPEELKGGALFPHQL 761
                  +   QF+ +T  K      LP+   +   ++     L  QP  +KGG L   QL
Sbjct: 331  IVKLAPEEVAQFQNRTNSKI-----LPQYSSNYGSERPRFEKLNTQPPFVKGGELRDFQL 385

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
              +NW+   W K+ N ILADEMGLGKTV   AFIS L    +   P L++VPLSTMP W 
Sbjct: 386  TGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIYSRRQNGPHLIVVPLSTMPAWQ 445

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
              F  WAP+LN + Y G  K+R ++R YE++ ++P    KK  + KFNVL+TTYE IL D
Sbjct: 446  ETFTKWAPDLNCLCYMGNQKSRDMLRDYEFY-TNPQAKGKK--NVKFNVLMTTYEYILKD 502

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
               L  + W+ L VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  L+NF
Sbjct: 503  RDELSKIKWQFLAVDEAHRLKNAESSLYESLNSFKVTNRLLITGTPLQNNIKELAALVNF 562

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L P  F      + +  D    + + +L + + P +LRRLKKD  +++P KTER++ VEL
Sbjct: 563  LMPGRFTIDQEIDFENQDDKQEEYIRDLHQRLQPFILRRLKKDVEKSLPSKTERILRVEL 622

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP------D 1055
            S +Q EYY+ +LTKNY+ L    KG    S+LN++ +L+K  NHPYL    E        
Sbjct: 623  SDVQTEYYKNILTKNYKALTAGSKG-GHFSLLNVMSELKKASNHPYLFDNAEERVLEKFG 681

Query: 1056 SGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
             G++   + +R  I +S K+ LL  +L  L K+ HRVLIFSQM ++LDI+ DYL+I+   
Sbjct: 682  GGNLSRENILRGLIMSSGKMVLLDQLLTRLKKDNHRVLIFSQMVRMLDIMSDYLSIK--G 739

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              ++R+DG+V    R+ AI  FN  D +  VFLLSTR+ GLGINL TADTV+I+DSD+NP
Sbjct: 740  INFQRLDGTVPSAQRRIAIDHFNAPDSTDEVFLLSTRAGGLGINLMTADTVVIFDSDWNP 799

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSG 1225
             AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   +       NK  
Sbjct: 800  QADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKYT 859

Query: 1226 SQ-----KEVEDILRWGTEELF 1242
             +     KE+ +IL++G   +F
Sbjct: 860  KKNEPNAKELSEILKFGAGNMF 881


>gi|385305649|gb|EIF49609.1| chromo domain protein 1 [Dekkera bruxellensis AWRI1499]
          Length = 1429

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 279/681 (40%), Positives = 391/681 (57%), Gaps = 64/681 (9%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAKYGTTVINICD---------- 658
            +EFL+KW   ++IHN+W     L   ++   +KL+NY   Y      I +          
Sbjct: 226  FEFLIKWTDTAHIHNTWETYDGLNSRRLRGLKKLDNYINTYIIEDRQIRNDPLVTREDIE 285

Query: 659  -------------ERWKQPQRVI-SLRSSKDGTR---EAFVKWTGLPYDECTWEKLDEPA 701
                         ER+K  +R++ S R + D        FVKW  L YDECTWE   E A
Sbjct: 286  QMEIEADTRRETFERYKNVERIVTSERVTLDNGESDLRYFVKWKRLNYDECTWESSSEIA 345

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQL 761
                    D   +F+ +   K         GK    +     LT QP  +K G L   QL
Sbjct: 346  ----DIAPDAVSKFQARQNSKILPSYSASYGK---HRPRFEKLTSQPLYVKNGTLRDFQL 398

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
              LNW+   W +++N ILADEMGLGKTV   AF+S L    +   P LV+VPLST+P+W 
Sbjct: 399  TGLNWMAYLWSRNENGILADEMGLGKTVQTIAFLSWLIYARRQNGPHLVVVPLSTVPSWQ 458

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
              F LWAP++NV+ Y G  KAR  IR YE+++             KFN+LLTTYE IL D
Sbjct: 459  ETFELWAPDINVIYYMGNTKARKTIRDYEFYSG-------SKRKXKFNILLTTYEYILKD 511

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
             + L    W+ L VDE HRLKN+ S L+  L  F   +R+L+TGTPLQNN+ E+  L NF
Sbjct: 512  KAELGSFKWQYLAVDEAHRLKNAESSLYQSLMEFKVANRLLITGTPLQNNLKELAALCNF 571

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L P  F    + +         + ++ L+  + P++LRRLKKD   ++P KTER++ VEL
Sbjct: 572  LMPGKFDIDENIDFNAPGTEAEEAIKNLQSSIKPYILRRLKKDVESSLPGKTERILRVEL 631

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE------PD 1055
            S +Q +YY+ +LTKNY+ LR+   G +Q S+LN+V +L+K  NHPYL  G E        
Sbjct: 632  SDVQTDYYKNILTKNYRALRDASSG-SQVSLLNVVAELKKASNHPYLFDGVEDSVLAKAG 690

Query: 1056 SGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKT 1115
            S S E +    I +S K+ LL  +LK L ++GHRVLIFSQM ++LDI+ DYL+++     
Sbjct: 691  SKSRENILRGMIMSSGKMVLLDQLLKKLKRDGHRVLIFSQMVRMLDIIGDYLSLK--GLN 748

Query: 1116 YERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHA 1174
            ++R+DG++    R+ AI  FN D S+ F+FLLSTR+ GLGINL TADTVII+DSD+NP A
Sbjct: 749  FQRLDGTIPSYRRRIAIDHFNSDGSKDFIFLLSTRAGGLGINLMTADTVIIFDSDWNPQA 808

Query: 1175 DIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD----QLFVNKSGSQK-- 1228
            D+QAM RAHRIGQ   ++VYR V + ++EE++L+ A+KK++L+     L +    +QK  
Sbjct: 809  DLQAMARAHRIGQKNHVMVYRFVSKDTIEEQVLERARKKMILEYAIISLGITDKKTQKDE 868

Query: 1229 ----EVEDILRWGTEELFNDS 1245
                E+ +IL++G   +F  S
Sbjct: 869  PSTGELSEILKFGASNMFKTS 889


>gi|313217104|emb|CBY38281.1| unnamed protein product [Oikopleura dioica]
          Length = 1430

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 268/664 (40%), Positives = 381/664 (57%), Gaps = 61/664 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQL-KVLAKRKLENYKAKYGTTVINICD-ERWKQPQRVISLR 671
            F +KW G S IH  W+ + ++      +K+  Y +K G+T     D E    P  VI  R
Sbjct: 291  FFIKWKGYSYIHGVWLFKDEIFDPRFDQKMRRYFSKLGSTNAPDPDNEDLFNPDFVIVDR 350

Query: 672  ----------SSKDGTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
                       S   TR   VKW GL YDECTWE    +D+  +E +   +      +R+
Sbjct: 351  VLDVVEGHDAESGKETRHFLVKWCGLAYDECTWELEADVDQVKIECFRKFS------KRK 404

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA-LFPHQLEALNWLRKCWHKSKNV 777
              K+ +    + + +            E P+  K    L  +Q+E ++WL   W++ +N 
Sbjct: 405  PYKRPSDRPPISQWRK----------LEHPQRFKNSCELREYQVEGVSWLLFNWYQKRNC 454

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  FI  + CE   + P L++VPLST+ NW+ EF  W  +LN + YH
Sbjct: 455  ILADEMGLGKTIQSITFIQKI-CETNHRGPFLIVVPLSTVGNWIREFETWT-DLNAIVYH 512

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G A++R +I QYE +  D     K+   ++F+ L+TTYEMI+AD   +R V W+++++DE
Sbjct: 513  GSAQSRQMIHQYELYQRDKKGYPKR-GDFRFDALITTYEMIVADIPEIRNVNWQLMIIDE 571

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN+ SKL   L +   +H+VLLTGTPLQNNI E+Y LLNF+ P  F  +  F  ++
Sbjct: 572  AHRLKNTKSKLAENLKNMHIEHKVLLTGTPLQNNIEELYALLNFMNPTDFYDIGYFMREY 631

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
              LT  + VE+++ ++ P MLRRLK+D  +++ PK E ++ VEL++IQ +YYRA+L +N+
Sbjct: 632  GILTNKEHVEKMQNVLKPIMLRRLKEDVEKSLAPKEETIIEVELTNIQKKYYRAILERNF 691

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD-------SGSVEFLHEMRIKAS 1070
              L          S++N +M+LRK CNHP+LI G E          G V       ++AS
Sbjct: 692  DFLSKGASTGNVPSLMNTMMELRKCCNHPFLIKGAEDKIIDEYRAKGEVADPLTSIVQAS 751

Query: 1071 AKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL-NIEFGPKTYERVDGSVSVGDRQ 1129
             K+ L+H +L  L   GH+VLIFSQM ++LDILEDYL  +  G   +ER+DG +   DRQ
Sbjct: 752  GKMVLIHKLLPKLKAGGHKVLIFSQMIRVLDILEDYLYQMSMG---FERLDGRIRGNDRQ 808

Query: 1130 AAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 1188
            AAI RF   D  RFVFLL TR+ GLGINL  ADTVII+DSD+NP  D+QA  R HRIGQ 
Sbjct: 809  AAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQK 868

Query: 1189 KRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN--------------KSGSQKEVEDIL 1234
            K + +YRL+   + E  +   A  KL LD+  +                S S+KEVED+L
Sbjct: 869  KEVKIYRLLTSKTYEREMFDRASLKLGLDRAVLQSMSGTSGKDAGGPMSSLSKKEVEDLL 928

Query: 1235 RWGT 1238
            + G 
Sbjct: 929  KKGA 932


>gi|317030844|ref|XP_001392337.2| chromodomain helicase (Chd1) [Aspergillus niger CBS 513.88]
 gi|350629509|gb|EHA17882.1| hypothetical protein ASPNIDRAFT_55859 [Aspergillus niger ATCC 1015]
          Length = 1516

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 266/652 (40%), Positives = 380/652 (58%), Gaps = 50/652 (7%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVINICD---------ERW 661
            +EF +KW GKS+ H +W   ES     + R+L+NY  K  +  + + +         E+W
Sbjct: 289  FEFYIKWQGKSHYHATWETAESLANCRSTRRLDNYIRKTLSEDVRLKNDEDVAPEDREKW 348

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                          KQ +RVI +R   +GT E FVKW  L YD CTWE  +E        
Sbjct: 349  NLDRERDVDAIEDYKQVERVIGMREGDEGT-EYFVKWKRLFYDSCTWES-EELVSNIAQR 406

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    +    D SE           +     +   P  L+ G L   Q++ +N++
Sbjct: 407  EIDRFLDRSSRPPVSDKSE------TNPATRKSFETIKSTPSFLQNGQLKEFQVKGVNFM 460

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K++NV+LADEMGLGKTV   AFI+ L    + + P +V+VPLSTMP+W   F  W
Sbjct: 461  AFNWVKNRNVVLADEMGLGKTVQTVAFINWLRHVRRQQGPFVVVVPLSTMPSWAETFDYW 520

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P+LN V Y+G   AR ++R++E        ++      KFNVLLTTYE +L DS+ L  
Sbjct: 521  TPDLNYVVYNGNEAARTVLREHELM------VDGNPRRPKFNVLLTTYEYVLLDSAFLSQ 574

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
              W+ + VDE HRLKN  S+L+  L  F    R+L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 575  FKWQFMAVDEAHRLKNRESQLYLKLLEFRSPARLLITGTPIQNNLAELSALLDFLNPGLV 634

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
               +  +   N    + K+ EL K + P MLRR K     ++PPKTE+++ VELS +Q E
Sbjct: 635  HIDADMD--LNAEAASHKLAELTKAIQPFMLRRTKSKVESDLPPKTEKIIRVELSDVQLE 692

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSV---EFL 1062
            YY+ +LTKNY  L +  +G  +QS+LNI+M+L+K  NHP++ P  E     GS    + L
Sbjct: 693  YYKNILTKNYAALNDGARG-QKQSLLNIMMELKKASNHPFMFPNAEARILEGSTRREDVL 751

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              M I +S K+ LL  +L  L ++GHRVLIFSQM K+LDIL DY+  EF   TY+R+DG+
Sbjct: 752  RAM-ITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYM--EFRGYTYQRLDGT 808

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ AI  +N   S  F F+LSTR+ GLGINL TADTV+++DSD+NP AD+QAM R
Sbjct: 809  IPAAARRLAIEHYNAPGSNDFAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMAR 868

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            AHRIGQ++ + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  +I
Sbjct: 869  AHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEATEI 920


>gi|310793352|gb|EFQ28813.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001]
          Length = 1599

 Score =  471 bits (1213), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 262/643 (40%), Positives = 390/643 (60%), Gaps = 56/643 (8%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYK---------AKYGTTVINICDER- 660
            +E+ +KW GKS++H++W     L+ +   R++ENY           ++G  +     E+ 
Sbjct: 292  FEYYIKWQGKSHLHDTWETTDTLRGMRGYRRVENYFRTIVENELLIRFGEDIPPETKEQF 351

Query: 661  -------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                         + +  R++++R   D T E  VKW G  YDECTWE     A    S 
Sbjct: 352  FLDRERAEEALEDYTKVDRIVAVRDGDDET-EYLVKWKGCYYDECTWE----AASAISSD 406

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQ-QSEIVALTEQPEELKGGALFPHQLEALNW 766
              D   QF  ++ +   S+    R + + + ++ +  L  QP+ +KGG L   QL  LN+
Sbjct: 407  FQDKIDQFLDRSSRSWVSD----RKESNPETRTRMTKLEAQPDYIKGGELRSFQLRGLNF 462

Query: 767  LRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFAL 826
            L   W ++ NVILADEMGLGKTV + +F+S L  E + + P L++ PLS +P W   F  
Sbjct: 463  LCLNWTRANNVILADEMGLGKTVQSVSFLSWLRNEREQEGPFLIVAPLSVIPAWGDTFDN 522

Query: 827  WAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLR 886
            W+P++N V Y G   +R+ IR  E        +N      KFN L+T+YEMIL D   L+
Sbjct: 523  WSPDMNYVVYLGNETSRSTIRDNELM------VNGNPKKPKFNALITSYEMILQDWQFLQ 576

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
             + W+ L+VDE HRLKN  S+L++ L SF    ++L+TGTP+QNN+ E+  L++FL P  
Sbjct: 577  QIKWQALLVDEAHRLKNKESQLYARLVSFGVPCKILITGTPIQNNLAELSALMDFLNPGK 636

Query: 947  FPSLSSFEEKFNDLT---TTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
                   +E+  +L    T +K+++L K +AP++LRR K+    ++PPKTE+++ VELS 
Sbjct: 637  V----VIDEELENLAGNDTQEKLQDLHKSIAPYILRRTKETVESDLPPKTEKIIRVELSD 692

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEF 1061
            +Q EYY+ +LT+NY  L N      + S+LNI+M+L+KV NHPY+ PG E    +GS   
Sbjct: 693  VQLEYYKNILTRNYAALSNATG--QKNSLLNIMMELKKVSNHPYMFPGAEDRVLAGSTRR 750

Query: 1062 LHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
              +++  I +S K+ LL  +L  L K+GHRVL+FSQM K+LDIL DY+ +  G K ++R+
Sbjct: 751  EDQIKGLIASSGKMMLLDQLLTKLKKDGHRVLVFSQMVKMLDILSDYMALR-GYK-FQRL 808

Query: 1120 DGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DG+++ G R+ AI  FN +D   F FLLSTR+ GLGINL TADTV+I+DSD+NP AD+QA
Sbjct: 809  DGTIAAGPRRMAINHFNAEDSDDFCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQA 868

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            M RAHRIGQ K + +YRLV + +VEE +L+ A+ KL+L+ L +
Sbjct: 869  MGRAHRIGQKKPVSIYRLVSKETVEEEVLERARNKLLLEYLTI 911


>gi|330803796|ref|XP_003289888.1| hypothetical protein DICPUDRAFT_154353 [Dictyostelium purpureum]
 gi|325079999|gb|EGC33573.1| hypothetical protein DICPUDRAFT_154353 [Dictyostelium purpureum]
          Length = 1851

 Score =  471 bits (1213), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/615 (43%), Positives = 382/615 (62%), Gaps = 37/615 (6%)

Query: 679  EAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQ 738
            +  VKW  LPY E TWE  ++  + +Y    DLF+   RQ   ++A       G     +
Sbjct: 645  QYLVKWKVLPYSEVTWEYPED--IVEYQSEIDLFLT--RQQNNQNAPAKPNSVGAKKRLE 700

Query: 739  SEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSL 798
                 L +QP  +  G L  +Q+E LNWL   W  + NVILADEMGLGKT+   +F+S L
Sbjct: 701  QGFTKLDKQPSWISAGTLRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLSYL 760

Query: 799  YCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDN 858
            + E   K P LV+VPLST+ NW  EFA WAP +N++ Y G + +R IIR +E+   + + 
Sbjct: 761  FNEQSIKGPFLVVVPLSTIENWQREFAKWAPLMNLIVYTGSSTSREIIRMHEFFTINRNG 820

Query: 859  LNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQ 918
              K      F+VLLTTY+ IL D + L  + WE L VDE HRLKNS S L  +L  +   
Sbjct: 821  KKK----LNFHVLLTTYDFILKDKNILGSIKWEFLAVDEAHRLKNSESVLHEVLKLYHTT 876

Query: 919  HRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHML 978
            +R+L+TGTPLQN++ E++NLLNFL P  F SL  F+++++DL    ++ +L  ++ PH+L
Sbjct: 877  NRLLVTGTPLQNSLKELWNLLNFLMPNKFTSLKDFQDQYSDLKENDQIAQLHSVLKPHLL 936

Query: 979  RRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQ 1038
            RR+KKD  +++PPKTER++ V+LS++Q +YY+ +LTKN+Q L    KG  + ++LNI+ +
Sbjct: 937  RRIKKDVEKSLPPKTERILRVDLSAVQKKYYKWILTKNFQELNKGVKG-EKTTLLNIMTE 995

Query: 1039 LRKVCNHPYLIPGT--EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            L+K CNHPYL      E +  + + L  M IKAS KL LL  +L  L + GHRVLIFSQM
Sbjct: 996  LKKTCNHPYLYESAKEECEQNAKDPLEAM-IKASGKLVLLDKLLVRLKETGHRVLIFSQM 1054

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGI 1155
             ++LDIL +YL  +     ++R+DGS+S  +R  A+ RFN  D   F FLLST++ GLGI
Sbjct: 1055 VRMLDILAEYL--KGRSFCFQRLDGSMSRENRSKAMDRFNAVDSPDFCFLLSTKAGGLGI 1112

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NL+TADTV+I+DSD+NP  D+QA  RAHRIGQ   + +YRLV + SVEE IL+ AK+K++
Sbjct: 1113 NLSTADTVVIFDSDWNPQNDLQAEARAHRIGQKNHVNIYRLVSKKSVEEDILERAKQKMV 1172

Query: 1216 LDQLFVN--------KSGS------------QKEVEDILRWGTEELFNDSPGINGKDMGE 1255
            LD L +         K+GS            ++E+E IL++G E+LF +     G  + E
Sbjct: 1173 LDHLVIQTMEKSQTAKAGSGQAPNSNPNVFKKEELEAILKFGAEDLFKEGEDNQGNSIEE 1232

Query: 1256 NNTSIEEAVRDLEQK 1270
                I+E +   EQ+
Sbjct: 1233 --MDIDEILSRAEQR 1245


>gi|134076845|emb|CAK45266.1| unnamed protein product [Aspergillus niger]
          Length = 1504

 Score =  471 bits (1213), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/652 (40%), Positives = 380/652 (58%), Gaps = 50/652 (7%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVINICD---------ERW 661
            +EF +KW GKS+ H +W   ES     + R+L+NY  K  +  + + +         E+W
Sbjct: 277  FEFYIKWQGKSHYHATWETAESLANCRSTRRLDNYIRKTLSEDVRLKNDEDVAPEDREKW 336

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                          KQ +RVI +R   +GT E FVKW  L YD CTWE  +E        
Sbjct: 337  NLDRERDVDAIEDYKQVERVIGMREGDEGT-EYFVKWKRLFYDSCTWES-EELVSNIAQR 394

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    +    D SE           +     +   P  L+ G L   Q++ +N++
Sbjct: 395  EIDRFLDRSSRPPVSDKSE------TNPATRKSFETIKSTPSFLQNGQLKEFQVKGVNFM 448

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K++NV+LADEMGLGKTV   AFI+ L    + + P +V+VPLSTMP+W   F  W
Sbjct: 449  AFNWVKNRNVVLADEMGLGKTVQTVAFINWLRHVRRQQGPFVVVVPLSTMPSWAETFDYW 508

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P+LN V Y+G   AR ++R++E        ++      KFNVLLTTYE +L DS+ L  
Sbjct: 509  TPDLNYVVYNGNEAARTVLREHELM------VDGNPRRPKFNVLLTTYEYVLLDSAFLSQ 562

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
              W+ + VDE HRLKN  S+L+  L  F    R+L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 563  FKWQFMAVDEAHRLKNRESQLYLKLLEFRSPARLLITGTPIQNNLAELSALLDFLNPGLV 622

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
               +  +   N    + K+ EL K + P MLRR K     ++PPKTE+++ VELS +Q E
Sbjct: 623  HIDADMD--LNAEAASHKLAELTKAIQPFMLRRTKSKVESDLPPKTEKIIRVELSDVQLE 680

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSV---EFL 1062
            YY+ +LTKNY  L +  +G  +QS+LNI+M+L+K  NHP++ P  E     GS    + L
Sbjct: 681  YYKNILTKNYAALNDGARG-QKQSLLNIMMELKKASNHPFMFPNAEARILEGSTRREDVL 739

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              M I +S K+ LL  +L  L ++GHRVLIFSQM K+LDIL DY+  EF   TY+R+DG+
Sbjct: 740  RAM-ITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYM--EFRGYTYQRLDGT 796

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ AI  +N   S  F F+LSTR+ GLGINL TADTV+++DSD+NP AD+QAM R
Sbjct: 797  IPAAARRLAIEHYNAPGSNDFAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMAR 856

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            AHRIGQ++ + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  +I
Sbjct: 857  AHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEATEI 908


>gi|19115879|ref|NP_594967.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces pombe 972h-]
 gi|15214050|sp|O14139.1|HRP3_SCHPO RecName: Full=Chromodomain helicase hrp3; AltName: Full=ATP-dependent
            helicase hrp3
 gi|2408073|emb|CAB16277.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces pombe]
          Length = 1388

 Score =  471 bits (1212), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 275/739 (37%), Positives = 411/739 (55%), Gaps = 76/739 (10%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENY----------------KAKYGTTVI 654
            YEFL+KWV  S++H +W P + + ++   +K++N+                  +     +
Sbjct: 214  YEFLIKWVNFSHLHCTWEPYNNISMIRGSKKVDNHIKQVILLDREIREDPTTTREDIEAM 273

Query: 655  NICDER-------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
            +I  ER       +KQ  R+++   + DG+ E  VKW  L YD CTWE          S 
Sbjct: 274  DIEKERKRENYEEYKQVDRIVAKHLNSDGSVEYLVKWKQLLYDFCTWEA---------SS 324

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGD---CQQSEIVALTEQPEELKGGALFPHQLEAL 764
            + +     E Q   ++  E  L   +G      + +   L +QP  + GG L   QL  +
Sbjct: 325  IIEPIAATEIQAF-QEREESALSPSRGTNYGNSRPKYRKLEQQPSYITGGELRDFQLTGV 383

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NW+   WHK++N ILADEMGLGKTV   AF+S L    +   P LV+VPLST+P W    
Sbjct: 384  NWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLRQHGPFLVVVPLSTVPAWQETL 443

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
            ALWA ++N + Y G   +R +IR YE++          T   KFN+LLTTYE +L D S 
Sbjct: 444  ALWASDMNCISYLGNTTSRQVIRDYEFYVDG-------TQKIKFNLLLTTYEYVLKDRSV 496

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L  + W+ + +DE HRLKNS S L+  L+ F   +R+L+TGTPLQNNI E+  L++FL P
Sbjct: 497  LSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQNNIRELAALVDFLMP 556

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F        +  D      +  L++ + P++LRRLKKD  +++P K+ER++ VELS +
Sbjct: 557  GKFEIREEINLEAPDEEQEAYIRSLQEHLQPYILRRLKKDVEKSLPSKSERILRVELSDL 616

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP-------DSG 1057
            Q  +Y+ +LT+NY++L       +Q S+LNIV++L+K  NHPYL  G E          G
Sbjct: 617  QMYWYKNILTRNYRVLTQSISSGSQISLLNIVVELKKASNHPYLFDGVEESWMQKINSQG 676

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
              + + +  I  S K+ LL  +L  L ++GHRVLIFSQM ++LDIL DYL++   P  ++
Sbjct: 677  RRDEVLKGLIMNSGKMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYP--HQ 734

Query: 1118 RVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG+V    R+ +I  FN   S  FVFLLSTR+ GLGINL TADTVII+DSD+NP AD+
Sbjct: 735  RLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADL 794

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKS 1224
            QAM RAHRIGQ   ++VYRL+ + ++EE +L+ A++K++L+   +            N  
Sbjct: 795  QAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERARRKMILEYAIISLGVTDKQKNSKNDK 854

Query: 1225 GSQKEVEDILRWGTEELF---NDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGD- 1280
             S +E+  IL++G   +F   N+   +   ++ E    I E   D +  +   G  +G  
Sbjct: 855  FSAEELSAILKFGASNMFKAENNQKKLEDMNLDE----ILEHAEDHDTSNDVGGASMGGE 910

Query: 1281 --VYQDKCTEGSTKIVWDE 1297
              + Q + T+    + WD+
Sbjct: 911  EFLKQFEVTDYKADVSWDD 929


>gi|324500144|gb|ADY40077.1| Chromodomain-helicase-DNA-binding protein 1 [Ascaris suum]
          Length = 1875

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 282/701 (40%), Positives = 411/701 (58%), Gaps = 74/701 (10%)

Query: 596  EPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVL-AK------------RKL 642
            +P V  + + K   +  +FL+KW G S++HN+W  ES LK + AK            R++
Sbjct: 317  DPNVRPAGEEKPVELERQFLIKWAGWSHLHNTWESESSLKAVNAKGLKKIDNYLKKLREI 376

Query: 643  ENYKAKYGTTVINICD----------ERWKQPQRVISLRSSKD-----GTREAFVKWTGL 687
            E +K       I   D          E++K  +RVI+ + S++     GT E +VKW+GL
Sbjct: 377  EEWKQTADKEYIEFYDCEREMNEELFEQYKVVERVIAHQVSREKGEVEGT-EYYVKWSGL 435

Query: 688  PYDECTWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE-----I 741
            PY ECTWE  DE  +  +Y    D + +  R+  K         R +   Q+ E     +
Sbjct: 436  PYSECTWE--DEHLIGRRYQDKIDAYHE-RRENAKVPNKNCPALRKRPKFQKLESMPDCL 492

Query: 742  VALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCE 801
            +  ++  +EL+      +QLE +NW+   W K  + ILADEMGLGKT+ + AF+S L+ +
Sbjct: 493  LRRSDMEQELRD-----YQLEGVNWMLHAWSKENSCILADEMGLGKTIQSIAFLSVLFHQ 547

Query: 802  FKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNK 861
            +    P LV+VPLSTM  W  EF  WA +LNVV Y G   +R  IRQ+E          +
Sbjct: 548  YDLYGPFLVVVPLSTMAAWQREFENWACDLNVVTYMGDVTSRDYIRQFEMFV-------Q 600

Query: 862  KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRV 921
             T   K NVLLTTYE++L D + L    W VL VDE HRLKN  S L+  L  FS  HR+
Sbjct: 601  GTKRLKVNVLLTTYEILLKDKAFLGAFEWAVLAVDEAHRLKNDESLLYRSLFDFSTNHRL 660

Query: 922  LLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRL 981
            L+TGTPLQN++ E++ LL+F+ P  F S   FEE  +D    + +  L + + P +LRR+
Sbjct: 661  LITGTPLQNSLKELWALLHFIMPNKFESWDDFEEDHHD-PDHRAIASLHRKLEPFLLRRV 719

Query: 982  KKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRK 1041
            KKD  +++P K E+++ V+++  Q +YY+ +LTKNY+ L    KG +    +N++M+L+K
Sbjct: 720  KKDVEKSLPAKVEQILRVDMTIQQKQYYKWILTKNYKELSKGVKG-SINGFVNLIMELKK 778

Query: 1042 VCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLD 1101
             CNH  L+   +    + +   +  +K+S KL LL  +L  L++ GHRVLIFSQM  +LD
Sbjct: 779  CCNHASLVRAYDHYEENAQARLQQLMKSSGKLILLDKLLCRLHETGHRVLIFSQMVMMLD 838

Query: 1102 ILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATA 1160
            I+++YL +   P   +R+DGS+    R+AA+  FN + S  F FLLSTR+ GLGINLATA
Sbjct: 839  IVQEYLQLRRFPS--QRLDGSMRADLRKAALDHFNAEGSTDFCFLLSTRAGGLGINLATA 896

Query: 1161 DTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF 1220
            DTVII+DSD+NP  D+QAM+RAHRIGQ K++ +YRLV +ASVEE I++ AK+KL+LD L 
Sbjct: 897  DTVIIFDSDWNPQNDLQAMSRAHRIGQKKQVNIYRLVTKASVEEEIVERAKRKLVLDHLV 956

Query: 1221 VNK---------------SGS----QKEVEDILRWGTEELF 1242
            + +               +GS    + E+  IL++G EELF
Sbjct: 957  IQRMDTTGRTVLSKSSVTNGSVPFDKHELAVILKFGAEELF 997


>gi|448115219|ref|XP_004202771.1| Piso0_001627 [Millerozyma farinosa CBS 7064]
 gi|359383639|emb|CCE79555.1| Piso0_001627 [Millerozyma farinosa CBS 7064]
          Length = 1375

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 291/724 (40%), Positives = 403/724 (55%), Gaps = 83/724 (11%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKY-----------GTTVINI- 656
            + Y F +KW   S++HN+W   S LK     R++ENY  +Y            TT  +I 
Sbjct: 175  LDYLFKIKWSDTSHLHNTWEAWSTLKNYKGFRRVENYIKQYIVLDQEIRKDPSTTSEDIE 234

Query: 657  -----------CDERWKQPQRVI-SLRSSKDGTR--EAFVKWTGLPYDECTWEKLDEPAL 702
                         E + + +R++ S R   DG    + F KW  L YDEC+WE  ++ A 
Sbjct: 235  AMDIELERRRDEQEEYTKVERIVDSERVEVDGQSKLQFFCKWKRLYYDECSWEDAEQVAE 294

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLE 762
                 +T    +   + L        L       Q+     L +QP  +K G L   QL 
Sbjct: 295  IAPEQVTKYQQRLNSKILP------HLSANYPHSQRPRFEKLVKQPLFIKNGELRDFQLT 348

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNW+   W +++N ILADEMGLGKTV   +F+S L    +   P LV+VPLST+ +W  
Sbjct: 349  GLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIYARRQNGPHLVVVPLSTITSWQE 408

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
             F  WAP++N V Y G + AR  +R YE++       NKK    KFN+LLTTYE +L D 
Sbjct: 409  TFEKWAPDVNCVYYLGNSAARKTVRDYEFYQ------NKKI---KFNILLTTYEYVLKDR 459

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            S L  + W+ L VDE HRLKN  S L+  L SF   +R+L+TGTPLQNNI E+  L NFL
Sbjct: 460  SELGSIKWQFLAVDEAHRLKNEESSLYESLKSFKVGNRLLITGTPLQNNIKELNALCNFL 519

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F      + +  +    Q +++L+K + P +LRRLKKD  +++P K+ER++ VELS
Sbjct: 520  MPGRFNIGQEIDFETPNREQEQYIKDLQKNIQPFILRRLKKDVEKSLPSKSERILRVELS 579

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE------PDS 1056
             +Q EYYR +LTKNY  L N G   +Q S+LN+V +L+K  NHPYL  G E        S
Sbjct: 580  DLQTEYYRNILTKNYSAL-NAGNKGSQISLLNVVSELKKASNHPYLFDGAEERALAKASS 638

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
             S + +    I +S K+ LL  +L  L KEGHRVLIFSQM ++LDIL DYL+I+     +
Sbjct: 639  TSRDNILRGIIMSSGKMVLLEQLLNRLKKEGHRVLIFSQMVRILDILGDYLSIK--GLQF 696

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            +R+DG V    R+ +I  FN   S+ FVFLLSTR+ GLGINL TADTVII+DSD+NP AD
Sbjct: 697  QRLDGGVPSSQRRISIDHFNAPDSKDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQAD 756

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD----QLFVNKSGSQK--- 1228
            +QAM RAHRIGQ   + VYR V + ++EE IL+ A+KK++L+     L +  + SQK   
Sbjct: 757  LQAMARAHRIGQKNHVSVYRFVSKDTIEEEILERARKKMILEYAIISLGITDNTSQKSKS 816

Query: 1229 -----EVEDILRWGTEELF--NDSPG-----------------INGKDMGENNTSIEEAV 1264
                 E+ +IL++G   +F  ND+                   +   D+GE+N   EE +
Sbjct: 817  DPSTGELSEILKFGAGNMFKANDNQKKLEDLNLDDVLKHAEDHVTTPDLGESNLGSEEFL 876

Query: 1265 RDLE 1268
            +  E
Sbjct: 877  KQFE 880


>gi|238498532|ref|XP_002380501.1| chromodomain helicase (Chd1), putative [Aspergillus flavus NRRL3357]
 gi|220693775|gb|EED50120.1| chromodomain helicase (Chd1), putative [Aspergillus flavus NRRL3357]
          Length = 1446

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/651 (40%), Positives = 380/651 (58%), Gaps = 48/651 (7%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVI---------------- 654
            +EF +KW GKS+ H +W   ES     + R+L+NY  K     I                
Sbjct: 287  FEFYIKWQGKSHYHATWETAESLANCRSTRRLDNYIRKVLYEDIRLRQDEDVAPEDREKW 346

Query: 655  NICDER-------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
            N+  ER       +KQ +RVI+ R   +GT E  VKW  L YD CTWE  +E   E    
Sbjct: 347  NLDRERDVDAIEDYKQVERVIATREGDEGT-EYLVKWKRLFYDSCTWEN-EELVSEIAQC 404

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    +    D SE           +    A+   P  L+ G L   Q++ +N++
Sbjct: 405  EIDRFLNRSSRPPVSDKSE------SNPASRKSFEAIKGTPSFLRNGELKEFQVKGVNFM 458

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K++NV+LADEMGLGKTV   +FI+ L    + + P +V+VPLSTMP+W   F  W
Sbjct: 459  AFNWVKNRNVVLADEMGLGKTVQTVSFINWLRHVRRQQGPFVVVVPLSTMPSWAETFDNW 518

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P+LN V Y+G   AR ++R++E        ++      KFNVLLTTYE +L DSS L  
Sbjct: 519  TPDLNYVVYNGNEAARTVLREHELM------IDGNPRRPKFNVLLTTYEYVLLDSSFLSQ 572

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
              W+ + +DE HRLKN  S+L++ L  F    R+L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 573  FKWQFMAIDEAHRLKNRESQLYAKLLEFRSPARLLITGTPIQNNLAELSALLDFLNPGLV 632

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
               +  +   N    +QK+ EL K + P MLRR K     ++PPK E+++ VELS +Q E
Sbjct: 633  DIDADMD--LNAEAASQKLAELTKAIQPFMLRRTKSKVESDLPPKVEKIIRVELSDVQLE 690

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFLHEM 1065
            YY+ +LTKNY  L +  KG  +QS+LNI+M+L+K  NHP++ P  E     GS      +
Sbjct: 691  YYKNILTKNYAALNDGAKG-QKQSLLNIMMELKKASNHPFMFPNAEAKILDGSTRREDVL 749

Query: 1066 R--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
            R  I +S K+ LL  +L  L ++GHRVLIFSQM K+LD+L +Y+  EF   TY+R+DG++
Sbjct: 750  RAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGEYM--EFRGYTYQRLDGTI 807

Query: 1124 SVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
                R+ AI  +N    S F F+LSTR+ GLGINL TADTV+++DSD+NP AD+QAM RA
Sbjct: 808  PAASRRLAIEHYNAPGSSDFAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARA 867

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            HRIGQ++ + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  +I
Sbjct: 868  HRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEASEI 918


>gi|444730344|gb|ELW70731.1| Chromodomain-helicase-DNA-binding protein 2 [Tupaia chinensis]
          Length = 1104

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 276/654 (42%), Positives = 385/654 (58%), Gaps = 51/654 (7%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 311  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 370

Query: 653  VINICDERWKQPQ---RVI--SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPAL-EKYS 706
               +  E  KQ Q   RVI  S +       E   KW GLPY EC+WE  DE  + +K+ 
Sbjct: 371  QQELASELNKQYQIVERVIAHSRKPVPSNEPEYLCKWMGLPYSECSWE--DEALIGKKFQ 428

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG--ALFPHQLEAL 764
               D F    R   K   + +     K   Q+   VAL +QP  L G    L  +QLE L
Sbjct: 429  SCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYLGGENLELRDYQLEGL 482

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P L++VPLST+ +W  EF
Sbjct: 483  NWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREF 542

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
             +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN L+TTYE++L D + 
Sbjct: 543  EIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFNALITTYEILLKDKTV 595

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+ P
Sbjct: 596  LGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP 655

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F     FEE           + L K++ P +LRR+KKD  +++P K E+++ VE+S++
Sbjct: 656  EKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSAL 714

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVEFL 1062
            Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI  P         E L
Sbjct: 715  QKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLIKPPEENERENGQEIL 773

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL I+  P  ++R+DGS
Sbjct: 774  LSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYP--FQRLDGS 830

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA  R
Sbjct: 831  IKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR 890

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILR 1235
            AHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L + +  +     +I R
Sbjct: 891  AHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVNIYR 944


>gi|255731139|ref|XP_002550494.1| chromo domain protein 1 [Candida tropicalis MYA-3404]
 gi|240132451|gb|EER32009.1| chromo domain protein 1 [Candida tropicalis MYA-3404]
          Length = 1423

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 292/729 (40%), Positives = 406/729 (55%), Gaps = 90/729 (12%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKY----------------GTT 652
            + Y F VKW   S++HN+W     LK     RKL+NY  ++                   
Sbjct: 191  LDYLFKVKWTDASHLHNTWEKYQDLKNYKGFRKLDNYIKQFIIYDQEIRNDPLTTKEDIE 250

Query: 653  VINICDER-------WKQPQRVISLR--SSKDGTR--EAFVKWTGLPYDECTWEKLDEPA 701
             ++I  ER       + Q +R++      S DGT   + FVKW  L YDEC+WE  +E A
Sbjct: 251  SMDIERERKRDEQEEYTQVERIVDSERIESDDGTTKLQYFVKWKRLYYDECSWEDAEEIA 310

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE---IVALTEQPEELKGGALFP 758
                  +    V+  +Q L        LP    +  QS+      L +QP  +K G L  
Sbjct: 311  -----KIAPEQVKKYQQRLNSKI----LPSLSANYPQSQRPRFEKLFKQPVFIKNGELRD 361

Query: 759  HQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
             QL  LNW+   W +++N ILADEMGLGKTV   AF+S L    +   P LV+VPLST+P
Sbjct: 362  FQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHLVVVPLSTVP 421

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
             W   F  WAP++N + Y G  +AR  IR YE++     N N K    KFN+LLTTYE I
Sbjct: 422  AWQETFEKWAPDVNCIYYLGNGEARKNIRDYEFY-----NQNNKP---KFNILLTTYEYI 473

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            L D + L    W+ L VDE HRLKN+ S L+  L SF   +R+L+TGTPLQNN+ E+  L
Sbjct: 474  LKDKTELGSFKWQFLAVDEAHRLKNAESSLYEALKSFKVSNRLLITGTPLQNNVKELAAL 533

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
             NFL P  F      +    D    Q +++L+K + P +LRRLKKD  +++P K+ER++ 
Sbjct: 534  CNFLMPGKFNIDQEIDFDSIDKEQEQYIKDLQKKINPFILRRLKKDVEKSLPSKSERILR 593

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE----P 1054
            VELS IQ EYY+ ++TKNY  L N G   +Q S+LN++ +L+K  NHPYL  G E     
Sbjct: 594  VELSDIQTEYYKNIITKNYAAL-NAGNKGSQISLLNVMSELKKASNHPYLFDGAEERVLE 652

Query: 1055 DSGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFG 1112
             +GS    + +R  I +S K+ LL  +L  L KEGHRVLIFSQM ++LDIL DY+ I+  
Sbjct: 653  KAGSYSRENTLRGMIMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRMLDILGDYMFIK-- 710

Query: 1113 PKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFN 1171
               ++R+DG++    R+ +I  FN   S+ F FLLSTR+ GLGINL TADTVII+DSD+N
Sbjct: 711  GYQFQRLDGTIPSSQRKISIDHFNAPDSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWN 770

Query: 1172 PHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN--------- 1222
            P AD+QAM RAHRIGQ   + VYR V + +VEE+IL+ A+KK++L+   ++         
Sbjct: 771  PQADLQAMARAHRIGQKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIISLGITDPNAK 830

Query: 1223 KSG----SQKEVEDILRWGTEELFNDSPG-------------------INGKDMGENNTS 1259
            K+G    S  E+  IL++G   +F ++                     +   D+GE+N  
Sbjct: 831  KNGKTDPSTSELSQILKFGAGTMFKENNNQQKLENLNLDDVLSHAEDHVTTPDLGESNLG 890

Query: 1260 IEEAVRDLE 1268
             EE ++  E
Sbjct: 891  SEEFLKQFE 899


>gi|67521594|ref|XP_658859.1| hypothetical protein AN1255.2 [Aspergillus nidulans FGSC A4]
 gi|40746692|gb|EAA65848.1| hypothetical protein AN1255.2 [Aspergillus nidulans FGSC A4]
 gi|259488424|tpe|CBF87846.1| TPA: chromodomain helicase (Chd1), putative (AFU_orthologue;
            AFUA_1G10290) [Aspergillus nidulans FGSC A4]
          Length = 1517

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/651 (41%), Positives = 378/651 (58%), Gaps = 48/651 (7%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAK---------YGTTVINICDERW 661
            +EF +KW  KS+ H +W   ES     + R+L+NY  K         Y   V     E+W
Sbjct: 286  FEFYIKWQEKSHYHATWETTESLANCRSTRRLDNYVRKVLAEDLRLNYDEGVPPEDREKW 345

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                          K  +RVI++R  +DGT E  VKW  L YD CTWE  +E        
Sbjct: 346  NLDRERDVDAIEDHKIVERVIAMREGEDGT-EYLVKWKRLFYDSCTWES-EELISNIAQR 403

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    +    D  E           +     +   P  L  G L   Q++ +N++
Sbjct: 404  EIDRFLDRSSRPPVSDKKESH------PSSRKPFEPIKGTPSFLHNGQLKEFQVKGVNFM 457

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K++NV+LADEMGLGKTV   AFIS L    + + P +V+VPLSTMP+W   F  W
Sbjct: 458  AFNWVKNRNVVLADEMGLGKTVQTVAFISWLRHVRRQQGPFVVVVPLSTMPSWAETFDNW 517

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            +P+LN V Y+G   +R ++++YE        ++      KFNVLLTTYE +L DSS L  
Sbjct: 518  SPDLNYVVYNGNEASRNVLKEYELM------VDGNPRRPKFNVLLTTYEYVLVDSSFLSQ 571

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
              W+ + VDE HRLKN  S+L+  L  F+   R+L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 572  FNWQFMAVDEAHRLKNRDSQLYIKLQEFNSPARLLITGTPIQNNLAELSALLDFLNPGLV 631

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
               +  +   N    ++K+ EL K ++P MLRR K     ++PPKTE+++ VELS +Q E
Sbjct: 632  NVDADMD--LNSEAASEKLAELTKAISPFMLRRTKTKVESDLPPKTEKIIRVELSDVQLE 689

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFLHEM 1065
            YY+ +LTKNY  L    KG  +QS+LNI+M+L+K  NHP++ P  E     GS      +
Sbjct: 690  YYKNILTKNYAALNEGTKG-QKQSLLNIMMELKKASNHPFMFPSAETKILEGSTRREDVL 748

Query: 1066 R--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
            R  I +S K+ LL  +L  L ++GHRVLIFSQM K+LDIL DY+  E+   TY+R+DG++
Sbjct: 749  RALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYM--EYRGYTYQRLDGTI 806

Query: 1124 SVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
                R+ AI  +N  D S F F+LSTR+ GLGINL TADTVI++DSD+NP AD+QAM RA
Sbjct: 807  PSASRRLAIEHYNAPDSSDFAFILSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARA 866

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            HRIGQ+K + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  +I
Sbjct: 867  HRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEASEI 917


>gi|391865405|gb|EIT74689.1| chromodomain-helicase DNA-binding protein [Aspergillus oryzae 3.042]
          Length = 1519

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 267/652 (40%), Positives = 381/652 (58%), Gaps = 50/652 (7%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVI---------------- 654
            +EF +KW GKS+ H +W   ES     + R+L+NY  K     I                
Sbjct: 293  FEFYIKWQGKSHYHATWETAESLANCRSTRRLDNYIRKVLYEDIRLRQDEDVAPEDREKW 352

Query: 655  NICDER-------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
            N+  ER       +KQ +RVI+ R   +GT E  VKW  L YD CTWE  +E   E    
Sbjct: 353  NLDRERDVDAIEDYKQVERVIATREGDEGT-EYLVKWKRLFYDSCTWEN-EELVSEIAQC 410

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    +    D SE           +    A+   P  L+ G L   Q++ +N++
Sbjct: 411  EIDRFLNRSSRPPVSDKSE------SNPASRKSFEAIKGTPSFLRNGELKEFQVKGVNFM 464

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K++NV+LADEMGLGKTV   +FI+ L    + + P +V+VPLSTMP+W   F  W
Sbjct: 465  AFNWVKNRNVVLADEMGLGKTVQTVSFINWLRHVRRQQGPFVVVVPLSTMPSWAETFDNW 524

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P+LN V Y+G   AR ++R++E        ++      KFNVLLTTYE +L DSS L  
Sbjct: 525  TPDLNYVVYNGNEAARTVLREHELM------IDGNPRRPKFNVLLTTYEYVLLDSSFLSQ 578

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
              W+ + +DE HRLKN  S+L++ L  F    R+L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 579  FKWQFMAIDEAHRLKNRESQLYAKLLEFRSPARLLITGTPIQNNLAELSALLDFLNPGLV 638

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
               +  +   N    +QK+ EL K + P MLRR K     ++PPK E+++ VELS +Q E
Sbjct: 639  DIDADMD--LNAEAASQKLAELTKAIQPFMLRRTKSKVESDLPPKVEKIIRVELSDVQLE 696

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSV---EFL 1062
            YY+ +LTKNY  L +  KG  +QS+LNI+M+L+K  NHP++ P  E     GS    + L
Sbjct: 697  YYKNILTKNYAALNDGAKG-QKQSLLNIMMELKKASNHPFMFPNAEAKILDGSTRREDVL 755

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              M I +S K+ LL  +L  L ++GHRVLIFSQM K+LD+L +Y+  EF   TY+R+DG+
Sbjct: 756  RAM-ITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGEYM--EFRGYTYQRLDGT 812

Query: 1123 VSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ AI  +N    S F F+LSTR+ GLGINL TADTV+++DSD+NP AD+QAM R
Sbjct: 813  IPAASRRLAIEHYNAPGSSDFAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMAR 872

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            AHRIGQ++ + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  +I
Sbjct: 873  AHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEASEI 924


>gi|365985357|ref|XP_003669511.1| hypothetical protein NDAI_0C06090 [Naumovozyma dairenensis CBS 421]
 gi|343768279|emb|CCD24268.1| hypothetical protein NDAI_0C06090 [Naumovozyma dairenensis CBS 421]
          Length = 1483

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 282/684 (41%), Positives = 393/684 (57%), Gaps = 66/684 (9%)

Query: 611  SYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKY----------------GTTV 653
            +Y+FL+KW  +S++HN+W     L  L   +KL+NY  ++                   V
Sbjct: 228  NYQFLIKWTDQSHLHNTWETYESLSYLRGLKKLDNYCKQFIIQDQQVRLDPYITAEDIEV 287

Query: 654  INICDER-------WKQPQRVISLR--SSKDGTRE--AFVKWTGLPYDECTWEK---LDE 699
            +++  ER       +  P+R+I  +  S  DGT +    VKW  L YDE TWE    + +
Sbjct: 288  MDMEAERRADEFEEFTIPERIIDSQRISLDDGTSQLQYLVKWKRLNYDEATWESATDIVK 347

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPH 759
             + E+  H       F+ +T  K   +  +     +  + +   LT QP  +KGG L   
Sbjct: 348  LSPEQVKH-------FQNRTNSKILPQHSITYS-SNSSRPKFEKLTAQPSYIKGGELRDF 399

Query: 760  QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPN 819
            QL  +NW+   W K+ N ILADEMGLGKTV   AFIS L    K   P LV+VPLSTMP 
Sbjct: 400  QLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIYARKQNGPHLVVVPLSTMPA 459

Query: 820  WLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMIL 879
            W   F  WAP LN + Y G  ++R  IR++E++ ++P    KK  + KFNVL+TTYE IL
Sbjct: 460  WQETFEKWAPELNCICYMGNQRSRDTIREFEFY-TNPQAKGKK--NVKFNVLMTTYEYIL 516

Query: 880  ADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLL 939
             D S L  + W+ L VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  L+
Sbjct: 517  KDCSELGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVNNRLLITGTPLQNNIKELAALV 576

Query: 940  NFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPV 999
            NFL P  F      + +  D    + +  L   +   +LRRLKKD  +++P KTER++ V
Sbjct: 577  NFLMPGRFTIDQEIDFENQDEQQEEYIRHLHSRLQAFILRRLKKDVEKSLPSKTERILRV 636

Query: 1000 ELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----- 1054
            ELS +Q  YY+ +LTKNY  L    KG    S+LNI+ +L+K  NHPYL    E      
Sbjct: 637  ELSDVQTGYYKNILTKNYAALTAGAKG-GHFSLLNIMSELKKASNHPYLFDNAEERVLEK 695

Query: 1055 ---DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEF 1111
                  + E +    I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I+ 
Sbjct: 696  FGDGKKTRENILRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIK- 754

Query: 1112 GPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDF 1170
               T++R+DG+V    R+ +I  FN   S+  VFLLSTR+ GLGINL TADTVII+DSD+
Sbjct: 755  -GITFQRLDGTVPSAQRRISIDHFNAPDSKDDVFLLSTRAGGLGINLMTADTVIIFDSDW 813

Query: 1171 NPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NK 1223
            NP AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   +       NK
Sbjct: 814  NPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNK 873

Query: 1224 SGSQK-----EVEDILRWGTEELF 1242
               +      E+ +IL++G   +F
Sbjct: 874  YTKKNEPNPAELSEILKFGAGNMF 897


>gi|317155731|ref|XP_001825326.2| chromodomain helicase (Chd1) [Aspergillus oryzae RIB40]
          Length = 1513

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/651 (40%), Positives = 380/651 (58%), Gaps = 48/651 (7%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVI---------------- 654
            +EF +KW GKS+ H +W   ES     + R+L+NY  K     I                
Sbjct: 287  FEFYIKWQGKSHYHATWETAESLANCRSTRRLDNYIRKVLYEDIRLRQDEDVAPEDREKW 346

Query: 655  NICDER-------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
            N+  ER       +KQ +RVI+ R   +GT E  VKW  L YD CTWE  +E   E    
Sbjct: 347  NLDRERDVDAIEDYKQVERVIATREGDEGT-EYLVKWKRLFYDSCTWEN-EELVSEIAQC 404

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    +    D SE           +    A+   P  L+ G L   Q++ +N++
Sbjct: 405  EIDRFLNRSSRPPVSDKSE------SNPASRKSFEAIKGTPSFLRNGELKEFQVKGVNFM 458

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K++NV+LADEMGLGKTV   +FI+ L    + + P +V+VPLSTMP+W   F  W
Sbjct: 459  AFNWVKNRNVVLADEMGLGKTVQTVSFINWLRHVRRQQGPFVVVVPLSTMPSWAETFDNW 518

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P+LN V Y+G   AR ++R++E        ++      KFNVLLTTYE +L DSS L  
Sbjct: 519  TPDLNYVVYNGNEAARTVLREHELM------IDGNPRRPKFNVLLTTYEYVLLDSSFLSQ 572

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
              W+ + +DE HRLKN  S+L++ L  F    R+L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 573  FKWQFMAIDEAHRLKNRESQLYAKLLEFRSPARLLITGTPIQNNLAELSALLDFLNPGLV 632

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
               +  +   N    +QK+ EL K + P MLRR K     ++PPK E+++ VELS +Q E
Sbjct: 633  DIDADMD--LNAEAASQKLAELTKAIQPFMLRRTKSKVESDLPPKVEKIIRVELSDVQLE 690

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFLHEM 1065
            YY+ +LTKNY  L +  KG  +QS+LNI+M+L+K  NHP++ P  E     GS      +
Sbjct: 691  YYKNILTKNYAALNDGAKG-QKQSLLNIMMELKKASNHPFMFPNAEAKILDGSTRREDVL 749

Query: 1066 R--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
            R  I +S K+ LL  +L  L ++GHRVLIFSQM K+LD+L +Y+  EF   TY+R+DG++
Sbjct: 750  RAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGEYM--EFRGYTYQRLDGTI 807

Query: 1124 SVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
                R+ AI  +N    S F F+LSTR+ GLGINL TADTV+++DSD+NP AD+QAM RA
Sbjct: 808  PAASRRLAIEHYNAPGSSDFAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARA 867

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            HRIGQ++ + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  +I
Sbjct: 868  HRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEASEI 918


>gi|389741854|gb|EIM83042.1| hypothetical protein STEHIDRAFT_160649 [Stereum hirsutum FP-91666
            SS1]
          Length = 1484

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 280/679 (41%), Positives = 389/679 (57%), Gaps = 70/679 (10%)

Query: 614  FLVKWVGKSNIHNS-WIPESQLKVLAKRKLENYKAKYGTTVINICD-------------- 658
            F +KW G S++HN+  + E   +    ++++NY   Y      + +              
Sbjct: 269  FTIKWKGFSHLHNTDEVYEFLKRFKGLKRVDNYIKNYKIWQARLAEAVTSEDRESLLLEK 328

Query: 659  -------ERWKQPQRVISLRSSKDGTR-EAFVKWTGLPYDECTWEKLDEPALEKYSHLTD 710
                   E + + +RVIS R    GT  E FVKW GL Y+ CTWE + +      +   D
Sbjct: 329  ERDKEELETYCKVERVISHRVR--GTEPEYFVKWQGLNYEHCTWESMGQIK----TLAQD 382

Query: 711  LFVQF-ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK--GGALFPHQLEALNWL 767
            L   F ER+   K   +  L       Q+ + V + E P  +   GG L   QL  LNWL
Sbjct: 383  LVEAFREREAEAKFPFKSAL---YSRNQRPKFVKIMEDPPYITKTGGKLKDFQLTGLNWL 439

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W   +N ILADEMGLGKTV   AF+S L+ +     P LV+VPLST+  W ++FA W
Sbjct: 440  AYLWCHGENGILADEMGLGKTVQTVAFLSYLFHQMNQYGPFLVIVPLSTITAWQSQFATW 499

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            AP LNV+ Y G A AR IIR YE+  S     NKK    K NVLLTTYE+ L DS  L  
Sbjct: 500  APELNVITYIGTATAREIIRTYEFGPS-----NKK---LKMNVLLTTYELTLRDSKELGE 551

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+VL VDE HRLKNS S+L+  L SFS   ++L+TGTPLQNN+ E+ +L++FL P  F
Sbjct: 552  IKWQVLAVDEAHRLKNSESQLYEALRSFSAASKLLITGTPLQNNVKELLSLMHFLMPEKF 611

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
               + F+   ND     K++EL K +   MLRRLK+D + ++P K+ER++ VE+S +Q  
Sbjct: 612  ALTNEFD--LNDADHETKIQELHKQLESLMLRRLKRDVLTSLPTKSERILRVEMSGLQTH 669

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRI 1067
            +Y+ +LTKN+  L     G    S+LNI M+L+K  NHPYL  G E  + + E + +  +
Sbjct: 670  FYKNILTKNFSALVKSANGNNNISLLNIAMELKKAANHPYLFDGAEVKADANEEVLKGLV 729

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
              S K+ LL  +L  L  +GHRVLIFSQM ++LDIL DYL +      ++R+DG V+   
Sbjct: 730  MNSGKMVLLDKLLARLRSDGHRVLIFSQMVRMLDILTDYLTLR--GYQHQRLDGMVASEA 787

Query: 1128 RQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            R+ +I  FN   S  FVFLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM RAHRIG
Sbjct: 788  RKKSIAHFNAPGSPDFVFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIG 847

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK--------SG------------- 1225
            Q   + VYR V + +VEE +L+ AKKK++L+   +N+        SG             
Sbjct: 848  QKSHVSVYRFVSKDTVEEDVLERAKKKMVLEYAIINQMDTSQAHLSGKGGNVKDLAKPDN 907

Query: 1226 -SQKEVEDILRWGTEELFN 1243
             S+ E+  +L++G +++F+
Sbjct: 908  LSKDELTAVLKYGAQKMFD 926


>gi|356501409|ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1767

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 282/684 (41%), Positives = 407/684 (59%), Gaps = 68/684 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK-RKLENYKAK------YGTTV----INICD--- 658
            EFL+KW G+S++H  W   ++L+ L+  +K+ NY  K      Y  T+    I + D   
Sbjct: 473  EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDIRYRRTISREEIEVNDVSK 532

Query: 659  -------ERWKQPQRVISLRSSKDGTR----EAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                   ++  Q +R+I+ R S D +     E  VKW GL Y E TWEK  + A  +  H
Sbjct: 533  EMDLDIIKQNSQVERIIADRISNDNSGNVIPEYLVKWQGLSYAEATWEKDIDIAFAQ--H 590

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D +   E       A + ++   +    ++ +  L +QPE LKGG L  +QLE LN+L
Sbjct: 591  AIDEYKAREAAM----AVQGKMVDSQRKKSKASLRKLEKQPEWLKGGELRDYQLEGLNFL 646

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W    NVILADEMGLGKTV + + +  L    +   P LV+VPLST+ NW  EF  W
Sbjct: 647  VNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKW 706

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P++N++ Y G   +R + +QYE++     N  K     KFN LLTTYE++L D + L  
Sbjct: 707  LPDMNIIIYVGTRASREVCQQYEFY-----NEKKPGKPIKFNALLTTYEVVLKDKAVLSK 761

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W  L+VDE HRLKNS ++L++ L+ FS ++++L+TGTPLQN++ E++ LL+FL P  F
Sbjct: 762  IKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKF 821

Query: 948  PSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
             S   F + + +L++  + E   L   + PH+LRR+ KD  +++PPK ER++ VE+S +Q
Sbjct: 822  RSKDEFVQNYKNLSSFNENELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQ 881

Query: 1006 AEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHPYLIP----GTEPDSGSV 1059
             +YY+ +L +N+    N+ KGV   Q S+LNIV++L+K CNHP+L      G   DSGS 
Sbjct: 882  KQYYKWILERNFH---NLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGSS 938

Query: 1060 EFLHEMRIK-ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
            +     RI  +S KL +L  +L  L++  HRVLIFSQM ++LDIL +Y+++      ++R
Sbjct: 939  DNSKLERIVFSSGKLVILDKLLVKLHETKHRVLIFSQMVRMLDILGEYMSLR--GFQFQR 996

Query: 1119 VDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DGS     RQ A+  FN   S  F FLLSTR+ GLGINLATADTVII+DSD+NP  D+Q
Sbjct: 997  LDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 1056

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN--------------K 1223
            AM+RAHRIGQ + + +YR V   SVEE IL+ AKKK++LD L +               K
Sbjct: 1057 AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKK 1116

Query: 1224 SGS---QKEVEDILRWGTEELFND 1244
             GS   + E+  ILR+G EELF +
Sbjct: 1117 GGSYFDKNELSAILRFGAEELFKE 1140


>gi|301613323|ref|XP_002936158.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7, partial
            [Xenopus (Silurana) tropicalis]
          Length = 2908

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 276/665 (41%), Positives = 384/665 (57%), Gaps = 60/665 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTTVI------NICDERWKQPQ 665
            F VK+   S +H  W    +L+     ++K++ +KAK G          ++ +  + +  
Sbjct: 752  FYVKYKNYSYLHCHWATLEELEKDKRIQQKIKRFKAKQGQNKFLSEIEDDLFNPDYVEVD 811

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++ + +S D   E      VKW  LPY++ TWE    LD+  +E++  L         Q
Sbjct: 812  RILDVATSTDENGEPVCHYLVKWCSLPYEDSTWELKQDLDQAKIEEFEKL---------Q 862

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
            + + +    E P    D ++SE        E     +L  +QLE +NWL   W+  +N I
Sbjct: 863  SREPETERVERPPAD-DWKKSESSR-----EYKNNNSLREYQLEGVNWLLFNWYNKRNCI 916

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YHG
Sbjct: 917  LADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHG 974

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R  I+ YE +  DP     K  +YKF+ ++TT+EMIL D   LR + W  +V+DE 
Sbjct: 975  SQASRKTIQLYEMYFKDPQGKIIK-GAYKFHAIITTFEMILTDCPELRNIHWRCVVIDEA 1033

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L     +H+VLLTGTPLQN + E+++LLNFL+P  FPS S+F ++F 
Sbjct: 1034 HRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLNFLEPDRFPSESNFMQEFG 1093

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 1094 DLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFA 1153

Query: 1019 ILRNIGKG--VAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMR 1066
             L   G G      ++LN +M+LRK CNHPYLI G E           +    +F  +  
Sbjct: 1154 FLSKGGGGGHANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFRETHNCDPSDFQLQAM 1213

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVG 1126
             +A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG V   
Sbjct: 1214 TQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGRVRGN 1271

Query: 1127 DRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1185
             RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRI
Sbjct: 1272 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 1331

Query: 1186 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVEDI 1233
            GQSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED+
Sbjct: 1332 GQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDNATNGVQQLSKKEIEDL 1391

Query: 1234 LRWGT 1238
            LR G 
Sbjct: 1392 LRKGA 1396


>gi|358372937|dbj|GAA89538.1| chromodomain helicase [Aspergillus kawachii IFO 4308]
          Length = 1504

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/652 (40%), Positives = 381/652 (58%), Gaps = 50/652 (7%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVINICD---------ERW 661
            +EF +KW GKS+ H +W   ES     + R+L+NY  K  +  + + +         E+W
Sbjct: 278  FEFYIKWQGKSHYHATWETAESLANCRSTRRLDNYIRKTLSEDVRLKNDADVAPEDREKW 337

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                          KQ +RVI +R   +GT E FVKW  L YD CTWE  D  +      
Sbjct: 338  NLDRERDVDAIEDYKQVERVIGMREGDEGT-EYFVKWKRLFYDSCTWESEDLVSNIAQRE 396

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
            + D F+    +    D SE           +     +   P  L+ G L   Q++ +N++
Sbjct: 397  I-DRFLDRSSRPPVSDKSE------TNPATRKSFETIKSTPSFLQNGQLKEFQVKGVNFM 449

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K++NV+LADEMGLGKTV   AFI+ L    + + P +V+VPLSTMP+W   F  W
Sbjct: 450  AFNWVKNRNVVLADEMGLGKTVQTVAFINWLRHVRRQQGPFVVVVPLSTMPSWAETFDHW 509

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P+LN V Y+G   AR ++R++E        ++      KFNVLLTTYE +L DS+ L  
Sbjct: 510  TPDLNYVVYNGNEAARTVLREHELM------VDGNPRRPKFNVLLTTYEYVLLDSTFLSQ 563

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
              W+ + VDE HRLKN  S+L+  L  F    R+L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 564  FKWQFMAVDEAHRLKNRESQLYLKLLEFRSPARLLITGTPIQNNLAELSALLDFLNPGLV 623

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
               +  +   N    + K+ EL K + P MLRR K     ++PPKTE+++ VELS +Q E
Sbjct: 624  HIDADMD--LNAEAASHKLAELTKAIQPFMLRRTKSKVESDLPPKTEKIIRVELSDVQLE 681

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSV---EFL 1062
            YY+ +LTKNY  L +  +G  +QS+LNI+M+L+K  NHP++ P  E     GS    + L
Sbjct: 682  YYKNILTKNYAALNDGARG-QKQSLLNIMMELKKASNHPFMFPNAEARILEGSTRREDVL 740

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              M I +S K+ LL  +L  L ++GHRVLIFSQM K+LDIL DY+  EF   TY+R+DG+
Sbjct: 741  RAM-ITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYM--EFRGYTYQRLDGT 797

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ AI  +N   S  F F+LSTR+ GLGINL TADTV+++DSD+NP AD+QAM R
Sbjct: 798  IPAAARRLAIEHYNAPGSNDFAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMAR 857

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            AHRIGQ++ + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  +I
Sbjct: 858  AHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEASEI 909


>gi|83774068|dbj|BAE64193.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 1471

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/651 (40%), Positives = 380/651 (58%), Gaps = 48/651 (7%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVI---------------- 654
            +EF +KW GKS+ H +W   ES     + R+L+NY  K     I                
Sbjct: 245  FEFYIKWQGKSHYHATWETAESLANCRSTRRLDNYIRKVLYEDIRLRQDEDVAPEDREKW 304

Query: 655  NICDER-------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
            N+  ER       +KQ +RVI+ R   +GT E  VKW  L YD CTWE  +E   E    
Sbjct: 305  NLDRERDVDAIEDYKQVERVIATREGDEGT-EYLVKWKRLFYDSCTWEN-EELVSEIAQC 362

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    +    D SE           +    A+   P  L+ G L   Q++ +N++
Sbjct: 363  EIDRFLNRSSRPPVSDKSE------SNPASRKSFEAIKGTPSFLRNGELKEFQVKGVNFM 416

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K++NV+LADEMGLGKTV   +FI+ L    + + P +V+VPLSTMP+W   F  W
Sbjct: 417  AFNWVKNRNVVLADEMGLGKTVQTVSFINWLRHVRRQQGPFVVVVPLSTMPSWAETFDNW 476

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P+LN V Y+G   AR ++R++E        ++      KFNVLLTTYE +L DSS L  
Sbjct: 477  TPDLNYVVYNGNEAARTVLREHELM------IDGNPRRPKFNVLLTTYEYVLLDSSFLSQ 530

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
              W+ + +DE HRLKN  S+L++ L  F    R+L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 531  FKWQFMAIDEAHRLKNRESQLYAKLLEFRSPARLLITGTPIQNNLAELSALLDFLNPGLV 590

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
               +  +   N    +QK+ EL K + P MLRR K     ++PPK E+++ VELS +Q E
Sbjct: 591  DIDADMD--LNAEAASQKLAELTKAIQPFMLRRTKSKVESDLPPKVEKIIRVELSDVQLE 648

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFLHEM 1065
            YY+ +LTKNY  L +  KG  +QS+LNI+M+L+K  NHP++ P  E     GS      +
Sbjct: 649  YYKNILTKNYAALNDGAKG-QKQSLLNIMMELKKASNHPFMFPNAEAKILDGSTRREDVL 707

Query: 1066 R--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
            R  I +S K+ LL  +L  L ++GHRVLIFSQM K+LD+L +Y+  EF   TY+R+DG++
Sbjct: 708  RAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGEYM--EFRGYTYQRLDGTI 765

Query: 1124 SVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
                R+ AI  +N    S F F+LSTR+ GLGINL TADTV+++DSD+NP AD+QAM RA
Sbjct: 766  PAASRRLAIEHYNAPGSSDFAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARA 825

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            HRIGQ++ + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  +I
Sbjct: 826  HRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEASEI 876


>gi|448112637|ref|XP_004202147.1| Piso0_001627 [Millerozyma farinosa CBS 7064]
 gi|359465136|emb|CCE88841.1| Piso0_001627 [Millerozyma farinosa CBS 7064]
          Length = 1377

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 292/724 (40%), Positives = 401/724 (55%), Gaps = 83/724 (11%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKY-----------GTTVINI- 656
            + Y F +KW   S++HN+W   S LK     R++ENY  +Y            TT  +I 
Sbjct: 177  LDYLFKIKWSDTSHLHNTWEACSTLKNYKGFRRVENYIKQYIVLDQEIRKDPSTTSEDIE 236

Query: 657  -----------CDERWKQPQRVI-SLRSSKDGTR--EAFVKWTGLPYDECTWEKLDEPAL 702
                         E + + +R++ S R   DG    + F KW  L YDEC+WE  +  A 
Sbjct: 237  AMDIELERRRDEQEEYTKVERIVDSERVEVDGQSKLQYFCKWRRLYYDECSWEDAERIAE 296

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLE 762
                 +T    +   + L        L       Q+     L +QP  +K G L   QL 
Sbjct: 297  IAPEQVTKYQQRLNSKILP------HLSANYPHNQRPRFEKLVKQPLFIKNGELRDFQLT 350

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNW+   W +++N ILADEMGLGKTV   +F+S L    +   P LV+VPLST+ +W  
Sbjct: 351  GLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIYARRQNGPHLVVVPLSTITSWQE 410

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
             F  WAP++N V Y G + AR  IR YE++       NKK    KFN+LLTTYE +L D 
Sbjct: 411  TFEKWAPDVNCVYYLGNSAARKTIRDYEFYQ------NKKL---KFNILLTTYEYVLKDR 461

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            S L  + W+ L VDE HRLKN  S L+  L SF   +R+L+TGTPLQNNI E+  L NFL
Sbjct: 462  SELGSIKWQFLAVDEAHRLKNEESSLYESLKSFKVGNRLLITGTPLQNNIKELNALCNFL 521

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F      + +  +    Q +++L+K + P +LRRLKKD  +++P K+ER++ VELS
Sbjct: 522  MPGRFNIGQEIDFETPNREQEQYIKDLQKNIQPFILRRLKKDVEKSLPSKSERILRVELS 581

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE------PDS 1056
             +Q EYYR +LTKNY  L N G   +Q S+LN+V +L+K  NHPYL  G E        S
Sbjct: 582  DLQTEYYRNILTKNYSAL-NAGNKGSQISLLNVVSELKKASNHPYLFDGAEERALAKASS 640

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
             S + +    I +S K+ LL  +L  L KEGHRVLIFSQM ++LDIL DYL+I+     +
Sbjct: 641  TSRDNILRGIIMSSGKMVLLEQLLNRLKKEGHRVLIFSQMVRMLDILGDYLSIK--GLQF 698

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            +R+DG V    R+ +I  FN   S+ FVFLLSTR+ GLGINL TADTVII+DSD+NP AD
Sbjct: 699  QRLDGGVPSSQRRISIDHFNAPDSKDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQAD 758

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD----QLFVNKSGSQK--- 1228
            +QAM RAHRIGQ   + VYR V + ++EE IL+ A+KK++L+     L +    SQK   
Sbjct: 759  LQAMARAHRIGQKNHVSVYRFVSKDTIEEEILERARKKMILEYAIISLGITDKTSQKSKS 818

Query: 1229 -----EVEDILRWGTEELF--NDSPG-----------------INGKDMGENNTSIEEAV 1264
                 E+ +IL++G   +F  ND+                   +   D+GE+N   EE +
Sbjct: 819  EPSTGELSEILKFGAGNMFKANDNQKKLEDLNLDDVLKHAEDHVTTPDLGESNLGSEEFL 878

Query: 1265 RDLE 1268
            +  E
Sbjct: 879  KQFE 882


>gi|241948531|ref|XP_002416988.1| ATP-dependent chromodomain helicase, putative; chromodomain protein
            1, putative [Candida dubliniensis CD36]
 gi|223640326|emb|CAX44576.1| ATP-dependent chromodomain helicase, putative [Candida dubliniensis
            CD36]
          Length = 1406

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 281/682 (41%), Positives = 386/682 (56%), Gaps = 65/682 (9%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKY----------------GTTVI 654
            Y F +KW   S++HN+W     LK     RKL+NY  ++                    +
Sbjct: 192  YLFKIKWTDASHLHNTWEKYQDLKSFKGFRKLDNYIKQFIIYDDEIRNDPLTTKEDLEAM 251

Query: 655  NICDER-------WKQPQRVI-SLRSSKDGTR---EAFVKWTGLPYDECTWEKLDEPALE 703
            +I  ER       +   +R++ S R   D      + FVKW  L YDEC+WE   E A  
Sbjct: 252  DIERERKRDEQEEYTHVERIVDSERVETDDGETKLQYFVKWKRLYYDECSWEDAKEIAKI 311

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEA 763
                +T    +   + L   ++   L       Q+     L +QP  +K G L   QL  
Sbjct: 312  APEQVTKYQQRLNSKILPSLSANYPL------SQRPRFEKLFKQPVFIKNGELRDFQLTG 365

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LNW+   W +++N ILADEMGLGKTV   AF+S L    +   P LV+VPLST+P W   
Sbjct: 366  LNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHLVVVPLSTVPAWQET 425

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F  WAP++N V Y G  +AR  +R+YE +     N N K    KFNVLLTTYE IL D +
Sbjct: 426  FEKWAPDVNCVYYMGNGEARKTVREYELY-----NQNNKP---KFNVLLTTYEYILKDRT 477

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             L    W+ L VDE HRLKN+ S L+  L SF   +R+L+TGTPLQNN+ E+  L NFL 
Sbjct: 478  ELGAFKWQFLAVDEAHRLKNAESSLYEALKSFRVSNRLLITGTPLQNNVKELAALCNFLM 537

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            P  F      + +  D    Q +++L+K ++P +LRRLKKD  +++P K+ER++ VELS 
Sbjct: 538  PGKFTIDQEIDFETIDSEQEQYIKDLQKKISPFILRRLKKDVEKSLPSKSERILRVELSD 597

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLH 1063
            IQ EYY+ ++TKNY  L N G   +Q S+LNI+ +L+K  NHPYL  G E      E  H
Sbjct: 598  IQTEYYKNIITKNYAAL-NAGNRGSQISLLNIMSELKKASNHPYLFDGAEEKVLDKEGSH 656

Query: 1064 EMR------IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
                     + +S K+ LL  +L  L KEGHRVLIFSQM ++LDIL DY+ I+     ++
Sbjct: 657  SRENTLKGIVMSSGKMVLLEQLLSRLKKEGHRVLIFSQMVRMLDILGDYMFIK--GYQFQ 714

Query: 1118 RVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG+V    R+ AI  FN   S+ F FLLSTR+ GLGINL TADTVII+DSD+NP AD+
Sbjct: 715  RLDGTVPSSKRKIAIDHFNALGSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADL 774

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN--------KSGSQ- 1227
            QAM RAHRIGQ   + VYR V + +VEE+IL+ A+KK++L+   ++        KS S+ 
Sbjct: 775  QAMARAHRIGQKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIISLGITDPNAKSSSKT 834

Query: 1228 ----KEVEDILRWGTEELFNDS 1245
                 E+  IL++G   +F ++
Sbjct: 835  EPSTNELSQILKFGAGTMFKEN 856


>gi|195386402|ref|XP_002051893.1| GJ17250 [Drosophila virilis]
 gi|194148350|gb|EDW64048.1| GJ17250 [Drosophila virilis]
          Length = 5552

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 386/667 (57%), Gaps = 60/667 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL-----KVLAK-RKLENYKAKYGTTVINICDERWK---- 662
            E+ VK+   S +H  W  E +L     +V AK R+ +  +A+      NI +E +     
Sbjct: 2064 EYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQAQQINIFENIEEEPFNPDFV 2123

Query: 663  QPQRVISL-----RSSKDGTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQ 714
            +  RV+ +      +S + T+   VKW  LPY++CTWE    +D   +E+Y     + ++
Sbjct: 2124 EVDRVLDMSVHTDENSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPLR 2183

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKS 774
             E ++ K+   E             +   L + P    G +L P+QLE LNWL+  W+ S
Sbjct: 2184 CEWKSRKRPHPE-------------QWKKLEKTPVYKSGNSLRPYQLEGLNWLKFSWYNS 2230

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
             N ILADEMGLGKT+ +  F+ S+Y E+  + P LV+ PLST+PNW  EF  W  ++NVV
Sbjct: 2231 HNCILADEMGLGKTIQSLTFVHSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWT-DMNVV 2288

Query: 835  EYHGCAKARAIIRQYE-WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
             YHG   ++ +I+ YE ++ +D   + K+    KFNVL+TT+EMI+ D   L+   W + 
Sbjct: 2289 VYHGSVTSKQMIQDYEFYYKTDSGKVLKEP--IKFNVLITTFEMIVTDYMDLKAFNWRLC 2346

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
            V+DE HRLKN   KL   L   S +HRVLL+GTPLQNNI E+++LLNFL+P+ F S   F
Sbjct: 2347 VIDEAHRLKNRNCKLLEGLRQLSLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEF 2406

Query: 954  EEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAML 1013
              +F  L T ++V +L+ L+ P MLRRLK D  +++ PK E ++ VEL++IQ +YYR +L
Sbjct: 2407 MSEFGSLRTEEEVNKLQVLLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGIL 2466

Query: 1014 TKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---------SGSVEFLHE 1064
             +N+  L+         +++N +M+LRK C HPYL+ G E               E  ++
Sbjct: 2467 EQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKAQHGEDPESYYK 2526

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I ++ K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +ER+DG + 
Sbjct: 2527 NLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYP--FERIDGRIR 2584

Query: 1125 VGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQ AI R+++  S RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  R H
Sbjct: 2585 GNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCH 2644

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKSGSQKEVE 1231
            RIGQ K + +YRL+ R + E  +   A  KL LD+  +            NK  S+KE+E
Sbjct: 2645 RIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTHGSKDGNNKQLSKKEIE 2704

Query: 1232 DILRWGT 1238
            D+L+ G 
Sbjct: 2705 DLLKKGA 2711


>gi|328722605|ref|XP_001946846.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
            [Acyrthosiphon pisum]
          Length = 1670

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/684 (39%), Positives = 396/684 (57%), Gaps = 72/684 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENY-----------------KAKYGTT 652
            +FL+KW G S+IHN+W   + L   KV   +K++N+                  ++Y   
Sbjct: 233  QFLIKWKGWSHIHNTWESMNSLLAQKVKGLKKIDNFVKREDSISAWRNQMTAEDSEYYEC 292

Query: 653  VINICDERWKQP---QRVISLRSSKDGTREAFVKWTGLPYDECTWEK---LDEPALEKYS 706
             + +  +  K     +R+I   S     +E +VKW  LPY + TWE    ++    +K  
Sbjct: 293  QLELQQDLLKSYNIVERIIG-ESKNPAQKEYYVKWQSLPYSDATWEVASLIERKWPQKIK 351

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG----ALFPHQLE 762
               D      R+  K+  S+      K    + + V L E+PE   G      L  +QL 
Sbjct: 352  EFRD------REGSKRTPSK----ACKALKYRPKFVQLAEEPEYFGGYDEKLILRDYQLH 401

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             +NWL   W K  +VILADEMGLGKT+    F+  L+  ++   P LV+VPLSTMP+W  
Sbjct: 402  GVNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFHNYQMHGPFLVVVPLSTMPSWQR 461

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            EF+LWAP++N+V Y G  ++R IIR+ EW       L       KFN +LTTYE++L DS
Sbjct: 462  EFSLWAPDINIVTYIGDVESRNIIRETEWCFESSKRL-------KFNAILTTYEIVLKDS 514

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
              L  + W VL+VDE HRLKN  S L+  L  F    R+L+TGTPLQN++ E++ LL+F+
Sbjct: 515  LLLNSLSWAVLMVDEAHRLKNDDSLLYKALQGFDTNQRLLITGTPLQNSLKELWALLHFI 574

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F +   FE   +D   ++   +L + + P++LRR+KKD  +++P K E+++ VE++
Sbjct: 575  MPGKFDNWEEFEH-MHDNAASKGYTKLHRQLEPYILRRVKKDVEKSLPAKVEQILRVEMT 633

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL 1062
             +Q +YY+ +LTKNY  LR   KG +  + LNI+++L+K CNH  L    E ++ + + L
Sbjct: 634  PVQRKYYKWILTKNYNALRKGSKG-SSTTFLNIMIELKKCCNHALLTKPQENENTADDNL 692

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              + ++ S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL+    P  ++R+DGS
Sbjct: 693  QGL-LRGSGKLMLLDKLLVRLRETGHRVLIFSQMVRMLDILAEYLSYRHLP--FQRLDGS 749

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA  R
Sbjct: 750  IKGDIRRQALEHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQAR 809

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS--------------- 1226
            AHRIGQ  ++ +YRLV + SVEE I++ AK+K++LD L + +  +               
Sbjct: 810  AHRIGQKNQVNIYRLVTKGSVEEDIVERAKQKMVLDHLVIQRMDTTGRTVLDKKAKNASI 869

Query: 1227 ---QKEVEDILRWGTEELFNDSPG 1247
               + E+  IL++G EELF D PG
Sbjct: 870  PFNKDELTAILKFGAEELFKDDPG 893


>gi|296414511|ref|XP_002836943.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295632788|emb|CAZ81134.1| unnamed protein product [Tuber melanosporum]
          Length = 1444

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/663 (40%), Positives = 387/663 (58%), Gaps = 57/663 (8%)

Query: 613  EFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAK------YGTT--------VINIC 657
            +F +KW G S+ H++W   E+       RKL+NY  K      Y  T        V N+ 
Sbjct: 268  QFYIKWQGLSHYHSTWETAEALAGCKGIRKLDNYMKKVVLEDYYARTNPFITREEVENMT 327

Query: 658  DER---------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
             ER         +   +RVI  + +++G RE  +KW  L Y+ CTWE             
Sbjct: 328  LERERLRESLAEFVHVERVIGDQVNEEGNREYMIKWKRLAYENCTWES------------ 375

Query: 709  TDLFVQFERQTLKK-DASEDELPRGK---GDCQ-QSEIVALTEQPEELKGGALFPHQLEA 763
             +L  +     + K    E  LP  K    D + +     L  QP  +KGG L   Q++ 
Sbjct: 376  AELITEIAPDEIDKYRVREKTLPYSKKSESDVRTRRPYKKLEGQPSYIKGGELRDFQMKG 435

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LNWL   W    N ILADEMGLGKTV   AF+S L  +     P LV+VPLST+P+W   
Sbjct: 436  LNWLAYNWTNGNNGILADEMGLGKTVQTVAFMSWLRHDRHQHGPFLVVVPLSTVPSWAET 495

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
               WAP++N + Y G  KAR +IR+YE  A DP       +  KFN ++TTYE IL D +
Sbjct: 496  LENWAPDMNFIVYTGTGKAREVIRKYEMFA-DPG-----MTKVKFNCMVTTYEYILNDFA 549

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             L  + W+ L VDE HRLKN  S L+  LN F    R+L+TGTPLQNN+ E+  L++FL 
Sbjct: 550  TLGNIKWQFLAVDEAHRLKNKESALYDKLNVFKAPCRLLITGTPLQNNLKELGALVDFLM 609

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            P      +  + +  D    +++E+L++ + P+MLRR+KK   +++P KTE+++ VELS 
Sbjct: 610  PGKISIDNDVDLQSKD--AGRQIEQLQQALKPYMLRRVKKSVEKSLPGKTEKIIRVELSD 667

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----DSGSV 1059
            +Q EYY+A++T+NY  L N G    +QS+LNIVM+L+K+ NHP++ P  E      S   
Sbjct: 668  VQTEYYKAIITRNYAAL-NAGATGPKQSLLNIVMELKKISNHPFMFPPAEQRILGGSNRR 726

Query: 1060 EFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
            E + +  I +S K+ LL  +L  L  + HRVL+FSQM  +LDIL DYLN++    +++R+
Sbjct: 727  EDVLKALIMSSGKMVLLDQLLTKLKADNHRVLVFSQMVHMLDILADYLNLKGF--SFQRL 784

Query: 1120 DGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DG+++ G R+ AI  FN  +S  F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QA
Sbjct: 785  DGTIAAGPRRIAIDHFNAPESPDFCFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQA 844

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGT 1238
            M RAHRIGQ   ++VYRLV + ++EE +L+ A+ K++L+ L ++   + K + D ++  T
Sbjct: 845  MARAHRIGQKAHVMVYRLVSKDTIEEEVLERARNKMILEHLVISLGVTDKGITDKVKKKT 904

Query: 1239 EEL 1241
            + L
Sbjct: 905  DRL 907


>gi|170034569|ref|XP_001845146.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus]
 gi|167875927|gb|EDS39310.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus]
          Length = 5423

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 269/667 (40%), Positives = 378/667 (56%), Gaps = 63/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENY--KAKYGTTVINICDERWKQPQRV 667
            E+ VK+   S +H  W  E +L    KR   K++ +  K +    +    DE    P  V
Sbjct: 2011 EYYVKYRNFSYLHCEWRTEDELFKGDKRVGNKIKRFLQKQQQQLNIFESLDEEPFNPDFV 2070

Query: 668  -------ISLRSSKDG--TREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
                   +S  +  DG   +   VKW  LPY++ TWE    +D P +E+Y     +  + 
Sbjct: 2071 EVDRVLDVSEHTDDDGKTVKHYLVKWKSLPYEDSTWELEDDVDLPKIEQYYRFNKIPPRS 2130

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSK 775
            E +T K+   +             +  AL + P    G +L P+QLE LNWLR  W+K  
Sbjct: 2131 EWKTKKRPHPD-------------QWKALPQSPIYKAGNSLRPYQLEGLNWLRYSWYKGN 2177

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ +  F+ S+Y E+  + P LV+ PLST+PNW  EF  W  ++NV+ 
Sbjct: 2178 NCILADEMGLGKTIQSLTFVHSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWT-DMNVIV 2235

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG A +R +I+ YE +    +N        KFNVL+TT+EMI+ D   L+   W   V+
Sbjct: 2236 YHGSANSRQMIQDYEVYYRY-ENGKYIKDINKFNVLITTFEMIVTDYQDLKPYNWRACVI 2294

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L   + +HRVLL+GTPLQNN+ E+++LLNFL+P+ F     F  
Sbjct: 2295 DEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPSQFSCNEEFLR 2354

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
            +F  L T  +V +L+ L+ P MLRRLK D  +++ PK E +V VEL++IQ +YYR +L +
Sbjct: 2355 EFGSLKTESEVLKLQALLKPMMLRRLKDDVEKSLAPKEETIVEVELTNIQKKYYRGILEQ 2414

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMR--------- 1066
            N+  L          +++N +M+LRK C HPYL+ G E     +++ + M+         
Sbjct: 2415 NFSFLMKGTTSANIPNLMNTMMELRKCCIHPYLLNGAE---DQIQYDYRMQHGEDAEAYY 2471

Query: 1067 ---IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
               + +S K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +ER+DG +
Sbjct: 2472 KNLVVSSGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLIYRKYP--FERIDGRI 2529

Query: 1124 SVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
                RQAAI R+++ D  RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  R 
Sbjct: 2530 RGNLRQAAIDRYSKPDSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARC 2589

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQ-----KEV 1230
            HRIGQ K + +YRL+ R + E  +   A  KL LD+  +       NK GSQ     KE+
Sbjct: 2590 HRIGQQKMVKIYRLLCRNTYEREMFDKASMKLGLDKAILQSMNTSQNKDGSQKQLSKKEI 2649

Query: 1231 EDILRWG 1237
            ED+L+ G
Sbjct: 2650 EDLLKKG 2656


>gi|32563629|ref|NP_491994.2| Protein CHD-1 [Caenorhabditis elegans]
 gi|25004979|emb|CAB07481.2| Protein CHD-1 [Caenorhabditis elegans]
          Length = 1461

 Score =  468 bits (1204), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 273/699 (39%), Positives = 403/699 (57%), Gaps = 87/699 (12%)

Query: 604  QVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVL-AK--RKLENYKAKYGTTVI------ 654
            Q+ G     +F VKW G S++HN+W  E+ L ++ AK  +K++NY  K     +      
Sbjct: 229  QIPGDKTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSAD 288

Query: 655  ---------------NICDERWKQPQRVISLRSSKDGT------REAFVKWTGLPYDECT 693
                            +C+E +K+ +RV++ ++S+D         E  +KW+GLPY +CT
Sbjct: 289  KEYIEFFECEQQMAEELCEE-YKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCT 347

Query: 694  WE--KLDEP-ALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEE 750
            WE  K+  P  ++ Y H          + LK       + R +   ++ E +     P+ 
Sbjct: 348  WEDEKMVAPEQIKAYYHRI--------ENLKSPNKNSNVLRKRPKFEKFESM-----PDF 394

Query: 751  LKGGA-----LFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAK 805
            LK        L  +QLE LNW+   W K  + ILADEMGLGKT+ + + ++SL+  +   
Sbjct: 395  LKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLA 454

Query: 806  LPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSS 865
             P LV+VPLSTM  W  EFA WAP +N+V Y G   +R +IRQYEW           T  
Sbjct: 455  GPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGG-------TKK 507

Query: 866  YKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTG 925
             K N +LTTYE++L D + L  + W  L+VDE HRLKN  S L+  L  F F H++L+TG
Sbjct: 508  MKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITG 567

Query: 926  TPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDA 985
            TPLQN++ E++ LL+F+ P  F     FE   N+ +  + +  L K + P +LRR+KKD 
Sbjct: 568  TPLQNSLKELWALLHFIMPEKFDCWEEFETAHNE-SNHKGISALHKKLEPFLLRRVKKDV 626

Query: 986  MQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGV--AQQSMLNIVMQLRKVC 1043
             +++PPKTE+++ V++++ Q ++Y+ +LTKNY   R + KGV  +    +N+VM+L+K C
Sbjct: 627  EKSLPPKTEQILRVDMTAHQKQFYKWILTKNY---RELSKGVKGSINGFVNLVMELKKCC 683

Query: 1044 NHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDIL 1103
            NH  L    +      +   +  +K+S KL LL  +L  L  +GHRVLIFSQM  +LDIL
Sbjct: 684  NHASLTRQYDHIYDDAQGRLQQLLKSSGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDIL 743

Query: 1104 EDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADT 1162
            ++YL +   P   +R+DGS+    R+ A+  +N   S  F FLLSTR+ GLGINLATADT
Sbjct: 744  QEYLQLRRFPS--QRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADT 801

Query: 1163 VIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1222
            VII+DSD+NP  D+QAM+RAHRIGQ+K + +YRLV + SVEE I++ AK+KL+LD L + 
Sbjct: 802  VIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQ 861

Query: 1223 K---------------SGS----QKEVEDILRWGTEELF 1242
            +               SGS    ++E+  IL++G  ELF
Sbjct: 862  RMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVELF 900


>gi|195035285|ref|XP_001989108.1| GH10228 [Drosophila grimshawi]
 gi|193905108|gb|EDW03975.1| GH10228 [Drosophila grimshawi]
          Length = 5820

 Score =  468 bits (1204), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 386/666 (57%), Gaps = 60/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL-----KVLAK-RKLENYKAKYGTTVINICDERWK---- 662
            E+ VK+   S +H  W  E +L     +V AK R+ +  +A+      NI +E +     
Sbjct: 2161 EYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQAQQINIFENIEEEPFNPDFV 2220

Query: 663  QPQRVISL-----RSSKDGTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQ 714
            +  RV+ +      +S + T+   VKW  LPY++CTWE    +D   +E+Y     + ++
Sbjct: 2221 EVDRVLDMSVHTDENSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPLR 2280

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKS 774
             E ++ K+   E             +   L + P    G +L P+QLE LNWL+  W+ S
Sbjct: 2281 CEWKSRKRPHPE-------------QWKKLEKTPIYKSGNSLRPYQLEGLNWLKFSWYNS 2327

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
             N ILADEMGLGKT+ +  F+ S+Y E+  + P LV+ PLST+PNW  EF  W  ++NVV
Sbjct: 2328 HNCILADEMGLGKTIQSLTFVHSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWT-DMNVV 2385

Query: 835  EYHGCAKARAIIRQYE-WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
             YHG   ++ +I+ YE ++ +D   + K+    KFNVL+TT+EMI+ D   L+   W + 
Sbjct: 2386 VYHGSLTSKQMIQDYEFYYKTDSGKVLKEP--IKFNVLITTFEMIVTDYMDLKQFNWRLC 2443

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
            V+DE HRLKN   KL   L   S +HRVLL+GTPLQNNI E+++LLNFL+P+ F S   F
Sbjct: 2444 VIDEAHRLKNRNCKLLEGLRQLSLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEF 2503

Query: 954  EEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAML 1013
              +F  L T ++V +L+ L+ P MLRRLK D  +++ PK E ++ VEL++IQ +YYR +L
Sbjct: 2504 MSEFGSLRTEEEVNKLQVLLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGIL 2563

Query: 1014 TKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---------SGSVEFLHE 1064
             +N+  L+         +++N +M+LRK C HPYL+ G E               E  ++
Sbjct: 2564 EQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKAQHGEDPESYYK 2623

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I ++ K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +ER+DG + 
Sbjct: 2624 NLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYP--FERIDGRIR 2681

Query: 1125 VGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQ AI R+++  S RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  R H
Sbjct: 2682 GNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCH 2741

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKSGSQKEVE 1231
            RIGQ K + +YRL+ R + E  +   A  KL LD+  +            NK  S+KE+E
Sbjct: 2742 RIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTHGSKDGNNKQLSKKEIE 2801

Query: 1232 DILRWG 1237
            D+L+ G
Sbjct: 2802 DLLKKG 2807


>gi|221330583|ref|NP_001137761.1| kismet, isoform C [Drosophila melanogaster]
 gi|220901895|gb|ACL82968.1| kismet, isoform C [Drosophila melanogaster]
          Length = 5517

 Score =  468 bits (1203), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/673 (39%), Positives = 384/673 (57%), Gaps = 74/673 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL-----KVLAK-RKLENYKAKYGTTVINICDERWKQP-- 664
            E+ VK+   S +H  W  E +L     +V AK R+ +  +++      NI DE + Q   
Sbjct: 1881 EYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFENIEDEPFNQDFT 1940

Query: 665  --QRVISL-----RSSKDGTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQ 714
               RV+ +      +S + T+   VKW  LPY++CTWE    +D   +E+Y     +  +
Sbjct: 1941 EVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPQR 2000

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHK 773
             E ++ K+                 E+    E+    KGG +L P+QLE LNWL+  W+ 
Sbjct: 2001 SEWKSKKR--------------PHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYN 2046

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
            + N ILADEMGLGKT+ +  F+ S+Y E+  + P LV+ PLST+PNW  EF  W  ++NV
Sbjct: 2047 THNCILADEMGLGKTIQSLTFVHSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWT-DMNV 2104

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSS-------YKFNVLLTTYEMILADSSHLR 886
            V YHG   ++ +I+ YE++         KT S        KFNVL+TT+EMI+ D   L+
Sbjct: 2105 VVYHGSVTSKQMIQDYEYYY--------KTESGKVLKEPIKFNVLITTFEMIVTDYMDLK 2156

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
               W + V+DE HRLKN   KL   L   + +HRVLL+GTPLQNNI E+++LLNFL+P+ 
Sbjct: 2157 AFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQ 2216

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQA 1006
            F S   F  +F  L T ++V +L+ L+ P MLRRLK D  +++ PK E ++ VEL++IQ 
Sbjct: 2217 FSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQK 2276

Query: 1007 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---------SG 1057
            +YYR +L +N+  L+         +++N +M+LRK C HPYL+ G E             
Sbjct: 2277 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGE 2336

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
              E  ++  I ++ K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +E
Sbjct: 2337 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYP--FE 2394

Query: 1118 RVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG +    RQ AI R+++  S RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+
Sbjct: 2395 RIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDL 2454

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKS 1224
            QA  R HRIGQ K + +YRL+ R + E  +   A  KL LD+  +            NK 
Sbjct: 2455 QAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQ 2514

Query: 1225 GSQKEVEDILRWG 1237
             S+KE+ED+L+ G
Sbjct: 2515 LSKKEIEDLLKKG 2527


>gi|149244356|ref|XP_001526721.1| chromo domain protein 1 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146449115|gb|EDK43371.1| chromo domain protein 1 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 1500

 Score =  468 bits (1203), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 283/728 (38%), Positives = 401/728 (55%), Gaps = 83/728 (11%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAK---YGTTVIN---------- 655
            + Y F +KW   S++HN+W     LK     RK++NY  +   Y   V N          
Sbjct: 243  LDYLFKIKWSDASHMHNTWETYKDLKEYKGFRKVDNYIKQFIIYDNEVRNDPLTTKEDIE 302

Query: 656  ----------ICDERWKQPQRVI-SLRSSKDGTR---EAFVKWTGLPYDECTWEKLDEPA 701
                         E +   +R++ S R  KD ++   E FVKW  L YDEC+WE  +E A
Sbjct: 303  AMDIERERRRDEQEEYTHVERIVDSQRVEKDDSQTRLEYFVKWKRLYYDECSWEDAEEIA 362

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQL 761
                  +     +   +     ++   +        + +   LT+QP  +K G L   QL
Sbjct: 363  KIAPEQVKKFQQRLNSKIFPHQSATYSV------VNRPKFEKLTKQPIFIKNGELRDFQL 416

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
              LNW+   W +++N ILADEMGLGKTV   AF+S L    +   P LV+VPLST+P W 
Sbjct: 417  TGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIFSRRQYGPHLVVVPLSTIPAWQ 476

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
              F  WAP++N V Y G  +AR  IR+YEW+ +      +K    KFN+LLTTYE IL D
Sbjct: 477  ETFEKWAPDVNCVYYLGNGEARKTIREYEWYTTGGSGGGRKP---KFNILLTTYEYILKD 533

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
             + L    W+ L VDE HRLKN+ S L+  L SF   +++L+TGTPLQNN+ E+  L +F
Sbjct: 534  RAELGSFKWQFLAVDEAHRLKNAESSLYESLKSFKCANKLLITGTPLQNNMKELAALCDF 593

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L P  F      +    D      +++L+K + P +LRRLKKD   ++P KTER++ VEL
Sbjct: 594  LMPGKFSIEQEIDFDTPDEDQELYIKDLQKKINPFILRRLKKDVETSLPGKTERILRVEL 653

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE------PD 1055
            S IQ +YY+ ++TKNY  L N G   +Q S+LN++ +L+K  NHPYL  G E        
Sbjct: 654  SDIQTDYYKNIITKNYAAL-NAGNKGSQISLLNVMSELKKASNHPYLFDGAEERVLSRAG 712

Query: 1056 SGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKT 1115
            S S E + +  + +S K+ LL  +L  L KEGHRVLIFSQM ++LDIL DY++I+     
Sbjct: 713  SYSRENVLKGMVMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRMLDILGDYMSIK--GYA 770

Query: 1116 YERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHA 1174
            ++R+DG +    R+ +I  FN   S+ F FLLSTR+ GLGINL TADTVII+DSD+NP A
Sbjct: 771  FQRLDGGIPSSQRRISIDHFNAPDSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQA 830

Query: 1175 DIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN------------ 1222
            D+QAM RAHRIGQ  ++LVYR V + +VEE+IL+ A+KK++L+   ++            
Sbjct: 831  DLQAMARAHRIGQKNQVLVYRFVSKDTVEEQILERARKKMILEYAIISLGITDPSAKKNS 890

Query: 1223 ---KSGSQKEVEDILRWGTEELFNDSPG-------------------INGKDMGENNTSI 1260
                SGS  E+  IL++G   +F D+                     +   D+GE+N   
Sbjct: 891  KAEPSGS--ELSQILKFGAGTMFKDNDNQQKLENLNLDDVLNHAEDHVTTPDLGESNLGS 948

Query: 1261 EEAVRDLE 1268
            EE ++  E
Sbjct: 949  EEFLKQFE 956


>gi|402077957|gb|EJT73306.1| chromodomain helicase DNA binding protein [Gaeumannomyces graminis
            var. tritici R3-111a-1]
          Length = 1691

 Score =  468 bits (1203), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/654 (40%), Positives = 383/654 (58%), Gaps = 61/654 (9%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAK---------YGTTVINICDERW 661
            +E+ +KW GKS++H++W   ES       R+LENY  K         +G  V     E+W
Sbjct: 297  FEYFIKWQGKSHLHDTWETTESVNGCRGFRRLENYFRKIVEYSLDMEFGYDVSPEQREQW 356

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                           + +RV+++R   +G  E FVKW GL YDECTWE  D  + E    
Sbjct: 357  LLDREREQDALDDFTKVERVVAVRDGDEGD-EYFVKWKGLQYDECTWEAEDLISGEAQDK 415

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
            + D F++   ++ + D  E        D + + +  L +QP+ ++ G L   QL+ LN+L
Sbjct: 416  I-DQFLERSSRSWQSDRKE-----SNADTR-TRMTKLEKQPDYIQNGELREFQLKGLNFL 468

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W ++ NVILADEMGLGKTV   +F+S L      + P LV+ PLS +P W   F  W
Sbjct: 469  ALNWTRANNVILADEMGLGKTVQTVSFLSWLRNSRDQEGPFLVVAPLSVIPAWCDTFNHW 528

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            +P+LN V Y G   AR+ IR++E        +       KFNVL+T+Y+ IL D+  LR 
Sbjct: 529  SPDLNYVVYLGPEAARSTIREHELL------IGGNPRKPKFNVLVTSYDYILLDADFLRT 582

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP--- 944
            + W+ L VDE HRLKN  S+L+  L SF+   ++L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 583  IKWQALAVDEAHRLKNKESQLYQKLVSFNVPCKMLITGTPIQNNLAELAALLDFLNPGKV 642

Query: 945  ------------ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPK 992
                        A      S +++     T  K+ +L K +AP +LRR K+    ++PPK
Sbjct: 643  LIDEDLEMLGKEAEVKEEDSAKDEEKRRETQAKLTQLHKAIAPFILRRTKETVESDLPPK 702

Query: 993  TERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT 1052
            TE+++ VELS +Q +YY+ +LT+NY  L +   G  +QS+LN++M+L+KV NHPY+  G 
Sbjct: 703  TEKIIRVELSDVQLDYYKNILTRNYAALSDASGG-HKQSLLNVMMELKKVSNHPYMFQGA 761

Query: 1053 EPD--SGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
            E    +GS      ++  I +S K+ LL  +L  L K+ HRVLIFSQM K+LDIL DYL 
Sbjct: 762  EERVLAGSTRREDSIKGLITSSGKMMLLDQLLAKLKKDNHRVLIFSQMVKMLDILGDYLR 821

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYD 1167
            +      Y+R+DG++  G R+ AI  FN + S  F FLLSTR+ GLGINL TADTVIIYD
Sbjct: 822  VR--GYQYQRLDGTIPAGPRRMAINHFNAEGSDDFCFLLSTRAGGLGINLMTADTVIIYD 879

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            SD+NP AD+QAM RAHRIGQ K + VYRLV + ++EE +++ A+ KL L+ L +
Sbjct: 880  SDWNPQADLQAMARAHRIGQKKPVNVYRLVAKQTIEEEVVKRARNKLFLEYLTI 933


>gi|449672665|ref|XP_004207764.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like, partial
            [Hydra magnipapillata]
          Length = 2394

 Score =  468 bits (1203), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 276/692 (39%), Positives = 398/692 (57%), Gaps = 62/692 (8%)

Query: 589  SVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENY 645
            +V +R+    V++    K   +  E+ VK+   S +H  W    QL    KR   K++ Y
Sbjct: 106  AVIERILAMRVSQQEVKKSTVMVEEYFVKYKAYSYLHCEWGTAEQLAKKDKRVHAKIKRY 165

Query: 646  KAKYGTTV--INICDERWKQPQ-----RVISLRSSKDG-TREAF----VKWTGLPYDECT 693
            + K  +T+  +N  D+    P+     RV+ +++++D  T E F    VKW  LPY+E T
Sbjct: 166  QQKRDSTLAFLNELDDEPFNPEYIEIDRVLDMQTTQDPVTNEKFNHYLVKWRALPYEEST 225

Query: 694  WE---KLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEE 750
            WE    +D+  ++++  L             K     EL          E    T  P  
Sbjct: 226  WELQMNIDDSIIKQFHEL-------------KKPPPPELRHFVNRPIDVEWKPYTVSPVY 272

Query: 751  LKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLV 810
              G  L  +QLE LNWL  CW+K  N ILADEMGLGKT+ + + + ++  ++  + P LV
Sbjct: 273  KNGNKLHDYQLEGLNWLTFCWYKRINCILADEMGLGKTIQSISLLCAIK-QYGIRGPFLV 331

Query: 811  LVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNV 870
            + PLST+ NW  EF  W  ++N + YHG A++R  I+QYE    D +N    TS YKF  
Sbjct: 332  IAPLSTIVNWQREFEEWT-DINAIVYHGSAQSRLHIQQYEMRYKD-ENGEDITSIYKFEA 389

Query: 871  LLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQN 930
            ++TTYEM+L  +S L  +P+  L++DE HRLKN   KL   LN+   +HRVLLTGTPLQN
Sbjct: 390  IITTYEMVLNANSFLCTIPFRCLIIDEAHRLKNQKCKLMEGLNNLQMEHRVLLTGTPLQN 449

Query: 931  NIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
            N+ E+++LLNF++P  FPS ++F  +F +L T  +V +L++++ P MLRRLK+D  QNI 
Sbjct: 450  NVEELFSLLNFVEPTRFPSQAAFLFEFGNLKTEGQVAKLQEILKPMMLRRLKEDVAQNIA 509

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQ-QSMLNIVMQLRKVCNHPYLI 1049
             K E +V VEL++IQ ++YRA+L KN+  L   G G +   +++N +M+LRK CNHP+LI
Sbjct: 510  SKEETIVEVELTTIQKKFYRAILEKNFSFLAK-GAGYSNLPNLMNTMMELRKCCNHPFLI 568

Query: 1050 PGTEP-----------DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTK 1098
             G E            D+          I++S K+ L+  +L  L   GH+VLIFSQM K
Sbjct: 569  NGAEEKIVSEYPSIPGDTNRALVQMNALIESSGKMVLIDKLLPKLKAGGHKVLIFSQMIK 628

Query: 1099 LLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINL 1157
            +L+++EDYL  +     +ER+DG +   +RQAAI RF   D  RFVFLL TR+ GLGINL
Sbjct: 629  VLNLIEDYLIAKRF--LFERIDGGIQGNNRQAAIDRFCKTDSDRFVFLLCTRAGGLGINL 686

Query: 1158 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD 1217
              ADTVII+DSD+NP  D+QA  R HRIGQ K + VYRL+ R + E  +   A  KL LD
Sbjct: 687  TAADTVIIFDSDWNPQNDLQAQARCHRIGQDKPVKVYRLICRNTYEREMFDRASLKLGLD 746

Query: 1218 QLFV------------NKSGSQKEVEDILRWG 1237
            +  +             ++ S+KEVED+L+ G
Sbjct: 747  KAVLQNMNVKEGSSSGQQAMSKKEVEDLLKKG 778


>gi|386768875|ref|NP_001245818.1| kismet, isoform D [Drosophila melanogaster]
 gi|383291254|gb|AFH03495.1| kismet, isoform D [Drosophila melanogaster]
          Length = 5343

 Score =  468 bits (1203), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/673 (39%), Positives = 384/673 (57%), Gaps = 74/673 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL-----KVLAK-RKLENYKAKYGTTVINICDERWKQP-- 664
            E+ VK+   S +H  W  E +L     +V AK R+ +  +++      NI DE + Q   
Sbjct: 1881 EYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFENIEDEPFNQDFT 1940

Query: 665  --QRVISL-----RSSKDGTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQ 714
               RV+ +      +S + T+   VKW  LPY++CTWE    +D   +E+Y     +  +
Sbjct: 1941 EVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPQR 2000

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHK 773
             E ++ K+                 E+    E+    KGG +L P+QLE LNWL+  W+ 
Sbjct: 2001 SEWKSKKRP--------------HPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYN 2046

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
            + N ILADEMGLGKT+ +  F+ S+Y E+  + P LV+ PLST+PNW  EF  W  ++NV
Sbjct: 2047 THNCILADEMGLGKTIQSLTFVHSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWT-DMNV 2104

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSS-------YKFNVLLTTYEMILADSSHLR 886
            V YHG   ++ +I+ YE++         KT S        KFNVL+TT+EMI+ D   L+
Sbjct: 2105 VVYHGSVTSKQMIQDYEYYY--------KTESGKVLKEPIKFNVLITTFEMIVTDYMDLK 2156

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
               W + V+DE HRLKN   KL   L   + +HRVLL+GTPLQNNI E+++LLNFL+P+ 
Sbjct: 2157 AFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQ 2216

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQA 1006
            F S   F  +F  L T ++V +L+ L+ P MLRRLK D  +++ PK E ++ VEL++IQ 
Sbjct: 2217 FSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQK 2276

Query: 1007 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---------SG 1057
            +YYR +L +N+  L+         +++N +M+LRK C HPYL+ G E             
Sbjct: 2277 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGE 2336

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
              E  ++  I ++ K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +E
Sbjct: 2337 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYP--FE 2394

Query: 1118 RVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG +    RQ AI R+++  S RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+
Sbjct: 2395 RIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDL 2454

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKS 1224
            QA  R HRIGQ K + +YRL+ R + E  +   A  KL LD+  +            NK 
Sbjct: 2455 QAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQ 2514

Query: 1225 GSQKEVEDILRWG 1237
             S+KE+ED+L+ G
Sbjct: 2515 LSKKEIEDLLKKG 2527


>gi|386768877|ref|NP_001245819.1| kismet, isoform E [Drosophila melanogaster]
 gi|383291255|gb|AFH03496.1| kismet, isoform E [Drosophila melanogaster]
          Length = 5252

 Score =  468 bits (1203), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/673 (39%), Positives = 384/673 (57%), Gaps = 74/673 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL-----KVLAK-RKLENYKAKYGTTVINICDERWKQP-- 664
            E+ VK+   S +H  W  E +L     +V AK R+ +  +++      NI DE + Q   
Sbjct: 1881 EYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFENIEDEPFNQDFT 1940

Query: 665  --QRVISL-----RSSKDGTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQ 714
               RV+ +      +S + T+   VKW  LPY++CTWE    +D   +E+Y     +  +
Sbjct: 1941 EVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPQR 2000

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHK 773
             E ++ K+                 E+    E+    KGG +L P+QLE LNWL+  W+ 
Sbjct: 2001 SEWKSKKRP--------------HPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYN 2046

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
            + N ILADEMGLGKT+ +  F+ S+Y E+  + P LV+ PLST+PNW  EF  W  ++NV
Sbjct: 2047 THNCILADEMGLGKTIQSLTFVHSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWT-DMNV 2104

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSS-------YKFNVLLTTYEMILADSSHLR 886
            V YHG   ++ +I+ YE++         KT S        KFNVL+TT+EMI+ D   L+
Sbjct: 2105 VVYHGSVTSKQMIQDYEYYY--------KTESGKVLKEPIKFNVLITTFEMIVTDYMDLK 2156

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
               W + V+DE HRLKN   KL   L   + +HRVLL+GTPLQNNI E+++LLNFL+P+ 
Sbjct: 2157 AFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQ 2216

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQA 1006
            F S   F  +F  L T ++V +L+ L+ P MLRRLK D  +++ PK E ++ VEL++IQ 
Sbjct: 2217 FSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQK 2276

Query: 1007 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---------SG 1057
            +YYR +L +N+  L+         +++N +M+LRK C HPYL+ G E             
Sbjct: 2277 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGE 2336

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
              E  ++  I ++ K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +E
Sbjct: 2337 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYP--FE 2394

Query: 1118 RVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG +    RQ AI R+++  S RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+
Sbjct: 2395 RIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDL 2454

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKS 1224
            QA  R HRIGQ K + +YRL+ R + E  +   A  KL LD+  +            NK 
Sbjct: 2455 QAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQ 2514

Query: 1225 GSQKEVEDILRWG 1237
             S+KE+ED+L+ G
Sbjct: 2515 LSKKEIEDLLKKG 2527


>gi|345486061|ref|XP_001602898.2| PREDICTED: hypothetical protein LOC100119051 [Nasonia vitripennis]
          Length = 4819

 Score =  468 bits (1203), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/667 (40%), Positives = 386/667 (57%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDERWKQP----- 664
            E+LVK+   S +H  W  E +L    KR   KL+ +K K   +  NI +     P     
Sbjct: 1836 EYLVKYRNFSYLHCEWRTEEELYKGDKRIQAKLKRFKQKMQQST-NIFENTEDDPFNPDF 1894

Query: 665  ---QRVISLRSSKDGT-----REAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFV 713
                RV+      D T     R   VKW  L Y++ TWE    +D   +E++     L  
Sbjct: 1895 VEVDRVLDEAIHTDPTTGETVRHFLVKWRSLQYEDSTWELEEDVDPEKIEQFHKFNKLPP 1954

Query: 714  QFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHK 773
            + + +  KK      +P        S+ V L E P    G +L P+QLE LNWL   W+ 
Sbjct: 1955 KDQWKPKKK-----PMP--------SQWVKLDESPVYKAGNSLRPYQLEGLNWLLFSWYN 2001

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
            + N ILADEMGLGKT+ +  F++ +Y ++  + P L++ PLST+PNW  EF  W  ++NV
Sbjct: 2002 NHNCILADEMGLGKTIQSLTFVNEVY-KYGIRGPFLIIAPLSTIPNWQREFEGWT-DMNV 2059

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
            + YHG A +R +I  YE +  + D   +     KFNVL+TT+E+I+ D + L+G  W + 
Sbjct: 2060 IVYHGSAASRNMISDYEVYYKN-DKGQQIKDLIKFNVLITTFEIIITDFNELKGYNWRLC 2118

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
            V+DE HRLKN   KL   L   + +HRVLL+GTPLQNN+ E+++LLNFL+P  F S  +F
Sbjct: 2119 VIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPNQFSSSEAF 2178

Query: 954  EEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAML 1013
             ++F +L++  +V +L+ L+ P MLRRLK+D  +++ PK E +V VEL++IQ +YYR +L
Sbjct: 2179 LKEFGNLSSEDEVHKLQVLLKPMMLRRLKEDVEKSLAPKQETVVEVELTNIQKKYYRGIL 2238

Query: 1014 TKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMR------- 1066
             +N+  L          +++N +M+LRK C HP+L+ G E D   +++ HE         
Sbjct: 2239 ERNFSFLAKGTTSANIPNLMNTMMELRKCCIHPFLLNGAE-DQIQLDYKHEKEDSESYYQ 2297

Query: 1067 --IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I +S K+ L+  +L  L   GHRVL+FSQM K LD+LEDYL  +  P  YER+DG + 
Sbjct: 2298 ALINSSGKMVLIDKLLPKLKASGHRVLVFSQMVKCLDLLEDYLVYKKYP--YERIDGRIR 2355

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI R+++ D  RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  R H
Sbjct: 2356 GNLRQAAIDRYSKPDSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCH 2415

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------------NKSGSQKEV 1230
            RIGQ K + VYRL+ R + E  +   A  KL LD+  +             NK+ ++KE+
Sbjct: 2416 RIGQQKMVKVYRLLCRNTYEREMFDKASLKLGLDKAILQSMNTSQGGKDPSNKALTKKEI 2475

Query: 1231 EDILRWG 1237
            ED+L+ G
Sbjct: 2476 EDLLKKG 2482


>gi|225436589|ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
            vinifera]
          Length = 1764

 Score =  468 bits (1203), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 281/695 (40%), Positives = 409/695 (58%), Gaps = 91/695 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK-RKLENYKAK----------YGTTVINICD--- 658
            EFL+KW G+S++H  W   S L+ L+  +K+ NY  K          +    I + D   
Sbjct: 456  EFLIKWKGQSHLHCQWKSFSDLQNLSGFKKVLNYTKKVMEEVKYRNMFSREEIEVNDVSK 515

Query: 659  -------ERWKQPQRVISLRSSKDGTR----EAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                   ++  Q +R+I+ R  K+G+     E  VKW GL Y E TWEK           
Sbjct: 516  EMDLDLIKQNSQVERIIAYRIGKEGSGDVMPEYLVKWQGLSYAEATWEK----------- 564

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKG---DCQQSEIVA----LTEQPEELKGGALFPHQ 760
              D+ + F +  + +  + +     +G   D Q+ +  A    L EQP  LKGG L  +Q
Sbjct: 565  --DVDIAFAQDAIDEYKAREAAAAIQGKMVDMQRKKSKASLRKLDEQPGWLKGGQLRDYQ 622

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            LE LN+L   W    NVILADEMGLGKTV + + +  L    +   P LV+VPLST+ NW
Sbjct: 623  LEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIYGPFLVVVPLSTLSNW 682

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTS-SYKFNVLLTTYEMIL 879
              EF  W P+LNV+ Y G   +R + +QYE++       NKKT  +  FN LLTTYE++L
Sbjct: 683  AKEFKKWLPDLNVIVYVGTRASREVCQQYEFYT------NKKTGRTILFNALLTTYEVVL 736

Query: 880  ADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLL 939
             D + L  + W  L+VDE HRLKNS ++L++ L+ FS ++++L+TGTPLQN++ E++ LL
Sbjct: 737  KDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSAKNKLLITGTPLQNSVEELWALL 796

Query: 940  NFLQPASFPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            +FL P  F +   F + + +L++  ++E   L   + PH+LRR+ KD  +++PPK ER++
Sbjct: 797  HFLDPDKFKNKDDFVQNYKNLSSFNEMELANLHMELRPHILRRVIKDVEKSLPPKIERIL 856

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHPYLIPGTEP- 1054
             VE+S +Q +YY+ +L +N+    ++ KGV   Q S+LNIV++L+K CNHP+L    +  
Sbjct: 857  RVEMSPLQKQYYKWILERNFH---DLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHG 913

Query: 1055 --------DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDY 1106
                    D G +E L    I +S KL LL  +L+ L++  HRVLIFSQM ++LDIL +Y
Sbjct: 914  YGGNRSTNDCGKLERL----ILSSGKLVLLDKLLEKLHETNHRVLIFSQMVRMLDILAEY 969

Query: 1107 LNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVII 1165
            +++      ++R+DGS     RQ A+  FN   S  F FLLSTR+ GLGINLATADTVII
Sbjct: 970  MSLR--GFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVII 1027

Query: 1166 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---- 1221
            +DSD+NP  D+QAM+RAHRIGQ + + +YR V   SVEE IL+ AK+K++LD L +    
Sbjct: 1028 FDSDWNPQNDLQAMSRAHRIGQREVVNIYRFVTSKSVEENILKRAKQKMVLDHLVIQKLN 1087

Query: 1222 ---------NKSGS---QKEVEDILRWGTEELFND 1244
                     +K GS   + E+  ILR+G EELF +
Sbjct: 1088 AEGRLEKKESKKGSYFDKNELSAILRFGAEELFKE 1122


>gi|393217337|gb|EJD02826.1| transcription regulator [Fomitiporia mediterranea MF3/22]
          Length = 1457

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 273/683 (39%), Positives = 400/683 (58%), Gaps = 73/683 (10%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK----RKLENYKAKYGTTVINICD----------- 658
            + +KW G S++HN+   +   + L +    ++++NY   Y      + D           
Sbjct: 245  YHIKWKGFSHLHNT---DENYEFLKRFRGLKRVDNYIKAYKQYQARLDDPTLSREDTEAL 301

Query: 659  -----------ERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE-PALEKYS 706
                       E +K  +RV+++R +  G  E F KW GL Y+ CTWE  +E   + K  
Sbjct: 302  MLDKERERQDLETFKTVERVVAMRDAP-GDVEYFCKWQGLSYEFCTWESAEEIKGIAK-- 358

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPE--ELKGGALFPHQLEAL 764
               D F++ E+   K        P+ K    + E V + + P+  E+ GG L   QL  L
Sbjct: 359  EQIDSFMKREKDG-KFPYRSQHYPKDK----RPEFVKIKKDPDYVEVTGGELKDFQLTGL 413

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NWL   W K +N ILADEMGLGKTV   AF+S L+ +     P LV+VPLST+  W  +F
Sbjct: 414  NWLAYLWSKGENGILADEMGLGKTVQTVAFLSYLFHQHNQYGPFLVIVPLSTITAWQMQF 473

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
            A WAP+LNV+ Y G +++R +IR YE +A        K+   K NVLLTTYE+IL D++ 
Sbjct: 474  AAWAPDLNVICYIGSSRSREVIRNYEVYAEP-----SKSKKVKMNVLLTTYELILRDAAM 528

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L  + W+ L VDE HRLKNS S+L+  L +F    ++L+TGTPLQNN+ E+ +L++FL P
Sbjct: 529  LGDIKWQALAVDEAHRLKNSESQLYEALRTFHAASKLLITGTPLQNNVKELLSLMHFLMP 588

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F   + F+    D     K++EL K +   MLRRLK+D ++++P K+ER++ VE+S++
Sbjct: 589  EKFALTNEFD--LADADHEAKIKELHKQLESLMLRRLKRDVVKSLPTKSERILRVEMSAL 646

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHE 1064
            Q  +Y+ +LTKNYQ L     G    S+LNI M+L+K  NHPYL  G E  S + E   +
Sbjct: 647  QTHFYKNILTKNYQGLVKSANGNGNISLLNIAMELKKAANHPYLFDGAENRSDNREETLK 706

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              + +S K+ LL  +L  L ++GHRVLIFSQM ++LDIL DY+++     T++R+DG+VS
Sbjct: 707  GLVMSSGKMVLLDKLLAKLKQDGHRVLIFSQMVRMLDILSDYMSLR--GYTHQRLDGTVS 764

Query: 1125 VGDRQAAITRFNQD-KSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               R+ +I  FN D  S F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM RAH
Sbjct: 765  SEVRKKSIAHFNADGSSDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAH 824

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN-----------KSGSQK---- 1228
            RIGQ   + VYR V + ++EE +L+ AK+K++L+   +N           KSG+Q     
Sbjct: 825  RIGQKSHVNVYRFVSKDTMEEDVLERAKRKMVLEYAIINQMDTSQAHLSSKSGTQSKDTT 884

Query: 1229 --------EVEDILRWGTEELFN 1243
                    E+  +L++G +++F+
Sbjct: 885  KPDNLSKDELTAVLKYGAQKMFD 907


>gi|189515794|ref|XP_697956.3| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Danio rerio]
          Length = 3094

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 282/672 (41%), Positives = 385/672 (57%), Gaps = 66/672 (9%)

Query: 613  EFLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYG--TTVINICDERWK----QP 664
            EF VK+ G S +H  W  I E +     ++K++ ++AK    T V  + DE +     + 
Sbjct: 869  EFYVKFKGFSYLHCRWADIEELEKDKRIQQKIKRFRAKQALSTFVTEMDDEPFNPDYVEV 928

Query: 665  QRVISLRSSKDGTRE----AFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFER 717
             RV+ +  S D   E      VKW  LPY++ TWE    +D+  +E++  +     Q +R
Sbjct: 929  DRVLDVSESTDENGELVTLYLVKWCSLPYEDSTWELKADIDQVKIEEFERVMAREPQLKR 988

Query: 718  QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNV 777
                  +          D Q+SE        E     AL  +QLE +NWL   W+ ++N 
Sbjct: 989  VERPPTS----------DWQKSESSR-----EYKNANALREYQLEGVNWLLFNWYNTRNC 1033

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 1034 ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1091

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  D      K  +YKF+ ++TT+EMIL D   LR VPW  +++DE
Sbjct: 1092 GSQASRKTIQAYEMYYRDTQGRIIK-GAYKFHAVITTFEMILTDCPELRNVPWRCVIIDE 1150

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L     +H+VLLTGTPLQN + E+++LLNFL+P  FPS S+F ++F
Sbjct: 1151 AHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPDRFPSESTFMQEF 1210

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL+++Q +YYRA+L KN+
Sbjct: 1211 GDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNVQKKYYRAILEKNF 1270

Query: 1018 QILRNIGKGVAQQ--------SMLNIVMQLRKVCNHPYLIPGTEP----------DSGSV 1059
              L   G G            ++LN +M+LRK CNHPYLI G E                
Sbjct: 1271 AFLSKSGAGGGSGGGGGSNVPNLLNTMMELRKCCNHPYLINGAEEKIMEEFRETHPLDQP 1330

Query: 1060 EFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
            EF  +  I+A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+
Sbjct: 1331 EFHLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERI 1388

Query: 1120 DGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DG V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA
Sbjct: 1389 DGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQA 1448

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------S 1226
              R HRIGQSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S
Sbjct: 1449 QARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAANGVQQLS 1508

Query: 1227 QKEVEDILRWGT 1238
            +KE+ED+LR G 
Sbjct: 1509 KKEIEDLLRKGA 1520


>gi|386768879|ref|NP_001245820.1| kismet, isoform F [Drosophila melanogaster]
 gi|383291256|gb|AFH03497.1| kismet, isoform F [Drosophila melanogaster]
          Length = 5191

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/673 (39%), Positives = 384/673 (57%), Gaps = 74/673 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL-----KVLAK-RKLENYKAKYGTTVINICDERWKQP-- 664
            E+ VK+   S +H  W  E +L     +V AK R+ +  +++      NI DE + Q   
Sbjct: 1881 EYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFENIEDEPFNQDFT 1940

Query: 665  --QRVISL-----RSSKDGTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQ 714
               RV+ +      +S + T+   VKW  LPY++CTWE    +D   +E+Y     +  +
Sbjct: 1941 EVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPQR 2000

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHK 773
             E ++ K+                 E+    E+    KGG +L P+QLE LNWL+  W+ 
Sbjct: 2001 SEWKSKKRP--------------HPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYN 2046

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
            + N ILADEMGLGKT+ +  F+ S+Y E+  + P LV+ PLST+PNW  EF  W  ++NV
Sbjct: 2047 THNCILADEMGLGKTIQSLTFVHSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWT-DMNV 2104

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSS-------YKFNVLLTTYEMILADSSHLR 886
            V YHG   ++ +I+ YE++         KT S        KFNVL+TT+EMI+ D   L+
Sbjct: 2105 VVYHGSVTSKQMIQDYEYYY--------KTESGKVLKEPIKFNVLITTFEMIVTDYMDLK 2156

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
               W + V+DE HRLKN   KL   L   + +HRVLL+GTPLQNNI E+++LLNFL+P+ 
Sbjct: 2157 AFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQ 2216

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQA 1006
            F S   F  +F  L T ++V +L+ L+ P MLRRLK D  +++ PK E ++ VEL++IQ 
Sbjct: 2217 FSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQK 2276

Query: 1007 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---------SG 1057
            +YYR +L +N+  L+         +++N +M+LRK C HPYL+ G E             
Sbjct: 2277 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGE 2336

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
              E  ++  I ++ K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +E
Sbjct: 2337 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYP--FE 2394

Query: 1118 RVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG +    RQ AI R+++  S RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+
Sbjct: 2395 RIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDL 2454

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKS 1224
            QA  R HRIGQ K + +YRL+ R + E  +   A  KL LD+  +            NK 
Sbjct: 2455 QAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQ 2514

Query: 1225 GSQKEVEDILRWG 1237
             S+KE+ED+L+ G
Sbjct: 2515 LSKKEIEDLLKKG 2527


>gi|194853302|ref|XP_001968138.1| GG24671 [Drosophila erecta]
 gi|190660005|gb|EDV57197.1| GG24671 [Drosophila erecta]
          Length = 5335

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/673 (39%), Positives = 384/673 (57%), Gaps = 74/673 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL-----KVLAK-RKLENYKAKYGTTVINICDERWKQP-- 664
            E+ VK+   S +H  W  E +L     +V AK R+ +  +++      NI DE + Q   
Sbjct: 1889 EYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFENIEDEPFNQDFT 1948

Query: 665  --QRVISL-----RSSKDGTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQ 714
               RV+ +      +S + T+   VKW  LPY++CTWE    +D   +E+Y     +  +
Sbjct: 1949 EVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPQR 2008

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHK 773
             E ++ K+                 E+    E+    KGG +L P+QLE LNWL+  W+ 
Sbjct: 2009 SEWKSKKR--------------PHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYN 2054

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
            + N ILADEMGLGKT+ +  F+ S+Y E+  + P LV+ PLST+PNW  EF  W  ++NV
Sbjct: 2055 THNCILADEMGLGKTIQSLTFVHSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWT-DMNV 2112

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSS-------YKFNVLLTTYEMILADSSHLR 886
            V YHG   ++ +I+ YE++         KT S        KFNVL+TT+EMI+ D   L+
Sbjct: 2113 VVYHGSVTSKQMIQDYEYYY--------KTESGKVLKEPIKFNVLITTFEMIVTDYMDLK 2164

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
               W + V+DE HRLKN   KL   L   + +HRVLL+GTPLQNNI E+++LLNFL+P+ 
Sbjct: 2165 AFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQ 2224

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQA 1006
            F S   F  +F  L T ++V +L+ L+ P MLRRLK D  +++ PK E ++ VEL++IQ 
Sbjct: 2225 FSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQK 2284

Query: 1007 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---------SG 1057
            +YYR +L +N+  L+         +++N +M+LRK C HPYL+ G E             
Sbjct: 2285 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGE 2344

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
              E  ++  I ++ K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +E
Sbjct: 2345 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYP--FE 2402

Query: 1118 RVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG +    RQ AI R+++  S RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+
Sbjct: 2403 RIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDL 2462

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKS 1224
            QA  R HRIGQ K + +YRL+ R + E  +   A  KL LD+  +            NK 
Sbjct: 2463 QAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQ 2522

Query: 1225 GSQKEVEDILRWG 1237
             S+KE+ED+L+ G
Sbjct: 2523 LSKKEIEDLLKKG 2535


>gi|195470194|ref|XP_002087393.1| GE16349 [Drosophila yakuba]
 gi|194173494|gb|EDW87105.1| GE16349 [Drosophila yakuba]
          Length = 5330

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/673 (39%), Positives = 384/673 (57%), Gaps = 74/673 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL-----KVLAK-RKLENYKAKYGTTVINICDERWKQP-- 664
            E+ VK+   S +H  W  E +L     +V AK R+ +  +++      NI DE + Q   
Sbjct: 1882 EYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFENIEDEPFNQDFT 1941

Query: 665  --QRVISL-----RSSKDGTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQ 714
               RV+ +      +S + T+   VKW  LPY++CTWE    +D   +E+Y     +  +
Sbjct: 1942 EVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPQR 2001

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHK 773
             E ++ K+                 E+    E+    KGG +L P+QLE LNWL+  W+ 
Sbjct: 2002 SEWKSKKRP--------------HPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYN 2047

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
            + N ILADEMGLGKT+ +  F+ S+Y E+  + P LV+ PLST+PNW  EF  W  ++NV
Sbjct: 2048 THNCILADEMGLGKTIQSLTFVHSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWT-DMNV 2105

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSS-------YKFNVLLTTYEMILADSSHLR 886
            V YHG   ++ +I+ YE++         KT S        KFNVL+TT+EMI+ D   L+
Sbjct: 2106 VVYHGSVTSKQMIQDYEYYY--------KTESGKVLKEPIKFNVLITTFEMIVTDYMDLK 2157

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
               W + V+DE HRLKN   KL   L   + +HRVLL+GTPLQNNI E+++LLNFL+P+ 
Sbjct: 2158 AFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQ 2217

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQA 1006
            F S   F  +F  L T ++V +L+ L+ P MLRRLK D  +++ PK E ++ VEL++IQ 
Sbjct: 2218 FSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQK 2277

Query: 1007 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---------SG 1057
            +YYR +L +N+  L+         +++N +M+LRK C HPYL+ G E             
Sbjct: 2278 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGE 2337

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
              E  ++  I ++ K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +E
Sbjct: 2338 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYP--FE 2395

Query: 1118 RVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG +    RQ AI R+++  S RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+
Sbjct: 2396 RIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDL 2455

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKS 1224
            QA  R HRIGQ K + +YRL+ R + E  +   A  KL LD+  +            NK 
Sbjct: 2456 QAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQ 2515

Query: 1225 GSQKEVEDILRWG 1237
             S+KE+ED+L+ G
Sbjct: 2516 LSKKEIEDLLKKG 2528


>gi|393244885|gb|EJD52396.1| transcription regulator [Auricularia delicata TFB-10046 SS5]
          Length = 1435

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 264/643 (41%), Positives = 379/643 (58%), Gaps = 54/643 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK-----RKLENY-------KAKYGTTVINICD--- 658
            F +KW   S++HN+     +L    K     +++ENY       +A Y +   ++ D   
Sbjct: 209  FHIKWKNYSHLHNT----DELYDFLKHCRGFKRVENYINKYKQWEAAYTSPHASLEDKEA 264

Query: 659  ------------ERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYS 706
                        E  K  +RV++    + G  + F KW GL Y++CTWE  +E +     
Sbjct: 265  MALERERMIEDHETHKLVERVVT-EKVEGGVTKYFCKWQGLNYEQCTWEDAEEISTIARD 323

Query: 707  HLTDLFVQFERQTLKKDASE----DELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLE 762
             + + +   E++ L    SE    D  P+        + V +T       G  L   QL 
Sbjct: 324  QI-EAYQDREKRGLFPARSEIYNRDRRPQFTQIPSDPDFVVVT-------GNQLKDFQLT 375

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   WH  +N ILADEMGLGKTV +  ++S L+   +   P LV+VPLST+P W +
Sbjct: 376  GLNWLAYLWHNGENGILADEMGLGKTVQSVVYLSYLFHRMRQLGPFLVIVPLSTIPAWQS 435

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
             F  WAP+L+V+ Y G ++AR+IIR YE+  +       K    KFNVLLTTYE++L D+
Sbjct: 436  TFQNWAPDLDVITYQGNSRARSIIRHYEFGQTG----GHKKPQLKFNVLLTTYELVLKDA 491

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            S L G+ W  L VDE HRLKN  S+L+  L +FS   ++L+TGTPLQNN+ E+  L++FL
Sbjct: 492  SELSGIKWLALAVDEAHRLKNHESQLYEALRAFSASSKLLITGTPLQNNVKELLALMHFL 551

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  FP  + F+   ND     K++EL   +   MLRRLK+D ++++P K E+++ VE+S
Sbjct: 552  MPERFPLTNDFD--LNDADHESKIKELHSQLEGLMLRRLKRDVIKSLPTKKEQILRVEMS 609

Query: 1003 SIQAEYYRAMLTKNYQIL-RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF 1061
            ++Q  YY+ +LTKN+  L +    G    S+LNI M+L+K  NHPYL  G E  + S E 
Sbjct: 610  TLQTHYYKNILTKNFTALSKGAAGGGGHISLLNIAMELKKAANHPYLFDGAEAPAASPEE 669

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
              +  + +S KL LL  +L  L  +GHRVLIFSQM ++LDIL DY+++   P  ++R+DG
Sbjct: 670  TLKALVMSSGKLVLLDKLLARLRADGHRVLIFSQMVRMLDILTDYMHLRGYP--HQRLDG 727

Query: 1122 SVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            +VS  +R+ AI  FN   S  FVFLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM 
Sbjct: 728  TVSSDERKKAIAHFNAPGSLDFVFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMA 787

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK 1223
            RAHRIGQ   + VYR V + ++EE +L+ AKKK++L+   +N+
Sbjct: 788  RAHRIGQKSHVNVYRFVSKDTMEEDVLERAKKKMVLEYAIINQ 830


>gi|380476817|emb|CCF44500.1| SNF2 super family protein [Colletotrichum higginsianum]
          Length = 1599

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/680 (39%), Positives = 399/680 (58%), Gaps = 65/680 (9%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYK---------AKYGTTVINICDER- 660
            +E+ +KW GKS++H++W     L+ +   R++ENY           ++G  +     E+ 
Sbjct: 294  FEYYIKWQGKSHLHDTWETAETLRSMRGYRRVENYFRTIVEHELLIRFGEDIPPETKEQF 353

Query: 661  -------------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                         + +  RV+++R   D T E  VKW G  YDECTWE +       +  
Sbjct: 354  FLDRERSEEALEDYTKVDRVVAIRDGDDET-EYLVKWKGCYYDECTWE-VASAIKSDFQD 411

Query: 708  LTDLFVQFERQTL---KKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEAL 764
              D F+    ++    +K+++ D   R         +  L  QP+ +KGG L   QL  L
Sbjct: 412  KIDQFLDRSSRSWVSNRKESNPDTRTR---------MTKLEAQPDYIKGGELRSFQLRGL 462

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            N+L   W ++ NVILADEMGLGKTV + +F+S L  E + + P L++ PLS +P W   F
Sbjct: 463  NFLCLNWTRANNVILADEMGLGKTVQSVSFLSWLRNEREQEGPFLIVAPLSVIPAWGDTF 522

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              W+P++N V Y G   +R+ IR  E        +N      KFN L+T+YEMIL D   
Sbjct: 523  DHWSPDMNYVVYLGNETSRSTIRDNELM------VNGNPKKPKFNALITSYEMILQDWQF 576

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L+ + W+ L+VDE HRLKN  S+L++ L  F    ++L+TGTP+QNN+ E+  L++FL P
Sbjct: 577  LQQIKWQALLVDEAHRLKNKESQLYARLVGFGVPCKILITGTPIQNNLAELSALMDFLNP 636

Query: 945  ASFPSLSSFEEKFNDLT---TTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
                     +E+  +L    T +K+++L K +AP++LRR K+    ++PPKTE+++ VEL
Sbjct: 637  GKV----VIDEELENLAGNDTQEKLQDLHKSIAPYILRRTKETVESDLPPKTEKIIRVEL 692

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSV 1059
            S +Q EYY+ +LT+NY  L N      + S+LNI+M+L+KV NHPY+  G E    +GS 
Sbjct: 693  SDVQLEYYKNILTRNYAALSNATG--QKNSLLNIMMELKKVSNHPYMFAGAEDRVLAGST 750

Query: 1060 EFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
                +++  I +S K+ LL  +L  L K+GHRVL+FSQM K+LDIL DY+ +  G K ++
Sbjct: 751  RREDQIKGLIASSGKMMLLDQLLTKLKKDGHRVLVFSQMVKMLDILSDYMALR-GYK-FQ 808

Query: 1118 RVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG+++ G R+ AI  FN +D   F FLLSTR+ GLGINL TADTV+I+DSD+NP AD+
Sbjct: 809  RLDGTIAAGPRRMAINHFNAEDSDDFCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADL 868

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRW 1236
            QAM RAHRIGQ K + +YRLV + +VEE +L+ A+ KL+L+ L +     Q  V D  + 
Sbjct: 869  QAMGRAHRIGQKKPVSIYRLVSKETVEEEVLERARNKLLLEYLTI-----QAGVTDDGKA 923

Query: 1237 GTEELFNDSPGINGKDMGEN 1256
              EE+      I+G +  E+
Sbjct: 924  FREEMNKKGLKIDGPNSAED 943


>gi|189233881|ref|XP_970343.2| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein
            [Tribolium castaneum]
 gi|270014822|gb|EFA11270.1| hypothetical protein TcasGA2_TC010805 [Tribolium castaneum]
          Length = 1697

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 278/709 (39%), Positives = 407/709 (57%), Gaps = 77/709 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW   ++IHN+W  E  LK   V   +KLENY  K                 Y   
Sbjct: 264  QYLIKWKDWAHIHNTWESEESLKEQKVKGMKKLENYIKKEIEIQQWMRYATPEDIEYYEC 323

Query: 653  VINICDE---RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLT 709
             + +  E    +   +R+I+  +  DG  + F+KW  LPY + TWE  D   ++K     
Sbjct: 324  QMELSQELLKSYNNVERIIAKYNKPDGGTDYFIKWESLPYADSTWE--DSGLIQK----- 376

Query: 710  DLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG----ALFPHQL 761
                ++ ++  + D  E         C+    + +   +  QPE + G      L  +Q+
Sbjct: 377  ----KWPKKIKEFDDREQSKQTPTKHCKVLKYRPKFHEVKTQPEYMMGIEKTLVLRDYQM 432

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
            + LNWL   W K  +VILADEMGLGKT+    F+  L+  ++   P L +VPLSTM +W 
Sbjct: 433  DGLNWLIHSWSKENSVILADEMGLGKTIQTICFLYYLFNTYQLHGPFLCVVPLSTMTSWQ 492

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
             EFA WAP +N V Y G  ++R  IRQYEW       L       KFN +LTTYE++L D
Sbjct: 493  REFAQWAPEMNFVTYLGDVQSRDTIRQYEWSYEGSKRL-------KFNAILTTYEIVLKD 545

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
             + L  + W VL+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+F
Sbjct: 546  KAFLGSLNWAVLLVDEAHRLKNDDSLLYKALMEFDTNHRLLITGTPLQNSLKELWALLHF 605

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            + P  F +   FE K ++  +T+    L K + P +LRR+KKD  +++P K E+++ VE+
Sbjct: 606  IMPQKFQAWEEFE-KDHEHASTKGYSRLHKQLEPFILRRVKKDVEKSLPAKVEQILRVEM 664

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF 1061
            +++Q +YY+ +LTKNY  LR   KG +  + LNIV++L+K CNH  L   TE +S + + 
Sbjct: 665  TTLQKQYYKWILTKNYNALRKGVKG-STNTFLNIVIELKKCCNHALLTKPTEYESNNSQE 723

Query: 1062 LH-EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             H ++ ++ S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL +   P  ++R+D
Sbjct: 724  DHLQLLLRGSGKLVLLDKLLIRLRETGHRVLIFSQMVRMLDILGEYLQLRHFP--FQRLD 781

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G +    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA 
Sbjct: 782  GGIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQ 841

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSGS-- 1226
             RAHRIGQ  ++ +YRLV   SVEE I++ AK+K++LD L +           +K GS  
Sbjct: 842  ARAHRIGQKNQVNIYRLVTARSVEEEIVERAKQKMVLDHLVIQRMDTTGRTVLDKKGSSN 901

Query: 1227 -----QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQK 1270
                 ++++  IL++G EELF D    + KD  E N  I+E +R  E +
Sbjct: 902  NNPFNKEDLTAILKFGAEELFKDE---DDKDE-EPNCDIDEILRRAETR 946


>gi|17986031|ref|NP_523441.1| kismet, isoform A [Drosophila melanogaster]
 gi|7230509|gb|AAF43004.1|AF215703_1 KISMET-L long isoform [Drosophila melanogaster]
 gi|22945599|gb|AAF51527.3| kismet, isoform A [Drosophila melanogaster]
          Length = 5322

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/673 (39%), Positives = 384/673 (57%), Gaps = 74/673 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL-----KVLAK-RKLENYKAKYGTTVINICDERWKQP-- 664
            E+ VK+   S +H  W  E +L     +V AK R+ +  +++      NI DE + Q   
Sbjct: 1881 EYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFENIEDEPFNQDFT 1940

Query: 665  --QRVISL-----RSSKDGTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQ 714
               RV+ +      +S + T+   VKW  LPY++CTWE    +D   +E+Y     +  +
Sbjct: 1941 EVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPQR 2000

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHK 773
             E ++ K+                 E+    E+    KGG +L P+QLE LNWL+  W+ 
Sbjct: 2001 SEWKSKKRP--------------HPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYN 2046

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
            + N ILADEMGLGKT+ +  F+ S+Y E+  + P LV+ PLST+PNW  EF  W  ++NV
Sbjct: 2047 THNCILADEMGLGKTIQSLTFVHSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWT-DMNV 2104

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSS-------YKFNVLLTTYEMILADSSHLR 886
            V YHG   ++ +I+ YE++         KT S        KFNVL+TT+EMI+ D   L+
Sbjct: 2105 VVYHGSVTSKQMIQDYEYYY--------KTESGKVLKEPIKFNVLITTFEMIVTDYMDLK 2156

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
               W + V+DE HRLKN   KL   L   + +HRVLL+GTPLQNNI E+++LLNFL+P+ 
Sbjct: 2157 AFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQ 2216

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQA 1006
            F S   F  +F  L T ++V +L+ L+ P MLRRLK D  +++ PK E ++ VEL++IQ 
Sbjct: 2217 FSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQK 2276

Query: 1007 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---------SG 1057
            +YYR +L +N+  L+         +++N +M+LRK C HPYL+ G E             
Sbjct: 2277 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGE 2336

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
              E  ++  I ++ K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +E
Sbjct: 2337 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYP--FE 2394

Query: 1118 RVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG +    RQ AI R+++  S RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+
Sbjct: 2395 RIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDL 2454

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKS 1224
            QA  R HRIGQ K + +YRL+ R + E  +   A  KL LD+  +            NK 
Sbjct: 2455 QAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQ 2514

Query: 1225 GSQKEVEDILRWG 1237
             S+KE+ED+L+ G
Sbjct: 2515 LSKKEIEDLLKKG 2527


>gi|195436658|ref|XP_002066274.1| GK18181 [Drosophila willistoni]
 gi|194162359|gb|EDW77260.1| GK18181 [Drosophila willistoni]
          Length = 5689

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 264/666 (39%), Positives = 386/666 (57%), Gaps = 60/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL-----KVLAK-RKLENYKAKYGTTVINICDERWK---- 662
            E+ VK+   S +H  W  E +L     +V AK R+ +  +++      NI +E +     
Sbjct: 2056 EYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKVRRFQQKQSQQLNIFENIEEEPFNPDFV 2115

Query: 663  QPQRVISL-----RSSKDGTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQ 714
            +  RV+ +      +S + T+   VKW  LPY++CTWE    +D   +E+Y     + ++
Sbjct: 2116 EVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPMR 2175

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKS 774
             E ++ K+   E             +   L + P    G +L P+QLE LNWL+  W+ S
Sbjct: 2176 CEWKSRKRPHPE-------------QWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYNS 2222

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
             N ILADEMGLGKT+ +  F+ S+Y E+  + P LV+ PLST+PNW  EF  W  ++NVV
Sbjct: 2223 HNCILADEMGLGKTIQSLTFVHSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWT-DMNVV 2280

Query: 835  EYHGCAKARAIIRQYE-WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
             YHG   ++ +I+ YE ++ +D   + K+    KFNVL+TT+EMI+ D   L+   W + 
Sbjct: 2281 VYHGSVTSKQMIQDYEFYYKTDSGKVLKE--PIKFNVLITTFEMIVTDYMDLKTFNWRLC 2338

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
            V+DE HRLKN   KL   L   + +HRVLL+GTPLQNNI E+++LLNFL+P+ F S   F
Sbjct: 2339 VIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFGSQEEF 2398

Query: 954  EEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAML 1013
              +F  L T ++V +L+ L+ P MLRRLK D  +++ PK E ++ VEL++IQ +YYR +L
Sbjct: 2399 MSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGIL 2458

Query: 1014 TKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---------SGSVEFLHE 1064
             +N+  L+         +++N +M+LRK C HPYL+ G E               E  ++
Sbjct: 2459 EQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPESYYK 2518

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I ++ K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +ER+DG + 
Sbjct: 2519 NLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYP--FERIDGRIR 2576

Query: 1125 VGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQ AI R+++  S RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  R H
Sbjct: 2577 GNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCH 2636

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKSGSQKEVE 1231
            RIGQ K + +YRL+ R + E  +   A  KL LD+  +            NK  ++KE+E
Sbjct: 2637 RIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQLTKKEIE 2696

Query: 1232 DILRWG 1237
            D+L+ G
Sbjct: 2697 DLLKKG 2702


>gi|198476743|ref|XP_001357465.2| GA17619 [Drosophila pseudoobscura pseudoobscura]
 gi|198137832|gb|EAL34535.2| GA17619 [Drosophila pseudoobscura pseudoobscura]
          Length = 5605

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 265/666 (39%), Positives = 384/666 (57%), Gaps = 60/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL-----KVLAK-RKLENYKAKYGTTVINICDERWKQP-- 664
            E+ VK+   S +H  W  E +L     +V AK R+ +  +++      NI +E + Q   
Sbjct: 1990 EYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQVNIFENIEEEPFNQDFT 2049

Query: 665  --QRVISL-----RSSKDGTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQ 714
               RV+ +      +S + T+   VKW  LPY++CTWE    +D   +E+Y       ++
Sbjct: 2050 EVDRVLDMSVHTDENSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKTPLR 2109

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKS 774
             E ++ K+   E             +   L + P    G +L P+QLE LNWL+  W  +
Sbjct: 2110 CEWKSRKRPPPE-------------QWKKLEKTPIYKGGNSLRPYQLEGLNWLKFSWFNT 2156

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
             N ILADEMGLGKT+ +  F+ S+Y EF  + P LV+ PLST+PNW  EF  W  ++N+V
Sbjct: 2157 HNCILADEMGLGKTIQSLTFVHSVY-EFGIRGPFLVIAPLSTIPNWQREFEGWT-DMNIV 2214

Query: 835  EYHGCAKARAIIRQYE-WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
             YHG   ++ +I+ YE ++ +D   + K+    KFNVL+TT+EMI+ D   L+   W + 
Sbjct: 2215 VYHGSVTSKQMIQDYEFYYKTDSGKVLKEP--IKFNVLITTFEMIVTDYMDLKQFNWRLC 2272

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
            V+DE HRLKN   KL   L   + +HRVLL+GTPLQNNI E+++LLNFL+PA F S   F
Sbjct: 2273 VIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPAQFSSQEEF 2332

Query: 954  EEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAML 1013
              +F +L   ++V +L+ L+ P MLRRLK D  +++ PK E ++ VEL++IQ +YYR +L
Sbjct: 2333 MTEFGNLRNEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGIL 2392

Query: 1014 TKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---------SGSVEFLHE 1064
             +N+  L+         +++N +M+LRK C HPYL+ G E               E  ++
Sbjct: 2393 EQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPESYYK 2452

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I ++ K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +ER+DG + 
Sbjct: 2453 NLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYP--FERIDGRIR 2510

Query: 1125 VGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQ AI R+++  S RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  R H
Sbjct: 2511 GNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCH 2570

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKSGSQKEVE 1231
            RIGQ K + +YRL+ R + E  +   A  KL LD+  +            NK  S+KE+E
Sbjct: 2571 RIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQLSKKEIE 2630

Query: 1232 DILRWG 1237
            D+L+ G
Sbjct: 2631 DLLKKG 2636


>gi|150866039|ref|XP_001385507.2| transcriptional regulator [Scheffersomyces stipitis CBS 6054]
 gi|149387295|gb|ABN67478.2| transcriptional regulator [Scheffersomyces stipitis CBS 6054]
          Length = 1414

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 282/725 (38%), Positives = 407/725 (56%), Gaps = 83/725 (11%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKY----------------GTT 652
            + Y F +KW  +S++HN+W   + LK     RK+ENY  ++                   
Sbjct: 182  LDYLFRIKWTDQSHLHNTWEQWNDLKEYKGIRKVENYIKQFIIYDQEIRNDPLTTREDIE 241

Query: 653  VINICDER-------WKQPQRVIS---LRSSKDGTR-EAFVKWTGLPYDECTWEKLDEPA 701
             ++I  ER       + + +R++    + +    T+ + + KW  L YDEC+WE  +E A
Sbjct: 242  AMDIDRERKRDEQEEYTRVERIVDSERIETENGETKLQYYCKWRRLYYDECSWEDAEEIA 301

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQL 761
                  +     + + + L   ++   L       Q+     L +QP  +K G L   QL
Sbjct: 302  KIAPDQVAKYQQRLKSKILPNLSANYPL------SQRPRFEKLVKQPVFIKNGELRDFQL 355

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
              LNW+   W +++N ILADEMGLGKTV   +F+S L    +   P +V+VPLST+P W 
Sbjct: 356  TGLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIYSRRQNGPHIVVVPLSTIPAWQ 415

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
              F  W+P++N V Y G  +AR  IR YE++ S+    NK     KFN+LLTTYE IL D
Sbjct: 416  ETFEKWSPDVNCVYYLGNTQARKTIRDYEFYGSN----NKP----KFNILLTTYEYILKD 467

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
             + L    W+ L VDE HRLKN+ S L+  L SF   +R+L+TGTPLQNNI E+  L+NF
Sbjct: 468  RNELGAFKWQFLAVDEAHRLKNADSSLYESLKSFKVANRLLITGTPLQNNIKELAALVNF 527

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L P  F      + +  D      +++L+K + P +LRRLKKD  +++P KTER++ VEL
Sbjct: 528  LMPGKFDIEQEIDFETPDEEQELYIKDLQKKIQPFILRRLKKDVEKSLPSKTERILRVEL 587

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE----PDSG 1057
            S IQ EYY+ ++TKNY  L N G   AQ S+LN++ +L+K  NHPYL  G E       G
Sbjct: 588  SDIQTEYYKNIITKNYSAL-NAGNKGAQISLLNVMSELKKASNHPYLFDGAENRVLAKVG 646

Query: 1058 SVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKT 1115
            S    + +R  I +S K+ LL  +L  L KEGHRVLIFSQM ++LDIL DYL+I+     
Sbjct: 647  SATRDNILRGMIMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRILDILGDYLSIK--GYQ 704

Query: 1116 YERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHA 1174
            ++R+DG +    R+ +I  FN  +S+ F+FLLSTR+ GLGINL TADTVII+DSD+NP A
Sbjct: 705  FQRLDGGIPSAQRRISIDHFNAPESKDFIFLLSTRAGGLGINLMTADTVIIFDSDWNPQA 764

Query: 1175 DIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD----QLFVNKSGSQK-- 1228
            D+QAM RAHRIGQ   + VYR V + +VEE+IL+ A+KK++L+     L +    S+K  
Sbjct: 765  DLQAMARAHRIGQKNHVSVYRFVSKDTVEEQILERARKKMILEYAIISLGITDPNSKKSK 824

Query: 1229 ------EVEDILRWGTEELFNDSPG-------------------INGKDMGENNTSIEEA 1263
                  E+  IL++G   +F ++                     +   D+GE+N   EE 
Sbjct: 825  TEPSTGELSQILKFGAGNMFKENDNQKKLEDLNLDDVLNHAEDHVTTPDLGESNLGSEEF 884

Query: 1264 VRDLE 1268
            ++  E
Sbjct: 885  LKQFE 889


>gi|190405721|gb|EDV08988.1| chromo domain protein 1 [Saccharomyces cerevisiae RM11-1a]
          Length = 1436

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 281/671 (41%), Positives = 395/671 (58%), Gaps = 52/671 (7%)

Query: 606  KGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTT----VINICDERW 661
            +GK +    L+  +    I N  I   +L +++   +E YK+ + +     V  + + R 
Sbjct: 193  EGKVLEKTVLLTSITARIIMNFLIQMDRLNLISTILVETYKSIWSSPWMEEVGRLMNLRS 252

Query: 662  KQPQRVI-SLRSS-KDGTRE--AFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFER 717
              P+R+I S R+S  DGT +    VKW  L YDE TWE           + TD+ V+   
Sbjct: 253  PLPERIIDSQRASLVDGTSQLQYLVKWRRLNYDEATWE-----------NATDI-VKLAP 300

Query: 718  QTLKKDASEDE---LPRGKGD--CQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWH 772
            + +K   + +    LP+   +   Q+     L+ QP  +KGG L   QL  +NW+   W 
Sbjct: 301  EQVKHFQNRENSKILPQYSSNYTSQRPRFEKLSVQPPFIKGGELRDFQLTGINWMAFLWS 360

Query: 773  KSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLN 832
            K  N ILADEMGLGKTV   AFIS L    +   P +++VPLSTMP WL  F  WAP+LN
Sbjct: 361  KGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLN 420

Query: 833  VVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEV 892
             + Y G  K+R  IR+YE++ ++P    KKT   KFNVLLTTYE IL D + L  + W+ 
Sbjct: 421  CICYMGNQKSRDTIREYEFY-TNPRAKGKKT--MKFNVLLTTYEYILKDRAELGSIKWQF 477

Query: 893  LVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSS 952
            + VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  L+NFL P  F     
Sbjct: 478  MAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQE 537

Query: 953  FEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAM 1012
             + +  D    + + +L + + P +LRRLKKD  +++P KTER++ VELS +Q EYY+ +
Sbjct: 538  IDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNI 597

Query: 1013 LTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP------DSGSVEFLHEMR 1066
            LTKNY  L    KG    S+LNI+ +L+K  NHPYL    E         G +   + +R
Sbjct: 598  LTKNYSALTAGAKG-GHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLR 656

Query: 1067 --IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I+     ++R+DG+V 
Sbjct: 657  GLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIK--GINFQRLDGTVP 714

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               R+ +I  FN  D + FVFLLSTR+ GLGINL TADTV+I+DSD+NP AD+QAM RAH
Sbjct: 715  SAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAH 774

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQK-----EVE 1231
            RIGQ   ++VYRLV + +VEE +L+ A+KK++L+   +       NK   +      E+ 
Sbjct: 775  RIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKYTKKNEPNAGELS 834

Query: 1232 DILRWGTEELF 1242
             IL++G   +F
Sbjct: 835  AILKFGAGNMF 845


>gi|346974989|gb|EGY18441.1| chromodomain helicase hrp3 [Verticillium dahliae VdLs.17]
          Length = 1604

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 262/642 (40%), Positives = 386/642 (60%), Gaps = 54/642 (8%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENY---------KAKYGTTV-------- 653
            +E+ +KW GKS++H++W     L+ V   RKLENY           ++G  +        
Sbjct: 283  FEYYIKWQGKSHLHDTWETAQTLRDVRGYRKLENYFRVVVDHELYIRFGFDIPPETKEQF 342

Query: 654  ------INICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                  +    E + +  RV+++R   + T E  VKW G  YDECTWE     + + +  
Sbjct: 343  FLDRERVEEALEDYTKVDRVVAVRDGDEET-EYLVKWKGCYYDECTWEVASAISTD-FQD 400

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    +    D +E           ++ +  L  QP+ +KGG L   QL  LN+L
Sbjct: 401  KIDQFLDRSSRQWVSDRTE------TNPDTRTRMTKLEAQPDYIKGGELRTFQLRGLNFL 454

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W ++ NVILADEMGLGKTV + +F+S L  + + + P L++ PLS +P W   F  W
Sbjct: 455  CLNWTRANNVILADEMGLGKTVQSVSFMSWLRNDREQEGPFLIVAPLSVIPAWGDTFDNW 514

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            +P++N V Y G   +R  IR+ E        +N  +   KFN L+T+YEMIL D S L+ 
Sbjct: 515  SPDMNYVVYLGNEASRQTIRENELM------INGNSKKPKFNALITSYEMILHDWSFLQT 568

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ L+VDE HRLKN  S+L++ L SF    ++L+TGTP+QNN+ E+  L++FL P   
Sbjct: 569  IKWQALLVDEAHRLKNKESQLYAKLVSFGVPCKILITGTPIQNNLAELSALMDFLNPGKV 628

Query: 948  PSLSSFEEKFNDLT---TTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
                  +E+   LT   T +K+++L   +AP++LRR K+    ++PPKTE+++ VELS +
Sbjct: 629  ----IIDEELETLTGADTQEKLQDLHTSIAPYILRRTKETVESDLPPKTEKIIRVELSDV 684

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFL 1062
            Q EYY+ +LT+NY  L +      + S+LNI+M+L+KV NHPY+  G E    +GS    
Sbjct: 685  QLEYYKNILTRNYAALSDATG--QKNSLLNIMMELKKVSNHPYMFGGAEDRVLAGSTRRE 742

Query: 1063 HEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL DYL +  G K ++R+D
Sbjct: 743  DQVKGLIASSGKMMLLDQLLTKLKKDGHRVLIFSQMVKMLDILGDYLALR-GYK-FQRLD 800

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++ G R+ AI  FN + S  F FLLSTR+ GLGINL TADTV+I+DSD+NP AD+QAM
Sbjct: 801  GTIAAGPRRMAINHFNAEGSDDFCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAM 860

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
             RAHRIGQ K + +YRLV + +VEE +L+ A+ KL+L+ L +
Sbjct: 861  GRAHRIGQKKPVSIYRLVSKETVEEEVLERARNKLLLEYLTI 902


>gi|336384082|gb|EGO25230.1| hypothetical protein SERLADRAFT_361029 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 1260

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 263/635 (41%), Positives = 373/635 (58%), Gaps = 59/635 (9%)

Query: 659  ERWKQPQRVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFE 716
            E +K  +R++S R S D  G  E F KWTGL Y+ CTWE  DE              + +
Sbjct: 113  ETYKIVERIVSHRDSGDVEGQLEYFCKWTGLNYEHCTWETQDE---------IRPIAKIQ 163

Query: 717  RQTLKKDASEDELPRGK---GDCQQSEIVALTEQPEELK--GGALFPHQLEALNWLRKCW 771
             +  +   +E + P         Q+     +T+ P+ +   GG L   QL  LNWL   W
Sbjct: 164  IEAYRSREAEAKFPYKSMQYARTQRPTFQKITKDPDYITATGGELKDFQLTGLNWLAYLW 223

Query: 772  HKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNL 831
             K +N ILADEMGLGKTV   AFIS L+ E     P LV+VPLST+  W  +FA WAP++
Sbjct: 224  SKGENGILADEMGLGKTVQTVAFISYLFHEMHQYGPFLVIVPLSTITAWQTQFAAWAPDI 283

Query: 832  NVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWE 891
            NV+ Y G A AR +IR YE+  S     NK+    K NVLLTTYE+ L D+  L  + W 
Sbjct: 284  NVITYIGTAAAREVIRTYEFGPS-----NKR---LKMNVLLTTYELTLRDAKDLADIKWH 335

Query: 892  VLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLS 951
             L VDE HRLKNS S+L+  L SFS   ++L+TGTPLQNN+ E+ +L++FL P  F   +
Sbjct: 336  ALAVDEAHRLKNSESQLYEALRSFSAASKLLITGTPLQNNVKELLSLMHFLMPEKFALSN 395

Query: 952  SFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRA 1011
             F+   ND     K++EL + +   MLRRLK+D + ++P K+ER++ VE+S++Q  +Y+ 
Sbjct: 396  EFD--LNDADHEAKIKELHEQLESLMLRRLKRDVLTSLPTKSERILRVEMSALQTHFYKN 453

Query: 1012 MLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASA 1071
            +LTKN+Q L     G    S+LNI M+L+K  NHPYL  G E  + + E   +  +  S 
Sbjct: 454  ILTKNFQGLIKSANGNNNISLLNIAMELKKAANHPYLFDGAEVRTDNSEETLKGLVMNSG 513

Query: 1072 KLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAA 1131
            K+ LL  ++  L ++GHRVLIFSQM ++LDIL DY+++      ++R+DG V+   R+ +
Sbjct: 514  KMVLLDKLMVRLRQDGHRVLIFSQMVRMLDILSDYMSLR--GYQHQRLDGMVASEARKKS 571

Query: 1132 ITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKR 1190
            I  FN   S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM RAHRIGQ   
Sbjct: 572  IAHFNAPGSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSH 631

Query: 1191 LLVYRLVVRASVEERILQLAKKKLMLDQLFVNK--------SG---------------SQ 1227
            + VYR V + ++EE +L+ AKKK++L+   +N+        SG               S+
Sbjct: 632  VSVYRFVSKDTMEEDVLERAKKKMVLEYAIINQMDTSQAHLSGKGIEKVKEASKPDNLSK 691

Query: 1228 KEVEDILRWGTEELFNDSPGINGKDMGENNTSIEE 1262
             E+  +L++G +++F+       KD  + N  ++E
Sbjct: 692  DELTAVLKYGAQKMFD-------KDDSQQNQKLDE 719


>gi|157127434|ref|XP_001654978.1| chromodomain helicase DNA binding protein [Aedes aegypti]
 gi|108882413|gb|EAT46638.1| AAEL002230-PA, partial [Aedes aegypti]
          Length = 4467

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 269/665 (40%), Positives = 377/665 (56%), Gaps = 59/665 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENY--KAKYGTTVINICDERWKQPQRV 667
            E+ VK+   S +H  W  E +L    KR   K++ +  K +    +    DE    P  V
Sbjct: 1783 EYFVKYRNFSYLHCEWRTEDELFKGDKRVGNKIKRFLQKQQQQLNIFESLDEEPFNPDFV 1842

Query: 668  -------ISLRSSKDG--TREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
                   +S  +  DG   +   VKW  LPY++ TWE    +D P +++Y     +  + 
Sbjct: 1843 EVDRVLDVSEHTDDDGKTVKHYLVKWKSLPYEDSTWELEDDVDLPKIDQYYRFNKIPPKS 1902

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSK 775
            E +T K+   +             +  AL E P    G  L P+QLE LNWLR  W+K  
Sbjct: 1903 EWKTKKRPHPD-------------QWKALPESPTYKAGNRLRPYQLEGLNWLRYSWYKGN 1949

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ +  F+ S+Y E+  + P LV+ PLST+PNW  EF  W  ++NV+ 
Sbjct: 1950 NCILADEMGLGKTIQSLTFVHSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWT-DMNVIV 2007

Query: 836  YHGCAKARAIIRQYE-WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
            YHG A +R +I+ YE ++  +     K  +  KFNVL+TT+EMI+ D   L+   + V V
Sbjct: 2008 YHGSATSRQMIQDYEVFYRYENGKYIKDIN--KFNVLITTFEMIVTDYQDLKPFNFRVCV 2065

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            +DE HRLKN   KL   L   + +HRVLL+GTPLQNN+ E+++LLNFL+P+ F S   F 
Sbjct: 2066 IDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPSQFSSNDEFL 2125

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
             +F  L T  +V +L+ L+ P MLRRLK D  +++ PK E +V VEL++IQ +YYR +L 
Sbjct: 2126 REFGSLKTESEVLKLQALLKPMMLRRLKDDVEKSLAPKEETIVEVELTNIQKKYYRGILE 2185

Query: 1015 KNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---------SGSVEFLHEM 1065
            +N+  L          +++N +M+LRK C HPYL+ G E               E  ++ 
Sbjct: 2186 QNFSFLMKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEDQIQYDYRQQHGDDAEAYYKN 2245

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             I +S K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +ER+DG +  
Sbjct: 2246 LIVSSGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLIYRKYP--FERIDGRIRG 2303

Query: 1126 GDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQAAI R+++ D  RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  R HR
Sbjct: 2304 NLRQAAIDRYSKPDSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHR 2363

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKSGSQKEVED 1232
            IGQ K + +YRL+ R + E  +   A  KL LD+  +            NK  S+KE+ED
Sbjct: 2364 IGQQKMVKIYRLLCRNTYEREMFDKASLKLGLDKAILQSMNTAQGGKDNNKQLSKKEIED 2423

Query: 1233 ILRWG 1237
            +L+ G
Sbjct: 2424 LLKKG 2428


>gi|432916520|ref|XP_004079330.1| PREDICTED: uncharacterized protein LOC101165345 [Oryzias latipes]
          Length = 3266

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 282/672 (41%), Positives = 384/672 (57%), Gaps = 67/672 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK-----RKLENYKAK--YGTTVINICDERWK---- 662
            F VK+ G S +H  W   ++L+ L +     +K++ +KAK      +  + DE +     
Sbjct: 923  FYVKFKGFSYLHCRW---AELEELERDKRIHQKIKRFKAKQQLNNFITEMDDEPFNPDYV 979

Query: 663  QPQRVISLRSSKDGTREA----FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
            +  RV+ +  S D   E      VKW  LPY++CTWE   +  L K         ++ER 
Sbjct: 980  EVDRVLDISESTDENGEMVTLYLVKWCSLPYEDCTWELKADIELSKIE-------EYER- 1031

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
               +  + + + R       ++   L    E   G AL  +QLE LNWL   W+ S+N I
Sbjct: 1032 VASRTPNTNRVDRPPA----ADWKKLESSREYGNGNALREYQLEGLNWLTFNWYNSRNCI 1087

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  +Y     + P LV+ PLST+PNW  EF  W   LNVV YHG
Sbjct: 1088 LADEMGLGKTIQSITFLYEMYL-MGIEGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHG 1145

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R II+ YE +  D      K   Y+F+ ++TT+EMILAD   LR +PW  +V+DE 
Sbjct: 1146 SQASRKIIQAYEMYFRDGQGKIIK-GVYRFHAVITTFEMILADCPELRNIPWRCVVIDEA 1204

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L     +H+VLLTGTPLQN + E+++LLNFL+P  FPS  +F  +F 
Sbjct: 1205 HRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSEQTFMTEFG 1264

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 1265 DLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFS 1324

Query: 1019 ILRNIGKGVAQQ-------SMLNIVMQLRKVCNHPYLIPGTE--------PDSGSVEFLH 1063
             L   G G           ++LN +M+LRK CNHPYLI G E           G    + 
Sbjct: 1325 FLSKGGAGGGGGSGAASVPNLLNTMMELRKCCNHPYLINGAEEKIIEEFRESHGGRTDVP 1384

Query: 1064 EM----RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
            EM     I+A+ KL L+  +L  L   GHRVL+FSQM + LDILEDYL     P  YER+
Sbjct: 1385 EMALQAMIQAAGKLVLIDKLLPKLKAGGHRVLVFSQMVRCLDILEDYLIQRRYP--YERI 1442

Query: 1120 DGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DG V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA
Sbjct: 1443 DGRVRGNMRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQA 1502

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN--------KSG----S 1226
              R HRIGQSK + +YRL+ R S E  +   A  KL LD+  +          SG    S
Sbjct: 1503 QARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENANSGVQQLS 1562

Query: 1227 QKEVEDILRWGT 1238
            +KE+ED+L+ G 
Sbjct: 1563 KKEIEDLLKKGA 1574


>gi|115491355|ref|XP_001210305.1| hypothetical protein ATEG_00219 [Aspergillus terreus NIH2624]
 gi|114197165|gb|EAU38865.1| hypothetical protein ATEG_00219 [Aspergillus terreus NIH2624]
          Length = 1459

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 265/652 (40%), Positives = 379/652 (58%), Gaps = 50/652 (7%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENY--KAKYGTTVINICD-------ERW 661
            +E+ +KW GKS+ H +W   E+     + R+L+NY  K  Y    + + D       E+W
Sbjct: 278  FEYYIKWQGKSHYHATWETSETLANCRSTRRLDNYVRKVLYEEIRLRLEDDVAPEDKEKW 337

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                          K  +RVI++R   +GT E  VKW  L YD CTWE  D  + E    
Sbjct: 338  NLDRERDVEAIEDYKHVERVIAMREGDEGT-EYLVKWKRLFYDSCTWETEDLVS-EIAQR 395

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D ++    +    D +E           +     +   P  ++ G L   Q++ +N++
Sbjct: 396  EIDRYLDRSSRPPISDKTE------SNPATRKPFEPIKGTPTFVQNGELKEFQVKGVNFM 449

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K++NV+LADEMGLGKTV   AFIS L    + + P +V+VPLSTMP+W   F  W
Sbjct: 450  AFNWVKNRNVVLADEMGLGKTVQTVAFISWLRHVRRQQGPFVVVVPLSTMPSWADTFDNW 509

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P+LN + Y+G   AR ++R++E        ++      KFNVLLTTYE +L DSS L  
Sbjct: 510  TPDLNYIVYNGNEAARNVLREHELM------IDGNPKRPKFNVLLTTYEYVLLDSSFLSQ 563

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
              W+ + VDE HRLKN  S+L+  L  F    R+L+TGTP+QNN+ E+  LL+FL P   
Sbjct: 564  FKWQFMAVDEAHRLKNRESQLYQKLLEFRSPARLLITGTPIQNNLAELSALLDFLNPGLV 623

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
                  +   N    +QK+ EL K + P MLRR K     ++PPKTE+++ VELS IQ E
Sbjct: 624  DI--DVDMDLNAEAASQKLAELTKAIQPFMLRRTKSKVESDLPPKTEKIIRVELSDIQLE 681

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSV---EFL 1062
            YY+ +LTKNY  L    KG  +QS+LNI+M+L+K  NHP++ P  E     GS    + L
Sbjct: 682  YYKNILTKNYAALNEGTKG-QKQSLLNIMMELKKASNHPFMFPNAEARILEGSTRREDIL 740

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              M I +S K+ LL  +L  L ++GHRVLIFSQM K+LD+L +Y+  EF    Y+R+DG+
Sbjct: 741  RAM-ITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGEYM--EFRGYQYQRLDGT 797

Query: 1123 VSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            ++   R+ AI  FN    S F F+LSTR+ GLGINL TADTV+++DSD+NP AD+QAM R
Sbjct: 798  IAAASRRLAIEHFNAPGSSDFAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMAR 857

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            AHRIGQ+K + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  +I
Sbjct: 858  AHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEASEI 909


>gi|296083825|emb|CBI24213.3| unnamed protein product [Vitis vinifera]
          Length = 1539

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 281/695 (40%), Positives = 409/695 (58%), Gaps = 91/695 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK-RKLENYKAK----------YGTTVINICD--- 658
            EFL+KW G+S++H  W   S L+ L+  +K+ NY  K          +    I + D   
Sbjct: 259  EFLIKWKGQSHLHCQWKSFSDLQNLSGFKKVLNYTKKVMEEVKYRNMFSREEIEVNDVSK 318

Query: 659  -------ERWKQPQRVISLRSSKDGTR----EAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                   ++  Q +R+I+ R  K+G+     E  VKW GL Y E TWEK           
Sbjct: 319  EMDLDLIKQNSQVERIIAYRIGKEGSGDVMPEYLVKWQGLSYAEATWEK----------- 367

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKG---DCQQSEIVA----LTEQPEELKGGALFPHQ 760
              D+ + F +  + +  + +     +G   D Q+ +  A    L EQP  LKGG L  +Q
Sbjct: 368  --DVDIAFAQDAIDEYKAREAAAAIQGKMVDMQRKKSKASLRKLDEQPGWLKGGQLRDYQ 425

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            LE LN+L   W    NVILADEMGLGKTV + + +  L    +   P LV+VPLST+ NW
Sbjct: 426  LEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIYGPFLVVVPLSTLSNW 485

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTS-SYKFNVLLTTYEMIL 879
              EF  W P+LNV+ Y G   +R + +QYE++       NKKT  +  FN LLTTYE++L
Sbjct: 486  AKEFKKWLPDLNVIVYVGTRASREVCQQYEFYT------NKKTGRTILFNALLTTYEVVL 539

Query: 880  ADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLL 939
             D + L  + W  L+VDE HRLKNS ++L++ L+ FS ++++L+TGTPLQN++ E++ LL
Sbjct: 540  KDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSAKNKLLITGTPLQNSVEELWALL 599

Query: 940  NFLQPASFPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            +FL P  F +   F + + +L++  ++E   L   + PH+LRR+ KD  +++PPK ER++
Sbjct: 600  HFLDPDKFKNKDDFVQNYKNLSSFNEMELANLHMELRPHILRRVIKDVEKSLPPKIERIL 659

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHPYLIPGTEP- 1054
             VE+S +Q +YY+ +L +N+    ++ KGV   Q S+LNIV++L+K CNHP+L    +  
Sbjct: 660  RVEMSPLQKQYYKWILERNFH---DLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHG 716

Query: 1055 --------DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDY 1106
                    D G +E L    I +S KL LL  +L+ L++  HRVLIFSQM ++LDIL +Y
Sbjct: 717  YGGNRSTNDCGKLERL----ILSSGKLVLLDKLLEKLHETNHRVLIFSQMVRMLDILAEY 772

Query: 1107 LNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVII 1165
            +++      ++R+DGS     RQ A+  FN   S  F FLLSTR+ GLGINLATADTVII
Sbjct: 773  MSLR--GFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVII 830

Query: 1166 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---- 1221
            +DSD+NP  D+QAM+RAHRIGQ + + +YR V   SVEE IL+ AK+K++LD L +    
Sbjct: 831  FDSDWNPQNDLQAMSRAHRIGQREVVNIYRFVTSKSVEENILKRAKQKMVLDHLVIQKLN 890

Query: 1222 ---------NKSGS---QKEVEDILRWGTEELFND 1244
                     +K GS   + E+  ILR+G EELF +
Sbjct: 891  AEGRLEKKESKKGSYFDKNELSAILRFGAEELFKE 925


>gi|260945000|ref|XP_002616798.1| hypothetical protein CLUG_04039 [Clavispora lusitaniae ATCC 42720]
 gi|238850447|gb|EEQ39911.1| hypothetical protein CLUG_04039 [Clavispora lusitaniae ATCC 42720]
          Length = 1259

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 297/739 (40%), Positives = 413/739 (55%), Gaps = 91/739 (12%)

Query: 601  ESAQVKGKA-VSYEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKY--------- 649
            E+A+V G+  + Y F VKW  KS++HN+W     LK     RK++NY  +Y         
Sbjct: 29   ENAEVTGQPKLDYLFKVKWSDKSHLHNTWESYQTLKDYKGFRKVDNYIKQYILLDQEIRN 88

Query: 650  --GTT-----VINICDERWKQPQ-------RVI-SLRSSKD-GTRE--AFVKWTGLPYDE 691
               TT      ++I  ER +  Q       R+I S R  +D GT +    VKW  L YDE
Sbjct: 89   DPSTTKEDIEAMDIERERKRDEQDEFTHVERIIDSDRIEQDDGTSQLQYLVKWKRLYYDE 148

Query: 692  CTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGD---CQQSEIVALTEQP 748
             +WE       E  + L    V   +Q L+       LP    +    Q+     L +QP
Sbjct: 149  ASWENA-----ETIAELAPEQVAKYQQRLQSKI----LPNLSANYPMSQRPRFEKLNKQP 199

Query: 749  EELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPC 808
              +K G L   QL  LNW+   W +++N ILADEMGLGKTV   AF+S L    +   P 
Sbjct: 200  LFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPH 259

Query: 809  LVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKF 868
            LV+VPLST+P W   F  W+P++N + Y G  +AR  IR++E++     N+ KK    KF
Sbjct: 260  LVVVPLSTIPAWQETFEKWSPDVNCIYYLGNTEARKKIREFEFY-----NVTKKP---KF 311

Query: 869  NVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPL 928
            N+LLTTYE IL D + L    W+ L VDE HRLKN+ S L+  L SF   +R+L+TGTPL
Sbjct: 312  NILLTTYEYILKDRNELGAFKWQFLAVDEAHRLKNAESSLYESLKSFKVANRLLITGTPL 371

Query: 929  QNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQN 988
            QNNI E+  L +FL P  F      +    D    + ++ L+  + P++LRRLKKD  ++
Sbjct: 372  QNNIKELAALCDFLMPGRFSIDQEIDFDAPDDKQEEYIKHLQSSIKPYILRRLKKDVEKS 431

Query: 989  IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYL 1048
            +P KTER++ VELS +Q EYYR ++TKNY  L N G   +Q S+LN++ +L+K  NHPYL
Sbjct: 432  LPSKTERILRVELSDVQMEYYRNIITKNYAAL-NAGVKGSQISLLNVMSELKKASNHPYL 490

Query: 1049 IPGTEP------DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDI 1102
              G E        S S + + +  + +S K+ LL  +L  L KEGHRVLIFSQM ++LDI
Sbjct: 491  FDGAEERVLAKGGSTSRDNVLKGLVMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRILDI 550

Query: 1103 LEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATAD 1161
            L DYL+I+     ++R+DG V    R+ +I  FN   S+ FVFLLSTR+ GLGINL TAD
Sbjct: 551  LGDYLSIK--GYQFQRLDGGVPSAQRKISIDHFNSPDSKDFVFLLSTRAGGLGINLMTAD 608

Query: 1162 TVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            TVII+DSD+NP AD+QAM RAHRIGQ K + VYR V + +VEE IL+ A+KK++L+   +
Sbjct: 609  TVIIFDSDWNPQADLQAMARAHRIGQKKHVSVYRFVSKDTVEEEILERARKKMILEYAII 668

Query: 1222 -------NKSGSQK------EVEDILRWGTEELFNDSPG-------------------IN 1249
                   N S   K      E+  IL++G   +F+ +                     ++
Sbjct: 669  SLGMTDPNSSKKNKNEPNTSELSQILKFGAANMFSATDNQKKLEELNLDDVLNHAEDHVS 728

Query: 1250 GKDMGENNTSIEEAVRDLE 1268
              D+GE+N   EE ++  E
Sbjct: 729  TPDLGESNLGSEEFLKQFE 747


>gi|156401565|ref|XP_001639361.1| predicted protein [Nematostella vectensis]
 gi|156226489|gb|EDO47298.1| predicted protein [Nematostella vectensis]
          Length = 1360

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 294/751 (39%), Positives = 414/751 (55%), Gaps = 84/751 (11%)

Query: 542  LGERNDKMVVEDADVSLRDNEGLTVSEIHITCESTDKDVDVGKKTSGSVAKRVQEPAVTE 601
            L E+  K+  +D D +L D EG    E H   ++    V     T G +A     P   E
Sbjct: 5    LREKRKKIYKDDFDYNLSDEEG----ERHRHAQTL---VPPAHDTGGEMAP--LPPEEYE 55

Query: 602  SAQVKGKAVSY--------------EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLEN 644
               +  K +S               EF VK+   S +H  W    +L    KR   K++ 
Sbjct: 56   EVMIVEKILSSRLRDVEDGTITKVEEFHVKFKNYSYLHAEWATAEKLAKGDKRVQMKIKR 115

Query: 645  YKAKYGTTVINICDER-------WKQPQRVISLRSSKDGTR-----EAFVKWTGLPYDEC 692
            YKAK   T     +         + +  RV+ + +  D           VKW  LPY+E 
Sbjct: 116  YKAKQLNTAAFFSEMEEDSFNPDYVEVDRVLDMSTGMDHNTGEPITHFLVKWRSLPYEES 175

Query: 693  TWE---KLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPE 749
            TWE    ++E  ++++  L +     +RQ           PR        E   L   P 
Sbjct: 176  TWEVKADVEESKIQQFYKLREPPPLPQRQFR---------PRP----YPHEWHKLETSPV 222

Query: 750  ELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
                  L  +QLE +NWL  CW   +N ILADEMGLGKT+ + AF+  +   +  + P L
Sbjct: 223  YKDENTLREYQLEGVNWLMFCWCNRQNSILADEMGLGKTIQSIAFLFEMQ-RYGIRGPNL 281

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            V+ PLST+ NW  EF  W  ++N V YHG A +R +I++YE++  D ++     + +KF 
Sbjct: 282  VIAPLSTISNWQREFESWN-DINAVVYHGSASSRHLIQEYEFYYRD-EHGQPIPNIFKFQ 339

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
            VL+TTYE+I+AD+  L  VPW  +++DE HRLKN   KL   LN+   +HR+LLTGTPLQ
Sbjct: 340  VLITTYEIIIADNMQLSTVPWRAVIIDEAHRLKNRNCKLLEGLNNLQMEHRILLTGTPLQ 399

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            NN+ E+++LLNFL+P+ FPS  +F  +F DL T  +V++LK+L+ P MLRRLK+D  +NI
Sbjct: 400  NNVEELFSLLNFLEPSQFPSQGAFLMEFGDLKTESQVDKLKQLLKPMMLRRLKEDVEKNI 459

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQS----MLNIVMQLRKVCNH 1045
             PK E ++ VEL+++Q ++YRA+L +N+  L    KG +  +    ++N +M+LRK CNH
Sbjct: 460  APKEETIIEVELTTVQKKFYRAILERNFAFL---AKGTSSTANVPNLMNTMMELRKCCNH 516

Query: 1046 PYLIPGTE----PDSG--SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKL 1099
            P+LI G E     + G   V+      I+AS KL L+H +L  L   GH+VL+FSQM + 
Sbjct: 517  PFLITGAEEKILQEYGREHVDRHTHAMIEASGKLVLIHKLLPKLKLGGHKVLVFSQMVRC 576

Query: 1100 LDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLA 1158
            LDILEDYL     P  YER+DG V    RQAAI RF++ D  RFVFLL TR+ GLGINL 
Sbjct: 577  LDILEDYLVHMKYP--YERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLT 634

Query: 1159 TADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ 1218
             ADTVII+DSD+NP  D+QA  R HRIGQS+ + VYRL+ R S E  +   A  KL LD+
Sbjct: 635  AADTVIIFDSDWNPQNDLQAQARCHRIGQSRSVKVYRLITRNSYEREMFDRASMKLGLDK 694

Query: 1219 LFV-----------NKSGSQKEVEDILRWGT 1238
              +           N   S++E+ED+L+ G 
Sbjct: 695  AVLQSMNTKENAGNNGQMSKREIEDLLKRGA 725


>gi|254567734|ref|XP_002490977.1| Nucleosome remodeling factor that functions in regulation of
            transcription elongation [Komagataella pastoris GS115]
 gi|238030774|emb|CAY68697.1| Nucleosome remodeling factor that functions in regulation of
            transcription elongation [Komagataella pastoris GS115]
          Length = 1387

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 289/731 (39%), Positives = 405/731 (55%), Gaps = 94/731 (12%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKY-----------GTTVINI- 656
            V +EF +KW G S++HN+W   S L      +K++NY  ++            TT  +I 
Sbjct: 187  VDFEFKIKWTGISHLHNTWESYSDLNGFKGIKKVDNYIKQFIIYDQEVRNDTFTTREDIE 246

Query: 657  -----------CDERWKQPQRVI-SLRSSKDGTR--EAFVKWTGLPYDECTWEKLDEPAL 702
                           +   +R++ S R  +DG    +   KW  L YDECTWE  D   +
Sbjct: 247  ALDLDRERRREELAEYTHVERIVDSDRIIEDGDSKLQYLCKWKRLNYDECTWE--DANTI 304

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDC--QQSEIVALTEQPEELKGGALFPHQ 760
             K S   D    F+++     A+   LP         + +   L  QP  +K G L   Q
Sbjct: 305  VKLS--PDKVTHFQQR-----ANSKTLPSLSASYGNNRPKFEKLEVQPVYIKNGELRDFQ 357

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            L  LNW+   W +++N ILADEMGLGKTV   +F+S L    +   P LV+VPLST+P W
Sbjct: 358  LTGLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIFARRQYGPHLVVVPLSTVPAW 417

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
               F  WAP++N + Y G   +R +IR YE+       L  K+   KFNVLLTTYE IL 
Sbjct: 418  QETFEKWAPSVNTIYYMGNTNSRKMIRDYEFF------LPGKSKKPKFNVLLTTYEYILK 471

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D + L    W+ L VDE HRLKN+ S L+  L  F   +R+L+TGTPLQNNI E+  L+N
Sbjct: 472  DRAELGQFKWQFLAVDEAHRLKNAESSLYESLFDFKIANRLLITGTPLQNNIKELAALVN 531

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQK----VEELKKLVAPHMLRRLKKDAMQNIPPKTERM 996
            FL P  F    + E++ +  T +++    +++L+  + P +LRRLKKD  +++  KTER+
Sbjct: 532  FLMPGKF----TIEQEIDFETASEEQETYIKDLQSKIHPFILRRLKKDVEKSLHSKTERI 587

Query: 997  VPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD- 1055
            + VELS +Q  YY+ +LTKNY  L N G   AQ S+LN++ +L+K  NHPYL  G E   
Sbjct: 588  LRVELSDLQTHYYKNILTKNYAAL-NAGPKEAQISLLNVMAELKKTSNHPYLFDGAEEQV 646

Query: 1056 -----SGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIE 1110
                 S S E +    I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL   
Sbjct: 647  LANLGSSSRENIFRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRMLDILGDYLT-- 704

Query: 1111 FGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSD 1169
            F   +++R+DG+V    R+ AI  FN D S+ FVFLLSTR+ GLGINL TADTVII+DSD
Sbjct: 705  FKGYSFQRLDGTVPSARRRVAIDHFNADGSQDFVFLLSTRAGGLGINLMTADTVIIFDSD 764

Query: 1170 FNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD----QLFVNKSG 1225
            +NP AD+QAM RAHRIGQ   ++VYR V + +VEE +L+ A+KK++L+     L ++  G
Sbjct: 765  WNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGISDPG 824

Query: 1226 SQK---------EVEDILRWGTEELFNDSPG-------------------INGKDMGENN 1257
              K         E+ +IL++G   +F  S                     +   D+GE+N
Sbjct: 825  QTKKKSNEPSSGELSEILKFGAGNMFKASDNQKKLEDLNLDDVLNHAEDHVTTPDLGESN 884

Query: 1258 TSIEEAVRDLE 1268
               EE ++  E
Sbjct: 885  LGGEEFLKQFE 895


>gi|268567385|ref|XP_002639966.1| Hypothetical protein CBG10790 [Caenorhabditis briggsae]
          Length = 1463

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 272/688 (39%), Positives = 401/688 (58%), Gaps = 85/688 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVL-AK--RKLENYKAKYGTTVI--------------- 654
            +F VKW G S++HN+W  E+ L ++ AK  +K++NY  K     +               
Sbjct: 253  QFFVKWTGWSHLHNTWESENSLTIMHAKGIKKVQNYVKKQKEVEMWKRSADKEYIEFYEC 312

Query: 655  ------NICDERWKQPQRVISLRSSKD------GTREAFVKWTGLPYDECTWE--KLDEP 700
                   +C+E +K+ +RV++ ++S+D         E  +KW+GLPY +CTWE  K+  P
Sbjct: 313  EQQMAEELCEE-YKKVERVVAHQTSRDRAPDGSFATEFLIKWSGLPYADCTWEDEKMVAP 371

Query: 701  -ALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---L 756
              ++ Y H          + LK       + R +   ++     L  QP+ LK      L
Sbjct: 372  DQIQGYYHRV--------ENLKPPNKNATVLRKRPKFEK-----LESQPDYLKTNGDHKL 418

Query: 757  FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLST 816
              +QLE LNW+   W K  + ILADEMGLGKT+ + + ++SL+  +    P LV+VPLST
Sbjct: 419  RDYQLEGLNWMIYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLST 478

Query: 817  MPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYE 876
            M  W  EFA WAP++N++ Y G   +R +IRQYEW           T   K N +LTTYE
Sbjct: 479  MAAWQKEFAQWAPDINLIIYMGDVVSRDMIRQYEWFVGG-------TKKMKVNAILTTYE 531

Query: 877  MILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMY 936
            ++L D + L  V W  L+VDE HRLKN  S L+  L  F F H++L+TGTPLQN++ E++
Sbjct: 532  ILLKDKAFLSSVDWAALLVDEAHRLKNDESLLYKCLIQFRFNHKLLITGTPLQNSLKELW 591

Query: 937  NLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERM 996
             LL+F+ P  F     FE   N+ +  + +  L K + P +LRR+KKD  +++PPKTE++
Sbjct: 592  ALLHFIMPEKFDCWEEFETAHNE-SNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQI 650

Query: 997  VPVELSSIQAEYYRAMLTKNYQILRNIGKGV--AQQSMLNIVMQLRKVCNHPYLIPGTEP 1054
            + V++++ Q ++Y+ +LTKNY   R + KGV  +    +N+VM+L+K CNH  L    + 
Sbjct: 651  LRVDMTAHQKQFYKWILTKNY---RELSKGVKGSINGFVNLVMELKKCCNHASLTRQYDY 707

Query: 1055 DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPK 1114
                 +   +  +K+S KL LL  +L  L  +GHRVLIFSQM  +LDIL++YL +   P 
Sbjct: 708  IYDDAQGRLQQLLKSSGKLILLDKLLCRLRDKGHRVLIFSQMVMMLDILQEYLQLRRFPS 767

Query: 1115 TYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPH 1173
              +R+DGS+    R+ A+  +N   S  F FLLSTR+ GLGINLATADTVII+DSD+NP 
Sbjct: 768  --QRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQ 825

Query: 1174 ADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK---------- 1223
             D+QAM+RAHRIGQ+K + +YRLV + SVEE I++ AK+KL+LD L + +          
Sbjct: 826  NDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLS 885

Query: 1224 -----SGS----QKEVEDILRWGTEELF 1242
                 SGS    ++E+  IL++G  ELF
Sbjct: 886  KNATASGSVPFDKQELSAILKFGAVELF 913


>gi|328352490|emb|CCA38889.1| chromodomain-helicase-DNA-binding protein 1 [Komagataella pastoris
            CBS 7435]
          Length = 1387

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 289/731 (39%), Positives = 405/731 (55%), Gaps = 94/731 (12%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKY-----------GTTVINI- 656
            V +EF +KW G S++HN+W   S L      +K++NY  ++            TT  +I 
Sbjct: 187  VDFEFKIKWTGISHLHNTWESYSDLNGFKGIKKVDNYIKQFIIYDQEVRNDTFTTREDIE 246

Query: 657  -----------CDERWKQPQRVI-SLRSSKDGTR--EAFVKWTGLPYDECTWEKLDEPAL 702
                           +   +R++ S R  +DG    +   KW  L YDECTWE  D   +
Sbjct: 247  ALDLDRERRREELAEYTHVERIVDSDRIIEDGDSKLQYLCKWKRLNYDECTWE--DANTI 304

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDC--QQSEIVALTEQPEELKGGALFPHQ 760
             K S   D    F+++     A+   LP         + +   L  QP  +K G L   Q
Sbjct: 305  VKLS--PDKVTHFQQR-----ANSKTLPSLSASYGNNRPKFEKLEVQPVYIKNGELRDFQ 357

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            L  LNW+   W +++N ILADEMGLGKTV   +F+S L    +   P LV+VPLST+P W
Sbjct: 358  LTGLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIFARRQYGPHLVVVPLSTVPAW 417

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
               F  WAP++N + Y G   +R +IR YE+       L  K+   KFNVLLTTYE IL 
Sbjct: 418  QETFEKWAPSVNTIYYMGNTNSRKMIRDYEFF------LPGKSKKPKFNVLLTTYEYILK 471

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D + L    W+ L VDE HRLKN+ S L+  L  F   +R+L+TGTPLQNNI E+  L+N
Sbjct: 472  DRAELGQFKWQFLAVDEAHRLKNAESSLYESLFDFKIANRLLITGTPLQNNIKELAALVN 531

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQK----VEELKKLVAPHMLRRLKKDAMQNIPPKTERM 996
            FL P  F    + E++ +  T +++    +++L+  + P +LRRLKKD  +++  KTER+
Sbjct: 532  FLMPGKF----TIEQEIDFETASEEQETYIKDLQSKIHPFILRRLKKDVEKSLHSKTERI 587

Query: 997  VPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD- 1055
            + VELS +Q  YY+ +LTKNY  L N G   AQ S+LN++ +L+K  NHPYL  G E   
Sbjct: 588  LRVELSDLQTHYYKNILTKNYAAL-NAGPKEAQISLLNVMAELKKTSNHPYLFDGAEEQV 646

Query: 1056 -----SGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIE 1110
                 S S E +    I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL   
Sbjct: 647  LANLGSSSRENIFRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRMLDILGDYLT-- 704

Query: 1111 FGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSD 1169
            F   +++R+DG+V    R+ AI  FN D S+ FVFLLSTR+ GLGINL TADTVII+DSD
Sbjct: 705  FKGYSFQRLDGTVPSARRRVAIDHFNADGSQDFVFLLSTRAGGLGINLMTADTVIIFDSD 764

Query: 1170 FNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD----QLFVNKSG 1225
            +NP AD+QAM RAHRIGQ   ++VYR V + +VEE +L+ A+KK++L+     L ++  G
Sbjct: 765  WNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGISDPG 824

Query: 1226 SQK---------EVEDILRWGTEELFNDSPG-------------------INGKDMGENN 1257
              K         E+ +IL++G   +F  S                     +   D+GE+N
Sbjct: 825  QTKKKSNEPSSGELSEILKFGAGNMFKASDNQKKLEDLNLDDVLNHAEDHVTTPDLGESN 884

Query: 1258 TSIEEAVRDLE 1268
               EE ++  E
Sbjct: 885  LGGEEFLKQFE 895


>gi|320581684|gb|EFW95903.1| Nucleosome remodeling factor [Ogataea parapolymorpha DL-1]
          Length = 1384

 Score =  464 bits (1195), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 287/732 (39%), Positives = 409/732 (55%), Gaps = 98/732 (13%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAKYGTTVINICDER-------- 660
            +E+++KW   S++HN+W     +K   V   +K++NY   Y   +IN  + R        
Sbjct: 194  FEYMIKWTNTSHLHNTWETYDAIKSRNVKGMKKVDNYINLY---IINDREIRKDPFVTRE 250

Query: 661  ------------------WKQPQRVI-----SLRSSKDGTREAFVKWTGLPYDECTWEKL 697
                              +K+ +R++     +L + +   R   VKW  L YDECTWE  
Sbjct: 251  DIEQMELENETRRENLQEYKKVERIVDSERVTLETGESDLR-YLVKWKRLNYDECTWESG 309

Query: 698  DEPALEKYSHLTDLFVQFE-RQTLKKDASEDELP--RGKGDCQQSEIVALTEQPEELKGG 754
             E A      +T    +F+ RQ  K       LP         +     LT QP  +K G
Sbjct: 310  SEIAPLAPQEVT----KFQNRQNSKI------LPGLSASYGSNRPRFEKLTSQPLFIKNG 359

Query: 755  ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPL 814
             L   QL  LNW+   W +++N ILADEMGLGKTV   +F+S L    +   P LV+VPL
Sbjct: 360  ELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIYARRQNGPHLVVVPL 419

Query: 815  STMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTT 874
            ST+P W   F  WAP++NV+ Y G  K+R  IR YE++       N+K    KFNVLLTT
Sbjct: 420  STVPAWQETFDKWAPDVNVIYYMGNTKSRKAIRDYEFYVGG----NRK--KVKFNVLLTT 473

Query: 875  YEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGE 934
            YE IL D + L    W+ L VDE HRLKN+ S L+  L+ F   +R+L+TGTPLQNN+ E
Sbjct: 474  YEYILKDRAELGSFKWQYLAVDEAHRLKNAESSLYESLSEFKVANRLLITGTPLQNNLKE 533

Query: 935  MYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTE 994
            +  L NFL P  F      +    +      ++ L+  + P +LRRLKKD   ++P KTE
Sbjct: 534  LAALCNFLMPGKFQIDQEIDFDTPNAEAEGYIKALQAEIKPFILRRLKKDVETSLPGKTE 593

Query: 995  RMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP 1054
            R++ VELS IQ EYY+ +LTKNY  L N G   +Q S+LNI+ +L+K  NHPYL  G E 
Sbjct: 594  RILRVELSDIQTEYYKNILTKNYGAL-NQGPRGSQISLLNIMAELKKASNHPYLFDGVEE 652

Query: 1055 D------SGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
                   S S E + +  I +S K+ LL  +L  L+++GHRVLIFSQM ++LDI+ DYL 
Sbjct: 653  HVLAKVGSHSRENILKGLIMSSGKMVLLDQLLNKLHRDGHRVLIFSQMVRILDIIGDYLQ 712

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYD 1167
            ++    +++R+DG++S   R+ AI  FN + S+ FVFLLSTR+ GLGINL TADTVII+D
Sbjct: 713  LK--GHSFQRLDGTISSHKRRLAIDHFNAEGSKDFVFLLSTRAGGLGINLMTADTVIIFD 770

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------ 1221
            SD+NP AD+QAM RAHRIGQ   ++VYR V + +VEE++L+ A++K++L+   +      
Sbjct: 771  SDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEQVLERARRKMILEYAIISLGITD 830

Query: 1222 -NKSGSQK-----EVEDILRWGTEELF--NDSPG-----------------INGKDMGEN 1256
             NKS ++      E+ +IL++G   +F  ND+                   +   D+GE+
Sbjct: 831  NNKSKTKAEPTSGELSEILKFGASNMFKSNDNQKKLENLDLEDVLNHAEDHVTTPDLGES 890

Query: 1257 NTSIEEAVRDLE 1268
            N   EE ++  E
Sbjct: 891  NLGGEEFLKQFE 902


>gi|427792891|gb|JAA61897.1| Putative chromatin remodeling complex swi/snf component swi2, partial
            [Rhipicephalus pulchellus]
          Length = 4185

 Score =  464 bits (1195), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/611 (43%), Positives = 358/611 (58%), Gaps = 54/611 (8%)

Query: 681  FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE 740
             VKW GL Y+E TWE  ++    K  H    F++F      KD    E  + K   + SE
Sbjct: 1488 LVKWRGLSYEESTWELEEDVDPLKVEH----FLRF------KDPPPKEKWKVKKRPKPSE 1537

Query: 741  IVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYC 800
               + E P    G  L  +QLE L+WL  CW+  +N ILADEMGLGKT+ +  FI+ +  
Sbjct: 1538 WKQIDESPVYKGGNTLREYQLEGLSWLTFCWYNGQNCILADEMGLGKTIQSLTFINEI-V 1596

Query: 801  EFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN 860
             +    P LV+ PLST+ NW  EF  W   LNV+ YHG + +R +I++YE +  D +N  
Sbjct: 1597 RYGINGPFLVIAPLSTIGNWQREFETWT-ELNVITYHGSSASRNMIQEYEMYYKD-ENGQ 1654

Query: 861  KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHR 920
            + T  YKF V++TT+E++L+D   L+ +PW   V+DE HRLKN   KL   L   + +H 
Sbjct: 1655 RITDVYKFQVMITTFEIVLSDCMELQALPWRACVIDEAHRLKNRNCKLLEGLRMLNLEHS 1714

Query: 921  VLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRR 980
            VLLTGTPLQNN+ E+++LLNFL+P+ F S  +F E+F DL T  +V++LK L+ P MLRR
Sbjct: 1715 VLLTGTPLQNNVEELFSLLNFLEPSRFSSTETFMEEFGDLKTEGQVDKLKALLKPMMLRR 1774

Query: 981  LKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLR 1040
            LK+D  +++ PK E +V VEL++IQ +YYRA+L +N+  L   G G    +++N +M+LR
Sbjct: 1775 LKEDVEKSLAPKEETIVEVELTNIQKKYYRAILERNFAFLTKGGVGTNVPNLMNTMMELR 1834

Query: 1041 KVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTL-LHSMLKV-------------LYKE 1086
            K C HPYLI G E      + L E R++    L + L+++++              L   
Sbjct: 1835 KCCIHPYLIKGAE-----EQILQEYRLQHGDSLDMTLNALVQASGKLVLLDKLLPKLKDG 1889

Query: 1087 GHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRF-NQDKSRFVFL 1145
            GHRVL+FSQM + LD+LEDYL  +  P  YER+DG V    RQAAI RF   D  RFVFL
Sbjct: 1890 GHRVLVFSQMVRCLDLLEDYLVHKRYP--YERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 1947

Query: 1146 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEER 1205
            L TR+ GLGINL  ADTV+I+DSD+NP  D+QA  R HRIGQSK + VYRL+ R + E  
Sbjct: 1948 LCTRAGGLGINLTAADTVVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLICRNTYERE 2007

Query: 1206 ILQLAKKKLMLDQLFVNKSGSQK------------EVEDILRWGTEELFNDSPGINGKDM 1253
            +   A  KL LD+  +    SQK            E+ED+LR G      D       D 
Sbjct: 2008 MFDKASLKLGLDRAVLQSMNSQKESVGTNQQLTKQEIEDLLRKGAYGAIMD-------DD 2060

Query: 1254 GENNTSIEEAV 1264
            GE N   EE +
Sbjct: 2061 GEGNNFCEEDI 2071


>gi|348540018|ref|XP_003457485.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like
            [Oreochromis niloticus]
          Length = 2599

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 278/674 (41%), Positives = 383/674 (56%), Gaps = 66/674 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTV-INICDERWKQPQRV-- 667
            EF VK+   S +H  W    QL+   +  +K++ +K K      +   DE    P  V  
Sbjct: 782  EFFVKYKNYSYLHCEWATLEQLEKDKRIHQKIKRFKTKQAQMRHLFQEDEEPFNPDYVEV 841

Query: 668  -----ISLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
                 +S    KD         VKW  LPY++ TWE    +DE  +E++       +Q  
Sbjct: 842  DRILDVSHSVDKDNGEPVIYYLVKWCSLPYEDATWELKEDVDEGKVEEFGK-----IQNR 896

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKN 776
            +  LK+ A              S    L E  E   G  L  +QLE +NWL   W+  +N
Sbjct: 897  QPRLKRAARPPA----------SSWKKLEETREYKNGNTLREYQLEGVNWLLFNWYNRQN 946

Query: 777  VILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
             ILADEMGLGKT+ + A +S +Y     + P LV+ PLST+ NW  EF+ W  N+N + Y
Sbjct: 947  CILADEMGLGKTIQSIALLSEVYAA-GVQGPFLVIAPLSTITNWEREFSTWT-NMNAIVY 1004

Query: 837  HGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVD 896
            HG   +R +I+QYE +  D D  +    +YKF+ L+TT+EM+L+D   LR + W  +++D
Sbjct: 1005 HGSLASRQMIQQYEMYCKD-DKEHLIPGAYKFDALITTFEMVLSDCPELREIAWRCVIID 1063

Query: 897  EGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEK 956
            E HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+PA FPS + F   
Sbjct: 1064 EAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSETEFLRD 1123

Query: 957  FNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKN 1016
            F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL+ IQ +YYRA+L +N
Sbjct: 1124 FGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTDIQKKYYRAILERN 1183

Query: 1017 YQILRNIGKGVAQQS----MLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFL 1062
            +  L     G +  S    +LN +M+LRK CNHPYLI G E           D  + +F 
Sbjct: 1184 FSFL---SLGASSNSNVPNLLNTMMELRKCCNHPYLINGAEEKIVAELREVYDPLAPDFH 1240

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL-NIEFGPKTYERVDG 1121
             +  I+++ KL LL  +L  L   GH+VLIFSQM + LDILEDYL N  +    YER+DG
Sbjct: 1241 LQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRY---LYERIDG 1297

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT +I+DSD+NP  D+QA  
Sbjct: 1298 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQA 1357

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG---------SQKEV 1230
            R HRIGQSK + VYRL+ R S E  +L  A  KL LD+ +  + SG         S+KE+
Sbjct: 1358 RCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKDSNIQQFSKKEI 1417

Query: 1231 EDILRWGTEELFND 1244
            ED+LR G      D
Sbjct: 1418 EDLLRKGAYAAIMD 1431


>gi|301607520|ref|XP_002933353.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Xenopus
            (Silurana) tropicalis]
          Length = 1809

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 282/718 (39%), Positives = 412/718 (57%), Gaps = 89/718 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPE---SQLKVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH +W  E    Q KV   +KLEN+K K                 Y + 
Sbjct: 309  QYLIKWKGWSYIHGTWESEDSLQQQKVKGLKKLENFKKKEEEIKQWLSKVSPEDVEYFSC 368

Query: 653  VINICDERWKQPQ---RVISLRSSKDGT-----------------REAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK  +                  E   KW GLPY EC
Sbjct: 369  QQELASELNKQYQIVERVIAVKTSKSSSGHSDFPVHSRKTSSSNEPEYLCKWMGLPYSEC 428

Query: 693  TWEKLDEPAL--EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEE 750
            +WE   + AL  +K+ H  D F        + ++    +   K   Q+   V L +QP  
Sbjct: 429  SWE---DGALVGKKFQHCIDSF------NCRNNSKTTPVKDCKVLRQRPRFVTLKKQPSY 479

Query: 751  LKGGAL--FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPC 808
            + G  L    +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+       P 
Sbjct: 480  IGGEGLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHLHLLYGPF 539

Query: 809  LVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKF 868
            L++VPLST+ +W  EF +WAP++NVV Y G   +R  IR+YEW       +++++   KF
Sbjct: 540  LLVVPLSTLTSWQREFEVWAPDINVVVYIGDLGSRNTIREYEW-------VHQQSKKMKF 592

Query: 869  NVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPL 928
            N LLTTYE++L D + L  + W  L VDE HRLKN  S L+  L  F    R+L+TGTPL
Sbjct: 593  NALLTTYEILLKDKAVLSSINWAFLGVDEAHRLKNDDSLLYKTLIEFKSNARLLITGTPL 652

Query: 929  QNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQN 988
            QN++ E+++LL+F+ P  F     FE++          + L K++ P +LRR+KKD  ++
Sbjct: 653  QNSLKELWSLLHFIMPEKFECWEDFEDQHGK-GRDNGYQSLHKVLEPFLLRRVKKDVEKS 711

Query: 989  IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYL 1048
            +P K E+++ VE+  +Q +YYR +LT+NY+ L    +G +    LNIVM+L+K CNH +L
Sbjct: 712  LPAKVEQILRVEMCVMQKQYYRWILTRNYKALSKGTRG-STSGFLNIVMELKKCCNHCFL 770

Query: 1049 IPGTEPDSGS-VEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
            I   E +  S ++ L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 771  IKPEETEKESRLDSLQSL-IRSSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 829

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 830  AIKHYP--FQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIF 887

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV R +VEE I++ AKKK++LD L +     
Sbjct: 888  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTRGTVEEDIIERAKKKMVLDHLVIQRMDT 947

Query: 1222 -------NKSGS-------QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SGS       + E+  IL++G  +LF ++    G+++      I+E +R
Sbjct: 948  TGRTVLDNNSGSSNCNPFNKDELAAILKFGAADLFKET---EGEELEPQEMDIDEILR 1002


>gi|357494019|ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
 gi|355518633|gb|AET00257.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
          Length = 1739

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 287/719 (39%), Positives = 413/719 (57%), Gaps = 78/719 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK-RKLENYKAKYGTTV----------INICD--- 658
            EFL+KW G+S++H  W   ++L+ L+  +K+ NY  K    +          I + D   
Sbjct: 455  EFLIKWKGQSHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDIRYRRAISREEIEVYDVSK 514

Query: 659  -------ERWKQPQRVISLRSSKDGTR----EAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                    +  Q +R+I+ R SKD +     E  VKW GL Y E TWEK  + A  ++S 
Sbjct: 515  EMDLEIIRQNSQVERIIADRISKDNSGNVVPEYLVKWQGLSYAEVTWEKDIDIAFAQHS- 573

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
            + +   +    +++    + +  + K   ++     L EQPE L GG L  +QLE LN+L
Sbjct: 574  IDEYKAREVAMSVQGKVVDSQRKKSKASLRK-----LEEQPEWLMGGKLRDYQLEGLNFL 628

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W    NVILADEMGLGKTV + + +  L    +   P LV+VPLST+ NW  EF  W
Sbjct: 629  VNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKW 688

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P++N++ Y G   +R + +QYE++     N  K     KFN LLTTYE+IL D + L  
Sbjct: 689  LPDMNIIVYVGTRASREVCQQYEFY-----NDKKPGKPIKFNALLTTYEVILKDKAVLSK 743

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W  L+VDE HRLKNS ++L++ L  FS ++++L+TGTPLQN++ E++ LL+FL P  F
Sbjct: 744  IKWNYLMVDEAHRLKNSEAQLYTSLLEFSTKNKLLITGTPLQNSVEELWALLHFLDPTKF 803

Query: 948  PSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
             S   F + + +L++  + E   L   + PH+LRR+ KD  +++PPK ER++ VE+S +Q
Sbjct: 804  KSKDEFVQNYKNLSSFHENELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQ 863

Query: 1006 AEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLH 1063
             +YY+ +L +N+Q   N+ KGV   Q S+LNIV++L+K CNHP+L    +   G      
Sbjct: 864  KQYYKWILERNFQ---NLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGGS 920

Query: 1064 -----EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
                 E  + +S KL +L  +L  L++  HRVLIFSQM ++LDIL  YL++      ++R
Sbjct: 921  DNSKLERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAQYLSLR--GFQFQR 978

Query: 1119 VDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DGS     RQ A+  FN   S  F FLLSTR+ GLGINLATADTVII+DSD+NP  D+Q
Sbjct: 979  LDGSTKSELRQQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 1038

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF--------------VNK 1223
            AM+RAHRIGQ   + +YR V   SVEE IL+ AKKK++LD L               V K
Sbjct: 1039 AMSRAHRIGQQDVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEVKK 1098

Query: 1224 SGS---QKEVEDILRWGTEELF----NDSP------GINGKDMGENNTSIEEAVRDLEQ 1269
             GS   + E+  ILR+G EELF    ND        G+N  ++ E    +EE   + EQ
Sbjct: 1099 GGSYFDKNELSAILRFGAEELFKEERNDEESKKRLLGMNIDEILERAEKVEEKTDEDEQ 1157


>gi|294659674|ref|XP_462077.2| DEHA2G12496p [Debaryomyces hansenii CBS767]
 gi|199434146|emb|CAG90563.2| DEHA2G12496p [Debaryomyces hansenii CBS767]
          Length = 1405

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 278/724 (38%), Positives = 401/724 (55%), Gaps = 82/724 (11%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKY----------------GTT 652
            + Y F VKW   S++HN+W   S LK     RK++NY  ++                   
Sbjct: 189  LDYLFKVKWSDASHLHNTWESWSTLKDFKGFRKVDNYIKQFIIMDREIRNDPLTTKEDIE 248

Query: 653  VINICDER-------WKQPQRVI-SLRSSKDGTRE--AFVKWTGLPYDECTWEKLDEPAL 702
             ++I  ER       + + +R++ S R+  DG  +   + KW  L YDEC+WE  +E A 
Sbjct: 249  AMDIDLERRRDEQNEYTEVERIVDSERAEVDGESQLQYYCKWKRLYYDECSWENAEEIAR 308

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLE 762
                 +T    + + + L        L       Q+     L +QP  +K G L   QL 
Sbjct: 309  IAPEQVTRYQQRLKSKILPN------LSANYPSNQRPRFEKLVKQPLFIKNGELRDFQLT 362

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNW+   W +++N ILADEMGLGKTV   +F+S L    +   P LV+VPLST+P W  
Sbjct: 363  GLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIYARRQNGPHLVVVPLSTVPAWQE 422

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
             F  W+P+LN + Y G  ++R  +R YE++  +    NK     KFN+LLTTYE IL D 
Sbjct: 423  TFEKWSPDLNCIYYLGNTESRRNLRNYEFYQGN----NKP----KFNILLTTYEYILKDR 474

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L  + W+ L VDE HRLKN+ S L+  L SF   +R+L+TGTPLQNNI E+  L NFL
Sbjct: 475  NELGAIKWQFLAVDEAHRLKNAESSLYESLKSFKVTNRLLITGTPLQNNIKELAALCNFL 534

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F      + +  D    Q +++L+K + P +LRRLKKD  +++P KTER++ VELS
Sbjct: 535  MPGKFNIEQEIDFESPDDQQEQYIKDLQKKIQPFILRRLKKDVEKSLPSKTERILRVELS 594

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE------PDS 1056
             +Q +YY+ ++TKNY  L N G   +Q S+LN++ +L+K  NHPYL  G E       +S
Sbjct: 595  DLQTDYYKNIITKNYSAL-NAGNKGSQISLLNVMSELKKASNHPYLFDGAEERALAKANS 653

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
             + + +    I +S K+ LL  +L  L KEGHRVLIFSQM ++LDIL DYL+I+     +
Sbjct: 654  NARDNVLRGIIMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRMLDILGDYLSIK--GYQF 711

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            +R+DG +    R+ +I  FN   S+ F FLLSTR+ GLGINL TADTV+I+DSD+NP AD
Sbjct: 712  QRLDGGIPSSQRRISIDHFNAPDSKDFAFLLSTRAGGLGINLMTADTVVIFDSDWNPQAD 771

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN------------K 1223
            +QAM RAHRIGQ   + VYR V + +VEE IL+ A+KK++L+   ++             
Sbjct: 772  LQAMARAHRIGQKNHVSVYRFVSKDTVEEEILERARKKMILEYAIISLGITDPSSTKSKT 831

Query: 1224 SGSQKEVEDILRWGTEELFNDSPG-------------------INGKDMGENNTSIEEAV 1264
              S  E+  IL++G   +F ++                     +   D+GE+N   EE +
Sbjct: 832  EPSANELTQILKFGAGNMFRENDNQKKLEDLNLDEVLNHAEDHVTTPDLGESNLGSEEFL 891

Query: 1265 RDLE 1268
            +  E
Sbjct: 892  KQFE 895


>gi|443721916|gb|ELU11024.1| hypothetical protein CAPTEDRAFT_167753 [Capitella teleta]
          Length = 1643

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 284/705 (40%), Positives = 409/705 (58%), Gaps = 84/705 (11%)

Query: 595  QEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAKYGT 651
            ++P + E A      +  ++L+KW G S+IHN+W   + L   KV   +K+ENYK K   
Sbjct: 200  EDPPIPEDA-----PMETQYLIKWKGWSHIHNTWESMATLNEQKVNGLKKMENYKRKMDD 254

Query: 652  T--------------------VINICDERWKQPQRVI---SLRSSKDGTREAFVKWTGLP 688
                                 +++  + ++ + +R++   + RSS     +  VKW GLP
Sbjct: 255  MNEWRSRANREDIEYFDCQEELVDDLNAKYCRVERIVKHTANRSSLSEFPDYLVKWEGLP 314

Query: 689  YDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG--KGDCQQSEIVALTE 746
            Y ECT+E  D   + +  H  D    + R+          +P    K    + + V L  
Sbjct: 315  YSECTYE--DGQLITQ--HFKDALHNYNRRN-----KSQSIPTKICKVLKYRPKFVPLKS 365

Query: 747  QPEEL---KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFK 803
            QP  +   +G  L  +QL+ LNW+   W K+ +VILADEMGLGKT+   +FI+SL    +
Sbjct: 366  QPSFIGDGRGLELRDYQLDGLNWMLNSWCKNNSVILADEMGLGKTIQVISFINSLMNLHQ 425

Query: 804  AKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEW-HASDPDNLNKK 862
               P LV+VPLST+ +W  EFALWA ++NVV Y G   +R +IR++EW H       NK+
Sbjct: 426  LYGPFLVVVPLSTIASWQKEFALWAEDINVVVYLGDVSSRNMIREHEWCHLG-----NKR 480

Query: 863  TSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVL 922
                KFNVLLTTYE++L D S L GV W  L VDE HRLKN  S L+  L SF+   R+L
Sbjct: 481  ---LKFNVLLTTYEILLKDKSFLGGVSWSFLGVDEAHRLKNDDSLLYKSLISFNTNMRML 537

Query: 923  LTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLK 982
            +TGTPLQN++ E+++LL+F+ P+ F     FE K      T     L + + P +LRR+K
Sbjct: 538  ITGTPLQNSLKELWSLLHFIMPSKFHKWEDFEHKHKSADKT-GFRNLHQELEPFLLRRVK 596

Query: 983  KDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKV 1042
            KD  +++P KTE+++ VE+S+IQ +YY+ +LTKNY+ L   G+     S +NIVM+L+K 
Sbjct: 597  KDVEKSLPAKTEQILRVEMSNIQKQYYKWILTKNYKALSKGGRSNVS-SFVNIVMELKKC 655

Query: 1043 CNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDI 1102
            CNH +L+    PD     F  +  ++   K+ LL  +L  L + GHRVLIFSQM +LLDI
Sbjct: 656  CNHGHLV--RNPDLSDPAFKGKDPLEVIVKI-LLDKLLMRLKESGHRVLIFSQMVRLLDI 712

Query: 1103 LEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATAD 1161
            L +YL +      ++R+DGS+    R+ A+  FN + S  F FLLSTR+ GLG+NLATAD
Sbjct: 713  LAEYLTMRRF--QFQRLDGSIKGEVRKQAMEHFNAEGSDDFCFLLSTRAGGLGVNLATAD 770

Query: 1162 TVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            TVII+DSD+NP  D+QA  RAHRIGQ K++ VYRLV + SVEE I++ AKKK++LD L +
Sbjct: 771  TVIIFDSDWNPQNDLQAQARAHRIGQKKQVSVYRLVTKGSVEEDIVERAKKKMVLDHLVI 830

Query: 1222 NKSG----------------------SQKEVEDILRWGTEELFND 1244
             +                        S++E+ DIL++GTEELF +
Sbjct: 831  QRMDTTGRTVLNRGGLSSQSGSSNPFSKQELNDILKFGTEELFKE 875


>gi|240279419|gb|EER42924.1| chromodomain helicase hrp3 [Ajellomyces capsulatus H143]
          Length = 1540

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 265/669 (39%), Positives = 386/669 (57%), Gaps = 84/669 (12%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVINIC---------DERW 661
            +EF +KW GKS+ H +W   ES +   + R+L+NY  K  +  I             E+W
Sbjct: 303  FEFYIKWQGKSHYHATWETVESLVSCRSVRRLDNYVRKTLSLEIQYARDPEIIPEEKEKW 362

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                          K+ +RVI  R   DG  E +VKW  L YD CTWE    PA      
Sbjct: 363  NLDRERDVDAIEDYKKAERVIGSREI-DGATEYYVKWKRLFYDCCTWE----PA------ 411

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQ--------------PEELKG 753
                       +L  + ++ E+ R    C    I +  E               P  ++ 
Sbjct: 412  -----------SLVSEIAQREIDRYLDRCSHPPISSKAESSPSTRAPFEPIHGTPSFVQN 460

Query: 754  GALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVP 813
            G L   Q++ +N++   W + +NV+LADEMGLGKTV   AFI+ L      + P +V+VP
Sbjct: 461  GELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRHQQGPFIVVVP 520

Query: 814  LSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLT 873
            LSTMP+W   F  W P+LN V Y+G   +R II++YE        ++      KF+VLLT
Sbjct: 521  LSTMPSWAETFDNWTPDLNYVVYNGNETSRNIIKEYELL------IDGNIKRPKFHVLLT 574

Query: 874  TYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIG 933
            TYE +L D++ L  + W+ + VDE HRLKN  S+L++ L  F    R+L+TGTP+QNN+G
Sbjct: 575  TYEYVLVDAAFLSQIKWQFMAVDEAHRLKNRESQLYAKLVEFKSPSRLLITGTPVQNNLG 634

Query: 934  EMYNLLNFLQPASFPSLSSFEEKFNDL---TTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
            E+  L++FL P     L   ++   DL     + K+ EL K + P+MLRR K     ++P
Sbjct: 635  ELSALMDFLNPG----LIQIDDDM-DLGCEAASVKLAELTKSIQPYMLRRTKSKVESDLP 689

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 1050
            PK+E+++ VELS IQ EYY+ +LTKNY  L   GKG  +QS+LNI+M+L+K  NHP++ P
Sbjct: 690  PKSEKIIRVELSDIQLEYYKNILTKNYAALNQGGKG-QKQSLLNIMMELKKASNHPFMFP 748

Query: 1051 GTEP-----DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILED 1105
              E       +G  E +  + I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL D
Sbjct: 749  NAESRILEGKTGREEMMRAL-ITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILAD 807

Query: 1106 YLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVI 1164
            Y+++      Y+R+DG+++ G R+ +I  FN  + S F FLLSTR+ GLGINL TADTV+
Sbjct: 808  YMDVR--GYAYQRLDGTIAAGPRRLSIEHFNAPESSDFAFLLSTRAGGLGINLMTADTVV 865

Query: 1165 IYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKS 1224
            ++DSD+NP AD+QAM RAHRIGQ++ + VYRLV + +VEE +L+ A+ KL+L+ + + + 
Sbjct: 866  LFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRG 925

Query: 1225 GSQKEVEDI 1233
             + KE  ++
Sbjct: 926  VTDKEATEL 934


>gi|392570143|gb|EIW63316.1| transcription regulator [Trametes versicolor FP-101664 SS1]
          Length = 1445

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 274/685 (40%), Positives = 391/685 (57%), Gaps = 81/685 (11%)

Query: 614  FLVKWVGKSNIHNS-WIPESQLKVLAKRKLENYKAKYGTTVINICDERWKQP-------- 664
            F +KW   S++HN+  + E   +    ++++NY   Y      I  ER K P        
Sbjct: 227  FHIKWKNFSHLHNTDEVYEFLKRFKGLKRVDNYIKAY-----KIDQERLKNPRLSREDLE 281

Query: 665  -------------------QRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE--PALE 703
                               +RVI+ R ++    E F KW GL Y+ CTWE  DE  P  +
Sbjct: 282  TILLRRERDKEELEMHKTVERVIAQRDNEQAVVEYFCKWNGLNYEHCTWELQDEIRPIAK 341

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPR-GKGDCQQSEIVALTEQPEEL--KGGALFPHQ 760
            +     D F + E +  K        PR G+ D ++     + E P  +   GG L   Q
Sbjct: 342  EQ---IDAFRKREAEA-KFPFKSAVYPRYGRPDFEK-----IKEDPPYIVDTGGELKDFQ 392

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            L  LNWL   W K +N ILADEMGLGKTV + +F+S L+ E +   P LV+VPLST+  W
Sbjct: 393  LTGLNWLAYLWSKGENGILADEMGLGKTVQSVSFLSYLFHERRQYGPFLVIVPLSTITAW 452

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
             ++FA WAP+++VV Y G A AR+  RQYE+  S            K NVLLTTYE+ L 
Sbjct: 453  QSQFATWAPDMHVVAYIGGAAARSTARQYEFGPS--------AKKLKMNVLLTTYEITLR 504

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D   L  + W+VL+VDE HRLKNS S+L+  L+ FS   +VL+TGTPLQNN+ E+ +L++
Sbjct: 505  DVKELGEIKWQVLMVDEAHRLKNSESQLYEALSGFSAASKVLITGTPLQNNVKELLSLMH 564

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
            FL P  F   + F+    D     K++EL K +   MLRRLK+D + ++P K+ER++ VE
Sbjct: 565  FLMPEKFQLTNEFD--LADADHEVKIKELHKQLESLMLRRLKRDVLTSLPTKSERILRVE 622

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            +S++Q  +Y+ +LTKN+Q L     G    S+LNI M+L+K  NHPYL  G E  + + +
Sbjct: 623  MSALQTHFYKNILTKNFQALVKSANGNNNISLLNIAMELKKAANHPYLFDGAEVRTDNSD 682

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             + +  + +S KL LL  +L  L ++GHRVLIFSQM ++LDIL DY+ +      ++R+D
Sbjct: 683  EILKGLVMSSGKLVLLDKLLARLRQDGHRVLIFSQMVRMLDILSDYMQMR--GYQHQRLD 740

Query: 1121 GSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G VS   R+ +I  FN   S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM
Sbjct: 741  GMVSSDARKKSIAHFNSPGSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAM 800

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN-----------KSG--- 1225
             RAHRIGQ   + VYR V + ++EE +L+ AKKK++L+   +N           K G   
Sbjct: 801  ARAHRIGQKSHVSVYRFVSKDTMEEDVLERAKKKMVLEYAIINQMDTSQAHLSSKGGAKD 860

Query: 1226 -------SQKEVEDILRWGTEELFN 1243
                   S+ E+  +L++G +++F+
Sbjct: 861  PAKADALSKDELHAVLKYGAQKIFD 885


>gi|393905983|gb|EJD74129.1| type III restriction enzyme [Loa loa]
          Length = 1138

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 278/692 (40%), Positives = 404/692 (58%), Gaps = 90/692 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKV-----LAK--------RKLENYKAKYGTTVINICD- 658
            ++L+KW+G S++HN+W  E+ LK+     L K        R +E +K       I   D 
Sbjct: 336  QYLIKWLGWSHLHNTWESENSLKLCNAKGLKKIDNYMKRLRDIEEWKLTADKEYIEFFDC 395

Query: 659  ---------ERWKQPQRVISLRSSKDGTR----EAFVKWTGLPYDECTWEKLDEPALEKY 705
                     E++K  +RVI+ + S+        E FVKW GLPY ECTWE+         
Sbjct: 396  EQQMNDELNEQYKVIERVIAHQISRGQGESEGMEYFVKWCGLPYSECTWEE--------- 446

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQP--EELKGGALF------ 757
             HL  +  QF+    K DA  D   R  G        AL ++P  E+L     F      
Sbjct: 447  EHL--IARQFQD---KIDAYYDR--RDNGKIPNKHCPALRKRPKFEKLNNIPNFLQRKDD 499

Query: 758  ------PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVL 811
                   +QLE +NW+   W K  + ILADEMGLGKT+ + +F+S LY +++     LV+
Sbjct: 500  PEHELRDYQLEGVNWMLHAWTKENSCILADEMGLGKTIQSISFLSVLYHKYQLYGTFLVV 559

Query: 812  VPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVL 871
            VPLST+ +W  EF  WAP+LNVV Y G   +R +IRQ+E +        + T   K NV+
Sbjct: 560  VPLSTIASWQREFETWAPDLNVVTYVGDITSRDLIRQFELYV-------QSTKRLKVNVV 612

Query: 872  LTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNN 931
            LTTYE++L D   L    W VL VDE HRLKN  S L+  L  F+  HR+L+TGTPLQN+
Sbjct: 613  LTTYEILLKDKFFLGSFEWTVLTVDEAHRLKNDESLLYRSLFEFTTNHRLLVTGTPLQNS 672

Query: 932  IGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPP 991
            + E++ LL+F+ P  F S   FE + +D +  + +  L + + P +LRR+KKD  +++P 
Sbjct: 673  LKELWALLHFIMPEKFDSWPEFEAEHHD-SDHKTIASLHRKLQPFLLRRVKKDVEKSLPA 731

Query: 992  KTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG 1051
            K E+++ V++++ Q +YY+ +LTKNY+ L    KG +    +N+VM+L+K CNH  L+  
Sbjct: 732  KVEQILRVDMTAQQKQYYKWILTKNYKELSKGVKG-SINGFVNLVMELKKCCNHSSLVRS 790

Query: 1052 T-EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIE 1110
              +P+ G+   L ++ +K+S KL LL  +L  L + GHRVLIFSQM  +LDI+++YL + 
Sbjct: 791  YDQPEEGADARLQQL-LKSSGKLILLDKLLCRLQETGHRVLIFSQMVMMLDIMQEYLQLR 849

Query: 1111 FGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSD 1169
              P   +R+DGS+    R+AA+  FN   S  F FLLSTR+ GLGINLATADTVII+DSD
Sbjct: 850  RFPS--QRLDGSMRSDLRKAALDHFNAPNSPDFCFLLSTRAGGLGINLATADTVIIFDSD 907

Query: 1170 FNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS--- 1226
            +NP  D+QAM+RAHRIGQ K++ +YRLV +ASVEE I++ AK+KL+LD L + +  +   
Sbjct: 908  WNPQNDLQAMSRAHRIGQKKQVNIYRLVTKASVEEEIVERAKRKLVLDHLIIQRMDTTGR 967

Query: 1227 ----------------QKEVEDILRWGTEELF 1242
                            ++++  IL++G EELF
Sbjct: 968  TVLSKTSATNGTMPFDKQDLAMILKFGAEELF 999


>gi|156843751|ref|XP_001644941.1| hypothetical protein Kpol_1025p2 [Vanderwaltozyma polyspora DSM
            70294]
 gi|156115595|gb|EDO17083.1| hypothetical protein Kpol_1025p2 [Vanderwaltozyma polyspora DSM
            70294]
          Length = 1507

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 282/683 (41%), Positives = 400/683 (58%), Gaps = 67/683 (9%)

Query: 612  YEFLVKWVGKSNIHNSWIP-ESQLKVLAKRKLENYKAKY----------------GTTVI 654
            +EFL+KW  +S +HN+W   ES   V   ++L+NY  ++                   V+
Sbjct: 237  FEFLIKWNDESYLHNTWESYESLGPVKGLKRLDNYCKQFIIQDQQIRLDPYITREDIEVM 296

Query: 655  NICDER-------WKQPQRVI-SLRSS-KDGTRE--AFVKWTGLPYDECTWEKLDEPALE 703
            ++  ER       ++ P+R+I S R + +DG+ +    VKW  L YDE TWE  ++  + 
Sbjct: 297  DMDMERRLDEFKEYEIPERIIDSDRITLEDGSTQLQYLVKWRRLNYDEATWENAND--IV 354

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGD---CQQSEIVALTEQPEELKGGALFPHQ 760
            K +   D    F+ ++  K      LP+        Q+     L+ QP  +K G L   Q
Sbjct: 355  KLA--PDQVRHFQSRSNSK-----ILPQYSSSHPATQRPPFEKLSVQPSFIKNGELRDFQ 407

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            L  +NW+   W K+ N ILADEMGLGKTV   AF+S L    +   P LV+VPLSTMP W
Sbjct: 408  LTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFLSWLVYARRQNGPHLVVVPLSTMPAW 467

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
               F  W+P+LN + Y G  K+R  IR+YE++ ++P    KK  + KFNVLLTTYE IL 
Sbjct: 468  QETFEKWSPDLNCIYYMGNQKSRDAIREYEFY-TNPQAKGKK--NIKFNVLLTTYEYILK 524

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D S L  V W+ L VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+  L+N
Sbjct: 525  DRSELGSVKWQFLAVDEAHRLKNAESSLYESLNSFKVSNRLLITGTPLQNNIKELAALVN 584

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
            FL P  F      + +  D      + +L + + P +LRRLKKD  +++P KTER++ VE
Sbjct: 585  FLMPGRFTIDQEIDFENQDEEQEHYIRDLHQRLQPFILRRLKKDVEKSLPSKTERILRVE 644

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP------ 1054
            LS +Q +YY+ +LTKNY  L    KG    S+LN++ +L+K  NHPYL    E       
Sbjct: 645  LSDVQTDYYKNILTKNYSALTAGTKG-GHFSLLNVMTELKKASNHPYLFDYAEERVLQKF 703

Query: 1055 DSGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFG 1112
              G++   + +R  I +S K+ LL  +L  L ++GHRVLIFSQM ++LDI+ DYL+I+  
Sbjct: 704  GDGNMSRENILRGLIMSSGKMVLLDQLLTRLKRDGHRVLIFSQMVRMLDIMGDYLSIK-- 761

Query: 1113 PKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFN 1171
               ++R+DG+V    R+ AI  FN  D +  VFLLSTR+ GLGINL TADTVII+DSD+N
Sbjct: 762  GINFQRLDGTVPSAQRRIAIDHFNAPDSNDDVFLLSTRAGGLGINLMTADTVIIFDSDWN 821

Query: 1172 PHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---------- 1221
            P AD+QAM RAHRIGQ   ++VYRLV + +VEE +L+ A+KK++L+   +          
Sbjct: 822  PQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGKVS 881

Query: 1222 --NKSGSQKEVEDILRWGTEELF 1242
              +K  S  E+ +IL++G   +F
Sbjct: 882  NKSKEPSAGELSEILKFGAGNMF 904


>gi|403172667|ref|XP_003331803.2| chromodomain-helicase-DNA-binding protein 1 [Puccinia graminis f. sp.
            tritici CRL 75-36-700-3]
 gi|375169944|gb|EFP87384.2| chromodomain-helicase-DNA-binding protein 1 [Puccinia graminis f. sp.
            tritici CRL 75-36-700-3]
          Length = 1824

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 276/693 (39%), Positives = 387/693 (55%), Gaps = 94/693 (13%)

Query: 614  FLVKWVGKSNIHNSWIP-ESQLKVLAKRKLENYKAKYGTTVINICDERWKQPQRVISLRS 672
            +L+KW G S++H++W   E   +    +KLENY       + N+    W     + S  S
Sbjct: 299  YLIKWQGYSHLHSTWESYEFAKQYRGFKKLENY-------IKNV----WMPENLINSDPS 347

Query: 673  SKDGTREAFV----------------------------------------KWTGLPYDEC 692
              D  REAF+                                        KW GL YD C
Sbjct: 348  YTDEDREAFMIERNRTREQVESYKIVERVLMDREAPPTLDIDHDHVEYLCKWQGLNYDAC 407

Query: 693  TWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK 752
            TWE  +  A      +     + + +T+   ++    P GK    +     + EQP+ +K
Sbjct: 408  TWEAEETIATIAAEQIAIYRARIDCKTVPYHST----PLGK---SRPVFDRIKEQPKYIK 460

Query: 753  -GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVL 811
             GG L   Q+  LNWL   WHK +N ILADEMGLGKTV  CAF+S L+   +   P L++
Sbjct: 461  VGGTLKDFQVTGLNWLAYVWHKGQNGILADEMGLGKTVQTCAFLSYLFHTMEQYGPFLIV 520

Query: 812  VPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVL 871
            VPLST+P W  + A WAP+LNV+ Y G   +R  IR+YE+    P  +       KFN+L
Sbjct: 521  VPLSTLPAWQMQCAQWAPDLNVIAYIGNKVSRQTIREYEF--GPPKKM-------KFNIL 571

Query: 872  LTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNN 931
            LTTYE+IL D + L  + W+ L VDE HRLK+S S+L+  L SF+ Q ++L+TGTPLQN+
Sbjct: 572  LTTYEIILKDRAELAHIKWQYLAVDEAHRLKSSESQLYEALMSFNIQSKLLITGTPLQNS 631

Query: 932  IGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPP 991
            + E+  L++FLQP  F  LS       D     K+++L   +   MLRRLKKD +Q++P 
Sbjct: 632  VKELLALMHFLQPDKF-DLSEGHFDLEDDEKEIKIKDLHNKLQSIMLRRLKKDVVQSLPT 690

Query: 992  KTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG 1051
            K+ER++ VE+S +Q  +Y+A+LT+NY  L       +Q S+LNI M+L+K  NHP+L PG
Sbjct: 691  KSERILRVEMSELQMFWYKAILTRNYAAL---ASSDSQVSLLNIAMELKKASNHPFLFPG 747

Query: 1052 TEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEF 1111
             EP + S E      +  S K+ LL  +L  L  EGHRVLIFSQM ++LDI+ DY++  +
Sbjct: 748  AEPMTDSKEAALRGVVVNSGKMILLDKLLTRLKAEGHRVLIFSQMVRMLDIMSDYMS--Y 805

Query: 1112 GPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDF 1170
                ++R+DG+V   +R+ AI  FN   S  F FLLSTR+ GLGINL TADTVII+DSD+
Sbjct: 806  RGYIFQRLDGTVPSEERRKAIGHFNAPGSPDFAFLLSTRAGGLGINLETADTVIIFDSDW 865

Query: 1171 NPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN-------- 1222
            NP  D+QAM RAHRIGQ   + VYRLV + +VEE +L+ AK+K++L+   +N        
Sbjct: 866  NPQNDLQAMARAHRIGQKNHVNVYRLVTKDTVEEDVLERAKRKMILEYAIINQMDTSGKH 925

Query: 1223 ---KSGSQKE-------VEDILRWGTEELFNDS 1245
               K  S+ E       +  IL++G   LF  S
Sbjct: 926  VGRKEASKPETTFNKDDLSAILKFGAANLFKSS 958


>gi|62740093|gb|AAH94093.1| LOC733207 protein [Xenopus laevis]
          Length = 1416

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 277/682 (40%), Positives = 395/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++ +KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 314  QYFLKWKGWSSIHNTWETEETLKQQNVKGMKKLDNYKKKEQEKKRWLKSASPEDIEYYNC 373

Query: 653  VINICDERWKQPQ---RVI--SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I  S + S  G  + F KW GLPY EC+WE   + AL  +K+
Sbjct: 374  QQELIDDLHKQYQIVERIIAHSNQKSAAGYPDYFCKWQGLPYSECSWE---DGALIAKKF 430

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D ++       +  +        K   Q+   VAL +QP  + G     L  +QL+
Sbjct: 431  QARIDEYIS------RNQSKTIPFKECKVLKQRPRFVALKKQPSYIGGNKQMELRDYQLD 484

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 485  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 544

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E  +WAP +N V Y G   +R +IR +EW       ++ +T   KFNV+LTTYE++L D 
Sbjct: 545  EIQIWAPLINSVVYLGDINSRNVIRTHEW-------MHPQTKRLKFNVVLTTYEILLKDK 597

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            S L GV W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL F+
Sbjct: 598  SFLGGVNWAFIGVDEAHRLKNDDSLLYKSLIDFKSNHRLLITGTPLQNSLKELWSLLQFI 657

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ VE+S
Sbjct: 658  MPEKFSSWEVFEEEHGK-GKEYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMS 716

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS--GSVE 1060
            + Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI   E +      E
Sbjct: 717  ASQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKAPEENEFYNRQE 775

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++L+IL +YL     P  ++R+D
Sbjct: 776  ALQHL-IRSSGKLILLDKLLVRLRERGNRVLIFSQMVRMLNILAEYLKSRQFP--FQRLD 832

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 833  GSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 892

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE I++ AKKK++LD L + +          +GS   
Sbjct: 893  ARAHRIGQKKQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPS 952

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 953  SSTPFNKEELSAILKFGAEELF 974


>gi|325089685|gb|EGC42995.1| chromodomain helicase [Ajellomyces capsulatus H88]
          Length = 1552

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 266/669 (39%), Positives = 385/669 (57%), Gaps = 84/669 (12%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVINIC---------DERW 661
            +EF +KW GKS+ H +W   ES     + R+L+NY  K  +  I             E+W
Sbjct: 315  FEFYIKWQGKSHYHATWETVESLASCRSVRRLDNYVRKTLSLEIQYARDPEIIPEEKEKW 374

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                          K+ +RVI  R   DG  E +VKW  L YD CTWE    PA      
Sbjct: 375  NLDRERDVDAIEDYKKAERVIGSREI-DGATEYYVKWKRLFYDCCTWE----PA------ 423

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQ--------------PEELKG 753
                       +L  + ++ E+ R    C    I +  E               P  ++ 
Sbjct: 424  -----------SLVSEIAQREIDRYLDRCSHPPISSKAESSPSTRAPFEPIHGTPSFVQN 472

Query: 754  GALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVP 813
            G L   Q++ +N++   W + +NV+LADEMGLGKTV   AFI+ L      + P +V+VP
Sbjct: 473  GELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRHQQGPFIVVVP 532

Query: 814  LSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLT 873
            LSTMP+W   F  W P+LN V Y+G   +R II++YE        ++      KF+VLLT
Sbjct: 533  LSTMPSWAETFDNWTPDLNYVVYNGNETSRNIIKEYELL------IDGNIKRPKFHVLLT 586

Query: 874  TYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIG 933
            TYE +L D++ L  + W+ + VDE HRLKN  S+L++ L  F    R+L+TGTP+QNN+G
Sbjct: 587  TYEYVLVDAAFLSQIKWQFMAVDEAHRLKNRESQLYAKLVEFKSPSRLLITGTPVQNNLG 646

Query: 934  EMYNLLNFLQPASFPSLSSFEEKFNDL---TTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
            E+  L++FL P     L   ++   DL     + K+ EL K + P+MLRR K     ++P
Sbjct: 647  ELSALMDFLNPG----LIQIDDDM-DLGCEAASVKLAELTKSIQPYMLRRTKSKVESDLP 701

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 1050
            PK+E+++ VELS IQ EYY+ +LTKNY  L   GKG  +QS+LNI+M+L+K  NHP++ P
Sbjct: 702  PKSEKIIRVELSDIQLEYYKNILTKNYAALNQGGKG-QKQSLLNIMMELKKASNHPFMFP 760

Query: 1051 GTEP-----DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILED 1105
              E       +G  E +  + I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL D
Sbjct: 761  NAESRILEGKTGREEMMRAL-ITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILAD 819

Query: 1106 YLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVI 1164
            Y++I      Y+R+DG+++ G R+ +I  FN  + S F FLLSTR+ GLGINL TADTV+
Sbjct: 820  YMDIR--GYAYQRLDGTIAAGPRRLSIEHFNAPESSDFAFLLSTRAGGLGINLMTADTVV 877

Query: 1165 IYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKS 1224
            ++DSD+NP AD+QAM RAHRIGQ++ + VYRLV + +VEE +L+ A+ KL+L+ + + + 
Sbjct: 878  LFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRG 937

Query: 1225 GSQKEVEDI 1233
             + KE  ++
Sbjct: 938  VTDKEATEL 946


>gi|194766405|ref|XP_001965315.1| GF24504 [Drosophila ananassae]
 gi|190617925|gb|EDV33449.1| GF24504 [Drosophila ananassae]
          Length = 3217

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/667 (39%), Positives = 386/667 (57%), Gaps = 60/667 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL-----KVLAK-RKLENYKAKYGTTVINICDERWK---- 662
            E+ VK+   S +H  W  E +L     +V AK R+ +  +++      NI +E +     
Sbjct: 1873 EYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFENIEEEPFNPDFT 1932

Query: 663  QPQRVISL-----RSSKDGTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQ 714
            +  RV+ +      +S + T+   VKW  LPY++CTWE    +D   +E+Y     + ++
Sbjct: 1933 EVDRVLDMSVHTDENSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPMR 1992

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKS 774
             E ++ K+   E             +   L + P    G +L P+QLE LNWL+  W+ +
Sbjct: 1993 CEWKSKKRPHPE-------------QWKKLEKTPVYKAGNSLRPYQLEGLNWLKFSWYNT 2039

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
             N ILADEMGLGKT+ +  F+ S+Y E+  + P LV+ PLST+PNW  EF  W  ++NVV
Sbjct: 2040 HNCILADEMGLGKTIQSLTFVHSVY-EYGIRGPFLVIAPLSTIPNWQREFEGWT-DMNVV 2097

Query: 835  EYHGCAKARAIIRQYE-WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
             YHG   ++ +I+ YE ++ ++   + K+    KFNVL+TT+EMI+ D   L+   W + 
Sbjct: 2098 VYHGSVTSKQMIQDYEFYYKTETGKVLKEP--IKFNVLITTFEMIVTDYMDLKAFNWRLC 2155

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
            V+DE HRLKN   KL   L   + +HRVLL+GTPLQNNI E+++LLNFL+P+ F S   F
Sbjct: 2156 VIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEF 2215

Query: 954  EEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAML 1013
              +F  L T ++V +L+ L+ P MLRRLK D  +++ PK E ++ VEL++IQ +YYR +L
Sbjct: 2216 MSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGIL 2275

Query: 1014 TKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---------SGSVEFLHE 1064
             +N+  L+         +++N +M+LRK C HPYL+ G E               E  ++
Sbjct: 2276 EQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKAQHGEDPESYYK 2335

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I ++ K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +ER+DG + 
Sbjct: 2336 NLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYP--FERIDGRIR 2393

Query: 1125 VGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQ AI R+++  S RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  R H
Sbjct: 2394 GNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCH 2453

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKSGSQKEVE 1231
            RIGQ K + +YRL+ R + E  +   A  KL LD+  +            NK  S+KE+E
Sbjct: 2454 RIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQLSKKEIE 2513

Query: 1232 DILRWGT 1238
            D+L+ G 
Sbjct: 2514 DLLKKGA 2520


>gi|366999422|ref|XP_003684447.1| hypothetical protein TPHA_0B03430 [Tetrapisispora phaffii CBS 4417]
 gi|357522743|emb|CCE62013.1| hypothetical protein TPHA_0B03430 [Tetrapisispora phaffii CBS 4417]
          Length = 1517

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 278/690 (40%), Positives = 394/690 (57%), Gaps = 73/690 (10%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQL-KVLAKRKLENYKAKY----------------GTT 652
             +YEFLVKW  KS +HN+W     L  +   ++L+NY  ++                   
Sbjct: 226  TNYEFLVKWSDKSYLHNTWESYDSLGPIKGIKRLDNYCKQFVIQDQQIRLDPYVTKEDLE 285

Query: 653  VINICDER-------WKQPQRVIS-----LRSSKDGTR-EAFVKWTGLPYDECTWEKLDE 699
            ++++  ER       ++ P+R+I      +   ++ T+ +  VKW  L YDE TWE  ++
Sbjct: 286  IMDMDLERRLDEFKEYEIPERIIDSDRVVIDEDENKTQLQYLVKWKRLNYDEATWEDSND 345

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKG--DCQQSEIVALTEQPEELKGGALF 757
                    +  L  Q  R    +  S+  LP+        + +   L EQP  +K G L 
Sbjct: 346  --------IVKLAPQQVRNFQSRSTSK-ILPQNSNIYSKDRPQFEKLDEQPSFIKNGELR 396

Query: 758  PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTM 817
              QL  +NW+   W K+ N ILADEMGLGKTV   AFIS L    +   P LV+VPLST+
Sbjct: 397  DFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIYARRQNGPHLVVVPLSTI 456

Query: 818  PNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSY-KFNVLLTTYE 876
            P W   F  WAP+LN + Y G  K+R +IR++E++     N N KT  + KFNVLLTTYE
Sbjct: 457  PAWQETFEKWAPDLNCIYYMGNQKSRDLIREFEFYT----NPNAKTKKHIKFNVLLTTYE 512

Query: 877  MILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMY 936
             IL D + L  + W+ L VDE HRLKN+ S L+  LNSF   +R+L+TGTPLQNNI E+ 
Sbjct: 513  YILKDRTELGNIKWQFLAVDEAHRLKNAESSLYESLNSFKVTNRLLITGTPLQNNIKELA 572

Query: 937  NLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERM 996
             L++FL P  F      + +  D    + +  L K + P +LRRLKKD  +++P KTER+
Sbjct: 573  ALVDFLMPNRFQIDQEIDFENQDSEQEEYIRTLHKRLQPFILRRLKKDVEKSLPSKTERI 632

Query: 997  VPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE--- 1053
            + VELS +Q EYY+ +LTKNY  L    KG    S+LNI+ +L+K  NHPYL    E   
Sbjct: 633  LRVELSDVQTEYYKNILTKNYSALTAGTKG-GHFSLLNIMSELKKASNHPYLFDYAEDRV 691

Query: 1054 -----PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
                   + S E +    I +S K+ L+  +L  L K+GHRVLIFSQM ++LDIL DYL+
Sbjct: 692  LQKFGDGNKSRENILRGLIMSSGKMVLVDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLS 751

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYD 1167
            I+     ++R+DG++    R+ AI  FN+  S   +FLLSTR+ GLGINL TADTVII+D
Sbjct: 752  IK--GINFQRLDGTIPSAQRRIAIDHFNEPGSTDDIFLLSTRAGGLGINLMTADTVIIFD 809

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------ 1221
            SD+NP AD+QAM RAHRIGQ   ++VYRLV + +VEE IL+ A+KK++L+   +      
Sbjct: 810  SDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEILERARKKMILEYAIISLGVTD 869

Query: 1222 ---------NKSGSQKEVEDILRWGTEELF 1242
                     +K  +  ++ +IL++G   +F
Sbjct: 870  GTNLSSKSKSKDPTSSDLAEILKFGAGNMF 899


>gi|239613379|gb|EEQ90366.1| chromodomain helicase [Ajellomyces dermatitidis ER-3]
          Length = 1513

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/661 (39%), Positives = 387/661 (58%), Gaps = 68/661 (10%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQL-KVLAKRKLENYKAKYGTTVINIC---------DERW 661
            +EF +KW GKS+ H +W   + L    + R+L+NY  K  T  I             E+W
Sbjct: 311  FEFYIKWQGKSHYHATWETVASLASCRSVRRLDNYIRKILTLEIQYARDPEIIPEEKEKW 370

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE------KLDEPA 701
                          K+ +RVI  R   DG  E +VKW  L YD CTWE      ++ +  
Sbjct: 371  NLDRERDVDAIEDYKKAERVIGSREI-DGETEYYVKWKRLFYDYCTWEPASLVSEIAQRE 429

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQL 761
            +++Y          +R +    +S+ E         ++    +   P  ++ G L   Q+
Sbjct: 430  IDRY---------LDRTSHPPISSKSE----SNPLTRAHFEPIHGTPSFVQNGELKEFQV 476

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
            + +N++   W + +NV+LADEMGLGKTV   AFI+ L      + P +V+VPLSTMP+W 
Sbjct: 477  KGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRNQQGPFIVVVPLSTMPSWA 536

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
              F  W P+LN V Y+G   AR II++YE        ++      KF+VLLTTYE +L D
Sbjct: 537  ETFDNWTPDLNYVVYNGNEAARNIIKEYELL------IDGNVRRPKFHVLLTTYEYVLVD 590

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
            ++ L  + W+ + VDE HRLKN  S+L++ L  F    R+L+TGTP+QNN+GE+  L++F
Sbjct: 591  ATFLSQIKWQFMAVDEAHRLKNRESQLYAKLFEFKSPSRLLITGTPVQNNLGELSALMDF 650

Query: 942  LQPASFPSLSSFEEKFNDL---TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            L P     L   +E   DL     + K+ EL K + P+MLRR K     ++PPK+E+++ 
Sbjct: 651  LNPG----LIQIDEDM-DLGCEAASVKLAELTKSIQPYMLRRTKSKVESDLPPKSEKIIR 705

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP---- 1054
            VELS IQ EYY+ +LTKNY  L    KG  +QS+LNI+M+L+K  NHP++ P  E     
Sbjct: 706  VELSDIQLEYYKNILTKNYAALNQGSKG-QKQSLLNIMMELKKASNHPFMFPNAESRILE 764

Query: 1055 -DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
              +G  E +  + I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DY+++    
Sbjct: 765  GKTGREEMMRAL-ITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVR--G 821

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              Y+R+DG+++ G R+ +I  FN  +S  F FLLSTR+ GLGINL TADTV+++DSD+NP
Sbjct: 822  YAYQRLDGTIAAGPRRLSIEHFNAPESNDFAFLLSTRAGGLGINLMTADTVVLFDSDWNP 881

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVED 1232
             AD+QAM RAHRIGQ++ + VYRLV + +VEE +L+ A+ KL+L+ + + +  + KE  +
Sbjct: 882  QADLQAMARAHRIGQTRPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGVTDKEATE 941

Query: 1233 I 1233
            +
Sbjct: 942  L 942


>gi|126291802|ref|XP_001381614.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Monodelphis
            domestica]
          Length = 2716

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 277/694 (39%), Positives = 391/694 (56%), Gaps = 58/694 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 315  FYVKYRNFSYLHCKWATMEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 374

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L +  E + 
Sbjct: 375  DRILEVAHTKDSDTGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQILPEIKH 434

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 435  VERPAS---------DSWQK----LEKSREYKNNNQLREYQLEGMNWLLFNWYNRKNCIL 481

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 482  ADEMGLGKTIQSITFLSEIFL-MGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 539

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 540  QISRQMIQQYEMLYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 598

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 599  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 658

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 659  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 718

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  S++F  +
Sbjct: 719  L---AKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--SLDFQLQ 773

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 774  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 831

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 832  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 891

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEE 1240
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+
Sbjct: 892  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLTKMEVED 951

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            L     G  G  M E +   +    D++Q  ++R
Sbjct: 952  LLRK--GAYGALMDEEDEGSKFCEEDIDQILQRR 983


>gi|427795099|gb|JAA63001.1| Putative chromatin remodeling complex swi/snf component swi2, partial
            [Rhipicephalus pulchellus]
          Length = 2086

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/614 (42%), Positives = 359/614 (58%), Gaps = 54/614 (8%)

Query: 678  REAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ 737
            +   VKW GL Y+E TWE  ++    K  H    F++F      KD    E  + K   +
Sbjct: 1125 KHYLVKWRGLSYEESTWELEEDVDPLKVEH----FLRF------KDPPPKEKWKVKKRPK 1174

Query: 738  QSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISS 797
             SE   + E P    G  L  +QLE L+WL  CW+  +N ILADEMGLGKT+ +  FI+ 
Sbjct: 1175 PSEWKQIDESPVYKGGNTLREYQLEGLSWLTFCWYNGQNCILADEMGLGKTIQSLTFINE 1234

Query: 798  LYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPD 857
            +   +    P LV+ PLST+ NW  EF  W   LNV+ YHG + +R +I++YE +  D +
Sbjct: 1235 I-VRYGINGPFLVIAPLSTIGNWQREFETWT-ELNVITYHGSSASRNMIQEYEMYYKD-E 1291

Query: 858  NLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSF 917
            N  + T  YKF V++TT+E++L+D   L+ +PW   V+DE HRLKN   KL   L   + 
Sbjct: 1292 NGQRITDVYKFQVMITTFEIVLSDCMELQALPWRACVIDEAHRLKNRNCKLLEGLRMLNL 1351

Query: 918  QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHM 977
            +H VLLTGTPLQNN+ E+++LLNFL+P+ F S  +F E+F DL T  +V++LK L+ P M
Sbjct: 1352 EHSVLLTGTPLQNNVEELFSLLNFLEPSRFSSTETFMEEFGDLKTEGQVDKLKALLKPMM 1411

Query: 978  LRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVM 1037
            LRRLK+D  +++ PK E +V VEL++IQ +YYRA+L +N+  L   G G    +++N +M
Sbjct: 1412 LRRLKEDVEKSLAPKEETIVEVELTNIQKKYYRAILERNFAFLTKGGVGTNVPNLMNTMM 1471

Query: 1038 QLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTL-LHSMLKV-------------L 1083
            +LRK C HPYLI G E      + L E R++    L + L+++++              L
Sbjct: 1472 ELRKCCIHPYLIKGAE-----EQILQEYRLQHGDSLDMTLNALVQASGKLVLLDKLLPKL 1526

Query: 1084 YKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRF-NQDKSRF 1142
               GHRVL+FSQM + LD+LEDYL  +  P  YER+DG V    RQAAI RF   D  RF
Sbjct: 1527 KDGGHRVLVFSQMVRCLDLLEDYLVHKRYP--YERIDGRVRGNLRQAAIDRFCKPDSDRF 1584

Query: 1143 VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASV 1202
            VFLL TR+ GLGINL  ADTV+I+DSD+NP  D+QA  R HRIGQSK + VYRL+ R + 
Sbjct: 1585 VFLLCTRAGGLGINLTAADTVVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLICRNTY 1644

Query: 1203 EERILQLAKKKLMLDQLFVNKSGSQK------------EVEDILRWGTEELFNDSPGING 1250
            E  +   A  KL LD+  +    SQK            E+ED+LR G      D      
Sbjct: 1645 EREMFDKASLKLGLDRAVLQSMNSQKESVGTNQQLTKQEIEDLLRKGAYGAIMD------ 1698

Query: 1251 KDMGENNTSIEEAV 1264
             D GE N   EE +
Sbjct: 1699 -DDGEGNNFCEEDI 1711


>gi|225559675|gb|EEH07957.1| chromodomain helicase hrp3 [Ajellomyces capsulatus G186AR]
          Length = 1552

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 265/669 (39%), Positives = 385/669 (57%), Gaps = 84/669 (12%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVINIC---------DERW 661
            +EF +KW GKS+ H +W   ES     + R+L+NY  K  +  I             E+W
Sbjct: 315  FEFYIKWQGKSHYHATWETVESLASCRSVRRLDNYVRKTLSLEIQYARDPEIIPEEKEKW 374

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                          K+ +RVI  R   DG  E +VKW  L YD CTWE    PA      
Sbjct: 375  NLDRERDVDAIEDYKKAERVIGSREI-DGATEYYVKWKRLFYDCCTWE----PA------ 423

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQ--------------PEELKG 753
                       +L  + ++ E+ R    C    I +  E               P  ++ 
Sbjct: 424  -----------SLVSEIAQREIDRYLDRCSHPPISSKAESSPSTRAPFEPIHGTPSFVQN 472

Query: 754  GALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVP 813
            G L   Q++ +N++   W + +NV+LADEMGLGKTV   AFI+ L      + P +V+VP
Sbjct: 473  GELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRHQQGPFIVVVP 532

Query: 814  LSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLT 873
            LSTMP+W   F  W P+LN V Y+G   +R II++YE        ++      KF+VLLT
Sbjct: 533  LSTMPSWAETFDNWTPDLNYVVYNGNETSRNIIKEYELL------IDGNIKRPKFHVLLT 586

Query: 874  TYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIG 933
            TYE +L D++ L  + W+ + VDE HRLKN  S+L++ L  F    R+L+TGTP+QNN+G
Sbjct: 587  TYEYVLVDAAFLSQIKWQFMAVDEAHRLKNRESQLYAKLVEFKSPSRLLITGTPVQNNLG 646

Query: 934  EMYNLLNFLQPASFPSLSSFEEKFNDL---TTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
            E+  L++FL P     L   ++   DL     + K+ EL K + P+MLRR K     ++P
Sbjct: 647  ELSALMDFLNPG----LIQIDDDM-DLGCEAASVKLAELTKSIQPYMLRRTKSKVESDLP 701

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 1050
            PK+E+++ VELS IQ EYY+ +LTKNY  L   GKG  +QS+LNI+M+L+K  NHP++ P
Sbjct: 702  PKSEKIIRVELSDIQLEYYKNILTKNYAALNQGGKG-QKQSLLNIMMELKKASNHPFMFP 760

Query: 1051 GTEP-----DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILED 1105
              E       +G  E +  + I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL D
Sbjct: 761  NAESRILEGKTGREEMMRAL-ITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILAD 819

Query: 1106 YLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVI 1164
            Y+++      Y+R+DG+++ G R+ +I  FN  + S F FLLSTR+ GLGINL TADTV+
Sbjct: 820  YMDVR--GYAYQRLDGTIAAGPRRLSIEHFNAPESSDFAFLLSTRAGGLGINLMTADTVV 877

Query: 1165 IYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKS 1224
            ++DSD+NP AD+QAM RAHRIGQ++ + VYRLV + +VEE +L+ A+ KL+L+ + + + 
Sbjct: 878  LFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRG 937

Query: 1225 GSQKEVEDI 1233
             + KE  ++
Sbjct: 938  VTDKEATEL 946


>gi|429864066|gb|ELA38441.1| chromo domain-containing protein 1 [Colletotrichum gloeosporioides
            Nara gc5]
          Length = 1605

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/642 (40%), Positives = 381/642 (59%), Gaps = 54/642 (8%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYK---------AKYGTTVI-----NI 656
            +E+ +KW GKS++H++W     L+ L   R++ENY           ++G  +        
Sbjct: 296  FEYYIKWQGKSHMHDTWETTDTLRGLRGYRRIENYYRAVVEHELYIRFGDDIAPENKEQF 355

Query: 657  CDERWKQPQ---------RVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
              ER ++ +         RV+++R   DG  E  VKW G  YDECTWE       E +  
Sbjct: 356  FLERERKEEALEDFTKVDRVVAVRDGDDGD-EYLVKWKGCYYDECTWEAASAINAE-FQD 413

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D ++    ++   D  E           ++ +  L  QP+ +KGG L   QL  LN+L
Sbjct: 414  KIDQYLDRSSRSWVSDRKE------SNPDTRTRMTKLEAQPDYIKGGELRSFQLRGLNFL 467

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W ++ NVILADEMGLGKTV + +F+S L  E + + P L++ PLS +P W   F  W
Sbjct: 468  CLNWTRANNVILADEMGLGKTVQSVSFLSWLRNEREQEGPFLIVAPLSVIPAWGDTFDNW 527

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            +P++N V Y G   AR  IR+ E        +N      KFN L+T+YEMIL D   L  
Sbjct: 528  SPDMNYVVYLGNETARNTIRENELI------VNGNPKKPKFNALITSYEMILQDWQFLST 581

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ L+VDE HRLKN  S+L+  L SF    ++L+TGTP+QNN+ E+  L++FL P   
Sbjct: 582  IKWQALLVDEAHRLKNKESQLYQRLVSFGIPCKILITGTPIQNNLAELSALMDFLNPGKV 641

Query: 948  PSLSSFEEKFNDLT---TTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
                  +E+   L      +K+++L K +AP++LRR K+    ++PPKTE+++ VELS +
Sbjct: 642  ----IIDEELESLAGNDAQEKLQDLHKSIAPYILRRTKETVESDLPPKTEKIIRVELSDV 697

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFL 1062
            Q EYY+ +LT+NY  L +      + S+LNI+M+L+KV NHPY+  G E    +GS    
Sbjct: 698  QLEYYKNILTRNYAALSDATG--QKNSLLNIMMELKKVSNHPYMFAGAEDRVLAGSTRRE 755

Query: 1063 HEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             +++  I +S K+ LL  +L  L K+GHRVLIFSQM K+LDIL DY+ +  G K ++R+D
Sbjct: 756  DQIKGLIASSGKMMLLDQLLTKLRKDGHRVLIFSQMVKMLDILSDYMVLR-GYK-FQRLD 813

Query: 1121 GSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++ G R+ AI  FN +D   F FLLSTR+ GLGINL TADTV+I+DSD+NP AD+QAM
Sbjct: 814  GTIAAGPRRLAINHFNAEDSEDFCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAM 873

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
             RAHRIGQ K + +YRLV + +VEE +L+ A+ KL+L+ L +
Sbjct: 874  GRAHRIGQKKPVSIYRLVSKETVEEEVLERARNKLLLEYLTI 915


>gi|312378128|gb|EFR24784.1| hypothetical protein AND_10400 [Anopheles darlingi]
          Length = 2623

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 283/696 (40%), Positives = 402/696 (57%), Gaps = 76/696 (10%)

Query: 602  SAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENY-----------KA 647
            S ++    +  ++L+KW G S +H +W  E  LK   V   +KLENY           + 
Sbjct: 402  SGKLASGELEEQYLIKWSGWSYLHCTWESEETLKEQKVKGLKKLENYVKREATLQHWRRY 461

Query: 648  KYGTTVINI--CDERWKQP--------QRVISLRSSKDGTR--EAFVKWTGLPYDECTWE 695
            + G   I+   C +  +Q         +R+I+  +  +G    +   KW  LPY + TWE
Sbjct: 462  QAGPEDIDYYECQQELQQDLLKSYYNVERIIAQAAKAEGGEGSDYLCKWESLPYSDSTWE 521

Query: 696  KLDEPALEKYSHLTDLFVQF-ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL--- 751
              D   L K        V+F ER+  +   S+      K    + +   L  QPE L   
Sbjct: 522  --DASLLRK--KWQKKVVEFHEREESRCTPSK----YSKAIHDRPKFRHLKTQPEYLGED 573

Query: 752  KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVL 811
            +G  L  +Q++ LNWL   W K  +VILADEMGLGKT+    F+  L+   +   P L +
Sbjct: 574  RGLKLRDYQMDGLNWLILTWCKKNSVILADEMGLGKTIQTICFLYYLFKSQQLYGPFLCV 633

Query: 812  VPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVL 871
            VPLSTMP W  EFA+WAP +N V Y G  ++R +IRQYEW          +T   KFN +
Sbjct: 634  VPLSTMPAWQREFAIWAPEMNFVTYLGDVQSREMIRQYEW-------CFDRTKKLKFNAI 686

Query: 872  LTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNN 931
            LTTYE++L D + L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN+
Sbjct: 687  LTTYEILLKDKTFLGSISWASLLVDEAHRLKNDDSLLYKALKEFDTNHRLLITGTPLQNS 746

Query: 932  IGEMYNLLNFLQPASFPSLSSFEEKF-NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
            + E++ LL+F+ P  F +  SFE  + ND + T    EL K + P++LRR+KKD  +++P
Sbjct: 747  LKELWALLHFIMPQRFETWDSFERNYGNDKSYT----ELHKELEPYILRRVKKDVEKSLP 802

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 1050
             K E+++ VE++SIQ +YYR +LT+N+  LR   KG A  + LNIV++L+K CNH  L  
Sbjct: 803  AKVEQILRVEMTSIQRQYYRWILTRNFDALRKGLKGSAN-TFLNIVIELKKCCNHAMLTR 861

Query: 1051 GTEPDS--GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
              E D+     + L ++ +K S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL 
Sbjct: 862  PVEFDAQVNQDDVLQQL-LKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQ 920

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYD 1167
                  +Y+R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLATADTVII+D
Sbjct: 921  KRH--FSYQRLDGSIKGELRRQALDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFD 978

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------ 1221
            SD+NP  D+QA  RAHRIGQ  ++ +YRLV   SVEE I++ AKKK++LD L +      
Sbjct: 979  SDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEENIVERAKKKMVLDHLVIQRMDTT 1038

Query: 1222 -----NKSG--------SQKEVEDILRWGTEELFND 1244
                 +K+G        +++E+  IL++GTEELF +
Sbjct: 1039 GRTVLDKNGGSNTSNPFNKEELSAILKFGTEELFKE 1074


>gi|410907243|ref|XP_003967101.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 2-like [Takifugu rubripes]
          Length = 1764

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 275/703 (39%), Positives = 395/703 (56%), Gaps = 92/703 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW   S IHN+W   + L   KV   +KL+NYK K                 +   
Sbjct: 320  QYLIKWKDWSYIHNTWESMASLMQQKVKGLKKLDNYKRKHEELDSWLRKASPEDVEFHNC 379

Query: 653  VINICDERWKQPQ---RVISLRSSKDGTREAF----------------VKWTGLPYDECT 693
               +  E  KQ Q   RVI+ R+ K      F                 KW GLPY EC+
Sbjct: 380  QQELTAELSKQFQVVERVIATRTGKASGSSDFPSHSHKNTSSNEPEYLCKWMGLPYSECS 439

Query: 694  WEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDC----QQSEIVALTEQPE 749
            WE  D    +K+    D F+   R + K   S+D        C    Q+   VAL +QP 
Sbjct: 440  WED-DSLVKKKFQLCIDSFMN--RNSSKTVPSKD--------CKVLKQRPRFVALKKQPS 488

Query: 750  ELKGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLP 807
             +      L  +QL+ LNWL   W +  +VILADEMGLGKT+   +F+S L+ + +   P
Sbjct: 489  FIGDDNLQLRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGP 548

Query: 808  CLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYK 867
             L++VPLST+ +W  EF  WAP++NVV Y G   +R  IR YEW       +N +T   +
Sbjct: 549  FLLVVPLSTLSSWQREFETWAPDMNVVVYLGDVMSRKTIRDYEW-------VNHQTKRIR 601

Query: 868  FNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTP 927
            FN LLTTYE++L D   L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTP
Sbjct: 602  FNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLMEFRSNHRLLITGTP 661

Query: 928  LQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQ 987
            LQN++ E+++LL+FL P  F S   FE+             L +++ P +LRR+KKD  +
Sbjct: 662  LQNSLKELWSLLHFLMPDKFDSWEDFEDDHGK-GRDNGYHSLHRVLEPFLLRRVKKDVEK 720

Query: 988  NIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPY 1047
            ++P K E+++ V++S+ Q ++Y+ +LT+NY+ L    +G +    LNIVM+L+K CNH +
Sbjct: 721  SLPAKVEQILRVDMSAQQKQFYKWILTRNYKALSKGTRG-SSSGFLNIVMELKKCCNHSF 779

Query: 1048 LIPGTEPDSGSVEFLHEMR---IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILE 1104
            LI   +PD G  E   E     ++ S KL LL  +L  L + G+RVLIFSQM ++LDIL 
Sbjct: 780  LI--KQPDDGETETYQEQLQGVVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILA 837

Query: 1105 DYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTV 1163
            +YL  +  P  ++R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV
Sbjct: 838  EYLTRKRYP--FQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTV 895

Query: 1164 IIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK 1223
            +I+DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L + +
Sbjct: 896  VIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQR 955

Query: 1224 SGS-------------------QKEVEDILRWGTEELFNDSPG 1247
              +                   ++E+  IL++G EELF ++ G
Sbjct: 956  MDTTGRTVLDSSSRNTNSNPFNKEELTAILKFGAEELFKEAEG 998


>gi|327351880|gb|EGE80737.1| chromodomain helicase hrp3 [Ajellomyces dermatitidis ATCC 18188]
          Length = 1549

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/661 (39%), Positives = 387/661 (58%), Gaps = 68/661 (10%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQL-KVLAKRKLENYKAKYGTTVINIC---------DERW 661
            +EF +KW GKS+ H +W   + L    + R+L+NY  K  T  I             E+W
Sbjct: 311  FEFYIKWQGKSHYHATWETVASLASCRSVRRLDNYIRKILTLEIQYARDPEIIPEEKEKW 370

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE------KLDEPA 701
                          K+ +RVI  R   DG  E +VKW  L YD CTWE      ++ +  
Sbjct: 371  NLDRERDVDAIEDYKKAERVIGSREI-DGETEYYVKWKRLFYDYCTWEPASLVSEIAQRE 429

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQL 761
            +++Y          +R +    +S+ E         ++    +   P  ++ G L   Q+
Sbjct: 430  IDRY---------LDRTSHPPISSKSE----SNPLTRAHFEPIHGTPSFVQNGELKEFQV 476

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
            + +N++   W + +NV+LADEMGLGKTV   AFI+ L      + P +V+VPLSTMP+W 
Sbjct: 477  KGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRNQQGPFIVVVPLSTMPSWA 536

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
              F  W P+LN V Y+G   AR II++YE        ++      KF+VLLTTYE +L D
Sbjct: 537  ETFDNWTPDLNYVVYNGNEAARNIIKEYELL------IDGNVRRPKFHVLLTTYEYVLVD 590

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
            ++ L  + W+ + VDE HRLKN  S+L++ L  F    R+L+TGTP+QNN+GE+  L++F
Sbjct: 591  ATFLSQIKWQFMAVDEAHRLKNRESQLYAKLFEFKSPSRLLITGTPVQNNLGELSALMDF 650

Query: 942  LQPASFPSLSSFEEKFNDL---TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            L P     L   +E   DL     + K+ EL K + P+MLRR K     ++PPK+E+++ 
Sbjct: 651  LNPG----LIQIDEDM-DLGCEAASVKLAELTKSIQPYMLRRTKSKVESDLPPKSEKIIR 705

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP---- 1054
            VELS IQ EYY+ +LTKNY  L    KG  +QS+LNI+M+L+K  NHP++ P  E     
Sbjct: 706  VELSDIQLEYYKNILTKNYAALNQGSKG-QKQSLLNIMMELKKASNHPFMFPNAESRILE 764

Query: 1055 -DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
              +G  E +  + I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DY+++    
Sbjct: 765  GKTGREEMMRAL-ITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVR--G 821

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              Y+R+DG+++ G R+ +I  FN  +S  F FLLSTR+ GLGINL TADTV+++DSD+NP
Sbjct: 822  YAYQRLDGTIAAGPRRLSIEHFNAPESNDFAFLLSTRAGGLGINLMTADTVVLFDSDWNP 881

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVED 1232
             AD+QAM RAHRIGQ++ + VYRLV + +VEE +L+ A+ KL+L+ + + +  + KE  +
Sbjct: 882  QADLQAMARAHRIGQTRPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGVTDKEATE 941

Query: 1233 I 1233
            +
Sbjct: 942  L 942


>gi|261194801|ref|XP_002623805.1| chromodomain helicase [Ajellomyces dermatitidis SLH14081]
 gi|239588343|gb|EEQ70986.1| chromodomain helicase [Ajellomyces dermatitidis SLH14081]
          Length = 1513

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/661 (39%), Positives = 387/661 (58%), Gaps = 68/661 (10%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQL-KVLAKRKLENYKAKYGTTVINIC---------DERW 661
            +EF +KW GKS+ H +W   + L    + R+L+NY  K  T  I             E+W
Sbjct: 311  FEFYIKWQGKSHYHATWETVASLASCRSVRRLDNYIRKILTLEIQYARDPEIIPEEKEKW 370

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE------KLDEPA 701
                          K+ +RVI  R   DG  E +VKW  L YD CTWE      ++ +  
Sbjct: 371  NLDRERDVDAIEDYKKAERVIGSREI-DGETEYYVKWKRLFYDYCTWEPASLVSEIAQRE 429

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQL 761
            +++Y          +R +    +S+ E         ++    +   P  ++ G L   Q+
Sbjct: 430  IDRY---------LDRTSHPPISSKSE----SNPLTRAHFEPIHGTPSFVQNGELKEFQV 476

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
            + +N++   W + +NV+LADEMGLGKTV   AFI+ L      + P +V+VPLSTMP+W 
Sbjct: 477  KGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRNQQGPFIVVVPLSTMPSWA 536

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
              F  W P+LN V Y+G   AR II++YE        ++      KF+VLLTTYE +L D
Sbjct: 537  ETFDNWTPDLNYVVYNGNEAARNIIKEYELL------IDGNVRRPKFHVLLTTYEYVLVD 590

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
            ++ L  + W+ + VDE HRLKN  S+L++ L  F    R+L+TGTP+QNN+GE+  L++F
Sbjct: 591  ATFLSQIKWQFMAVDEAHRLKNRESQLYAKLFEFKSPSRLLITGTPVQNNLGELSALMDF 650

Query: 942  LQPASFPSLSSFEEKFNDL---TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            L P     L   +E   DL     + K+ EL K + P+MLRR K     ++PPK+E+++ 
Sbjct: 651  LNPG----LIQIDEDM-DLGCEAASVKLAELTKSIQPYMLRRTKSKVESDLPPKSEKIIR 705

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP---- 1054
            VELS IQ EYY+ +LTKNY  L    KG  +QS+LNI+M+L+K  NHP++ P  E     
Sbjct: 706  VELSDIQLEYYKNILTKNYAALNQGSKG-QKQSLLNIMMELKKASNHPFMFPNAESRILE 764

Query: 1055 -DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
              +G  E +  + I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DY+++    
Sbjct: 765  GKTGREEMMRAL-ITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVR--G 821

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              Y+R+DG+++ G R+ +I  FN  +S  F FLLSTR+ GLGINL TADTV+++DSD+NP
Sbjct: 822  YAYQRLDGTIAAGPRRLSIEHFNAPESNDFAFLLSTRAGGLGINLMTADTVVLFDSDWNP 881

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVED 1232
             AD+QAM RAHRIGQ++ + VYRLV + +VEE +L+ A+ KL+L+ + + +  + KE  +
Sbjct: 882  QADLQAMARAHRIGQTRPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGVTDKEATE 941

Query: 1233 I 1233
            +
Sbjct: 942  L 942


>gi|157821521|ref|NP_001101267.1| chromodomain-helicase-DNA-binding protein 6 [Rattus norvegicus]
 gi|149043033|gb|EDL96607.1| chromodomain helicase DNA binding protein 6 (predicted) [Rattus
            norvegicus]
          Length = 2698

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 277/692 (40%), Positives = 389/692 (56%), Gaps = 54/692 (7%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 317  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYIEI 376

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L +  E + 
Sbjct: 377  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQILPEVKP 436

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L    E      L  +QLE +NWL   W+  KN IL
Sbjct: 437  VERPAS---------DAWQK----LETSREYKNSNRLREYQLEGMNWLLFNWYNRKNCIL 483

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ + AF+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 484  ADEMGLGKTIQSIAFLSEIFVR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 541

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +V+DE H
Sbjct: 542  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVVIDEAH 600

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 601  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 660

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 661  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 720

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMR 1066
            L    KG  Q +M N++   M+LRK CNHPYLI G E            S + +F  +  
Sbjct: 721  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAM 777

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVG 1126
            I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V   
Sbjct: 778  IQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVRGN 835

Query: 1127 DRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1185
             RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRI
Sbjct: 836  LRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 895

Query: 1186 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEELF 1242
            GQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+L 
Sbjct: 896  GQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLL 955

Query: 1243 NDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
                G  G  M E +   +    D++Q  ++R
Sbjct: 956  RK--GAYGALMDEEDEGSKFCEEDIDQILQRR 985


>gi|340377289|ref|XP_003387162.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like
            [Amphimedon queenslandica]
          Length = 1906

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 297/789 (37%), Positives = 434/789 (55%), Gaps = 73/789 (9%)

Query: 488  RIQVYRRSVTKECKVTKECKGENAIDLLREDDKDSDPVAVNGKVQDESAVSTEDL---GE 544
            RI+  R+    +  ++ E   E   D+++   + +      G   DES    E L   G 
Sbjct: 753  RIKGQRKHYVDDVSISDE---ETLDDIMQPPPRKTGFYGYTGPPDDESDYD-EGLMVGGM 808

Query: 545  RNDKMVVEDADVSLRDNEGLTVSEIHITCESTDKDVDVGKKTSGSVAKRVQEP--AVTES 602
            +  K       +++   EG   S+I++   + + +V V K  S  +         A  + 
Sbjct: 809  KGGKSSRYKKSITINPTEGFQYSDIYVDAPAEEANV-VEKILSHRMRPNTNTGTGASDDG 867

Query: 603  AQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVI--NIC 657
            A+ +G+ +  E+LVK+   S IH  W    +L    KR   K++ YK K     I  NI 
Sbjct: 868  AKKQGEFIE-EYLVKYKNYSYIHAEWATFDKLLRGDKRFDGKVKRYKQKQAQMGIFANID 926

Query: 658  DERWKQ----PQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFV 713
            DE +        R++ L S  + + E               E +D   +EK+   + +  
Sbjct: 927  DEPFNPDYTVADRILDLASQVESSGE---------------ENVDVGVIEKFLQYSTMPP 971

Query: 714  QFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALF-PHQLEALNWLRKCWH 772
            + E Q +++       P               ++    KG  L  P+QLE LNWL   W+
Sbjct: 972  EEELQYIRRPPPNRFKP--------------IKESSHYKGDNLLRPYQLEGLNWLLFNWY 1017

Query: 773  KSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLN 832
              +N ILADEMGLGKTV + A I  +  +   + P LV+ PLST+ NW  EF  W+ NLN
Sbjct: 1018 TRQNCILADEMGLGKTVQSIALILEI-IDAGIRGPFLVIAPLSTISNWQREFETWS-NLN 1075

Query: 833  VVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEV 892
            V+ YHG A +R +I++YE +  D         +YKFNV++TTYE++L+D+S L+ + W  
Sbjct: 1076 VIIYHGSAYSRRMIQEYELYFRDQSG-KIIIDAYKFNVIVTTYEVLLSDNSELKNILWRA 1134

Query: 893  LVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSS 952
            +++DE HRLKN   K+   L     +HRVLLTGTPLQN++ E+++LLNFL+P+ FPSL  
Sbjct: 1135 VIIDEAHRLKNKNCKMLEGLRELHMEHRVLLTGTPLQNSVDELFSLLNFLEPSQFPSLQL 1194

Query: 953  FEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAM 1012
            F ++F DL T ++VEEL+ ++ P MLRRLK+D  +++ PK E ++ +EL++IQ +YYRA+
Sbjct: 1195 FLQQFGDLKTEEQVEELQTVLKPMMLRRLKEDVEKSLAPKEETIIEIELTAIQKQYYRAI 1254

Query: 1013 LTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE---PDSGSVEF----LHEM 1065
            L +N+  L      V   ++LN +M+LRK CNHP+LI G E    +   V F    + E 
Sbjct: 1255 LERNFTFLTKGSNTVP--NLLNTMMELRKCCNHPFLIAGAELKIVEDFQVHFPNRHISES 1312

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             I+AS KL L+  +L  L ++GH+VLIFSQM K LDILEDYL ++     YER+DG V  
Sbjct: 1313 LIQASGKLVLVDKLLPKLREKGHKVLIFSQMVKCLDILEDYLRMKG--YMYERIDGQVRG 1370

Query: 1126 GDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQAAI RF++ +  RFVFLL TR+ GLGINL  ADTVIIYDSD+NP  DIQA  R HR
Sbjct: 1371 TLRQAAIDRFSKPEYDRFVFLLCTRAGGLGINLTAADTVIIYDSDWNPQNDIQAQARCHR 1430

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQK--------EVEDILRW 1236
            IGQ+K + VYRL+   S E  +   A  KL LD+  +    +Q+        E+E++L+ 
Sbjct: 1431 IGQNKMVKVYRLITTNSYEREMFDRASLKLGLDKAVLQSMNTQQQASGLSKSEIENLLKR 1490

Query: 1237 GTEELFNDS 1245
            G      DS
Sbjct: 1491 GAYSTIMDS 1499


>gi|312074579|ref|XP_003140033.1| hypothetical protein LOAG_04448 [Loa loa]
          Length = 1841

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 278/692 (40%), Positives = 404/692 (58%), Gaps = 90/692 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKV-----LAK--------RKLENYKAKYGTTVINICD- 658
            ++L+KW+G S++HN+W  E+ LK+     L K        R +E +K       I   D 
Sbjct: 336  QYLIKWLGWSHLHNTWESENSLKLCNAKGLKKIDNYMKRLRDIEEWKLTADKEYIEFFDC 395

Query: 659  ---------ERWKQPQRVISLRSSKDGTR----EAFVKWTGLPYDECTWEKLDEPALEKY 705
                     E++K  +RVI+ + S+        E FVKW GLPY ECTWE+         
Sbjct: 396  EQQMNDELNEQYKVIERVIAHQISRGQGESEGMEYFVKWCGLPYSECTWEE--------- 446

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQP--EELKGGALF------ 757
             HL  +  QF+    K DA  D   R  G        AL ++P  E+L     F      
Sbjct: 447  EHL--IARQFQD---KIDAYYDR--RDNGKIPNKHCPALRKRPKFEKLNNIPNFLQRKDD 499

Query: 758  ------PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVL 811
                   +QLE +NW+   W K  + ILADEMGLGKT+ + +F+S LY +++     LV+
Sbjct: 500  PEHELRDYQLEGVNWMLHAWTKENSCILADEMGLGKTIQSISFLSVLYHKYQLYGTFLVV 559

Query: 812  VPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVL 871
            VPLST+ +W  EF  WAP+LNVV Y G   +R +IRQ+E +        + T   K NV+
Sbjct: 560  VPLSTIASWQREFETWAPDLNVVTYVGDITSRDLIRQFELYV-------QSTKRLKVNVV 612

Query: 872  LTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNN 931
            LTTYE++L D   L    W VL VDE HRLKN  S L+  L  F+  HR+L+TGTPLQN+
Sbjct: 613  LTTYEILLKDKFFLGSFEWTVLTVDEAHRLKNDESLLYRSLFEFTTNHRLLVTGTPLQNS 672

Query: 932  IGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPP 991
            + E++ LL+F+ P  F S   FE + +D +  + +  L + + P +LRR+KKD  +++P 
Sbjct: 673  LKELWALLHFIMPEKFDSWPEFEAEHHD-SDHKTIASLHRKLQPFLLRRVKKDVEKSLPA 731

Query: 992  KTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG 1051
            K E+++ V++++ Q +YY+ +LTKNY+ L    KG +    +N+VM+L+K CNH  L+  
Sbjct: 732  KVEQILRVDMTAQQKQYYKWILTKNYKELSKGVKG-SINGFVNLVMELKKCCNHSSLVRS 790

Query: 1052 T-EPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIE 1110
              +P+ G+   L ++ +K+S KL LL  +L  L + GHRVLIFSQM  +LDI+++YL + 
Sbjct: 791  YDQPEEGADARLQQL-LKSSGKLILLDKLLCRLQETGHRVLIFSQMVMMLDIMQEYLQLR 849

Query: 1111 FGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSD 1169
              P   +R+DGS+    R+AA+  FN   S  F FLLSTR+ GLGINLATADTVII+DSD
Sbjct: 850  RFPS--QRLDGSMRSDLRKAALDHFNAPNSPDFCFLLSTRAGGLGINLATADTVIIFDSD 907

Query: 1170 FNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS--- 1226
            +NP  D+QAM+RAHRIGQ K++ +YRLV +ASVEE I++ AK+KL+LD L + +  +   
Sbjct: 908  WNPQNDLQAMSRAHRIGQKKQVNIYRLVTKASVEEEIVERAKRKLVLDHLIIQRMDTTGR 967

Query: 1227 ----------------QKEVEDILRWGTEELF 1242
                            ++++  IL++G EELF
Sbjct: 968  TVLSKTSATNGTMPFDKQDLAMILKFGAEELF 999


>gi|395505398|ref|XP_003757029.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Sarcophilus
            harrisii]
          Length = 2721

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 277/694 (39%), Positives = 391/694 (56%), Gaps = 58/694 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 319  FYVKYRNFSYLHCKWATMEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 378

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L +  E + 
Sbjct: 379  DRILEVAHTKDSDTGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQILPEIKH 438

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 439  VERPAS---------DSWQK----LEKSREYKNNNQLREYQLEGMNWLLFNWYNRKNCIL 485

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 486  ADEMGLGKTIQSITFLSEIFL-MGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 543

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 544  QISRQMIQQYEMLYRDAQG-NPLSGIFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 602

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 603  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 662

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 663  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 722

Query: 1020 LRNIGKGVAQQSM---LNIVMQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M   +N +M+LRK CNHPYLI G E            PD  S++F  +
Sbjct: 723  L---AKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--SLDFQLQ 777

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 778  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 835

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 836  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 895

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEE 1240
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+
Sbjct: 896  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLTKIEVED 955

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            L     G  G  M E +   +    D++Q  ++R
Sbjct: 956  LLRK--GAYGALMDEEDEGSKFCEEDIDQILQRR 987


>gi|212542839|ref|XP_002151574.1| chromodomain helicase (Chd1), putative [Talaromyces marneffei ATCC
            18224]
 gi|210066481|gb|EEA20574.1| chromodomain helicase (Chd1), putative [Talaromyces marneffei ATCC
            18224]
          Length = 1497

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 273/652 (41%), Positives = 384/652 (58%), Gaps = 60/652 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV-LAKRKLENY---KAKYGTTVINICD------ERW-- 661
            + +KW  +S+ H +W     LK     R+LENY   K K    + N  D      E+W  
Sbjct: 286  YYIKWQNQSHYHATWESSDSLKYHTGFRRLENYFKNKVKTDLYLNNDPDVAPEEKEKWNL 345

Query: 662  ------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK---LDEPALEKYS 706
                        K+  R+I  R + DGT E FVKW  L YD CTWE    + E A+++  
Sbjct: 346  DRERDIESLEDYKKVDRIIGHRDTLDGT-EYFVKWKRLNYDACTWESDSLVKEIAIDEL- 403

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNW 766
               D F+    + +  D  E + PR +     S  V +T  P  L+ G L   Q++ LN+
Sbjct: 404  ---DQFLDRNDKVVSCDKREMQ-PRTR-----SPHVPITGSPSFLQNGQLKDFQVKGLNF 454

Query: 767  LRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFAL 826
            L   W +++NV+LADEMGLGKTV   AFI+ L        P +V+VPLST+P+W   F  
Sbjct: 455  LAYNWSRNQNVVLADEMGLGKTVQTIAFINWLRHVRGQDGPFIVVVPLSTIPSWSETFEY 514

Query: 827  WAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLR 886
            W P++N + Y G ++AR I++ YE      D   +K    KFNV+LTT+E    D   LR
Sbjct: 515  WTPDVNYIVYTGSSQARQILKDYELMK---DGNPRKP---KFNVMLTTFEYANMDFDFLR 568

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
              PW+ + VDE HRLKN  S L+  L  F    R+L+TGTP+QNN+ E+  L++FL P  
Sbjct: 569  QFPWQFMAVDEAHRLKNRESNLYGNLLDFKAPARLLITGTPIQNNLAELSALMDFLNPG- 627

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKL---VAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
               L   E    DL++ Q  E+L KL   + P MLRR K     ++PPKTE+++ VELS 
Sbjct: 628  ---LVEVEVDM-DLSSEQASEKLAKLQNTLKPLMLRRTKSKVETDLPPKTEKIIRVELSD 683

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSV-- 1059
            IQ EYY+ +LTKNY  L N G    +QS+LNI+M+L+K  NHP++ P  E     G+   
Sbjct: 684  IQLEYYKNILTKNYAAL-NEGANGQKQSLLNIMMELKKASNHPFMFPNAEAKLLEGNTRR 742

Query: 1060 EFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
            E L  + I +S K+ LL  +L  L ++GHRVLIFSQM K+LD+L DY+   F    Y+R+
Sbjct: 743  EDLLRIMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGDYM--RFRGYQYQRL 800

Query: 1120 DGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DG++S  +R+ A+  FN  + S F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QA
Sbjct: 801  DGTISAANRRVAMEHFNAPESSDFAFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQA 860

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEV 1230
            M RAHRIGQ++ + VYRLV + ++EE +L+ A+ KLML+ + + +  ++K+V
Sbjct: 861  MARAHRIGQTRPVSVYRLVSKDTIEEEVLERARNKLMLEFITIQRGLTEKDV 912


>gi|154280933|ref|XP_001541279.1| hypothetical protein HCAG_03376 [Ajellomyces capsulatus NAm1]
 gi|150411458|gb|EDN06846.1| hypothetical protein HCAG_03376 [Ajellomyces capsulatus NAm1]
          Length = 1552

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 265/669 (39%), Positives = 384/669 (57%), Gaps = 84/669 (12%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVINIC---------DERW 661
            +EF +KW GKS+ H +W   ES     + R+L+NY  K  +  I             E+W
Sbjct: 315  FEFYIKWQGKSHYHATWETVESLASCRSVRRLDNYVRKTLSLEIQYARDPEIIPEEKEKW 374

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                          K+ +RVI  R   DG  E +VKW  L YD CTWE    PA      
Sbjct: 375  NLDRERDVDAIEDYKKAERVIGSREI-DGATEYYVKWKRLFYDCCTWE----PA------ 423

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQ--------------PEELKG 753
                        L  + ++ E+ R    C    I +  E               P  ++ 
Sbjct: 424  -----------PLVSEIAQREIDRYLDRCSHPPISSKAESSPSTRAPFEPIHGTPSFVQN 472

Query: 754  GALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVP 813
            G L   Q++ +N++   W + +NV+LADEMGLGKTV   AFI+ L      + P +V+VP
Sbjct: 473  GELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRHQQGPFIVVVP 532

Query: 814  LSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLT 873
            LSTMP+W   F  W P+LN V Y+G   +R II++YE        ++      KF+VLLT
Sbjct: 533  LSTMPSWAETFDNWTPDLNYVVYNGNETSRNIIKEYELL------IDGNIKRPKFHVLLT 586

Query: 874  TYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIG 933
            TYE +L D++ L  + W+ + VDE HRLKN  S+L++ L  F    R+L+TGTP+QNN+G
Sbjct: 587  TYEYVLVDAAFLSQIKWQFMAVDEAHRLKNRESQLYAKLVEFKSPSRLLITGTPVQNNLG 646

Query: 934  EMYNLLNFLQPASFPSLSSFEEKFNDL---TTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
            E+  L++FL P     L   ++   DL     + K+ EL K + P+MLRR K     ++P
Sbjct: 647  ELSALMDFLNPG----LIQIDDDM-DLGCEAASVKLAELTKSIQPYMLRRTKSKVESDLP 701

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 1050
            PK+E+++ VELS IQ EYY+ +LTKNY  L   GKG  +QS+LNI+M+L+K  NHP++ P
Sbjct: 702  PKSEKIIRVELSDIQLEYYKNILTKNYAALNQGGKG-QKQSLLNIMMELKKASNHPFMFP 760

Query: 1051 GTEP-----DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILED 1105
              E       +G  E +  + I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL D
Sbjct: 761  NAESRILEGKTGREEMMRAL-ITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILAD 819

Query: 1106 YLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVI 1164
            Y+++      Y+R+DG+++ G R+ +I  FN  + S F FLLSTR+ GLGINL TADTV+
Sbjct: 820  YMDVR--GYAYQRLDGTIAAGPRRLSIEHFNAPESSDFAFLLSTRAGGLGINLMTADTVV 877

Query: 1165 IYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKS 1224
            ++DSD+NP AD+QAM RAHRIGQ++ + VYRLV + +VEE +L+ A+ KL+L+ + + + 
Sbjct: 878  LFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRG 937

Query: 1225 GSQKEVEDI 1233
             + KE  ++
Sbjct: 938  VTDKEATEL 946


>gi|395332947|gb|EJF65325.1| hypothetical protein DICSQDRAFT_79369 [Dichomitus squalens LYAD-421
            SS1]
          Length = 1441

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 274/693 (39%), Positives = 392/693 (56%), Gaps = 80/693 (11%)

Query: 612  YEFLVKWVGKSNIHN---------------SWIPESQLKVLAKRKLENYKAKYGTTVINI 656
            YEFL ++ G   + N               +  PE +  +L +R+ +  + +   TV   
Sbjct: 241  YEFLKRFKGLKRVDNYIKAFKMDQEILAARNLSPEERETILLRRERDKEELELHKTV--- 297

Query: 657  CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDE--PALEKYSHLTDLFVQ 714
                    +RVI+ R ++ G  E F KW GL YD CTWE  D+  P  ++     D F Q
Sbjct: 298  --------ERVIAQRENETGQVEYFCKWNGLNYDHCTWEVQDDIRPIAKEQ---IDAFRQ 346

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK--GGALFPHQLEALNWLRKCWH 772
             E +  K        PR      +     + E P  L   GG L   QL  LNWL   W 
Sbjct: 347  REAEA-KFPFKSAVYPR----YSRPPFEKIKEDPSYLTDTGGELKDFQLTGLNWLAYLWS 401

Query: 773  KSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLN 832
            K +N ILADEMGLGKTV + +F+S L+ E +   P LV+VPLST+  W ++FA WAP+L+
Sbjct: 402  KGENGILADEMGLGKTVQSVSFLSYLFHERRQYGPFLVIVPLSTITAWQSQFATWAPDLH 461

Query: 833  VVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEV 892
            VV Y G A ARA+ R+YE+  S        +   K NVLLTTYE+ L D   L  + W++
Sbjct: 462  VVTYIGSAAARAVARKYEFGPS--------SKKLKMNVLLTTYEITLRDVKELGEIKWQM 513

Query: 893  LVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSS 952
            L+VDE HRLKNS S+L+  L  FS   +VL+TGTPLQNN+ E+ +L++FL P  F   + 
Sbjct: 514  LMVDEAHRLKNSESQLYEALRGFSAASKVLITGTPLQNNVKELLSLMHFLMPEKFLLTNE 573

Query: 953  FEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAM 1012
            F+    D     K++EL K +   MLRRLK+D + ++P K+ER++ VE+S++Q  +Y+ +
Sbjct: 574  FD--LTDADHEVKIKELHKQLESLMLRRLKRDVLTSLPTKSERILRVEMSAMQTHFYKNI 631

Query: 1013 LTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAK 1072
            LTKN+Q L     G    S+LNI M+L+K  NHP+L  G E  S + E + +  + +S K
Sbjct: 632  LTKNFQALVKSANGNNNISLLNIAMELKKAANHPFLFEGAETRSNNDEEVLKGLVMSSGK 691

Query: 1073 LTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAI 1132
            + LL  +L  L  + HRVLIFSQM ++LDI+ DY+ +      ++R+DG+V+   R+ +I
Sbjct: 692  MVLLDKLLHRLRADNHRVLIFSQMVRMLDIMSDYMTLR--GYQHQRLDGTVASEQRKKSI 749

Query: 1133 TRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRL 1191
              FN   S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM RAHRIGQ   +
Sbjct: 750  QHFNAPGSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHV 809

Query: 1192 LVYRLVVRASVEERILQLAKKKLMLDQLFVN-----------KSGSQK-----------E 1229
             VYR V + ++EE IL+ AKKK++L+   +N           K G  K           E
Sbjct: 810  SVYRFVSKDTMEEDILERAKKKMVLEYAIINQMDTSQAHLSSKGGGSKDPSKADTLSKDE 869

Query: 1230 VEDILRWGTEELFNDSPGINGKDMGENNTSIEE 1262
            +  +L++G +++F+       KD  + N  ++E
Sbjct: 870  LHAVLKYGAQKIFD-------KDDSQQNKKLDE 895


>gi|62319947|dbj|BAD94038.1| pseudogene [Arabidopsis thaliana]
          Length = 1221

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 282/686 (41%), Positives = 402/686 (58%), Gaps = 79/686 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK-RKLENYKAK------YGTTV----INICD--- 658
            EFL+KW G+S++H  W   S L+ L+  +K+ NY  K      Y T +    I + D   
Sbjct: 463  EFLIKWKGQSHLHCQWKTLSDLQNLSGFKKVLNYTKKVTEEIRYRTALSREEIEVNDVSK 522

Query: 659  -------ERWKQPQRVISLRSSKDG----TREAFVKWTGLPYDECTWEK-----LDEPAL 702
                   ++  Q +R+I+ R SKDG      E  VKW GL Y E TWEK       + A+
Sbjct: 523  EMDLDIIKQNSQVERIIADRISKDGLGDVVPEYLVKWQGLSYAEATWEKDVDIAFAQVAI 582

Query: 703  EKY-SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQL 761
            ++Y +    + VQ +         E +  +GK   ++     L EQPE L GG L  +QL
Sbjct: 583  DEYKAREVSIAVQGK-------MVEQQRTKGKASLRK-----LDEQPEWLIGGTLRDYQL 630

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
            E LN+L   W    NVILADEMGLGKTV + + +  L    +   P LV+VPLST+ NW 
Sbjct: 631  EGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPLSTLANWA 690

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
             EF  W P +N++ Y G   +R + +QYE++     N  K     KFN LLTTYE++L D
Sbjct: 691  KEFRKWLPGMNIIVYVGTRASREVCQQYEFY-----NEKKVGRPIKFNALLTTYEVVLKD 745

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
             + L  + W  L+VDE HRLKNS ++L++ L  FS ++++L+TGTPLQN++ E++ LL+F
Sbjct: 746  KAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLHF 805

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKTERMVPV 999
            L P  F +   F E + +L +  + E   L   + PH+LRR+ KD  +++PPK ER++ V
Sbjct: 806  LDPGKFKNKDEFVENYKNLNSFNESELANLHLELRPHILRRVIKDVEKSLPPKIERILRV 865

Query: 1000 ELSSIQAEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHPYLIP----GTE 1053
            E+S +Q +YY+ +L +N+    ++ KGV   Q S+LNIV++L+K CNHP+L      G  
Sbjct: 866  EMSPLQKQYYKWILERNFH---DLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYG 922

Query: 1054 PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
             D      L ++ I +S KL +L  +L  L +  HRVLIFSQM ++LDIL +YL++    
Sbjct: 923  GDINDNSKLDKI-ILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLR--G 979

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              ++R+DGS     RQ A+  FN   S  F FLLSTR+ GLGINLATADTV+I+DSD+NP
Sbjct: 980  FQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNP 1039

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN---------- 1222
              D+QAM+RAHRIGQ + + +YR V   SVEE IL+ AK+K++LD L +           
Sbjct: 1040 QNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGRLEK 1099

Query: 1223 ---KSGS---QKEVEDILRWGTEELF 1242
               K GS   + E+  ILR+G EELF
Sbjct: 1100 RETKKGSNFDKNELSAILRFGAEELF 1125


>gi|390355907|ref|XP_003728652.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 2
            [Strongylocentrotus purpuratus]
 gi|390355909|ref|XP_781410.3| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 3
            [Strongylocentrotus purpuratus]
          Length = 1835

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 279/700 (39%), Positives = 408/700 (58%), Gaps = 98/700 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENY----------------------KA 647
            ++L+KW   ++IHN+W  E+ L   KV   +KLEN+                      + 
Sbjct: 376  QYLIKWKSWAHIHNTWESEAGLRTQKVRGMKKLENFIQREDEIEQWKRIASPEDIEYFEC 435

Query: 648  KYGTTV--INICDERWKQPQRVISLRSSKD------GTREAFVKWTGLPYDECTWEKLDE 699
            +Y  T+   + C    ++ +RVI+  + K       G  + FVKW GLPY +CTWE   E
Sbjct: 436  QYEMTMQLFDQC----QRVERVIAHTNQKQPGDYQSGYPDYFVKWQGLPYADCTWED-GE 490

Query: 700  PALEKYSH-LTDLFVQFERQTLKKDASE--DELPRGKGDCQQSEIVALTEQP-----EEL 751
                 + H + D  ++ + Q +   +++     PR           AL +QP     +EL
Sbjct: 491  LISRDFQHCIEDYTIRSKSQKIPARSAKVLKSRPR---------FAALKKQPTYIGTDEL 541

Query: 752  KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVL 811
            +   L  +QL+ LNWL   W K  +VILADEMGLGKT+   +F+S L+   +   P L++
Sbjct: 542  E---LRDYQLDGLNWLAHSWCKRNSVILADEMGLGKTIQVISFLSYLFNVHQLYGPFLIV 598

Query: 812  VPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEW--HASDPDNLNKKTSSYKFN 869
            VPLSTM +W  EF  W   +NVV Y G   +R  IR+YEW  H     N NK     K N
Sbjct: 599  VPLSTMTSWQREFEAWDSKMNVVVYIGDINSRNSIREYEWCVHG----NRNK----LKLN 650

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             +LTTYE++L D + L  VPW VLVVDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 651  AILTTYEILLKDKAFLGAVPWAVLVVDEAHRLKNDDSLLYKSLKEFETNHRLLITGTPLQ 710

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  FP+   FEE+F+          L + + P +LRR+KKD  +++
Sbjct: 711  NSLKELWSLLHFIMPERFPTWEIFEEEFSQ-ADKNGYASLHQELEPFLLRRVKKDVEKSL 769

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K ER++ VE+SS+Q +YY+ +LT+N++ L    KG    S +NI+M+L+K CNH  LI
Sbjct: 770  PAKVERILRVEMSSLQKQYYKFILTRNFKALCKGLKGNT-SSFINIMMELKKCCNHSLLI 828

Query: 1050 PGTEPDSG-SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
               E +S   ++++    I+ S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL 
Sbjct: 829  RPPEDESDPDLKYI----IRGSGKLVLLDKLLTRLQERGHRVLIFSQMVRMLDILSEYL- 883

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYD 1167
             ++    ++R+DGS+    R+ A+  FN + S+ F FLLSTR+ GLG+NLA+ADTVII+D
Sbjct: 884  -QYRHFQHQRLDGSIRGEIRKQALDHFNAEGSQDFCFLLSTRAGGLGLNLASADTVIIFD 942

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------ 1221
            SD+NP  DIQAM RAHRIGQ +++ +YRLV + ++EE I++ AK+K++LD L +      
Sbjct: 943  SDWNPQNDIQAMARAHRIGQRRQVNIYRLVTKDTIEEEIIERAKRKMVLDHLVIQRMDTT 1002

Query: 1222 -----NKSGSQ---------KEVEDILRWGTEELFNDSPG 1247
                 +KS SQ         +E+  IL++  EELF +  G
Sbjct: 1003 GRTVLSKSSSQASRDAPFSKEELTAILKFRAEELFKEPDG 1042


>gi|301785221|ref|XP_002928025.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like, partial
            [Ailuropoda melanoleuca]
          Length = 1114

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 284/718 (39%), Positives = 405/718 (56%), Gaps = 101/718 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 306  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 365

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 366  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 425

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+    D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 426  SWE--DEALIGKKFQSCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 477

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W KS +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 478  GGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 537

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +N             IR+YEW       ++ +T   KFN
Sbjct: 538  IVVPLSTLTSWQREFEIWAPEIN-------------IREYEW-------IHSQTKRLKFN 577

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 578  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGTPLQ 637

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 638  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 696

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 697  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 755

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 756  KPPEENERENGQEVLLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 814

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 815  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 872

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 873  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 932

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 933  TGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 987


>gi|297835980|ref|XP_002885872.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297331712|gb|EFH62131.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1721

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 284/691 (41%), Positives = 403/691 (58%), Gaps = 85/691 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK-RKLENYKAK------YGTTV----INICD--- 658
            EFL+KW G+S++H  W   S L+ L+  +K+ NY  K      Y T +    I + D   
Sbjct: 460  EFLIKWKGQSHLHCQWKTLSDLQNLSGFKKVLNYTKKVTEEIRYRTALSREEIEVNDVSK 519

Query: 659  -------ERWKQPQRVISLRSSKDG----TREAFVKWTGLPYDECTWEK-----LDEPAL 702
                   ++  Q +R+I+ R SKDG      E  VKW GL Y E TWEK       + A+
Sbjct: 520  EMDLDIIKQNSQVERIIADRISKDGLGDVVPEYLVKWQGLSYAEATWEKDVDITFAQVAI 579

Query: 703  EKY-SHLTDLFVQ---FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFP 758
            ++Y +    + VQ    E+Q  K  AS               +  L EQPE L GG L  
Sbjct: 580  DEYKAREVSIAVQGKMVEQQRTKGKAS---------------LRKLDEQPEWLSGGTLRD 624

Query: 759  HQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
            +QLE LN+L   W    NVILADEMGLGKTV + + +  L    +   P LV+VPLST+ 
Sbjct: 625  YQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPLSTLA 684

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
            NW  EF  W P +N++ Y G   +R + +QYE++     N  K     KFN LLTTYE++
Sbjct: 685  NWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFY-----NEKKVGRPIKFNALLTTYEVV 739

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            L D + L  + W  L+VDE HRLKNS ++L++ L  FS ++++L+TGTPLQN++ E++ L
Sbjct: 740  LKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWAL 799

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKTERM 996
            L+FL P  F +   F E + +L++  + E   L   + PH+LRR+ KD  +++PPK ER+
Sbjct: 800  LHFLDPGKFKNKDEFVENYKNLSSFNESELANLHLELRPHILRRVIKDVEKSLPPKIERI 859

Query: 997  VPVELSSIQAEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHPYLIP---- 1050
            + VE+S +Q +YY+ +L +N+    ++ KGV   Q S+LNIV++L+K CNHP+L      
Sbjct: 860  LRVEMSPLQKQYYKWILERNFH---DLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADH 916

Query: 1051 GTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIE 1110
            G   D      L ++ I +S KL +L  +L  L +  HRVLIFSQM ++LDIL +YL++ 
Sbjct: 917  GYGGDINDNSKLDKI-ILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLR 975

Query: 1111 FGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSD 1169
                 ++R+DGS     RQ A+  FN   S  F FLLSTR+ GLGINLATADTV+I+DSD
Sbjct: 976  --GFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSD 1033

Query: 1170 FNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN------- 1222
            +NP  D+QAM+RAHRIGQ + + +YR V   SVEE IL+ AK+K++LD L +        
Sbjct: 1034 WNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGR 1093

Query: 1223 ------KSGS---QKEVEDILRWGTEELFND 1244
                  K GS   + E+  ILR+G EELF +
Sbjct: 1094 LEKRETKKGSNFDKNELSAILRFGAEELFKE 1124


>gi|327271626|ref|XP_003220588.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like [Anolis
            carolinensis]
          Length = 2660

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 268/630 (42%), Positives = 366/630 (58%), Gaps = 53/630 (8%)

Query: 668  ISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASED 727
            I+LR  ++ T    VKW  LPY+E TWE  ++    K      L +  E ++L++ ASE 
Sbjct: 365  INLRGHREVTH-YLVKWCSLPYEESTWELEEDVDPGKIKEFEALQILPEIKSLERPASES 423

Query: 728  ----ELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEM 783
                E  RG  +  Q                 L  +QLE +NWL   W+  KN ILADEM
Sbjct: 424  WQKLEKSRGYKNNNQ-----------------LREYQLEGMNWLLFNWYNMKNCILADEM 466

Query: 784  GLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKAR 843
            GLGKT+ +  F+  +Y     + P L++ PLST+ NW  EF  W   +N + YHG   +R
Sbjct: 467  GLGKTIQSITFLFEIYL-MGLRGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISR 524

Query: 844  AIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKN 903
             +I QYE    D    N     +KF+V++TT+EMILAD   L+ + W  +++DE HRLKN
Sbjct: 525  QMIHQYEMVYRDAQG-NPLPGVFKFHVVITTFEMILADCPELKKIQWRCVIIDEAHRLKN 583

Query: 904  SGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTT 963
               KL   L     +H+VLLTGTPLQN++ E+++LLNFL+P  FPS ++F E+F DL T 
Sbjct: 584  RNCKLLEGLKLMCLEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTE 643

Query: 964  QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNI 1023
            ++V++L+ L+ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  L   
Sbjct: 644  EQVKKLQSLLKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL--- 700

Query: 1024 GKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHEMRIK 1068
             KG  Q +M N++   M+LRK CNHPYLI G E            PD  +++F  +  I+
Sbjct: 701  SKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--ALDFQLQAMIQ 758

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V    R
Sbjct: 759  AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVRGNLR 816

Query: 1129 QAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            QAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ
Sbjct: 817  QAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ 876

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEELFND 1244
            SK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+L   
Sbjct: 877  SKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRK 936

Query: 1245 SPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
              G  G  M E +   +    D++Q  ++R
Sbjct: 937  --GAYGALMDEEDEGSKFCEEDIDQILQRR 964


>gi|223462579|gb|AAI50807.1| Chromodomain helicase DNA binding protein 6 [Mus musculus]
          Length = 2711

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 276/692 (39%), Positives = 389/692 (56%), Gaps = 54/692 (7%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 317  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYIEI 376

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L +  E + 
Sbjct: 377  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQILPEVKH 436

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L    E      L  +QLE +NWL   W+  KN IL
Sbjct: 437  VERPAS---------DAWQK----LETSREYRNSNRLREYQLEGMNWLLFNWYNRKNCIL 483

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ + AF+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 484  ADEMGLGKTIQSIAFLSEIFVR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 541

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 542  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 600

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 601  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 660

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 661  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 720

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMR 1066
            L    KG  Q +M N++   M+LRK CNHPYLI G E            S + +F  +  
Sbjct: 721  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAM 777

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVG 1126
            I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V   
Sbjct: 778  IQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVRGN 835

Query: 1127 DRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1185
             RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRI
Sbjct: 836  LRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 895

Query: 1186 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEELF 1242
            GQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+L 
Sbjct: 896  GQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLL 955

Query: 1243 NDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
                G  G  M E +   +    D++Q  ++R
Sbjct: 956  RK--GAYGALMDEEDEGSKFCEEDIDQILQRR 985


>gi|61742812|ref|NP_775544.2| chromodomain helicase DNA binding protein 6 [Mus musculus]
          Length = 2711

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 276/692 (39%), Positives = 389/692 (56%), Gaps = 54/692 (7%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 317  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYIEI 376

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L +  E + 
Sbjct: 377  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQILPEVKH 436

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L    E      L  +QLE +NWL   W+  KN IL
Sbjct: 437  VERPAS---------DAWQK----LETSREYRNSNRLREYQLEGMNWLLFNWYNRKNCIL 483

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ + AF+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 484  ADEMGLGKTIQSIAFLSEIFVR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 541

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 542  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 600

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 601  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 660

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 661  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 720

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMR 1066
            L    KG  Q +M N++   M+LRK CNHPYLI G E            S + +F  +  
Sbjct: 721  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAM 777

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVG 1126
            I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V   
Sbjct: 778  IQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVRGN 835

Query: 1127 DRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1185
             RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRI
Sbjct: 836  LRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 895

Query: 1186 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEELF 1242
            GQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+L 
Sbjct: 896  GQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLL 955

Query: 1243 NDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
                G  G  M E +   +    D++Q  ++R
Sbjct: 956  RK--GAYGALMDEEDEGSKFCEEDIDQILQRR 985


>gi|148674355|gb|EDL06302.1| chromodomain helicase DNA binding protein 6 [Mus musculus]
          Length = 2695

 Score =  461 bits (1187), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 276/692 (39%), Positives = 389/692 (56%), Gaps = 54/692 (7%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 314  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYIEI 373

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L +  E + 
Sbjct: 374  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQILPEVKH 433

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L    E      L  +QLE +NWL   W+  KN IL
Sbjct: 434  VERPAS---------DAWQK----LETSREYRNSNRLREYQLEGMNWLLFNWYNRKNCIL 480

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ + AF+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 481  ADEMGLGKTIQSIAFLSEIFVR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 538

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 539  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 597

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 598  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 657

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 658  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 717

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMR 1066
            L    KG  Q +M N++   M+LRK CNHPYLI G E            S + +F  +  
Sbjct: 718  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAM 774

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVG 1126
            I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V   
Sbjct: 775  IQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVRGN 832

Query: 1127 DRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1185
             RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRI
Sbjct: 833  LRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 892

Query: 1186 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEELF 1242
            GQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+L 
Sbjct: 893  GQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLL 952

Query: 1243 NDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
                G  G  M E +   +    D++Q  ++R
Sbjct: 953  RK--GAYGALMDEEDEGSKFCEEDIDQILQRR 982


>gi|392340312|ref|XP_003754036.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Rattus
            norvegicus]
          Length = 2994

 Score =  461 bits (1187), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 272/670 (40%), Positives = 385/670 (57%), Gaps = 63/670 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTTVI------NICDERWKQPQ 665
            F VK+   S +H  W     L+     ++K++ +K+K G +        ++ +  + +  
Sbjct: 815  FYVKYKNFSYLHCQWASVEDLEKDKRIQQKIKRFKSKQGQSKFLSEIEDDLFNPDYVEVD 874

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    LD+  +E++  L     + ER 
Sbjct: 875  RIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDLDQAKIEEFEKLMSREPETER- 933

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             +++  ++D         ++SE        E      L  +QLE +NWL   W+  +N I
Sbjct: 934  -VERPPADD--------WKKSESSR-----EYKNNNKLREYQLEGVNWLLFNWYNMRNCI 979

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YHG
Sbjct: 980  LADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHG 1037

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE 
Sbjct: 1038 SQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEA 1096

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS ++F ++F 
Sbjct: 1097 HRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFG 1156

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 1157 DLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFT 1216

Query: 1019 ILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIK 1068
             L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F  +  I+
Sbjct: 1217 FLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKDAHNADSPDFQLQAMIQ 1276

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDIL---EDYLNIE----FGPKTYERVDG 1121
            A+ KL L+  +L  L   GHRVLIFSQM + LDIL   E  L +          YER+DG
Sbjct: 1277 AAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILLLAEIILFVRPPCCISRYPYERIDG 1336

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  
Sbjct: 1337 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1396

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQK 1228
            R HRIGQSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+K
Sbjct: 1397 RCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKK 1456

Query: 1229 EVEDILRWGT 1238
            E+ED+LR G 
Sbjct: 1457 EIEDLLRKGA 1466


>gi|291001481|ref|XP_002683307.1| chromodomain helicase DNA binding protein [Naegleria gruberi]
 gi|284096936|gb|EFC50563.1| chromodomain helicase DNA binding protein [Naegleria gruberi]
          Length = 1800

 Score =  461 bits (1187), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/626 (40%), Positives = 383/626 (61%), Gaps = 38/626 (6%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK--VLAKRKLENYKAKYGTTVINICDE----RWKQPQR 666
            E+L K+  KS +H  WIP  +L   +  + K+  +  +Y        +E     + + +R
Sbjct: 216  EYLCKYKNKSYLHCEWIPRYELDDDIQTRNKINRFNKQYDVKYFEGLEEYFNPEFTEVER 275

Query: 667  VISLRSSKDGTREAFVKWTGLPYDECTWE---KL-DEPALEKYSHLTDLFVQFERQTLKK 722
            +I  R   D +    VKW GL Y E TWE   K+ D+  +E+Y  +  L    +R+   +
Sbjct: 276  IID-RGVWDDSEVYCVKWKGLTYSESTWEFENKIEDKEKIEQYKRINKLPTPEDRRIPAR 334

Query: 723  DASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADE 782
             A               +   L E P    G  L  +QLE LNWL  CW++ +N ILADE
Sbjct: 335  PAPH-------------KFKKLEESPSFRDGNQLREYQLEGLNWLVFCWYQRRNSILADE 381

Query: 783  MGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKA 842
            MGLGKTV   A +  L      + P +V+ PLST+ +W  EF  W  ++NV+ +HG  ++
Sbjct: 382  MGLGKTVQTVATLEYLRAFEHIRGPFIVIAPLSTVEHWKREFENWT-DMNVLVFHGNTQS 440

Query: 843  RAIIRQYEWHASDPD--NLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            R +++ +E+    P   NL     +YKFNVL+TTYE+++A+SS+L  +PW+ LVVDEGHR
Sbjct: 441  REVMKNHEFFFKHPKTGNLIYHQKTYKFNVLITTYEIVMAESSYLSKIPWQYLVVDEGHR 500

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN  SKL  +L +F+  H++LLTGTP+QNN+ E+++LL FL P +F  L  F E++ +L
Sbjct: 501  LKNHNSKLAQILKNFNAVHKLLLTGTPIQNNLTELFSLLQFLDPETFYDLDVFSEEYGNL 560

Query: 961  --TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
              + ++K+E L KL++P++LRRLK+D  ++IPPK E +V V  +SIQ  Y +A+  +N +
Sbjct: 561  GESGSEKLEGLHKLISPYILRRLKEDVEKSIPPKEEIVVEVVPTSIQKAYEQAIFKRNRE 620

Query: 1019 IL-RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD----SGSVEFLHEMRIKASAKL 1073
             L + + K      + N++M+LRKVCNHP+LI G E +       VE ++E  IK+S+K+
Sbjct: 621  FLMKGVSKSQNVPKLNNVLMELRKVCNHPFLISGAEENITRGMSDVE-VNEALIKSSSKM 679

Query: 1074 TLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAIT 1133
             L+  +L+ L + GH+VLIFSQM  +L+ILEDY+   +   TY R+DG++    RQ AI 
Sbjct: 680  ILVDKLLRKLREGGHKVLIFSQMVLVLNILEDYMR--YRNFTYVRLDGTIKGSIRQQAID 737

Query: 1134 RFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLL 1192
            RFN  +   FVFL+ST++ G+GINL +ADTVIIYDSD+NP  D+QA  R HRIGQ+K + 
Sbjct: 738  RFNDPNIDTFVFLVSTKAGGVGINLTSADTVIIYDSDWNPQNDLQAQARCHRIGQTKEVK 797

Query: 1193 VYRLVVRASVEERILQLAKKKLMLDQ 1218
            +YRL+ + + E+ I + A  KL LD+
Sbjct: 798  IYRLLTKNTKEKEIFERASMKLGLDR 823


>gi|390355905|ref|XP_003728651.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 1
            [Strongylocentrotus purpuratus]
          Length = 1865

 Score =  461 bits (1187), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 279/700 (39%), Positives = 408/700 (58%), Gaps = 98/700 (14%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENY----------------------KA 647
            ++L+KW   ++IHN+W  E+ L   KV   +KLEN+                      + 
Sbjct: 376  QYLIKWKSWAHIHNTWESEAGLRTQKVRGMKKLENFIQREDEIEQWKRIASPEDIEYFEC 435

Query: 648  KYGTTV--INICDERWKQPQRVISLRSSKD------GTREAFVKWTGLPYDECTWEKLDE 699
            +Y  T+   + C    ++ +RVI+  + K       G  + FVKW GLPY +CTWE   E
Sbjct: 436  QYEMTMQLFDQC----QRVERVIAHTNQKQPGDYQSGYPDYFVKWQGLPYADCTWED-GE 490

Query: 700  PALEKYSH-LTDLFVQFERQTLKKDASE--DELPRGKGDCQQSEIVALTEQP-----EEL 751
                 + H + D  ++ + Q +   +++     PR           AL +QP     +EL
Sbjct: 491  LISRDFQHCIEDYTIRSKSQKIPARSAKVLKSRPR---------FAALKKQPTYIGTDEL 541

Query: 752  KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVL 811
            +   L  +QL+ LNWL   W K  +VILADEMGLGKT+   +F+S L+   +   P L++
Sbjct: 542  E---LRDYQLDGLNWLAHSWCKRNSVILADEMGLGKTIQVISFLSYLFNVHQLYGPFLIV 598

Query: 812  VPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEW--HASDPDNLNKKTSSYKFN 869
            VPLSTM +W  EF  W   +NVV Y G   +R  IR+YEW  H     N NK     K N
Sbjct: 599  VPLSTMTSWQREFEAWDSKMNVVVYIGDINSRNSIREYEWCVHG----NRNK----LKLN 650

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             +LTTYE++L D + L  VPW VLVVDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 651  AILTTYEILLKDKAFLGAVPWAVLVVDEAHRLKNDDSLLYKSLKEFETNHRLLITGTPLQ 710

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  FP+   FEE+F+          L + + P +LRR+KKD  +++
Sbjct: 711  NSLKELWSLLHFIMPERFPTWEIFEEEFSQ-ADKNGYASLHQELEPFLLRRVKKDVEKSL 769

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K ER++ VE+SS+Q +YY+ +LT+N++ L    KG    S +NI+M+L+K CNH  LI
Sbjct: 770  PAKVERILRVEMSSLQKQYYKFILTRNFKALCKGLKGNT-SSFINIMMELKKCCNHSLLI 828

Query: 1050 PGTEPDSG-SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
               E +S   ++++    I+ S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL 
Sbjct: 829  RPPEDESDPDLKYI----IRGSGKLVLLDKLLTRLQERGHRVLIFSQMVRMLDILSEYL- 883

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYD 1167
             ++    ++R+DGS+    R+ A+  FN + S+ F FLLSTR+ GLG+NLA+ADTVII+D
Sbjct: 884  -QYRHFQHQRLDGSIRGEIRKQALDHFNAEGSQDFCFLLSTRAGGLGLNLASADTVIIFD 942

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------ 1221
            SD+NP  DIQAM RAHRIGQ +++ +YRLV + ++EE I++ AK+K++LD L +      
Sbjct: 943  SDWNPQNDIQAMARAHRIGQRRQVNIYRLVTKDTIEEEIIERAKRKMVLDHLVIQRMDTT 1002

Query: 1222 -----NKSGSQ---------KEVEDILRWGTEELFNDSPG 1247
                 +KS SQ         +E+  IL++  EELF +  G
Sbjct: 1003 GRTVLSKSSSQASRDAPFSKEELTAILKFRAEELFKEPDG 1042


>gi|384485492|gb|EIE77672.1| hypothetical protein RO3G_02376 [Rhizopus delemar RA 99-880]
          Length = 1497

 Score =  461 bits (1187), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 375/635 (59%), Gaps = 45/635 (7%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENY---------------KAKYGTTVINI 656
            +F +KW   S++HN+W   + LK     R++ENY               K +     INI
Sbjct: 277  DFQIKWKNYSHLHNTWESFAYLKSFKGFRRVENYINRIKDEMAFRRNVSKEEIEQQDINI 336

Query: 657  CDER-----WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDL 711
               R     W   +RV + +       + FVKW  L YDECTWE   +   E Y    D 
Sbjct: 337  SRLREEIKEWSTVERVTAAKGQP--CDQYFVKWKRLHYDECTWEDAADINSE-YQWAIDE 393

Query: 712  FVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCW 771
            F + E Q +K        P+     Q+    A   QPE ++GG L  +QL  +NW+   W
Sbjct: 394  FWERE-QNVKIPHRSTAYPKN----QRPTFHAFKTQPEYIRGGELRDYQLHGVNWMYWLW 448

Query: 772  HKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNL 831
             K++N ILADEMGLGKTV   +F + LY + K   P LV+VPLST  NW+ EF  WAP +
Sbjct: 449  CKNRNGILADEMGLGKTVQTISFFNVLYHKQKLYGPFLVVVPLSTSDNWMNEFKQWAPEM 508

Query: 832  NVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWE 891
            NV+ Y G   +R  IR  E++ S        T+  KFN+L+TTYE++L D   L  + W+
Sbjct: 509  NVICYLGNRASREAIRNTEFYVSG-------TNKIKFNILITTYEIVLKDKDILGSIRWQ 561

Query: 892  VLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLS 951
             L VDE HRLKNS S+L+  L+SFS  +R+L+TGTPLQN+I E+  L+ FL P+   S  
Sbjct: 562  YLAVDEAHRLKNSDSQLYEALSSFSTANRLLITGTPLQNSIKELLALVRFLMPSMDLSQY 621

Query: 952  SFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRA 1011
            SF+    D    +K++ L + +   MLRRLKKD  +++P KTER++ V+LS +Q  YY+ 
Sbjct: 622  SFDLDVEDANQEEKIKALHEQLKSIMLRRLKKDVEKSLPNKTERILRVQLSEMQKSYYKG 681

Query: 1012 MLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMR--IKA 1069
            +LT+N+  L +  +   Q   LNI ++L+K  NHP+L P  E    +++ + +++  ++ 
Sbjct: 682  ILTRNFDFLASSCENKKQ--WLNIAVELKKASNHPFLFPDAE--KHTMDRMEQLKGLVEN 737

Query: 1070 SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQ 1129
            S K+ LL  +L  +  +GHRVLIFSQM  +LDIL DY+ +   P  ++R+DGS    +R 
Sbjct: 738  SGKMVLLDKLLTRMKTDGHRVLIFSQMVMMLDILSDYMTLRGHP--FQRLDGSTKPEERN 795

Query: 1130 AAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 1188
             AI  FN  D   FVFLLSTR+ G+GINL TADTVII+DSD+NP  D+QAM+RAHRIGQ+
Sbjct: 796  KAIEHFNAPDSPDFVFLLSTRAGGMGINLVTADTVIIFDSDWNPQNDLQAMSRAHRIGQT 855

Query: 1189 KRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK 1223
            K + VYR V + ++EE I++ AK+K++L+   + +
Sbjct: 856  KSVNVYRFVSKGTMEEDIIERAKRKMVLEYCIIKQ 890


>gi|449486107|ref|XP_002195547.2| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like
            [Taeniopygia guttata]
          Length = 2887

 Score =  461 bits (1187), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 299/810 (36%), Positives = 431/810 (53%), Gaps = 87/810 (10%)

Query: 519  DKDSDPVAVNGKVQDESAVSTEDLGERNDKMVV-----EDADVSLRDNEGLTVSEIHITC 573
            D D D  + + +  +ESA S +    R+ + V      ED D  + D++G T++ +    
Sbjct: 409  DLDQDLPSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGR 468

Query: 574  ESTDKDVDVGKKTSGSVAKRVQEPA---------------VTESAQVKGKAV-SYEFLVK 617
             S          ++ ++A + +EP                V + A   G A  + EF VK
Sbjct: 469  TSA--------LSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGLAFETEEFYVK 520

Query: 618  WVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ-----RVI 668
            +   S +H  W    +L+   +  +K++ ++ K      +    DE    P      R++
Sbjct: 521  YRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRIL 580

Query: 669  SLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKD 723
             +  +KD           VKW  LPY+E TWE  ++    K      L +  E + +++ 
Sbjct: 581  EVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHMERP 640

Query: 724  ASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEM 783
            ASE                 L +  E      L  +QLE +NWL   W+  KN ILADEM
Sbjct: 641  ASES-------------WQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEM 687

Query: 784  GLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKAR 843
            GLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG   +R
Sbjct: 688  GLGKTIQSITFLSEIFL-MGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISR 745

Query: 844  AIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKN 903
             +I+QYE    D    N     +KF V++TT+EMILAD   L+ + W  +V+DE HRLKN
Sbjct: 746  QMIQQYEMVYRDTQG-NPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKN 804

Query: 904  SGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTT 963
               KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P  FPS ++F E+F DL T 
Sbjct: 805  RNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTE 864

Query: 964  QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNI 1023
            ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  L   
Sbjct: 865  EQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL--- 921

Query: 1024 GKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHEMRIK 1068
             KG  Q +M N++   M+LRK CNHPYLI G E            P+  + +F  +  I+
Sbjct: 922  SKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHCPE--APDFQLQAMIQ 979

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V    R
Sbjct: 980  AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVRGNLR 1037

Query: 1129 QAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            QAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ
Sbjct: 1038 QAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ 1097

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEELFND 1244
            SK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+L   
Sbjct: 1098 SKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRK 1157

Query: 1245 SPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
              G  G  M E +   +    D++Q  ++R
Sbjct: 1158 --GAYGALMDEEDEGSKFCEEDIDQILQRR 1185


>gi|193203140|ref|NP_491426.2| Protein CHD-7 [Caenorhabditis elegans]
 gi|373253785|emb|CCD61264.1| Protein CHD-7 [Caenorhabditis elegans]
          Length = 2967

 Score =  461 bits (1187), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/695 (39%), Positives = 404/695 (58%), Gaps = 64/695 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDERWKQP----Q 665
            +FL+KW G+S +H  W   ++L  + KR   K++ +K K  ++ I   DE +        
Sbjct: 1059 QFLIKWKGRSYVHCEWKTAAELLEIDKRVEAKIKRFKVKKMSSYIE-DDEDFNSDFVIVD 1117

Query: 666  RVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDAS 725
            RV+ L +  DG     +KW  L Y+E TWE ++    +K        +  ERQ +     
Sbjct: 1118 RVVDLITEDDGQEFVLIKWKSLGYEEVTWEPIEMIPADKVE------LWRERQVID---- 1167

Query: 726  EDELPRGKGDCQQSEIVALTEQPEELK----------GGALFPHQLEALNWLRKCWHKSK 775
                P    + Q+ E       PEE K          G +L  +Q E ++WL  C++ ++
Sbjct: 1168 ----PAKIREKQRPE-------PEEWKKMSTSKVWKNGNSLREYQFEGVDWLLYCYYNAQ 1216

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKTV    F+S +Y ++    P LV+VPLST+ NW+ EF  W  ++N + 
Sbjct: 1217 NCILADEMGLGKTVQTITFLSRIY-DYGIHGPFLVVVPLSTIQNWVREFETWT-DMNAIV 1274

Query: 836  YHGCAKARAIIRQYE--WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
            YHG A AR +++QYE  +        N K +  K + L+TT+E +++D   L+ +PW V 
Sbjct: 1275 YHGSAYAREVLQQYEVFYDKRHCGAKNWKKNFVKIDALITTFETVVSDVEFLKKIPWRVC 1334

Query: 894  VVDEGHRLKNSGSKLF-SLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSS 952
            V+DE HRLKN   KL  + L +F  +HRVLLTGTPLQNNI E+++LLNFL P  F + ++
Sbjct: 1335 VIDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQNNIDELFSLLNFLHPQQFDNSAT 1394

Query: 953  FEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAM 1012
            F E+F    T  +V++L++++ P MLRRLK+D  +++ PK E ++ V+LS +Q ++YRA+
Sbjct: 1395 FLEQFGSCQTDDQVQKLQEILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAI 1454

Query: 1013 LTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE-----------PDSGSVEF 1061
            L +N+    ++ KG +  S++N++M+LRK CNHP+LI G E           PD      
Sbjct: 1455 LERNFS---HLCKGTSAPSLMNVMMELRKCCNHPFLINGAEEAIMNDFRLAHPDWDEETL 1511

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
             H+  I+AS K+ L+  +L  L K+GH+VLIFSQM K+LD+LE++L     P  +ER+DG
Sbjct: 1512 AHKALIQASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYP--FERIDG 1569

Query: 1122 SVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            +V    RQAAI RF+++ S RFVFLL TR+ GLGINL  ADTVII+DSD+NP  D+QA  
Sbjct: 1570 NVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQA 1629

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQK-EVEDILRWGTE 1239
            R HRIGQ K + VYRL+   + E  +   A  KL LD+  +  + + K E   + +   E
Sbjct: 1630 RCHRIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTALKAEGTALSKKDVE 1689

Query: 1240 ELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            EL     G  G  M E N S +    D+E   ++R
Sbjct: 1690 ELLKK--GAYGSIMDEENESSKFNEEDIETILQRR 1722


>gi|145359958|ref|NP_178970.3| chromatin remodeling 5 [Arabidopsis thaliana]
 gi|330251136|gb|AEC06230.1| chromatin remodeling 5 [Arabidopsis thaliana]
          Length = 1724

 Score =  461 bits (1186), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 284/691 (41%), Positives = 403/691 (58%), Gaps = 85/691 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK-RKLENYKAK------YGTTV----INICD--- 658
            EFL+KW G+S++H  W   S L+ L+  +K+ NY  K      Y T +    I + D   
Sbjct: 463  EFLIKWKGQSHLHCQWKTLSDLQNLSGFKKVLNYTKKVTEEIRYRTALSREEIEVNDVSK 522

Query: 659  -------ERWKQPQRVISLRSSKDG----TREAFVKWTGLPYDECTWEK-----LDEPAL 702
                   ++  Q +R+I+ R SKDG      E  VKW GL Y E TWEK       + A+
Sbjct: 523  EMDLDIIKQNSQVERIIADRISKDGLGDVVPEYLVKWQGLSYAEATWEKDVDIAFAQVAI 582

Query: 703  EKY-SHLTDLFVQ---FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFP 758
            ++Y +    + VQ    E+Q  K  AS               +  L EQPE L GG L  
Sbjct: 583  DEYKAREVSIAVQGKMVEQQRTKGKAS---------------LRKLDEQPEWLIGGTLRD 627

Query: 759  HQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
            +QLE LN+L   W    NVILADEMGLGKTV + + +  L    +   P LV+VPLST+ 
Sbjct: 628  YQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPLSTLA 687

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
            NW  EF  W P +N++ Y G   +R + +QYE++     N  K     KFN LLTTYE++
Sbjct: 688  NWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFY-----NEKKVGRPIKFNALLTTYEVV 742

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            L D + L  + W  L+VDE HRLKNS ++L++ L  FS ++++L+TGTPLQN++ E++ L
Sbjct: 743  LKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWAL 802

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKTERM 996
            L+FL P  F +   F E + +L++  + E   L   + PH+LRR+ KD  +++PPK ER+
Sbjct: 803  LHFLDPGKFKNKDEFVENYKNLSSFNESELANLHLELRPHILRRVIKDVEKSLPPKIERI 862

Query: 997  VPVELSSIQAEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHPYLIP---- 1050
            + VE+S +Q +YY+ +L +N+    ++ KGV   Q S+LNIV++L+K CNHP+L      
Sbjct: 863  LRVEMSPLQKQYYKWILERNFH---DLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADH 919

Query: 1051 GTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIE 1110
            G   D      L ++ I +S KL +L  +L  L +  HRVLIFSQM ++LDIL +YL++ 
Sbjct: 920  GYGGDINDNSKLDKI-ILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLR 978

Query: 1111 FGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSD 1169
                 ++R+DGS     RQ A+  FN   S  F FLLSTR+ GLGINLATADTV+I+DSD
Sbjct: 979  --GFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSD 1036

Query: 1170 FNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN------- 1222
            +NP  D+QAM+RAHRIGQ + + +YR V   SVEE IL+ AK+K++LD L +        
Sbjct: 1037 WNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGR 1096

Query: 1223 ------KSGS---QKEVEDILRWGTEELFND 1244
                  K GS   + E+  ILR+G EELF +
Sbjct: 1097 LEKRETKKGSNFDKNELSAILRFGAEELFKE 1127


>gi|449494842|ref|XP_004175326.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 7 [Taeniopygia guttata]
          Length = 3017

 Score =  461 bits (1186), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/669 (40%), Positives = 383/669 (57%), Gaps = 65/669 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTT-VINICDERWKQPQ----- 665
            F VK+   S +H  W    +L      ++K++ +KAK G    ++  D+    P      
Sbjct: 828  FYVKYKNFSYLHCQWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEVD 887

Query: 666  RVISLRSSKDGTREA----FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            R++    S D   E      VKW  LPY++ TWE    +D+  +E++  L     + ER 
Sbjct: 888  RIMDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMER- 946

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             +++  ++D                 +E   E K    L  +QLE +NWL   W+ ++N 
Sbjct: 947  -VERPPADD--------------WKKSESSREYKNNNKLREYQLEGVNWLLFNWYNTRNC 991

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y +     P LV+ PLST+PNW  EF  W   LNVV YH
Sbjct: 992  ILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYH 1049

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R  I+ YE +  DP     K  SYKF+ ++TT+EMIL D   LR +PW  +V+DE
Sbjct: 1050 GSQASRRTIQLYEMYFKDPQGRVIK-GSYKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1108

Query: 898  GHRLKNSGSKLFSLLNSFSFQH-----RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSS 952
             HRLKN   KL   L     +      +VLLTGTPLQN + ++++LL+FL+   FPS ++
Sbjct: 1109 AHRLKNRNCKLLEGLKMMDLKDSSGSIKVLLTGTPLQNTVEKLFSLLHFLETGRFPSETT 1168

Query: 953  FEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAM 1012
            F ++F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+
Sbjct: 1169 FMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAI 1228

Query: 1013 LTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFL 1062
            L KN+  L   G      ++LN +M+LRK CNHPYLI G E           ++ S +F 
Sbjct: 1229 LEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQ 1288

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
             +  I+A+ KL L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG 
Sbjct: 1289 LQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYP--YERIDGR 1346

Query: 1123 VSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R
Sbjct: 1347 VRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 1406

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKE 1229
             HRIGQSK + +YRL+ R S E  +   A  KL LD+ +  + SG           S+KE
Sbjct: 1407 CHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENSTNGVQQLSKKE 1466

Query: 1230 VEDILRWGT 1238
            +ED+LR G 
Sbjct: 1467 IEDLLRKGA 1475


>gi|268564215|ref|XP_002639045.1| C. briggsae CBR-TAG-192 protein [Caenorhabditis briggsae]
          Length = 2869

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 270/678 (39%), Positives = 399/678 (58%), Gaps = 58/678 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDERWKQP----Q 665
            +FL+KW G++  H  W    +L  L KR   K++ +KAK   + I   DE +        
Sbjct: 985  QFLIKWKGRAYCHCDWKTLPELLELDKRVEAKIKRFKAKKAVSYIE-DDEDFNSDFVIVD 1043

Query: 666  RVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDAS 725
            RV+      DG     +KW  L YDE TWE ++        H+ +  V+  RQ    D +
Sbjct: 1044 RVVDYIIEDDGQEFVLIKWKSLGYDEVTWEPIE--------HIPEDKVELWRQRQVIDPA 1095

Query: 726  EDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGL 785
            +    R K   +  E   L+ +     G +L  +Q E ++WL  C++ ++N ILADEMGL
Sbjct: 1096 KV---RDKQRPEPEEWKKLSTKKVWKNGNSLREYQFEGVDWLLYCYYNAQNCILADEMGL 1152

Query: 786  GKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAI 845
            GKTV    F+S +Y ++    P LV+VPLST+ NW+ EF  W  ++N + YHG A AR +
Sbjct: 1153 GKTVQTITFLSQVY-DYGIHGPFLVVVPLSTIQNWVREFETWT-DMNAIVYHGSAHAREV 1210

Query: 846  IRQYE--WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKN 903
            ++QYE  +        N K +  K + L+TT+E +++D   L+ +PW V V+DE HRLKN
Sbjct: 1211 LQQYEVFYDKRHCGAKNWKKNFVKIDALITTFETVVSDVEFLKKIPWRVCVIDEAHRLKN 1270

Query: 904  SGSKLF-SLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTT 962
               KL  + L +F  +HRVLLTGTPLQNNI E+++LLNFL P  F + ++F E+F    T
Sbjct: 1271 RNCKLLVNGLLAFRMEHRVLLTGTPLQNNIEELFSLLNFLHPQQFDNSATFLEQFGSCQT 1330

Query: 963  TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN 1022
              +V++L++++ P MLRRLK+D  +++ PK E ++ V+LS +Q ++YRA+L +N+    +
Sbjct: 1331 DDQVQKLQEILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAILERNFS---H 1387

Query: 1023 IGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE-----------PDSGSVEFLHEMRIKASA 1071
            + KG +  S++N++M+LRK CNHP+LI G E           PD        +  ++AS 
Sbjct: 1388 LCKGTSAPSLMNVMMELRKCCNHPFLINGAEETIMNDFRLAHPDWDDETLAQKALVQASG 1447

Query: 1072 KLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAA 1131
            K+ L+  +L  L K+GH+VLIFSQM K+LD+LE++L     P  +ER+DG+V    RQAA
Sbjct: 1448 KVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLITMSYP--FERIDGNVRGDMRQAA 1505

Query: 1132 ITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKR 1190
            I RF+++ S RFVFLL TR+ GLGINL  ADTVII+DSD+NP  D+QA  R HRIGQ K 
Sbjct: 1506 IDRFSKENSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKL 1565

Query: 1191 LLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG---------SQKEVEDILRWGT--- 1238
            + VYRL+   + E  +   A  KL LD+  +  +          S+K+VE++L+ G    
Sbjct: 1566 VKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTALKAEGTALSKKDVEELLKKGAYGS 1625

Query: 1239 ---EELFNDSPGINGKDM 1253
               EE  NDS   N +D+
Sbjct: 1626 IMDEE--NDSAKFNEEDI 1641


>gi|391339772|ref|XP_003744221.1| PREDICTED: uncharacterized protein LOC100904905 [Metaseiulus
            occidentalis]
          Length = 4725

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 265/660 (40%), Positives = 381/660 (57%), Gaps = 52/660 (7%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAK--YGTTVINICDERWKQPQ-- 665
            EF VK+  +S IH  W    +L++  KR   K+  ++ K    + +++  ++    P   
Sbjct: 1672 EFYVKYKHQSYIHCDWKTAEELELGDKRVSAKIRRFRQKKDMSSNIMDFLEDEAFNPDYT 1731

Query: 666  ---RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDE-PALEKYSHLTDLFVQFE 716
               R++ +  ++D       +   VKW  LPY+E TWE  D+ P L K  H    F +F 
Sbjct: 1732 EVDRILDVTENEDNPDMKLVKYYLVKWRALPYEEATWEVEDDLPDLSKVEH----FWKFR 1787

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKN 776
                K      + P+       +E   + E      G  L  +QLE ++WL  CW+  +N
Sbjct: 1788 NPPPKDQWKIKKRPK------PNEWRQIDESAVYRNGNTLREYQLEGVSWLTFCWYNHQN 1841

Query: 777  VILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
             ILADEMGLGKT+ + +F++ +  ++  + P +++ PLST+ NW  EF  W   LNV+ Y
Sbjct: 1842 CILADEMGLGKTIQSLSFVNEI-VKYGIRGPFMIIAPLSTIGNWQREFETWT-ELNVITY 1899

Query: 837  HGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVD 896
            HG + +R +I++YE    D +   + T   KF VL+TT+E+IL+D   L  +PW   ++D
Sbjct: 1900 HGSSASRNMIQEYEMFYKD-EEGKRITEVQKFQVLITTFEVILSDCQELSNLPWRACIID 1958

Query: 897  EGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEK 956
            E HRLKN   KL   L    F H VLL+GTPLQN++ E+++LLNFL+P  F S   F  +
Sbjct: 1959 EAHRLKNRNCKLIEGLRVLKFDHIVLLSGTPLQNSVEELFSLLNFLEPDRFHSPEEFLAE 2018

Query: 957  FNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKN 1016
            F DL T  +V++LK ++ P MLRRLK+D  +++ PK E ++ VEL+++Q +YYRA+L KN
Sbjct: 2019 FGDLKTEGQVDKLKAVLKPMMLRRLKEDVEKSLAPKEETIIEVELTNVQKKYYRAILEKN 2078

Query: 1017 YQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD-------SGSVEFLHEMRIKA 1069
            +  L    + V   S++N +M+LRK C HPYLI G E         SGSV++  +  ++A
Sbjct: 2079 FTFLCKGSQSVP--SLMNTMMELRKCCIHPYLIAGAEEQILQEARLSGSVDYALQALVQA 2136

Query: 1070 SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQ 1129
            S KL L   +L  L + GHRVLIFSQM + LDILEDYL     P  YER+DG V    RQ
Sbjct: 2137 SGKLVLCDKLLPRLKEGGHRVLIFSQMVRCLDILEDYLIHRKYP--YERLDGRVRGNMRQ 2194

Query: 1130 AAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 1188
            AAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ 
Sbjct: 2195 AAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQQ 2254

Query: 1189 KRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVEDILRWG 1237
            K + +YRL+ R + E  +   A  KL LD+     + K G        S++E+E++L+ G
Sbjct: 2255 KMVKIYRLICRNTYEREMFDKASLKLGLDKAVLQSIQKEGTSGSGGQMSKQEIEELLKKG 2314


>gi|295669680|ref|XP_002795388.1| chromodomain helicase hrp3 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226285322|gb|EEH40888.1| chromodomain helicase hrp3 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1520

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 268/665 (40%), Positives = 380/665 (57%), Gaps = 84/665 (12%)

Query: 613  EFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAK-YGTTVINICD--------ERW- 661
            EF +KW GKS+ H +W   ES       R+LENY  K    +++ + D        E+W 
Sbjct: 305  EFYIKWQGKSHYHATWETLESLASCRGVRRLENYIRKTLSQSILYMRDPEVIPEEKEKWN 364

Query: 662  -------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
                         K  +RVI  R   DG  E +VKW  L YD CTWE    PA       
Sbjct: 365  LDRERDVDAIEDYKLAERVIGSREV-DGETEYYVKWKRLFYDSCTWE----PA------- 412

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQ--------------PEELKGG 754
                      +L  + ++ E+ R    C    I    E               P  +K G
Sbjct: 413  ----------SLVSEIAQREIDRYLDRCSHPPISNKMESNPATRAPFEPIHGTPSYVKNG 462

Query: 755  ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPL 814
             L   Q++ +N++   W + +NV+LADEMGLGKTV   AFIS L      + P +V+VPL
Sbjct: 463  ELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFISWLRHVRNQQGPFIVVVPL 522

Query: 815  STMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTT 874
            STMP+W   F  W P+LN V Y+G   +R II+ YE        ++      KF+VLLTT
Sbjct: 523  STMPSWAETFDNWTPDLNYVVYNGNEVSRNIIKDYELL------MDGNVRRPKFHVLLTT 576

Query: 875  YEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGE 934
            YE +L D++ L  + W+ + VDE HRLKN  S+L+S L  F    R+L+TGTP+QNN+GE
Sbjct: 577  YEYVLVDATFLSQIKWQFMAVDEAHRLKNRDSQLYSRLVEFKSPSRLLITGTPVQNNLGE 636

Query: 935  MYNLLNFLQPASFPSLSSFEEKFNDLTTTQ---KVEELKKLVAPHMLRRLKKDAMQNIPP 991
            +  L++FL P     L   ++   DL+      K+ EL K + P+MLRR K     ++PP
Sbjct: 637  LSALMDFLNPG----LIQIDDDM-DLSCEAAGVKLAELTKSIQPYMLRRTKSKVESDLPP 691

Query: 992  KTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG 1051
            K+E+++ VELS +Q EYY+ +LTKNY  L    KG  +QS+LNI+M+L+K  NHP++ P 
Sbjct: 692  KSEKIIRVELSDVQLEYYKNILTKNYAALNQGSKG-QKQSLLNIMMELKKASNHPFMFPN 750

Query: 1052 TEP-----DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDY 1106
             E       +G  E +  + I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DY
Sbjct: 751  AESRILEGKTGREEMMRAI-ITSSGKMMLLDQLLAKLRKDGHRVLIFSQMVRMLDILADY 809

Query: 1107 LNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVII 1165
            +++      Y+R+DG+++ G R+ +I  FN  D + F FLLSTR+ GLGINL TADTV++
Sbjct: 810  MDVR--GYAYQRLDGTIAAGPRRLSIEHFNAPDSNDFAFLLSTRAGGLGINLMTADTVVL 867

Query: 1166 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG 1225
            +DSD+NP AD+QAM RAHRIGQ+K + VYRLV + +VEE +L+ A+ KL+L+ + + +  
Sbjct: 868  FDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGV 927

Query: 1226 SQKEV 1230
            + KE 
Sbjct: 928  TDKEA 932


>gi|170092399|ref|XP_001877421.1| chromodomain-helicase DNA-binding protein [Laccaria bicolor
            S238N-H82]
 gi|164647280|gb|EDR11524.1| chromodomain-helicase DNA-binding protein [Laccaria bicolor
            S238N-H82]
          Length = 1291

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 267/648 (41%), Positives = 374/648 (57%), Gaps = 68/648 (10%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKY---------------GTTVINIC 657
            F +KW   S++HN+      LK     ++++NY   Y                   +++ 
Sbjct: 122  FHIKWKNFSHLHNTDETYEFLKRFKGLKRVDNYIKAYKIWRSRVDSPGLSREDVEALHLD 181

Query: 658  DERWKQP-------QRVISLRSSKDGTREAFVKWTGLPYDECTWE--------KLDEPAL 702
             ER KQ        +R+++ R SKDG  E F KW  L Y+ CTWE          DE A 
Sbjct: 182  KEREKQELEMFRNVERIVAHRESKDGDMEYFCKWNSLNYEHCTWELQKDVNPIAKDEIAA 241

Query: 703  EKYSHLTDLF----VQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK--GGAL 756
             +       F    V + RQ             G+   Q+     +T  P+ ++  GG L
Sbjct: 242  YRLREAEGKFPYKSVSYSRQ-------------GRPTFQK-----ITSDPDYIQATGGEL 283

Query: 757  FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLST 816
               QL  LNWL   W K +N ILADEMGLGKTV   AF+S L+ E     P LV+VPLST
Sbjct: 284  KDFQLTGLNWLAYLWSKGENGILADEMGLGKTVQTVAFLSYLFHEMHQYGPFLVIVPLST 343

Query: 817  MPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYE 876
            +  W  +FA WAP++NV+ Y G A AR +IR +E+  S     NKK    K NVLLTTYE
Sbjct: 344  ITAWQTQFAAWAPDMNVITYIGTAAAREVIRTHEFGPS-----NKKL---KMNVLLTTYE 395

Query: 877  MILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMY 936
            + L DS  L  + W+ L VDE HRLKNS S+L+  L SFS   ++L+TGTPLQNN+ E+ 
Sbjct: 396  LTLRDSKELGDIKWQALAVDEAHRLKNSESQLYEALRSFSAASKLLITGTPLQNNVKELL 455

Query: 937  NLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERM 996
            +L++FL P  F   + F+    D+   +K++EL + +   MLRRLKKD + ++P K+ER+
Sbjct: 456  SLMHFLMPEKFALTNEFD--LTDIDHEEKIKELHEQLESLMLRRLKKDVLTSLPTKSERI 513

Query: 997  VPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS 1056
            + VE+S++Q  +Y+ +LTKN+  L     G    S+LNI M+L+K  NHPYL  G E  +
Sbjct: 514  LRVEMSALQTHFYKNILTKNFAGLVKSANGNNNISLLNIAMELKKAANHPYLFDGAEVRT 573

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
             + E   +  +  S K+ LL  +L  L ++GHRVLIFSQM ++LDIL DY+++      +
Sbjct: 574  DNNEETLKGLVMNSGKMVLLDKLLARLRQDGHRVLIFSQMVRMLDILSDYMSLR--GYLH 631

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            +R+DG V+   R+ +I  FN   S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D
Sbjct: 632  QRLDGMVASEARKKSIAHFNTPGSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQND 691

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK 1223
            +QAM RAHRIGQ   + VYR V + ++EE +L+ AKKK++L+   +N+
Sbjct: 692  LQAMARAHRIGQKSHVSVYRFVSKDTMEEDVLERAKKKMVLEYAIINQ 739


>gi|395828998|ref|XP_003787648.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Otolemur
            garnettii]
          Length = 2711

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 380/666 (57%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 316  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 375

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 376  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 435

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 436  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 482

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 483  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 540

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 541  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 599

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 600  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 659

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 660  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 719

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  +++F  +
Sbjct: 720  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKSHSPD--ALDFQLQ 774

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 775  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 832

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 833  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 892

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 893  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 952

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 953  LLRKGA 958


>gi|313231904|emb|CBY09016.1| unnamed protein product [Oikopleura dioica]
          Length = 1677

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 248/589 (42%), Positives = 352/589 (59%), Gaps = 49/589 (8%)

Query: 677  TREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGK 733
            TR   VKW GL YDECTWE    +D+  +E +   +      +R+  K+ +    + + +
Sbjct: 306  TRHFLVKWCGLAYDECTWELEADVDQVKIECFRKFS------KRKPYKRPSDRPPISQWR 359

Query: 734  GDCQQSEIVALTEQPEELKGGA-LFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSAC 792
                        E P+  K    L  +Q+E ++WL   W++ +N ILADEMGLGKT+ + 
Sbjct: 360  K----------LEHPQRFKNSCELREYQVEGVSWLLFNWYQKRNCILADEMGLGKTIQSI 409

Query: 793  AFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWH 852
             FI  + CE   + P L++VPLST+ NW+ EF  W  +LN + YHG A++R +I QYE +
Sbjct: 410  TFIQKI-CETNHRGPFLIVVPLSTVGNWIREFETWT-DLNAIVYHGSAQSRQMIHQYELY 467

Query: 853  ASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLL 912
              D     K+   ++F+ L+TTYEMI+AD   +R V W+++++DE HRLKN+ SKL   L
Sbjct: 468  QRDKKGYPKR-GDFRFDALITTYEMIVADIPEIRNVNWQLMIIDEAHRLKNTKSKLAENL 526

Query: 913  NSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKL 972
             +   +H+VLLTGTPLQNNI E+Y LLNF+ P  F  +  F  ++  LT  + VE+++ +
Sbjct: 527  KNMHIEHKVLLTGTPLQNNIEELYALLNFMNPTDFYDIGYFMREYGILTNKEHVEKMQNV 586

Query: 973  VAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSM 1032
            + P MLRRLK+D  +++ PK E ++ VEL++IQ +YYRA+L +N+  L          S+
Sbjct: 587  LKPIMLRRLKEDVEKSLAPKEETIIEVELTNIQKKYYRAILERNFDFLSKGASTGNVPSL 646

Query: 1033 LNIVMQLRKVCNHPYLIPGTEPD-------SGSVEFLHEMRIKASAKLTLLHSMLKVLYK 1085
            +N +M+LRK CNHP+LI G E          G V       ++AS K+ L+H +L  L  
Sbjct: 647  MNTMMELRKCCNHPFLIKGAEDKIIDEYRAKGEVADPLTSIVQASGKMVLIHKLLPKLKA 706

Query: 1086 EGHRVLIFSQMTKLLDILEDYL-NIEFGPKTYERVDGSVSVGDRQAAITRF-NQDKSRFV 1143
             GH+VLIFSQM ++LDILEDYL  +  G   +ER+DG +   DRQAAI RF   D  RFV
Sbjct: 707  GGHKVLIFSQMIRVLDILEDYLYQMSMG---FERLDGRIRGNDRQAAIDRFCKPDSDRFV 763

Query: 1144 FLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVE 1203
            FLL TR+ GLGINL  ADTVII+DSD+NP  D+QA  R HRIGQ K + +YRL+   + E
Sbjct: 764  FLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKEVKIYRLLTSKTYE 823

Query: 1204 ERILQLAKKKLMLDQLFVN--------------KSGSQKEVEDILRWGT 1238
              +   A  KL LD+  +                S S+KEVED+L+ G 
Sbjct: 824  REMFDRASLKLGLDRAVLQSMSGTSGKDAGGPMSSLSKKEVEDLLKKGA 872


>gi|158293462|ref|XP_314800.4| AGAP008698-PA [Anopheles gambiae str. PEST]
 gi|157016718|gb|EAA10171.4| AGAP008698-PA [Anopheles gambiae str. PEST]
          Length = 2083

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/684 (40%), Positives = 391/684 (57%), Gaps = 69/684 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENY-----------KAKYGTTVINI-- 656
            +FL+KW G S +H +W  E  L   KV   +KLENY           K + G   I+   
Sbjct: 439  QFLIKWTGWSYLHCTWESEETLREQKVKGMKKLENYIKREQQLEYWRKYQAGPEDIDYYE 498

Query: 657  CDERWKQP--------QRVISLRSSK---DGTREAFVKWTGLPYDECTWEKLDEPALEKY 705
            C +  +Q         +R+I+  +     D   E   KW  LPY + TWE   +  L + 
Sbjct: 499  CQQELQQDLLKSYYHVERIIAQANKAEEGDSGLEYLCKWESLPYSDSTWE---DAGLIRR 555

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL---KGGALFPHQLE 762
                 +    ER+  ++  S+      K    +     L +QPE L   +G  L  +Q++
Sbjct: 556  KWQQKIVEFHEREESRRTPSK----HCKAIRYRPNFKHLKQQPEYLGEERGLKLRDYQMD 611

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  +VILADEMGLGKT+    F+  L+   +   P L +VPLSTMP W  
Sbjct: 612  GLNWLILTWCKDNSVILADEMGLGKTIQTICFLYYLFKSQQLYGPFLCVVPLSTMPAWQR 671

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            EF +WAP LNVV Y G  ++R IIRQYEW         + T   KFN +LTTYE++L D 
Sbjct: 672  EFGIWAPELNVVTYLGDVQSREIIRQYEW-------CYESTKKLKFNAILTTYEILLKDK 724

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+F+
Sbjct: 725  TFLGSIGWASLLVDEAHRLKNDDSLLYKALKEFDTNHRLLITGTPLQNSLKELWALLHFI 784

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FE  + + T  +   +L K + P++LRR+KKD  +++P K E+++ VE++
Sbjct: 785  MPERFESWDDFERNYGNTTNDKSYTKLHKELEPYILRRVKKDVEKSLPAKVEQILRVEMT 844

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS--GSVE 1060
            SIQ +YY+ +L+KN+  LR   KG    + LNIV++L+K CNH  L    E ++   S +
Sbjct: 845  SIQRQYYKWILSKNFDALRKGMKGSV-GTFLNIVIELKKCCNHAALTRPIEFETQRNSQQ 903

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             + +  +K S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL       +++R+D
Sbjct: 904  DVVQQLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQKRHF--SFQRLD 961

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA 
Sbjct: 962  GSIKGELRKQALDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQ 1021

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSG--- 1225
             RAHRIGQ  ++ +YRLV   SVEE I++ AK+K++LD L +           +K+G   
Sbjct: 1022 ARAHRIGQKNQVNIYRLVTAHSVEENIVERAKQKMVLDHLVIQRMDTTGRTVLDKNGGSN 1081

Query: 1226 -----SQKEVEDILRWGTEELFND 1244
                 ++ E+  IL++G EELF +
Sbjct: 1082 TSNPFNKDELSAILKFGAEELFKE 1105


>gi|121701939|ref|XP_001269234.1| chromodomain helicase (Chd1), putative [Aspergillus clavatus NRRL 1]
 gi|119397377|gb|EAW07808.1| chromodomain helicase (Chd1), putative [Aspergillus clavatus NRRL 1]
          Length = 1506

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/652 (40%), Positives = 384/652 (58%), Gaps = 48/652 (7%)

Query: 611  SYEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVI--------------- 654
            S+EF +KW GKS+ H +W   ES L   + R+++NY  K  +  +               
Sbjct: 275  SFEFYIKWQGKSHYHATWETYESLLNCRSTRRVDNYVRKVLSEELRMNHDEDAMPEEREK 334

Query: 655  -NICDER-------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYS 706
             N+  ER       +KQ +RVI+ R   +GT E  VKW  L YD CTWE  +    E   
Sbjct: 335  WNLDRERDVDAIEDYKQVERVIATRDGDEGT-EYLVKWKRLFYDSCTWES-ESLVSEIAQ 392

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNW 766
               D F+  +R +    + ++E+        +     +   P  L+ G L   Q++ +N+
Sbjct: 393  REIDRFL--DRSSHPPLSDKNEM----NPATRKPFEPIKGTPTFLQNGELKDFQVKGVNF 446

Query: 767  LRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFAL 826
            +   W K++NV+LADEMGLGKTV   AFI+ L    + + P +V+VPLSTMP+W   F  
Sbjct: 447  MAFNWVKNRNVVLADEMGLGKTVQTVAFIAWLRHVRRQQGPFIVVVPLSTMPSWAETFDN 506

Query: 827  WAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLR 886
            W+P+LN + Y+G   AR +++ +E        ++      +FNVLLTTYE +L D++ L 
Sbjct: 507  WSPDLNYIVYNGNEAARNMLKDHELM------IDGNPRRSRFNVLLTTYEYVLQDAAFLS 560

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
               W+ + VDE HRLKN  S+L+  L  F    R+L+TGTP+QNN+ E+  L++FL P  
Sbjct: 561  QFKWQFMAVDEAHRLKNRDSQLYQKLLEFKSPARLLITGTPIQNNLAELAALMDFLNPGV 620

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQA 1006
                   +   N    +QK+ EL   + P+MLRR K     ++PPKTE+++ VELS +Q 
Sbjct: 621  IDV--DVDMDLNAEAASQKLAELTNAIQPYMLRRTKSKVESDLPPKTEKIIRVELSDVQL 678

Query: 1007 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFLHE 1064
            EYY+ +LTKNY  L +  KG  +QS+LNI+M+L+K  NHP++ P  E     GS      
Sbjct: 679  EYYKNILTKNYAALNDGAKG-QKQSLLNIMMELKKASNHPFMFPNAEARILEGSTRREDI 737

Query: 1065 MR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
            +R  I +S K+ LL  +L  L ++GHRVLIFSQM K+LD+L DY+  E    TY+R+DG+
Sbjct: 738  LRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGDYM--ESRGYTYQRLDGT 795

Query: 1123 VSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ AI  FN  D S F FLLSTR+ GLGINL TADTV+++DSD+NP AD+QAM R
Sbjct: 796  IPAVSRRLAIEHFNAPDSSDFCFLLSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMAR 855

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            AHRIGQ++ + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  ++
Sbjct: 856  AHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEASEL 907


>gi|348505811|ref|XP_003440454.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 2-like [Oreochromis niloticus]
          Length = 1812

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 295/801 (36%), Positives = 435/801 (54%), Gaps = 106/801 (13%)

Query: 614  FLVKWVGKSNIHNSWIPE---SQLKVLAKRKLENYKAKYG-------------------- 650
            +L+KW G S IHN+W      +Q KV   +KLEN+K K                      
Sbjct: 326  YLIKWKGWSYIHNTWESMDSLTQQKVKGMKKLENFKKKNDELNSWLRKASPEDIEFHNCQ 385

Query: 651  TTVINICDERWKQPQRVISLRSSK----------------DGTREAFVKWTGLPYDECTW 694
              + +  +++++  +R+I+ ++ K                    E   KW GLPY EC+W
Sbjct: 386  QELTSDLNKQFQIVERIIATKTGKTPGSSDFPSHSHKTPSSNEPEFLCKWMGLPYSECSW 445

Query: 695  EKLDEPAL--EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDC----QQSEIVALTEQP 748
            E   + AL  +K+ H  D F+   R + K   S+D        C    Q+   VAL +QP
Sbjct: 446  E---DGALVRKKFQHCIDSFMN--RNSSKTVPSKD--------CKVLKQRPRFVALKKQP 492

Query: 749  EELKGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
              +      L  +QL+ LNWL   W +  +VILADEMGLGKT+   +F+S L+ + +   
Sbjct: 493  SYIGDSNLELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYG 552

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSY 866
            P L++VPLST+ +W  EF  WAP++NVV Y G   +R IIR YEW       +N +T   
Sbjct: 553  PFLLVVPLSTLTSWQREFDTWAPDMNVVVYLGDVMSRKIIRDYEW-------VNHQTKRI 605

Query: 867  KFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGT 926
            +F+ LLTTYE++L D   L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGT
Sbjct: 606  RFSALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLMEFRSNHRLLITGT 665

Query: 927  PLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAM 986
            PLQN++ E+++LL+FL P  F S   FE++          + L K++ P +LRR+KKD  
Sbjct: 666  PLQNSLKELWSLLHFLMPDKFDSWEDFEDEHGK-GRENGYQSLHKVLEPFLLRRVKKDVE 724

Query: 987  QNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHP 1046
            +++P K E+++ VE+S+ Q ++Y+ +LT+NY+ L    +G +    LNIVM+L+K CNH 
Sbjct: 725  KSLPAKVEQILRVEMSAQQKQFYKWILTRNYKALAKGTRG-SSAGFLNIVMELKKCCNHS 783

Query: 1047 YLIPGTEPDSGSVEFLHE---MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDIL 1103
            +LI   +P+ G  E   E     ++ S KL LL  +L  L + G+RVLIFSQM ++LDIL
Sbjct: 784  FLI--KQPEDGDAETQQEHLQALVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDIL 841

Query: 1104 EDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADT 1162
             +YL+ +  P  ++R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADT
Sbjct: 842  AEYLSKKRYP--FQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADT 899

Query: 1163 VIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1222
            V+I+DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L + 
Sbjct: 900  VVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQ 959

Query: 1223 KSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVY 1282
            +  +           T     DS   N  +   N  + EE    L+        G  D++
Sbjct: 960  RMDT-----------TGRTVLDS---NSGNTNSNPFNKEELTAILK-------FGAEDLF 998

Query: 1283 QDKCTEGSTKIVWDENAIARLLDRSNLQSGSTDLAEGDLENDMLGSVKATEWN--EETTE 1340
            ++   E S     D + I RL +      GS+   E      +L   K   ++  EE+T 
Sbjct: 999  KEAEGEESEPQEMDIDEILRLAETRESDQGSSATDE------LLSQFKVANFSSMEESTP 1052

Query: 1341 DQAESPVAAVDDASAENSERK 1361
            +  E P+   DD   E   RK
Sbjct: 1053 EFEEKPIPEWDDIIPEEQRRK 1073


>gi|254578924|ref|XP_002495448.1| ZYRO0B11638p [Zygosaccharomyces rouxii]
 gi|238938338|emb|CAR26515.1| ZYRO0B11638p [Zygosaccharomyces rouxii]
          Length = 1478

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 302/784 (38%), Positives = 432/784 (55%), Gaps = 80/784 (10%)

Query: 516  REDDKDSDPVAVNGKVQDESAVSTEDLGERNDKMVVEDADVSLR-DNEGLTVSEIHITCE 574
            R  ++ S  V  N    DE  + ++D G        ++ D  +  D+E +  S    T +
Sbjct: 124  RFSNRTSKAVNYNIDYSDEDLLESDDGGRAKANTNNDEIDDEMNSDDEQMYYS---TTPQ 180

Query: 575  STDKD--VD--VGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIP 630
            + D+D  VD  +  K    +  +V E  V E +Q K    +Y FL+KW  +S +HN+W  
Sbjct: 181  AADEDRGVDLVITHKLKDDIDPQV-ESQVPELSQCKE---NYLFLIKWSDESYLHNTWEE 236

Query: 631  ESQLKVL-AKRKLENYKAKY----------------GTTVINICDER-------WKQPQR 666
               LK     ++++NY  ++                   ++++  ER       +++P+R
Sbjct: 237  YENLKQYRGIKRVDNYCKQFIIQDLEFRLDPYVTAEDLEIMDMERERRLDEFKEYEEPER 296

Query: 667  VI-SLRSSKD---GTREAFVKWTGLPYDECTWEKLDEP---ALEKYSHLTDLFVQFERQT 719
            ++ S R + D      +  VKW  L YD  TWE   E    A E+  H       F+ +T
Sbjct: 297  IVDSQRITDDEGSSQLQYLVKWHRLNYDGATWENATEIVKLAPEQVKH-------FQNRT 349

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
              K   +          Q+     L+ QP  +K G L   QL  +NW+   W K+ N IL
Sbjct: 350  NSKILPQYSS---SYSSQRPRFEKLSVQPPFIKNGELRDFQLTGINWMAFLWSKNDNGIL 406

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKTV   AFIS L    +   P L++VPLSTMP+W   F  WAP LN + Y G 
Sbjct: 407  ADEMGLGKTVQTVAFISWLIFARRQNGPHLIVVPLSTMPSWQETFEKWAPELNCICYMGN 466

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
             K+R  IR+YE++ ++P    KK  + KFNVLLTTYE +L D      + W+ + VDE H
Sbjct: 467  QKSRDAIREYEFY-TNPQAKGKK--NVKFNVLLTTYEYVLKDRYEFSTIRWQFMAVDEAH 523

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN+ S L+  LNS    +R+L+TGTPLQNNI E+  L+NFL P  F      + +  D
Sbjct: 524  RLKNAESSLYESLNSLKVSNRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQD 583

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
                Q + +L + + P +LRRLKKD  +++P KTER++ VELS +Q EYYR +LTKNY  
Sbjct: 584  DEQEQYIRDLHQRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYRNILTKNYSA 643

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP--------DSGSVEFLHEMRIKASA 1071
            L    KG    S+LNI+ +L+K  NHPYL    E          + S E +    I +S 
Sbjct: 644  LTAGAKG-GHFSLLNIMNELKKGSNHPYLFDNAEERVLEKFGDGNRSRENILRGLIMSSG 702

Query: 1072 KLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAA 1131
            K+ LL  +L  L K+GHRVLIFSQM ++LDIL DYL+I+     ++R+DG+V    R+ +
Sbjct: 703  KMVLLDKLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIK--GINFQRLDGTVPSNQRRIS 760

Query: 1132 ITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKR 1190
            I  FN  D + FVFLLSTR+ GLGINL TADTVII+DSD+NP AD+QAM RAHRIGQ   
Sbjct: 761  IDHFNAPDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNH 820

Query: 1191 LLVYRLVVRASVEERILQLAKKKLMLDQLFVN---KSGSQK---------EVEDILRWGT 1238
            ++VYRLV + +VEE +L+ A+KK++L+   ++     G+Q          E+ +IL++G 
Sbjct: 821  VMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNQYSKKNEPSAGELSEILKFGA 880

Query: 1239 EELF 1242
              +F
Sbjct: 881  GNMF 884


>gi|410928769|ref|XP_003977772.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Takifugu
            rubripes]
          Length = 2526

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 277/675 (41%), Positives = 389/675 (57%), Gaps = 64/675 (9%)

Query: 604  QVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER- 660
            +V+    S EF VK+   S +H  W    QL+   +  +K++ +K K+        +E  
Sbjct: 730  EVRQYGNSEEFFVKYKNYSYLHCEWASLEQLERDKRIHQKIKRFKTKHAQMSRLFQEEEE 789

Query: 661  -----WKQPQRVISLRSSKD-----GTREAFVKWTGLPYDECTWE---KLDEPALEKYSH 707
                 + +  R++ +  S D           VKW  LPY++ TWE    +DE  +E++  
Sbjct: 790  PFNPDYVEVDRILDVSHSVDKDNGENVIYYLVKWCSLPYEDATWELNEDVDEGKVEEFRK 849

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
                 +Q  +  LK+       PR       S    L E  E      L  +QLE +NWL
Sbjct: 850  -----IQNRQPRLKR------TPRPS----PSSWKKLEESREYKNANTLREYQLEGVNWL 894

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W+  +N ILADEMGLGKT+ +   +S +Y     + P LV+ PLST+ NW  EFA W
Sbjct: 895  LFNWYNRQNCILADEMGLGKTIQSITLLSEIYAA-NIQGPFLVIAPLSTITNWEREFATW 953

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASD-PDNLNKKTSSYKFNVLLTTYEMILADSSHLR 886
              N+N + YHG   +R +I+QYE +  D  D+L     +YKF+ L+TT+EMIL+D   LR
Sbjct: 954  T-NMNAIVYHGSLASRQMIQQYEMYCKDEKDHL--IPGAYKFDALITTFEMILSDCPELR 1010

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
             + W  +++DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+PA 
Sbjct: 1011 EISWRCVIIDEAHRLKNRNCKLLDSLKMMDQEHKVLLTGTPLQNTVEELFSLLHFLEPAQ 1070

Query: 947  FPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQA 1006
            FPS   F  +F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL+ IQ 
Sbjct: 1071 FPSEIEFLREFGDLKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDIQK 1130

Query: 1007 EYYRAMLTKNYQILRNIGKGVAQQ--SMLNIVMQLRKVCNHPYLIPGTEP---------- 1054
            +YYRA+L +N+  L ++G        ++LN +M+LRK CNHPYLI G E           
Sbjct: 1131 KYYRAILERNFSFL-SLGANSNSNVPNLLNTMMELRKCCNHPYLINGAEEKIVAELREVY 1189

Query: 1055 DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL-NIEFGP 1113
            D  + +F  +  I+++ KL LL  +L  L   GH+VLIFSQM + LDILEDYL N  +  
Sbjct: 1190 DPLAPDFHLQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRY-- 1247

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              YER+DG V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT +I+DSD+NP
Sbjct: 1248 -LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNP 1306

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG------ 1225
              D+QA  R HRIGQSK + VYRL+ R S E  +L  A  KL LD+ +  + SG      
Sbjct: 1307 QNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKESNI 1366

Query: 1226 ---SQKEVEDILRWG 1237
               S+KE+ED+LR G
Sbjct: 1367 QQFSKKEIEDLLRKG 1381


>gi|242011216|ref|XP_002426351.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212510428|gb|EEB13613.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 4944

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 271/673 (40%), Positives = 383/673 (56%), Gaps = 73/673 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDERWKQP----- 664
            E+LVK+   S +H  W  E +L+   +R   K++ ++ K    V NI +    +P     
Sbjct: 1970 EYLVKYRNFSYLHCEWKTEEELRRGDRRIFSKIKRFQQKMANNV-NIFENLEDEPFNPDF 2028

Query: 665  ---QRVISLRSSKD-GT----REAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFV 713
                RV+ +    D GT    +   VKW  + YD+ TWE    +D  A+++       F 
Sbjct: 2029 IEIDRVLDVAEHVDPGTNVTVKHYLVKWRSMQYDDSTWELEADVDPLAIKQ-------FE 2081

Query: 714  QFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHK 773
            +F +   K+     + P      Q  +   L + P       L  +QLE LNWL   WH 
Sbjct: 2082 KFRKIPPKEKCKAKKRP------QPDQWRKLEKSPVFKNNNTLRLYQLEGLNWLLFSWHN 2135

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
             +N ILADEMGLGKT+ + AF++S+Y  +  + P LV+ PLST+PNW  EF  W  +LNV
Sbjct: 2136 GRNCILADEMGLGKTIQSLAFVNSVY-NYGIRGPFLVIAPLSTIPNWQREFEAWT-DLNV 2193

Query: 834  VEYHGCAKARAIIRQYEWH-ASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEV 892
            V YHG A +  +I++YE++  +D  NL K    +KFNVL+TT+E+I+  S  L+   W +
Sbjct: 2194 VVYHGSAASLQMIQEYEFYFKNDKGNLMKDL--HKFNVLITTFELIITHSQELKSFNWRL 2251

Query: 893  LVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSS 952
             V+DE HRLKN   KL   L   + +HRVLL+GTPLQNN+ E+++LLNFL+PA F S  +
Sbjct: 2252 CVIDEAHRLKNRNCKLLEGLRLLNMEHRVLLSGTPLQNNVNELFSLLNFLEPAQFSSSDA 2311

Query: 953  FEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAM 1012
            F ++F  L T  +V +L+ ++ P MLRR+K+D  +++ PK E +V VEL++IQ +YYR +
Sbjct: 2312 FLQEFGALKTESEVNKLQAILKPMMLRRMKEDVEKSLAPKEETVVEVELTNIQKKYYRGI 2371

Query: 1013 LTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE--------------PDSGS 1058
            L +N+  L          +++N +M+LRK C HPYL+ G E              PD+  
Sbjct: 2372 LERNFSFLSKGTTSSNIPNLMNTMMELRKCCIHPYLLNGAEEQIQIDYRNVNGDDPDAYF 2431

Query: 1059 VEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
               +H     +S K+ L+  +L  L   GHRVLIFSQM K LDILEDYL   +   ++ER
Sbjct: 2432 KALIH-----SSGKMVLVDKLLPKLKSNGHRVLIFSQMVKCLDILEDYL--IYRKYSFER 2484

Query: 1119 VDGSVSVGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DG +    RQAAI RF   D  RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+Q
Sbjct: 2485 IDGRIRGDLRQAAIDRFCRPDSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQ 2544

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF-------------VNKS 1224
            A  R HRIGQ K + VYRL+ R + E  +   A  KL LD+               V K 
Sbjct: 2545 AQARCHRIGQQKMVKVYRLICRNTYEREMFDKASLKLGLDKAVLQSMNTSQGGKDNVQKQ 2604

Query: 1225 GSQKEVEDILRWG 1237
             S+KE+ED+L+ G
Sbjct: 2605 LSKKEIEDLLKRG 2617


>gi|410953850|ref|XP_003983583.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Felis catus]
          Length = 2775

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 278/694 (40%), Positives = 390/694 (56%), Gaps = 58/694 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 376  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 435

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             RV+ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 436  DRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 495

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 496  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 542

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 543  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 600

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 601  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 659

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 660  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 719

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 720  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 779

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 780  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 834

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 835  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 892

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 893  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 952

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEE 1240
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+
Sbjct: 953  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVED 1012

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            L     G  G  M E +   +    D++Q  ++R
Sbjct: 1013 LLRK--GAYGALMDEEDEGSKFCEEDIDQILQRR 1044


>gi|301766196|ref|XP_002918518.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like, partial
            [Ailuropoda melanoleuca]
          Length = 2710

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 278/694 (40%), Positives = 390/694 (56%), Gaps = 58/694 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 311  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 370

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             RV+ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 371  DRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 430

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 431  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 477

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 478  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 535

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 536  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 594

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 595  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 654

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 655  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 714

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 715  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 769

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 770  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 827

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 828  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 887

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEE 1240
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+
Sbjct: 888  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVED 947

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            L     G  G  M E +   +    D++Q  ++R
Sbjct: 948  LLRK--GAYGALMDEEDEGSKFCEEDIDQILQRR 979


>gi|354491180|ref|XP_003507734.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like
            [Cricetulus griseus]
          Length = 2714

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 275/692 (39%), Positives = 388/692 (56%), Gaps = 54/692 (7%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 317  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYIEI 376

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L +  E + 
Sbjct: 377  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQILPEVKH 436

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L    E      L  +QLE +NWL   W+  KN IL
Sbjct: 437  VERPAS---------DAWQK----LETSREYKNSNRLREYQLEGMNWLLFNWYNRKNCIL 483

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 484  ADEMGLGKTIQSITFLSEIFVR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 541

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 542  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 600

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 601  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 660

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 661  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 720

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMR 1066
            L    KG  Q +M N++   M+LRK CNHPYLI G E            S + +F  +  
Sbjct: 721  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAM 777

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVG 1126
            I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V   
Sbjct: 778  IQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVRGN 835

Query: 1127 DRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1185
             RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRI
Sbjct: 836  LRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 895

Query: 1186 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEELF 1242
            GQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+L 
Sbjct: 896  GQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLL 955

Query: 1243 NDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
                G  G  M E +   +    D++Q  ++R
Sbjct: 956  RK--GAYGALMDEEDEGSKFCEEDIDQILQRR 985


>gi|281352812|gb|EFB28396.1| hypothetical protein PANDA_006982 [Ailuropoda melanoleuca]
          Length = 2707

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 278/694 (40%), Positives = 390/694 (56%), Gaps = 58/694 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 308  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 367

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             RV+ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 368  DRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 427

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 428  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 474

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 475  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 532

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 533  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 591

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 592  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 651

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 652  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 711

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 712  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 766

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 767  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 824

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 825  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 884

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEE 1240
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+
Sbjct: 885  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVED 944

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            L     G  G  M E +   +    D++Q  ++R
Sbjct: 945  LLRK--GAYGALMDEEDEGSKFCEEDIDQILQRR 976


>gi|119596382|gb|EAW75976.1| chromodomain helicase DNA binding protein 6, isoform CRA_c [Homo
            sapiens]
          Length = 2750

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 379/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 353  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 412

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 413  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 472

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 473  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 519

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 520  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 577

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 578  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 636

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 637  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 696

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 697  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 756

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 757  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 811

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 812  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 869

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 870  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 929

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 930  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 989

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 990  LLRKGA 995


>gi|440910953|gb|ELR60688.1| Chromodomain-helicase-DNA-binding protein 6, partial [Bos grunniens
            mutus]
          Length = 2723

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 277/694 (39%), Positives = 390/694 (56%), Gaps = 58/694 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 320  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 379

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 380  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 439

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 440  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 486

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 487  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 544

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 545  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 603

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 604  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 663

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 664  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 723

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 724  L---SKGANQHNMPNLINTMMELRKCCNHPYLISGAEEKILEDFRKTHSPD--APDFQLQ 778

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 779  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 836

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 837  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 896

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEE 1240
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+
Sbjct: 897  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVED 956

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            L     G  G  M E +   +    D++Q  ++R
Sbjct: 957  LLRK--GAYGALMDEEDEGSKFCEEDIDQILQRR 988


>gi|302681469|ref|XP_003030416.1| hypothetical protein SCHCODRAFT_58011 [Schizophyllum commune H4-8]
 gi|300104107|gb|EFI95513.1| hypothetical protein SCHCODRAFT_58011 [Schizophyllum commune H4-8]
          Length = 1312

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/630 (40%), Positives = 379/630 (60%), Gaps = 47/630 (7%)

Query: 661  WKQPQRVISLR--SSKDGTR--EAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFE 716
            ++ P+R++S R  ++ DG    E F KWT LPY+ CTWE   E A     HL + + Q E
Sbjct: 146  YRIPERIVSHRQITNPDGDTVIEYFCKWTNLPYEHCTWEPHSEIA-PIAKHLIEAYRQRE 204

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK--GGALFPHQLEALNWLRKCWHKS 774
                  DA      +     ++ +   +   P+ +K  GG L   QL  LNWL   W   
Sbjct: 205  -----SDAYFPYKSQQYAVNKRPKFEKIARDPDYIKENGGELKDFQLTGLNWLAFTWSHG 259

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
             N ILADEMGLGKTV + ++IS L+   +   P LV+VPLST+  W A+FA WAP+++V+
Sbjct: 260  LNGILADEMGLGKTVQSVSYISWLFHSMQVYGPFLVVVPLSTITAWQAQFASWAPDISVI 319

Query: 835  EYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
             Y G A +R IIR YE+  S P  +       K NV+LTTYEM+L D+++L  + W+ L+
Sbjct: 320  PYIGHATSRQIIRNYEF--SGPPVITFDPRRLKVNVILTTYEMVLKDANYLGQIKWQSLL 377

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            VDE HRLKNS S+L+  L SF+  +++L+TGTPLQNN+ E+  L++FL P  F   S F+
Sbjct: 378  VDEAHRLKNSESELYKTLMSFNCANKLLITGTPLQNNVKELLALMHFLHPERFSLDSEFD 437

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
               ND    +K++ L K ++  +LRR+KKD + ++P K+ER++ VE+S++Q  +Y+ +LT
Sbjct: 438  --LNDADHEEKIQNLHKELSNFLLRRVKKDVLASLPTKSERILRVEMSTLQTTFYKNILT 495

Query: 1015 KNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLT 1074
            +N+Q L     G +  S+LNIVM+L+K  NHP+L  G E  S   E   +  +  S K+ 
Sbjct: 496  RNFQGLVRSANGNSNISLLNIVMELKKAANHPFLFDGAELRSDDNEATLKGLVMNSGKMV 555

Query: 1075 LLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITR 1134
            LL  +L  L ++GHRVLIFSQM ++LDIL DY+++      ++R+DG+++   R+ A+  
Sbjct: 556  LLDKLLARLRQDGHRVLIFSQMVRMLDILSDYMSLR--GYIHQRLDGTIASDARKKAMAH 613

Query: 1135 FNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            FN   S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM RAHRIGQ   + V
Sbjct: 614  FNMPGSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSV 673

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFVNK---------------------SGSQKEVED 1232
            YR V + +VEE IL+ AK K++L+   +N+                     S ++ E+  
Sbjct: 674  YRFVSKDTVEEEILEKAKAKMVLEYAIINQMDTTQAHLGAKEKKPEQINKDSYTKDELTA 733

Query: 1233 ILRWGTEELFNDSPGINGKDMGENNTSIEE 1262
            +L++G +++F+       KD    N  ++E
Sbjct: 734  VLKYGAQKMFD-------KDASSQNQKLDE 756


>gi|345790058|ref|XP_534421.3| PREDICTED: chromodomain-helicase-DNA-binding protein 6 isoform 1
            [Canis lupus familiaris]
          Length = 2715

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 278/694 (40%), Positives = 390/694 (56%), Gaps = 58/694 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             RV+ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 378  DRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 722  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 834

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 835  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 894

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEE 1240
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+
Sbjct: 895  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVED 954

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            L     G  G  M E +   +    D++Q  ++R
Sbjct: 955  LLRK--GAYGALMDEEDEGSKFCEEDIDQILQRR 986


>gi|344279650|ref|XP_003411600.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 6-like [Loxodonta africana]
          Length = 2772

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 277/694 (39%), Positives = 389/694 (56%), Gaps = 58/694 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 371  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 430

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 431  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 490

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
             ++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 491  AERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 537

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 538  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 595

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 596  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 654

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 655  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 714

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 715  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 774

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD+   +F  +
Sbjct: 775  L---AKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAS--DFQLQ 829

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 830  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 887

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 888  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 947

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEE 1240
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+
Sbjct: 948  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVED 1007

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            L     G  G  M E +   +    D++Q  ++R
Sbjct: 1008 LLRK--GAYGALMDEEDEGSKFCEEDIDQILQRR 1039


>gi|19421557|gb|AAK56405.1| chromodomain helicase DNA binding protein 5 [Homo sapiens]
          Length = 2713

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 379/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 316  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 375

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 376  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 435

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 436  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 482

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 483  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 540

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 541  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 599

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 600  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 659

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 660  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 719

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 720  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 774

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 775  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 832

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 833  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 892

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 893  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 952

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 953  LLRKGA 958


>gi|332858468|ref|XP_001148310.2| PREDICTED: chromodomain-helicase-DNA-binding protein 6 isoform 6 [Pan
            troglodytes]
 gi|410208168|gb|JAA01303.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
 gi|410252212|gb|JAA14073.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
 gi|410297958|gb|JAA27579.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
 gi|410350331|gb|JAA41769.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
          Length = 2715

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 379/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 378  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 722  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 834

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 835  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 894

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 895  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 954

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 955  LLRKGA 960


>gi|226290256|gb|EEH45740.1| chromodomain helicase hrp3 [Paracoccidioides brasiliensis Pb18]
          Length = 1521

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 267/665 (40%), Positives = 379/665 (56%), Gaps = 84/665 (12%)

Query: 613  EFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVI----------------N 655
            EF +KW GKS+ H +W   ES       R+LENY  K  +  I                N
Sbjct: 306  EFYIKWQGKSHYHATWETVESLASCRGVRRLENYIRKTLSQAIQYMRDPEVIPEEKEKWN 365

Query: 656  ICDER-------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
            +  ER       +K  +RVI  R   DG  + +VKW  L YD CTWE    PA       
Sbjct: 366  LDRERDVDAIEDYKLAERVIGSREI-DGETQYYVKWKRLFYDSCTWE----PA------- 413

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQ--------------PEELKGG 754
                      +L  + ++ E+ R    C    I    E               P  +  G
Sbjct: 414  ----------SLVSEIAQREIDRYLDRCSHPPISNKMESNPATRAPFEPIHGTPSYVMNG 463

Query: 755  ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPL 814
             L   Q++ +N++   W + +NV+LADEMGLGKTV   AFIS L      + P +V+VPL
Sbjct: 464  ELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFISWLRHVRNQQGPFIVVVPL 523

Query: 815  STMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTT 874
            STMP+W   F  W P+LN V Y+G   +R II+ YE        ++      KF+VLLTT
Sbjct: 524  STMPSWAETFDNWTPDLNYVVYNGNEVSRNIIKDYELL------MDGNVRRPKFHVLLTT 577

Query: 875  YEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGE 934
            YE +L D++ L  + W+ + VDE HRLKN  S+L+S L  F    R+L+TGTP+QNN+GE
Sbjct: 578  YEYVLVDATFLSQIKWQFMAVDEAHRLKNRDSQLYSRLVEFKSPSRLLITGTPVQNNLGE 637

Query: 935  MYNLLNFLQPASFPSLSSFEEKFNDLT---TTQKVEELKKLVAPHMLRRLKKDAMQNIPP 991
            +  L++FL P     L   ++   DL+    + K+ EL K + P+MLRR K     ++PP
Sbjct: 638  LSALMDFLNPG----LIQIDDDM-DLSCEAASVKLAELTKSIQPYMLRRTKSKVESDLPP 692

Query: 992  KTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG 1051
            K+E+++ VELS +Q EYY+ +LTKNY  L    KG  +QS+LNI+M+L+K  NHP++ P 
Sbjct: 693  KSEKIIRVELSDVQLEYYKNILTKNYAALNQGSKG-QKQSLLNIMMELKKASNHPFMFPN 751

Query: 1052 TEP-----DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDY 1106
             E       +G  E +  + I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DY
Sbjct: 752  AESRILEGKTGREEMMRAI-ITSSGKMMLLDQLLAKLRKDGHRVLIFSQMVRMLDILADY 810

Query: 1107 LNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVII 1165
            +++      Y+R+DG+++ G R+ +I  FN  D + F FLLSTR+ GLGINL TADTV++
Sbjct: 811  MDVR--GYAYQRLDGTIAAGPRRLSIEHFNAPDSNDFAFLLSTRAGGLGINLMTADTVVL 868

Query: 1166 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG 1225
            +DSD+NP AD+QAM RAHRIGQ+K + VYRLV + +VEE +L+ A+ KL+L+ + + +  
Sbjct: 869  FDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGV 928

Query: 1226 SQKEV 1230
            + KE 
Sbjct: 929  TDKEA 933


>gi|29244924|ref|NP_115597.3| chromodomain-helicase-DNA-binding protein 6 [Homo sapiens]
 gi|296439466|sp|Q8TD26.4|CHD6_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 6;
            Short=CHD-6; AltName: Full=ATP-dependent helicase CHD6;
            AltName: Full=Radiation-induced gene B protein
 gi|119596381|gb|EAW75975.1| chromodomain helicase DNA binding protein 6, isoform CRA_b [Homo
            sapiens]
 gi|225000154|gb|AAI72397.1| Chromodomain helicase DNA binding protein 6 [synthetic construct]
          Length = 2715

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 379/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 378  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 722  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 834

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 835  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 894

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 895  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 954

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 955  LLRKGA 960


>gi|383422127|gb|AFH34277.1| chromodomain-helicase-DNA-binding protein 6 [Macaca mulatta]
          Length = 2716

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 379/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 378  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 722  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 834

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 835  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 894

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 895  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 954

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 955  LLRKGA 960


>gi|343168810|ref|NP_001230229.1| chromodomain helicase DNA binding protein 6 [Bos taurus]
          Length = 2721

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 277/694 (39%), Positives = 390/694 (56%), Gaps = 58/694 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 378  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 722  L---SKGANQHNMPNLINTMMELRKCCNHPYLISGAEEKILEDFRKTHSPD--APDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 834

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 835  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 894

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEE 1240
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+
Sbjct: 895  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVED 954

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            L     G  G  M E +   +    D++Q  ++R
Sbjct: 955  LLRK--GAYGALMDEEDEGSKFCEEDIDQILQRR 986


>gi|403290683|ref|XP_003936439.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Saimiri
            boliviensis boliviensis]
          Length = 2716

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/665 (41%), Positives = 379/665 (56%), Gaps = 64/665 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 378  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 722  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 834

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 835  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 894

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 895  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 954

Query: 1233 ILRWG 1237
            +LR G
Sbjct: 955  LLRKG 959


>gi|355784481|gb|EHH65332.1| Chromodomain-helicase-DNA-binding protein 6 [Macaca fascicularis]
          Length = 2716

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 379/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 378  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 722  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 834

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 835  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 894

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 895  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 954

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 955  LLRKGA 960


>gi|426391703|ref|XP_004062207.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Gorilla
            gorilla gorilla]
          Length = 2715

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 379/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 378  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 722  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 834

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 835  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 894

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 895  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 954

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 955  LLRKGA 960


>gi|380817104|gb|AFE80426.1| chromodomain-helicase-DNA-binding protein 6 [Macaca mulatta]
          Length = 2716

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 379/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 378  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 722  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 834

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 835  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 894

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 895  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 954

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 955  LLRKGA 960


>gi|225682812|gb|EEH21096.1| chromodomain helicase hrp1 [Paracoccidioides brasiliensis Pb03]
          Length = 1521

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 267/665 (40%), Positives = 379/665 (56%), Gaps = 84/665 (12%)

Query: 613  EFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVI----------------N 655
            EF +KW GKS+ H +W   ES       R+LENY  K  +  I                N
Sbjct: 306  EFYIKWQGKSHYHATWETVESLASCRGVRRLENYIRKTLSQAIQYMRDPEVIPEEKEKWN 365

Query: 656  ICDER-------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
            +  ER       +K  +RVI  R   DG  + +VKW  L YD CTWE    PA       
Sbjct: 366  LDRERDVDAIEDYKLAERVIGSREI-DGETQYYVKWKRLFYDSCTWE----PA------- 413

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQ--------------PEELKGG 754
                      +L  + ++ E+ R    C    I    E               P  +  G
Sbjct: 414  ----------SLVSEIAQREIDRYLDRCSHPPISNKMESNPATRAPFEPIHGTPSYVMNG 463

Query: 755  ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPL 814
             L   Q++ +N++   W + +NV+LADEMGLGKTV   AFIS L      + P +V+VPL
Sbjct: 464  ELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFISWLRHVRNQQGPFIVVVPL 523

Query: 815  STMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTT 874
            STMP+W   F  W P+LN V Y+G   +R II+ YE        ++      KF+VLLTT
Sbjct: 524  STMPSWAETFDNWTPDLNYVVYNGNEVSRNIIKDYELL------MDGNVRRPKFHVLLTT 577

Query: 875  YEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGE 934
            YE +L D++ L  + W+ + VDE HRLKN  S+L+S L  F    R+L+TGTP+QNN+GE
Sbjct: 578  YEYVLVDATFLSQIKWQFMAVDEAHRLKNRDSQLYSRLVEFKSPSRLLITGTPVQNNLGE 637

Query: 935  MYNLLNFLQPASFPSLSSFEEKFNDLT---TTQKVEELKKLVAPHMLRRLKKDAMQNIPP 991
            +  L++FL P     L   ++   DL+    + K+ EL K + P+MLRR K     ++PP
Sbjct: 638  LSALMDFLNPG----LIQIDDDM-DLSCEAASVKLAELTKSIQPYMLRRTKSKVESDLPP 692

Query: 992  KTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG 1051
            K+E+++ VELS +Q EYY+ +LTKNY  L    KG  +QS+LNI+M+L+K  NHP++ P 
Sbjct: 693  KSEKIIRVELSDVQLEYYKNILTKNYAALNQGSKG-QKQSLLNIMMELKKASNHPFMFPN 751

Query: 1052 TEP-----DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDY 1106
             E       +G  E +  + I +S K+ LL  +L  L K+GHRVLIFSQM ++LDIL DY
Sbjct: 752  AESRILEGKTGREEMMRAI-ITSSGKMMLLDQLLAKLRKDGHRVLIFSQMVRMLDILADY 810

Query: 1107 LNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVII 1165
            +++      Y+R+DG+++ G R+ +I  FN  D + F FLLSTR+ GLGINL TADTV++
Sbjct: 811  MDVR--GYAYQRLDGTIAAGPRRLSIEHFNAPDSNDFAFLLSTRAGGLGINLMTADTVVL 868

Query: 1166 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG 1225
            +DSD+NP AD+QAM RAHRIGQ+K + VYRLV + +VEE +L+ A+ KL+L+ + + +  
Sbjct: 869  FDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGV 928

Query: 1226 SQKEV 1230
            + KE 
Sbjct: 929  TDKEA 933


>gi|397511162|ref|XP_003825948.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Pan paniscus]
          Length = 2715

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 379/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 378  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 722  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 834

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 835  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 894

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 895  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 954

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 955  LLRKGA 960


>gi|74209142|dbj|BAE24963.1| unnamed protein product [Mus musculus]
          Length = 1733

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 276/692 (39%), Positives = 389/692 (56%), Gaps = 54/692 (7%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 316  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYIEI 375

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L +  E + 
Sbjct: 376  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQILPEVKH 435

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L    E      L  +QLE +NWL   W+  KN IL
Sbjct: 436  VERPAS---------DAWQK----LETSREYRNSNRLREYQLEGMNWLLFNWYNRKNCIL 482

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ + AF+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 483  ADEMGLGKTIQSIAFLSEIFVR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 540

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 541  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 599

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 600  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 659

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 660  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 719

Query: 1020 LRNIGKGVAQQSM---LNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMR 1066
            L    KG  Q +M   +N +M+LRK CNHPYLI G E            S + +F  +  
Sbjct: 720  L---TKGANQHNMPNLINTMMELRKCCNHPYLINGAEERILEDFRKAHSSEASDFQLQAM 776

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVG 1126
            I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V   
Sbjct: 777  IQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQR--RYTYERIDGRVRGN 834

Query: 1127 DRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1185
             RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRI
Sbjct: 835  LRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 894

Query: 1186 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEELF 1242
            GQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+L 
Sbjct: 895  GQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLL 954

Query: 1243 NDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
                G  G  M E +   +    D++Q  ++R
Sbjct: 955  RK--GAYGALMDEEDEGSKFCEEDIDQILQRR 984


>gi|242767903|ref|XP_002341462.1| chromodomain helicase (Chd1), putative [Talaromyces stipitatus ATCC
            10500]
 gi|218724658|gb|EED24075.1| chromodomain helicase (Chd1), putative [Talaromyces stipitatus ATCC
            10500]
          Length = 1499

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 283/700 (40%), Positives = 401/700 (57%), Gaps = 85/700 (12%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK-RKLENY---KAKYGTTVINICD------ERW-- 661
            + +KW  +S+ H +W     LK  +  R+LENY   K K    + N  D      E+W  
Sbjct: 286  YYIKWQDQSHYHATWESSDDLKYHSGFRRLENYFKNKVKTDLYLNNDPDVAPEEKEKWNL 345

Query: 662  ------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK--------LDEPA 701
                        K+ +R+I  R   +GT E FVKW  L YD CTWE         +DE  
Sbjct: 346  DRERDIESLEDYKKVERIIGHREGPEGT-EYFVKWKRLNYDSCTWESDSLIKDIAIDE-- 402

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQL 761
            L+K+    D  V  +++ ++        P+ +     S  V +T  P  L+ G L   Q+
Sbjct: 403  LDKFLDRNDKVVTCDKREMQ--------PKTR-----SPHVPITGSPSFLQNGQLKDFQV 449

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
            + LN+L   W +++NV+LADEMGLGKTV   AF++ L        P +V+VPLST+P+W 
Sbjct: 450  KGLNFLAYNWSRNQNVVLADEMGLGKTVQTIAFMNWLRHIRIQDGPFIVVVPLSTIPSWS 509

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
              F  W P++N V Y G + AR II+ YE      D   +K    KFNVLLTT+E    D
Sbjct: 510  ETFDYWTPDVNYVVYTGSSAARQIIKDYELMK---DGNPRKP---KFNVLLTTFEYANMD 563

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
               LR  PW+ + VDE HRLKN  S L++ L  F    R+L+TGTP+QNN+ E+  L++F
Sbjct: 564  FDFLRQFPWQFMAVDEAHRLKNRESNLYANLLDFRSPARLLITGTPIQNNLAELSALMDF 623

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKL---VAPHMLRRLKKDAMQNIPPKTERMVP 998
            L P     L   E    DL++    E+L KL   + P MLRR K     ++PPKTE+++ 
Sbjct: 624  LNPG----LVEVEVDM-DLSSEAASEKLAKLQNTLKPLMLRRTKSKVETDLPPKTEKIIR 678

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--S 1056
            VELS +Q EYY+ +LTKNY  L N G    +QS+LNI+M+L+K  NHP++ P  E     
Sbjct: 679  VELSDVQLEYYKNILTKNYAAL-NEGANGQKQSLLNIMMELKKASNHPFMFPNAEAKLLE 737

Query: 1057 GSV--EFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPK 1114
            G+   E L  + I +S K+ LL  +L  L ++GHRVLIFSQM K+LDIL DY+   F   
Sbjct: 738  GNTRREDLLRIMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYM--RFRGY 795

Query: 1115 TYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPH 1173
             Y+R+DG++S  +R+ A+  FN  D S F FLLSTR+ GLGINL TADTVI++DSD+NP 
Sbjct: 796  QYQRLDGTISATNRRVAMEHFNAPDSSDFAFLLSTRAGGLGINLMTADTVILFDSDWNPQ 855

Query: 1174 ADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            AD+QAM RAHRIGQ+K + VYRLV + ++EE +L+ A+ KLML+ + + +  ++K+V   
Sbjct: 856  ADLQAMARAHRIGQTKPVSVYRLVSKDTIEEEVLERARNKLMLEFITIQRGLTEKDV--- 912

Query: 1234 LRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRK 1273
                        PG + + +GE  T  +E  R L+++ +K
Sbjct: 913  -----------LPGKHNRSVGE-PTGTDEISRILKRRGQK 940


>gi|119596384|gb|EAW75978.1| chromodomain helicase DNA binding protein 6, isoform CRA_e [Homo
            sapiens]
          Length = 2731

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 379/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 353  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 412

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 413  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 472

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 473  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 519

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 520  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 577

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 578  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 636

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 637  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 696

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 697  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 756

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 757  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 811

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 812  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 869

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 870  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 929

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 930  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 989

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 990  LLRKGA 995


>gi|194760843|ref|XP_001962642.1| GF14337 [Drosophila ananassae]
 gi|190616339|gb|EDV31863.1| GF14337 [Drosophila ananassae]
          Length = 1891

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 276/685 (40%), Positives = 391/685 (57%), Gaps = 75/685 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPES---QLKVLAKRKLENYKAK-----------------YGTT 652
            +FL+KW G S IHN+W  E+   ++K    +KL+N+  K                 Y   
Sbjct: 365  QFLIKWKGWSYIHNTWESETTLREMKAKGMKKLDNFIKKEQDLTYWRRYAGPEDIDYFEC 424

Query: 653  VINICDERWKQPQRV--ISLRSSK--DGTREAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
             + +  E  K    V  I  + SK  DGT E   KW  LPY E TWE      + K+   
Sbjct: 425  QLELQQELLKSYNNVDRIIAKGSKPDDGTEEYLCKWQSLPYAESTWEDA-ALVMRKWQRC 483

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG-ALFPHQLEA 763
             + F   ER+  K   S          C+    + +   L  QPE L  G  L  +Q++ 
Sbjct: 484  AEQFS--ERECSKCTPSRH--------CRVLKYRPKFSRLKNQPEFLSAGLTLRDYQMDG 533

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LNWL   W K  +VILADEMGLGKT+    F+ SL+       P L +VPLSTM  W  E
Sbjct: 534  LNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKVHHLYGPFLCVVPLSTMTAWQRE 593

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F LWAP++NVV Y G  K+R +I+QYEW       L       KFN +LTTYE++L D  
Sbjct: 594  FNLWAPDMNVVTYLGDIKSRELIQQYEWQFEGSKRL-------KFNCILTTYEIVLKDKQ 646

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+F+ 
Sbjct: 647  FLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIM 706

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            P  F +  +FE +  +    +    L + + P++LRR+KKD  +++P K E+++ VE++S
Sbjct: 707  PEKFDTWENFELQHGN-AEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTS 765

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLH 1063
            +Q +YY+ +LTKN+  LR  GK  +  + LNIV++L+K CNH  LI  +E +   ++   
Sbjct: 766  LQKQYYKWILTKNFDALRK-GKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDE 824

Query: 1064 EMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
             ++  +K S KL LL  +L  L + GHRVLIFSQM ++LD+L DYL     P  ++R+DG
Sbjct: 825  ALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFP--FQRLDG 882

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            S+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA  
Sbjct: 883  SIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQA 942

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSG---- 1225
            RAHRIGQ  ++ +YRLV   SVEE+I++ AK+K++LD L +           +KSG    
Sbjct: 943  RAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHS 1002

Query: 1226 ------SQKEVEDILRWGTEELFND 1244
                  ++ ++  IL++G EELF D
Sbjct: 1003 SNSNPFNKDDLSAILKFGAEELFKD 1027


>gi|149733277|ref|XP_001502820.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Equus
            caballus]
          Length = 2717

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 277/694 (39%), Positives = 390/694 (56%), Gaps = 58/694 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 316  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 375

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 376  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 435

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 436  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 482

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 483  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 540

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 541  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 599

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 600  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 659

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 660  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 719

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 720  L---SKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 774

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 775  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 832

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 833  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 892

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEE 1240
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+
Sbjct: 893  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVED 952

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            L     G  G  M E +   +    D++Q  ++R
Sbjct: 953  LLRK--GAYGALMDEEDEGSKFCEEDIDQILQRR 984


>gi|426242043|ref|XP_004014888.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 6 [Ovis aries]
          Length = 2691

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 277/694 (39%), Positives = 390/694 (56%), Gaps = 58/694 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 316  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 375

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 376  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 435

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 436  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 482

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 483  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 540

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 541  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 599

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 600  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 659

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 660  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 719

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 720  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 774

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 775  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 832

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 833  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 892

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEE 1240
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+
Sbjct: 893  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVED 952

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            L     G  G  M E +   +    D++Q  ++R
Sbjct: 953  LLRK--GAYGALMDEEDEGSKFCEEDIDQILQRR 984


>gi|344237002|gb|EGV93105.1| Chromodomain-helicase-DNA-binding protein 6 [Cricetulus griseus]
          Length = 2031

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 275/692 (39%), Positives = 388/692 (56%), Gaps = 54/692 (7%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 315  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYIEI 374

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L +  E + 
Sbjct: 375  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQILPEVKH 434

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L    E      L  +QLE +NWL   W+  KN IL
Sbjct: 435  VERPAS---------DAWQK----LETSREYKNSNRLREYQLEGMNWLLFNWYNRKNCIL 481

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 482  ADEMGLGKTIQSITFLSEIFVR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 539

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 540  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 598

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 599  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 658

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 659  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 718

Query: 1020 LRNIGKGVAQQSM---LNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMR 1066
            L    KG  Q +M   +N +M+LRK CNHPYLI G E            S + +F  +  
Sbjct: 719  L---TKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAM 775

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVG 1126
            I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V   
Sbjct: 776  IQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQR--RYTYERIDGRVRGN 833

Query: 1127 DRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1185
             RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRI
Sbjct: 834  LRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 893

Query: 1186 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEELF 1242
            GQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+L 
Sbjct: 894  GQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLL 953

Query: 1243 NDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
                G  G  M E +   +    D++Q  ++R
Sbjct: 954  RK--GAYGALMDEEDEGSKFCEEDIDQILQRR 983


>gi|119495934|ref|XP_001264742.1| chromodomain helicase (Chd1), putative [Neosartorya fischeri NRRL
            181]
 gi|119412904|gb|EAW22845.1| chromodomain helicase (Chd1), putative [Neosartorya fischeri NRRL
            181]
          Length = 1523

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/653 (39%), Positives = 374/653 (57%), Gaps = 49/653 (7%)

Query: 611  SYEFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVI-------------- 654
            S+EF +KW  KS+ H +W     L       R+++NY  K  +  +              
Sbjct: 287  SFEFYIKWQEKSHYHATWETYKSLIDNCRGTRRVDNYIRKVLSEELRMNHDGDALPEERE 346

Query: 655  --NICDER-------WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKY 705
              N+  ER       +KQ +RVI++R   +GT E  VKW  L YD CTWE  +    E  
Sbjct: 347  KWNLDRERDVEAIEDYKQVERVIAMRDGDEGT-EYLVKWKRLFYDSCTWES-ESLVSEIA 404

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALN 765
                D F+         D +E           +     +   P  L+ G L   Q++ +N
Sbjct: 405  QREVDRFLDRSSHPPSSDKTE------MNPATRKPFEPIKGTPSFLQNGELKDFQVKGVN 458

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            ++   W K++NV+LADEMGLGKTV   AFI+ L    + + P +V+VPLSTMP+W   F 
Sbjct: 459  FMAFNWVKNRNVVLADEMGLGKTVQTVAFIAWLRHVRRQQGPFIVVVPLSTMPSWAETFD 518

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             W+P+LN V Y+G   AR +++ YE        ++      KFNVLLTTYE +L DS+ L
Sbjct: 519  NWSPDLNYVVYNGNEAARTMLKDYELM------IDGNPRRAKFNVLLTTYEYVLQDSTFL 572

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
                W+ + VDE HRLKN  S+L+  L  F    R+L+TGTP+QNN+ E+  L++FL P 
Sbjct: 573  SQFKWQFMAVDEAHRLKNRDSQLYQKLLEFRSPARLLITGTPIQNNLAELSALMDFLNPG 632

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
                    +   N    +QK+  L   + P+MLRR K     ++PPKTE+++ VELS +Q
Sbjct: 633  VID--VDVDMDLNAEAASQKLAALTNAIQPYMLRRTKSKVESDLPPKTEKIIRVELSDVQ 690

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFLH 1063
             EYY+ +LTKNY  L +  +G  +QS+LNI+M+L+K  NHP++ P  E     GS     
Sbjct: 691  LEYYKNILTKNYAALNDGAQG-QKQSLLNIMMELKKASNHPFMFPNAEAKILEGSTRRED 749

Query: 1064 EMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
             +R  I +S K+ LL  +L  L ++GHRVLIFSQM K+LD+L DY+  E    +Y+R+DG
Sbjct: 750  VLRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGDYM--ESRGYSYQRLDG 807

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            ++    R+ AI  FN    S F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QAM 
Sbjct: 808  TIPAASRRLAIEHFNAPGSSDFCFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMA 867

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            RAHRIGQ++ + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  +I
Sbjct: 868  RAHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEASEI 920


>gi|170031684|ref|XP_001843714.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus]
 gi|167870885|gb|EDS34268.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus]
          Length = 2039

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 284/723 (39%), Positives = 410/723 (56%), Gaps = 84/723 (11%)

Query: 582  VGKKTS---GSVAKRVQE---PAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLK 635
            VG+K++   G+    V+E   P    S +   +    ++L+KW G S +H +W  E  LK
Sbjct: 406  VGRKSATGAGTTCYSVEESGDPNEGFSERADSENAEQQYLIKWTGWSYLHCTWESEETLK 465

Query: 636  ---VLAKRKLENY-----------KAKYGTTVINI--CDER--------WKQPQRVISLR 671
               V   +KLENY           K + G   I+   C +         +   +RVI+  
Sbjct: 466  EQRVKGMKKLENYIKREHDIAFWRKHQAGPEDIDYYECQQELQHDLLKSYYNVERVIAQV 525

Query: 672  SSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQ-FERQTLKKDASEDELP 730
               +G  +   KW  LPY + TWE               L V+ +ER+  +    ED   
Sbjct: 526  EKPEGGLDYLCKWESLPYADSTWED------------ASLIVKKWERKVEEFREREDSRR 573

Query: 731  RGKGDCQ----QSEIVALTEQPEEL---KGGALFPHQLEALNWLRKCWHKSKNVILADEM 783
                 C+    + +   L  QP+ L   +G  L  +Q++ LNWL   W K  +VILADEM
Sbjct: 574  TPSKHCKAIRSRPKFHHLKAQPDYLGVDRGLKLRDYQMDGLNWLILTWCKENSVILADEM 633

Query: 784  GLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKAR 843
            GLGKT+    F+  L+   +   P L +VPLSTM  W  EFA+WAP +NVV Y G   +R
Sbjct: 634  GLGKTIQTICFLYYLFKAQQLYGPFLCVVPLSTMTAWQREFAIWAPEMNVVTYLGDVPSR 693

Query: 844  AIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKN 903
             IIRQYEW  S     N+K    KFN +LTTYE++L D + L  + W  L+VDE HRLKN
Sbjct: 694  EIIRQYEWCFS-----NQK---LKFNAILTTYEILLKDKTFLGSISWAALLVDEAHRLKN 745

Query: 904  SGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTT 963
              S L+  L  F   +R+L+TGTPLQN++ E++ LL+F+ P  F S  +F+  + + T  
Sbjct: 746  DDSLLYKALKEFDTNYRLLITGTPLQNSLKELWALLHFIMPDRFESWDAFDRLYGNTTND 805

Query: 964  QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNI 1023
            +   +L K + P++LRR+KKD  +++P K E+++ VE++SIQ +YYR +LTKN+  LR  
Sbjct: 806  KSYCKLHKELEPYILRRIKKDVEKSLPAKVEQILRVEMTSIQRQYYRWILTKNFDALRKG 865

Query: 1024 GKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSV--EFLHEMRIKASAKLTLLHSMLK 1081
             KG +  + LNIV++L+K CNH  L   TE ++ +   E + ++ +K S KL LL  +L 
Sbjct: 866  MKG-SINTFLNIVIELKKCCNHALLTRPTEFETQTNQDEVVVQL-LKGSGKLVLLDKLLC 923

Query: 1082 VLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR 1141
             L + GHRVLIFSQM ++LDIL +YL       +++R+DGS+    R+ A+  FN + S 
Sbjct: 924  RLKETGHRVLIFSQMVRMLDILAEYLQKRHF--SFQRLDGSIKGELRKQALDHFNAEGST 981

Query: 1142 -FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRA 1200
             F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA  RAHRIGQ  ++ +YRLV   
Sbjct: 982  DFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTAK 1041

Query: 1201 SVEERILQLAKKKLMLDQLFV-----------NKSGS--------QKEVEDILRWGTEEL 1241
            SVEE I++ AKKK++LD L +           +K+G+        + E+  IL++G EEL
Sbjct: 1042 SVEEDIVERAKKKMVLDHLVIQRMDTTGRTVLDKNGANNTANPFNKDELSAILKFGAEEL 1101

Query: 1242 FND 1244
            F +
Sbjct: 1102 FKE 1104


>gi|395752329|ref|XP_002830358.2| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Pongo abelii]
          Length = 2424

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 379/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 378  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 722  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 834

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 835  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 894

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 895  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 954

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 955  LLRKGA 960


>gi|341883025|gb|EGT38960.1| CBN-TAG-192 protein [Caenorhabditis brenneri]
          Length = 2968

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 271/685 (39%), Positives = 401/685 (58%), Gaps = 44/685 (6%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDERWKQP----Q 665
            +FL+KW G++  H  W    +L  + KR   K++ +KAK   + I+  DE +        
Sbjct: 1048 QFLIKWKGRAYCHCEWKTFPELLEIDKRVEAKIKRFKAKKLVSYID-DDEDFNADFVIVD 1106

Query: 666  RVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDAS 725
            RV+   +  DG     +KW  L Y+E TWE ++    +K        V+  RQ    D +
Sbjct: 1107 RVVDHITEDDGQEFVLIKWKSLGYEEVTWEPIENIPADK--------VELWRQRQVIDPA 1158

Query: 726  EDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGL 785
            +    R K   +  E   L+       G +L  +Q E ++WL  C++ S+N ILADEMGL
Sbjct: 1159 KI---RDKQRPEPEEWKKLSTSKVWKNGNSLREYQFEGVDWLLYCYYNSQNCILADEMGL 1215

Query: 786  GKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAI 845
            GKTV    F+S +Y ++    P LV+VPLST+ NW+ EF  W  ++N + YHG A AR +
Sbjct: 1216 GKTVQTITFLSRVY-DYGIHGPFLVVVPLSTIQNWVREFETWT-DMNAIVYHGSAHAREV 1273

Query: 846  IRQYE--WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKN 903
            ++QYE  +        N K +  K + L+TT+E +++D   L+ +PW V V+DE HRLKN
Sbjct: 1274 LQQYEVFYDKRHCGAKNWKKNFVKIDALITTFETVVSDVEFLKKIPWRVCVIDEAHRLKN 1333

Query: 904  SGSKLF-SLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTT 962
               KL  + L +F  +HRVLLTGTPLQNNI E+++LLNFL P  F + ++F E+F    T
Sbjct: 1334 RNCKLLVNGLLAFRMEHRVLLTGTPLQNNIEELFSLLNFLHPQQFDNSATFLEQFGSCQT 1393

Query: 963  TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN 1022
              +V++L++++ P MLRRLK+D  +++ PK E ++ V+LS +Q ++YRA+L +N+    +
Sbjct: 1394 DDQVQKLQEILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAILERNFS---H 1450

Query: 1023 IGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE-----------PDSGSVEFLHEMRIKASA 1071
            + KG +  S++N++M+LRK CNHP+LI G E           PD        +  ++AS 
Sbjct: 1451 LCKGTSAPSLMNVMMELRKCCNHPFLINGAEETIMNDFRLAHPDWDEETLTQKALVQASG 1510

Query: 1072 KLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAA 1131
            K+ L+  +L  L K+GH+VLIFSQM K+LD+LE++L     P  +ER+DG+V    RQAA
Sbjct: 1511 KVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLITMAYP--FERIDGNVRGDLRQAA 1568

Query: 1132 ITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKR 1190
            I RF+++ S RFVFLL TR+ GLGINL  ADTVII+DSD+NP  D+QA  R HRIGQ K 
Sbjct: 1569 IDRFSKENSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKL 1628

Query: 1191 LLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQK-EVEDILRWGTEELFNDSPGIN 1249
            + VYRL+   + E  +   A  KL LD+  +  + S K E   + +   EEL     G  
Sbjct: 1629 VKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTSLKSEGTALSKKDVEELLKK--GAY 1686

Query: 1250 GKDMGENNTSIEEAVRDLEQKHRKR 1274
            G  M E+N S +    D+E   ++R
Sbjct: 1687 GSIMDEDNDSAKFNEEDIETILQRR 1711


>gi|291409634|ref|XP_002721122.1| PREDICTED: chromodomain helicase DNA binding protein 6 [Oryctolagus
            cuniculus]
          Length = 2717

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 277/694 (39%), Positives = 390/694 (56%), Gaps = 58/694 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 316  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 375

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 376  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 435

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 436  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 482

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 483  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 540

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 541  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 599

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 600  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 659

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 660  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 719

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 720  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 774

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 775  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 832

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 833  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 892

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEE 1240
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+
Sbjct: 893  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKVEVED 952

Query: 1241 LFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            L     G  G  M E +   +    D++Q  ++R
Sbjct: 953  LLRK--GAYGALMDEEDEGSKFCEEDIDQILQRR 984


>gi|390462609|ref|XP_002806815.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 6 [Callithrix jacchus]
          Length = 2714

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 379/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 378  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGIFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 722  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 834

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 835  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 894

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 895  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 954

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 955  LLRKGA 960


>gi|324500342|gb|ADY40163.1| Chromodomain-helicase-DNA-binding protein 8, partial [Ascaris suum]
          Length = 1811

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 269/667 (40%), Positives = 388/667 (58%), Gaps = 46/667 (6%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDERWKQPQRVIS- 669
            + VK+  K+ IH  W  + +L+   KR   KL+ +  K   +     DE++     ++  
Sbjct: 944  YFVKYKNKAYIHCEWKTQEELEAGDKRAAAKLKRFLHKRAHSSDQDDDEQFNSDFVIVER 1003

Query: 670  -LRSSKDGT-REAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASED 727
             L  S DG  + A VKW  LPY++ TWEK+D    EK               LK   + D
Sbjct: 1004 VLDVSDDGDDKYALVKWRSLPYEDATWEKIDIIPSEKID------------ALKARNTVD 1051

Query: 728  EL---PRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
             L   PR +     SE   + E+        L  +Q E +NWL  C++  +N ILADEMG
Sbjct: 1052 SLKMKPRPRPSA--SEWRKIPEETTFKDDNTLRGYQFEGVNWLLYCYYNRQNCILADEMG 1109

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKTV    F+  +Y ++    P L++VPLST+ NW  EF  W  ++N + YHG A +R 
Sbjct: 1110 LGKTVQTICFLQRVY-DYGIHGPFLIVVPLSTIHNWQREFETWT-DMNAIIYHGSAASRQ 1167

Query: 845  IIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNS 904
            +I+Q E++    D    K +  KF+ L+TT+EM++ D   LR + + V V+DE HRLKN 
Sbjct: 1168 LIQQSEFYYRPDDQKISKKNVVKFDALITTFEMVVCDCDILRRINYHVCVIDEAHRLKNR 1227

Query: 905  GSKLFSL-LNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTT 963
              KL +  L SF+ +HR+LLTGTPLQNNI E+Y+LLNFL+P  F S S+F E+F    T 
Sbjct: 1228 NCKLLTGGLLSFTVEHRLLLTGTPLQNNIEELYSLLNFLEPEQFHSSSAFLEQFGQCQTE 1287

Query: 964  QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNI 1023
             +V++L++++ P MLRRLK+D  + + PK E ++ ++LS+ Q +YYRA+L +N+    ++
Sbjct: 1288 DQVQKLQEILKPMMLRRLKEDVEKTLQPKEETIIEIQLSNTQKKYYRAILERNFS---HL 1344

Query: 1024 GKGVAQQSMLNIVMQLRKVCNHPYLIPGTE-----------PDSGSVEFLHEMRIKASAK 1072
             KG +  S++N +M+LRK CNHP+LI G E           PD    E      +++S K
Sbjct: 1345 CKGTSVPSLMNTMMELRKCCNHPFLINGAEEQIISEMKTVHPDWSEEELYQHALVQSSGK 1404

Query: 1073 LTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAI 1132
            L L+  +L  L  +GH+VLIFSQM ++LDI+E++L ++    T+ER+DG+V    RQ AI
Sbjct: 1405 LVLIAKLLPKLRADGHKVLIFSQMVRVLDIIEEFLVVQN--YTFERIDGNVRGDLRQTAI 1462

Query: 1133 TRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRL 1191
             RF+ +D  RFVFLL TR+ GLGINL  ADTVII+DSD+NP  D+QA  R HRIGQ+K +
Sbjct: 1463 DRFSKKDSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQTKMV 1522

Query: 1192 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDIL-RWGTEELFNDSPGING 1250
             VYRL+   + E  +   A  KL LD+  +  + + K+    L R   EEL     G  G
Sbjct: 1523 KVYRLITCNTYEREMFDKASLKLGLDKAVLQSTTALKDTSQQLSRKEVEELLKK--GAYG 1580

Query: 1251 KDMGENN 1257
              M ENN
Sbjct: 1581 AIMEENN 1587


>gi|324499657|gb|ADY39859.1| Chromodomain-helicase-DNA-binding protein 8 [Ascaris suum]
          Length = 2707

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 268/667 (40%), Positives = 389/667 (58%), Gaps = 46/667 (6%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDERWKQPQRVIS- 669
            + VK+  K+ IH  W  + +L+   KR   KL+ +  K   +     DE++     ++  
Sbjct: 980  YFVKYKNKAYIHCEWKTQEELEAGDKRAAAKLKRFLHKRAHSSDQDDDEQFNSDFVIVER 1039

Query: 670  -LRSSKDGT-REAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASED 727
             L  S DG  + A VKW  LPY++ TWEK+D    EK               LK   + D
Sbjct: 1040 VLDVSDDGDDKYALVKWRSLPYEDATWEKIDIIPSEKID------------ALKARNTVD 1087

Query: 728  EL---PRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
             L   PR +     SE   + E+        L  +Q E +NWL  C++  +N ILADEMG
Sbjct: 1088 SLKMKPRPRPSA--SEWRKIPEETTFKDDNTLRGYQFEGVNWLLYCYYNRQNCILADEMG 1145

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKTV    F+  +Y ++    P L++VPLST+ NW  EF  W  ++N + YHG A +R 
Sbjct: 1146 LGKTVQTICFLQRVY-DYGIHGPFLIVVPLSTIHNWQREFETWT-DMNAIIYHGSAASRQ 1203

Query: 845  IIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNS 904
            +I+Q E++    D    K +  KF+ L+TT+EM++ D   LR + + V V+DE HRLKN 
Sbjct: 1204 LIQQSEFYYRPDDQKISKKNVVKFDALITTFEMVVCDCDILRRINYHVCVIDEAHRLKNR 1263

Query: 905  GSKLFSL-LNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTT 963
              KL +  L SF+ +HR+LLTGTPLQNNI E+Y+LLNFL+P  F S S+F E+F    T 
Sbjct: 1264 NCKLLTGGLLSFTVEHRLLLTGTPLQNNIEELYSLLNFLEPEQFHSSSAFLEQFGQCQTE 1323

Query: 964  QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNI 1023
             +V++L++++ P MLRRLK+D  + + PK E ++ ++LS+ Q +YYRA+L +N+    ++
Sbjct: 1324 DQVQKLQEILKPMMLRRLKEDVEKTLQPKEETIIEIQLSNTQKKYYRAILERNFS---HL 1380

Query: 1024 GKGVAQQSMLNIVMQLRKVCNHPYLIPGTE-----------PDSGSVEFLHEMRIKASAK 1072
             KG +  S++N +M+LRK CNHP+LI G E           PD    E      +++S K
Sbjct: 1381 CKGTSVPSLMNTMMELRKCCNHPFLINGAEEQIISEMKTVHPDWSEEELYQHALVQSSGK 1440

Query: 1073 LTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAI 1132
            L L+  +L  L  +GH+VLIFSQM ++LDI+E++L ++    T+ER+DG+V    RQ AI
Sbjct: 1441 LVLIAKLLPKLRADGHKVLIFSQMVRVLDIIEEFLVVQN--YTFERIDGNVRGDLRQTAI 1498

Query: 1133 TRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRL 1191
             RF+ +D  RFVFLL TR+ GLGINL  ADTVII+DSD+NP  D+QA  R HRIGQ+K +
Sbjct: 1499 DRFSKKDSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQTKMV 1558

Query: 1192 LVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEV-EDILRWGTEELFNDSPGING 1250
             VYRL+   + E  +   A  KL LD+  +  + + K+  + + R   EEL     G  G
Sbjct: 1559 KVYRLITCNTYEREMFDKASLKLGLDKAVLQSTTALKDTSQQLSRKEVEELLKK--GAYG 1616

Query: 1251 KDMGENN 1257
              M ENN
Sbjct: 1617 AIMEENN 1623


>gi|402882510|ref|XP_003904783.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Papio anubis]
          Length = 2716

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 273/666 (40%), Positives = 379/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L +  E + 
Sbjct: 378  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQILPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 722  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 834

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 835  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 894

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 895  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 954

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 955  LLRKGA 960


>gi|432914383|ref|XP_004079085.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 8-like [Oryzias latipes]
          Length = 2583

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 281/702 (40%), Positives = 394/702 (56%), Gaps = 67/702 (9%)

Query: 588  GSVAKRVQEPAVTESAQVKGKAV-SYEFLVKWVGKSNIHNSWIPESQLKVLAK--RKLEN 644
             ++  +V    +T+   V G+   + EF VK+   S +H  W    QL+   +  +K++ 
Sbjct: 750  AAIVDKVLSMRITKKEVVPGQYTNAEEFFVKYKNYSYLHCEWATLEQLEKDKRIHQKIKR 809

Query: 645  YKAKYGTTVINIC-DERWKQPQRV-------ISLRSSKDGTREA---FVKWTGLPYDECT 693
            +KAK+         DE    P  V       +S    KD         VKW  LPY++ T
Sbjct: 810  FKAKHAQMRHFFQEDEEPFNPDYVEVDRILDVSHSVDKDNGEPVIYYLVKWCSLPYEDAT 869

Query: 694  WE---KLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEE 750
            WE    +DE  ++++S + +      RQ   K       PR       S    L E  E 
Sbjct: 870  WELKEDVDEGKVKEFSRIHN------RQPCLK-----RTPRPPA----SSWKKLEETREY 914

Query: 751  LKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLV 810
              G  L  +QLE +NWL   W+  +N ILADEMGLGKT+ + A +S +Y     + P LV
Sbjct: 915  KNGNILREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEVYTA-GIQGPFLV 973

Query: 811  LVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNV 870
            + PLST+ NW  EF  W   +N + YHG   +R +I+QYE +  D D  +    +YKF+ 
Sbjct: 974  IAPLSTITNWEREFCTWT-QMNAIVYHGSLASRQMIQQYEMYCKD-DKGHLIPGAYKFDA 1031

Query: 871  LLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQN 930
            L+TT+EM+L+D   LR + W  +++DE HRLKN   KL   L     +H+VLLTGTPLQN
Sbjct: 1032 LITTFEMVLSDCPELREISWRCVIIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQN 1091

Query: 931  NIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
             + E+++LL+FL+PA FPS   F   F DL T ++V++L+ ++ P MLRRLK+D  +N+ 
Sbjct: 1092 TVEELFSLLHFLEPAQFPSEIEFLRDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLA 1151

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQ--SMLNIVMQLRKVCNHPYL 1048
            PK E ++ VEL+ +Q +YYRA+L +N+  L ++G        ++LN +M+LRK CNHPYL
Sbjct: 1152 PKQETIIEVELTDVQKKYYRAILERNFSFL-SLGANSNSNVPNLLNTMMELRKCCNHPYL 1210

Query: 1049 IPGTEP----------DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTK 1098
            I G E           D  + +F  +  I+++ KL LL  +L  L   GH+VLIFSQM +
Sbjct: 1211 INGAEEKIVAELREVYDPLAPDFHLQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVR 1270

Query: 1099 LLDILEDYL-NIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGIN 1156
             LDILEDYL N  +    YER+DG V    RQAAI RF++ D  RFVFLL TR+ GLGIN
Sbjct: 1271 CLDILEDYLINKRY---LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGIN 1327

Query: 1157 LATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLML 1216
            L  ADT +I+DSD+NP  D+QA  R HRIGQSK + VYRL+ R S E  +L  A  KL L
Sbjct: 1328 LTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGL 1387

Query: 1217 DQLFV---------NKSG-----SQKEVEDILRWGTEELFND 1244
            D+  +         N +G     S+KE+ED+LR G      D
Sbjct: 1388 DRAVLQSMSGNKESNNNGQIQQFSKKEIEDLLRKGAYAAIMD 1429


>gi|449269639|gb|EMC80396.1| Chromodomain-helicase-DNA-binding protein 6, partial [Columba livia]
          Length = 2622

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 299/799 (37%), Positives = 426/799 (53%), Gaps = 90/799 (11%)

Query: 533  DESAVSTEDLGERNDKMVV-----EDADVSLRDNEGLTVSEIHITCESTDKDVDVGKKTS 587
            +ESA S +    R+ + V      ED D  + D++G T++ +     S          ++
Sbjct: 138  EESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSA--------LSA 189

Query: 588  GSVAKRVQEPA---------------VTESAQVKGKAVSYE-FLVKWVGKSNIHNSWIPE 631
             ++A + +EP                V + A   G A   E F VK+   S +H  W   
Sbjct: 190  STLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGLAFEMEEFYVKYRNFSYLHCKWATL 249

Query: 632  SQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ-----RVISLRSSKDG-----T 677
             +L+   +  +K++ ++ K      +    DE    P      R++ +  +KD       
Sbjct: 250  EELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEV 309

Query: 678  REAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ 737
                VKW  LPY+E TWE  ++    K      L +  E + +++ AS         D  
Sbjct: 310  THYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHMERPAS---------DSW 360

Query: 738  QSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISS 797
            Q     L +  E      L  +QLE +NWL   W+  KN ILADEMGLGKT+ +  F+S 
Sbjct: 361  QK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSE 416

Query: 798  LYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPD 857
            ++       P L++ PLST+ NW  EF  W   +N + YHG   +R +I+QYE    D  
Sbjct: 417  IFL-MGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQ 474

Query: 858  NLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSF 917
              N     +KF V++TT+EMILAD   L+ + W  +V+DE HRLKN   KL   L   + 
Sbjct: 475  G-NPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMAL 533

Query: 918  QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHM 977
            +H+VLLTGTPLQN++ E+++LLNFL+P  FPS ++F E+F DL T ++V++L+ ++ P M
Sbjct: 534  EHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMM 593

Query: 978  LRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIV- 1036
            LRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  L    KG  Q +M N++ 
Sbjct: 594  LRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL---SKGANQHNMPNLIN 650

Query: 1037 --MQLRKVCNHPYLIPGTE------------PDSGSVEFLHEMRIKASAKLTLLHSMLKV 1082
              M+LRK CNHPYLI G E            P+  + +F  +  I+A+ KL L+  +L  
Sbjct: 651  TMMELRKCCNHPYLINGAEEKILEDFRKTHSPE--APDFQLQAMIQAAGKLVLIDKLLPK 708

Query: 1083 LYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRF-NQDKSR 1141
            L   GH+VLIFSQM + LDILEDYL       TYER+DG V    RQAAI RF   D  R
Sbjct: 709  LIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVRGNLRQAAIDRFCKPDSDR 766

Query: 1142 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRAS 1201
            FVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQSK + VYRL+ R S
Sbjct: 767  FVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNS 826

Query: 1202 VEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWG---TEELFNDSPGINGKDMGE 1255
             E  +   A  KL LD+     +N+ GS   V  + +WG    E+L     G  G  M E
Sbjct: 827  YEREMFDKASLKLGLDKAVLQDINRKGSTNGVGWLSQWGWMEVEDLLRK--GAYGALMDE 884

Query: 1256 NNTSIEEAVRDLEQKHRKR 1274
             +   +    D++Q  ++R
Sbjct: 885  EDEGSKFCEEDIDQILQRR 903


>gi|363741430|ref|XP_003642493.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Gallus
            gallus]
          Length = 2696

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 273/667 (40%), Positives = 376/667 (56%), Gaps = 64/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ--- 665
            EF VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P    
Sbjct: 310  EFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVE 369

Query: 666  --RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
              R++ +  +KD           VKW  LPY+E TWE  ++    K      L +  E +
Sbjct: 370  VDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPVKIKEFEALQIPPEIK 429

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             +++ ASE                 L +  E      L  +QLE +NWL   W+  KN I
Sbjct: 430  HMERPASES-------------WQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCI 476

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG
Sbjct: 477  LADEMGLGKTIQSITFLSEIFL-MGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHG 534

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R +I+QYE    D    N     +KF V++TT+EMILAD   L+ + W  +V+DE 
Sbjct: 535  SQISRQMIQQYEMVYRDTQG-NPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEA 593

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P  FPS ++F E+F 
Sbjct: 594  HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFG 653

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 654  DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS 713

Query: 1019 ILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLH 1063
             L    KG  Q +M N++   M+LRK CNHPYLI G E            P+  + +F  
Sbjct: 714  FL---SKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPE--APDFQL 768

Query: 1064 EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
            +  I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V
Sbjct: 769  QAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRV 826

Query: 1124 SVGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
                RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R 
Sbjct: 827  RGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 886

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVE 1231
            HRIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVE
Sbjct: 887  HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVE 946

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 947  DLLRKGA 953


>gi|449304982|gb|EMD00989.1| hypothetical protein BAUCODRAFT_192112 [Baudoinia compniacensis UAMH
            10762]
          Length = 1310

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/656 (39%), Positives = 378/656 (57%), Gaps = 66/656 (10%)

Query: 616  VKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKYGTTVINICD---------ERW---- 661
            +KW  +++ H +W P + L      R+LENY  K     +++           E+W    
Sbjct: 19   IKWQYQAHYHATWEPWATLSAYKGFRRLENYFRKTVKVELSLKQDPDVAAEDREKWNLDR 78

Query: 662  ----------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK------LDEPALEKY 705
                      +  +RVI  R  ++G  + +VKW GL YD CTWE+      L +  +++Y
Sbjct: 79   ESYLDSLNDFRHVERVIG-RREEEGVTQYYVKWKGLFYDSCTWEEESLVSELAQKEIDRY 137

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALN 765
                      +R T    ++     R      +++      QPE +KGG L   Q+  LN
Sbjct: 138  ---------LDRSTHLPQSNH----REANLATRTDYKPFRTQPEYIKGGELREFQIHGLN 184

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            +L   W K  NVILADEMGLGKTV   +F+  L  +   + P +V+VPLSTMP W   F 
Sbjct: 185  FLAHHWCKGNNVILADEMGLGKTVQTVSFMDWLRHDRGQQGPFIVVVPLSTMPAWADTFN 244

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             W P++N V Y G   AR IIR+YE        +N      KFNVLLTTYE ILADS  L
Sbjct: 245  NWTPDINYVVYSGNETARKIIREYELL------VNGNPRKVKFNVLLTTYEYILADSGFL 298

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
              + W+ + VDE HRLKN  S+L++ L  F    R+L+TGTP+QN + E+  L++FL P 
Sbjct: 299  SQLKWQFMAVDEAHRLKNRESQLYAKLMDFGAPSRLLITGTPMQNTLSELSALMDFLMPG 358

Query: 946  SFPSLSSFEEKFNDLTT---TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
                  +      DLT+   ++K+ EL   ++P+M+RR K+    ++PPKTE+++ VELS
Sbjct: 359  RINVDLNI-----DLTSEDASKKIAELTDAISPYMIRRTKQKVEHDLPPKTEKIIRVELS 413

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL 1062
             +Q EYY+ +LT+NY  L N G    + S+LNI+M+L+K  NHP++ P  E      +  
Sbjct: 414  DVQLEYYKNILTRNYAAL-NAGSKAQKTSLLNIMMELKKASNHPFMFPNAEERFLDGKDS 472

Query: 1063 HEMRIKA----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
             E ++KA    S K+ +L  +L    +EGHRVLIFSQM K+LDIL DYL +      ++R
Sbjct: 473  REDQLKALVSTSGKMIVLDRLLAKFKQEGHRVLIFSQMVKMLDILGDYLQLR--GHQFQR 530

Query: 1119 VDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DG+++ G R+ AI  FN  +S+ F FLLSTR+ GLGINL TADTVI++DSD+NP AD+Q
Sbjct: 531  LDGTIAAGARRLAIDHFNAPESQDFCFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQ 590

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            AM RAHRIGQ K + +YR V + +VEE +L+ A+ KLML+ + + +  + K+  ++
Sbjct: 591  AMARAHRIGQKKPVTIYRFVSKDTVEEEVLERARNKLMLEYITIQRGVTDKDAREL 646


>gi|327263233|ref|XP_003216425.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Anolis
            carolinensis]
          Length = 1803

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 277/683 (40%), Positives = 395/683 (57%), Gaps = 75/683 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 317  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 376

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE     A +  S 
Sbjct: 377  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQSR 436

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLEAL 764
            + + F + + +T             K   Q+   VAL +QP  + G     L  +QL  L
Sbjct: 437  IDEYFSRNQSKTTP-------FKECKVLKQRPRFVALKKQPSYIGGQESLELRDYQLNGL 489

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  E 
Sbjct: 490  NWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREI 549

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WAP +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D S 
Sbjct: 550  QTWAPQMNAVVYLGDITSRNVIRMHEW-------MHPQTKRLKFNILLTTYEILLKDKSF 602

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+ P
Sbjct: 603  LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP 662

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S++
Sbjct: 663  EKFSSWEDFEEEHGKGREV-GYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL 721

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHE 1064
            Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI    PD    EF ++
Sbjct: 722  QKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLI--KPPDDN--EFYNK 776

Query: 1065 MR-----IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
                   I++S KL LL  +L  L + G RVLIFSQM ++LDIL +YL     P  ++R+
Sbjct: 777  QEALQNLIRSSGKLILLDKLLIRLRERGSRVLIFSQMVRMLDILAEYLKYRQFP--FQRL 834

Query: 1120 DGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA
Sbjct: 835  DGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQA 894

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS-- 1226
              RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS  
Sbjct: 895  QARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAP 954

Query: 1227 -------QKEVEDILRWGTEELF 1242
                   ++E+  IL++G EELF
Sbjct: 955  SSSTPFNKEELSAILKFGAEELF 977


>gi|328772764|gb|EGF82802.1| hypothetical protein BATDEDRAFT_9456, partial [Batrachochytrium
            dendrobatidis JAM81]
          Length = 1238

 Score =  458 bits (1178), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 271/681 (39%), Positives = 382/681 (56%), Gaps = 64/681 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVL--------AKRKLEN---YKAKYGTTV-------I 654
            +FLVKW G S+ HNSW   S+L+          A+RK E+   ++   G +        I
Sbjct: 9    QFLVKWRGLSHRHNSWHLYSELRNYKGFRKVENARRKAEDEDAFRNHPGASPDEIEQMDI 68

Query: 655  NICDER-----WKQPQRVISLRSSKDGT----REAFVKWTGLPYDECTWEKLDEPALEKY 705
             +  ER     +K  +RVI++R S  G      E   KW  L Y ECTWE  D    E  
Sbjct: 69   VLELERGLLQDYKVIERVIAIRESDSGAGLSGSEYLCKWGRLSYAECTWEPADSLLPEDQ 128

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALN 765
              +     +    T+      D   R + D +        +QP  L GG L  +QL  +N
Sbjct: 129  PEIDSFLERNSSSTVPH--KNDTFQRVRTDYK-----PFQKQPSYLVGGELRDYQLLGVN 181

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            W+   WH+++N ILADEMGLGKT+ + +F+S L+       P LV+VPLST+  W  EF 
Sbjct: 182  WMAHLWHRNRNGILADEMGLGKTIQSISFLSYLFHSQHVYGPFLVVVPLSTIGAWQKEFK 241

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             WAP++NV+ YHG   +R  IR YE+          K    +FNVLLTT+E+IL D  HL
Sbjct: 242  QWAPDINVICYHGDTASRQTIRNYEFFIPS----KTKEPRIRFNVLLTTFELILKDKEHL 297

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
              + W  L VDE HRLKNS S+L   L  FS  +R+L+TGTPLQN + E+  L+ FL P 
Sbjct: 298  GKIKWAFLAVDEAHRLKNSESQLHEALKDFSTANRLLITGTPLQNTVKELLALIQFLMPD 357

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
                   FE    D    +K+ EL+  +   MLRRLKKD  +++P K+ER++ VELS +Q
Sbjct: 358  QLQEFQDFEITVGDEEQQEKIRELQIKLKDLMLRRLKKDVEKSLPSKSERILRVELSPLQ 417

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEM 1065
             EYY+A+ TKN++ L     G  Q S+ NI M+L+K  NHPYL  G EP + S E   + 
Sbjct: 418  LEYYKAVFTKNFETLNRGTAGGKQVSLQNIAMELKKASNHPYLFDGAEPPNMSREDQLKG 477

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             I  S K+ LL  +L  L++  HRVLIFSQM ++L+IL DYL+  +   T++R+DG+   
Sbjct: 478  IIMNSGKMVLLDKLLASLHEGQHRVLIFSQMVRMLNILSDYLS--YRGYTFQRLDGTTQS 535

Query: 1126 GDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              R+ ++  FN   S  F FLLSTR+ GLG+NLATADTVI++DSD+NP  D+QA+ RAHR
Sbjct: 536  EVRKRSMEHFNAAGSTDFAFLLSTRAGGLGLNLATADTVILFDSDWNPQNDLQAIARAHR 595

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---NKSG---------------- 1225
            IGQ   + VYR + + ++EE I++ AK+K++L+   +   + SG                
Sbjct: 596  IGQKNTVNVYRFLSKDTIEEDIIERAKRKMVLEYSIIKTMDTSGEGIMSSGKSKSAGSAN 655

Query: 1226 ----SQKEVEDILRWGTEELF 1242
                S +E++ IL++G + LF
Sbjct: 656  SGNISNEELQMILKFGAQNLF 676


>gi|357612417|gb|EHJ67986.1| hypothetical protein KGM_08436 [Danaus plexippus]
          Length = 3497

 Score =  458 bits (1178), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 262/666 (39%), Positives = 382/666 (57%), Gaps = 59/666 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGT--TVINICDERWKQP--- 664
            E+ VK+   S +H  W  E +L    KR   K++ +K K      + ++ D+    P   
Sbjct: 1154 EYFVKYRNFSYLHCEWKTEEELYKGDKRIFSKIKRFKQKQAQQLNIFDLLDDEPFNPDYV 1213

Query: 665  --QRVISLRSSKDGT-----REAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQ 714
              +R++ +   +D       +   VKW  L Y++ TWE    +D   +++Y   + +  +
Sbjct: 1214 EVERILDMSEIQDPANNTVVKHYLVKWKSLQYEDSTWELEEDIDVDKIKQYKIFSAIPPK 1273

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKS 774
             E+   KK    D+       CQ      L + P    G  L P+QLE LNWL   WH +
Sbjct: 1274 -EKWKFKKRPCADQW------CQ------LKDSPLYKGGNTLRPYQLEGLNWLLFSWHNN 1320

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
            +N ILADEMGLGKT+ +  F++S++ E+  + P L++ PLST+PNW  EF  W   +NVV
Sbjct: 1321 RNCILADEMGLGKTIQSLTFVNSVW-EYGIRGPFLIIAPLSTIPNWQREFEGWT-EMNVV 1378

Query: 835  EYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
             YHG   ++++I++YE++  +      K  + KFNVL+TT+E+I+ D   L+   W + V
Sbjct: 1379 VYHGSQPSKSMIQEYEFYYKNEKGEPIKEIT-KFNVLITTFEIIVTDFQELKSFNWRLCV 1437

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            +DE HRLKN   KL   L     +HRVLL+GTPLQNN+ E+++LLNFL+P+ F S  +F 
Sbjct: 1438 IDEAHRLKNRNCKLLEGLRQLHLEHRVLLSGTPLQNNVNELFSLLNFLEPSQFSSSEAFL 1497

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
             +F  L T  +V +L+ L+ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L 
Sbjct: 1498 NEFGQLKTESEVVKLQALLKPMMLRRLKEDVEKTLAPKEETIIEVELTNIQKKYYRAILE 1557

Query: 1015 KNYQILRNIGKGVAQ-QSMLNIVMQLRKVCNHPYLIPGTE---------PDSGSVEFLHE 1064
            +N+  L+      A   +++N +M+LRK C HPYL+ G E          +    E  ++
Sbjct: 1558 RNFSFLQKGAASAANIPNLMNTMMELRKCCIHPYLLNGAEDQIQFDYKQANGEDKEAYYK 1617

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I +S K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  YER+DG + 
Sbjct: 1618 AIIHSSGKMVLVDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLVFRKYP--YERIDGRIR 1675

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQ AI RF++ D  RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  R H
Sbjct: 1676 GNLRQEAIDRFSKPDSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCH 1735

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN------------KSGSQKEVE 1231
            RIGQ K + +YRL+ R + E  +   A  KL LD+  +             K  S+KE+E
Sbjct: 1736 RIGQQKMVKIYRLICRNTYEREMFDKASLKLGLDKAILQSMNTSQGKETGLKQLSKKEIE 1795

Query: 1232 DILRWG 1237
            D+L+ G
Sbjct: 1796 DLLKKG 1801


>gi|149636559|ref|XP_001513135.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1
            [Ornithorhynchus anatinus]
          Length = 1807

 Score =  458 bits (1178), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 278/686 (40%), Positives = 396/686 (57%), Gaps = 81/686 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 318  QYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 377

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWE------KLDEPA 701
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE      K  +P 
Sbjct: 378  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKKFQPC 437

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFP 758
            +++Y         F R   K    +D     K   Q+   VAL +QP  + G     L  
Sbjct: 438  IDEY---------FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRD 484

Query: 759  HQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
            +QL  LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ 
Sbjct: 485  YQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLT 544

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
            +W  E   WAP +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++
Sbjct: 545  SWQREIQTWAPQMNAVVYLGDVNSRNMIRTHEW-------MHLQTKRLKFNILLTTYEIL 597

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            L D + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++L
Sbjct: 598  LKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSL 657

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            L+F+ P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ 
Sbjct: 658  LHFIMPEKFASWEEFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILR 716

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDS 1056
            +E+S++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P      
Sbjct: 717  MEMSALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFY 775

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
               E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  +
Sbjct: 776  NKQEALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--F 832

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            +R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D
Sbjct: 833  QRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQND 892

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SG 1225
            +QA  RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +G
Sbjct: 893  LQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTG 952

Query: 1226 S---------QKEVEDILRWGTEELF 1242
            S         ++E+  IL++G EELF
Sbjct: 953  STPSSSTPFNKEELSAILKFGAEELF 978


>gi|432102738|gb|ELK30217.1| Chromodomain-helicase-DNA-binding protein 6 [Myotis davidii]
          Length = 2697

 Score =  458 bits (1178), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 264/631 (41%), Positives = 366/631 (58%), Gaps = 45/631 (7%)

Query: 666  RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTL 720
            R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + +
Sbjct: 357  RILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKHM 416

Query: 721  KKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILA 780
            ++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN ILA
Sbjct: 417  ERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILA 463

Query: 781  DEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCA 840
            DEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG  
Sbjct: 464  DEMGLGKTIQSITFLSEIFLR-GVHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQ 521

Query: 841  KARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
             +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE HR
Sbjct: 522  ISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 580

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F DL
Sbjct: 581  LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 640

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
             T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  L
Sbjct: 641  KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 700

Query: 1021 RNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRI 1067
                KG  Q +M N++   M+LRK CNHPYLI G E            S + +F  +  I
Sbjct: 701  T---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSSDAPDFQLQAMI 757

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V    
Sbjct: 758  QAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVRGNL 815

Query: 1128 RQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIG
Sbjct: 816  RQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 875

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEELFN 1243
            QSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+L  
Sbjct: 876  QSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLR 935

Query: 1244 DSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
               G  G  M E +   +    D++Q  ++R
Sbjct: 936  K--GAYGALMDEEDEGSKFCEEDIDQILQRR 964


>gi|194384680|dbj|BAG59500.1| unnamed protein product [Homo sapiens]
          Length = 1014

 Score =  458 bits (1178), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 273/666 (40%), Positives = 379/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 296  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 355

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 356  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 415

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 416  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 462

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 463  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 520

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 521  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 579

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 580  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 639

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 640  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 699

Query: 1020 LRNIGKGVAQQSM---LNIVMQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M   +N +M+LRK CNHPYLI G E            PD+   +F  +
Sbjct: 700  L---TKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAP--DFQLQ 754

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 755  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQR--RYTYERIDGRVR 812

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD++P  D+QA  R H
Sbjct: 813  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWDPQNDLQAQARCH 872

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 873  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 932

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 933  LLRKGA 938


>gi|348563827|ref|XP_003467708.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like isoform 1
            [Cavia porcellus]
          Length = 2716

 Score =  458 bits (1178), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 377/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 378  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P  FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPTQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 722  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 834

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 835  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 894

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN----KSG-------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +     K G       S+ EVED
Sbjct: 895  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKCGTNGVQQLSKMEVED 954

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 955  LLRKGA 960


>gi|67467805|ref|XP_649984.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica
            HM-1:IMSS]
 gi|56466523|gb|EAL44598.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
            histolytica HM-1:IMSS]
 gi|449707532|gb|EMD47179.1| chromodomain helicase-DNA-binding protein, putative [Entamoeba
            histolytica KU27]
          Length = 1247

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 285/731 (38%), Positives = 412/731 (56%), Gaps = 90/731 (12%)

Query: 616  VKWVGKSNIHNSWIPESQLKVLA------KRKLENY-KAKYGTTVINICDERWKQPQRVI 668
            VKW G S +H  WI E Q  ++       K+K++ + + K      +I      + +R+I
Sbjct: 171  VKWKGLSYLHIEWISEEQFLLIGGNVSGNKQKIKRFLQKKNNDEEKDIFPIENTEIERII 230

Query: 669  SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA-LEKYSHLTDLFVQFERQTLKKDASED 727
            S  + +  TR   VKW  LPY ECTWE +++ +  EK +       +FE+++  K +   
Sbjct: 231  SANTER--TR-YLVKWQKLPYTECTWENINDISDKEKIN-------EFEKRS--KCSIVA 278

Query: 728  ELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
             LP+      Q ++    E P    G  L  +QLE  NWL   W + K  ILADEMGLGK
Sbjct: 279  PLPK---RVWQKKV----ESPNYKHGNKLRSYQLEGHNWLVFNWCRGKGCILADEMGLGK 331

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV   +F+  LY   K + P L++VPLS + +W  E   W  ++NVV YHG    R +++
Sbjct: 332  TVQVVSFLEHLYSFQKLQGPFLIVVPLSMIEHWHREILEWT-DMNVVIYHGSKGNRQLVK 390

Query: 848  QYEWHASD------PDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRL 901
             YEW+  D      P +L       KF+VLLTTYE++++D   L  + W V VVDE HRL
Sbjct: 391  YYEWYYKDFQGKLIPGHL-------KFHVLLTTYEIVISDWEDLSKISWLVTVVDEAHRL 443

Query: 902  KNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL- 960
            KN  SKL   L +    H+VLLTGTP+QNN+GE++ LLN+++P +FPSL  F+ +FN L 
Sbjct: 444  KNKDSKLLKALCNIQTNHKVLLTGTPIQNNLGELWTLLNYIEPKTFPSLEEFDHEFNSLD 503

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
             + ++V +L++ + P  LRR+K +  ++IPPK E ++ VEL+ +Q +YYRA+  KN + L
Sbjct: 504  KSAEQVNKLQESIKPFFLRRMKNEVEKSIPPKEETIIEVELTMVQKQYYRALYEKNREFL 563

Query: 1021 RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD------SGSVEFLHEMRIKASAKLT 1074
                 G    ++ N++MQLRKVCNHPYLIPG E         GS ++ +++ I++S KL 
Sbjct: 564  NKGCVGSNVPNLQNLMMQLRKVCNHPYLIPGVEEKDTAQFPEGSPDYFNQL-IRSSGKLV 622

Query: 1075 LLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITR 1134
            LL  +L  LY + H+VLIFSQ+ K+L+I+E YL  ++    YER+DGS+   DRQ AI R
Sbjct: 623  LLDKLLPKLYADHHKVLIFSQLKKVLNIIEKYL--KYKGYFYERLDGSIKSEDRQNAIDR 680

Query: 1135 F-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            F N + +RF+FLL TR+ G GINL+ ADTVII+DSD+NP  D+QA  R HRIGQ K + V
Sbjct: 681  FMNPEMNRFIFLLCTRAGGFGINLSEADTVIIFDSDWNPQNDLQAQARCHRIGQKKEVKV 740

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSGSQKEVEDILRWGTEELF 1242
            YRLV + + E  + + A  KL LDQ  +            +  S++ +E +LR G    F
Sbjct: 741  YRLVSKNTYERYMFERASMKLGLDQAVLANITTSSDPKDKQQPSKELIESLLRNGAYGAF 800

Query: 1243 NDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWD--ENAI 1300
             D    + K   E          D+EQ   KR               S+K+VW   EN++
Sbjct: 801  KDDEESSSKFCEE----------DIEQILEKR---------------SSKVVWKGGENSL 835

Query: 1301 ARLLDRSNLQS 1311
                  +  QS
Sbjct: 836  GGSFSTATFQS 846


>gi|405975395|gb|EKC39961.1| Chromodomain-helicase-DNA-binding protein 1 [Crassostrea gigas]
          Length = 1787

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 295/723 (40%), Positives = 409/723 (56%), Gaps = 80/723 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            +FL+KW   ++IHN+W     LK   V   +KL+NY  K                 Y   
Sbjct: 347  QFLIKWKNWAHIHNTWESYKTLKEQKVHGLKKLDNYIKKQDEIREWKDQATPEDIDYFDC 406

Query: 653  VINICDERWKQP---QRVISLRSSK-----DGTREAFVKWTGLPYDECTWEKLDEPALEK 704
               +  E ++Q    +R+I+  + K     +G  +   KW GLPY ECTWE+  E    K
Sbjct: 407  QQEMVQELYQQHMHVERIIAHSNQKMANENNGYPDYLCKWEGLPYSECTWEE-GELVSRK 465

Query: 705  YSHLTDLF-VQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG----ALFPH 759
            +  L D + V+ + Q     A   +  R +      +   L  QP  L G      L  +
Sbjct: 466  FQVLVDEYNVRNKSQRTPTPAKYCKALRYR-----PKFAPLKNQPSFLGGENNQLVLRDY 520

Query: 760  QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPN 819
            QL+ +NWL   W K  +VILADEMGLGKT+    F+S LY  F+   P +++VPLST+  
Sbjct: 521  QLDGVNWLMHTWSKENSVILADEMGLGKTIQTIGFLSILYNTFQVYGPNVLVVPLSTIAA 580

Query: 820  WLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMIL 879
            W  EF LWAP +NVV Y G   +R  IR++EW  S     NK+    KFNVL+TTYE++L
Sbjct: 581  WQREFKLWAPEMNVVIYLGDISSRNKIREHEWCHSG----NKR---LKFNVLVTTYEILL 633

Query: 880  ADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLL 939
             D S L  V W  L+VDE HRLKN  S L+  L  F+  HR+L+TGTPLQN++ E++ LL
Sbjct: 634  KDKSFLGSVNWATLIVDEAHRLKNDDSLLYKTLFEFNSNHRLLITGTPLQNSLKELWALL 693

Query: 940  NFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPV 999
            +F+ P  F   + FEEK +    T  V  L K +   +LRR+KKD  +++P KTE+++ V
Sbjct: 694  HFIMPDKFYKWADFEEKHSSAQKTGFVN-LHKELESFLLRRVKKDVEKSLPAKTEQILRV 752

Query: 1000 ELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI-PGTEPDSGS 1058
            E+SSIQ +YYR +LTKNY+ L    KG    S +NI+M+L+K CNH  LI P  E  S  
Sbjct: 753  EMSSIQKQYYRWILTKNYKALSKGLKGNVS-SFVNIIMELKKCCNHSQLIRPPEEEFSDR 811

Query: 1059 VEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
            +  L    +K S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL +      Y+R
Sbjct: 812  LASL----VKGSGKLILLDKLLLRLKESGHRVLIFSQMVRMLDILAEYLQMRHF--QYQR 865

Query: 1119 VDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DGSV    R+ A+  FN + S  F FLLSTR+ GLG+NLATADTVII+DSD+NP  D+Q
Sbjct: 866  LDGSVRGDLRKQAMDHFNAEGSEDFCFLLSTRAGGLGVNLATADTVIIFDSDWNPQNDLQ 925

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS----------- 1226
            A  RAHRIGQ  ++ VYRLV + SVEE I++ AK+K++LD L + +  +           
Sbjct: 926  AQARAHRIGQKNQVSVYRLVTKNSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNRGIP 985

Query: 1227 --------QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKH-RKRGGG 1277
                    + E+  IL++G EELF +    N +D  E    I+E ++  E +   +   G
Sbjct: 986  SSNSTPFNKDELTSILKFGAEELFKE----NDEDEDEPQVDIDEILKRAETREVEENNTG 1041

Query: 1278 LGD 1280
            +GD
Sbjct: 1042 VGD 1044


>gi|146415248|ref|XP_001483594.1| hypothetical protein PGUG_04323 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1367

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 286/733 (39%), Positives = 400/733 (54%), Gaps = 101/733 (13%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKY-----------GTTVINI- 656
            + Y F +KW+   ++HN+W P   LK+    RK++NY  +Y            TT  +I 
Sbjct: 164  LDYVFRIKWLDALHLHNTWEPWLVLKLYKGFRKVDNYIKQYILLDQEIRSDPMTTNEDIE 223

Query: 657  -----------CDERWKQPQRVI-SLRSSKDGTRE--AFVKWTGLPYDECTWEKLDEPA- 701
                         E + Q +R++ S R   DG  +   F KW  L YDECTWE  +E A 
Sbjct: 224  AMDIERERRRDEQEEYTQVERIVDSERIEVDGESQLRYFCKWKRLYYDECTWENAEEIAR 283

Query: 702  -----LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE---IVALTEQPEELKG 753
                 + +Y    +L +               LP    +  Q++      L +QP  +K 
Sbjct: 284  MCPEQVTRYQQRVNLKI---------------LPSTSANYPQNQRPRFEKLVKQPLFIKN 328

Query: 754  GALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVP 813
            G L   QL  LNW+   W +++N ILADEMGLGKTV   AF+S L    +   P LV+VP
Sbjct: 329  GELRDFQLTGLNWMAFLWLRNENGILADEMGLGKTVQTIAFLSWLIYARRQNGPHLVVVP 388

Query: 814  LSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLT 873
            L T+P W   F  WAP++N + Y G  ++RA IR YE +              KFNV+LT
Sbjct: 389  LLTIPAWQETFEKWAPDVNCIYYLGNTESRATIRDYELYDG---------KKIKFNVMLT 439

Query: 874  TYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIG 933
            TYE IL D + L  + W+ L VDE HRLKN+   L+  L  F   +R+L+TGTPLQNNI 
Sbjct: 440  TYEYILKDRNELGSIKWQFLAVDEAHRLKNAELSLYESLRLFRVANRLLITGTPLQNNIK 499

Query: 934  EMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKT 993
            E+  L NFL P  F      + +  D    + ++EL++ + P++LRRLKKD  + +P KT
Sbjct: 500  ELAALCNFLLPGRFNIDQEIDFETPDAEQEKYIKELQQNIKPYILRRLKKDVEKLLPLKT 559

Query: 994  ERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE 1053
            ER++ VELS +Q +YY+ ++TKNY  L N G    Q S+LN++ +L+K  NHPYL  G E
Sbjct: 560  ERILRVELSDMQTDYYKNIITKNYSAL-NAGNSGLQISLLNVMAELKKASNHPYLFDGAE 618

Query: 1054 -------PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDY 1106
                     S + E +    I +S K+ LL  +L  L KEGHRVLIFSQM ++LDIL DY
Sbjct: 619  ERVLGTLTSSANRESVLRGMIMSSGKMVLLEQLLTRLRKEGHRVLIFSQMVRMLDILGDY 678

Query: 1107 LNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVII 1165
            L+I+     ++R+DG +    R+ +I  FN   SR FVFLLSTR+ GLGINL TADTVII
Sbjct: 679  LSIK--GYAFQRLDGGIPSSQRRISIDHFNAPDSRDFVFLLSTRAGGLGINLMTADTVII 736

Query: 1166 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN--- 1222
            +DSD+NP AD+QAM RAHRIGQ   + VYR V + ++EE IL+ A+KK++L+   ++   
Sbjct: 737  FDSDWNPQADLQAMARAHRIGQKNHVSVYRFVSKDTIEEEILERARKKMILEYAIISLGI 796

Query: 1223 -----KSGSQ---KEVEDILRWGTEELF--NDSPG-----------------INGKDMGE 1255
                 KS S+    E+  IL++G   +F  ND+                   +   D+GE
Sbjct: 797  TDPSKKSKSEPNSNELSQILKFGAGNMFKANDNQKKLEELNLDEVLNHAEDHVTTPDLGE 856

Query: 1256 NNTSIEEAVRDLE 1268
             N   EE ++  E
Sbjct: 857  LNLGSEEFLKQFE 869


>gi|348500298|ref|XP_003437710.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Oreochromis
            niloticus]
          Length = 2579

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 273/705 (38%), Positives = 395/705 (56%), Gaps = 80/705 (11%)

Query: 582  VGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKV--LAK 639
            V K  S  +AK+   P V    +        EF VK+   S +H  W  E QL+     +
Sbjct: 330  VDKIMSSRIAKKEVSPGVVIEVE--------EFFVKYKNYSYLHCEWATEQQLEKDKRIQ 381

Query: 640  RKLENYKAKYGTTVINICDER-------WKQPQRVISLRSSKD-GTREA----FVKWTGL 687
            +K++ +K K     +   D         + +  RV+ +   +D  TRE      VKW  L
Sbjct: 382  QKIKRFKMKQAQRALFFADMEEDPFNPDYVEVDRVLEVSYCEDKDTREEVVYYLVKWCSL 441

Query: 688  PYDECTWE---KLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVAL 744
            PY++ TWE    +D+  +E++  L         Q  K D+   E P        + +   
Sbjct: 442  PYEDSTWELKDDVDQSKIEEFEQL---------QAAKPDSRRVERP-------PANLWKK 485

Query: 745  TEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFK 803
             EQ  + + G +L  +QLE +NWL   W+  +N ILADEMGLGKT+ +  F+  ++    
Sbjct: 486  REQSRQYRNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIH-RIG 544

Query: 804  AKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKT 863
             K P L++ PLST+ NW  EF  W  +LNV+ YHG   +R +++QYE +  D      + 
Sbjct: 545  IKGPFLIIAPLSTIANWEREFRTWT-HLNVIVYHGSMVSRQMLQQYEMYFRDAQGRIIR- 602

Query: 864  SSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLL 923
             +Y+F  ++TT+EMIL     L  + W  +++DE HRLKN   KL       + +H+VLL
Sbjct: 603  GAYRFQAVITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMNLEHKVLL 662

Query: 924  TGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKK 983
            TGTPLQN + E+++LL+FL+PA FPS ++F ++F DL T ++V++L+ ++ P MLRRLK+
Sbjct: 663  TGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDLKTEEQVQKLQGILKPMMLRRLKE 722

Query: 984  DAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIV---MQLR 1040
            D  + + PK E ++ VEL++IQ +YYRA+L KN+  L    KG  Q +M N+V   M+LR
Sbjct: 723  DVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL---AKGAGQANMPNLVNTMMELR 779

Query: 1041 KVCNHPYLIPGTEP----------DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRV 1090
            K CNHPYLI G E              +++F  +  ++++ KL L+  +L  +   GH+V
Sbjct: 780  KCCNHPYLIKGAEEKILEDFREVHSPTALDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKV 839

Query: 1091 LIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTR 1149
            LIFSQM + LDILEDYL        YER+DG V    RQAAI RF++ D  RFVFLL TR
Sbjct: 840  LIFSQMVRCLDILEDYLIQRR--YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTR 897

Query: 1150 SCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQL 1209
            + GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ+K + VYRL+ R S E  +   
Sbjct: 898  AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDR 957

Query: 1210 AKKKLMLDQ-LFVNKSG---------------SQKEVEDILRWGT 1238
            A  KL LD+ +  + SG               S+KE+ED+LR G 
Sbjct: 958  ASLKLGLDKAVLQSMSGRDNSLGGGTGGGQQLSKKEIEDLLRRGA 1002


>gi|348563829|ref|XP_003467709.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like isoform 2
            [Cavia porcellus]
          Length = 2709

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 377/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + 
Sbjct: 378  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P  FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPTQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 722  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 834

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 835  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 894

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN----KSG-------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +     K G       S+ EVED
Sbjct: 895  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKCGTNGVQQLSKMEVED 954

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 955  LLRKGA 960


>gi|290889290|gb|ADD69942.1| chromo-helicase DNA-binding protein [Zonotrichia albicollis]
          Length = 1785

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 281/686 (40%), Positives = 398/686 (58%), Gaps = 81/686 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 300  QYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 359

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 360  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALIAKKF 416

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDC----QQSEIVALTEQPEELKGG---ALFP 758
                D +  F R   K    +D        C    Q+   VAL +QP  + G     L  
Sbjct: 417  QTCIDEY--FSRNQSKTTPFKD--------CKILKQRPRFVALKKQPSYIGGHDSLELRD 466

Query: 759  HQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
            +QL  LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ 
Sbjct: 467  YQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLT 526

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
            +W  E   WAP +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++
Sbjct: 527  SWQREIQTWAPQMNAVVYLGDITSRNMIRTHEW-------MHPQTKRLKFNILLTTYEIL 579

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            L D S L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++L
Sbjct: 580  LKDKSFLGGLNWVFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSL 639

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            L+F+ P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ 
Sbjct: 640  LHFIMPEKFSSWEDFEEEHGK-GREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILR 698

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDS 1056
            +E+S++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P      
Sbjct: 699  MEMSALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDDNEFY 757

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
               E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  +
Sbjct: 758  NKQEALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--F 814

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            +R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D
Sbjct: 815  QRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQND 874

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SG 1225
            +QA  RAHRIGQ K++ +YRLV +ASVEE IL+ AKKK++LD L + +          +G
Sbjct: 875  LQAQARAHRIGQKKQVNIYRLVTKASVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTG 934

Query: 1226 S---------QKEVEDILRWGTEELF 1242
            S         ++E+  IL++G EELF
Sbjct: 935  STPSSSTPFNKEELSAILKFGAEELF 960


>gi|449280623|gb|EMC87869.1| Chromodomain-helicase-DNA-binding protein 1, partial [Columba livia]
          Length = 1781

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 278/680 (40%), Positives = 395/680 (58%), Gaps = 69/680 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NY+ K                 Y   
Sbjct: 296  QYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYRKKDQETKRWLKNASPEDVEYYNC 355

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL     
Sbjct: 356  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALIAKKF 412

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLEAL 764
             T +   F R   K    +D     K   Q+   VAL +QP  + G     L  +QL  L
Sbjct: 413  QTRIDEYFSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGL 468

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  E 
Sbjct: 469  NWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREI 528

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WAP++N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D S 
Sbjct: 529  QTWAPHMNAVVYLGDITSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDKSF 581

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+ P
Sbjct: 582  LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP 641

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S++
Sbjct: 642  EKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL 700

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVEFL 1062
            Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E L
Sbjct: 701  QKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEAL 759

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+DGS
Sbjct: 760  QHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLDGS 816

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA  R
Sbjct: 817  IKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR 876

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS----- 1226
            AHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS     
Sbjct: 877  AHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSS 936

Query: 1227 ----QKEVEDILRWGTEELF 1242
                ++E+  IL++G EELF
Sbjct: 937  TPFNKEELSAILKFGAEELF 956


>gi|40215423|gb|AAR82736.1| SD21488p [Drosophila melanogaster]
          Length = 1645

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 276/685 (40%), Positives = 391/685 (57%), Gaps = 75/685 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            +FL+KW G S IHN+W  E+ L   K    +KL+N+  K                 Y   
Sbjct: 367  QFLIKWKGWSYIHNTWESEATLRDMKAKGMKKLDNFIKKEKEQAYWRRYAGPEDIDYFEC 426

Query: 653  VINICDERWKQPQRV--ISLRSSK--DGTREAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
             + +  E  K    V  I  + SK  DGT E   KW  LPY E TWE      L K+   
Sbjct: 427  QLELQHELLKSYNNVDRIIAKGSKPDDGTEEYLCKWQSLPYAESTWEDA-ALVLRKWQRC 485

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG-ALFPHQLEA 763
             + F   +R++ K   S          C+    + +   +  QPE L  G  L  +Q++ 
Sbjct: 486  AEQFN--DRESSKCTPSRH--------CRVIKYRPKFSRIKNQPEFLSSGLTLRDYQMDG 535

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LNWL   W K  +VILADEMGLGKT+    F+ SL+       P L +VPLSTM  W  E
Sbjct: 536  LNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAWQRE 595

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F LWAP++NVV Y G  K+R +I+QYEW       L       KFN +LTTYE++L D  
Sbjct: 596  FDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRL-------KFNCILTTYEIVLKDKQ 648

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+F+ 
Sbjct: 649  FLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIM 708

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            P  F +  +FE +  +    +    L + + P++LRR+KKD  +++P K E+++ VE++S
Sbjct: 709  PDKFDTWENFEVQHGN-AEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTS 767

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLH 1063
            +Q +YY+ +LTKN+  LR  GK  +  + LNIV++L+K CNH  LI  +E +   ++   
Sbjct: 768  LQKQYYKWILTKNFDALRK-GKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDE 826

Query: 1064 EMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
             ++  +K S KL LL  +L  L + GHRVLIFSQM ++LD+L DYL     P  ++R+DG
Sbjct: 827  ALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFP--FQRLDG 884

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            S+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA  
Sbjct: 885  SIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQA 944

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSG---- 1225
            RAHRIGQ  ++ +YRLV   SVEE+I++ AK+K++LD L +           +KSG    
Sbjct: 945  RAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHS 1004

Query: 1226 ------SQKEVEDILRWGTEELFND 1244
                  ++ ++  IL++G EELF D
Sbjct: 1005 SNSNPFNKDDLSAILKFGAEELFKD 1029


>gi|328868808|gb|EGG17186.1| chromo domain-containing protein [Dictyostelium fasciculatum]
          Length = 1716

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 278/684 (40%), Positives = 400/684 (58%), Gaps = 73/684 (10%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENY-------------KAKYGTTVINIC 657
            Y+FLVKW G ++IH++W    +L      +KL NY              ++      +I 
Sbjct: 439  YQFLVKWKGWAHIHDTWDSYDKLIPFKGNKKLINYVKTLLEQKQWRKEASREDIEQADIS 498

Query: 658  DERWKQP-------QRVISLRSSKDGTREA------FVKWTGLPYDECTWEKLDEPALEK 704
             E  +Q        +R+I+ R   D T E        VKW    Y E TWE  ++  ++ 
Sbjct: 499  RELDRQEYLEKLNVERIIAKREI-DETEEYKTGVQYLVKWWKSAYSEVTWEHPED--IKP 555

Query: 705  YSHLTDLF---VQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQL 761
            +    D +   +Q     +   +++  L +G              QP+ +  G L  +Q+
Sbjct: 556  FQGEIDRYLERIQTPLHNIGGISAKKRLDQG--------FEKFNTQPDWISAGKLRDYQM 607

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
            + LNWL   W  + NVILADEMGLGKT+   +FIS LY   +   P LV+VPLST+ NW 
Sbjct: 608  DGLNWLIHSWFNNTNVILADEMGLGKTIQTISFISYLYNVQQMSGPYLVVVPLSTIENWQ 667

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
             EFA WAP++N++ Y G A +R II++YE++        KK     FNVLLTTY+ IL D
Sbjct: 668  REFAKWAPSMNLIVYTGSAGSRDIIKEYEFYQY---QYGKK--KLNFNVLLTTYDFILKD 722

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
               L  + WE L VDE HRLKN+ S L  +L  F   +R+L+TGTPLQN++ E++NLLNF
Sbjct: 723  KQVLGSIKWEYLAVDEAHRLKNNESMLHEVLKFFKTGNRLLVTGTPLQNSMKELWNLLNF 782

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L P  F SL  F+++++DL    ++ EL   + PH+LRR+KK+  +++P KTER++ V+L
Sbjct: 783  LMPNKFHSLKDFQDQWSDLKEKDQIAELHNELKPHLLRRIKKEVEKSLPAKTERILRVDL 842

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSV 1059
            S +Q +YYR +L KN+Q L    KG  + S+LNIV++L+K CNHPYL    E +  + S+
Sbjct: 843  SPLQKKYYRLILKKNFQELNKGVKG-EKTSLLNIVVELKKTCNHPYLFESAENENYNDSL 901

Query: 1060 EFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
            + L    IK S KL LL  +L  L + GHRVLIFSQM ++LDIL  YL  +     ++R+
Sbjct: 902  DAL----IKGSGKLILLDKLLIRLKETGHRVLIFSQMVRMLDILARYL--KHRGFLFQRL 955

Query: 1120 DGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DGS+S   R  A+ RFN + S  F FLLSTR+ GLGINL+TADTV+I+DSD+NP  D+QA
Sbjct: 956  DGSMSREKRSQAMDRFNAEGSPDFCFLLSTRAGGLGINLSTADTVVIFDSDYNPQNDLQA 1015

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS------------ 1226
              RAHRIGQ   + +YRLV + +VEE IL+ AK+K++LD L +    +            
Sbjct: 1016 EARAHRIGQKNAVNIYRLVTKKTVEEDILERAKQKMVLDHLVIQSMDTKSSSSKSAGSAP 1075

Query: 1227 -----QKEVEDILRWGTEELFNDS 1245
                 ++E++ IL++G E+LF +S
Sbjct: 1076 SQVFNKEELDAILKFGAEDLFKES 1099


>gi|195398205|ref|XP_002057713.1| GJ18281 [Drosophila virilis]
 gi|194141367|gb|EDW57786.1| GJ18281 [Drosophila virilis]
          Length = 1924

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 276/689 (40%), Positives = 393/689 (57%), Gaps = 83/689 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPES---QLKVLAKRKLENYKAKYGTTVINICDERWKQPQRV-- 667
            ++L+KW G S IHN+W  E+   ++K    +KL+N+  K   T       R+  P+ +  
Sbjct: 392  QYLIKWKGWSYIHNTWESETTLREMKAKGMKKLDNFIKKEQDTAYW---RRYAGPEDIDY 448

Query: 668  --------------------ISLRSSK--DGTREAFVKWTGLPYDECTWEKLDEPALEKY 705
                                I  R +K  DG+ E   KW  LPY E TWE      L K+
Sbjct: 449  FECQLELQHDLLKSYNNVDRIIARGTKPEDGSEEFLCKWQSLPYAESTWEDA-TLVLRKW 507

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG-ALFPHQ 760
                + F   ER+  K   S          C+    + +   +  QPE L  G  L  +Q
Sbjct: 508  QRCVEQFT--ERENSKWTPSRH--------CRVIKYRPKFSRIKSQPEFLVDGLTLRDYQ 557

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            ++ LNWL   W K  +VILADEMGLGKT+    F+ SL+       P L +VPLSTM  W
Sbjct: 558  MDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAW 617

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
              EF LWAP++NVV Y G  K+R +I+QYEW       L       KFN +LTTYE++L 
Sbjct: 618  QREFDLWAPDMNVVTYLGDVKSRELIQQYEWQFEGSKRL-------KFNCILTTYEIVLK 670

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D   L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+
Sbjct: 671  DKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLH 730

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
            F+ PA F +  +FE +  +    +    L + + P++LRR+KKD  +++P K E+++ VE
Sbjct: 731  FIMPAKFDTWDNFELQHGN-AEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVE 789

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSV- 1059
            ++S+Q +YY+ +LTKN+  LR  GK  +  + LNIV++L+K CNH  LI  +E +   + 
Sbjct: 790  MTSLQKQYYKWILTKNFDALRK-GKRGSTSTFLNIVIELKKCCNHAALIRPSEFELFGLQ 848

Query: 1060 --EFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
              E L +M +K S KL LL  +L  L + GHRVLIFSQM ++LD+L DYL       +++
Sbjct: 849  QDEAL-QMLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHF--SFQ 905

Query: 1118 RVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DGS+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+
Sbjct: 906  RLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL 965

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSG 1225
            QA  RAHRIGQ  ++ +YRLV   SVEE+I++ AK+K++LD L +           +KSG
Sbjct: 966  QAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSG 1025

Query: 1226 ----------SQKEVEDILRWGTEELFND 1244
                      ++ ++  IL++G EELF D
Sbjct: 1026 NGHSSNSNPFNKDDLSAILKFGAEELFKD 1054


>gi|351704214|gb|EHB07133.1| Chromodomain-helicase-DNA-binding protein 6 [Heterocephalus glaber]
          Length = 2756

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 273/666 (40%), Positives = 377/666 (56%), Gaps = 64/666 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 374  FYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 433

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L +  E + 
Sbjct: 434  DRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQILPEIKH 493

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            + + AS         D  Q     L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 494  VDRPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 540

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 541  ADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 598

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 599  QISRQMIQQYEMVYRDTQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 657

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P  FPS ++F E+F D
Sbjct: 658  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPTQFPSETAFLEEFGD 717

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 718  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 777

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +
Sbjct: 778  LT---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQ 832

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 833  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 890

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 891  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 950

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 951  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 1010

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 1011 LLRKGA 1016


>gi|167539947|ref|XP_001741453.1| chromodomain helicase hrp1 [Entamoeba dispar SAW760]
 gi|165893990|gb|EDR22091.1| chromodomain helicase hrp1, putative [Entamoeba dispar SAW760]
          Length = 1249

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 286/732 (39%), Positives = 412/732 (56%), Gaps = 91/732 (12%)

Query: 616  VKWVGKSNIHNSWIPESQLKVLA-------KRKLENY-KAKYGTTVINICDERWKQPQRV 667
            VKW G S +H  WI E Q  +L        K+K++ + + K      +I      + +R+
Sbjct: 172  VKWKGLSYLHIEWISEEQFLLLGGGNVSGNKQKIKRFLQKKNNDEEKDIFPIENTEIERI 231

Query: 668  ISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA-LEKYSHLTDLFVQFERQTLKKDASE 726
            IS  + +  TR   VKW  LPY ECTWE +++ +  EK +       +FE+++  K +  
Sbjct: 232  ISANTER--TR-YLVKWQKLPYTECTWENVNDISDKEKIN-------EFEKRS--KCSIV 279

Query: 727  DELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLG 786
              LP+      Q ++    E P    G  L  +QLE  NWL   W + K  ILADEMGLG
Sbjct: 280  APLPK---RVWQKKV----ESPNYKHGNTLRSYQLEGHNWLVFNWCRGKGCILADEMGLG 332

Query: 787  KTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAII 846
            KTV   +F+  LY   K + P L++VPLS + +W  E   W  ++NVV YHG    R ++
Sbjct: 333  KTVQVVSFLEHLYSFQKLQGPFLIVVPLSMIEHWHREILEWT-DMNVVIYHGSKGNRQLV 391

Query: 847  RQYEWHASD------PDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
            + YEW+  D      P +L       KF+VLLTTYE++++D   L  + W V VVDE HR
Sbjct: 392  KHYEWYYKDFQGKLIPGHL-------KFHVLLTTYEIVISDWEDLSKISWLVTVVDEAHR 444

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN  SKL   L +    H+VLLTGTP+QNN+GE++ LLN+++P +F SL  F+ +FN L
Sbjct: 445  LKNKDSKLLKALCNIQTNHKVLLTGTPIQNNLGELWTLLNYIEPKTFSSLEEFDHEFNSL 504

Query: 961  -TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
              + ++V +L++ + P  LRR+K +  ++IPPK E ++ VEL+ +Q +YYRA+  KN + 
Sbjct: 505  DKSAEQVNKLQESIKPFFLRRMKNEVEKSIPPKEETIIEVELTMVQKQYYRALYEKNREF 564

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD------SGSVEFLHEMRIKASAKL 1073
            L     G    ++ N++MQLRKVCNHPYLIPG E         GS ++ +++ I++S KL
Sbjct: 565  LNKGCVGSNVPNLQNLMMQLRKVCNHPYLIPGVEEKDTAQFPEGSPDYFNQL-IRSSGKL 623

Query: 1074 TLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAIT 1133
             LL  +L  LY + H+VLIFSQ+ K+L+I+E YL  ++    YER+DGS+   DRQ AI 
Sbjct: 624  VLLDKLLPKLYADHHKVLIFSQLKKVLNIIEKYL--KYKGYFYERLDGSIKSEDRQNAID 681

Query: 1134 RF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLL 1192
            RF N + +RF+FLL TR+ G GINL+ ADTVIIYDSD+NP  D+QA  R HRIGQ K + 
Sbjct: 682  RFMNPEMNRFIFLLCTRAGGFGINLSEADTVIIYDSDWNPQNDLQAQARCHRIGQKKEVK 741

Query: 1193 VYRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSGSQKEVEDILRWGTEEL 1241
            VYRLV + + E  + + A  KL LDQ  +            +  S++ +E +LR G    
Sbjct: 742  VYRLVSKNTYERYMFERASMKLGLDQAVLANITTSSDPKDKQQPSKELIESLLRNGAYGA 801

Query: 1242 FNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWD--ENA 1299
            F D    + K   E          D+EQ   KR               S+K+VW   EN+
Sbjct: 802  FKDDEESSSKFCEE----------DIEQILEKR---------------SSKVVWKGGENS 836

Query: 1300 IARLLDRSNLQS 1311
            ++     +  QS
Sbjct: 837  LSGSFSTATFQS 848


>gi|440294401|gb|ELP87418.1| chromodomain helicase hrp1, putative [Entamoeba invadens IP1]
          Length = 1234

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 265/661 (40%), Positives = 384/661 (58%), Gaps = 58/661 (8%)

Query: 615  LVKWVGKSNIHNSWIPESQLKVL------AKRKLENYKAKYGTTVINICDERWKQPQRVI 668
            LVKW G S +H   +PE+    +       K+K++ +  K       +  + +    RVI
Sbjct: 159  LVKWRGMSYLHVDTLPENVFLTMDGNVNANKQKIKRFLQKKKEEEEEMIPQEYTTIDRVI 218

Query: 669  SLRSSKDGTREAFVKWTGLPYDECTWEKLDE------PALEKYSHLTDLFVQFERQTLKK 722
            S+  SKD TR   VKW  L Y+E TWE  +E        +E+Y    +   QF  Q LK+
Sbjct: 219  SM--SKDKTR-CLVKWQKLGYNEATWENTEEITENDGSKIEEYYRYNN--YQF-VQPLKE 272

Query: 723  DASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADE 782
                 ++                E P       L  +QLE  NW+   W K +  ILADE
Sbjct: 273  RVWNKKI----------------ESPVYKNNNTLRSYQLEGHNWMVYNWCKGRGCILADE 316

Query: 783  MGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKA 842
            MGLGKTV    F+  L+   K   P L+++PL  + +W  E + W  +LNV+ Y G  + 
Sbjct: 317  MGLGKTVQVVTFLEHLHSYQKLHGPFLIVMPLGMVEHWHREISEWT-DLNVILYSGSKEN 375

Query: 843  RAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLK 902
            R ++++YEW  +D +  NK T+  KFNV++TTYE ++AD   L+ + W V+V+DE  RLK
Sbjct: 376  RKLVKKYEWFYTDEEG-NKNTNQTKFNVMVTTYETLIADFEDLQQISWFVVVIDEAQRLK 434

Query: 903  NSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL-T 961
            N  SKL   L+S    H++LLTGTP+QNN+GE++ LLN+++P  F SL  F++ + ++  
Sbjct: 435  NKDSKLLKTLSSLKTDHKILLTGTPIQNNLGELWTLLNYIEPKKFGSLEEFDKMYGNIDN 494

Query: 962  TTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILR 1021
              ++V EL+K + P +LRR+K D  ++IPPK E ++ VEL+ +Q +YYRA+  KN + L 
Sbjct: 495  NPEQVTELQKSIKPFLLRRVKSDVEKSIPPKEETVIEVELTMVQKQYYRALYEKNREFLN 554

Query: 1022 NIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD------SGSVEFLHEMRIKASAKLTL 1075
                G    ++ N++MQLRKVCNHPYLI G E          S E+  ++ IK+S KL L
Sbjct: 555  KGCVGSNMPNLQNLMMQLRKVCNHPYLISGVEEKDTAQFAENSEEYFKQL-IKSSGKLVL 613

Query: 1076 LHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRF 1135
            L  +L  LY++ H+VLIFSQ+ K+L+I+E YL  ++    YER+DGS+   DRQ AI RF
Sbjct: 614  LDKLLPKLYEDKHKVLIFSQLKKVLNIIEKYL--KYKGYLYERLDGSIRALDRQNAIDRF 671

Query: 1136 -NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVY 1194
             N + ++FVFLL TR+ G GINL+ ADTVIIYDSD+NP  D+QA  R HRIGQ K + VY
Sbjct: 672  MNPEMNKFVFLLCTRAGGFGINLSEADTVIIYDSDWNPQNDLQAQARCHRIGQKKEVKVY 731

Query: 1195 RLVVRASVEERILQLAKKKLMLDQ-LFVNKSG----------SQKEVEDILRWGTEELFN 1243
            RLV + + E  + + A KKL LDQ +  N +           S+ E+E +L++G   +F 
Sbjct: 732  RLVSKNTYERYMFERASKKLGLDQAVLANVTSSNDSKEKTQLSKAEIESLLKYGAYGVFK 791

Query: 1244 D 1244
            D
Sbjct: 792  D 792


>gi|290889294|gb|ADD69945.1| chromo-helicase DNA-binding protein [Zonotrichia albicollis]
          Length = 1808

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 280/682 (41%), Positives = 397/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 314  QYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 373

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 374  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALIAKKF 430

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 431  QARIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHESLELRDYQLN 484

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 485  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 544

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WAP +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 545  EIQTWAPQMNAVVYLGDITSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 597

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            S L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 598  SFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 657

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 658  MPEKFSSWEDFEEEHGKGREC-GYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 716

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 717  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQE 775

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 776  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 832

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 833  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 892

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 893  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPS 952

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 953  SSTPFNKEELSAILKFGAEELF 974


>gi|328867660|gb|EGG16042.1| myb domain-containing protein [Dictyostelium fasciculatum]
          Length = 1999

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 296/768 (38%), Positives = 427/768 (55%), Gaps = 87/768 (11%)

Query: 578  KDVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQL--- 634
            K +D   K   SV K V   A  + +   G+A   E LVKW G + IH SW+  ++L   
Sbjct: 277  KSIDSRLKIEFSVEKVVD--AREQVSADSGEAKVPEALVKWHGLAFIHCSWVEIAKLSQT 334

Query: 635  ---KVLAKRKLENYKAKYGTTVI-NICDERWKQPQRVIS---LRSSKDGTREAF------ 681
               K   +R  + +  + G +    +  +   Q +R+++     S + GT  AF      
Sbjct: 335  KSGKARLQRFFKTHTIEDGVSQDEKLAYQELMQCERILTDSKAESIRKGT--AFNSTHPL 392

Query: 682  ---VKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQ 738
               VKW G  Y  CTWE  +E A +K   L D   + +  + +K+ +E E P      + 
Sbjct: 393  LYLVKWKGESYARCTWETAEELADDK--ALQDYRTRNQYPS-EKELTEKERPPASAWKES 449

Query: 739  SEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISS 797
            +E       P   K G  L P+QLE LNWL  CWH+ +N +L DEMGLGKTV + + I +
Sbjct: 450  AE------SPSYFKNGNKLRPYQLEGLNWLSFCWHQRRNSMLGDEMGLGKTVQSVSIIET 503

Query: 798  LYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPD 857
            L      + P L + PL+T+P+W  EF  W    +V+ YH    AR  IR +E+     +
Sbjct: 504  LRSVHGIRGPFLCIAPLTTIPHWKREFEAWTTQ-SVLVYHDTGDARQTIRDHEFFYPTAN 562

Query: 858  NLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSF 917
            N      + KFN L+TTYEMI++D S L  + W+ +V+DE HRLKN   +L + L ++++
Sbjct: 563  NKKNNNVT-KFNTLITTYEMIISDRSFLSKINWKYVVIDEAHRLKNKSCRLTNELRTYNY 621

Query: 918  QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHM 977
             H +LLTGTP+QNN  E+++LLNFLQP  F S   F  +F DL   ++V +L+ ++ P++
Sbjct: 622  GHLLLLTGTPIQNNTQELWSLLNFLQPEKFASCDEFLVEFGDLKQAEQVTKLQAVLKPYI 681

Query: 978  LRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVM 1037
            LRR+K++  ++I PK E +V VEL+++Q +YYRA+  KN+  LR  GKG    S+LNI+M
Sbjct: 682  LRRMKENVEKSIAPKEETIVEVELTTVQKKYYRAIYEKNFSFLRKGGKG---PSLLNIMM 738

Query: 1038 QLRKVCNHPYLIPGTE---------------PDSGSVEFLHEMRIKASAKLTLLHSMLKV 1082
            +LRK CNHPYLI G E                   + + ++E  I++S KL L+  +L  
Sbjct: 739  ELRKCCNHPYLIKGAEKSEMADLQIKNGVTAAGKSAQDAVYERLIQSSGKLVLVDKLLPK 798

Query: 1083 LYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-R 1141
            L   GH+VLIFSQM  +LDIL+DYL     P  +ER+DGS+   DRQAAI RF++  S  
Sbjct: 799  LRAGGHKVLIFSQMVMVLDILDDYLTYRGYP--HERIDGSIKGNDRQAAIDRFSKKGSDS 856

Query: 1142 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRAS 1201
            FVFLL T++ G+GINL  ADTVII+DSD+NP  D+QA  R HRIGQ K + VYRLV R +
Sbjct: 857  FVFLLCTKAGGIGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVYRLVTRNT 916

Query: 1202 VEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIE 1261
             E+ +   A KKL LD++ + K                   N+S  I  +  GE N   +
Sbjct: 917  YEKIMFDRASKKLSLDKVVLTK------------------MNNSSNIPQE--GEENPD-K 955

Query: 1262 EAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIARLLDRSNL 1309
            E +  L      R G    VY  K  EG+++  ++E+ I R+LDRS +
Sbjct: 956  ETIDSL-----LRYG----VYAIKDDEGASERFYEED-IDRILDRSTV 993


>gi|260834763|ref|XP_002612379.1| hypothetical protein BRAFLDRAFT_218963 [Branchiostoma floridae]
 gi|229297756|gb|EEN68388.1| hypothetical protein BRAFLDRAFT_218963 [Branchiostoma floridae]
          Length = 1849

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 276/666 (41%), Positives = 379/666 (56%), Gaps = 61/666 (9%)

Query: 613  EFLVKWVGKSNIHNSW--IPESQLKVLAKRKLENYKAKYGTT-VINICDERWKQPQ---- 665
            ++ VK+   S +H  W  +PE +      +K++ + AK  T  V    DE    P     
Sbjct: 2    QYYVKYKNFSYLHCEWKTVPELEKDKRIHQKIKRFWAKRATVNVFEQFDEDPFNPDYVEV 61

Query: 666  -RVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             RV+ + ++ D           VKW  LPY++ TWE    +D   LE+Y +         
Sbjct: 62   DRVLDMATNTDPNNGQPVTHYLVKWQQLPYEDSTWELEEDIDTNKLEQYHYFK------- 114

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKN 776
                +  A ED  PR + +        +T +        L  +Q+E +NWL   W+  +N
Sbjct: 115  ----QPPAPEDREPRPEPESWHQLDPNVTYK----NDNKLREYQMEGVNWLLFNWYNRRN 166

Query: 777  VILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
             ILADEMGLGKTV +  F+  +  E     P L++ PLST+ NW  EF  W  N+NVV Y
Sbjct: 167  CILADEMGLGKTVQSITFLKEIQ-EQGILGPFLIIAPLSTIANWQREFETWT-NVNVVVY 224

Query: 837  HGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVD 896
            HG + +R +I +YE    D +  N     YKF  L+TTYE+I++D   LR +PW  +++D
Sbjct: 225  HGSSASRQMIHRYEMFHRD-ELGNIIPECYKFQSLITTYEVIISDCLELRDIPWRAVIID 283

Query: 897  EGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEK 956
            E HRLKN   KL   L     +HRVLLTGTPLQNN+ E+++LLNFL+P  F S + F  +
Sbjct: 284  EAHRLKNRNCKLLEGLKILDLEHRVLLTGTPLQNNVEELFSLLNFLEPDQFDSEADFLSE 343

Query: 957  FNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKN 1016
            F DL T  +V +L+ L+ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L +N
Sbjct: 344  FGDLKTEDQVSKLQALLKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILERN 403

Query: 1017 YQIL-RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD----------SGSVEFLHEM 1065
            +  L +  G      +++N +M+LRK CNHPYLI G E                ++LH M
Sbjct: 404  FTFLAKGCGSSSNVPNLMNTMMELRKCCNHPYLINGAEEKILGEYKDQHGENHGKYLHCM 463

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             ++AS KL L+  +L  L   GH+VLIFSQM + LDILEDYL     P  YER+DG V  
Sbjct: 464  -VQASGKLVLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLVQNVYP--YERIDGRVRG 520

Query: 1126 GDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQAAI RF++ D  RFVFLL TR+ GLGINL  ADTVII+DSD+NP  D+QA  R HR
Sbjct: 521  NLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHR 580

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----NKSG-------SQKEVED 1232
            IGQSK + VYRL+ RA+ E  +   A  KL LD+  +     N SG       S+KE+E+
Sbjct: 581  IGQSKSVKVYRLLTRATYERDMFDRASLKLGLDKAVLQSMRDNVSGARETQQLSKKEIEE 640

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 641  LLRKGA 646


>gi|269969347|sp|B6ZLK2.1|CHD1_CHICK RecName: Full=Chromodomain-helicase-DNA-binding protein 1;
            Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1
 gi|218117883|dbj|BAH03306.1| chromodomain-helicase-DNA-binding protein 1 [Gallus gallus]
          Length = 1719

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 280/682 (41%), Positives = 397/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 313  QYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 372

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 373  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALIAKKF 429

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 430  QARIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHESLELRDYQLN 483

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 484  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 543

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WAP +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 544  EIQTWAPQMNAVVYLGDITSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 596

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            S L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 597  SFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 656

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 657  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 715

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 716  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQE 774

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 775  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 831

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 832  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 891

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 892  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPS 951

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 952  SSTPFNKEELSAILKFGAEELF 973


>gi|355563129|gb|EHH19691.1| Chromodomain-helicase-DNA-binding protein 6 [Macaca mulatta]
          Length = 2639

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 262/605 (43%), Positives = 356/605 (58%), Gaps = 55/605 (9%)

Query: 666  RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTL 720
            R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + +
Sbjct: 317  RILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKHV 376

Query: 721  KKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILA 780
            ++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN ILA
Sbjct: 377  ERPAS---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILA 423

Query: 781  DEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCA 840
            DEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG  
Sbjct: 424  DEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQ 481

Query: 841  KARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
             +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE HR
Sbjct: 482  ISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 540

Query: 901  LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDL 960
            LKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F DL
Sbjct: 541  LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 600

Query: 961  TTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL 1020
             T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  L
Sbjct: 601  KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 660

Query: 1021 RNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHEM 1065
                KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  + 
Sbjct: 661  T---KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQA 715

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V  
Sbjct: 716  MIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVRG 773

Query: 1126 GDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HR
Sbjct: 774  NLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHR 833

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVEDI 1233
            IGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED+
Sbjct: 834  IGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVEDL 893

Query: 1234 LRWGT 1238
            LR G 
Sbjct: 894  LRKGA 898


>gi|327283794|ref|XP_003226625.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 2-like [Anolis carolinensis]
          Length = 1863

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 279/712 (39%), Positives = 412/712 (57%), Gaps = 88/712 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPE---SQLKVLAKRKLENYKAKYGTTVINIC------DERWKQ 663
            ++L+KW G S IH++W  E    Q KV   +KLEN+K K     I  C      +  + +
Sbjct: 351  QYLIKWKGWSYIHSTWESEDSLQQQKVKGLKKLENFKKK--EEEIKQCGQSKSRNHYFFK 408

Query: 664  P------QRVISLRSSKDGTR---------------EAFVKWTGLPYDECTWEKLDEPAL 702
            P      Q V + +S+  G+                E   KW GL Y +C+WE  DE  +
Sbjct: 409  PTVKAKAQAVKTNKSATPGSEFPVHNRKVSSSSNEPEYLCKWMGLSYADCSWE--DEALI 466

Query: 703  -EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDC----QQSEIVALTEQPEELKGG--A 755
             +K+ H  D F         ++ S+    R   DC    Q+   VAL +QP  + G    
Sbjct: 467  CKKFQHCIDSFSS-------RNNSKTMPTR---DCKVLKQRPRFVALKKQPSYIGGENLE 516

Query: 756  LFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLS 815
            L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P L++VP+S
Sbjct: 517  LRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPMS 576

Query: 816  TMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTY 875
            T+ +W  E    AP +NV+ Y G   +R  IR+YEW       ++ ++   KFNVL+TTY
Sbjct: 577  TLTSWQREIESCAPEINVIVYIGDQMSRNAIREYEW-------VHAQSKRLKFNVLITTY 629

Query: 876  EMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEM 935
            E++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+
Sbjct: 630  EILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKEL 689

Query: 936  YNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTER 995
            ++LL+F+ P  F     FE++          + L K++ P +LRR+KKD  +++P K E+
Sbjct: 690  WSLLHFIMPEKFEFWEDFEDEHGK-GRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQ 748

Query: 996  MVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTE 1053
            ++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI  P   
Sbjct: 749  ILRVEMSALQKQYYKWILTRNYKALSKGTRG-STSGFLNIVMELKKCCNHCYLIKSPEEN 807

Query: 1054 PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
                + E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL I+  P
Sbjct: 808  ERENNQEMLLSL-IRSSGKLILLDKLLSRLRERGNRVLIFSQMVRMLDILAEYLTIKHYP 866

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              ++R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP
Sbjct: 867  --FQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 924

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----------- 1221
              D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +           
Sbjct: 925  QNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVL 984

Query: 1222 -NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
             N SG       +++E+  IL++G E+LF ++    G++       IEE +R
Sbjct: 985  DNNSGRTNSNPFNKEELTAILKFGAEDLFKEA---EGEESEPQEMDIEEILR 1033


>gi|226706292|sp|B0R0I6.2|CHD8_DANRE RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
            Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8
          Length = 2511

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 270/668 (40%), Positives = 382/668 (57%), Gaps = 66/668 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER-------WKQ 663
            EF VK+   S +H  W    QL+   +  +KL+ +K K    + N+  E        + +
Sbjct: 703  EFFVKYKNYSYMHCEWASLEQLERDKRIHQKLKRFKTKQAQ-MRNLFQEDEEPFNPDYVE 761

Query: 664  PQRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
              R++    S D           VKW  LPY++ TWE    +DE  +E++  +     + 
Sbjct: 762  VDRILDESHSVDKDNGEPVVYYLVKWCSLPYEDATWELKEDVDEGKVEEFRKIESRQPRL 821

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSK 775
            +R            PR      +     L E  E   G  L  +QLE +NWL   W+  +
Sbjct: 822  KRT-----------PRPAASAWKK----LDESTEYKNGNQLREYQLEGVNWLLFNWYNRQ 866

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + A +S ++     + P +++ PLST+ NW  EF+ W  ++N + 
Sbjct: 867  NCILADEMGLGKTIQSIALLSEMFSA-GVQSPFMIIAPLSTITNWEREFSNWT-DMNAIV 924

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D D  +    +YKF+ L+TT+EMIL+D   LR + W  +V+
Sbjct: 925  YHGSLASRQMIQQYEMYCKD-DKGHLIPGAYKFDALITTFEMILSDCPELREISWRCVVI 983

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+PA FPS   F  
Sbjct: 984  DEAHRLKNRNCKLLDSLKMLEIEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLR 1043

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
            +F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL+ +Q +YYRA+L +
Sbjct: 1044 EFGDLKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILER 1103

Query: 1016 NYQILRNIGKGVAQQS----MLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEF 1061
            N+  L     G  Q S    +LN +M+LRK CNHPYLI G E           D  + +F
Sbjct: 1104 NFSFL---SMGATQNSNVPNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYDPLAPDF 1160

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
              +  ++++ KL LL  +L  L   GH+VLIFSQM + LDILEDYL  +     YER+DG
Sbjct: 1161 HLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDG 1218

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT +I+DSD+NP  D+QA  
Sbjct: 1219 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQA 1278

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG---------SQKEV 1230
            R HRIGQSK + VYRL+ R S E  +L  A  KL LD+ +  + SG         S+KE+
Sbjct: 1279 RCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKESSIQQFSKKEI 1338

Query: 1231 EDILRWGT 1238
            ED+LR G 
Sbjct: 1339 EDLLRKGA 1346


>gi|320461545|ref|NP_001189381.1| chromodomain-helicase-DNA-binding protein 8 [Danio rerio]
          Length = 2549

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 271/674 (40%), Positives = 383/674 (56%), Gaps = 66/674 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER-------WKQ 663
            EF VK+   S +H  W    QL+   +  +KL+ +K K    + N+  E        + +
Sbjct: 741  EFFVKYKNYSYMHCEWASLEQLERDKRIHQKLKRFKTKQAQ-MRNLFQEDEEPFNPDYVE 799

Query: 664  PQRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
              R++    S D           VKW  LPY++ TWE    +DE  +E++  +     + 
Sbjct: 800  VDRILDESHSVDKDNGEPVVYYLVKWCSLPYEDATWELKEDVDEGKVEEFRKIESRQPRL 859

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSK 775
            +R            PR      +     L E  E   G  L  +QLE +NWL   W+  +
Sbjct: 860  KRT-----------PRPAASAWKK----LDESTEYKNGNQLREYQLEGVNWLLFNWYNRQ 904

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + A +S ++     + P +++ PLST+ NW  EF+ W  ++N + 
Sbjct: 905  NCILADEMGLGKTIQSIALLSEMFSA-GVQSPFMIIAPLSTITNWEREFSNWT-DMNAIV 962

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D D  +    +YKF+ L+TT+EMIL+D   LR + W  +V+
Sbjct: 963  YHGSLASRQMIQQYEMYCKD-DKGHLIPGAYKFDALITTFEMILSDCPELREISWRCVVI 1021

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+PA FPS   F  
Sbjct: 1022 DEAHRLKNRNCKLLDSLKMLEIEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLR 1081

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
            +F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL+ +Q +YYRA+L +
Sbjct: 1082 EFGDLKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILER 1141

Query: 1016 NYQILRNIGKGVAQQS----MLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEF 1061
            N+  L     G  Q S    +LN +M+LRK CNHPYLI G E           D  + +F
Sbjct: 1142 NFSFL---SMGATQNSNVPNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYDPLAPDF 1198

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
              +  ++++ KL LL  +L  L   GH+VLIFSQM + LDILEDYL  +     YER+DG
Sbjct: 1199 HLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDG 1256

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT +I+DSD+NP  D+QA  
Sbjct: 1257 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQA 1316

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG---------SQKEV 1230
            R HRIGQSK + VYRL+ R S E  +L  A  KL LD+ +  + SG         S+KE+
Sbjct: 1317 RCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKESSIQQFSKKEI 1376

Query: 1231 EDILRWGTEELFND 1244
            ED+LR G      D
Sbjct: 1377 EDLLRKGAYAAIMD 1390


>gi|410903295|ref|XP_003965129.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Takifugu
            rubripes]
          Length = 1689

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 268/681 (39%), Positives = 394/681 (57%), Gaps = 75/681 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAKYGTT-------------VINI 656
            ++L+KW   ++IHN+W  E  LK   V   +KL+NYK K                  +N 
Sbjct: 310  QYLIKWKNWAHIHNTWETEETLKMQNVKGMKKLDNYKKKDQEKKKWLKAASPEDIEYLNC 369

Query: 657  CDE-------RWKQPQRVI--SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
             DE       +++  +R+I  S + S  G  +   KW GL Y EC+WE     A +    
Sbjct: 370  QDELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLSYSECSWEDGGLIAKKFQKC 429

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDC----QQSEIVALTEQPEELKGG-ALFPHQLE 762
            + D   + + +T+              DC    Q+   V + +QP  +  G  L  +QL+
Sbjct: 430  IDDYMSRHQSKTIPSR-----------DCKVLKQRPRFVPMKKQPSFIDDGLELRDYQLD 478

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNW+   W K  + ILADEMGLGKT+    F++ ++ E +   P L++VPLST+ +W  
Sbjct: 479  GLNWMAHSWCKGNSCILADEMGLGKTIQTICFLNYMFNEHQLYGPFLLVVPLSTLTSWQR 538

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E  LWAP +NVV Y G   +R +IR +EW       ++  +   KFN+LLTTYE++L D 
Sbjct: 539  EIQLWAPQMNVVVYLGDISSRNMIRTHEW-------IHVHSKKMKFNILLTTYEILLKDK 591

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            S L  V W  + VDE HRLKN  S L+  +  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 592  SFLGSVNWAFIGVDEAHRLKNDDSLLYKTMMEFKSNHRLLITGTPLQNSLKELWSLLHFI 651

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+      +     L K + P +LRR+KKD  +++P K E+++ VE+S
Sbjct: 652  MPDKFHSWELFEEEHGKGRDSGYTS-LHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMS 710

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL 1062
            +IQ +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI   E D    E L
Sbjct: 711  AIQKQYYKWILTRNYKALSKGVKG-STSGFLNIMMELKKCCNHCYLIRLPEDDLNKTEAL 769

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL-NIEFGPKTYERVDG 1121
             ++ +++S KL LL  +L  L + GHRVLIFSQM ++LDIL DYL + +F    ++R+DG
Sbjct: 770  QQL-VRSSGKLVLLDKLLIRLKERGHRVLIFSQMVRMLDILADYLRSRQF---LFQRLDG 825

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            S+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA  
Sbjct: 826  SIKGEMRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQA 885

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS-------------- 1226
            RAHRIGQ +++ +YRLV + SVEE I++ AKKK++LD L + +  +              
Sbjct: 886  RAHRIGQKRQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSS 945

Query: 1227 -----QKEVEDILRWGTEELF 1242
                 ++E+  IL++G EELF
Sbjct: 946  SAPFNKEELSAILKFGAEELF 966


>gi|195470933|ref|XP_002087761.1| GE14968 [Drosophila yakuba]
 gi|194173862|gb|EDW87473.1| GE14968 [Drosophila yakuba]
          Length = 1883

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 276/685 (40%), Positives = 391/685 (57%), Gaps = 75/685 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            +FL+KW G S IHN+W  E+ L   K    +KL+N+  K                 Y   
Sbjct: 366  QFLIKWKGWSYIHNTWESEATLRDMKAKGMKKLDNFIKKEQEQAYWRRYAGPEDIDYFEC 425

Query: 653  VINICDERWKQPQRV--ISLRSSK--DGTREAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
             + +  E  K    V  I  + SK  DGT E   KW  LPY E TWE      L K+   
Sbjct: 426  QLELQHELLKSYNNVDRIIAKGSKPDDGTEEYLCKWQSLPYAESTWEDA-ALVLRKWQRC 484

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG-ALFPHQLEA 763
             + F   +R++ K   S          C+    + +   +  QPE L  G  L  +Q++ 
Sbjct: 485  AEQFN--DRESSKCTPSRH--------CRVIKYRPKFSRIKNQPEFLAAGLTLRDYQMDG 534

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LNWL   W K  +VILADEMGLGKT+    F+ SL+       P L +VPLSTM  W  E
Sbjct: 535  LNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKLHHLYGPFLCVVPLSTMTAWQRE 594

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F LWAP++NVV Y G  K+R +I+QYEW       L       KFN +LTTYE++L D  
Sbjct: 595  FDLWAPDMNVVTYLGDIKSRELIQQYEWQFEGSKRL-------KFNCILTTYEIVLKDKQ 647

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+F+ 
Sbjct: 648  FLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIM 707

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            P  F +  +FE +  +    +    L + + P++LRR+KKD  +++P K E+++ VE++S
Sbjct: 708  PDKFDTWENFEVQHGN-AEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTS 766

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLH 1063
            +Q +YY+ +LTKN+  LR  GK  +  + LNIV++L+K CNH  LI  +E +   ++   
Sbjct: 767  LQKQYYKWILTKNFDALRK-GKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDE 825

Query: 1064 EMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
             ++  +K S KL LL  +L  L + GHRVLIFSQM ++LD+L DYL     P  ++R+DG
Sbjct: 826  ALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFP--FQRLDG 883

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            S+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA  
Sbjct: 884  SIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQA 943

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSG---- 1225
            RAHRIGQ  ++ +YRLV   SVEE+I++ AK+K++LD L +           +KSG    
Sbjct: 944  RAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHS 1003

Query: 1226 ------SQKEVEDILRWGTEELFND 1244
                  ++ ++  IL++G EELF D
Sbjct: 1004 SNSNPFNKDDLSAILKFGAEELFKD 1028


>gi|431894397|gb|ELK04197.1| Chromodomain-helicase-DNA-binding protein 6 [Pteropus alecto]
          Length = 1543

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 265/632 (41%), Positives = 367/632 (58%), Gaps = 47/632 (7%)

Query: 666  RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTL 720
            R++ +  +KD           VKW  LPY+E TWE  ++    K      L V  E + +
Sbjct: 381  RILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVREFESLQVLPEIKHV 440

Query: 721  KKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILA 780
            ++ AS         D  Q     L +  E      L  +QLE +NWL   W+  KN ILA
Sbjct: 441  ERPAS---------DAWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILA 487

Query: 781  DEMGLGKTVSACAFISSLYCEFKA-KLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            DEMGLGKT+ +  F+S ++  F+    P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 488  DEMGLGKTIQSITFLSEIF--FRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 544

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 545  QISRQMIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH 603

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 604  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 663

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 664  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 723

Query: 1020 LRNIGKGVAQQSM---LNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMR 1066
            L    KG  Q +M   +N +M+LRK CNHPYLI G E            S + +F  +  
Sbjct: 724  L---TKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSSDAPDFQLQAM 780

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVG 1126
            I A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V   
Sbjct: 781  IHAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQR--RYTYERIDGRVRGN 838

Query: 1127 DRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1185
             RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRI
Sbjct: 839  LRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 898

Query: 1186 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEELF 1242
            GQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+L 
Sbjct: 899  GQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLL 958

Query: 1243 NDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
                G  G  M E +   +    D++Q  ++R
Sbjct: 959  RK--GAYGALMDEEDEGSKFCEEDIDQILQRR 988


>gi|426197234|gb|EKV47161.1| chromodomain-helicase DNA-binding protein [Agaricus bisporus var.
            bisporus H97]
          Length = 1298

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/612 (41%), Positives = 362/612 (59%), Gaps = 48/612 (7%)

Query: 659  ERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
            E ++  +R++S R   DG  E F KW GL Y+ CTWE          S       Q + +
Sbjct: 157  ENFRNVERIVSHREGADGEMEYFCKWQGLNYEHCTWE---------LSKDVKPIAQEQIE 207

Query: 719  TLKKDASEDELPRGKGDCQQSE---IVALTEQPEELK--GGALFPHQLEALNWLRKCWHK 773
              ++  +E + P       ++       + + P+ ++  GG L   QL  LNWL   W  
Sbjct: 208  AYRQREAEGKFPYKSASYLRTSRPPFTRILQDPDYIQATGGELKDFQLTGLNWLAYVWSN 267

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
              N ILADEMGLGKTV   AFIS L+ E +   P LV+VPLST+  W  +F LWAP++NV
Sbjct: 268  GDNGILADEMGLGKTVQTVAFISWLFHEMQQYGPFLVIVPLSTITAWQMQFNLWAPDINV 327

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
            + Y G A AR +IR +E+  S     NKK    K NVLLTTYE+ L D+  L  + W++L
Sbjct: 328  ITYIGTAPAREVIRTHEFGPS-----NKK---LKMNVLLTTYELTLRDAKELVDIKWQLL 379

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
             VDE HRLKNS S+L+  L  FS   ++L+TGTPLQNN+ E+ +L++FL P  F   + F
Sbjct: 380  AVDEAHRLKNSESQLYEALRCFSAASKLLITGTPLQNNVRELLSLMHFLMPDKFALTNEF 439

Query: 954  EEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAML 1013
            +   ND    +K++EL   +   MLRRLK+D + ++P K+ER++ VE+S++Q  +Y+ +L
Sbjct: 440  D--LNDADHEEKIKELHLQLESLMLRRLKRDVLTSLPTKSERILRVEMSALQTHFYKNIL 497

Query: 1014 TKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKL 1073
            TKN+  L     G    S+LNI M+L+K  NHPYL  G E  S S E   +  +  S K+
Sbjct: 498  TKNFAGLVKSANGNNNISLLNIAMELKKAANHPYLFDGAETRSDSNEETLKGLVMNSGKM 557

Query: 1074 TLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAIT 1133
             LL  +L  L ++GHRVLIFSQM ++LDIL DY+++      ++R+DG V+   R+ +I 
Sbjct: 558  VLLDKLLARLRQDGHRVLIFSQMVRMLDILSDYMSLR--GYIHQRLDGMVASEQRKKSIA 615

Query: 1134 RFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLL 1192
             FN   S  F FLLSTR+ GLGINL TA+TVII+DSD+NP  D+QAM RAHRIGQ   + 
Sbjct: 616  HFNAPGSPDFAFLLSTRAGGLGINLETANTVIIFDSDWNPQNDLQAMARAHRIGQKSHVS 675

Query: 1193 VYRLVVRASVEERILQLAKKKLMLDQLFVNKSG---------------------SQKEVE 1231
            VYR V + ++EE +L+ AKKK++L+   +N+                       S++E+ 
Sbjct: 676  VYRFVSKDTMEEDVLERAKKKMVLEYAIINQMDTSQAHLSSKPQGKDPHKPDNLSKEELT 735

Query: 1232 DILRWGTEELFN 1243
             +L++G +++F+
Sbjct: 736  AVLKYGAQKMFD 747


>gi|70995269|ref|XP_752395.1| chromodomain helicase (Chd1) [Aspergillus fumigatus Af293]
 gi|66850030|gb|EAL90357.1| chromodomain helicase (Chd1), putative [Aspergillus fumigatus Af293]
          Length = 1523

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 262/656 (39%), Positives = 373/656 (56%), Gaps = 55/656 (8%)

Query: 611  SYEFLVKWVGKSNIHNSWIPESQLKVL-----AKRKLENY--KAKYGTTVINICD----- 658
            S+EF +KW  KS+ H +W      K L       R+++NY  K  Y    +N        
Sbjct: 287  SFEFYIKWQEKSHYHATW---ETYKFLIDNCRGTRRVDNYIRKVLYEELRMNHDGDAPPE 343

Query: 659  --ERW--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPAL 702
              E+W              KQ +RVI++R   +GT E  VKW  L YD CTWE  +    
Sbjct: 344  EREKWNLDRERDVEAIEDYKQVERVIAMRDGDEGT-EYLVKWKRLFYDSCTWES-ESLVS 401

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLE 762
            E      D F+         D +E           +     +   P  L+ G L   Q++
Sbjct: 402  EIAQREVDRFLDRSSHPPLSDKTE------MNPATRKPFEPIKGTPSFLQNGELKDFQVK 455

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             +N++   W K++NV+LADEMGLGKTV   AFI+ L    + + P +V+VPLSTMP+W  
Sbjct: 456  GVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFIAWLRHVRRQQGPFIVVVPLSTMPSWAE 515

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
             F  W P+LN V Y+G   AR +++ YE        ++      KFNVLLTTYE +L DS
Sbjct: 516  TFDNWTPDLNYVVYNGNEAARTMLKDYELM------IDGNPRRAKFNVLLTTYEYVLQDS 569

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L    W+ + VDE HRLKN  S+L+  L  F    R+L+TGTP+QNN+ E+  L++FL
Sbjct: 570  TFLSQFKWQFMAVDEAHRLKNRDSQLYQKLLEFKSPARLLITGTPIQNNLAELSALMDFL 629

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P         +   N    +QK+  L   + P+MLRR K     ++PPKTE+++ VELS
Sbjct: 630  NPGVID--VDVDMDLNAEAASQKLAALTNAIQPYMLRRTKSKVESDLPPKTEKIIRVELS 687

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVE 1060
             +Q EYY+ +LTKNY  L +  +G  +QS+LNI+M+L+K  NHP++ P  E     GS  
Sbjct: 688  DVQLEYYKNILTKNYAALNDGAQG-QKQSLLNIMMELKKASNHPFMFPNAEAKILEGSTR 746

Query: 1061 FLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
                +R  I +S K+ LL  +L  L ++GHRVLIFSQM K+LD+L DY+  E    +Y+R
Sbjct: 747  REDVLRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGDYM--ESRGYSYQR 804

Query: 1119 VDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DG++    R+ AI  FN    S F FLLSTR+ GLGINL TADTVI++DSD+NP AD+Q
Sbjct: 805  LDGTIPAASRRLAIEHFNAPGSSDFCFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQ 864

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            AM RAHRIGQ++ + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  +I
Sbjct: 865  AMARAHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEASEI 920


>gi|195354288|ref|XP_002043630.1| GM15785 [Drosophila sechellia]
 gi|194127798|gb|EDW49841.1| GM15785 [Drosophila sechellia]
          Length = 1921

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/517 (47%), Positives = 344/517 (66%), Gaps = 45/517 (8%)

Query: 746  EQPEELKGGA--LFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFK 803
            +QP  L+G    L P+Q+E +NW                     TV+    + SLY E  
Sbjct: 681  DQPAFLEGTGMQLHPYQIEGINW---------------------TVT---LLYSLYKEGH 716

Query: 804  AKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ----YEWHASDPDNL 859
             + P LV VPLST+ NW  EF LWAP+   + Y G   +RA+IR+    +E  A     +
Sbjct: 717  CRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKV 776

Query: 860  NK-KTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQ 918
            ++ +T+ YKFNVLLT+YE+I  D++ L  + W VLVVDE HRLK++ SK F +LNS++  
Sbjct: 777  SRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIA 836

Query: 919  HRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHML 978
            +++LLTGTPLQNN+ E+++LLNFL    F  L +F+ +F D++  ++V+ L +++ PHML
Sbjct: 837  YKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSKEEQVKRLHEMLGPHML 896

Query: 979  RRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQ 1038
            RRLK D ++N+P K+E +V VELS++Q ++Y+ +LTKNY+ L N   G    S++NI+M 
Sbjct: 897  RRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEAL-NSKSGGGSCSLINIMMD 955

Query: 1039 LRKVCNHPYLIPG-TEPDSGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQ 1095
            L+K CNHPYL P   E  + +   L+E+    KA+ KL LL  MLK L  + HRVLIFSQ
Sbjct: 956  LKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQ 1015

Query: 1096 MTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLG 1154
            MTK+LDILED+L  E     YER+DG ++   RQ AI RFN   + +FVFLLSTR+ GLG
Sbjct: 1016 MTKMLDILEDFLEGE--QYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLG 1073

Query: 1155 INLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKL 1214
            INLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V R SVEER+ Q+AK+K+
Sbjct: 1074 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKM 1133

Query: 1215 MLDQLFV-------NKSGSQKEVEDILRWGTEELFND 1244
            ML  L V         + +++E++DILR+GTE+LF +
Sbjct: 1134 MLTHLVVRPGMGGKGANFTKQELDDILRFGTEDLFKE 1170



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSCP  YH  CL+PPL  IP+G W+CP+C+
Sbjct: 431 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 473



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 69  KGNDGYYYE---CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           +G DG +     C +C  GG ++ CD+CPR YHL CL+P L   P GKW CP C
Sbjct: 359 EGEDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 412



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 20/104 (19%)

Query: 613 EFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKY--------------GTTVI---- 654
           E+ +KW   S  H  W+PE QL V     + +++ KY                T++    
Sbjct: 513 EYFIKWHNMSYWHCEWVPEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTLLEERF 572

Query: 655 --NICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEK 696
             N     W   QRVI+ R+++DG+    VKW  LPYD+ TWE+
Sbjct: 573 YKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDKSTWEE 616


>gi|159131149|gb|EDP56262.1| chromodomain helicase (Chd1), putative [Aspergillus fumigatus A1163]
          Length = 1523

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 262/656 (39%), Positives = 373/656 (56%), Gaps = 55/656 (8%)

Query: 611  SYEFLVKWVGKSNIHNSWIPESQLKVL-----AKRKLENY--KAKYGTTVINICD----- 658
            S+EF +KW  KS+ H +W      K L       R+++NY  K  Y    +N        
Sbjct: 287  SFEFYIKWQEKSHYHATW---ETYKFLIDNCRGTRRVDNYIRKVLYEELRMNHDGDAPPE 343

Query: 659  --ERW--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPAL 702
              E+W              KQ +RVI++R   +GT E  VKW  L YD CTWE  +    
Sbjct: 344  EREKWNLDRERDVEAIEDYKQVERVIAMRDGDEGT-EYLVKWKRLFYDSCTWES-ESLVS 401

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLE 762
            E      D F+         D +E           +     +   P  L+ G L   Q++
Sbjct: 402  EIAQREVDRFLDRSSHPPLSDKTE------MNPATRKPFEPIKGTPSFLQNGELKDFQVK 455

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             +N++   W K++NV+LADEMGLGKTV   AFI+ L    + + P +V+VPLSTMP+W  
Sbjct: 456  GVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFIAWLRHVRRQQGPFIVVVPLSTMPSWAE 515

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
             F  W P+LN V Y+G   AR +++ YE        ++      KFNVLLTTYE +L DS
Sbjct: 516  TFDNWTPDLNYVVYNGNEAARTMLKDYELM------IDGNPRRAKFNVLLTTYEYVLQDS 569

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L    W+ + VDE HRLKN  S+L+  L  F    R+L+TGTP+QNN+ E+  L++FL
Sbjct: 570  TFLSQFKWQFMAVDEAHRLKNRDSQLYQKLLEFKSPARLLITGTPIQNNLAELSALMDFL 629

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P         +   N    +QK+  L   + P+MLRR K     ++PPKTE+++ VELS
Sbjct: 630  NPGVID--VDVDMDLNAEAASQKLAALTNAIQPYMLRRTKSKVESDLPPKTEKIIRVELS 687

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVE 1060
             +Q EYY+ +LTKNY  L +  +G  +QS+LNI+M+L+K  NHP++ P  E     GS  
Sbjct: 688  DVQLEYYKNILTKNYAALNDGAQG-QKQSLLNIMMELKKASNHPFMFPNAEAKILEGSTR 746

Query: 1061 FLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
                +R  I +S K+ LL  +L  L ++GHRVLIFSQM K+LD+L DY+  E    +Y+R
Sbjct: 747  REDVLRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGDYM--ESRGYSYQR 804

Query: 1119 VDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DG++    R+ AI  FN    S F FLLSTR+ GLGINL TADTVI++DSD+NP AD+Q
Sbjct: 805  LDGTIPAASRRLAIEHFNAPGSSDFCFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQ 864

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            AM RAHRIGQ++ + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  +I
Sbjct: 865  AMARAHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEASEI 920


>gi|442625623|ref|NP_001259975.1| Chromodomain-helicase-DNA-binding protein 1, isoform C [Drosophila
            melanogaster]
 gi|440213244|gb|AGB92512.1| Chromodomain-helicase-DNA-binding protein 1, isoform C [Drosophila
            melanogaster]
          Length = 1881

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 276/685 (40%), Positives = 391/685 (57%), Gaps = 75/685 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            +FL+KW G S IHN+W  E+ L   K    +KL+N+  K                 Y   
Sbjct: 367  QFLIKWKGWSYIHNTWESEATLRDMKAKGMKKLDNFIKKEKEQAYWRRYAGPEDIDYFEC 426

Query: 653  VINICDERWKQPQRV--ISLRSSK--DGTREAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
             + +  E  K    V  I  + SK  DGT E   KW  LPY E TWE      L K+   
Sbjct: 427  QLELQHELLKSYNNVDRIIAKGSKPDDGTEEYLCKWQSLPYAESTWEDA-ALVLRKWQRC 485

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG-ALFPHQLEA 763
             + F   +R++ K   S          C+    + +   +  QPE L  G  L  +Q++ 
Sbjct: 486  AEQFN--DRESSKCTPSRH--------CRVIKYRPKFSRIKNQPEFLSSGLTLRDYQMDG 535

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LNWL   W K  +VILADEMGLGKT+    F+ SL+       P L +VPLSTM  W  E
Sbjct: 536  LNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAWQRE 595

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F LWAP++NVV Y G  K+R +I+QYEW       L       KFN +LTTYE++L D  
Sbjct: 596  FDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRL-------KFNCILTTYEIVLKDKQ 648

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+F+ 
Sbjct: 649  FLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIM 708

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            P  F +  +FE +  +    +    L + + P++LRR+KKD  +++P K E+++ VE++S
Sbjct: 709  PDKFDTWENFEVQHGN-AEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTS 767

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLH 1063
            +Q +YY+ +LTKN+  LR  GK  +  + LNIV++L+K CNH  LI  +E +   ++   
Sbjct: 768  LQKQYYKWILTKNFDALRK-GKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDE 826

Query: 1064 EMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
             ++  +K S KL LL  +L  L + GHRVLIFSQM ++LD+L DYL     P  ++R+DG
Sbjct: 827  ALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFP--FQRLDG 884

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            S+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA  
Sbjct: 885  SIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQA 944

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSG---- 1225
            RAHRIGQ  ++ +YRLV   SVEE+I++ AK+K++LD L +           +KSG    
Sbjct: 945  RAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHS 1004

Query: 1226 ------SQKEVEDILRWGTEELFND 1244
                  ++ ++  IL++G EELF D
Sbjct: 1005 SNSNPFNKDDLSAILKFGAEELFKD 1029


>gi|195161920|ref|XP_002021804.1| GL26702 [Drosophila persimilis]
 gi|194103604|gb|EDW25647.1| GL26702 [Drosophila persimilis]
          Length = 1943

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 274/690 (39%), Positives = 391/690 (56%), Gaps = 81/690 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAKYGTTVINICDERWKQPQ---- 665
            ++L+KW G S IHN+W  E  L   K    +KL+N+  K   T       R+  P+    
Sbjct: 400  QYLIKWKGWSYIHNTWESERTLRDMKAKGMKKLDNFIKKEQETAYW---RRYAGPEDIDY 456

Query: 666  -------------------RVISLRSSKD-GTREAFVKWTGLPYDECTWEKLDEPALEKY 705
                               R+I+  S  D GT E   KW  LPY E TWE      L K+
Sbjct: 457  FECQQELQHELLKSYNNVDRIIAKGSKPDVGTDEFLCKWQSLPYAEATWEDATL-VLRKW 515

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG-ALFPHQ 760
                + F   +R++ K   S          C+    + +   +  QP+ L  G  L  +Q
Sbjct: 516  QRCAEQF--HDRESSKCTPSRH--------CRVLKYRPKFSRIKNQPDYLVAGLVLRDYQ 565

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            ++ LNWL   W K  +VILADEMGLGKT+    F+ SL+       P L +VPLSTM  W
Sbjct: 566  MDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKVHHLYGPFLCVVPLSTMTAW 625

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
              EF LWAP++NVV Y G  K+R +I+QYEW       L       KFN +LTTYE++L 
Sbjct: 626  QREFDLWAPDMNVVTYLGDIKSREMIQQYEWQFEGSKRL-------KFNCILTTYEIVLK 678

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D   L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+
Sbjct: 679  DKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLH 738

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
            F+ P  F +  +FE +  +    +    L + + P++LRR+KKD  +++P K E+++ VE
Sbjct: 739  FIMPEKFDTWDNFELQHGN-AEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVE 797

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            ++S+Q +YY+ +LTKN+  LR  GK  +  + LNIV++L+K CNH  LI  +E +   ++
Sbjct: 798  MTSLQKQYYKWILTKNFDALRK-GKKGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQ 856

Query: 1061 FLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
                ++  +K S KL LL  +L  L + GHRVLIFSQM ++LD+L DYL     P  ++R
Sbjct: 857  QDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFP--FQR 914

Query: 1119 VDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DGS+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+Q
Sbjct: 915  LDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 974

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSG- 1225
            A  RAHRIGQ  ++ +YRLV   SVEE+I++ AK+K++LD L +           +KSG 
Sbjct: 975  AQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGN 1034

Query: 1226 ---------SQKEVEDILRWGTEELFNDSP 1246
                     ++ ++  IL++G EELF D P
Sbjct: 1035 GHSSNSNPFNKDDLSAILKFGAEELFKDEP 1064


>gi|198473015|ref|XP_001356144.2| GA17649 [Drosophila pseudoobscura pseudoobscura]
 gi|198139261|gb|EAL33204.2| GA17649 [Drosophila pseudoobscura pseudoobscura]
          Length = 1943

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 274/690 (39%), Positives = 391/690 (56%), Gaps = 81/690 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAKYGTTVINICDERWKQPQ---- 665
            ++L+KW G S IHN+W  E  L   K    +KL+N+  K   T       R+  P+    
Sbjct: 400  QYLIKWKGWSYIHNTWESERTLRDMKAKGMKKLDNFIKKEQETAYW---RRYAGPEDIDY 456

Query: 666  -------------------RVISLRSSKD-GTREAFVKWTGLPYDECTWEKLDEPALEKY 705
                               R+I+  S  D GT E   KW  LPY E TWE      L K+
Sbjct: 457  FECQQELQHELLKSYNNVDRIIAKGSKPDVGTDEFLCKWQSLPYAEATWEDATL-VLRKW 515

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG-ALFPHQ 760
                + F   +R++ K   S          C+    + +   +  QP+ L  G  L  +Q
Sbjct: 516  QRCAEQF--HDRESSKCTPSRH--------CRVLKYRPKFSRIKNQPDYLVAGLVLRDYQ 565

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            ++ LNWL   W K  +VILADEMGLGKT+    F+ SL+       P L +VPLSTM  W
Sbjct: 566  MDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKVHHLYGPFLCVVPLSTMTAW 625

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
              EF LWAP++NVV Y G  K+R +I+QYEW       L       KFN +LTTYE++L 
Sbjct: 626  QREFDLWAPDMNVVTYLGDIKSREMIQQYEWQFEGSKRL-------KFNCILTTYEIVLK 678

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D   L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+
Sbjct: 679  DKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLH 738

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
            F+ P  F +  +FE +  +    +    L + + P++LRR+KKD  +++P K E+++ VE
Sbjct: 739  FIMPEKFDTWDNFELQHGN-AEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVE 797

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            ++S+Q +YY+ +LTKN+  LR  GK  +  + LNIV++L+K CNH  LI  +E +   ++
Sbjct: 798  MTSLQKQYYKWILTKNFDALRK-GKKGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQ 856

Query: 1061 FLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
                ++  +K S KL LL  +L  L + GHRVLIFSQM ++LD+L DYL     P  ++R
Sbjct: 857  QDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFP--FQR 914

Query: 1119 VDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DGS+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+Q
Sbjct: 915  LDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 974

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSG- 1225
            A  RAHRIGQ  ++ +YRLV   SVEE+I++ AK+K++LD L +           +KSG 
Sbjct: 975  AQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGN 1034

Query: 1226 ---------SQKEVEDILRWGTEELFNDSP 1246
                     ++ ++  IL++G EELF D P
Sbjct: 1035 GHSSNSNPFNKDDLSAILKFGAEELFKDEP 1064


>gi|242000110|ref|XP_002434698.1| chromodomain helicase DNA binding protein, putative [Ixodes
            scapularis]
 gi|215498028|gb|EEC07522.1| chromodomain helicase DNA binding protein, putative [Ixodes
            scapularis]
          Length = 1882

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 235/459 (51%), Positives = 316/459 (68%), Gaps = 21/459 (4%)

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN------ 860
            P LV  PLST+ NW  EF LWAP+  VV Y G   +RA+IR++E+   +    N      
Sbjct: 759  PFLVSAPLSTIINWEREFELWAPDFYVVTYIGDKDSRAVIREHEFSFDEKAVRNPNKACR 818

Query: 861  -KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
             KK +S KF+VLLT+YE++  D++ L  V W+VLVVDE HRLKN+ SK F +LN++   +
Sbjct: 819  MKKDASVKFHVLLTSYELVCIDATILGSVDWQVLVVDEAHRLKNNQSKFFKVLNNYKINY 878

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            ++LLTGTPLQNN+ E+++LLNFL P +F  L  F  +F DL   ++V++L  L+  H+LR
Sbjct: 879  KLLLTGTPLQNNLEELFHLLNFLSPQNFNDLQGFLNEFADLAKEEQVKKLHDLLGCHLLR 938

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK D ++ +P K+E ++ V+L+ +Q +YY+ +LT+NY+ L N   G    S+LNI+M L
Sbjct: 939  RLKADVLKGMPSKSEFIIRVDLTPLQKKYYKYILTRNYEAL-NAKGGSHSVSLLNIMMDL 997

Query: 1040 RKVCNHPYLIPGTE---PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +K CNHPYL P      P   +  +      KA  KL LLH ML+ L + GHRVLIFSQM
Sbjct: 998  KKCCNHPYLFPAASQEAPRMPNGAYEGSALTKACGKLILLHKMLRTLKETGHRVLIFSQM 1057

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGI 1155
            TK+LDI+ED+L  E G K YER+DG ++   RQ AI RFN  +  +F FLLSTR+ GLGI
Sbjct: 1058 TKMLDIMEDFLEAE-GYK-YERIDGGITGSQRQEAIDRFNAPNAPQFCFLLSTRAGGLGI 1115

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NLATADTVIIYDSD+NPH DIQA +RAHRIGQ+ ++++YR V RASVEERI Q+AKKK+M
Sbjct: 1116 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKKKMM 1175

Query: 1216 LDQLFV-------NKSGSQKEVEDILRWGTEELFNDSPG 1247
            L  L V       + + S++E++DILR+GTEELF D  G
Sbjct: 1176 LTHLVVRPGMGSRSNTMSKQELDDILRFGTEELFKDDEG 1214



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCT 120
           C +C  GG LLCCDSCP  +H  CL+PPLK +P GKW CP+C+
Sbjct: 478 CRVCKDGGELLCCDSCPAAFHTFCLNPPLKNVPTGKWNCPRCS 520



 Score = 58.5 bits (140), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 4/53 (7%)

Query: 71  NDGYYYE----CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKC 119
           NDGY  +    C +C  GG ++ CD+CPR YHL CL+P L+  P GKW CP C
Sbjct: 409 NDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELEEPPEGKWSCPHC 461



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 59/151 (39%), Gaps = 38/151 (25%)

Query: 586 TSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENY 645
           ++ S +    +P+ ++  Q K      EF VKW   S  H SWI E+QL V       NY
Sbjct: 562 STPSTSSAAPQPSTSKKPQPK---PLREFFVKWHDMSYWHCSWISENQLDVYHPGLYRNY 618

Query: 646 KAK--------------------------YGTTVINICDER---------WKQPQRVISL 670
             K                           G+      +E+         W Q  RVI+ 
Sbjct: 619 CRKNDMDDPPLPDDGSNGSSDKSNREEKHSGSKNYQNLEEKYYRYGIRPEWLQVHRVINH 678

Query: 671 RSSKDGTREAFVKWTGLPYDECTWEKLDEPA 701
           R+ KDG+    VKW  L YD+ +WE  D+P 
Sbjct: 679 RTLKDGSTLYLVKWRELSYDQSSWEAPDDPG 709


>gi|189237363|ref|XP_970443.2| PREDICTED: similar to kismet CG3696-PA [Tribolium castaneum]
          Length = 4044

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/670 (38%), Positives = 386/670 (57%), Gaps = 67/670 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDERWKQP----- 664
            E+ VK+   S +H  W  E +L    KR   K++ +K +    V NI +    +P     
Sbjct: 1406 EYYVKYRNFSYLHCEWKTEEELYKGDKRIANKIKRFKQRQQQNV-NIFENLEDEPFNPDY 1464

Query: 665  ---QRVISLRSSKDGT-----REAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFV 713
                RV+ +    + T     R   VKW  L Y++CTWE    +D   +E++     +  
Sbjct: 1465 VEVDRVLDVAEHTEPTTQEVVRHYLVKWRALQYEDCTWELEEDVDPIKIEQFKKFRQIPP 1524

Query: 714  QFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHK 773
            + + +  K+ + +             + V L + P    G +L  +QLE LNWL   W+ 
Sbjct: 1525 KDKWKPKKRPSPD-------------QWVKLDKSPIYKGGNSLREYQLEGLNWLLFSWYN 1571

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
             +N ILADEMGLGKT+ +  F+++++ E+  + P LV+ PLST+PNW  E   W   +NV
Sbjct: 1572 GRNCILADEMGLGKTIQSLTFLNAVW-EYGIRGPFLVIAPLSTIPNWQREIESWT-EMNV 1629

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
            + YHG A +R +I++YE    + D  +      KFN+L+TT+E+I+ D + L+G  W + 
Sbjct: 1630 IVYHGSAASRNMIQEYEMFFKN-DRGHHIRDLTKFNILITTFEIIVTDFADLKGFNWRIC 1688

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
            V+DE HRLKN   KL   L   + +HRVLL+GTPLQNN+ E+++LLNFL+P  FPS  SF
Sbjct: 1689 VIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFPSSESF 1748

Query: 954  EEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAML 1013
             ++F  L + Q+V++L+ ++ P MLRRLK+D  +++ PK E +V VEL++IQ +YYRA+L
Sbjct: 1749 LQEFGALKSEQEVQKLQLILKPMMLRRLKEDVEKSLAPKEETVVEVELTNIQKKYYRAIL 1808

Query: 1014 TKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMR------- 1066
             +N+  L          +++N +M+LRK C HPYL+ G E     +++ ++M        
Sbjct: 1809 ERNFSFLSKGTTHANIPNLMNTMMELRKCCIHPYLLNGAE---DQIQYDYKMAQGEDPDA 1865

Query: 1067 -----IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
                 I +S K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +ER+DG
Sbjct: 1866 YYKALINSSGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLMFRKYP--FERIDG 1923

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             +    RQAAI RF++ D  RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  
Sbjct: 1924 RIRGNLRQAAIDRFSRPDSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQA 1983

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------------NKSGSQ 1227
            R HRIGQ K + +YRL+ R + E  +   A  KL LD+  +             +K  S+
Sbjct: 1984 RCHRIGQQKMVKIYRLLCRNTYEREMFDKASLKLGLDKAILQSMNTSQGGKDSGSKQLSK 2043

Query: 1228 KEVEDILRWG 1237
            KE+ED+L+ G
Sbjct: 2044 KEIEDLLKKG 2053


>gi|270007595|gb|EFA04043.1| hypothetical protein TcasGA2_TC014275 [Tribolium castaneum]
          Length = 4075

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/670 (38%), Positives = 386/670 (57%), Gaps = 67/670 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDERWKQP----- 664
            E+ VK+   S +H  W  E +L    KR   K++ +K +    V NI +    +P     
Sbjct: 1437 EYYVKYRNFSYLHCEWKTEEELYKGDKRIANKIKRFKQRQQQNV-NIFENLEDEPFNPDY 1495

Query: 665  ---QRVISLRSSKDGT-----REAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFV 713
                RV+ +    + T     R   VKW  L Y++CTWE    +D   +E++     +  
Sbjct: 1496 VEVDRVLDVAEHTEPTTQEVVRHYLVKWRALQYEDCTWELEEDVDPIKIEQFKKFRQIPP 1555

Query: 714  QFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHK 773
            + + +  K+ + +             + V L + P    G +L  +QLE LNWL   W+ 
Sbjct: 1556 KDKWKPKKRPSPD-------------QWVKLDKSPIYKGGNSLREYQLEGLNWLLFSWYN 1602

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
             +N ILADEMGLGKT+ +  F+++++ E+  + P LV+ PLST+PNW  E   W   +NV
Sbjct: 1603 GRNCILADEMGLGKTIQSLTFLNAVW-EYGIRGPFLVIAPLSTIPNWQREIESWT-EMNV 1660

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
            + YHG A +R +I++YE    + D  +      KFN+L+TT+E+I+ D + L+G  W + 
Sbjct: 1661 IVYHGSAASRNMIQEYEMFFKN-DRGHHIRDLTKFNILITTFEIIVTDFADLKGFNWRIC 1719

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
            V+DE HRLKN   KL   L   + +HRVLL+GTPLQNN+ E+++LLNFL+P  FPS  SF
Sbjct: 1720 VIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFPSSESF 1779

Query: 954  EEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAML 1013
             ++F  L + Q+V++L+ ++ P MLRRLK+D  +++ PK E +V VEL++IQ +YYRA+L
Sbjct: 1780 LQEFGALKSEQEVQKLQLILKPMMLRRLKEDVEKSLAPKEETVVEVELTNIQKKYYRAIL 1839

Query: 1014 TKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMR------- 1066
             +N+  L          +++N +M+LRK C HPYL+ G E     +++ ++M        
Sbjct: 1840 ERNFSFLSKGTTHANIPNLMNTMMELRKCCIHPYLLNGAE---DQIQYDYKMAQGEDPDA 1896

Query: 1067 -----IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
                 I +S K+ L+  +L  L   GHRVLIFSQM + LDILEDYL     P  +ER+DG
Sbjct: 1897 YYKALINSSGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLMFRKYP--FERIDG 1954

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             +    RQAAI RF++ D  RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  
Sbjct: 1955 RIRGNLRQAAIDRFSRPDSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQA 2014

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------------NKSGSQ 1227
            R HRIGQ K + +YRL+ R + E  +   A  KL LD+  +             +K  S+
Sbjct: 2015 RCHRIGQQKMVKIYRLLCRNTYEREMFDKASLKLGLDKAILQSMNTSQGGKDSGSKQLSK 2074

Query: 1228 KEVEDILRWG 1237
            KE+ED+L+ G
Sbjct: 2075 KEIEDLLKKG 2084


>gi|386769008|ref|NP_001245851.1| Chromodomain-helicase-DNA-binding protein 1, isoform B [Drosophila
            melanogaster]
 gi|383291295|gb|AFH03528.1| Chromodomain-helicase-DNA-binding protein 1, isoform B [Drosophila
            melanogaster]
          Length = 1900

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 276/685 (40%), Positives = 391/685 (57%), Gaps = 75/685 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            +FL+KW G S IHN+W  E+ L   K    +KL+N+  K                 Y   
Sbjct: 384  QFLIKWKGWSYIHNTWESEATLRDMKAKGMKKLDNFIKKEKEQAYWRRYAGPEDIDYFEC 443

Query: 653  VINICDERWKQPQRV--ISLRSSK--DGTREAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
             + +  E  K    V  I  + SK  DGT E   KW  LPY E TWE      L K+   
Sbjct: 444  QLELQHELLKSYNNVDRIIAKGSKPDDGTEEYLCKWQSLPYAESTWEDA-ALVLRKWQRC 502

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG-ALFPHQLEA 763
             + F   +R++ K   S          C+    + +   +  QPE L  G  L  +Q++ 
Sbjct: 503  AEQFN--DRESSKCTPSRH--------CRVIKYRPKFSRIKNQPEFLSSGLTLRDYQMDG 552

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LNWL   W K  +VILADEMGLGKT+    F+ SL+       P L +VPLSTM  W  E
Sbjct: 553  LNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAWQRE 612

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F LWAP++NVV Y G  K+R +I+QYEW       L       KFN +LTTYE++L D  
Sbjct: 613  FDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRL-------KFNCILTTYEIVLKDKQ 665

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+F+ 
Sbjct: 666  FLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIM 725

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            P  F +  +FE +  +    +    L + + P++LRR+KKD  +++P K E+++ VE++S
Sbjct: 726  PDKFDTWENFEVQHGN-AEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTS 784

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLH 1063
            +Q +YY+ +LTKN+  LR  GK  +  + LNIV++L+K CNH  LI  +E +   ++   
Sbjct: 785  LQKQYYKWILTKNFDALRK-GKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDE 843

Query: 1064 EMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
             ++  +K S KL LL  +L  L + GHRVLIFSQM ++LD+L DYL     P  ++R+DG
Sbjct: 844  ALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFP--FQRLDG 901

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            S+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA  
Sbjct: 902  SIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQA 961

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSG---- 1225
            RAHRIGQ  ++ +YRLV   SVEE+I++ AK+K++LD L +           +KSG    
Sbjct: 962  RAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHS 1021

Query: 1226 ------SQKEVEDILRWGTEELFND 1244
                  ++ ++  IL++G EELF D
Sbjct: 1022 SNSNPFNKDDLSAILKFGAEELFKD 1046


>gi|395510554|ref|XP_003759539.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Sarcophilus
            harrisii]
          Length = 1834

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 279/682 (40%), Positives = 398/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 346  QYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 405

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 406  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 462

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL---KGGALFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  +   +G  L  +QL 
Sbjct: 463  QLRIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGPEGLELRDYQLN 516

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 517  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 576

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WAP +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 577  EIQTWAPQMNAVVYLGDINSRNMIRTHEW-------MHLQTKRLKFNILLTTYEILLKDK 629

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 630  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 689

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 690  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 748

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 749  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 807

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 808  ALQHL-IRSSGKLILLDKLLIRLKERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 864

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 865  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 924

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 925  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 984

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 985  SSTPFNKEELSAILKFGAEELF 1006


>gi|17137266|ref|NP_477197.1| Chromodomain-helicase-DNA-binding protein 1, isoform A [Drosophila
            melanogaster]
 gi|75009913|sp|Q7KU24.1|CHD1_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein 1;
            Short=CHD-1; AltName: Full=ATP-dependent helicase Chd1
 gi|7295870|gb|AAF51170.1| Chromodomain-helicase-DNA-binding protein 1, isoform A [Drosophila
            melanogaster]
          Length = 1883

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 276/685 (40%), Positives = 391/685 (57%), Gaps = 75/685 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            +FL+KW G S IHN+W  E+ L   K    +KL+N+  K                 Y   
Sbjct: 367  QFLIKWKGWSYIHNTWESEATLRDMKAKGMKKLDNFIKKEKEQAYWRRYAGPEDIDYFEC 426

Query: 653  VINICDERWKQPQRV--ISLRSSK--DGTREAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
             + +  E  K    V  I  + SK  DGT E   KW  LPY E TWE      L K+   
Sbjct: 427  QLELQHELLKSYNNVDRIIAKGSKPDDGTEEYLCKWQSLPYAESTWEDA-ALVLRKWQRC 485

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG-ALFPHQLEA 763
             + F   +R++ K   S          C+    + +   +  QPE L  G  L  +Q++ 
Sbjct: 486  AEQFN--DRESSKCTPSRH--------CRVIKYRPKFSRIKNQPEFLSSGLTLRDYQMDG 535

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LNWL   W K  +VILADEMGLGKT+    F+ SL+       P L +VPLSTM  W  E
Sbjct: 536  LNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAWQRE 595

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F LWAP++NVV Y G  K+R +I+QYEW       L       KFN +LTTYE++L D  
Sbjct: 596  FDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRL-------KFNCILTTYEIVLKDKQ 648

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+F+ 
Sbjct: 649  FLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIM 708

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            P  F +  +FE +  +    +    L + + P++LRR+KKD  +++P K E+++ VE++S
Sbjct: 709  PDKFDTWENFEVQHGN-AEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTS 767

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLH 1063
            +Q +YY+ +LTKN+  LR  GK  +  + LNIV++L+K CNH  LI  +E +   ++   
Sbjct: 768  LQKQYYKWILTKNFDALRK-GKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDE 826

Query: 1064 EMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
             ++  +K S KL LL  +L  L + GHRVLIFSQM ++LD+L DYL     P  ++R+DG
Sbjct: 827  ALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFP--FQRLDG 884

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            S+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA  
Sbjct: 885  SIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQA 944

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSG---- 1225
            RAHRIGQ  ++ +YRLV   SVEE+I++ AK+K++LD L +           +KSG    
Sbjct: 945  RAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHS 1004

Query: 1226 ------SQKEVEDILRWGTEELFND 1244
                  ++ ++  IL++G EELF D
Sbjct: 1005 SNSNPFNKDDLSAILKFGAEELFKD 1029


>gi|332209064|ref|XP_003253631.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 6 [Nomascus leucogenys]
          Length = 2722

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/601 (43%), Positives = 353/601 (58%), Gaps = 50/601 (8%)

Query: 665  QRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA 724
            +  +S   S        VKW  LPY+E TWE  ++    K      L V  E + +++ A
Sbjct: 391  EHXVSFLFSHQEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKHVERPA 450

Query: 725  SEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
            S         D  Q     L +  E      L  +QLE +NWL   W+  KN ILADEMG
Sbjct: 451  S---------DSWQK----LEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMG 497

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG   +R 
Sbjct: 498  LGKTIQSITFLSEIFLR-GIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQ 555

Query: 845  IIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNS 904
            +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE HRLKN 
Sbjct: 556  MIQQYEMVYRDAQG-NPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNR 614

Query: 905  GSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQ 964
              KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F DL T +
Sbjct: 615  NCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDLKTEE 674

Query: 965  KVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIG 1024
            +V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  L    
Sbjct: 675  QVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLT--- 731

Query: 1025 KGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHEMRIKA 1069
            KG  Q +M N++   M+LRK CNHPYLI G E            PD  + +F  +  I+A
Sbjct: 732  KGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--APDFQLQAMIQA 789

Query: 1070 SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQ 1129
            + KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V    RQ
Sbjct: 790  AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVRGNLRQ 847

Query: 1130 AAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 1188
            AAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQS
Sbjct: 848  AAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQS 907

Query: 1189 KRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVEDILRWG 1237
            K + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED+LR G
Sbjct: 908  KAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVEDLLRKG 967

Query: 1238 T 1238
             
Sbjct: 968  A 968


>gi|395831857|ref|XP_003789001.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Otolemur
            garnettii]
          Length = 1801

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 279/682 (40%), Positives = 395/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 319  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 378

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 379  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 435

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 436  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 489

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  N ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 490  GLNWLAHSWCKGNNCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 549

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 550  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 602

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 603  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 662

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 663  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 721

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 722  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 780

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 781  ALQHL-IRSSGKLILLDKLLIRLRERGSRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 837

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 838  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 897

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 898  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 957

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 958  SSTPFNKEELSAILKFGAEELF 979


>gi|388580068|gb|EIM20386.1| hypothetical protein WALSEDRAFT_33426 [Wallemia sebi CBS 633.66]
          Length = 1402

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/646 (40%), Positives = 376/646 (58%), Gaps = 48/646 (7%)

Query: 659  ERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
            E +++ +R++  R S   T E F KWTGL Y ECTWEK D+ +      +    ++    
Sbjct: 306  EMYRKVERILDQRDS-GTTTEYFCKWTGLQYSECTWEKHDDVSQYAPEQIDAYLLRTAST 364

Query: 719  TLKKDASEDELPRGKGDCQQSE--IVALTEQPE--ELKGGALFPHQLEALNWLRKCWHKS 774
            T+         P    +  +S      L E P+  ++ GG L  +Q+  LNWL   W + 
Sbjct: 365  TV---------PNRSANYNRSRPAFRTLMESPDYIQVTGGELLDYQMTGLNWLAYLWSRM 415

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
            ++ ILADEMGLGKTV + A+IS L+ E +   P LV+VPLST+P W A+F  WAP++NVV
Sbjct: 416  ESGILADEMGLGKTVQSIAWISWLFHERQQYGPFLVVVPLSTIPAWQAQFMKWAPDINVV 475

Query: 835  EYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
             Y+G  K+R +IR+YE+   D   L       KFNVLLTTYE  L D + L  + W+ L+
Sbjct: 476  CYNGSGKSREVIREYEF--GDYKKL-------KFNVLLTTYEFCLKDRAELGQMRWQALL 526

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            VDE HRLKNS S+L+  L SF    ++L+TGTPLQNN+ E+  L++FL P  +     FE
Sbjct: 527  VDEAHRLKNSESQLYETLFSFVTNSKLLITGTPLQNNVKELSALMHFLMPERYSITGDFE 586

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
                D    +K+ +L   +   MLRRLK+D ++++P K+ER++ VELSS+Q  YYR +LT
Sbjct: 587  --LTDEDREEKIGQLHDQLKNIMLRRLKRDVIKSLPTKSERILRVELSSLQTHYYRNILT 644

Query: 1015 KNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLT 1074
            KN+  L++   G    SM+NI   LRK  NHPYL  G E    + + +    +  S K+ 
Sbjct: 645  KNFTALKSSEGGGPAMSMMNIANDLRKASNHPYLFDGAEGSINAKDEVLRGIVMNSGKMV 704

Query: 1075 LLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITR 1134
            LL  +L  L  +GHRVLIFSQM ++LDI+ DYL++      ++R+DG++    R+ AI  
Sbjct: 705  LLDKLLARLKADGHRVLIFSQMVRMLDIISDYLSLR--GYMHQRLDGTIPSEQRRKAINH 762

Query: 1135 FNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            FN + S  F F+LSTR+ GLGI+L TA+TVII+DSD+NP  D+QAM RAHRIGQ   + +
Sbjct: 763  FNAENSPDFAFILSTRAGGLGIDLQTANTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSI 822

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFVNK---SG----------------SQKEVEDIL 1234
            YR V + ++EE IL+ AK+K++L+   +N+   SG                S++E+  IL
Sbjct: 823  YRFVSKDTMEEDILERAKRKMVLEYAIINQVDTSGKNIGQPKSAKQQPDNFSREELSAIL 882

Query: 1235 RWGTEELFNDSPGINGKDMGENNT-SIEEAVRDLEQKHRKRGGGLG 1279
            ++G + +F        K + E N   +     DLE      G  LG
Sbjct: 883  KFGAQNMFKTDDKEQNKKLAELNLDDLLARAEDLESDKAVGGSSLG 928


>gi|238624120|ref|NP_001121770.2| chromodomain helicase DNA binding protein 1 [Danio rerio]
          Length = 1693

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 273/683 (39%), Positives = 395/683 (57%), Gaps = 76/683 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYK-----------------AKYGTT 652
            ++L+KW   S+IHN+W  E  LK   V   +KL+N+K                  +Y   
Sbjct: 305  QYLIKWKNWSHIHNTWETEETLKQQNVKGMKKLDNFKKKEQEKKKWLKAASPEDVEYFNC 364

Query: 653  VINICDERWKQPQ---RVI--SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+   Q Q   R+I  S + S  G  +   KW GLPY EC+WE   + AL  +K+
Sbjct: 365  QQELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWE---DGALISKKF 421

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGAL--FPHQLEA 763
                D ++   R   K   S D     K   Q+   V + +QP  + G  L    +QL+ 
Sbjct: 422  QKCIDEYMS--RNQCKTIPSRD----CKVLKQRPRFVPMKKQPHYIGGEGLELRDYQLDG 475

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LNW+   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  E
Sbjct: 476  LNWMAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQRE 535

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
              LWAP +NVV Y G   +R +IR +EW       ++ +T   K N+LLTTYE++L D S
Sbjct: 536  IQLWAPLMNVVVYLGDINSRNMIRTHEW-------MHPQTKRLKLNILLTTYEILLKDKS 588

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             L  V W  + VDE HRLKN  S L+  +  F   HR+L+TGTPLQN++ E+++LL+F+ 
Sbjct: 589  FLGNVSWAFIGVDEAHRLKNDDSLLYKTMIEFKSNHRLLITGTPLQNSLKELWSLLHFIM 648

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            P  F S   FEE+      +     L K + P +LRR+KKD  +++P K E+++ VE+S+
Sbjct: 649  PEKFHSWEMFEEEHGKGRDSGYTS-LHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSA 707

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSV---- 1059
            +Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI    PD        
Sbjct: 708  VQKQYYKWILTRNYKALSKGTKG-STSGFLNIMMELKKCCNHCYLI--KPPDDNEFYNRQ 764

Query: 1060 EFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
            E L  + +++S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL  ++    ++R+
Sbjct: 765  EGLQHL-VRSSGKLILLDKLLVRLKERGHRVLIFSQMVRMLDILAEYL--KYRQFLFQRL 821

Query: 1120 DGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA
Sbjct: 822  DGSIKGEMRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQA 881

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS------------ 1226
              RAHRIGQ K++ +YRLV + SVEE I++ AKKK++LD L + +  +            
Sbjct: 882  QARAHRIGQKKQVNIYRLVTKGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAP 941

Query: 1227 -------QKEVEDILRWGTEELF 1242
                   ++E+  IL++G EELF
Sbjct: 942  SSSTPFNKEELSAILKFGAEELF 964


>gi|296194069|ref|XP_002744792.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Callithrix
            jacchus]
          Length = 1713

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 277/686 (40%), Positives = 395/686 (57%), Gaps = 81/686 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 319  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 378

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWE------KLDEPA 701
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE      K  +P 
Sbjct: 379  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKKFQPC 438

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFP 758
            +++Y         F R   K    +D     K   Q+   VAL +QP  + G     L  
Sbjct: 439  IDEY---------FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRD 485

Query: 759  HQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
            +QL  LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ 
Sbjct: 486  YQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLT 545

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
            +W  E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++
Sbjct: 546  SWQREIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEIL 598

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            L D + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++L
Sbjct: 599  LKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSL 658

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            L+F+ P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ 
Sbjct: 659  LHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILR 717

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDS 1056
            +E+S++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P      
Sbjct: 718  MEMSALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFY 776

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
               E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  +
Sbjct: 777  NKQEALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--F 833

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            +R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D
Sbjct: 834  QRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQND 893

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SG 1225
            +QA  RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +G
Sbjct: 894  LQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTG 953

Query: 1226 S---------QKEVEDILRWGTEELF 1242
            S         ++E+  IL++G EELF
Sbjct: 954  SAPSSSTPFNKEELSAILKFGAEELF 979


>gi|195116617|ref|XP_002002850.1| GI10771 [Drosophila mojavensis]
 gi|193913425|gb|EDW12292.1| GI10771 [Drosophila mojavensis]
          Length = 1908

 Score =  455 bits (1170), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 268/688 (38%), Positives = 389/688 (56%), Gaps = 81/688 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPES---QLKVLAKRKLENYKAKYGTTVINICDERWKQPQRV-- 667
            ++L+KW G S IHN+W  E+   ++K    +KL+N+  K   T    C  R+  P+ +  
Sbjct: 380  QYLIKWKGWSYIHNTWESETTLREMKAKGMKKLDNFIKKEQDTA---CWRRYAGPEDIDY 436

Query: 668  --------------------ISLRSSK--DGTREAFVKWTGLPYDECTWEKLDEPALEKY 705
                                I  R +K  DG+ E   KW  LPY E TWE        K+
Sbjct: 437  FECQQELQHDLLKSYNNVDRIIARGTKPEDGSEEFLCKWQSLPYSESTWEDA-TLVFRKW 495

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEEL-KGGALFPHQ 760
                + F   ER+  K   S          C+    + +   +  QP+ L +G  L  +Q
Sbjct: 496  QRCVEQFT--ERENSKWTPSRH--------CRVIKYRPKFSRIRSQPDFLVEGLTLRDYQ 545

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            ++ LNWL   W K  +VILADEMGLGKT+    F+ SL+       P L +VPLSTM  W
Sbjct: 546  MDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAW 605

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
              EF LWAP++NVV Y G  K+R +I+QYEW       L       KFN +LTTYE++L 
Sbjct: 606  QREFDLWAPDMNVVTYLGDVKSRELIQQYEWQFEGSKRL-------KFNCILTTYEIVLK 658

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D   L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+
Sbjct: 659  DKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLH 718

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
            F+ P  F +  +FE +  +    +    L + + P++LRR+KKD  +++P K E+++ VE
Sbjct: 719  FIMPEKFDTWENFELQHGN-AEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVE 777

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            ++S+Q +YY+ +LTKN+  LR  GK  +  + LNIV++L+K CNH  LI  +E +   ++
Sbjct: 778  MTSLQKQYYKWILTKNFDALRK-GKRGSTSTFLNIVIELKKCCNHAALIRPSEFELFGLQ 836

Query: 1061 FLHEMRI--KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
                +++  K S KL LL  +L  L + GHRVLIFSQM ++LD+L DYL       +++R
Sbjct: 837  QDEALQVLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHF--SFQR 894

Query: 1119 VDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DGS+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+Q
Sbjct: 895  LDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 954

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS----------- 1226
            A  RAHRIGQ  ++ +YRLV   SVEE+I++ AK+K++LD L + +  +           
Sbjct: 955  AQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGS 1014

Query: 1227 ----------QKEVEDILRWGTEELFND 1244
                      + ++  IL++G EELF D
Sbjct: 1015 GHSSNSNPFNKDDLSAILKFGAEELFKD 1042


>gi|330916188|ref|XP_003297327.1| hypothetical protein PTT_07688 [Pyrenophora teres f. teres 0-1]
 gi|311330071|gb|EFQ94584.1| hypothetical protein PTT_07688 [Pyrenophora teres f. teres 0-1]
          Length = 1580

 Score =  455 bits (1170), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 269/656 (41%), Positives = 374/656 (57%), Gaps = 53/656 (8%)

Query: 612  YEFLVKWVGKSNIHNSWIP-ESQLKVLAKRKLENY------------------KAKYGTT 652
            +E+L+KW  K++ H+SW   ++       RKL+NY                    ++   
Sbjct: 293  FEYLIKWQDKAHYHSSWEDYKTAASYKGYRKLDNYFKGPVSSDMYFHSRKDEDPEEFEQH 352

Query: 653  VINICDERWKQ-----PQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
            ++    ER  Q      +RVI  R  +D T + FVKW GL Y+ CTWE     +    S 
Sbjct: 353  MVAREAERESQLDFHVVERVIDSRDGEDET-DYFVKWKGLTYEFCTWEPASLVSRLSQSE 411

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
            + D F+         D  E           + + V L  QP+ +K G L   QL+ +N+L
Sbjct: 412  I-DRFLDRSSNRPSSDLRE------TNPNTRRKFVKLDAQPDYIKFGQLRSFQLQGVNFL 464

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W +  NVILADEMGLGKTV   +FI+ L  +     P + +VPLSTMP W   F  W
Sbjct: 465  AHNWCRGTNVILADEMGLGKTVQTVSFINWLRHDRHQDGPMICVVPLSTMPAWADTFNNW 524

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P++N V Y G  +ARAIIR  E        ++  T   KFNVLLTTYE +LAD   L+ 
Sbjct: 525  TPDVNYVIYTGREEARAIIRDKELL------VDGNTKKIKFNVLLTTYEYVLADWQFLQS 578

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ L VDE HRLKN  S+L+  L  F+   R+L+TGTP+QN +GE+  L++FL P   
Sbjct: 579  IKWQFLAVDEAHRLKNRDSQLYDRLRQFNAPCRLLITGTPIQNTLGELAALMDFLMPGKI 638

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
                  +    D   +QK+ EL   + P+M+RR K+    ++PPK+E+++ VELS IQ E
Sbjct: 639  TVDEHVDLASED--ASQKLAELSSAIQPYMIRRTKEKVENDLPPKSEKILRVELSDIQLE 696

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE-----PDSGSVEFL 1062
            YY+ +LT+NY+ L   G G  +QS+LNIVM+L+K  NH  L P  E     P S   E L
Sbjct: 697  YYKNILTRNYEALNEGGVG-HKQSLLNIVMELKKASNHALLFPNAENKLVKPGSSKEETL 755

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              + I +S K+ LL  +L  L  +GHRVLIFSQM  +LDIL DYL +     +++R+DG+
Sbjct: 756  KAL-ITSSGKMMLLDRLLGKLKADGHRVLIFSQMVHMLDILTDYLKLRN--YSFQRLDGT 812

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            V   DR+ AI  FN   S  + FLLSTR+ GLGINL TADTV+I+DSD+NP AD+QAM R
Sbjct: 813  VPAADRKIAIDHFNAPGSEDYCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMAR 872

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS---QKEVEDIL 1234
            AHRIGQ K + VYRLV + ++EE IL+ A+ K ML+ + + +  +   QKE+ D +
Sbjct: 873  AHRIGQQKPVSVYRLVSKDTIEEEILERARNKRMLEFITIQRGVTDRQQKELNDKM 928


>gi|1448983|gb|AAC37264.1| chromodomain-helicase-DNA-binding protein [Drosophila melanogaster]
          Length = 1883

 Score =  454 bits (1169), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 276/685 (40%), Positives = 390/685 (56%), Gaps = 75/685 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            +FL+KW G S IHN+W  E+ L   K    +KL+N+  K                 Y   
Sbjct: 367  QFLIKWKGWSYIHNTWESEATLRDMKAKGMKKLDNFIKKEKEQAYWRRYAGPEDIDYFEC 426

Query: 653  VINICDERWKQPQRV--ISLRSSK--DGTREAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
             + +  E  K    V  I  + SK  DGT E   KW  LPY E TWE      L K+   
Sbjct: 427  QLELQHELLKSYNNVDRIIAKGSKPDDGTEEYLCKWQSLPYAESTWEDA-ALVLRKWQRC 485

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG-ALFPHQLEA 763
             + F   +R++ K   S          C+    + +   +  QPE L  G  L  +Q++ 
Sbjct: 486  AEQFN--DRESSKCTPSRH--------CRVIKYRPKFSRIKNQPEFLSSGLTLRDYQMDG 535

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LNWL   W K  +VILADEMGLGKT+    F+ SL+       P L +VPLSTM  W  E
Sbjct: 536  LNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAWQRE 595

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F LWAP++NVV Y G  K+R +I+QYEW       L       KFN +LTTYE++L D  
Sbjct: 596  FDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRL-------KFNCILTTYEIVLKDKQ 648

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+F+ 
Sbjct: 649  FLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIM 708

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            P  F +  +FE +  +         L + + P++LRR+KKD  +++P K E+++ VE++S
Sbjct: 709  PDKFDTWENFEVQHGNAEDKGHTR-LHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTS 767

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLH 1063
            +Q +YY+ +LTKN+  LR  GK  +  + LNIV++L+K CNH  LI  +E +   ++   
Sbjct: 768  LQKQYYKWILTKNFDALRK-GKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDE 826

Query: 1064 EMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
             ++  +K S KL LL  +L  L + GHRVLIFSQM ++LD+L DYL     P  ++R+DG
Sbjct: 827  ALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFP--FQRLDG 884

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            S+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA  
Sbjct: 885  SIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQA 944

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSG---- 1225
            RAHRIGQ  ++ +YRLV   SVEE+I++ AK+K++LD L +           +KSG    
Sbjct: 945  RAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHS 1004

Query: 1226 ------SQKEVEDILRWGTEELFND 1244
                  ++ ++  IL++G EELF D
Sbjct: 1005 SNSNPFNKDDLSAILKFGAEELFKD 1029


>gi|405964991|gb|EKC30422.1| Chromodomain-helicase-DNA-binding protein 9 [Crassostrea gigas]
          Length = 2683

 Score =  454 bits (1169), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 291/778 (37%), Positives = 422/778 (54%), Gaps = 74/778 (9%)

Query: 516  REDDKDSDP-----VAVNGKVQDESAVSTEDLGERNDKMVVEDADVSLRDNEGLTVSEIH 570
            R D  +SDP     V    ++ D+S            K  ++D D++L D++   V    
Sbjct: 233  RHDSSESDPELKHAVGETEEMDDDSIQKRRSARNTKRKKYLDDVDLNLSDDDTQDVEPEA 292

Query: 571  ITCESTDKDVDVGKKTSGSVA------------KRVQEPAVTESAQVKGKAVSYEFLVKW 618
               +     VD  ++ + S+             K +     TE      + V  EF VK+
Sbjct: 293  FAEQPAAVRVDTIEEDNSSIVDKILGSRMRKADKDISVDGETEEQSTSNEEVE-EFFVKY 351

Query: 619  VGKSNIHNSWIPESQLKVLAKR---KLENY--KAKYGTTVINICDER------WKQPQRV 667
               S +H  W    +L+   KR   KL+ Y  K      + +  DE       + +  RV
Sbjct: 352  KNFSYLHCEWKTAEELERGDKRIHQKLKRYYMKKTQSQNMFSELDEDELFNPDYTEVHRV 411

Query: 668  ISLR-----SSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKK 722
            + +      +  D      VKW GLPY+E TWE   +    K  H    F +F      +
Sbjct: 412  LDVSKLSDPNGGDDITHFLVKWKGLPYEEATWELQQDVDPVKVEH----FYKF------R 461

Query: 723  DASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADE 782
            +  ED   + +G     + V L E  E   G +L  +QLE +NWL   WH  +N ILADE
Sbjct: 462  EPPEDAEVKAQG--TPDDWVKLEETREYKNGNSLRDYQLEGVNWLMFSWHNHQNCILADE 519

Query: 783  MGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKA 842
            MGLGKT+ +  F++ +   +  K P LV+VPLST+ NW  EF  W  ++N + YHG + +
Sbjct: 520  MGLGKTIQSITFLNEVML-YGIKGPFLVVVPLSTLGNWEREFETWT-SINAIVYHGSSTS 577

Query: 843  RAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLK 902
            R +++ YE    D +   +  + YKF+ L+TTYE+I++D   L  + W VL++DE HRLK
Sbjct: 578  RNMLQSYEMFYKD-EKGQRIPNQYKFHALITTYEVIISDCELLSDIEWRVLIIDEAHRLK 636

Query: 903  NSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTT 962
            N+  KL   L  F  +H+VLL+GTPLQNN  E+++LL+FL+P  F S  +F  +F +L T
Sbjct: 637  NAKCKLMEGLRMFDCEHQVLLSGTPLQNNTEELHSLLSFLEPERFKSTQAFLAEFGELKT 696

Query: 963  TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL-R 1021
              +VE+LK ++ P MLRRLK+D  +N+  K E +V VEL++IQ +YYRA+L +N+  L +
Sbjct: 697  DSQVEKLKAILKPMMLRRLKEDVEKNLASKEETIVEVELTNIQKKYYRAILERNFTFLSK 756

Query: 1022 NIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT---------EPDSGSVEFLHEMRIKASAK 1072
              G      ++LN +M+LRK CNHPYLI G          E     +E + +  + +S K
Sbjct: 757  GTGSSANVPNLLNTMMELRKCCNHPYLIKGAEDKILNENKETKGNDMEAVFKTMVHSSGK 816

Query: 1073 LTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL-NIEFGPKTYERVDGSVSVGDRQAA 1131
            + LL  +L  L + GH+VLIFSQM ++LDILEDYL N ++    +ER+DG +    RQ A
Sbjct: 817  MVLLDKLLPKLKQGGHKVLIFSQMIRVLDILEDYLINKQY---LFERLDGRICGKLRQEA 873

Query: 1132 ITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKR 1190
            I RF++ +S RFVFLL TR+ GLGINL  ADTVIIYDSD+NP  D+QA  R HRIGQ+K 
Sbjct: 874  IDRFSKPESDRFVFLLCTRAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQTKE 933

Query: 1191 LLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS----------QKEVEDILRWGT 1238
            + VYRL+ R S E  +   A  KL LD+  +   GS          +KE+E++LR G 
Sbjct: 934  VKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMGSDKNAPQAQMTKKEIEELLRKGA 991


>gi|403256189|ref|XP_003920774.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Saimiri
            boliviensis boliviensis]
          Length = 1713

 Score =  454 bits (1169), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 277/686 (40%), Positives = 395/686 (57%), Gaps = 81/686 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 318  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 377

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWE------KLDEPA 701
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE      K  +P 
Sbjct: 378  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALISKKFQPC 437

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFP 758
            +++Y         F R   K    +D     K   Q+   VAL +QP  + G     L  
Sbjct: 438  IDEY---------FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRD 484

Query: 759  HQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
            +QL  LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ 
Sbjct: 485  YQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLT 544

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
            +W  E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++
Sbjct: 545  SWQREIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEIL 597

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            L D + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++L
Sbjct: 598  LKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSL 657

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            L+F+ P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ 
Sbjct: 658  LHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILR 716

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDS 1056
            +E+S++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P      
Sbjct: 717  MEMSALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFY 775

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
               E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  +
Sbjct: 776  NKQEALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--F 832

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            +R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D
Sbjct: 833  QRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQND 892

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SG 1225
            +QA  RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +G
Sbjct: 893  LQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTG 952

Query: 1226 S---------QKEVEDILRWGTEELF 1242
            S         ++E+  IL++G EELF
Sbjct: 953  SAPSSSTPFNKEELSAILKFGAEELF 978


>gi|157818785|ref|NP_001100935.1| chromodomain-helicase-DNA-binding protein 1 [Rattus norvegicus]
 gi|149047090|gb|EDL99810.1| chromodomain helicase DNA binding protein 1 (predicted) [Rattus
            norvegicus]
          Length = 1711

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 277/680 (40%), Positives = 393/680 (57%), Gaps = 69/680 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 315  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 374

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL     
Sbjct: 375  QQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECSWE---DGALISKKF 431

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLEAL 764
             T +   F R   K    +D     K   Q+   VAL +QP  + G     L  +QL  L
Sbjct: 432  QTCIDEYFSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGL 487

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  E 
Sbjct: 488  NWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREI 547

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D + 
Sbjct: 548  QTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDKAF 600

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+ P
Sbjct: 601  LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP 660

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S++
Sbjct: 661  EKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL 719

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVEFL 1062
            Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E L
Sbjct: 720  QKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEAL 778

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+DGS
Sbjct: 779  QHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLDGS 835

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA  R
Sbjct: 836  IKGELRRQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR 895

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS----- 1226
            AHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS     
Sbjct: 896  AHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSS 955

Query: 1227 ----QKEVEDILRWGTEELF 1242
                ++E+  IL++G EELF
Sbjct: 956  TPFNKEELSAILKFGAEELF 975


>gi|455015|gb|AAB08486.1| DNA-binding protein [Mus musculus]
          Length = 1711

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 277/680 (40%), Positives = 393/680 (57%), Gaps = 69/680 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 315  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 374

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL     
Sbjct: 375  QQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECSWE---DGALISKKF 431

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLEAL 764
             T +   F R   K    +D     K   Q+   VAL +QP  + G     L  +QL  L
Sbjct: 432  QTCIDEYFSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGL 487

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  E 
Sbjct: 488  NWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREI 547

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D + 
Sbjct: 548  QTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDKAF 600

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+ P
Sbjct: 601  LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP 660

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S++
Sbjct: 661  EKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL 719

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVEFL 1062
            Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E L
Sbjct: 720  QKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEAL 778

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+DGS
Sbjct: 779  QHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLDGS 835

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA  R
Sbjct: 836  IKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR 895

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS----- 1226
            AHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS     
Sbjct: 896  AHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSS 955

Query: 1227 ----QKEVEDILRWGTEELF 1242
                ++E+  IL++G EELF
Sbjct: 956  TPFNKEELSAILKFGAEELF 975


>gi|348520451|ref|XP_003447741.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like
            [Oreochromis niloticus]
          Length = 3518

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 273/695 (39%), Positives = 387/695 (55%), Gaps = 57/695 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAK-------YGTTVINICDERWKQ 663
            EF VK+   S +H  W    +L+   +  +K++ ++ K       +     ++ +  + +
Sbjct: 430  EFYVKYRNFSYLHCKWATLEELEKDPRIHQKIKRFRTKQAQMKHLFAEPDEDLFNPDYVE 489

Query: 664  PQRVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
              RV+ +  + D           VKW  L Y+E TWE  ++   EK     ++      Q
Sbjct: 490  VDRVLEVAVTTDTETGEEVTHYLVKWCSLSYEEATWELQEDLDPEKIKEFEEI------Q 543

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             L  D    E P         +   L    +   G  L  +QLE +NWL   W+  KN I
Sbjct: 544  KLPADLRHIERP------SPEKWQKLERSRDYRNGNQLREYQLEGMNWLLFNWYNRKNCI 597

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  ++     + P L++ PLST+ NW  EF  W  ++NV+ YHG
Sbjct: 598  LADEMGLGKTIQSITFLYEIFS-MGIRGPFLIIAPLSTITNWEREFRTWT-HMNVIVYHG 655

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R +I QYE    DP   N      KF+ L+TT+EMI+AD   L+ + W  +V+DE 
Sbjct: 656  SQISRQMILQYEMFHRDPQG-NTIPGVLKFHGLITTFEMIMADCPELKKLHWRCVVIDEA 714

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P  FPS S+F E+F 
Sbjct: 715  HRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPLQFPSESTFLEEFG 774

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 775  DLKTDEQVKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFS 834

Query: 1019 ILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLH 1063
             L    KG  Q +M N++   M+LRK CNHPYLI G E            P+  + +F  
Sbjct: 835  FL---SKGANQHNMPNLINTMMELRKCCNHPYLITGAEEKILESFKKSHSPE--APDFQL 889

Query: 1064 EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
            +  I+A+ KL L+  +L  L   GH+VL+FSQM + LDILEDYL       TYER+DG V
Sbjct: 890  QAMIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDYLIQRR--YTYERIDGRV 947

Query: 1124 SVGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
                RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R 
Sbjct: 948  RGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 1007

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTE 1239
            HRIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E
Sbjct: 1008 HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSKLEVE 1067

Query: 1240 ELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            +L     G  G  M E +   +    D++Q  ++R
Sbjct: 1068 DLLKK--GAYGALMDEEDEGSKFCEEDIDQILQRR 1100


>gi|211853152|gb|AAI68553.1| chd9 protein [Xenopus (Silurana) tropicalis]
          Length = 2753

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 272/669 (40%), Positives = 379/669 (56%), Gaps = 68/669 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDER-------WK 662
            E+ VK+   S +H  W  E QL +  KR   K++ +K +         D         + 
Sbjct: 581  EYYVKYKNYSYLHCEWATEQQL-LKDKRIHQKIKRFKIRQAQRAHFFADMEEELFNSDYI 639

Query: 663  QPQRV--ISLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQ 714
            +  RV  +SL   KD         VKW  LPY++ TWE    +D+  ++++  L      
Sbjct: 640  EVDRVLEVSLCQDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIDEFEQL------ 693

Query: 715  FERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKS 774
               Q LK DA   E P        +    + +  E   G  L  +QLE LNWL   W+  
Sbjct: 694  ---QALKPDARRVERP------PPNSWKKINQSREYKIGNQLREYQLEGLNWLLFNWYNR 744

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
            +N ILADEMGLGKT+ +  F+  +Y   +   P L++ PLST+ NW  EF  W  +LNVV
Sbjct: 745  RNCILADEMGLGKTIQSITFLQEIYLN-RIPGPFLIIAPLSTIANWEREFRTWT-DLNVV 802

Query: 835  EYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
             YHG   +R +I+QYE +  D         SYKF+ ++TT+EMIL     L  + W  ++
Sbjct: 803  VYHGSMISRQMIQQYEMYFRDSQG-RIIWGSYKFHAIITTFEMILGGCPELNAIEWRCVI 861

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
             DE HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F 
Sbjct: 862  FDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPQRFPSESTFM 921

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
            ++F DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L 
Sbjct: 922  QEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILE 981

Query: 1015 KNYQILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEF 1061
            KN+  L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F
Sbjct: 982  KNFAFL---SKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNQMAADF 1038

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
              +  I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG
Sbjct: 1039 YLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLMHKR--YLYERIDG 1096

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  
Sbjct: 1097 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1156

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSG-----SQK 1228
            R HRIGQ+K + VYRL+ R S E  +   A  KL LD+  +       N  G     S+K
Sbjct: 1157 RCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKK 1216

Query: 1229 EVEDILRWG 1237
            E+ED+LR G
Sbjct: 1217 EIEDLLRRG 1225


>gi|45384402|ref|NP_990272.1| chromodomain-helicase-DNA-binding protein 1 [Gallus gallus]
 gi|2501846|gb|AAC60282.1| chromo-helicase-DNA-binding on the Z chromosome protein [Gallus
            gallus]
          Length = 1808

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 280/682 (41%), Positives = 395/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V    KL+NYK K                 Y   
Sbjct: 314  QYLIKWKGWSHIHNTWETEETLKQQNVKGMNKLDNYKKKDQETKRWLKNASPEDVEYYNC 373

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 374  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALIAKKF 430

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 431  QARIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHESLELRDYQLN 484

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L+ VPLST+ +W  
Sbjct: 485  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLRVPLSTLTSWQR 544

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WAP +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 545  EIQTWAPQMNAVVYLGDITSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 597

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            S L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 598  SFLGGLNWAFIGVDEAHRLKNDDSLLYRTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 657

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 658  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 716

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 717  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQE 775

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 776  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 832

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 833  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 892

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 893  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPS 952

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 953  SSTPFNKEELSAILKFGAEELF 974


>gi|326669481|ref|XP_001922536.3| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like [Danio
            rerio]
          Length = 2485

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 262/664 (39%), Positives = 375/664 (56%), Gaps = 61/664 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTTVINICDERWKQPQRV--- 667
            E+ VK+   S +H  W  E QL+     ++K++ +K K         DE    P  V   
Sbjct: 314  EYFVKYKNYSYLHCEWATEQQLEKDKRIQQKIKRFKIKQAQKAHFFADEDPFNPDYVEVD 373

Query: 668  ----ISLRSSKDGTREA---FVKWTGLPYDECTWEKL---DEPALEKYSHLTDLFVQFER 717
                +S    KD         VKW  LPY++ TWE +   D+  +E++  L        R
Sbjct: 374  RVLEVSYCEDKDSGEPVVYYLVKWCSLPYEDSTWELMEDVDQTKIEEFKKLQAAKPHTNR 433

Query: 718  QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNV 777
                  +   +L + +  C ++               +L  +QLE +NWL   W+  +N 
Sbjct: 434  MERPPASHWKKLEKSRKYCNEN---------------SLRDYQLEGVNWLLFNWYNRRNC 478

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y     K P L++ PLST+ NW  EF  W  +LNV+ YH
Sbjct: 479  ILADEMGLGKTIQSITFLEEIY-RTGIKGPFLIIAPLSTIANWEREFRTWT-HLNVIVYH 536

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +++QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 537  GSVVSRQMLQQYEMYCRDSQGRVIR-GAYRFQAVITTFEMILGGCPELNAIDWRCVIIDE 595

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL       S +H+VLLTGTPLQN + E+++LL+FL+P  FPS ++F ++F
Sbjct: 596  AHRLKNKNCKLLEGFKLMSLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSENTFMQEF 655

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 656  GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 715

Query: 1018 QILRNIGKGVAQQS---MLNIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q +   +LN +M+LRK CNHPYLI G E              +V+F  +
Sbjct: 716  SFL---AKGAGQANVPNLLNTMMELRKCCNHPYLIKGAEEKIMEDFKEVYSPAAVDFHLQ 772

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 773  AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 830

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 831  GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 890

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG--------SQKEVEDIL 1234
            RIGQ+K + VYRL+ R S E  +   A  KL LD+ +  + SG        S+KE+ED+L
Sbjct: 891  RIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSLQQLSKKEIEDLL 950

Query: 1235 RWGT 1238
            R G 
Sbjct: 951  RRGA 954


>gi|432114989|gb|ELK36631.1| Chromodomain-helicase-DNA-binding protein 1 [Myotis davidii]
          Length = 1841

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 396/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 356  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 415

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 416  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 472

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 473  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 526

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 527  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFNEHQLYGPFLLVVPLSTLTSWQR 586

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 587  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 639

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 640  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 699

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 700  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 758

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 759  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 817

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 818  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 874

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 875  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 934

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 935  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 994

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 995  SSTPFNKEELSAILKFGAEELF 1016


>gi|326931681|ref|XP_003211955.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like
            [Meleagris gallopavo]
          Length = 2658

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/666 (40%), Positives = 375/666 (56%), Gaps = 61/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ--- 665
            EF VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P    
Sbjct: 310  EFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVE 369

Query: 666  --RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
              R++ +  +KD           VKW  LPY+E TWE  ++    K      L +  E +
Sbjct: 370  VDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIK 429

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             +++ ASE                 L +  E      L  +QLE +NWL   W+  KN I
Sbjct: 430  HMERPASES-------------WQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCI 476

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG
Sbjct: 477  LADEMGLGKTIQSITFLSEIFL-MGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHG 534

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R +I+QYE    D    N     +KF V++TT+EMILAD   L+ + W  +V+DE 
Sbjct: 535  SQISRQMIQQYEMVYRDTQG-NPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEA 593

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P  FPS ++F E+F 
Sbjct: 594  HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFG 653

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAM-QNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
            DL T ++V++L+ ++ P MLRRLK D + +++ PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 654  DLKTEEQVKKLQSILKPMMLRRLKDDVVEESLAPKQETIIEVELTNIQKKYYRAILEKNF 713

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q +M N++   M+LRK CNHPYLI G E              + +F  +
Sbjct: 714  SFL---SKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQ 770

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V 
Sbjct: 771  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVR 828

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 829  GNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 888

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVED 1232
            RIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED
Sbjct: 889  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVED 948

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 949  LLRKGA 954


>gi|239985588|ref|NP_031716.2| chromodomain-helicase-DNA-binding protein 1 [Mus musculus]
 gi|341940536|sp|P40201.3|CHD1_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 1;
            Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1
 gi|109732363|gb|AAI15823.1| Chromodomain helicase DNA binding protein 1 [Mus musculus]
 gi|148688507|gb|EDL20454.1| chromodomain helicase DNA binding protein 1 [Mus musculus]
          Length = 1711

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 277/680 (40%), Positives = 393/680 (57%), Gaps = 69/680 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 315  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 374

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL     
Sbjct: 375  QQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECSWE---DGALISKKF 431

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLEAL 764
             T +   F R   K    +D     K   Q+   VAL +QP  + G     L  +QL  L
Sbjct: 432  QTCIDEYFSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGL 487

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  E 
Sbjct: 488  NWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREI 547

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D + 
Sbjct: 548  QTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDKAF 600

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+ P
Sbjct: 601  LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP 660

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S++
Sbjct: 661  EKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL 719

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVEFL 1062
            Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E L
Sbjct: 720  QKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEAL 778

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+DGS
Sbjct: 779  QHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLDGS 835

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA  R
Sbjct: 836  IKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR 895

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS----- 1226
            AHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS     
Sbjct: 896  AHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSS 955

Query: 1227 ----QKEVEDILRWGTEELF 1242
                ++E+  IL++G EELF
Sbjct: 956  TPFNKEELSAILKFGAEELF 975


>gi|410912244|ref|XP_003969600.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like [Takifugu
            rubripes]
          Length = 2438

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 267/668 (39%), Positives = 375/668 (56%), Gaps = 63/668 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKV--LAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL+     ++K++ +K K     +   D  E    P  V 
Sbjct: 226  EFFVKYKNYSYLHCEWATEQQLEKDKRIQQKIKRFKMKQAQRALLFADMEEEPFNPDYVE 285

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD   E     VKW  LPY++ TWE  D+  L K      L      Q
Sbjct: 286  VDRVLEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDLNKIEEFEQL------Q 339

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
             +K D+   E P        + +    E   E + G  L  +QLE +NWL   W+  +N 
Sbjct: 340  AVKPDSRRMERP-------ATNLWKKMEHSREYRNGNTLRDYQLEGVNWLLFNWYNRRNC 392

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +Y     K P L++ PLST+ NW  EF  W   LN + YH
Sbjct: 393  ILADEMGLGKTIQSITFLEEIY-RMGIKGPFLIIAPLSTIANWEREFRTWT-YLNAIVYH 450

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +++QYE +  D   +N      +   ++TT+EMIL     L  + W  +V+DE
Sbjct: 451  GSMVSRQMLQQYEMYFRD-SQVNIVVVCLQIQAVITTFEMILGGCPELNAIEWRCVVIDE 509

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL       + +H+VLLTGTPLQN + E+++LL+FL+PA FPS ++F ++F
Sbjct: 510  AHRLKNKNCKLLEGFKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEF 569

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 570  GDLKTEEQVQKLQGILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 629

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q +M N+V   M+LRK CNHPYLI G E           +  +V+F  +
Sbjct: 630  SFL---AKGAGQANMPNLVNTMMELRKCCNHPYLIKGAEEKILEDFREVYNPAAVDFHLQ 686

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              ++++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 687  AMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 744

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 745  GNLRQAAIDRFSKPDSERFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 804

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG------------SQKEV 1230
            RIGQ+K + VYRL+ R S E  +   A  KL LD+ +  + SG            S++E+
Sbjct: 805  RIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSLGGAQQQLSKREI 864

Query: 1231 EDILRWGT 1238
            ED+L+ G 
Sbjct: 865  EDLLKRGA 872


>gi|320169022|gb|EFW45921.1| chromodomain-helicase-DNA-binding protein 7 [Capsaspora owczarzaki
            ATCC 30864]
          Length = 2669

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 269/669 (40%), Positives = 377/669 (56%), Gaps = 63/669 (9%)

Query: 607  GKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINI-CDERWKQP- 664
             K +  E+LVK+ G+S  H  W+ E       + +L+    ++ T  I I  DE + Q  
Sbjct: 762  AKTMVLEYLVKYKGRSYRHAKWVTEDAFAT-GEMRLKTMFQRFQTKYIPIDPDEAFNQDY 820

Query: 665  ---QRVISLRSSKDGTRE----AFVKWTGLPYDECTWEKLDEPALE-------KYSHLTD 710
                RVI L    D   +      VKW GL YDE TWE      ++       ++ +  D
Sbjct: 821  LEVDRVIDLIKLYDQESKEHPFVLVKWRGLGYDESTWEPAATVPIQDIIRFQKRFKYTAD 880

Query: 711  LFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKC 770
              V F+R  +                   ++  L  +     G  L  +Q E +NWLR C
Sbjct: 881  CNVMFQRTAV-------------------DLKLLDAKVTFENGNTLRSYQYEGVNWLRFC 921

Query: 771  WHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPN 830
            + + ++ ILADEMGLGKTV +  F+ SL     +  P LV+ PLST+PNW  EFA W  +
Sbjct: 922  YSQCRSCILADEMGLGKTVQSITFLKSLKNATGSG-PFLVIAPLSTLPNWQREFAEWT-D 979

Query: 831  LNVVEYHGCAKARAIIRQYEWHASDPDNLNKK--TSSYKFNVLLTTYEMILADSSHLRGV 888
            LNV+ YHG   AR +I ++E    D   + K        F+ +LTTYE  L     L  +
Sbjct: 980  LNVIVYHGKPLARRVISEFEMFDRDKAGMGKAKLVQHLSFDAILTTYESTLQGVDDLGRI 1039

Query: 889  PWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 948
            PW+ +++DE HR+KN+ ++L   L +F+  H VLLTGTPLQN++ E+++LLNFL P  + 
Sbjct: 1040 PWKCVIIDEAHRMKNAKARLSETLRAFTINHSVLLTGTPLQNHVEELWSLLNFLSPQDYS 1099

Query: 949  SLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEY 1008
            S   F E+F DL T Q+V  L+ L+ P MLRRLK D  ++I PK E ++ VEL+ IQ +Y
Sbjct: 1100 SKKMFLEQFGDLKTEQQVLALQGLLRPIMLRRLKGDVEKSIAPKEETIIEVELTPIQKKY 1159

Query: 1009 YRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE---------PD--SG 1057
            Y+A+L +N++ L          S++NIVM+LRK CNHPYLI G E         P+  S 
Sbjct: 1160 YQAILGRNFEFLAKGCNKNDMPSLMNIVMELRKCCNHPYLIGGAEEKILGEIYGPNFYST 1219

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN-IEFGPKTY 1116
            S   L    I+AS KL L+  +LK L + GH+VLIFSQM + LDIL+DYL  +++    +
Sbjct: 1220 SPATLLLTLIQASGKLVLIDKLLKRLRENGHKVLIFSQMVRCLDILQDYLTAMQY---KF 1276

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            ER+DG +    RQAAI RF++  S  FVFLL TR+ G+GINL  ADTVIIYDSD+NP  D
Sbjct: 1277 ERIDGGIRGEARQAAIDRFSKPGSDSFVFLLCTRAGGVGINLTAADTVIIYDSDWNPQND 1336

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK-------SGSQK 1228
            +QA  R HRIGQ+K + +YRL+ R S E  +   A  KL LDQ  +         + S++
Sbjct: 1337 LQAQARCHRIGQTKSVKIYRLLTRNSYEREMFDKASMKLGLDQAVLQNIQSSDKPTFSKQ 1396

Query: 1229 EVEDILRWG 1237
            E+ED+L+ G
Sbjct: 1397 ELEDLLKKG 1405


>gi|426230150|ref|XP_004009142.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Ovis aries]
          Length = 1710

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 396/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 315  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 374

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 375  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 431

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 432  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 485

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 486  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 545

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 546  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 598

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 599  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 658

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 659  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 717

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 718  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 776

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 777  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 833

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 834  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 893

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 894  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 953

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 954  SSTPFNKEELSAILKFGAEELF 975


>gi|431907923|gb|ELK11530.1| Chromodomain-helicase-DNA-binding protein 1 [Pteropus alecto]
          Length = 1702

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 396/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 221  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 280

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 281  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 337

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 338  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 391

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 392  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 451

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 452  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 504

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 505  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 564

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 565  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 623

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 624  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 682

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 683  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 739

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 740  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 799

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 800  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 859

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 860  SSTPFNKEELSAILKFGAEELF 881


>gi|194855230|ref|XP_001968500.1| GG24470 [Drosophila erecta]
 gi|190660367|gb|EDV57559.1| GG24470 [Drosophila erecta]
          Length = 1886

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 275/685 (40%), Positives = 390/685 (56%), Gaps = 75/685 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            +FL+KW G S IHN+W   + L   K    +KL+N+  K                 Y   
Sbjct: 367  QFLIKWKGWSYIHNTWESVATLRDMKAKGMKKLDNFIKKEQEQAYWRRFAGPEDIDYFEC 426

Query: 653  VINICDERWKQPQRV--ISLRSSK--DGTREAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
             + +  E  K    V  I  + SK  DGT E   KW  LPY E TWE      L K+   
Sbjct: 427  QMELQHELLKSYNNVDRIIAKGSKPDDGTEEYLCKWQSLPYAESTWEDA-ALVLRKWQRC 485

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG-ALFPHQLEA 763
             + F   +R++ K   S          C+    + +   +  QPE L  G  L  +Q++ 
Sbjct: 486  AEQFN--DRESSKCTPSRH--------CRVIKYRPKFSRIKNQPEFLAAGLTLRDYQMDG 535

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LNWL   W K  +VILADEMGLGKT+    F+ SL+       P L +VPLSTM  W  E
Sbjct: 536  LNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKLHHLYGPFLCVVPLSTMTAWQRE 595

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F LWAP++NVV Y G  K+R +I+QYEW       L       KFN +LTTYE++L D  
Sbjct: 596  FDLWAPDMNVVTYLGDIKSRELIQQYEWQFEGSKRL-------KFNCILTTYEIVLKDKQ 648

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+F+ 
Sbjct: 649  FLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIM 708

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            P  F +  +FE +  +    +    L + + P++LRR+KKD  +++P K E+++ VE++S
Sbjct: 709  PDKFDTWDNFEVQHGN-AEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTS 767

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLH 1063
            +Q +YY+ +LTKN+  LR  GK  +  + LNIV++L+K CNH  LI  +E +   ++   
Sbjct: 768  LQKQYYKWILTKNFDALRK-GKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDE 826

Query: 1064 EMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
             ++  +K S KL LL  +L  L + GHRVLIFSQM ++LD+L DYL     P  ++R+DG
Sbjct: 827  ALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFP--FQRLDG 884

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            S+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA  
Sbjct: 885  SIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQA 944

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSG---- 1225
            RAHRIGQ  ++ +YRLV   SVEE+I++ AK+K++LD L +           +KSG    
Sbjct: 945  RAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHS 1004

Query: 1226 ------SQKEVEDILRWGTEELFND 1244
                  ++ ++  IL++G EELF D
Sbjct: 1005 SNSNPFNKDDLSAILKFGAEELFKD 1029


>gi|47228067|emb|CAF97696.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2331

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/596 (42%), Positives = 355/596 (59%), Gaps = 56/596 (9%)

Query: 681  FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ 737
             VKW  LPY++ TWE    +DE  +E++  + +   + +R       S  +L        
Sbjct: 841  LVKWCSLPYEDATWELNEDVDEGKVEEFKKIQNRQPRLKRTPRPSPGSWKKL-------- 892

Query: 738  QSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFIS 796
                    E+  E K    L  +QLE +NWL   W+  +N ILADEMGLGKT+ +   +S
Sbjct: 893  --------EESREYKNANTLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITLLS 944

Query: 797  SLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD- 855
             +Y     + P LV+ PLST+ NW  EF+ W  N+N + YHG   +R +I+QYE +  D 
Sbjct: 945  EIYAA-GVQGPFLVIAPLSTITNWEREFSTWT-NMNAIVYHGSLASRQMIQQYEMYCKDE 1002

Query: 856  PDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSF 915
             D+L     +YKF+ L+TT+EMIL+D   LR + W  +++DE HRLKN   KL   L   
Sbjct: 1003 KDHL--IPGAYKFDALITTFEMILSDCPELREISWRCVIIDEAHRLKNRNCKLLDSLKMM 1060

Query: 916  SFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAP 975
              +H+VLLTGTPLQN + E+++LL+FL+PA FPS   F  +F DL T ++V++L+ ++ P
Sbjct: 1061 DLEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREFGDLKTEEQVQKLQSILKP 1120

Query: 976  HMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQ--SML 1033
             MLRRLK+D  +N+ PK E ++ VEL+ +Q +YYRA+L +N+  L ++G        ++L
Sbjct: 1121 MMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFL-SLGANSNSNVPNLL 1179

Query: 1034 NIVMQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIKASAKLTLLHSMLKVL 1083
            N +M+LRK CNHPYLI G E           D  + +F  +  I+++ KL LL  +L  L
Sbjct: 1180 NTMMELRKCCNHPYLINGAEEKIVAELREVYDPSAPDFHLQALIRSAGKLVLLDKLLPRL 1239

Query: 1084 YKEGHRVLIFSQMTKLLDILEDYL-NIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSR 1141
               GH+VLIFSQM + LDILEDYL N  +    YER+DG V    RQAAI RF++ D  R
Sbjct: 1240 KAGGHKVLIFSQMVRCLDILEDYLINKRY---LYERIDGRVRGNLRQAAIDRFSKPDSDR 1296

Query: 1142 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRAS 1201
            FVFLL TR+ GLGINL  ADT +I+DSD+NP  D+QA  R HRIGQSK + VYRL+ R S
Sbjct: 1297 FVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNS 1356

Query: 1202 VEERILQLAKKKLMLDQLFV---------NKSG----SQKEVEDILRWGTEELFND 1244
             E  +L  A  KL LD+  +         N +G    S+KE+ED+LR G      D
Sbjct: 1357 YEREMLDKASLKLGLDRAVLQSMSGNKDSNVNGIQQFSKKEIEDLLRKGAYAAIMD 1412


>gi|417515818|gb|JAA53717.1| chromodomain helicase DNA binding protein 1 [Sus scrofa]
          Length = 1706

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 396/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 311  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 370

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 371  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 427

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 428  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 481

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 482  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 541

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 542  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 594

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 595  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 654

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 655  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 713

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 714  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 772

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 773  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 829

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 830  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 889

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 890  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 949

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 950  SSTPFNKEELSAILKFGAEELF 971


>gi|301768523|ref|XP_002919680.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
            [Ailuropoda melanoleuca]
          Length = 1742

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 396/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 347  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 406

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 407  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 463

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 464  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHESLELRDYQLN 517

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 518  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 577

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 578  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 630

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 631  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 690

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 691  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 749

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 750  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 808

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 809  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 865

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 866  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 925

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 926  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 985

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 986  SSTPFNKEELSAILKFGAEELF 1007


>gi|118343651|ref|NP_001071646.1| chromo-helicase DNA-binding protein [Taeniopygia guttata]
 gi|28975391|gb|AAO61781.1| chromo-helicase DNA-binding protein [Taeniopygia guttata]
 gi|28975393|gb|AAO61782.1| chromo-helicase DNA-binding protein [Taeniopygia guttata]
          Length = 1786

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 280/686 (40%), Positives = 398/686 (58%), Gaps = 81/686 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 299  QYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 358

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 359  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALIAKKF 415

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDC----QQSEIVALTEQPEELKGGA---LFP 758
                D +  F R   K    +D        C    Q+   VAL +QP  + G     L  
Sbjct: 416  QTCIDEY--FSRNQSKTTPFKD--------CKILKQRPRFVALKKQPSYIGGHEGLELRD 465

Query: 759  HQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
            +QL  LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ 
Sbjct: 466  YQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNHLFHEHQLYGPFLLVVPLSTLT 525

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
            +W  E   WAP +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++
Sbjct: 526  SWQREIQTWAPQMNAVVYLGDITSRNMIRTHEW-------MHPQTKRLKFNILLTTYEIL 578

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            L D S L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ ++++L
Sbjct: 579  LKDKSFLGGLNWVFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKKLWSL 638

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            L+F+ P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ 
Sbjct: 639  LHFIMPEKFSSWEDFEEEHGK-GREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILR 697

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDS 1056
            +E+S++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P      
Sbjct: 698  MEMSALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDDNEFY 756

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
               E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  +
Sbjct: 757  NKQEALQHL-IRSSGKLILLDKLLIRLRECGNRVLIFSQMVRMLDILAEYLKYRQFP--F 813

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            +R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D
Sbjct: 814  QRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQND 873

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SG 1225
            +QA  RAHRIGQ K++ +YRLV +ASVEE IL+ AKKK++LD L + +          +G
Sbjct: 874  LQAQARAHRIGQKKQVNIYRLVTKASVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTG 933

Query: 1226 S---------QKEVEDILRWGTEELF 1242
            S         ++E+  IL++G EELF
Sbjct: 934  STPSSSTPFNKEELSAILKFGAEELF 959


>gi|189189128|ref|XP_001930903.1| chromo domain-containing protein 1 [Pyrenophora tritici-repentis
            Pt-1C-BFP]
 gi|187972509|gb|EDU40008.1| chromo domain-containing protein 1 [Pyrenophora tritici-repentis
            Pt-1C-BFP]
          Length = 1570

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 273/662 (41%), Positives = 378/662 (57%), Gaps = 65/662 (9%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLKVLAK----RKLENY------------------KAKY 649
            +E+L+KW  K++ H+SW      K  A     RKL+NY                    ++
Sbjct: 283  FEYLIKWQDKAHYHSSW---EDYKTAASYKGYRKLDNYFKGPVSSDMYFHSRKDEDPEEF 339

Query: 650  GTTVINICDERWKQ-----PQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEK 704
               ++    ER  Q      +RVI  R  +D T + FVKW GL Y+ CTWE     +   
Sbjct: 340  EQHMVAREAERESQLDFHVVERVIDSRDGEDET-DYFVKWKGLTYEFCTWEPASLVSRLS 398

Query: 705  YSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEAL 764
             S + D F+         D  E           + + V L  QP+ +K G L   QL+ +
Sbjct: 399  QSEI-DRFLDRSSNRPSSDLRE------TNPNTRRKFVKLDAQPDYIKYGQLRSFQLQGV 451

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            N+L   W +  NVILADEMGLGKTV   +FI+ L  +     P + +VPLSTMP W   F
Sbjct: 452  NFLAHNWCRGTNVILADEMGLGKTVQTVSFINWLRHDRHQDGPMICVVPLSTMPAWADTF 511

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              W P++N V Y G  +ARAIIR  E        ++  T   KFNVLLTTYE +LAD   
Sbjct: 512  NNWTPDVNYVIYTGREEARAIIRDKELL------VDGNTKKIKFNVLLTTYEYVLADWQF 565

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L+ + W+ L VDE HRLKN  S+L+  L  F+   R+L+TGTP+QN +GE+  L++FL P
Sbjct: 566  LQSIKWQFLAVDEAHRLKNRDSQLYDRLRQFNAPCRLLITGTPIQNTLGELAALMDFLMP 625

Query: 945  ASFPSLSSFEEKFNDLTT---TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
                   S +E   DL +   ++K+ EL   + P+M+RR K+    ++PPK+E+++ VEL
Sbjct: 626  GKI----SVDEHV-DLASEDASRKLAELSDAIQPYMIRRTKEKVENDLPPKSEKILRVEL 680

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE-----PDS 1056
            S IQ EYY+ +LT+NY+ L   G G  +QS+LNIVM+L+K  NH  L P  E     P S
Sbjct: 681  SDIQLEYYKNILTRNYEALNEGGVG-HKQSLLNIVMELKKASNHALLFPNAENKLVKPGS 739

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
               E L  + I +S K+ LL  +L  L  +GHRVLIFSQM  +LDIL DYL +     ++
Sbjct: 740  SKEETLKAL-ITSSGKMMLLDRLLGKLKADGHRVLIFSQMVHMLDILTDYLKLRN--YSF 796

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            +R+DG+V   DR+ AI  FN   S  + FLLSTR+ GLGINL TADTV+I+DSD+NP AD
Sbjct: 797  QRLDGTVPAADRKIAIDHFNAPGSEDYCFLLSTRAGGLGINLMTADTVVIFDSDWNPQAD 856

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS---QKEVED 1232
            +QAM RAHRIGQ K + VYRLV + ++EE IL+ A+ K ML+ + + +  +   QKE+ D
Sbjct: 857  LQAMARAHRIGQQKPVSVYRLVSKDTIEEEILERARNKRMLEFITIQRGVTDRQQKELND 916

Query: 1233 IL 1234
             +
Sbjct: 917  KM 918


>gi|149726480|ref|XP_001504655.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Equus
            caballus]
          Length = 1713

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 396/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 318  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 377

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 378  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 434

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 435  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 488

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 489  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 548

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 549  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 601

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 602  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 661

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 662  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 720

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 721  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 779

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 780  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 836

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 837  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 896

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 897  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 956

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 957  SSTPFNKEELSAILKFGAEELF 978


>gi|432863455|ref|XP_004070075.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Oryzias
            latipes]
          Length = 1814

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 275/735 (37%), Positives = 415/735 (56%), Gaps = 94/735 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPE---SQLKVLAKRKLENYKAK---YGTTVINICDE------- 659
            ++L+KW G S IH++W      +Q KV   +K++N+K K       +   C E       
Sbjct: 327  QYLIKWKGWSYIHSTWESMDSLTQQKVKGLKKMDNFKKKSEEMNAWLRRACPEDIEFHNC 386

Query: 660  ----------RWKQPQRVISLRSSKD-GTR--------------EAFVKWTGLPYDECTW 694
                      +++  +RVI+ ++ K  GT               E   KW GLPY EC+W
Sbjct: 387  QQELMADLNKQFQIVERVIATKTGKTAGTSDFPSHSHKTSSDEPEYLCKWMGLPYSECSW 446

Query: 695  EKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDC----QQSEIVALTEQPEE 750
            E      ++K+    D F    R + K   S+        DC    Q+   VAL +QP  
Sbjct: 447  ED-GALVMKKFQRCIDSFTS--RNSSKTVPSK--------DCKVLKQRPRFVALKKQPTY 495

Query: 751  L--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPC 808
            +  +   L  +QL+ LNWL   W +  +VILADEMGLGKT+   +F+S L+ + +   P 
Sbjct: 496  IGDENLELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPF 555

Query: 809  LVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKF 868
            L++VPLST+ +W  EF  WAP++NVV Y G   +R  IR YEW       +N +T   +F
Sbjct: 556  LLVVPLSTLTSWQREFETWAPDMNVVVYIGDVMSRKTIRDYEW-------VNHQTKRIRF 608

Query: 869  NVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPL 928
            N L+TTYE++L D   L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPL
Sbjct: 609  NALITTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLMEFRSNHRLLITGTPL 668

Query: 929  QNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQN 988
            QN++ E+++LL+FL P  F S   FE++          + L K++ P +LRR+KKD  ++
Sbjct: 669  QNSLKELWSLLHFLMPDKFDSWEDFEDEHGK-GRDNGYQSLHKVLEPFLLRRVKKDVEKS 727

Query: 989  IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYL 1048
            +P K E+++ V++++ Q ++Y+ +LT+NY+ L    +G +    LNIVM+L+K CNH +L
Sbjct: 728  LPAKVEQILRVDMTAQQKQFYKWILTRNYKALSKGTRG-SSSGFLNIVMELKKCCNHCFL 786

Query: 1049 IPGTEPDSGSVEFLHEMR---IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILED 1105
            I   +P+ G  E   ++    ++ S KL LL  +L  L + G+RVLIFSQM ++LDIL  
Sbjct: 787  I--KQPEDGDGEVQQDVLQGVVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAK 844

Query: 1106 YLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVI 1164
            YL  +  P  ++R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+
Sbjct: 845  YLTKKRFP--FQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVV 902

Query: 1165 IYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK- 1223
            I+DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L + + 
Sbjct: 903  IFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRM 962

Query: 1224 -----------SG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                       SG       +++E+  IL++G E+LF ++    G++       I+E +R
Sbjct: 963  DTTGRTVLDSNSGNTNSNPFNKEELTAILKFGAEDLFKEA---EGEESEPQEMDIDEILR 1019

Query: 1266 DLEQKHRKRGGGLGD 1280
              E +   +G    D
Sbjct: 1020 LAETRESDQGSSATD 1034


>gi|73951996|ref|XP_848459.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1 isoform 2
            [Canis lupus familiaris]
          Length = 1711

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 396/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 316  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 375

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 376  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 432

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 433  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHESLELRDYQLN 486

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 487  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 546

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 547  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 599

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 600  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 659

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 660  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 718

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 719  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 777

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 778  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 834

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 835  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 894

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 895  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 954

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 955  SSTPFNKEELSAILKFGAEELF 976


>gi|410949042|ref|XP_003981233.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 1 [Felis catus]
          Length = 1799

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 396/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 316  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 375

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 376  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 432

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 433  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHESLELRDYQLN 486

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 487  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 546

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 547  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 599

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 600  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 659

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 660  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 718

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 719  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 777

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 778  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 834

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 835  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 894

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 895  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 954

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 955  SSTPFNKEELSAILKFGAEELF 976


>gi|332256287|ref|XP_003277252.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Nomascus
            leucogenys]
          Length = 1702

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 395/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 317  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 376

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 377  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 433

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 434  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 487

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 488  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 547

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW        + +T   KFN+LLTTYE++L D 
Sbjct: 548  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------THHQTKRLKFNILLTTYEILLKDK 600

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 601  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 660

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 661  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 719

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 720  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 778

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 779  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 835

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 836  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 895

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 896  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 955

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 956  SSTPFNKEELSAILKFGAEELF 977


>gi|123474505|ref|XP_001320435.1| SNF2 family N-terminal domain containing protein [Trichomonas
            vaginalis G3]
 gi|121903240|gb|EAY08212.1| SNF2 family N-terminal domain containing protein [Trichomonas
            vaginalis G3]
          Length = 1497

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 268/676 (39%), Positives = 391/676 (57%), Gaps = 61/676 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVL-----AKRKLENYKAKYGTT-VINICD-------- 658
            E+ VK++ K+ IH  W+   ++K L     A  + EN   K+  +  ++I D        
Sbjct: 137  EYYVKFLDKAYIHCQWLKAKEIKELEGGENALTRFENKCQKFILSPSVSIGDLLTFEDQE 196

Query: 659  --ERWKQPQRVISLRSS-KDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQF 715
              + W Q  R+I  +   +D   E  VKW GL YDE TWEK +E  +++   +       
Sbjct: 197  INQVWFQIDRIIDEKGDLEDNDLEYLVKWKGLEYDEATWEKAEE--IKEKDKIK------ 248

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSK 775
            E Q   K A+  ++P         E   L E P+      L  +QL+ LNWLR CW+  +
Sbjct: 249  EYQEHLKIANPKKIPSRWKRPSAKEFKELEESPKSKHNYELRDYQLKGLNWLRFCWYNKR 308

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT    + + SL      + P LV+ PLST+P+W  EF  W+ +LN + 
Sbjct: 309  NNILADEMGLGKTAQTVSMLESLRKYENVRGPFLVMAPLSTLPHWRNEFEEWS-SLNTIV 367

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKK----TSSYKFNVLLTTYEMILADSSHLRGVPWE 891
            YHG A  R +IR+ E++      LN K     +  +F+VL+T YE +L D +    + W 
Sbjct: 368  YHGNADCRELIRRSEFNC-----LNSKGKIIPNCVQFDVLVTNYETVLQDFNVFADIEWR 422

Query: 892  VLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN--FLQPASFPS 949
             ++ DE H+LKNS  KL+  + + +F+H  +LTGTP+QNN+ E++ LL+  F+   +F +
Sbjct: 423  YIIFDEAHKLKNSKGKLYKKVETLTFEHCTMLTGTPIQNNMEELWGLLHILFIDQPNFFT 482

Query: 950  LSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYY 1009
            L  F EK+ ++T + +V+ ++KL+ P MLRR K D  Q+I  K E +V VEL+  Q ++Y
Sbjct: 483  LEEFNEKYGNMTDSAQVKSIQKLIKPLMLRRKKSDVEQSIAAKEETIVRVELTRTQKKFY 542

Query: 1010 RAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLH------ 1063
            RA+L++N   L     G A  ++ NI MQLRKVCNHPYL+   E D+   E +       
Sbjct: 543  RALLSENASTLLEQITGSAANNLQNIAMQLRKVCNHPYLLKNAE-DTEVKERMADPANKG 601

Query: 1064 --------EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKT 1115
                    E  +++S K+  +  +L  L ++GH+VLIFSQM ++L I+  +L  E     
Sbjct: 602  KSRDQIELEGLVESSGKMVFISKLLPRLKEQGHKVLIFSQMVRVLGIISIFL--EANQYK 659

Query: 1116 YERVDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            YER+DGSV+  DRQAAI RFNQD   FVFLLST++ G+GINL  A+TVIIYDSD+NP  D
Sbjct: 660  YERLDGSVNDNDRQAAIDRFNQDPEAFVFLLSTKAGGVGINLTAANTVIIYDSDWNPQND 719

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN-------KSGSQK 1228
            IQA  R HRIGQ++++ VYRLV RA+ EE++ + A KKL LD + ++       K    K
Sbjct: 720  IQAEARCHRIGQTQKVKVYRLVTRATYEEKMYERASKKLGLDHVVLDGGDMSKEKPMKAK 779

Query: 1229 EVEDILRWGTEELFND 1244
            E+E++LR G   +FND
Sbjct: 780  EIEEMLRNGVVNIFND 795


>gi|402872166|ref|XP_003900003.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 1 [Papio anubis]
          Length = 1801

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 395/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 320  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 379

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 380  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 436

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 437  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 490

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 491  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 550

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW        + +T   KFN+LLTTYE++L D 
Sbjct: 551  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------THHQTKRLKFNILLTTYEILLKDK 603

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 604  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 663

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 664  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 722

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 723  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 781

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 782  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 838

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 839  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 898

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 899  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 958

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 959  SSTPFNKEELSAILKFGAEELF 980


>gi|345798529|ref|XP_003434456.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Canis lupus
            familiaris]
          Length = 1711

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 396/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 316  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 375

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 376  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 432

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 433  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHESLELRDYQLN 486

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 487  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 546

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 547  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 599

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 600  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 659

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 660  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 718

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 719  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 777

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 778  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 834

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 835  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 894

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 895  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 954

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 955  SSTPFNKEELSAILKFGAEELF 976


>gi|281350318|gb|EFB25902.1| hypothetical protein PANDA_008326 [Ailuropoda melanoleuca]
          Length = 1566

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 396/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 171  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 230

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 231  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 287

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 288  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHESLELRDYQLN 341

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 342  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 401

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 402  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 454

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 455  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 514

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 515  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 573

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 574  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 632

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 633  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 689

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 690  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 749

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 750  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 809

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 810  SSTPFNKEELSAILKFGAEELF 831


>gi|358342312|dbj|GAA40958.2| chromodomain-helicase-DNA-binding protein 1 [Clonorchis sinensis]
          Length = 1728

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 276/726 (38%), Positives = 409/726 (56%), Gaps = 93/726 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK-------VLAKRKLENYKA-------------KYGTT 652
            +FL+KW   S+IH++W  E+ LK       V   +KL  Y+A             +    
Sbjct: 282  QFLIKWRNWSHIHSTWETEASLKSPERGCPVYGFKKLAAYQALLKEKEENMRFAEREDLE 341

Query: 653  VINICDERWKQ-------PQRVISL-RSSKDGTREAFVKWTGLPYDECTWEK------LD 698
             +   +ER +Q        +R+++  R  +  T +  +KW  L Y  C+WE       L 
Sbjct: 342  TMAYEEERNEQILSDKMQVERIVAHSRDPETNTFDYLIKWCRLDYRFCSWESGKVVRALY 401

Query: 699  EPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQS--EIVALTEQPEEL---KG 753
             PA+E Y               +      ELP  K +   +  +   LTEQP+ L   + 
Sbjct: 402  LPAVESY---------------EARCRSIELPNSKCEVLHTRPKFAPLTEQPDYLGDSRD 446

Query: 754  GALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVP 813
              L  +QLE +NW+ + W ++ +VILADEMGLGKT+    F+S L+ E+K   P L++VP
Sbjct: 447  LKLRDYQLEGINWMLRAWCRNNSVILADEMGLGKTIQTIGFLSCLFHEYKLYGPFLIVVP 506

Query: 814  LSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLT 873
            LST+ +W  E  LWAP +N + Y G   +R +IR++EW A      +++    KFNV +T
Sbjct: 507  LSTVSSWQKELQLWAPRMNALIYTGDHVSRQLIREHEWSAGSSGG-SRRQQVLKFNVCIT 565

Query: 874  TYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIG 933
            TYE++L D S L  V W  L VDE HRLKN  S+L+  L +F    R+L+TGTPLQN + 
Sbjct: 566  TYEILLKDKSWLGQVSWAFLGVDEAHRLKNDASQLYKTLKTFDTNTRLLITGTPLQNTMK 625

Query: 934  EMYNLLNFLQPASFPSLSSFEEKFN-------DLTTTQKVEELKKLVAPHMLRRLKKDAM 986
            E++ LL+F+ P  FP    FE  ++            +    L K + P +LRR+KKD  
Sbjct: 626  ELWALLHFIMPERFPVWEEFEGSYSVAEDDPAARVDGEAFHHLHKALRPFLLRRVKKDVE 685

Query: 987  QNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHP 1046
             ++P K ER++ V+++  QA  YR +L +NY  L  + +G  + S +NIVM+L+K CNH 
Sbjct: 686  SSLPEKIERILRVDMTKEQANIYRLILARNYDGLMKVTRG-HKASFINIVMELKKCCNHA 744

Query: 1047 YLI-PGTEPDS---GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDI 1102
            +LI P  E D     + E+L  + I+ S K+TLL  +L+ L  +GHRVLIFSQM ++LD+
Sbjct: 745  HLIAPPQENDKRLWTNDEYLWSL-IRGSGKMTLLDKLLQRLKPKGHRVLIFSQMVRMLDL 803

Query: 1103 LEDYLNIE-FGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATA 1160
            + DYL +  +G   ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLATA
Sbjct: 804  ISDYLTLRGWG---FQRLDGSIRGALRKQALDHFNADGSTDFCFLLSTRAGGLGINLATA 860

Query: 1161 DTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF 1220
            DTVII+DSD+NP  D+QA  RAHRIGQ+K++ VYRLV + SVEE+I++ A +K++LD L 
Sbjct: 861  DTVIIFDSDWNPQNDLQAQARAHRIGQTKQVSVYRLVTQESVEEKIIESATRKMVLDHLV 920

Query: 1221 VNK----------SGSQKE------VEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            + +          +G + E      + +ILR+G E LFN     N +D+ E    I++ +
Sbjct: 921  IQRMDSAGGSRSAAGRKGETSKGQLLTEILRYGAEGLFNR----NDEDVAELEVDIDDIL 976

Query: 1265 RDLEQK 1270
               E +
Sbjct: 977  NRAETR 982


>gi|109078102|ref|XP_001097125.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Macaca
            mulatta]
          Length = 1712

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 395/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 319  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 378

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 379  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 435

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 436  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 489

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 490  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 549

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW        + +T   KFN+LLTTYE++L D 
Sbjct: 550  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------THHQTKRLKFNILLTTYEILLKDK 602

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 603  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 662

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 663  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 721

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 722  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 780

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 781  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 837

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 838  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 897

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 898  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 957

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 958  SSTPFNKEELSAILKFGAEELF 979


>gi|427794015|gb|JAA62459.1| Putative chromatin remodeling complex swi/snf component swi2, partial
            [Rhipicephalus pulchellus]
          Length = 1939

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 273/688 (39%), Positives = 400/688 (58%), Gaps = 80/688 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S++HN+W     L   KV   +KLENY  +                 Y   
Sbjct: 358  QYLIKWKGWSHLHNTWESMQTLQEQKVKGLKKLENYMKREDELRNWRDNASPEDVEYYEC 417

Query: 653  VINICDE---RWKQPQRVISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYS 706
               + +E   +  + +R+IS   +K G  E      KW GLPY +CTWE  +     K+ 
Sbjct: 418  QQELSEELQFKHMEVERIISHAPAKSGEAEQMDYLCKWDGLPYSDCTWEDGNL-IKRKFQ 476

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGGA---LFPH 759
            H+ D +    RQ  +K  S+         C+    + +   L  QP  + G     L  +
Sbjct: 477  HVIDQY--HARQKSQKIPSKV--------CKVLKVRPKFSPLKTQPSYIGGPQKLELRDY 526

Query: 760  QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPN 819
            QLE LNWL   W K   VILADEMGLGKT+   +F++ L+       P L++VPLST+ +
Sbjct: 527  QLEGLNWLANSWCKENGVILADEMGLGKTIQTISFLTYLFNHHALYGPFLLVVPLSTLAS 586

Query: 820  WLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMIL 879
            W  EFA W+P++NVV Y G   +R++IR++EW    P N        KFN +LTTYE++L
Sbjct: 587  WQKEFAQWSPDMNVVVYLGDVSSRSMIREHEW--CHPGN-----KRLKFNAVLTTYEILL 639

Query: 880  ADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLL 939
             D   L  V W VL VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL
Sbjct: 640  KDKGFLGNVSWAVLGVDEAHRLKNDDSLLYKSLFEFDTNHRLLITGTPLQNSLKELWALL 699

Query: 940  NFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPV 999
            +F+ P  F S   FE +  + +  +   +L K + P +LRR+KKD  +++P K ER++ V
Sbjct: 700  HFIMPQKFDSWEDFEAEHKE-SADKGYTKLHKQLEPFLLRRVKKDVEKSLPAKVERILRV 758

Query: 1000 ELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI-PGTEPDSGS 1058
            E++++Q +YY+ +LTKNY+ L    KG +Q   +NI+M+L+K CNH  LI P   P++  
Sbjct: 759  EMTTVQKQYYKWILTKNYKALSKGLKG-SQSGFINIMMELKKCCNHAMLIRPPDNPNN-- 815

Query: 1059 VEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
            ++ L ++ I+ S KL LL  +L  L + GHRVL+FSQM ++LDI+ DYL +   P  ++R
Sbjct: 816  LDALQQI-IRGSGKLLLLDKLLCRLRETGHRVLVFSQMVRMLDIIADYLQLRRFP--FQR 872

Query: 1119 VDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DGS+    R+ A+  FN D S+ F FLLSTR+ GLGINLATADTV+I+DSD+NP  D+Q
Sbjct: 873  LDGSIKGELRRQALDHFNADASQDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQ 932

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS----------- 1226
            A  RAHRIGQ  ++ +YRLV + SVEE I++ AK+K++LD L + +  +           
Sbjct: 933  AQARAHRIGQKNQVNIYRLVTKNSVEEDIIERAKRKMVLDHLVIQRMDTTGRTVLSKSNA 992

Query: 1227 ---------QKEVEDILRWGTEELFNDS 1245
                     ++E+  IL++G EELF ++
Sbjct: 993  PSSNTTPFNKEELAAILKFGAEELFKET 1020


>gi|407040391|gb|EKE40105.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
            nuttalli P19]
          Length = 1243

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 269/677 (39%), Positives = 390/677 (57%), Gaps = 78/677 (11%)

Query: 613  EFLVKWVGKSNIHNSWIP-ESQLKVLAKRKLENY-------------KAKYGTTVINI-- 656
            EF +KW+  S  HN+WI  E  +++    K++N+               K     IN+  
Sbjct: 197  EFEIKWMNFSYRHNTWINFEESIEMKGVLKVKNFIKNLKKQAELYIGAPKEDIEAINVEM 256

Query: 657  -----CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKL-------DEPALEK 704
                   E +K  +R+I  +   D     FVKW GL Y EC+WEK        D   +EK
Sbjct: 257  ESQKEVIEGYKNVERIIDEQEGPDKQLMYFVKWVGLQYGECSWEKESDLREENDLKEIEK 316

Query: 705  YSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEAL 764
            Y      + + +R T         LPR        + +   E PE      L  +Q+E +
Sbjct: 317  YHKRIKEWEEKKRST--------PLPR--------KFIKFVEGPE--VKNKLRDYQIEGV 358

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NW+   + ++ NVILADEMGLGKTV    FI  LY  +    P LV+VPLST+ NW  EF
Sbjct: 359  NWITYAFSQNTNVILADEMGLGKTVQTITFIKHLYDNYNIIGPFLVIVPLSTISNWSKEF 418

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WAP LN V Y G  ++RAIIR+ E   +       K  + KFNVLLT++E+++ D   
Sbjct: 419  NKWAPKLNCVVYTGDGESRAIIRKTEMFGN-------KKGTIKFNVLLTSFELVIKDQDV 471

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
                 W+  VVDE HRLKN+  +L+ +L   + ++++L+TGTPLQN + E+++LL+FL P
Sbjct: 472  FNQFHWKYTVVDEAHRLKNNEGQLYEVLMRTTTENKLLITGTPLQNTLKELWSLLHFLHP 531

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F S   FE+ ++ +  T+++ ++   + P++LRR+KKD  +++PPK ER++ VELS I
Sbjct: 532  KKFISFEEFEKTYS-VEGTEEINKIHNELKPYLLRRMKKDVEKSLPPKKERILRVELSPI 590

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQ--SMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL 1062
            Q +YYR ++TKN   L+   K V QQ  S++NI M+L+K+CNHP LI             
Sbjct: 591  QKQYYRWIITKNSDALK---KAVQQQKTSLMNICMELKKLCNHPILINELMNSENE---- 643

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
             E  I++  K+ LL  +L  L + GHRVLIFSQM ++LD+L +YL+  F    Y+R+DG+
Sbjct: 644  -ENLIQSCGKMILLDKLLVKLKETGHRVLIFSQMVRMLDVLSNYLH--FRGFNYQRLDGA 700

Query: 1123 VSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    RQ A+  FN +D + FVFLLSTR+ GLGINL TADTVIIYDSD+NP  D+QA  R
Sbjct: 701  MGREARQRAMDHFNAKDSTDFVFLLSTRAGGLGINLTTADTVIIYDSDWNPQNDLQAQAR 760

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN-------KSGSQ----KEV 1230
             HRIGQ K + +YRL    ++EE+IL  AKKKL+LD L +        K+G++     E+
Sbjct: 761  CHRIGQEKTVNIYRLATEGTIEEKILLSAKKKLVLDHLIIQTMEKKGKKNGNELFDKSEL 820

Query: 1231 EDILRWGTEELFNDSPG 1247
            + IL++G +++FN   G
Sbjct: 821  QKILQFGAQDIFNKDNG 837


>gi|354486302|ref|XP_003505320.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Cricetulus
            griseus]
 gi|344249390|gb|EGW05494.1| Chromodomain-helicase-DNA-binding protein 1 [Cricetulus griseus]
          Length = 1710

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 396/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 315  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 374

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 375  QQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECSWE---DGALISKKF 431

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 432  QSCIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 485

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 486  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 545

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 546  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHLQTKRLKFNILLTTYEILLKDK 598

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 599  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 658

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 659  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 717

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 718  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 776

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 777  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 833

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 834  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 893

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 894  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 953

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 954  SSTPFNKEELSAILKFGAEELF 975


>gi|353227245|emb|CCA77762.1| probable CHD1-transcriptional regulator [Piriformospora indica DSM
            11827]
          Length = 1415

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/679 (39%), Positives = 391/679 (57%), Gaps = 72/679 (10%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVL-AKRKLENY-KAKYGTTV-INICD------------ 658
            F +KW G S++HN+      LK     ++++NY KA+      +N+ D            
Sbjct: 222  FHIKWKGYSHLHNTDELYDFLKQYKGIKRVDNYIKAQQAMLREVNMGDLEEVESYKIYRE 281

Query: 659  ------ERWKQPQRVISLRSSKD------GTREAFVKWTGLPYDECTWEKLDEPALEKYS 706
                  E+ K  +RVI+ R+  D         E F KW    YD  TWEKLD+       
Sbjct: 282  RQKEALEKLKVVERVIAERTRPDEIDSSKQVPEYFCKWYNQGYDAATWEKLDD------- 334

Query: 707  HLTDLFVQFERQTLKKDASEDELP---RGKGDCQQSEIVALTEQPEELK--GGALFPHQL 761
                   + + ++ +K  + +  P   R      + +   +T+ P+ +   GG L   QL
Sbjct: 335  --IKSIAREQIESFRKRETNELYPYRSRNYPVHGRPKWTKITQDPDYIARTGGELKDFQL 392

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
              LNWL   WH   N +LADEMGLGKTV   AF+S L+   +   P LV+VPLST+  W 
Sbjct: 393  TGLNWLAFLWHHGDNGVLADEMGLGKTVQTVAFLSYLFHAQQQYGPFLVVVPLSTITAWQ 452

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
            ++FA WAP+LNVV Y G A AR +IR+YE+ A+ P  +       K NV+LTTYEM+L D
Sbjct: 453  SQFAYWAPDLNVVCYMGSAPAREVIREYEFGANFPKRI-------KANVVLTTYEMVLKD 505

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
            +  ++ + W+ + VDE HRLKNS S+L+  L   S   ++L+TGTPLQNN+ E+  L++F
Sbjct: 506  AVEMQAIRWQCIAVDEAHRLKNSESQLYQALTGCSAASKLLITGTPLQNNVKELLALMHF 565

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L P  F   S+FE   ND     K++EL K +  +MLRR+K + ++++P KTER++ VEL
Sbjct: 566  LMPDKFSLASNFE--LNDPDQESKIKELHKDLEKYMLRRMKAEVIKSLPTKTERILRVEL 623

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF 1061
            S+ QA  Y+ +LT+N+  L     G    S+LNI M+ +K  NHP+L  G E  + + E 
Sbjct: 624  SATQANLYKNILTRNFAALAK--GGTTNISLLNIAMECKKAANHPFLFEGVEQPAENKEE 681

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
              +  + +S KL LL  +L  L  +GHRVLIFSQM ++L+IL DY+ +      ++R+DG
Sbjct: 682  AFKNLLMSSGKLVLLDKLLARLKADGHRVLIFSQMVRMLNILSDYMALR--GYIFQRLDG 739

Query: 1122 SVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            +VS   R+ +I  FN   S  F FLLSTR+ GLGINL TADTVIIYDSD+NP  D+QAM 
Sbjct: 740  NVSSDMRKKSIEHFNAPGSPDFAFLLSTRAGGLGINLETADTVIIYDSDWNPQNDLQAMA 799

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK--------SGSQ----- 1227
            RAHRIGQ   + VYRLV + ++EE IL+ AKKK++L+   +N+        SGS+     
Sbjct: 800  RAHRIGQKAHVNVYRLVSKDTMEEDILERAKKKMVLEYAIINQMDTSHNHLSGSKTQKAE 859

Query: 1228 ----KEVEDILRWGTEELF 1242
                +E+  IL++G + +F
Sbjct: 860  KPSNQELSAILKYGAQNMF 878


>gi|351704453|gb|EHB07372.1| Chromodomain-helicase-DNA-binding protein 1 [Heterocephalus glaber]
          Length = 1719

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 396/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 324  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 383

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 384  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 440

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 441  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 494

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 495  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 554

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 555  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 607

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 608  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 667

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 668  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 726

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 727  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 785

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 786  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 842

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 843  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 902

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 903  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 962

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 963  SSTPFNKEELSAILKFGAEELF 984


>gi|2645429|gb|AAB87381.1| CHD1 [Homo sapiens]
          Length = 1709

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 395/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 317  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 376

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 377  QQELTDDLHKQYQIVGRIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 433

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 434  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 487

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 488  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 547

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW        + +T   KFN+LLTTYE++L D 
Sbjct: 548  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------THHQTKRLKFNILLTTYEILLKDK 600

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 601  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 660

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 661  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 719

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 720  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 778

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 779  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 835

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 836  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 895

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 896  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 955

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 956  SSTPFNKEELSAILKFGAEELF 977


>gi|258570209|ref|XP_002543908.1| CHD1 protein [Uncinocarpus reesii 1704]
 gi|237904178|gb|EEP78579.1| CHD1 protein [Uncinocarpus reesii 1704]
          Length = 1358

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 267/654 (40%), Positives = 383/654 (58%), Gaps = 54/654 (8%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKY---GTTVINICD------ERW 661
            +EF +KW G+S+ H +W   ES +   + R+L+NY  K      + IN  D      E+W
Sbjct: 300  FEFYIKWQGRSHYHATWETDESLVGCRSTRRLDNYVRKVLVQEVSFINNLDLAPEEKEKW 359

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                          K  +RVI  R   D T E +VKW  L Y+ CTWE    PA E  S+
Sbjct: 360  NLDRERDIEAIEDFKLVERVIGSRKV-DNTTEYYVKWKRLFYENCTWE----PA-ELVSN 413

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
            +    +        +    + L   +      E +  T  P+ +  G L   Q++ +N++
Sbjct: 414  IAQQEIDRYLDRCSRPPVSNRLESNQATRSAFEPIHGT--PDFICNGKLKDFQVKGVNFM 471

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W + +NV+LADEMGLGKTV   AFI+ L      + P +V+VPLSTMP+W   F  W
Sbjct: 472  AYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHMRNQQGPFIVVVPLSTMPSWAETFDYW 531

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P+LN V Y G   +R II++YE       N+ +     KF+VLLTTYE +L D+S L  
Sbjct: 532  TPDLNYVVYSGNEASRNIIKEYELLVDG--NIKRP----KFHVLLTTYEYVLVDASFLSQ 585

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ L VDE HRLKN  S+L++ L  F    R+L+TGTP+QNN+GE+  L++FL P   
Sbjct: 586  IRWQFLAVDEAHRLKNRDSQLYAKLLEFKSPSRLLITGTPVQNNLGELSALMDFLNPG-- 643

Query: 948  PSLSSFEEKFNDLTT---TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              L   +E   DL++   + K+ EL K + P MLRR K     ++PPK+E+++ VELS +
Sbjct: 644  --LIEIDEDM-DLSSEMASFKLAELTKAIQPFMLRRTKSKVETDLPPKSEKIIRVELSDV 700

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFL 1062
            Q EYY+ +LTKNY  L    KG  +QS+LNI+M+L+K  NHP++    E     GS    
Sbjct: 701  QLEYYKNILTKNYAALNQGSKG-QKQSLLNIMMELKKASNHPFMFANAEERILQGSTRRE 759

Query: 1063 HEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
              +R  I +S K+ LL  +L  L  +GHRVLIFSQM ++LDIL DY+  E     Y+R+D
Sbjct: 760  DALRALITSSGKMMLLDQLLAKLKNDGHRVLIFSQMVRMLDILADYM--EARNFAYQRLD 817

Query: 1121 GSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++ G R+ +I  FN  D + F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QAM
Sbjct: 818  GTIAAGPRRLSIEHFNSPDSTDFAFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAM 877

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
             RAHRIGQ+K + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  ++
Sbjct: 878  ARAHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEATEL 931


>gi|432852988|ref|XP_004067485.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like [Oryzias
            latipes]
          Length = 2979

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 273/705 (38%), Positives = 390/705 (55%), Gaps = 80/705 (11%)

Query: 582  VGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKV--LAK 639
            V K  S  V K+   P V    +        EF VK+   S +H  W  E QL+     +
Sbjct: 744  VDKIMSSRVVKKEVSPGVMVEVE--------EFFVKYKNYSYLHCEWATEQQLEKDKRIQ 795

Query: 640  RKLENYKAKYGTTVINICD--ERWKQPQRV-------ISLRSSKDGTREA---FVKWTGL 687
            +K++ +K K     +   D  E    P  V       +S    KD  +E     VKW  L
Sbjct: 796  QKIKRFKMKQAQRALFFADIEEDPFNPDYVEVDRVLEVSYCEDKDTGQEVVYYLVKWCSL 855

Query: 688  PYDECTWE---KLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVAL 744
            PY++ TWE    +D+  +E++  L         Q +K D+   E P        + +   
Sbjct: 856  PYEDSTWELKDDVDQSKIEEFEQL---------QAVKPDSRRVERP-------PANLWKK 899

Query: 745  TEQPEELKGGALF-PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFK 803
             E   E + G +   +QLE +NWL   W+  +N ILADEMGLGKT+ +  F+  +Y    
Sbjct: 900  REHSREYRNGNMLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIY-RIG 958

Query: 804  AKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKT 863
             K P L++ PLST+ NW  EF  W  +LNV+ YHG   +R +++QYE +  D      + 
Sbjct: 959  IKGPFLIIAPLSTIANWEREFHTWT-HLNVIVYHGSVVSRQMLQQYEMYFRDAQGRAIR- 1016

Query: 864  SSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLL 923
             +Y+F  ++TT+EMIL     L  + W  +++DE HRLKN   KL       + +H+VLL
Sbjct: 1017 GAYRFQAVITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMNLEHKVLL 1076

Query: 924  TGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKK 983
            TGTPLQN + E+++LL+FL+P  FPS ++F ++F DL T ++V++L+ ++ P MLRRLK+
Sbjct: 1077 TGTPLQNTVEELFSLLHFLEPTRFPSENTFMQEFGDLKTEEQVQKLQGILKPMMLRRLKE 1136

Query: 984  DAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIV---MQLR 1040
            D  + + PK E ++ VEL++IQ +YYRA+L KN+  L    KG  Q +M N+V   M+LR
Sbjct: 1137 DVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL---AKGAGQANMPNLVNTMMELR 1193

Query: 1041 KVCNHPYLIPGTEP----------DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRV 1090
            K CNHPYLI G E           +  + ++  +  ++++ KL L+  +L  +   GH+V
Sbjct: 1194 KCCNHPYLIKGAEEKILEDFREVHNPSAPDYHLQAMVQSAGKLVLIDKLLPKMKAGGHKV 1253

Query: 1091 LIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTR 1149
            LIFSQM + LDILEDYL        YER+DG V    RQAAI RF++ D  RFVFLL TR
Sbjct: 1254 LIFSQMVRCLDILEDYLIQRR--YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTR 1311

Query: 1150 SCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQL 1209
            + GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ+K + VYRLV R S E  +   
Sbjct: 1312 AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDR 1371

Query: 1210 AKKKLMLDQ-LFVNKSG---------------SQKEVEDILRWGT 1238
            A  KL LD+ +  + SG               S+KE+ED+LR G 
Sbjct: 1372 ASLKLGLDKAVLQSMSGRDNSLGGGSGGGQQLSKKEIEDLLRRGA 1416


>gi|355750085|gb|EHH54423.1| Chromodomain-helicase-DNA-binding protein 1 [Macaca fascicularis]
 gi|380809118|gb|AFE76434.1| chromodomain-helicase-DNA-binding protein 1 [Macaca mulatta]
 gi|383415415|gb|AFH30921.1| chromodomain-helicase-DNA-binding protein 1 [Macaca mulatta]
 gi|384945016|gb|AFI36113.1| chromodomain-helicase-DNA-binding protein 1 [Macaca mulatta]
          Length = 1712

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 395/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 319  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 378

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 379  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 435

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 436  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 489

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 490  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 549

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW        + +T   KFN+LLTTYE++L D 
Sbjct: 550  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------THHQTKRLKFNILLTTYEILLKDK 602

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 603  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 662

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 663  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 721

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 722  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 780

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 781  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 837

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 838  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 897

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 898  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 957

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 958  SSTPFNKEELSAILKFGAEELF 979


>gi|109658944|gb|AAI17135.1| Chromodomain helicase DNA binding protein 1 [Homo sapiens]
          Length = 1709

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 395/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 317  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 376

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 377  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 433

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 434  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 487

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 488  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 547

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW        + +T   KFN+LLTTYE++L D 
Sbjct: 548  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------THHQTKRLKFNILLTTYEILLKDK 600

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 601  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 660

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 661  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 719

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 720  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 778

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 779  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 835

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 836  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 895

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 896  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 955

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 956  SSTPFNKEELSAILKFGAEELF 977


>gi|426349547|ref|XP_004042358.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Gorilla
            gorilla gorilla]
          Length = 1733

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 395/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 317  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 376

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 377  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 433

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 434  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 487

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 488  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 547

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW        + +T   KFN+LLTTYE++L D 
Sbjct: 548  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------THHQTKRLKFNILLTTYEILLKDK 600

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 601  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 660

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 661  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 719

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 720  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 778

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 779  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 835

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 836  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 895

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 896  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 955

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 956  SSTPFNKEELSAILKFGAEELF 977


>gi|328724512|ref|XP_001948282.2| PREDICTED: hypothetical protein LOC100164870 [Acyrthosiphon pisum]
          Length = 4192

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 265/665 (39%), Positives = 384/665 (57%), Gaps = 57/665 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDERWKQP----- 664
            E+ VK+   S +H  W  E +L    KR   KL+ +K K      NI +   ++P     
Sbjct: 1463 EYYVKYRNFSYLHCEWKTEEELMKGDKRIAAKLKRFKQKMANNT-NIFENLEEEPFNPDY 1521

Query: 665  ---QRVISLR------SSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQF 715
                RV+ +       +++  T+   VKW  L Y++ TWE      LE+      + V F
Sbjct: 1522 IEVDRVLDVSEQLEEPNAEKPTKYYLVKWRSLQYEDSTWE------LEQDVDPAKIEV-F 1574

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSK 775
            ER  ++    +D+  + K     ++ V L + P       L  +QLE LNWL   W+  +
Sbjct: 1575 ER--IRYTPPKDQW-KPKKKPSPNDWVKLDKSPTYKSNNTLREYQLEGLNWLLFSWYNGR 1631

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ +  FI +++ E+  + P LV+ PLST+PNW  EF  W  +LNV+ 
Sbjct: 1632 NCILADEMGLGKTIQSLTFIHAVH-EYGVRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 1689

Query: 836  YHGCAKARAIIRQYE-WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
            YHG + +R +++QYE ++ ++   + K  S  KF+VL+TT+E I++D   LR + W + V
Sbjct: 1690 YHGSSHSRNMVQQYEMYYRNEKGAIIKDIS--KFDVLITTFETIISDCMELRDIGWRLCV 1747

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            +DE HRLKN   KL   L + + +HRVLL+GTPLQNN+ E+++LLNFL+P  F S   F 
Sbjct: 1748 IDEAHRLKNRNCKLLEGLRALNLEHRVLLSGTPLQNNVNELFSLLNFLEPTQFSSCEDFL 1807

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
            ++F  L +  +V++L+ L+ P MLRRLK+D  ++I PK E +V VEL++IQ +YYR +L 
Sbjct: 1808 QEFGALKSETEVQKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 1867

Query: 1015 KNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP---------DSGSVEFLHEM 1065
            KN+  L          +++N +M+LRK C HPYL+ G E          +    +  ++ 
Sbjct: 1868 KNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGAEDQIQYDYRNLNGDDPDVYYKA 1927

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             I +S K+ L+  +L  L   GHRVLIFSQM + LDI+EDYL     P  +ER+DG +  
Sbjct: 1928 LIHSSGKMVLIDKLLPKLKDNGHRVLIFSQMVRCLDIIEDYLVYRKYP--FERLDGRIRG 1985

Query: 1126 GDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQAAI RF   D  RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  R HR
Sbjct: 1986 NLRQAAIDRFCKPDSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHR 2045

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------------NKSGSQKEVED 1232
            IGQ K + VYRL+ R + E  +   A  KL LD+  +            NK  ++KE+ED
Sbjct: 2046 IGQQKMVKVYRLLCRNTYEREMFNKASLKLGLDKAILQSMNTAQGKDLNNKQLTKKEIED 2105

Query: 1233 ILRWG 1237
            +L+ G
Sbjct: 2106 LLKKG 2110


>gi|397494204|ref|XP_003817975.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 1 [Pan paniscus]
          Length = 1798

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 395/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 317  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 376

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 377  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 433

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 434  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 487

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 488  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 547

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW        + +T   KFN+LLTTYE++L D 
Sbjct: 548  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------THHQTKRLKFNILLTTYEILLKDK 600

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 601  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 660

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 661  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 719

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 720  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 778

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 779  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 835

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 836  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 895

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 896  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 955

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 956  SSTPFNKEELSAILKFGAEELF 977


>gi|427794013|gb|JAA62458.1| Putative chromatin remodeling complex swi/snf component swi2, partial
            [Rhipicephalus pulchellus]
          Length = 1946

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 273/688 (39%), Positives = 400/688 (58%), Gaps = 80/688 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S++HN+W     L   KV   +KLENY  +                 Y   
Sbjct: 358  QYLIKWKGWSHLHNTWESMQTLQEQKVKGLKKLENYMKREDELRNWRDNASPEDVEYYEC 417

Query: 653  VINICDE---RWKQPQRVISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYS 706
               + +E   +  + +R+IS   +K G  E      KW GLPY +CTWE  +     K+ 
Sbjct: 418  QQELSEELQFKHMEVERIISHAPAKSGEAEQMDYLCKWDGLPYSDCTWEDGNL-IKRKFQ 476

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGGA---LFPH 759
            H+ D +    RQ  +K  S+         C+    + +   L  QP  + G     L  +
Sbjct: 477  HVIDQY--HARQKSQKIPSKV--------CKVLKVRPKFSPLKTQPSYIGGPQKLELRDY 526

Query: 760  QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPN 819
            QLE LNWL   W K   VILADEMGLGKT+   +F++ L+       P L++VPLST+ +
Sbjct: 527  QLEGLNWLANSWCKENGVILADEMGLGKTIQTISFLTYLFNHHALYGPFLLVVPLSTLAS 586

Query: 820  WLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMIL 879
            W  EFA W+P++NVV Y G   +R++IR++EW    P N        KFN +LTTYE++L
Sbjct: 587  WQKEFAQWSPDMNVVVYLGDVSSRSMIREHEW--CHPGN-----KRLKFNAVLTTYEILL 639

Query: 880  ADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLL 939
             D   L  V W VL VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL
Sbjct: 640  KDKGFLGNVSWAVLGVDEAHRLKNDDSLLYKSLFEFDTNHRLLITGTPLQNSLKELWALL 699

Query: 940  NFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPV 999
            +F+ P  F S   FE +  + +  +   +L K + P +LRR+KKD  +++P K ER++ V
Sbjct: 700  HFIMPQKFDSWEDFEAEHKE-SADKGYTKLHKQLEPFLLRRVKKDVEKSLPAKVERILRV 758

Query: 1000 ELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI-PGTEPDSGS 1058
            E++++Q +YY+ +LTKNY+ L    KG +Q   +NI+M+L+K CNH  LI P   P++  
Sbjct: 759  EMTTVQKQYYKWILTKNYKALSKGLKG-SQSGFINIMMELKKCCNHAMLIRPPDNPNN-- 815

Query: 1059 VEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
            ++ L ++ I+ S KL LL  +L  L + GHRVL+FSQM ++LDI+ DYL +   P  ++R
Sbjct: 816  LDALQQI-IRGSGKLLLLDKLLCRLRETGHRVLVFSQMVRMLDIIADYLQLRRFP--FQR 872

Query: 1119 VDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DGS+    R+ A+  FN D S+ F FLLSTR+ GLGINLATADTV+I+DSD+NP  D+Q
Sbjct: 873  LDGSIKGELRRQALDHFNADASQDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQ 932

Query: 1178 AMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS----------- 1226
            A  RAHRIGQ  ++ +YRLV + SVEE I++ AK+K++LD L + +  +           
Sbjct: 933  AQARAHRIGQKNQVNIYRLVTKNSVEEDIIERAKRKMVLDHLVIQRMDTTGRTVLSKSNA 992

Query: 1227 ---------QKEVEDILRWGTEELFNDS 1245
                     ++E+  IL++G EELF ++
Sbjct: 993  PSSNTTPFNKEELAAILKFGAEELFKET 1020


>gi|350424228|ref|XP_003493728.1| PREDICTED: hypothetical protein LOC100744744 [Bombus impatiens]
          Length = 4166

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 275/699 (39%), Positives = 398/699 (56%), Gaps = 59/699 (8%)

Query: 579  DVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYE-FLVKWVGKSNIHNSWIPESQL--- 634
            DV    K+ G++ +  QE AV   A VK + V  E + VK+   S +H  W  E +L   
Sbjct: 1450 DVKDKSKSEGTITESKQENAV---ADVKPQIVEVEEYFVKYRNFSYLHCEWRTEEELYKG 1506

Query: 635  --KVLAKRKLENYKAKYGTTVINICDERWKQPQ-----RVISLRSSKDGT-----REAFV 682
              ++ AK K    K +  T +    ++    P      RV+   +  D T     +   V
Sbjct: 1507 DKRIQAKLKRFKQKQQQNTNIFENTEDDPFNPDFVEVDRVLDEATHTDPTTGETLKHYLV 1566

Query: 683  KWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIV 742
            KW  L Y++ TWE  ++   EK +     F++F +   K      + P        S  V
Sbjct: 1567 KWRSLQYEDSTWELEEDVDPEKIAQ----FIKFNKVPPKDQWKPKKKPNA------SAWV 1616

Query: 743  ALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEF 802
             L E P      +L P+QLE LNWL   W+   N ILADEMGLGKT+ +  F+ ++Y ++
Sbjct: 1617 KLEESPIYKNNNSLRPYQLEGLNWLLFSWYNGHNCILADEMGLGKTIQSLTFVDAVY-KY 1675

Query: 803  KAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKK 862
              + P L++ PLST+PNW  EF  W  ++NVV YHG A +R ++++YE +  +      K
Sbjct: 1676 GIRGPFLIIAPLSTIPNWQREFESWT-DMNVVVYHGSAASRTMLQEYEVYYKNEKGQQIK 1734

Query: 863  TSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVL 922
                KFNVL+TT+E+I+ D + LRG  W + V+DE HRLKN   KL   L   + +HRVL
Sbjct: 1735 -DLIKFNVLITTFEIIITDFNELRGYNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVL 1793

Query: 923  LTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLK 982
            L+GTPLQNN+ E+++LLNFL+P  F S  +F ++F +L++  +V +L+ L+ P MLRRLK
Sbjct: 1794 LSGTPLQNNVNELFSLLNFLEPVQFSSSEAFLKEFGNLSSESEVHKLQLLLKPMMLRRLK 1853

Query: 983  KDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKV 1042
            +D  +++ PK E +V VEL++IQ +YYR +L +N+  L          +++N +M+LRK 
Sbjct: 1854 EDVEKSLAPKEETVVEVELTNIQKKYYRGILERNFSFLAKGTTSANIPNLMNTMMELRKC 1913

Query: 1043 CNHPYLIPGTEPD------SGSVE----FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            C HP+L+ G E        +G  E    + H + + +S K+ L+  +L  L   GHRVLI
Sbjct: 1914 CIHPFLLNGAEDQIQLDYKTGEKEDSEAYYHAL-VNSSGKMVLIDKLLPKLKASGHRVLI 1972

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSC 1151
            FSQM K LD+LEDYL  +  P  YER+DG +    RQAAI R+++ D  RFVFLL T++ 
Sbjct: 1973 FSQMVKCLDLLEDYLLYKKYP--YERIDGRIRGNLRQAAIDRYSKPDSDRFVFLLCTKAG 2030

Query: 1152 GLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAK 1211
            GLGINL  ADTVIIYDSD+NP  D+QA  R HRIGQ K + VYRL+ R + E  +   A 
Sbjct: 2031 GLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQQKMVKVYRLLCRNTYEREMFDKAS 2090

Query: 1212 KKLMLDQLFV-------------NKSGSQKEVEDILRWG 1237
             KL LD+  +             NK  ++KE+ED+L+ G
Sbjct: 2091 LKLGLDKAILQSMNTSQGGKDPSNKQLTKKEIEDLLKKG 2129


>gi|297675709|ref|XP_002815806.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Pongo abelii]
          Length = 1709

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 395/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 317  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 376

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 377  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 433

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 434  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 487

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 488  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 547

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW        + +T   KFN+LLTTYE++L D 
Sbjct: 548  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------THHQTKRLKFNILLTTYEILLKDK 600

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 601  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 660

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 661  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 719

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 720  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 778

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 779  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 835

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 836  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 895

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 896  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 955

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 956  SSTPFNKEELSAILKFGAEELF 977


>gi|68299795|ref|NP_001261.2| chromodomain-helicase-DNA-binding protein 1 [Homo sapiens]
 gi|269849549|sp|O14646.2|CHD1_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 1;
            Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1
 gi|119616504|gb|EAW96098.1| chromodomain helicase DNA binding protein 1 [Homo sapiens]
          Length = 1710

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 395/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 317  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 376

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 377  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 433

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 434  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 487

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 488  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 547

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW        + +T   KFN+LLTTYE++L D 
Sbjct: 548  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------THHQTKRLKFNILLTTYEILLKDK 600

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 601  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 660

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 661  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 719

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 720  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 778

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 779  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 835

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 836  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 895

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 896  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 955

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 956  SSTPFNKEELSAILKFGAEELF 977


>gi|357121631|ref|XP_003562521.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
            [Brachypodium distachyon]
          Length = 1734

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 277/695 (39%), Positives = 406/695 (58%), Gaps = 91/695 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENY------KAKYGTTV----INICD--- 658
            EF +KW G+S +H  W   S+L+ V   +K+ NY      + +Y  ++    + + D   
Sbjct: 438  EFYIKWKGQSYLHCQWKTLSELRSVSGFKKVLNYMKRVTEEQRYKRSLSREEVEVHDVGK 497

Query: 659  -------ERWKQPQRVISLRSSK---DG-TREAFVKWTGLPYDECTWEK-----LDEPAL 702
                   +++ Q +RV + R+SK   DG   E  VKW GLPY E TWEK       + A+
Sbjct: 498  EMELDLIKQYSQVERVFADRASKVDGDGLVPEYLVKWQGLPYAESTWEKDTDIEFAQEAI 557

Query: 703  EKY------SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGAL 756
            ++Y      + +    V F+R+  K                 + +  L +QPE LKGG L
Sbjct: 558  DEYKAREVATAVLGKTVDFQRKKSK-----------------ASLRRLDDQPEWLKGGKL 600

Query: 757  FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLST 816
              +QLE LN+L   W    NVILADEMGLGKT+ + + +  L+   +   P LV+VPLST
Sbjct: 601  RDYQLEGLNFLVNGWRNDTNVILADEMGLGKTIQSVSMLGFLHNAQEINGPFLVVVPLST 660

Query: 817  MPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSY-KFNVLLTTY 875
            + NW  EF  W P++NVV Y G   +R + +Q+E+        NKK   + KF+ L+TTY
Sbjct: 661  LSNWAKEFRKWLPDMNVVVYVGNRASREMCQQHEFFT------NKKGGRHVKFHTLITTY 714

Query: 876  EMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEM 935
            E+IL D + L  + W  L+VDE HRLKNS + L+  L  FS ++++L+TGTPLQN++ E+
Sbjct: 715  EVILKDKAVLSKIKWNYLMVDEAHRLKNSEASLYIALLEFSTKNKLLITGTPLQNSVEEL 774

Query: 936  YNLLNFLQPASFPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKT 993
            + LL+FL P  F S  +F E++ +L++  + E   L K + PH+LRR+ KD  +++PPK 
Sbjct: 775  WALLHFLDPVKFNSKDTFVERYKNLSSFNETELANLHKELRPHILRRVIKDVEKSLPPKI 834

Query: 994  ERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHPYLIPG 1051
            ER++ +E+S +Q +YY+ +L +N+Q   N+ KGV   Q S+LN+V++L+K CNHP+L   
Sbjct: 835  ERILRIEMSPLQKQYYKWILERNFQ---NLNKGVRGNQVSLLNVVVELKKCCNHPFLFES 891

Query: 1052 TEPDSGSVEFLHEMRIK----ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
             +   G        +++    +S KL LL  +L  L +  HRVLIFSQM ++LDIL +YL
Sbjct: 892  ADHGYGGDSIGDRNKVERIVMSSGKLVLLDKLLVRLRETNHRVLIFSQMVRMLDILSEYL 951

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
            ++      ++R+DGS     R  A+  FN   S  F FLLSTR+ GLGINLATADTVII+
Sbjct: 952  SLR--GFQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIF 1009

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS 1226
            DSD+NP  D+QAM+RAHRIGQ + + +YR V   SVEE IL+ AKKK++LD L + K  +
Sbjct: 1010 DSDWNPQNDLQAMSRAHRIGQQETVNIYRFVTCKSVEEDILERAKKKMVLDHLVIQKLNA 1069

Query: 1227 QKEVED-----------------ILRWGTEELFND 1244
            +  +E                  ILR+G EELF +
Sbjct: 1070 EGRLEKKETKKGASMFDKNELSAILRFGAEELFKE 1104


>gi|326668862|ref|XP_699360.4| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Danio rerio]
          Length = 2902

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 267/663 (40%), Positives = 377/663 (56%), Gaps = 60/663 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 334  FYVKYRNFSYLHCKWATLEELEKDPRIHQKIKRFRNKQAQMKHIFTEPDEDLFNPDYIEV 393

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             RV+ +  + D           VKW  L Y+E TWE  ++    K     +L     ++ 
Sbjct: 394  DRVLEIAITTDTETGEEVTHYLVKWCSLSYEESTWELQEDVDPVKIKEFEEL-----KKV 448

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
             +    E  LP      ++S         +   G  L  +QLE +NWL   W+  KN IL
Sbjct: 449  PEMKHVERPLPEQWQKLEKSR--------DYRNGNQLREYQLEGMNWLLFNWYNRKNCIL 500

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+  ++     + P L++ PLST+ NW  EF  W   +NV+ YHG 
Sbjct: 501  ADEMGLGKTIQSITFLYEIFL-MGLRGPFLIIAPLSTITNWEREFRTWT-EMNVIVYHGS 558

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I QYE +  D +  N  +  +KF  ++TT+EMI+AD   L+ + W  +V+DE H
Sbjct: 559  QISRQMILQYEMYHRD-EQGNIMSGEFKFQGVITTFEMIMADCPELKKINWRCVVIDEAH 617

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P+ FPS ++F E+F D
Sbjct: 618  RLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETTFLEEFGD 677

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 678  LKTEEQVKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAF 737

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMR 1066
            L    KG  Q +M N++   M+LRK CNHPYLI G E            S + +F  +  
Sbjct: 738  L---AKGANQHNMPNLINTMMELRKCCNHPYLITGAEEKILESFRKTYSSDAADFQLQAM 794

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVG 1126
            I+A+ KL L+  +L  L   GH+VL+FSQM + LDILEDYL       TYER+DG V   
Sbjct: 795  IQAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDYLIQRR--YTYERIDGRVRGN 852

Query: 1127 DRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRI 1185
             RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRI
Sbjct: 853  LRQAAIDRFSKVDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 912

Query: 1186 GQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSG--------SQKEVEDIL 1234
            GQSK + VYRL+ R S E  +   A  KL LD+     +N+ G        S+ EVED+L
Sbjct: 913  GQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSKMEVEDLL 972

Query: 1235 RWG 1237
            R G
Sbjct: 973  RKG 975


>gi|409080334|gb|EKM80694.1| hypothetical protein AGABI1DRAFT_37749 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 1346

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/572 (43%), Positives = 347/572 (60%), Gaps = 28/572 (4%)

Query: 659  ERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
            E ++  +R++S R   DG  E F KW GL Y+ CTWE          S       Q + +
Sbjct: 202  ENFRNVERIVSHREGADGEMEYFCKWQGLNYEHCTWE---------LSKDVKPIAQEQIE 252

Query: 719  TLKKDASEDELPRGKGDCQQSE---IVALTEQPEELK--GGALFPHQLEALNWLRKCWHK 773
              ++  +E + P       ++       + + P+ ++  GG L   QL  LNWL   W  
Sbjct: 253  AYRQREAEGKFPYKSASYLRTSRPPFTRILQDPDYIQATGGELKDFQLTGLNWLAYVWSN 312

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
              N ILADEMGLGKTV   AFIS L+ E +   P LV+VPLST+  W  +F LWAP++NV
Sbjct: 313  GDNGILADEMGLGKTVQTVAFISWLFHEMQQYGPFLVIVPLSTITAWQMQFNLWAPDINV 372

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
            + Y G A AR +IR +E+  S     NKK    K NVLLTTYE+ L D+  L  + W++L
Sbjct: 373  ITYIGTAPAREVIRTHEFGPS-----NKK---LKMNVLLTTYELTLRDAKELVDIKWQLL 424

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNI-GEMYNLLNFLQPASFPSLSS 952
             VDE HRLKNS S+L+  L  FS   ++L+TGTPLQNN+  E+ +L++FL P  F   + 
Sbjct: 425  AVDEAHRLKNSESQLYEALRCFSAASKLLITGTPLQNNVRAELLSLMHFLMPDKFALTNE 484

Query: 953  FEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAM 1012
            F+   ND    +K++EL   +   MLRRLK+D + ++P K+ER++ VE+S++Q  +Y+ +
Sbjct: 485  FD--LNDADHEEKIKELHLQLESLMLRRLKRDVLTSLPTKSERILRVEMSALQTHFYKNI 542

Query: 1013 LTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAK 1072
            LTKN+  L     G    S+LNI M+L+K  NHPYL  G E  S S E   +  +  S K
Sbjct: 543  LTKNFAGLVKSANGNNNISLLNIAMELKKAANHPYLFDGAETRSDSNEETLKGLVMNSGK 602

Query: 1073 LTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAI 1132
            + LL  +L  L ++GHRVLIFSQM ++LDIL DY+++      ++R+DG V+   R+ +I
Sbjct: 603  MVLLDKLLARLRQDGHRVLIFSQMVRMLDILSDYMSLR--GYIHQRLDGMVASEQRKKSI 660

Query: 1133 TRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRL 1191
              FN   S  F FLLSTR+ GLGINL TA+TVII+DSD+NP  D+QAM RAHRIGQ   +
Sbjct: 661  AHFNAPGSPDFAFLLSTRAGGLGINLETANTVIIFDSDWNPQNDLQAMARAHRIGQKSHV 720

Query: 1192 LVYRLVVRASVEERILQLAKKKLMLDQLFVNK 1223
             VYR V + ++EE +L+ AKKK++L+   +N+
Sbjct: 721  SVYRFVSKDTMEEDVLERAKKKMVLEYAIINQ 752


>gi|195031145|ref|XP_001988297.1| GH10643 [Drosophila grimshawi]
 gi|193904297|gb|EDW03164.1| GH10643 [Drosophila grimshawi]
          Length = 1931

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/692 (40%), Positives = 393/692 (56%), Gaps = 81/692 (11%)

Query: 609  AVSYEFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAKYGTTVINICDERWKQPQ 665
            A   +FL+KW G S IHN+W  E+ L   K    +KL+N+  K   T    C  R+  P+
Sbjct: 389  ASEVQFLIKWKGWSYIHNTWESETTLRDMKAKGMKKLDNFIKKEQDTA---CWRRYAGPE 445

Query: 666  RV----------------------ISLRSSK--DGTREAFVKWTGLPYDECTWEKLDEPA 701
             +                      I  R +K  DG+ E F KW  LPY E TWE      
Sbjct: 446  DIDYFECQLELQHDLLKSYNNVDRIIARGTKPDDGSEEFFCKWQSLPYAESTWEDA-ALV 504

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG-AL 756
            L K+    + F   ER+  K   S          C+    + +   +  QPE L  G  L
Sbjct: 505  LRKWQRCVEQFT--ERENSKWTPSRH--------CRVIKYRPKFSRIKLQPEFLAEGLTL 554

Query: 757  FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLST 816
              +Q++ LNWL   W K  +VILADEMGLGKT+    F+ SL+       P L +VPLST
Sbjct: 555  RDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLST 614

Query: 817  MPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYE 876
            M  W  EF LWAP++NVV Y G  K+R +I QYEW       L       KFN +LTTYE
Sbjct: 615  MTAWQREFDLWAPDMNVVTYLGDVKSRELIHQYEWQFEGSKRL-------KFNCILTTYE 667

Query: 877  MILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMY 936
            ++L D  +L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++
Sbjct: 668  IVLKDKQYLGALQWAALLVDEAHRLKNDDSLLYKSLKEFETNHRLLITGTPLQNSLKELW 727

Query: 937  NLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERM 996
             LL+F+ PA F +  +FE +  +    +    L + + P++LRR+KKD  +++P K E++
Sbjct: 728  ALLHFIMPAKFDTWENFELQHGN-AEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQI 786

Query: 997  VPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS 1056
            + VE++S+Q +YY+ +LTKN+  LR  GK  +  + LNIV++L+K CNH  LI  +E + 
Sbjct: 787  LRVEMTSLQKQYYKWILTKNFDALRK-GKRGSTSTFLNIVIELKKCCNHAALIRPSEFEL 845

Query: 1057 GSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPK 1114
              ++    ++  +K S KL LL  +L  L   GHRVLIFSQM ++LD+L DYL       
Sbjct: 846  FGLQQDEALQTLLKGSGKLVLLDKLLCKLKDTGHRVLIFSQMVRMLDVLADYLQKRHF-- 903

Query: 1115 TYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPH 1173
            +++R+DGS+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP 
Sbjct: 904  SFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQ 963

Query: 1174 ADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----------N 1222
             D+QA  RAHRIGQ  ++ +YRLV   SVEE+I++ AK+K++LD L +           +
Sbjct: 964  NDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLD 1023

Query: 1223 KSG----------SQKEVEDILRWGTEELFND 1244
            KSG          ++ ++  IL++G EELF D
Sbjct: 1024 KSGNGHSSNSNPFNKDDLSAILKFGAEELFKD 1055


>gi|443696075|gb|ELT96855.1| hypothetical protein CAPTEDRAFT_224509 [Capitella teleta]
          Length = 2952

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/663 (38%), Positives = 378/663 (57%), Gaps = 56/663 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVI-----NICDERWKQPQ 665
            F VK+   S +H  W    +L+   +R   K++ +K K   + +      + +  + +  
Sbjct: 872  FYVKYKNFSYLHCEWRTADELERGDRRIQGKIKRFKLKKEQSFVLQDEDELFNPAYVEVD 931

Query: 666  RVISLRSSKDG-----TREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFER 717
            R++    +KD      T+   VKW GL Y++ TWE    +D   +  Y   +    +  R
Sbjct: 932  RILDSSRTKDPVTSEETQHYLVKWRGLSYEDSTWEVAADVDRAKIVAYEKFSTPPDEEHR 991

Query: 718  QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNV 777
            + + + ++             S    + E P    G  L  +QLE ++WL   W+  +N 
Sbjct: 992  EAVARPSA-------------SRWKKMEESPHYKNGNQLREYQLEGVSWLSFNWYNKQNC 1038

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+ S+Y ++  K P L++ PLST+ NW  EF +W  ++N + YH
Sbjct: 1039 ILADEMGLGKTIQSITFLHSMY-DYGIKGPYLIIAPLSTIGNWSREFEVWT-DMNAIVYH 1096

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I++YE +  D +   +    YKFN L+TTYE+I++D   L  + W  +V+DE
Sbjct: 1097 GTTASRNMIQEYEMYHKDSEG-KRIPDCYKFNALITTYEVIISDVEELSEIEWRAVVIDE 1155

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L  F  + RVLLTGTPLQNN  E+++LLNFL+P  F S  ++ ++F
Sbjct: 1156 AHRLKNRNCKLLEGLRCFDLEFRVLLTGTPLQNNTDELFSLLNFLEPKQFSSSEAWSQEF 1215

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
              LT+  +V++LK L+ P MLRRLK+D  +N+  K E ++ VEL++IQ +YYRA+L +N+
Sbjct: 1216 GSLTSDTQVDKLKALLKPMMLRRLKQDVEKNLAAKEETIIEVELTNIQKKYYRAILERNF 1275

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS------GSVEFLHEMR----I 1067
              L   G      +++N +M+LRK CNHPYL+ G E         G  E  HE +    +
Sbjct: 1276 SFLSKGGTSSNIPNLMNTMMELRKCCNHPYLVTGAEEQILEEARLGGHELTHERQFLAMV 1335

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            ++S KL L+  +L  L    H+VLIFSQMT++LDI+EDY+  +     YER+DG +    
Sbjct: 1336 QSSGKLVLVDKLLPKLKAGNHKVLIFSQMTRVLDIIEDYIIQK--KYLYERIDGHIRGDL 1393

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQ AI RF++ D  RFVFLL TR+ GLGINL  ADTVIIYDSD+NP  D+QA  R HRIG
Sbjct: 1394 RQEAIDRFSKTDSDRFVFLLCTRAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIG 1453

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG-----------SQKEVEDILR 1235
            Q K + VYRL+ R + E  +   A KKL LD+  +   G           S+ E+E++L+
Sbjct: 1454 QVKAVKVYRLITRNTYEREMFDKASKKLGLDKAVLQSMGPADLNAANGQLSKNEIENLLK 1513

Query: 1236 WGT 1238
             G 
Sbjct: 1514 KGA 1516


>gi|114600959|ref|XP_517850.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Pan
            troglodytes]
 gi|410223612|gb|JAA09025.1| chromodomain helicase DNA binding protein 1 [Pan troglodytes]
 gi|410267810|gb|JAA21871.1| chromodomain helicase DNA binding protein 1 [Pan troglodytes]
 gi|410295342|gb|JAA26271.1| chromodomain helicase DNA binding protein 1 [Pan troglodytes]
 gi|410355249|gb|JAA44228.1| chromodomain helicase DNA binding protein 1 [Pan troglodytes]
          Length = 1710

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 395/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 317  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 376

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 377  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 433

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 434  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 487

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 488  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 547

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW        + +T   KFN+LLTTYE++L D 
Sbjct: 548  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------THHQTKRLKFNILLTTYEILLKDK 600

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 601  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 660

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 661  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 719

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 720  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 778

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 779  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 835

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 836  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 895

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 896  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 955

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 956  SSTPFNKEELSAILKFGAEELF 977


>gi|425774446|gb|EKV12753.1| hypothetical protein PDIG_41890 [Penicillium digitatum PHI26]
 gi|425783636|gb|EKV21476.1| hypothetical protein PDIP_06170 [Penicillium digitatum Pd1]
          Length = 1494

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 254/651 (39%), Positives = 373/651 (57%), Gaps = 47/651 (7%)

Query: 612  YEFLVKWVGKSNIHNSWIP-ESQLKVLAKRKLENY---------KAKYGTTVINICDERW 661
            +EF +KW  KS+ H +W   ES     + R+++NY         + +Y         E+W
Sbjct: 271  FEFCIKWQDKSHYHATWESNESISNFRSTRRVDNYVRKVLNEDIRLQYSVDAPPEDREKW 330

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                          K+ +RVI +R   DGT E  VKW  L YD CTWE  D  + E    
Sbjct: 331  NLDRERDVEAIEDYKKVERVIGVRDGDDGTMEYLVKWKRLFYDSCTWEPEDLVS-EIAQR 389

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    +    D +E  +        +     +   P  L+ G L   Q++ LN+L
Sbjct: 390  EVDRFLDRTARQPVSDKNEINV------ATRKSFEPIHGTPSFLQNGELKDFQVKGLNFL 443

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W + +NV+LADEMGLGKTV   +FI+ +    + + P +V+VPLSTMP W   F  W
Sbjct: 444  AFNWVRGRNVVLADEMGLGKTVQTVSFINWMRHVRRQQGPFIVIVPLSTMPAWADTFDHW 503

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P+LN V Y+G  KAR+++R YE        ++      KF+VLLTTYE  + DS  L  
Sbjct: 504  TPDLNYVVYNGSEKARSVLRDYELM------VDGNPKRPKFHVLLTTYEYAMNDSPFLGQ 557

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
              W+ + VDE HRLKN  S+L+  L  +  Q R+L+TGTP+QNN+ E+  L++FL P   
Sbjct: 558  FKWQFMAVDEAHRLKNRDSQLYIKLFEWKCQARLLITGTPIQNNLAELSALMDFLNPGLI 617

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
               +  +   N    +QK+ EL   + P+MLRR K     ++PPKTE+++ VELS +Q E
Sbjct: 618  DVDADMD--LNSEAASQKLAELTNAIQPYMLRRTKSKVESDLPPKTEKIIRVELSDVQLE 675

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD----SGSVEFLH 1063
            YY+ +LTKNY  L +  KG+ +QS+LNI+M+L+K  NHP++ P  E      S   E + 
Sbjct: 676  YYKNILTKNYAALNDGNKGM-KQSLLNIMMELKKASNHPFMFPNAEAKILEGSSRREDIL 734

Query: 1064 EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
               I +S K+ LL  +L+ L  +GHRVLIF QM  +L+IL +Y+  E+    Y+R+DG++
Sbjct: 735  RAMITSSGKMMLLDQLLRKLSVDGHRVLIFCQMVGMLNILSEYM--EYRGYKYQRLDGTI 792

Query: 1124 SVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
                R+ AI  +N   S  F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QAM RA
Sbjct: 793  PSAARRLAIEHYNAPGSTDFAFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARA 852

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            HRIGQ++ + VYRLV + ++EE +++ A+ KL+L+ + + +  + KE  ++
Sbjct: 853  HRIGQTRPVSVYRLVSKDTIEEEVIERARNKLLLEFITIQRGVTDKEASEM 903


>gi|255940126|ref|XP_002560832.1| Pc16g04810 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585455|emb|CAP93151.1| Pc16g04810 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1488

 Score =  451 bits (1161), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/651 (38%), Positives = 373/651 (57%), Gaps = 47/651 (7%)

Query: 612  YEFLVKWVGKSNIHNSWIP-ESQLKVLAKRKLENY---------KAKYGTTVINICDERW 661
            +EF +KW  KS+ H +W   ES     + R+++NY         + +Y         E+W
Sbjct: 271  FEFCIKWQDKSHYHATWESNESIANFRSTRRVDNYVRKVLNEDIRLQYSVDAPPEDREKW 330

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                          K+ +RVI +R  +DGT E  VKW  L YD CTWE  D  +      
Sbjct: 331  NLDRERDVEAIEDYKKVERVIGVRDGEDGTTEYLVKWKRLFYDSCTWEPEDLVSEIAQRE 390

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
            +     +  RQ +  D +E  +        +     +   P  L+ G L   Q++ LN+L
Sbjct: 391  IDRFLDRTARQPIS-DKNEMNV------ATRKSFEPIHGTPSFLQNGELKDFQVKGLNFL 443

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W + +NV+LADEMGLGKTV   +FI+ +    + + P +V+VPLSTMP W   F  W
Sbjct: 444  AFNWVRGRNVVLADEMGLGKTVQTVSFINWMRHVRRQQGPFIVIVPLSTMPAWADTFDHW 503

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P+LN V Y+G  KAR+++R YE        ++      KF+VLLTTYE  + DS  L  
Sbjct: 504  TPDLNYVVYNGSEKARSVLRDYELM------VDGNPKRPKFHVLLTTYEYAMNDSPFLGQ 557

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
              W+ + VDE HRLKN  S+L+  L  +  Q R+L+TGTP+QNN+ E+  L++FL P   
Sbjct: 558  FKWQFMAVDEAHRLKNRDSQLYIKLFEWKCQARLLITGTPIQNNLAELSALMDFLNPGLV 617

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
                  +   N    +QK+ EL   + P+MLRR K     ++PPKTE+++ VELS +Q E
Sbjct: 618  EV--DVDMDLNSEVASQKLAELTTAIQPYMLRRTKSKVESDLPPKTEKIIRVELSDVQLE 675

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD----SGSVEFLH 1063
            YY+ +LTKNY  L +  KG+ +QS+LNI+M+L+K  NHP++ P  E      S   E + 
Sbjct: 676  YYKNILTKNYAALNDGNKGM-KQSLLNIMMELKKASNHPFMFPNAEAKILEGSARREDIL 734

Query: 1064 EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
               I +S K+ LL  +L+ L  +GHRVLIF QM  +L+IL +Y+  E+    Y+R+DG++
Sbjct: 735  RAMITSSGKMMLLDQLLRKLSVDGHRVLIFCQMVGMLNILSEYM--EYRGYKYQRLDGTI 792

Query: 1124 SVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
                R+ AI  +N   S  F FLLSTR+ GLGINL TADTV+++DSD+NP AD+QAM RA
Sbjct: 793  PSAARRLAIEHYNAPGSTDFAFLLSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARA 852

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            HRIGQ++ + VYRLV + ++EE +++ A+ KL+L+ + + +  + KE  ++
Sbjct: 853  HRIGQTRPVSVYRLVSKDTIEEEVIERARNKLLLEFITIQRGVTDKEASEM 903


>gi|67478494|ref|XP_654639.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica
            HM-1:IMSS]
 gi|56471706|gb|EAL49253.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
            histolytica HM-1:IMSS]
 gi|449708079|gb|EMD47606.1| chromodomain helicase DNA binding protein, putative [Entamoeba
            histolytica KU27]
          Length = 1262

 Score =  451 bits (1161), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 269/677 (39%), Positives = 390/677 (57%), Gaps = 78/677 (11%)

Query: 613  EFLVKWVGKSNIHNSWIP-ESQLKVLAKRKLENY-------------KAKYGTTVINI-- 656
            EF +KW+  S  HN+WI  E  +++    K++N+               K     IN+  
Sbjct: 216  EFEIKWMNFSYRHNTWINFEESIEMKGLLKVKNFIKNIKKQAELYIGAPKEDIEAINVEM 275

Query: 657  -----CDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKL-------DEPALEK 704
                   E +K  +R+I  +   D     FVKW GL Y EC+WEK        D   +EK
Sbjct: 276  ESQKEVIEGYKNVERIIDEQEGPDKQLMYFVKWVGLQYGECSWEKESDLREENDLKEIEK 335

Query: 705  YSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEAL 764
            Y      + + +R T         LPR        + +   E PE      L  +Q+E +
Sbjct: 336  YHKRIKEWEEKKRCT--------PLPR--------KFIKFVEGPE--VKNKLRDYQIEGV 377

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NW+   + ++ NVILADEMGLGKTV    FI  LY  +    P LV+VPLST+ NW  EF
Sbjct: 378  NWITYAFSQNTNVILADEMGLGKTVQTITFIRHLYDNYNIIGPFLVIVPLSTISNWSKEF 437

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WAP LN V Y G  ++RAIIR+ E   +       K  + KFNVLLT++E+++ D   
Sbjct: 438  NKWAPKLNCVVYTGDGESRAIIRKTEMFGN-------KKGTIKFNVLLTSFELVIKDQDV 490

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
                 W+  VVDE HRLKN+  +L+ +L   + ++++L+TGTPLQN + E+++LL+FL P
Sbjct: 491  FNQFHWKYTVVDEAHRLKNNEGQLYEVLMRTTTENKLLITGTPLQNTLKELWSLLHFLHP 550

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F S   FE+ ++ +  T+++ ++   + P++LRR+KKD  +++PPK ER++ VELS I
Sbjct: 551  KKFISFEEFEKTYS-VEGTEEINKIHNELKPYLLRRMKKDVEKSLPPKKERILRVELSPI 609

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQ--SMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL 1062
            Q +YYR ++TKN   L+   K V QQ  S++NI M+L+K+CNHP LI             
Sbjct: 610  QKQYYRWIITKNSDALK---KAVQQQKTSLMNICMELKKLCNHPILINELMNSENE---- 662

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
             E  I++  K+ LL  +L  L + GHRVLIFSQM ++LD+L +YL+  F    Y+R+DG+
Sbjct: 663  -ENLIQSCGKMILLDKLLVKLKETGHRVLIFSQMVRMLDVLSNYLH--FRGFNYQRLDGA 719

Query: 1123 VSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    RQ A+  FN +D + FVFLLSTR+ GLGINL TADTVIIYDSD+NP  D+QA  R
Sbjct: 720  MGREARQRAMDHFNAKDSTDFVFLLSTRAGGLGINLTTADTVIIYDSDWNPQNDLQAQAR 779

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN-------KSGSQ----KEV 1230
             HRIGQ K + +YRL    ++EE+IL  AKKKL+LD L +        K+G++     E+
Sbjct: 780  CHRIGQEKTVNIYRLATEGTIEEKILLSAKKKLVLDHLIIQTMEKKGKKNGNELFDKSEL 839

Query: 1231 EDILRWGTEELFNDSPG 1247
            + IL++G +++FN   G
Sbjct: 840  QKILQFGAQDIFNKDNG 856


>gi|410919259|ref|XP_003973102.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 6-like [Takifugu rubripes]
          Length = 3841

 Score =  451 bits (1160), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 282/699 (40%), Positives = 391/699 (55%), Gaps = 65/699 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK-----RKLENYKAKYGTT--VINICDERWKQPQ 665
            EF VK+   S +H  W   + LK L K     +K++ ++ K      +    DE    P 
Sbjct: 816  EFYVKYRNFSYLHCKW---ATLKELEKDPRIHQKIKRFRTKQAQMKHLFTEPDEDLFNPD 872

Query: 666  -----RVISLRSSKDG-TRE----AFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQF 715
                 RV+ +  + D  TRE      VKW  L Y+E TWE  ++   EK     ++    
Sbjct: 873  YVEVDRVLDVAVTTDTETREEVTHYLVKWCSLSYEEATWELQEDLDPEKIREFEEV---- 928

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKS 774
              Q L  D    + P        SE     E+  + + G  L  +QLE +NWL   W+  
Sbjct: 929  --QKLPADLRHVDRP-------PSEKWQKLERSRDYRNGNELREYQLEGMNWLLFNWYNR 979

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
            KN ILADEMGLGKT+ +  F+  ++     + P L++ PLST+ NW  EF  W  ++NV+
Sbjct: 980  KNCILADEMGLGKTIQSITFLFEIF-NMSIRGPFLIIAPLSTITNWEREFRTWT-HMNVI 1037

Query: 835  EYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
             YHG   +R +I QYE    D    N   S  KF+ L+TT+EMI+AD   LR + W  +V
Sbjct: 1038 VYHGSQISRQMILQYEMFYRDAQG-NTIPSVLKFHGLITTFEMIMADCPELRKLHWRCVV 1096

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            +DE HRLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P  F S ++F 
Sbjct: 1097 IDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPLQFQSETTFL 1156

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
            E+F DL T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L 
Sbjct: 1157 EEFGDLKTDEQVKKLQAILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILE 1216

Query: 1015 KNYQILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSV 1059
            K +  L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  +V
Sbjct: 1217 KXFSFL---SKGANQHNMPNLINTMMELRKCCNHPYLITGAEEKILESFRKSYSPD--AV 1271

Query: 1060 EFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
            +F  +  I+A+ KL L+  +L  L   GH+VL+FSQM + LDILEDYL       +YER+
Sbjct: 1272 DFQLQAMIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDYLIQRR--YSYERI 1329

Query: 1120 DGSVSVGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DG V    RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA
Sbjct: 1330 DGRVRGNQRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQA 1389

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILR 1235
              R HRIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +
Sbjct: 1390 QARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSK 1449

Query: 1236 WGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
               E+L     G  G  M E +   +    D++Q  ++R
Sbjct: 1450 LEVEDLLKK--GAYGALMDEEDEGSKFCEEDIDQILQRR 1486


>gi|94707512|sp|Q8BYH8.2|CHD9_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 9;
            Short=CHD-9; AltName: Full=ATP-dependent helicase CHD9;
            AltName: Full=PPAR-alpha-interacting complex protein 320
            kDa; AltName: Full=Peroxisomal proliferator-activated
            receptor A-interacting complex 320 kDa protein
          Length = 2885

 Score =  451 bits (1160), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 271/667 (40%), Positives = 375/667 (56%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +       + D  E    P  V 
Sbjct: 714  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVE 773

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 774  VDRILEVSFCEDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 827

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    EQ  E K G  L  +QLE LNWL   W+  +N 
Sbjct: 828  ASRPDTRHLDRP-------PSNIWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNC 880

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 881  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 938

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 939  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIDWRCVIIDE 997

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 998  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1057

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1058 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1117

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1118 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDFHLQ 1174

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1175 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1232

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1233 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1292

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N SG    S+KE+E
Sbjct: 1293 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIE 1352

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1353 DLLRRGA 1359


>gi|396462858|ref|XP_003836040.1| similar to chromodomain helicase (Chd1) [Leptosphaeria maculans JN3]
 gi|312212592|emb|CBX92675.1| similar to chromodomain helicase (Chd1) [Leptosphaeria maculans JN3]
          Length = 1610

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 273/661 (41%), Positives = 378/661 (57%), Gaps = 63/661 (9%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLKVLAK---RKLENY------------------KAKYG 650
            +E+L+KW  +++ H++W  E+     A    RKL+NY                    ++ 
Sbjct: 312  FEYLIKWQDRAHYHSTW--ENYKTASAHKGWRKLDNYFKGPVRSDMYYHARKKQEPEEFE 369

Query: 651  TTVINICDERWKQ-----PQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA--LE 703
              ++    ER  Q      +RVI  R   D T E FVKW GL Y+ CTWE    PA  + 
Sbjct: 370  QHMVAREAERESQLDFHVVERVIDSRDGDDET-EYFVKWKGLTYEFCTWE----PASLIS 424

Query: 704  KYSHL-TDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLE 762
            + S    D ++         D  E  L        + + V L  QP+ +K G L   QL+
Sbjct: 425  RLSQTEIDRYLDRSSNRPTSDTRESNL------NTRRKFVKLDAQPDYIKYGQLRGFQLQ 478

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LN+L   W +  NVILADEMGLGKTV   +FI+ L  + +   P + +VPLSTMP W  
Sbjct: 479  GLNFLAHNWCRGTNVILADEMGLGKTVQTVSFINWLRHDRRQDGPFICVVPLSTMPAWAD 538

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
             F  W P++N V Y G   AR+IIR  E      D   +KT   KFNVLLTTYE +LAD 
Sbjct: 539  TFNNWTPDVNYVIYTGREDARSIIRDKELLI---DGNPRKT---KFNVLLTTYEYVLADW 592

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
              L  + W+ L VDE HRLKN  S+L+  L  F+   R+L+TGTP+QN +GE+  L++FL
Sbjct: 593  QFLSSIKWQFLAVDEAHRLKNRESQLYDRLRQFNAPSRLLITGTPIQNTLGELAALMDFL 652

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P       + +   +D   + K+ EL + + P+M+RR K+    ++PPK+E+++ VELS
Sbjct: 653  MPGKITVDENVDLASDD--ASHKLAELSEAIQPYMIRRTKEKVENDLPPKSEKILRVELS 710

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP-----DSG 1057
             IQ EYY+ +LT+NY+ L   G G  +QS+LNIVM+L+K  NH  L P  E      D+ 
Sbjct: 711  DIQLEYYKNILTRNYEALNEGGAG-HKQSLLNIVMELKKASNHALLFPNAEAKFIRGDAT 769

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
              E L  + I  S K+ LL  +L  L  +GHRVLIFSQM  +LDIL DYL +   P  ++
Sbjct: 770  KDETLKAL-ITTSGKMMLLDRLLGKLKADGHRVLIFSQMVHMLDILTDYLKLRNYP--FQ 826

Query: 1118 RVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG+V   +R+ AI  FN   S  + FLLSTR+ GLGINL TADTVII+DSD+NP AD+
Sbjct: 827  RLDGTVPAAERKIAIDHFNAPGSDDYCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADL 886

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS---QKEVEDI 1233
            QAM RAHRIGQ K + VYRLV + ++EE IL+ A+ K ML+ + + +  +   QKE+ D 
Sbjct: 887  QAMARAHRIGQQKPVSVYRLVSKDTIEEEILERARNKRMLEFITIQRGVTDRQQKELNDK 946

Query: 1234 L 1234
            +
Sbjct: 947  M 947


>gi|403292582|ref|XP_003937317.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Saimiri
            boliviensis boliviensis]
          Length = 2898

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 269/666 (40%), Positives = 374/666 (56%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D         + DC  S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTR-------RLDCPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1354 DLLRRG 1359


>gi|222637616|gb|EEE67748.1| hypothetical protein OsJ_25446 [Oryza sativa Japonica Group]
          Length = 1734

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 280/695 (40%), Positives = 404/695 (58%), Gaps = 91/695 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENY------KAKYGTTV----INICD--- 658
            EF +KW G+S +H  W   S+L+ V   +K+ NY      + +Y  ++    + + D   
Sbjct: 435  EFYIKWKGQSFLHCQWKTLSELQNVSGFKKVLNYMKRVTDELRYKRSLSREEVEVHDVGK 494

Query: 659  -------ERWKQPQRVISLRSSK----DGTREAFVKWTGLPYDECTWEK----------L 697
                   +++ Q +R+ + R SK    D   E  VKW GLPY E TWEK          +
Sbjct: 495  EMELDLIKQYSQVERIFADRVSKVDGDDLVPEYLVKWQGLPYAESTWEKDTDIEFAQDAI 554

Query: 698  DE-PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGAL 756
            DE  A E  + +    V F+R+  K                 + +  L +QPE LKGG L
Sbjct: 555  DEYKAREAATSILGKTVDFQRKKSK-----------------ASLRRLDDQPEWLKGGKL 597

Query: 757  FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLST 816
              +QLE LN+L   W    NVILADEMGLGKT+ + + +  L+   +   P LV+VPLST
Sbjct: 598  RDYQLEGLNFLVNGWRNDTNVILADEMGLGKTIQSVSMLGFLHNAQEINGPFLVVVPLST 657

Query: 817  MPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSY-KFNVLLTTY 875
            + NW  EF  W P++NVV Y G   +R I +Q+E+        NKK   + KF+ L+TTY
Sbjct: 658  LSNWAKEFRKWLPDMNVVVYVGNRASREICQQHEFFT------NKKGGRHVKFHTLITTY 711

Query: 876  EMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEM 935
            E+IL D + L  + W  L+VDE HRLKN  + L++ L  FS ++++L+TGTPLQN++ E+
Sbjct: 712  EVILKDKAALSKIKWNYLMVDEAHRLKNCEASLYTTLLEFSTKNKLLITGTPLQNSVEEL 771

Query: 936  YNLLNFLQPASFPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKT 993
            + LL+FL P+ F S   F E++ +L++  + E   L K + PH+LRR+ KD  +++PPK 
Sbjct: 772  WALLHFLDPSKFNSKDIFVERYKNLSSFNETELANLHKELRPHILRRVIKDVEKSLPPKI 831

Query: 994  ERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHPYLIPG 1051
            ER++ V++S +Q +YY+ +L +N+Q   N+ KGV   Q S+LNIV++L+K CNHP+L   
Sbjct: 832  ERILRVDMSPLQKQYYKWILERNFQ---NLNKGVRGNQVSLLNIVVELKKCCNHPFLFES 888

Query: 1052 TEPDSGSVEFLHEMRIK----ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
             +   G        +++    +S KL LL  +L  L +  HRVLIFSQM ++LDIL +YL
Sbjct: 889  ADHGYGGDSIGDRNKVERIVMSSGKLVLLDKLLVRLRETNHRVLIFSQMVRMLDILAEYL 948

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
            ++      ++R+DGS     R  A+  FN   S  F FLLSTR+ GLGINLATADTVII+
Sbjct: 949  SLR--GFQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIF 1006

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN---- 1222
            DSD+NP  D+QAM+RAHRIGQ + + +YR V   SVEE IL+ AKKK++LD L +     
Sbjct: 1007 DSDWNPQNDLQAMSRAHRIGQQETVNIYRFVTCKSVEEDILERAKKKMVLDHLVIQKLNA 1066

Query: 1223 ----------KSGS---QKEVEDILRWGTEELFND 1244
                      K GS   + E+  ILR+G EELF +
Sbjct: 1067 EGRLEKKESKKGGSMFDKNELSAILRFGAEELFKE 1101


>gi|242051170|ref|XP_002463329.1| hypothetical protein SORBIDRAFT_02g041910 [Sorghum bicolor]
 gi|241926706|gb|EER99850.1| hypothetical protein SORBIDRAFT_02g041910 [Sorghum bicolor]
          Length = 1685

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 279/693 (40%), Positives = 399/693 (57%), Gaps = 90/693 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENY------KAKYGTTV----INICD--- 658
            EF +KW G+S +H  W   S+L+ V   +K+ NY      + +Y   +    + + D   
Sbjct: 392  EFYIKWKGQSYLHCQWKTLSELQNVSGFKKVINYTKRVAEEQRYKRALSREEVEVHDVGK 451

Query: 659  -------ERWKQPQRVISLRSSKDG---TREAFVKWTGLPYDECTWEK----------LD 698
                   +++ Q +R+ + R   DG     E  VKW GLPY E TWEK          +D
Sbjct: 452  EMELDLIKQYSQVERIFADRVKADGDDLVPEYLVKWQGLPYAESTWEKDTDIDFAQDAID 511

Query: 699  E-PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALF 757
            E  A E  S +    V F+R+                   ++ +  L +QPE LK G L 
Sbjct: 512  EYKAREAASAILGKTVDFQRK-------------------KTSLRRLDDQPEWLKAGKLR 552

Query: 758  PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTM 817
             +QLE LN+L   W    NVILADEMGLGKT+ + + +  L+   +   P LV+VPLST+
Sbjct: 553  DYQLEGLNFLVNGWRNDTNVILADEMGLGKTIQSVSMLGFLHNAQEINGPFLVVVPLSTL 612

Query: 818  PNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEM 877
             NW  EF  W PN+NVV Y G   +R + +Q+E+ +       K     KF+ L+TTYE+
Sbjct: 613  SNWAKEFRKWLPNMNVVIYVGNRASREMCQQHEFFSD-----KKGGRHVKFHTLITTYEV 667

Query: 878  ILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYN 937
            IL D + L  + W  L+VDE HRLKN  + L++ L  FS ++++L+TGTPLQN++ E++ 
Sbjct: 668  ILKDKAVLSKIKWNYLMVDEAHRLKNCEASLYTTLLEFSTKNKLLITGTPLQNSVEELWA 727

Query: 938  LLNFLQPASFPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKTER 995
            LL+FL P  F S  SF E++ +L++  + E   L K + PH+LRR+ KD  +++PPK ER
Sbjct: 728  LLHFLDPVKFNSKDSFVERYKNLSSFNETELANLHKELRPHILRRVIKDVEKSLPPKIER 787

Query: 996  MVPVELSSIQAEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHPYLIPGTE 1053
            ++ VE+S +Q +YY+ +L +N+Q   N+ KGV   Q S+LNIV++L+K CNHP+L    +
Sbjct: 788  ILRVEMSPLQKQYYKWILERNFQ---NLNKGVRGNQVSLLNIVVELKKCCNHPFLFESAD 844

Query: 1054 PDSGSVEFLHEMRIK----ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
               G        +++    +S KL LL  +L  L +  HRVLIFSQM K+LDIL +YL++
Sbjct: 845  HGYGGDSIGDRNKVERIVMSSGKLVLLDKLLVRLRETNHRVLIFSQMVKMLDILAEYLSL 904

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDS 1168
                  ++R+DGS     R  A+  FN   S  F FLLSTR+ GLGINLATADTVII+DS
Sbjct: 905  R--GFQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDS 962

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN------ 1222
            D+NP  D+QAM+RAHRIGQ + + +YR V   SVEE IL+ AKKK++LD L +       
Sbjct: 963  DWNPQNDLQAMSRAHRIGQQETVNIYRFVTCKSVEEDILERAKKKMVLDHLVIQKLNAEG 1022

Query: 1223 --------KSGS---QKEVEDILRWGTEELFND 1244
                    K GS   + E+  ILR+G EELF +
Sbjct: 1023 RLEKKESKKGGSIFDKNELSAILRFGAEELFKE 1055


>gi|219518574|gb|AAI45220.1| Chd9 protein [Mus musculus]
          Length = 2884

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 271/667 (40%), Positives = 375/667 (56%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +       + D  E    P  V 
Sbjct: 714  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVE 773

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 774  VDRILEVSFCEDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 827

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    EQ  E K G  L  +QLE LNWL   W+  +N 
Sbjct: 828  ASRPDTRHLDRP-------PSNIWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNC 880

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 881  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 938

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 939  GSLISRQMIQQYEMYFRDAQGRIIR-GAYRFQAIITTFEMILGGCGELNAIDWRCVIIDE 997

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 998  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1057

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1058 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1117

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1118 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDFHLQ 1174

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1175 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1232

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1233 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1292

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N SG    S+KE+E
Sbjct: 1293 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIE 1352

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1353 DLLRRGA 1359


>gi|218200191|gb|EEC82618.1| hypothetical protein OsI_27196 [Oryza sativa Indica Group]
          Length = 1734

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 280/695 (40%), Positives = 404/695 (58%), Gaps = 91/695 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENY------KAKYGTTV----INICD--- 658
            EF +KW G+S +H  W   S+L+ V   +K+ NY      + +Y  ++    + + D   
Sbjct: 435  EFYIKWKGQSFLHCQWKTLSELQNVSGFKKVLNYMKRVTDELRYKRSLSREEVEVHDVGK 494

Query: 659  -------ERWKQPQRVISLRSSK----DGTREAFVKWTGLPYDECTWEK----------L 697
                   +++ Q +R+ + R SK    D   E  VKW GLPY E TWEK          +
Sbjct: 495  EMELDLIKQYSQVERIFADRVSKVDGDDLVPEYLVKWQGLPYAESTWEKDTDIEFAQDAI 554

Query: 698  DE-PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGAL 756
            DE  A E  + +    V F+R+  K                 + +  L +QPE LKGG L
Sbjct: 555  DEYKAREAATSILGKTVDFQRKKSK-----------------ASLRRLDDQPEWLKGGKL 597

Query: 757  FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLST 816
              +QLE LN+L   W    NVILADEMGLGKT+ + + +  L+   +   P LV+VPLST
Sbjct: 598  RDYQLEGLNFLVNGWRNDTNVILADEMGLGKTIQSVSMLGFLHNAQEINGPFLVVVPLST 657

Query: 817  MPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSY-KFNVLLTTY 875
            + NW  EF  W P++NVV Y G   +R I +Q+E+        NKK   + KF+ L+TTY
Sbjct: 658  LSNWAKEFRKWLPDMNVVVYVGNRASREICQQHEFFT------NKKGGRHVKFHTLITTY 711

Query: 876  EMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEM 935
            E+IL D + L  + W  L+VDE HRLKN  + L++ L  FS ++++L+TGTPLQN++ E+
Sbjct: 712  EVILKDKAALSKIKWNYLMVDEAHRLKNCEASLYTTLLEFSTKNKLLITGTPLQNSVEEL 771

Query: 936  YNLLNFLQPASFPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKT 993
            + LL+FL P+ F S   F E++ +L++  + E   L K + PH+LRR+ KD  +++PPK 
Sbjct: 772  WALLHFLDPSKFNSKDIFVERYKNLSSFNETELANLHKELRPHILRRVIKDVEKSLPPKI 831

Query: 994  ERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHPYLIPG 1051
            ER++ V++S +Q +YY+ +L +N+Q   N+ KGV   Q S+LNIV++L+K CNHP+L   
Sbjct: 832  ERILRVDMSPLQKQYYKWILERNFQ---NLNKGVRGNQVSLLNIVVELKKCCNHPFLFES 888

Query: 1052 TEPDSGSVEFLHEMRIK----ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
             +   G        +++    +S KL LL  +L  L +  HRVLIFSQM ++LDIL +YL
Sbjct: 889  ADHGYGGDSIGDRNKVERIVMSSGKLVLLDKLLVRLRETNHRVLIFSQMVRMLDILAEYL 948

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
            ++      ++R+DGS     R  A+  FN   S  F FLLSTR+ GLGINLATADTVII+
Sbjct: 949  SLR--GFQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIF 1006

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN---- 1222
            DSD+NP  D+QAM+RAHRIGQ + + +YR V   SVEE IL+ AKKK++LD L +     
Sbjct: 1007 DSDWNPQNDLQAMSRAHRIGQQETVNIYRFVTCKSVEEDILERAKKKMVLDHLVIQKLNA 1066

Query: 1223 ----------KSGS---QKEVEDILRWGTEELFND 1244
                      K GS   + E+  ILR+G EELF +
Sbjct: 1067 EGRLEKKESKKGGSMFDKNELSAILRFGAEELFKE 1101


>gi|118343653|ref|NP_001071647.1| chromo-helicase DNA-binding protein [Taeniopygia guttata]
 gi|28975395|gb|AAO61783.1| chromo-helicase DNA-binding protein [Taeniopygia guttata]
          Length = 1806

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 279/682 (40%), Positives = 395/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 318  QYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 377

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 378  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALIAKKF 434

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG---ALFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 435  QARIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHESLGLRDYQLN 488

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 489  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 548

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E    AP +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 549  EIQTRAPQMNAVVYLGDITSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 601

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            S L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 602  SFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 661

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 662  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 720

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 721  ALQKQYYKWILTGNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQE 779

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 780  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 836

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 837  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 896

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 897  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPS 956

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 957  SSTPFNKEELSAILKFGAEELF 978


>gi|77404417|ref|NP_796198.1| chromodomain-helicase-DNA-binding protein 9 [Mus musculus]
 gi|76782010|gb|AAZ73184.2| ciprofibrate-bound protein PRIC320 [Mus musculus]
          Length = 2869

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 271/667 (40%), Positives = 375/667 (56%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +       + D  E    P  V 
Sbjct: 714  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVE 773

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 774  VDRILEVSFCEDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 827

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    EQ  E K G  L  +QLE LNWL   W+  +N 
Sbjct: 828  ASRPDTRHLDRP-------PSNIWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNC 880

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 881  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 938

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 939  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIDWRCVIIDE 997

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 998  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1057

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1058 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1117

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1118 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDFHLQ 1174

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1175 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1232

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1233 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1292

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N SG    S+KE+E
Sbjct: 1293 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIE 1352

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1353 DLLRRGA 1359


>gi|327285131|ref|XP_003227288.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Anolis
            carolinensis]
          Length = 2471

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 269/666 (40%), Positives = 375/666 (56%), Gaps = 60/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   +QL+   +  +KL+ +K K         ++       + + 
Sbjct: 646  EFFVKYKNYSYLHCEWATIAQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEDPFNPDYVEV 705

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 706  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKVREFKRIQSRHPELK 765

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKN 776
            R    +  S  +L              LT   E   G  L  +QLE +NWL   W+  +N
Sbjct: 766  RVARPQAGSWKKL-------------ELTH--EYKNGNQLREYQLEGVNWLLFNWYNRQN 810

Query: 777  VILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
             ILADEMGLGKT+ + AF+  +Y     + P LV+ PLST+ NW  EF  W   +N + Y
Sbjct: 811  CILADEMGLGKTIQSIAFLQEVY-NMGIRGPFLVIAPLSTITNWEREFNTWT-EMNTIVY 868

Query: 837  HGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVD 896
            HG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++D
Sbjct: 869  HGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVIID 927

Query: 897  EGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEK 956
            E HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F + 
Sbjct: 928  EAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKD 987

Query: 957  FNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKN 1016
            F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN
Sbjct: 988  FGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKN 1047

Query: 1017 YQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP-------DSGSVEFLHEMRIKA 1069
            +  L          ++LN +M+LRK CNHPYLI G E        DS      H+  ++A
Sbjct: 1048 FNFLSKGAGHSNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFRDSCHHHVPHDFPLQA 1107

Query: 1070 ----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
                S KL L+  +L  L   GH+VLIFSQM + LDILEDYL  +     YER+DG V  
Sbjct: 1108 MVRSSGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQKR--YLYERIDGRVRG 1165

Query: 1126 GDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HR
Sbjct: 1166 NLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHR 1225

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVED 1232
            IGQSK + VYRL+ R S E  +   A  KL LD+ +  + SG           S+KE+ED
Sbjct: 1226 IGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGREGSIAGIQQFSKKEIED 1285

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 1286 LLRKGA 1291


>gi|159490586|ref|XP_001703254.1| chromodomain-helicase-DNA-binding protein [Chlamydomonas reinhardtii]
 gi|158280178|gb|EDP05936.1| chromodomain-helicase-DNA-binding protein [Chlamydomonas reinhardtii]
          Length = 1219

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/600 (41%), Positives = 366/600 (61%), Gaps = 67/600 (11%)

Query: 681  FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKK----DASEDELPRGKGDC 736
             VKW GLPY ECTWE  ++      S   D ++Q E++ L+     +A+  +  R KG  
Sbjct: 175  LVKWEGLPYAECTWETAEDIIRAGGSAQIDSYLQREQRLLEPGRGVEAARKQF-RIKG-- 231

Query: 737  QQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFIS 796
                  AL  QP  L GG L  +Q+E+LNW+   W +++N+ILADEMGLGKTV   +FI 
Sbjct: 232  ----TRALERQPSYLNGGTLRDYQMESLNWMIYSWSENRNIILADEMGLGKTVQCVSFIG 287

Query: 797  SLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDP 856
            +L  E + + P LV+VPLST+PNW+ EF  W P +N V Y G +++R ++R YE    DP
Sbjct: 288  TLSEELQIRGPFLVVVPLSTVPNWIREFRRWVPFVNAVVYVGDSRSREVLRAYE---CDP 344

Query: 857  DNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFS 916
               +K    YKF VLLTTYE+IL D+  L  + W  L+                 L  + 
Sbjct: 345  SPHHKAARPYKFEVLLTTYELILKDAPILSRIKWAYLLE----------------LMEWH 388

Query: 917  FQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPH 976
            F +++L+TGTPLQN++ E++ LL+FL+P+ FP+  +FE +++ L T   V  L  ++ PH
Sbjct: 389  FGNKLLITGTPLQNSLKELWALLHFLEPSRFPTAEAFEAEYS-LETADSVSGLHGVLRPH 447

Query: 977  MLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIV 1036
            +LRR+ KD  +++PPK ER++ V+++ +Q +YY+ +LT+N++ L    +G    S+LNI+
Sbjct: 448  LLRRVIKDVEKSLPPKNERILRVDMTPLQKQYYKWILTRNFKELNKSSRGGGHVSLLNII 507

Query: 1037 MQLRKVCNHPYLIP-------GTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHR 1089
             +L+K CNHP+L         G+E D  +V+ L    I  S K+ LL  +L+ L   GHR
Sbjct: 508  GELKKCCNHPFLFESAEDNYRGSEEDKSAVDRL----IVPSGKMVLLDKLLRRLKATGHR 563

Query: 1090 VLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLST 1148
            VLIFSQM ++LDI+ DY+ +   P  ++R+DGS     R AA+  FN+ D   F FLLST
Sbjct: 564  VLIFSQMVRVLDIISDYMRLRGFP--HQRLDGSTPAAARHAAMEHFNRPDSPDFAFLLST 621

Query: 1149 RSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQ 1208
            R+ GLGINLATADTVII+DSD+NP  D+QAM+RAHRIGQ++ + +YR V   SVEE IL+
Sbjct: 622  RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTETVNIYRFVTSGSVEEDILE 681

Query: 1209 LAKKKLMLDQLFV---------------NKSGS-------QKEVEDILRWGTEELFNDSP 1246
             AK+K++LD L +                K+G+       + E+  ILR+G E+LF  +P
Sbjct: 682  RAKRKMVLDHLVIQRMDTSGRTILDPSAGKAGASAKQLFGKDELAAILRFGAEDLFKQAP 741


>gi|4733988|gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protein [Arabidopsis
            thaliana]
          Length = 1738

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 280/699 (40%), Positives = 404/699 (57%), Gaps = 87/699 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK-RKLENYKAK------YGTTV----INICD--- 658
            EFL+KW G+S++H  W   S L+ L+  +K+ NY  K      Y T +    I + D   
Sbjct: 463  EFLIKWKGQSHLHCQWKTLSDLQNLSGFKKVLNYTKKVTEEIRYRTALSREEIEVNDVSK 522

Query: 659  -------ERWKQPQRVISLRSSKDG----TREAFVKWTGLPYDECTWEK-----LDEPAL 702
                   ++  Q +R+I+ R SKDG      E  VKW GL Y E TWEK       + A+
Sbjct: 523  EMDLDIIKQNSQVERIIADRISKDGLGDVVPEYLVKWQGLSYAEATWEKDVDIAFAQVAI 582

Query: 703  EKY-SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE-----------IVALTEQPEE 750
            ++Y +    + VQ +         E +  +GKG+   S            +  L EQPE 
Sbjct: 583  DEYKAREVSIAVQGK-------MVEQQRTKGKGENSFSNAELWLLFSVASLRKLDEQPEW 635

Query: 751  LKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLV 810
            L GG L  +QLE LN+L   W    NVILADEMGLGKTV + + +  L    +   P LV
Sbjct: 636  LIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLV 695

Query: 811  LVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNV 870
            +VPLST+ NW  EF  W P +N++ Y G   +R +        +  ++++K     KFN 
Sbjct: 696  VVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREV-------RNKTNDVHKVGRPIKFNA 748

Query: 871  LLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQN 930
            LLTTYE++L D + L  + W  L+VDE HRLKNS ++L++ L  FS ++++L+TGTPLQN
Sbjct: 749  LLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQN 808

Query: 931  NIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQN 988
            ++ E++ LL+FL P  F +   F E + +L++  + E   L   + PH+LRR+ KD  ++
Sbjct: 809  SVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNESELANLHLELRPHILRRVIKDVEKS 868

Query: 989  IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHP 1046
            +PPK ER++ VE+S +Q +YY+ +L +N+    ++ KGV   Q S+LNIV++L+K CNHP
Sbjct: 869  LPPKIERILRVEMSPLQKQYYKWILERNFH---DLNKGVRGNQVSLLNIVVELKKCCNHP 925

Query: 1047 YLIP----GTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDI 1102
            +L      G   D      L ++ I +S KL +L  +L  L +  HRVLIFSQM ++LDI
Sbjct: 926  FLFESADHGYGGDINDNSKLDKI-ILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDI 984

Query: 1103 LEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATAD 1161
            L +YL++      ++R+DGS     RQ A+  FN   S  F FLLSTR+ GLGINLATAD
Sbjct: 985  LAEYLSLR--GFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATAD 1042

Query: 1162 TVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            TV+I+DSD+NP  D+QAM+RAHRIGQ + + +YR V   SVEE IL+ AK+K++LD L +
Sbjct: 1043 TVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVI 1102

Query: 1222 N-------------KSGS---QKEVEDILRWGTEELFND 1244
                          K GS   + E+  ILR+G EELF +
Sbjct: 1103 QKLNAEGRLEKRETKKGSNFDKNELSAILRFGAEELFKE 1141


>gi|395334519|gb|EJF66895.1| hypothetical protein DICSQDRAFT_158547 [Dichomitus squalens LYAD-421
            SS1]
          Length = 1586

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/591 (42%), Positives = 357/591 (60%), Gaps = 36/591 (6%)

Query: 680  AFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQF--ERQTLKKDASEDELPRGKGDCQ 737
            AF+KW  L YD+ +W+         Y+       +F   R  +     ++++ R      
Sbjct: 535  AFIKWDDLGYDDASWDSPPRSDDASYAAFVKALERFIAARSVIVSTRGKNDVARDGARWL 594

Query: 738  QSEIVALTEQPE-----ELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSAC 792
                  +  QP+     +LK   L P Q+E +NWL   W+  ++ ILADEMGLGKTV   
Sbjct: 595  VKHKFTVDNQPKLGQSAQLK---LMPFQVEGVNWLCHNWNTLQHCILADEMGLGKTVQIV 651

Query: 793  AFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWH 852
             FI  +   FK   P LV+VP ST+ NW+ EF  WAP L VV ++G AKAR II++YE  
Sbjct: 652  TFIGYIVSAFKC-FPALVVVPNSTITNWVREFERWAPKLRVVPFYGDAKAREIIKKYELF 710

Query: 853  ASDPDNLNKKTSSYKFNVLLTTYEMILADSSH---LRGVP-WEVLVVDEGHRLKNSGSKL 908
             S P      T+  K++VL+TTYE I          +  P WE+LVVDEG RLK+  S +
Sbjct: 711  HSRP---TSGTTGAKYHVLVTTYETITNTKEFGPVFKSTPSWEMLVVDEGQRLKSDASLI 767

Query: 909  FSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEE 968
            F  L     +HR+++TGTPL NNI E++NL+NFL P  +  L +  +++ +LT  + V +
Sbjct: 768  FKRLKELKSKHRIIMTGTPLNNNIRELFNLMNFLDPDEWADLEALSKQYEELTD-ELVAD 826

Query: 969  LKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNI----- 1023
            L   + P+ LRR+K + +Q +PPK E +VPV ++ +Q E YR++L++N  ILR++     
Sbjct: 827  LHTRLKPYFLRRIKSEVLQ-LPPKNEVIVPVSMAPLQKEIYRSILSQNLDILRSLTEPNA 885

Query: 1024 --GKG-VAQQSMLNIVMQLRKVCNHPYLI-PGTEPDSGSVEFLHEMRIKASAKLTLLHSM 1079
               KG V + +M N++MQLRK   HPYL+ P  EP   S    HE  I ASAKL LL +M
Sbjct: 886  SSSKGNVTKTNMNNMLMQLRKCVQHPYLVSPNIEPKGLSPTETHERLIGASAKLRLLKTM 945

Query: 1080 LKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-D 1138
            L  L   GHRVL+FSQ    LDI+ED+L  E    TY R+DG+    DRQ  +  FN+ D
Sbjct: 946  LPKLRARGHRVLLFSQFAIALDIIEDFLVGEG--ITYLRLDGNTKQADRQKGMDEFNKKD 1003

Query: 1139 KSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVV 1198
               F++LL+TR+ G+GINL +ADTVII+D DFNPH D+QA+ RAHR GQ+K +LV++L+V
Sbjct: 1004 SDVFIYLLTTRAGGVGINLWSADTVIIFDPDFNPHQDLQAIARAHRYGQTKTVLVFKLMV 1063

Query: 1199 RASVEERILQLAKKKLMLDQLFVNK----SGSQKEVEDILRWGTEELFNDS 1245
            + S EERI+Q  KKKL+LD L V K    SGS+++V+ IL +G + LF ++
Sbjct: 1064 KDSAEERIMQTGKKKLILDHLIVQKMDDESGSREDVQSILLFGAKALFEET 1114


>gi|440297057|gb|ELP89787.1| CHD3-type chromatin-remodeling factor PICKLE, putative [Entamoeba
            invadens IP1]
          Length = 1343

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 267/688 (38%), Positives = 399/688 (57%), Gaps = 76/688 (11%)

Query: 613  EFLVKWVGKSNIHNSWIP-ESQLKVLAKRKLENY-------KAKYGTTVINICD------ 658
            EF VKW   S  HN+W+  E+   +    KL+NY          Y  +     +      
Sbjct: 230  EFEVKWGDMSYRHNTWVTLETSKDMKGYLKLKNYIKTIRLNGEMYANSTAEEIEAYNIEL 289

Query: 659  -------ERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDL 711
                   E +K+ +R++S+    D  +  FVKW GL Y EC+WE   +  L +       
Sbjct: 290  ESQQALVESYKRVERIVSVYL--DEGKTYFVKWVGLQYGECSWESEGDLTLPEDKEAIRQ 347

Query: 712  FVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCW 771
            F + E++TL K A +          ++  I  + ++  +LK   L  +Q+E +NWL   +
Sbjct: 348  FYEREQETLTKKAEK---------LKRRFIKYVDDENAKLK---LRDYQIEGVNWLTYAF 395

Query: 772  HKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNL 831
             K+ NVILADEMGLGKT+    F+  LY +     P LV+VPLST+ NW  EFA WAP +
Sbjct: 396  SKNVNVILADEMGLGKTIQTITFLRHLYDKCNYVGPHLVVVPLSTINNWAKEFAKWAPRM 455

Query: 832  NVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWE 891
            N + Y G  ++RAIIR+ E  ++        +   KFNVLLTT+E+++ D   L    W 
Sbjct: 456  NCIVYTGDGESRAIIRKTEMEST--------SKKPKFNVLLTTFELVIKDQGLLNLYHWG 507

Query: 892  VLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLS 951
             L VDE HRLKN+  +L+  L +   + ++L+TGTPLQN + E+++LL+FL P  FP+  
Sbjct: 508  YLAVDEAHRLKNAEGQLYEALLNLHTECKLLITGTPLQNTLKELWSLLHFLHPEQFPNFE 567

Query: 952  SFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRA 1011
             FE K + +   +++++    + P++LRR+KK+  +++PPK ER++ V LS +Q +YYR 
Sbjct: 568  DFE-KTHKVNAAEELQKFHSELKPYILRRMKKEVEKSLPPKKERILRVGLSGLQKQYYRW 626

Query: 1012 MLTKNYQILRNIGKGVAQQ--SMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKA 1069
            ++TKN   L+   K V QQ  S++NI+++L+K+CNHP LI      + S+ +  +  I++
Sbjct: 627  IITKNESALK---KAVKQQKMSLMNIMIELKKLCNHPLLI------NQSISYDEQGLIES 677

Query: 1070 SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQ 1129
              K+ LL  +L  L K+GHRVLIFSQM ++LDIL +Y+       +Y+R+DGS+    RQ
Sbjct: 678  CGKMVLLDKLLVELKKDGHRVLIFSQMVRMLDILAEYMKKR--GFSYQRLDGSMGKEPRQ 735

Query: 1130 AAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 1188
             A+ +FN   SR F FLLSTR+ GLGINL +ADTVIIYDSD+NP  D+QA  R HRIGQ 
Sbjct: 736  RAMEQFNAKDSRDFCFLLSTRAGGLGINLTSADTVIIYDSDWNPQNDLQAQARCHRIGQE 795

Query: 1189 KRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN----------KSGSQKEVEDILRWGT 1238
            K + +YRLV   SVEE+IL  AKKK++LD L +           +S  + E++ I+++G 
Sbjct: 796  KMVNIYRLVTEGSVEEKILMSAKKKMVLDHLVIQTMEKKKKNGKESFEKDEIDRIIKFGA 855

Query: 1239 EELFNDSPGINGKDMGEN-NTSIEEAVR 1265
              +F       GKD GE     +EE ++
Sbjct: 856  ANIF-------GKDEGEQKKVDLEEIMK 876


>gi|402224068|gb|EJU04131.1| hypothetical protein DACRYDRAFT_76460 [Dacryopinax sp. DJM-731 SS1]
          Length = 1461

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 255/585 (43%), Positives = 357/585 (61%), Gaps = 27/585 (4%)

Query: 659  ERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
            E +K  +R++S R  ++   E F KW GL Y +CTWE    LD+  LE      D +  F
Sbjct: 262  EGFKTIERILSDRQGEEEI-EYFCKWKGLQYQDCTWETKKNLDQ--LEDGVKAIDQYSAF 318

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK--GGALFPHQLEALNWLRKCWHK 773
                     SE   P G     +     + E P  +K  GG L P QL  LNWL+  W K
Sbjct: 319  IHTPYAPQRSE-HYPTG----SRPGYKPMKEDPGYIKRTGGQLKPFQLHGLNWLQHLWSK 373

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
             +N ILADEMGLGKTV    F+S L        P  V+VPLST+P W  +F  WAP+L  
Sbjct: 374  GENGILADEMGLGKTVQTVTFLSWLAHSRHQHGPFCVVVPLSTLPAWCDQFNAWAPDLYW 433

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
            V ++G A++R +IR+YE++     N        +FNVL+TTYE IL D   L+G+ W+ L
Sbjct: 434  VVWYGSARSREVIREYEFYTGPKGNRKP-----RFNVLITTYEYILKDRDTLQGIKWQAL 488

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
             VDE HRLKNS ++L+  L  F+   ++L+TGTPLQN+I E+  L++FL P  + SL++ 
Sbjct: 489  AVDEAHRLKNSDAQLYETLFGFNCAFKLLITGTPLQNSIKELLALMHFLAPQHY-SLTTA 547

Query: 954  EEKFNDLTTTQK--VEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRA 1011
            +E  +     Q+  +E+L+  ++  MLRRLK+D ++++P K+ER++ VE+S++Q  YY+ 
Sbjct: 548  DEYEHATPEEQQKFIEQLQDQLSGMMLRRLKRDVVKDMPTKSERILRVEMSALQRHYYKN 607

Query: 1012 MLTKNYQILRNIGKGVA---QQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIK 1068
            +LTKN+ +L+N G       Q S+LNI M+L+K  NHPYL  G E  S + E   +  + 
Sbjct: 608  ILTKNFVVLKNKGPSGGPGPQISLLNIAMELKKAANHPYLFDGCEEHSDNPEEQLKGIVM 667

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            +S K+ LL  +L  L  + HRVLIFSQM +LLDIL DYL +      ++R+DG+VS   R
Sbjct: 668  SSGKMVLLDKLLHRLKTDSHRVLIFSQMVRLLDILSDYLTMR--NYQHQRLDGTVSSEIR 725

Query: 1129 QAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            + AI  FN + S+ FVFLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM RAHRIGQ
Sbjct: 726  RKAIEHFNSEGSQDFVFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQ 785

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVED 1232
               + VYR V + +VEE +LQ AK K+ L+   V ++ +    ED
Sbjct: 786  KSHVSVYRFVSKDTVEEDVLQRAKAKMALEYAVVGQTDTSGFTED 830


>gi|148679122|gb|EDL11069.1| mCG141427 [Mus musculus]
          Length = 2699

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 271/667 (40%), Positives = 375/667 (56%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +       + D  E    P  V 
Sbjct: 714  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVE 773

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 774  VDRILEVSFCEDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 827

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    EQ  E K G  L  +QLE LNWL   W+  +N 
Sbjct: 828  ASRPDTRHLDRP-------PSNIWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNC 880

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 881  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 938

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 939  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIDWRCVIIDE 997

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 998  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1057

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1058 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1117

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1118 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDFHLQ 1174

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1175 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1232

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1233 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1292

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N SG    S+KE+E
Sbjct: 1293 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIE 1352

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1353 DLLRRGA 1359


>gi|26340418|dbj|BAC33872.1| unnamed protein product [Mus musculus]
          Length = 1081

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 278/680 (40%), Positives = 393/680 (57%), Gaps = 69/680 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 315  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 374

Query: 653  VINICDERWKQPQ---RVI--SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
               + D+  KQ Q   R+I  S + S  G  + + KW GLPY EC+WE   + AL     
Sbjct: 375  QQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECSWE---DGALISKKF 431

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLEAL 764
             T +   F R   K    +D     K   Q+   VAL +QP  + G     L  +QL  L
Sbjct: 432  QTCIDEYFSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGL 487

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  E 
Sbjct: 488  NWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREI 547

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D + 
Sbjct: 548  QTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDKAF 600

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+ P
Sbjct: 601  LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP 660

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S++
Sbjct: 661  EKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL 719

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVEFL 1062
            Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E L
Sbjct: 720  QKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEAL 778

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+DGS
Sbjct: 779  QHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLDGS 835

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA  R
Sbjct: 836  IKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR 895

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS----- 1226
            AHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS     
Sbjct: 896  AHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSS 955

Query: 1227 ----QKEVEDILRWGTEELF 1242
                ++E+  IL++G EELF
Sbjct: 956  TPFNKEELSAILKFGAEELF 975


>gi|343428014|emb|CBQ71539.1| probable CHD1-transcriptional regulator [Sporisorium reilianum SRZ2]
          Length = 1752

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 266/679 (39%), Positives = 395/679 (58%), Gaps = 74/679 (10%)

Query: 614  FLVKWVGKSNIHNSWIPESQLK--------------VLAKRKL---ENYKAKYGTTVINI 656
            F+VKW G S++H++      LK              V  + KL   + + ++     + I
Sbjct: 323  FIVKWKGYSHLHDTHETYDFLKRYRGFKRVDNYIKSVFQREKLLRSDPHASREDIEALQI 382

Query: 657  CDER-------WKQPQRVISLRSSKDGTREAF------VKWTGLPYDECTWEKLDEPALE 703
              ER       +K  +R+I+ R++      A+      VKW GLPY +CTWE  +E    
Sbjct: 383  EKERQAELIESFKTVERIIAERNNPANKDIAYPHLAYLVKWKGLPYGDCTWEAEEE---- 438

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ-QSEIVALTEQPEELKGGALFPHQLE 762
                + D+  Q     +++ AS     R +   Q + +   +TEQP  +  G L   Q+ 
Sbjct: 439  ----INDIAQQAISAYVERSASSTVPWRSQNFSQGRPKYTRMTEQPAYISAGTLKDFQMT 494

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K++N ILADEMGLGKTV   +F+S L+       P LV+VPLST+P W+ 
Sbjct: 495  GLNWLAYLWSKNENGILADEMGLGKTVQTVSFLSYLFHSCYQYGPFLVVVPLSTLPAWMN 554

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            +F  WAP+LN + Y G + +R +IR+YE+    P  +       KFNVL+TTYE IL D 
Sbjct: 555  QFEHWAPDLNAIAYMGNSASREMIREYEF--GPPKKM-------KFNVLVTTYEFILKDR 605

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L  + W+ L VDE HRLKNS ++L+  LNSF    ++L+TGTPLQNN+ E+  LL+FL
Sbjct: 606  AELGQIKWQYLAVDEAHRLKNSEAQLYEALNSFHAAGKLLITGTPLQNNVKELIALLHFL 665

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
            +P  F     F+   ND+     ++EL + +   MLRRLKKD ++ +P K+E+++ VE+S
Sbjct: 666  RPDQFDLDVDFD--INDVDQAV-IKELHEKLDNVMLRRLKKDVIKELPTKSEKILRVEMS 722

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL 1062
            ++Q   Y+A+LT+NY +L   G   AQ S+LNI ++L+K  NHPYL  GTE  S + E  
Sbjct: 723  AMQQRMYKAILTRNYSLLS--GATTAQFSLLNIAIELKKASNHPYLFDGTEVISDNREET 780

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
             +  +  S K+ LL  +L  L  +GHRVLIFSQM ++LDIL DY+++      ++R+DG+
Sbjct: 781  LKGLVMHSGKMVLLDKLLARLKADGHRVLIFSQMVRMLDILSDYMSLR--GYIHQRLDGT 838

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            VS   R+ AI  FN + S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM R
Sbjct: 839  VSSEVRKKAIEHFNAEGSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMAR 898

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK---SG------------- 1225
            AHR+     + V+R + + +VEE +L+ AK+K++L+   +++   SG             
Sbjct: 899  AHRLNSKFHVSVFRFLTKDTVEEDVLERAKRKMVLEYAIIHQMDTSGTNFAPKASAKNQQ 958

Query: 1226 --SQKEVEDILRWGTEELF 1242
              S++E+  IL++G + +F
Sbjct: 959  QFSKEELGAILKFGAQNMF 977


>gi|392354899|ref|XP_002728634.2| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Rattus
            norvegicus]
          Length = 2778

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 270/667 (40%), Positives = 376/667 (56%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +       + D  E    P  V 
Sbjct: 714  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVE 773

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 774  VDRILEVSFCEDKDTGESVVYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 827

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D  + + P        S I    +Q  E K G  L  +QLE LNWL   W+  +N 
Sbjct: 828  ASRPDTRQLDRP-------PSNIWKKIDQSREYKNGNQLREYQLEGLNWLLFNWYNRRNC 880

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 881  ILADEMGLGKTIQSITFLYEVLLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 938

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 939  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 997

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 998  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1057

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1058 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKRLAPKEETIIEVELTNIQKKYYRAILEKNF 1117

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1118 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKIIGEFRDTYNPSASDFHLQ 1174

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1175 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1232

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1233 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1292

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N SG    S+KE+E
Sbjct: 1293 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIE 1352

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1353 DLLRRGA 1359


>gi|392334310|ref|XP_002725429.2| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
            [Rattus norvegicus]
          Length = 2883

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 270/667 (40%), Positives = 376/667 (56%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +       + D  E    P  V 
Sbjct: 714  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVE 773

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 774  VDRILEVSFCEDKDTGESVVYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 827

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D  + + P        S I    +Q  E K G  L  +QLE LNWL   W+  +N 
Sbjct: 828  ASRPDTRQLDRP-------PSNIWKKIDQSREYKNGNQLREYQLEGLNWLLFNWYNRRNC 880

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 881  ILADEMGLGKTIQSITFLYEVLLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 938

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 939  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 997

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 998  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1057

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1058 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKRLAPKEETIIEVELTNIQKKYYRAILEKNF 1117

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1118 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKIIGEFRDTYNPSASDFHLQ 1174

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1175 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1232

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1233 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1292

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N SG    S+KE+E
Sbjct: 1293 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIE 1352

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1353 DLLRRGA 1359


>gi|157107192|ref|XP_001649666.1| chromodomain helicase DNA binding protein [Aedes aegypti]
 gi|108879647|gb|EAT43872.1| AAEL004716-PB [Aedes aegypti]
          Length = 2001

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 275/690 (39%), Positives = 397/690 (57%), Gaps = 89/690 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENY-----------KAKYGTTVINI-- 656
            ++L+KW G S +H +W  +  LK   V   +KLENY           K + G   I+   
Sbjct: 413  QYLIKWAGWSYLHCTWESDETLKEQKVKGMKKLENYIKREKDIEYWRKYQAGPEDIDYYE 472

Query: 657  CDERWKQP--------QRVIS-LRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
            C +  +Q         +RVI+ +   + G  +   KW  LPY + TWE      ++K+  
Sbjct: 473  CQQELQQDLLKSYYNVERVIAQVEKPEGGGIDYLCKWESLPYADSTWEDA-SLIVKKWEK 531

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEEL---KGGALFPHQ 760
              + F   +R   K+  S+         C+    + +   L  QP+ L   +G  L  +Q
Sbjct: 532  KVEEFQ--DRDNSKRTPSKH--------CKVIRSRPKFHHLKSQPDYLGEDRGLKLRDYQ 581

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            ++ LNWL   W K  +VILADEMGLGKT+    F+  L+   +   P L +VPLSTM  W
Sbjct: 582  MDGLNWLVLTWCKENSVILADEMGLGKTIQTICFLYYLFKAQQLYGPFLCVVPLSTMTAW 641

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
              EFA+WAP +NVV Y G   +R IIRQYEW        N+K    KFN +LTTYE++L 
Sbjct: 642  QREFAIWAPEMNVVTYLGDVASREIIRQYEWCFP-----NQKL---KFNAILTTYEILLK 693

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D + L  V W VL+VDE HRLKN  S L+  L  F   +R+L+TGTPLQN++ E++ LL+
Sbjct: 694  DKTFLGSVSWAVLLVDEAHRLKNDDSLLYKALEEFDTNYRLLITGTPLQNSLKELWALLH 753

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
            F+ P  F +  SFE  + + +  +   +L K + P++LRR+KKD  +++P K E+++ VE
Sbjct: 754  FIMPNRFDTWESFERLYGNTSNDKSYTKLHKELEPYILRRVKKDVEKSLPAKVEQILRVE 813

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            ++S+Q +YYR +LTKN+  LR   KG +  + LNI+++L+K CNH  L   T+P+    E
Sbjct: 814  MTSLQRQYYRWILTKNFDALRKGTKG-SINTFLNIMIELKKCCNHALL---TKPE----E 865

Query: 1061 FLHEMR--------IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFG 1112
            F ++          +K S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL     
Sbjct: 866  FENQTNQDEVVVQLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQKRHF 925

Query: 1113 PKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFN 1171
              +++R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLATADTVII+DSD+N
Sbjct: 926  --SFQRLDGSIKGELRKQALDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWN 983

Query: 1172 PHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---------- 1221
            P  D+QA  RAHRIGQ  ++ +YRLV   SVEE I++ AKKK++LD L +          
Sbjct: 984  PQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEDIVERAKKKMVLDHLVIQRMDTTGRTV 1043

Query: 1222 -NKSG--------SQKEVEDILRWGTEELF 1242
             +K+G        ++ E+  IL++G EELF
Sbjct: 1044 LDKNGGSNSTNPFNKDELSAILKFGAEELF 1073


>gi|157107190|ref|XP_001649665.1| chromodomain helicase DNA binding protein [Aedes aegypti]
 gi|108879646|gb|EAT43871.1| AAEL004716-PA [Aedes aegypti]
          Length = 2002

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 275/690 (39%), Positives = 397/690 (57%), Gaps = 89/690 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENY-----------KAKYGTTVINI-- 656
            ++L+KW G S +H +W  +  LK   V   +KLENY           K + G   I+   
Sbjct: 413  QYLIKWAGWSYLHCTWESDETLKEQKVKGMKKLENYIKREKDIEYWRKYQAGPEDIDYYE 472

Query: 657  CDERWKQP--------QRVIS-LRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
            C +  +Q         +RVI+ +   + G  +   KW  LPY + TWE      ++K+  
Sbjct: 473  CQQELQQDLLKSYYNVERVIAQVEKPEGGGIDYLCKWESLPYADSTWEDA-SLIVKKWEK 531

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEEL---KGGALFPHQ 760
              + F   +R   K+  S+         C+    + +   L  QP+ L   +G  L  +Q
Sbjct: 532  KVEEFQ--DRDNSKRTPSKH--------CKVIRSRPKFHHLKSQPDYLGEDRGLKLRDYQ 581

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            ++ LNWL   W K  +VILADEMGLGKT+    F+  L+   +   P L +VPLSTM  W
Sbjct: 582  MDGLNWLVLTWCKENSVILADEMGLGKTIQTICFLYYLFKAQQLYGPFLCVVPLSTMTAW 641

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
              EFA+WAP +NVV Y G   +R IIRQYEW        N+K    KFN +LTTYE++L 
Sbjct: 642  QREFAIWAPEMNVVTYLGDVASREIIRQYEWCFP-----NQKL---KFNAILTTYEILLK 693

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D + L  V W VL+VDE HRLKN  S L+  L  F   +R+L+TGTPLQN++ E++ LL+
Sbjct: 694  DKTFLGSVSWAVLLVDEAHRLKNDDSLLYKALEEFDTNYRLLITGTPLQNSLKELWALLH 753

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
            F+ P  F +  SFE  + + +  +   +L K + P++LRR+KKD  +++P K E+++ VE
Sbjct: 754  FIMPNRFDTWESFERLYGNTSNDKSYTKLHKELEPYILRRVKKDVEKSLPAKVEQILRVE 813

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            ++S+Q +YYR +LTKN+  LR   KG +  + LNI+++L+K CNH  L   T+P+    E
Sbjct: 814  MTSLQRQYYRWILTKNFDALRKGTKG-SINTFLNIMIELKKCCNHALL---TKPE----E 865

Query: 1061 FLHEMR--------IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFG 1112
            F ++          +K S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL     
Sbjct: 866  FENQTNQDEVVVQLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQKRHF 925

Query: 1113 PKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFN 1171
              +++R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLATADTVII+DSD+N
Sbjct: 926  --SFQRLDGSIKGELRKQALDHFNAEGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWN 983

Query: 1172 PHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---------- 1221
            P  D+QA  RAHRIGQ  ++ +YRLV   SVEE I++ AKKK++LD L +          
Sbjct: 984  PQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEDIVERAKKKMVLDHLVIQRMDTTGRTV 1043

Query: 1222 -NKSG--------SQKEVEDILRWGTEELF 1242
             +K+G        ++ E+  IL++G EELF
Sbjct: 1044 LDKNGGSNSTNPFNKDELSAILKFGAEELF 1073


>gi|149032671|gb|EDL87541.1| rCG44314 [Rattus norvegicus]
          Length = 2698

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 270/667 (40%), Positives = 376/667 (56%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +       + D  E    P  V 
Sbjct: 714  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVE 773

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 774  VDRILEVSFCEDKDTGESVVYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 827

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D  + + P        S I    +Q  E K G  L  +QLE LNWL   W+  +N 
Sbjct: 828  ASRPDTRQLDRP-------PSNIWKKIDQSREYKNGNQLREYQLEGLNWLLFNWYNRRNC 880

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 881  ILADEMGLGKTIQSITFLYEVLLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 938

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 939  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 997

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 998  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1057

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1058 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKRLAPKEETIIEVELTNIQKKYYRAILEKNF 1117

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1118 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKIIGEFRDTYNPSASDFHLQ 1174

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1175 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1232

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1233 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1292

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N SG    S+KE+E
Sbjct: 1293 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIE 1352

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1353 DLLRRGA 1359


>gi|409051824|gb|EKM61300.1| hypothetical protein PHACADRAFT_180431 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1845

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 263/634 (41%), Positives = 375/634 (59%), Gaps = 41/634 (6%)

Query: 680  AFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQF--ERQTLKKDASEDELPRGKGDCQ 737
             F KWT L Y++ TWE         +      F +F   R+ +    S+D+     G  +
Sbjct: 810  GFFKWTSLGYEDSTWESPPRKGEAGWPAFETSFERFLSAREVIVPVLSKDDQKTFDGRPK 869

Query: 738  QSEIVALTEQPE---ELKGGA---LFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSA 791
               +   T  PE   EL  G+   L P Q+E +NWL   W   ++ ILADEMGLGKTV  
Sbjct: 870  DKFMRNYTFTPEFQPELGQGSGLKLMPFQVEGVNWLCNNWWNLQHCILADEMGLGKTVQI 929

Query: 792  CAFISSLYCEFK----AKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
              F+  +   F     +  P LV+VP ST+ NW+ E   WAPNL VV ++G +KAR IIR
Sbjct: 930  ATFLGQIIKGFDKLPFSAYPALVVVPNSTITNWIRELERWAPNLRVVPFYGDSKAREIIR 989

Query: 848  QYE-WHASDPDNLNKKTSSYKFNVLLTTYEMILAD---SSHLRGVP-WEVLVVDEGHRLK 902
            QYE +H +       KT+  KF+VL+TTYE         +  + +P WEVLVVDEG RLK
Sbjct: 990  QYELYHPA----AQAKTTGAKFHVLVTTYETFTNARDIGTLFKAMPRWEVLVVDEGQRLK 1045

Query: 903  NSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTT 962
            +  S LF  L   +  HR++LTGTPL NNI E++NL+NFL P  + +L +  ++  +LT 
Sbjct: 1046 SDSSLLFKKLKELNTIHRIILTGTPLNNNIRELFNLMNFLNPLEWNNLETLSKEHEELTE 1105

Query: 963  TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN 1022
             +KV EL   + P+ LRR+K + +Q +PPK E +VPV ++ +Q E YR++L++N  +LR+
Sbjct: 1106 -EKVRELHTRLRPYFLRRIKSEVLQ-LPPKNEVIVPVSMAPLQKEVYRSLLSQNVDVLRS 1163

Query: 1023 IGKGVA-----------QQSMLNIVMQLRKVCNHPYLIPG-TEPDSGSVEFLHEMRIKAS 1070
            I   VA           + +M NI+MQLRK   HPYL+    EP   S + +HE  I AS
Sbjct: 1164 IALNVATGGSRINAAVKKSNMNNILMQLRKCLQHPYLVSADIEPPGLSSKEVHERLIGAS 1223

Query: 1071 AKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQA 1130
            AKL +L  ML  L   GHRVL+FSQ +  L+++ED+L  E G K Y R+DGS    +RQ 
Sbjct: 1224 AKLIMLKMMLPKLKARGHRVLLFSQFSIALNVVEDFLVGE-GIK-YLRLDGSTKQAERQK 1281

Query: 1131 AITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSK 1189
             +  FN+ D   F+++LSTR+ G+GINL TADTVII+D DFNPH D+QA+ RAHR GQ K
Sbjct: 1282 DMDEFNKPDSDIFIYILSTRAGGVGINLTTADTVIIFDPDFNPHQDLQAIARAHRYGQQK 1341

Query: 1190 RLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK---SGSQKEVEDILRWGTEELFNDSP 1246
              LV++ +V+ S EERI+Q  KKKL+LD L V K     S+++V+ IL +G + LF DS 
Sbjct: 1342 TCLVFKFMVKDSAEERIMQTGKKKLVLDHLIVQKMDDKDSEEDVKSILMFGAQTLFEDSE 1401

Query: 1247 GINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGD 1280
              + +D+  ++  I++ +   E++  ++    G+
Sbjct: 1402 TQSSRDIHYSDHDIQQLIEKTEKEGEQQEPAAGE 1435


>gi|451848354|gb|EMD61660.1| hypothetical protein COCSADRAFT_96653 [Cochliobolus sativus ND90Pr]
          Length = 1577

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 274/670 (40%), Positives = 386/670 (57%), Gaps = 81/670 (12%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKA------KYGTTVINICDERWKQP 664
            +E+L+KW  K++ H++W            RKL+NY         Y  +  N   E ++Q 
Sbjct: 295  FEYLIKWQDKAHYHSTWEDYKTASAYKGIRKLDNYYKGPVQNDMYYHSRKNEDPEEFEQH 354

Query: 665  -----------------QRVISLRSSKDGTREAFVKWTGLPYDECTWE------KLDEPA 701
                             +RVI  R  +D T E FVKW GL Y+ CTWE      +L +  
Sbjct: 355  MVAREAERESQLDFHIVERVIDTRDGEDET-EYFVKWKGLTYEFCTWEPASLVSRLSQTE 413

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQS------EIVALTEQPEELKGGA 755
            +++Y              L + A+     R   D ++S      + V +  QP+ +K G 
Sbjct: 414  IDRY--------------LDRSAN-----RPTSDLRESNPNTRRKFVKMDTQPDYIKFGQ 454

Query: 756  LFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLS 815
            L   QL+ +N+L   W +  NVILADEMGLGKTV   +FI+ L  + +   P + +VPLS
Sbjct: 455  LRSFQLQGVNFLAHNWCRGTNVILADEMGLGKTVQTVSFINWLRHDRRQDGPMICVVPLS 514

Query: 816  TMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTY 875
            TMP W   F  W P++N V Y G  +AR II++ E      DN  KK    KFNVLLTTY
Sbjct: 515  TMPAWADTFNNWTPDVNYVIYTGREEARNIIKEKELLV---DNNPKKV---KFNVLLTTY 568

Query: 876  EMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEM 935
            E +LAD   L+ + W+ L VDE HRLKN  S+L+  L +F+   R+L+TGTP+QN +GE+
Sbjct: 569  EYVLADWQFLQSIKWQFLAVDEAHRLKNRESQLYERLTAFNAPCRLLITGTPIQNTLGEL 628

Query: 936  YNLLNFLQPASFPSLSSFEEKFNDLTT---TQKVEELKKLVAPHMLRRLKKDAMQNIPPK 992
              L++FL P       S +E   DL++   +QK+ EL   + P+M+RR K+    ++PPK
Sbjct: 629  AALMDFLMPGKI----SVDEHV-DLSSEDASQKLAELSSAIQPYMIRRTKEKVENDLPPK 683

Query: 993  TERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT 1052
            +E+++ VELS IQ EYY+ +LT+NY+ L   G G  +QS+LNIVM+L+K  NH  L P  
Sbjct: 684  SEKILRVELSDIQLEYYKNILTRNYEALNEGGVG-HKQSLLNIVMELKKASNHALLFPNA 742

Query: 1053 EPD---SG-SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
            E     SG S E   +  I +S K+ LL  +L  L  +GHRVLIFSQM  +LDIL DYL 
Sbjct: 743  ESKLVKSGCSKEETLKALITSSGKMMLLDRLLGKLKADGHRVLIFSQMVHMLDILTDYLK 802

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYD 1167
            +      ++R+DG+V   +R+ AI  FN   S  + FLLSTR+ GLGINL TADTV+I+D
Sbjct: 803  LRN--YAFQRLDGTVPAAERKIAIDHFNAPGSEDYCFLLSTRAGGLGINLMTADTVVIFD 860

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS- 1226
            SD+NP AD+QAM RAHRIGQ K + VYRLV + ++EE IL+ A+ K ML+ + + +  + 
Sbjct: 861  SDWNPQADLQAMARAHRIGQQKPVSVYRLVSKDTIEEEILERARNKRMLEFITIQRGVTD 920

Query: 1227 --QKEVEDIL 1234
              QKE+ D +
Sbjct: 921  RQQKELNDKM 930


>gi|354471657|ref|XP_003498057.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Cricetulus
            griseus]
          Length = 2864

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 269/667 (40%), Positives = 376/667 (56%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +       + D  E    P  V 
Sbjct: 716  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVE 775

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 776  VDRILEVSFCEDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 829

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
            + + D    + P        S I    +Q  E K G  L  +QLE LNWL   W+  +N 
Sbjct: 830  SSRPDTRHLDRP-------PSNIWKKIDQSREYKNGNQLREYQLEGLNWLLFNWYNRRNC 882

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 883  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 940

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 941  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 999

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 1000 AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1059

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1060 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1119

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1120 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDFHLQ 1176

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1177 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1234

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1235 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1294

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+ +  + SG           S+KE+E
Sbjct: 1295 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDGTVSGIQQLSKKEIE 1354

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1355 DLLRRGA 1361


>gi|440904435|gb|ELR54952.1| Chromodomain-helicase-DNA-binding protein 1, partial [Bos grunniens
            mutus]
          Length = 1777

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 273/680 (40%), Positives = 391/680 (57%), Gaps = 73/680 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 298  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 357

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE  D   + K   
Sbjct: 358  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE--DGALISK--- 412

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLEAL 764
                  +F+    +  +        K   Q+   VAL +QP  + G     L  +QL  L
Sbjct: 413  ------KFQACIDENQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGL 466

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  E 
Sbjct: 467  NWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREI 526

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D + 
Sbjct: 527  QTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDKAF 579

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+ P
Sbjct: 580  LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP 639

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S++
Sbjct: 640  EKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL 698

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVEFL 1062
            Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E L
Sbjct: 699  QKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEAL 757

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+DGS
Sbjct: 758  QHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLDGS 814

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA  R
Sbjct: 815  IKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR 874

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS----- 1226
            AHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS     
Sbjct: 875  AHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSS 934

Query: 1227 ----QKEVEDILRWGTEELF 1242
                ++E+  IL++G EELF
Sbjct: 935  TPFNKEELSAILKFGAEELF 954


>gi|47215569|emb|CAG10740.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3070

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 278/699 (39%), Positives = 387/699 (55%), Gaps = 64/699 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK-----RKLENYKAKYGTT--VINICDERWKQPQ 665
            EF VK+   S +H  W   + LK L K     +K++ ++ K      +    DE    P 
Sbjct: 130  EFYVKYRNFSYLHCKW---ATLKELEKDPRIHQKIKRFRTKQAQMKHLFTEPDEDLFNPD 186

Query: 666  -----RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQF 715
                 RV+ +  + D           VKW  L Y+E TWE  ++   EK     ++    
Sbjct: 187  YTEVDRVLDVAVTTDTETGEEVTHYLVKWCSLSYEEATWELQEDLDPEKIREFEEV---- 242

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSK 775
              Q L  D    + P  +      +   L    +   G  L  +QLE +NWL   W+  K
Sbjct: 243  --QKLPADLRHVDRPPSE------KWQKLDFSRDYRNGNELREYQLEGMNWLLFNWYNRK 294

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ +  F+  ++     + P L++ PLST+ NW  EF  W  ++NV+ 
Sbjct: 295  NCILADEMGLGKTIQSITFLYEIF-NMGIRGPFLIIAPLSTITNWEREFRTWT-HMNVIV 352

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I QYE    D    N   S  KF+ L+TT+EMI+AD   LR + W  +V+
Sbjct: 353  YHGSQISRQMILQYEMFYRDQQG-NTIPSVLKFHGLITTFEMIMADCPELRKLHWRCVVI 411

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P  FPS S+F E
Sbjct: 412  DEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPLQFPSESTFLE 471

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
            +F DL T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 472  EFGDLKTDEQVKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRAILEK 531

Query: 1016 NYQILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGT-------------EPDSGSV 1059
            N+  L    KG  Q +M N++   M+LRK CNHPYLI G+              PD  + 
Sbjct: 532  NFSFL---SKGANQHNMPNLINTMMELRKCCNHPYLITGSAEEKILESFRKSYSPD--AA 586

Query: 1060 EFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
            +F  +  I+A+ KL L+  +L  L   GH+VL+FSQM + LDILEDYL       +YER+
Sbjct: 587  DFQLQAMIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDYLIQRR--YSYERI 644

Query: 1120 DGSVSVGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DG V    RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA
Sbjct: 645  DGRVRGNQRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQA 704

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILR 1235
              R HRIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +
Sbjct: 705  QARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSK 764

Query: 1236 WGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
               E+L     G  G  M E +   +    D++Q  ++R
Sbjct: 765  LEVEDLLKK--GAYGALMDEEDEGSKFCEEDIDQILQRR 801


>gi|167517477|ref|XP_001743079.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778178|gb|EDQ91793.1| predicted protein [Monosiga brevicollis MX1]
          Length = 751

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 265/683 (38%), Positives = 389/683 (56%), Gaps = 73/683 (10%)

Query: 614  FLVKWVGKSNIHNSWIPES---QLKVLAKRKLENYKAKYG------TTVINICDE----- 659
            + VKW+G S++ N W  E    QL +   RKL+NY  +        + + N   E     
Sbjct: 6    YCVKWIGWSHLENFWNTEEELRQLDIAGIRKLDNYIKQMHDINRRLSVMDNAMQEDYNIK 65

Query: 660  ---------RWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTD 710
                     R+K  +RV+  +  + GT E F KW  L YD+CTWE          S +  
Sbjct: 66   RDEDLQIKARYKVVERVVDSKQGEQGT-EYFCKWENLGYDQCTWE---------LSSVVS 115

Query: 711  LFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALF--PHQLEALNWLR 768
            +  Q E +   +  +   LP G+   ++ +   +TEQP+ L+G +L    +Q++ +NWL 
Sbjct: 116  VLYQQEIEDFIRRRNSQTLPNGRRPVRE-KFRRITEQPDWLRGTSLHLRDYQVDGVNWLA 174

Query: 769  KCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWA 828
            + WH+  +VILADEMGLGKT+ +  +++ L+       P LV+VPLSTM  W+ E   WA
Sbjct: 175  QAWHRETSVILADEMGLGKTIQSSTYLAYLFHSQLQYGPFLVVVPLSTMHAWVKELRRWA 234

Query: 829  PNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGV 888
            P + VV YHG    R   R  E+          +    +FNVLLTT+E +++D   L   
Sbjct: 235  PQMEVVAYHGNRHNREQARVLEF---------DRKEGLQFNVLLTTFETVVSDVDVLSKY 285

Query: 889  PWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 948
             W  L+VDE HRLKN  S L   L      HR+L+TGTPLQN++ E++ LL+F+ P +FP
Sbjct: 286  RWTSLLVDEAHRLKNEESALHVSLKQLQHDHRILITGTPLQNSMKELWALLSFIMPQAFP 345

Query: 949  ----SLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
                SL    ++ + L    +++ L   + P++LRR+KKD  +++P K ER++ V+LSS 
Sbjct: 346  TWEVSLQDDLKREHSLGDHTRLKRLHDDLKPYLLRRVKKDVEKSLPAKVERILRVDLSSR 405

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHE 1064
            Q +YY+ +LT+NY  LR+I K  +  ++LNIVM+L+K CNH  LI     + G  + L  
Sbjct: 406  QQQYYKTILTRNYTELRDIKKSKSS-NLLNIVMELKKCCNHTNLIDDGLDNQGGPDPLTR 464

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            + ++ S KL LL  +L  L + GHRVLIFSQM  +LD+L  YL +      Y+R+DG+  
Sbjct: 465  L-LRGSGKLILLDKLLTRLKESGHRVLIFSQMVVMLDVLAYYLALR--QYQYQRLDGNTK 521

Query: 1125 VGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               R+ AI  FN + S  F FLLSTR+ GLG+NLATADTVIIYDSD+NP  D+QA  RAH
Sbjct: 522  HEQRKRAINHFNAEGSTDFAFLLSTRAGGLGVNLATADTVIIYDSDWNPQNDLQAQARAH 581

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK-------------------S 1224
            RIGQ+K++ +YRLV +++VEE ILQ AK+K++LD L + +                   +
Sbjct: 582  RIGQTKQVNIYRLVSKSTVEEDILQRAKQKMVLDHLVIQRMDTTGSSLLPSQSAKSNRPT 641

Query: 1225 GSQKEVEDILRWGTEELFNDSPG 1247
             S  E++ I+++G  ELF    G
Sbjct: 642  YSANELDAIMKFGAAELFKTGAG 664


>gi|327276401|ref|XP_003222958.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like isoform 1
            [Anolis carolinensis]
          Length = 2892

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 268/670 (40%), Positives = 375/670 (55%), Gaps = 68/670 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  + 
Sbjct: 711  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEELFNPDYIE 770

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
                  +S    KD         VKW  LPY++ TWE    +D+  +E++  L       
Sbjct: 771  VDRVLEVSFCEDKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQL------- 823

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKS 774
              Q  + D+   E P               EQ  + K G  L  +QLE LNWL   W+  
Sbjct: 824  --QAKRPDSRRLERPPPNS-------WKKIEQSRDYKNGNQLREYQLEGLNWLLFNWYNR 874

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
            +N ILADEMGLGKT+ +  F+  +      K P L++ PLST+ NW  EF  W  +LNVV
Sbjct: 875  QNCILADEMGLGKTIQSITFLFEILLT-GIKGPFLIIAPLSTIANWEREFRTWT-DLNVV 932

Query: 835  EYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
             YHG   +R +I+QYE +  D      +  +YKF  ++TT+EMIL     L  + W  ++
Sbjct: 933  VYHGSMISRQMIQQYEMYFRDSQGRIIR-GTYKFQAIITTFEMILGGCPELNAIEWRCII 991

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            +DE HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FP+ S+F 
Sbjct: 992  IDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFM 1051

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
            ++F DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L 
Sbjct: 1052 QEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKQETIIEVELTNIQKKYYRAILE 1111

Query: 1015 KNYQILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEF 1061
            KN+  L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F
Sbjct: 1112 KNFAFL---SKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNPSAPDF 1168

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
              +  I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG
Sbjct: 1169 HLQAMIQSAGKLVLIDKLLPKMKSGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDG 1226

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  
Sbjct: 1227 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1286

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSG-----SQK 1228
            R HRIGQ+K + VYRL+ R S E  +   A  KL LD+  +       N  G     S+K
Sbjct: 1287 RCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSVGGIQQLSKK 1346

Query: 1229 EVEDILRWGT 1238
            E+ED+LR G 
Sbjct: 1347 EIEDLLRRGA 1356


>gi|327276403|ref|XP_003222959.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like isoform 2
            [Anolis carolinensis]
          Length = 2876

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 268/670 (40%), Positives = 375/670 (55%), Gaps = 68/670 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  + 
Sbjct: 711  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEELFNPDYIE 770

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
                  +S    KD         VKW  LPY++ TWE    +D+  +E++  L       
Sbjct: 771  VDRVLEVSFCEDKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQL------- 823

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKS 774
              Q  + D+   E P               EQ  + K G  L  +QLE LNWL   W+  
Sbjct: 824  --QAKRPDSRRLERPPPNS-------WKKIEQSRDYKNGNQLREYQLEGLNWLLFNWYNR 874

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
            +N ILADEMGLGKT+ +  F+  +      K P L++ PLST+ NW  EF  W  +LNVV
Sbjct: 875  QNCILADEMGLGKTIQSITFLFEILLT-GIKGPFLIIAPLSTIANWEREFRTWT-DLNVV 932

Query: 835  EYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
             YHG   +R +I+QYE +  D      +  +YKF  ++TT+EMIL     L  + W  ++
Sbjct: 933  VYHGSMISRQMIQQYEMYFRDSQGRIIR-GTYKFQAIITTFEMILGGCPELNAIEWRCII 991

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            +DE HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FP+ S+F 
Sbjct: 992  IDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFM 1051

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
            ++F DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L 
Sbjct: 1052 QEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKQETIIEVELTNIQKKYYRAILE 1111

Query: 1015 KNYQILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEF 1061
            KN+  L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F
Sbjct: 1112 KNFAFL---SKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNPSAPDF 1168

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
              +  I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG
Sbjct: 1169 HLQAMIQSAGKLVLIDKLLPKMKSGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDG 1226

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  
Sbjct: 1227 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1286

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSG-----SQK 1228
            R HRIGQ+K + VYRL+ R S E  +   A  KL LD+  +       N  G     S+K
Sbjct: 1287 RCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSVGGIQQLSKK 1346

Query: 1229 EVEDILRWGT 1238
            E+ED+LR G 
Sbjct: 1347 EIEDLLRRGA 1356


>gi|392574038|gb|EIW67175.1| hypothetical protein TREMEDRAFT_69728 [Tremella mesenterica DSM 1558]
          Length = 1260

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 274/696 (39%), Positives = 385/696 (55%), Gaps = 79/696 (11%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKAKYGTTVINI----CDERWKQP---- 664
            F VKW G S+IHN+    S LK     +K+ENY  K             D +WK      
Sbjct: 57   FHVKWKGYSHIHNTDEVYSFLKGFKGFKKVENYITKIWMIEQQFLNPSIDAQWKPSREEL 116

Query: 665  -------QRVISLRSS--------------KDGTREA--FVKWTGLPYDECTWEKLDEPA 701
                   +R+  L++S              +DG R +  F KWT L Y E TWE  +E  
Sbjct: 117  EQYDIDRERIKELQASWKIVERVLDEKEDVRDGQRVSLFFCKWTNLQYAESTWETYEEIR 176

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQ 760
                S + +   +  R TL   ++   L        +     +TE P  LK  G L P Q
Sbjct: 177  ETAQSAIDEFHARQSRTTLPARSAAYAL------TNRPAYQKITEDPPYLKDHGELKPFQ 230

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            L  LNWL   W K +N ILADEMGLGKTV + +F+S L+       P LV+VPLST+  W
Sbjct: 231  LTGLNWLAYLWCKGENGILADEMGLGKTVQSVSFLSYLFHTQHQYGPFLVVVPLSTISAW 290

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
             ++F +WAP+LNVV Y G A +R +IRQ E+             + +FNVLLTTYE IL 
Sbjct: 291  QSQFRIWAPDLNVVSYMGSAASREVIRQTEFGP---------LRALRFNVLLTTYEFILK 341

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D + L  + W+ L VDE HRLKN  S+L+  L SFS   R+L+TGTPLQNN+ E+  L++
Sbjct: 342  DRADLGQIKWQALAVDEAHRLKNHESQLYEALKSFSTASRLLITGTPLQNNVKELLALMH 401

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
            FL P  F   + F+    D+    K+++L + +   MLRRLKKD ++ +P K+E+++ VE
Sbjct: 402  FLMPERFQLANDFD--LTDVDQEAKIKDLHEKLGTLMLRRLKKDVVKELPTKSEKILRVE 459

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQ-SMLNIVMQLRKVCNHPYLIPGTEPDSGSV 1059
            LS +Q  YY+     N+ +L    KG  QQ S++NI M+L+K  NHPYL  G E  S S+
Sbjct: 460  LSPMQTHYYK---ITNFAVL---SKGGTQQVSLMNIAMELKKASNHPYLFDGAEDRSKSI 513

Query: 1060 EFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
              +    +  S K+ LL  +L  L  +GHRVLIFSQM +LLDI+ DYL+       ++R+
Sbjct: 514  HEILRGLVMNSGKMVLLDKLLTRLKADGHRVLIFSQMVRLLDIISDYLSAR--GYVFQRL 571

Query: 1120 DGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DG+V    R+ +I  FN   S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QA
Sbjct: 572  DGTVPSDVRKKSIEHFNAPGSPDFAFLLSTRAGGLGINLETADTVIIFDSDYNPQNDLQA 631

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN---------------- 1222
            M RAHRIGQ + + +YR V + ++EE IL+ A++K++L+   +N                
Sbjct: 632  MARAHRIGQQRHVSIYRFVSKGTIEEDILERARRKMILEYAIINQVDTTGGHINGTSTPR 691

Query: 1223 -KSG--SQKEVEDILRWGTEELFNDSPGINGKDMGE 1255
             K G  S++E+  +L++G + ++        K + E
Sbjct: 692  DKPGEFSKEELSAMLKFGAQSIYKTDESAQSKKLDE 727


>gi|451999009|gb|EMD91472.1| hypothetical protein COCHEDRAFT_1194283 [Cochliobolus heterostrophus
            C5]
          Length = 1577

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 274/670 (40%), Positives = 386/670 (57%), Gaps = 81/670 (12%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKA------KYGTTVINICDERWKQP 664
            +E+L+KW  K++ H++W            RKL+NY         Y  +  N   E ++Q 
Sbjct: 295  FEYLIKWQDKAHYHSTWEDYKTASAYKGIRKLDNYYKGPVQNDMYYHSRKNEDPEEFEQH 354

Query: 665  -----------------QRVISLRSSKDGTREAFVKWTGLPYDECTWE------KLDEPA 701
                             +RVI  R  +D T E FVKW GL Y+ CTWE      +L +  
Sbjct: 355  MVAREAERESQLDFHIVERVIDTRDGEDET-EYFVKWKGLTYEFCTWEPASLVSRLSQTE 413

Query: 702  LEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQS------EIVALTEQPEELKGGA 755
            +++Y              L + A+     R   D ++S      + V +  QP+ +K G 
Sbjct: 414  IDRY--------------LDRSAN-----RPTSDLRESNPNTRRKFVKMDTQPDYIKFGQ 454

Query: 756  LFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLS 815
            L   QL+ +N+L   W +  NVILADEMGLGKTV   +FI+ L  + +   P + +VPLS
Sbjct: 455  LRSFQLQGVNFLAHNWCRGTNVILADEMGLGKTVQTVSFINWLRHDRRQDGPMICVVPLS 514

Query: 816  TMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTY 875
            TMP W   F  W P++N V Y G  +AR II++ E      DN  KK    KFNVLLTTY
Sbjct: 515  TMPAWADTFNNWTPDVNYVIYTGREEARNIIKEKELLV---DNNPKKV---KFNVLLTTY 568

Query: 876  EMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEM 935
            E +LAD   L+ + W+ L VDE HRLKN  S+L+  L +F+   R+L+TGTP+QN +GE+
Sbjct: 569  EYVLADWQFLQSIKWQFLAVDEAHRLKNRESQLYERLTAFNAPCRLLITGTPIQNTLGEL 628

Query: 936  YNLLNFLQPASFPSLSSFEEKFNDLTT---TQKVEELKKLVAPHMLRRLKKDAMQNIPPK 992
              L++FL P       S +E   DL++   +QK+ EL   + P+M+RR K+    ++PPK
Sbjct: 629  AALMDFLMPGKI----SVDEHV-DLSSEDASQKLAELSSAIQPYMIRRTKEKVENDLPPK 683

Query: 993  TERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGT 1052
            +E+++ VELS IQ EYY+ +LT+NY+ L   G G  +QS+LNIVM+L+K  NH  L P  
Sbjct: 684  SEKILRVELSDIQLEYYKNILTRNYEALNEGGVG-HKQSLLNIVMELKKASNHALLFPNA 742

Query: 1053 EPD---SG-SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
            E     SG S E   +  I +S K+ LL  +L  L  +GHRVLIFSQM  +LDIL DYL 
Sbjct: 743  ESKLVKSGCSKEETLKALITSSGKMMLLDRLLGKLKADGHRVLIFSQMVHMLDILTDYLK 802

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYD 1167
            +      ++R+DG+V   +R+ AI  FN   S  + FLLSTR+ GLGINL TADTV+I+D
Sbjct: 803  LRN--YAFQRLDGTVPAAERKIAIDHFNAPGSEDYCFLLSTRAGGLGINLMTADTVVIFD 860

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS- 1226
            SD+NP AD+QAM RAHRIGQ K + VYRLV + ++EE IL+ A+ K ML+ + + +  + 
Sbjct: 861  SDWNPQADLQAMARAHRIGQQKPVSVYRLVSKDTIEEEILERARNKRMLEFITIQRGVTD 920

Query: 1227 --QKEVEDIL 1234
              QKE+ D +
Sbjct: 921  RQQKELNDKM 930


>gi|344235901|gb|EGV92004.1| Chromodomain-helicase-DNA-binding protein 9 [Cricetulus griseus]
          Length = 2271

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 269/667 (40%), Positives = 376/667 (56%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +       + D  E    P  V 
Sbjct: 85   EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVE 144

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 145  VDRILEVSFCEDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 198

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
            + + D    + P        S I    +Q  E K G  L  +QLE LNWL   W+  +N 
Sbjct: 199  SSRPDTRHLDRP-------PSNIWKKIDQSREYKNGNQLREYQLEGLNWLLFNWYNRRNC 251

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 252  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 309

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 310  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 368

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 369  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 428

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 429  GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 488

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 489  SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDFHLQ 545

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 546  AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 603

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 604  GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 663

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+ +  + SG           S+KE+E
Sbjct: 664  RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDGTVSGIQQLSKKEIE 723

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 724  DLLRRGA 730


>gi|326500828|dbj|BAJ95080.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1731

 Score =  448 bits (1153), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 277/695 (39%), Positives = 405/695 (58%), Gaps = 91/695 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENY------KAKYGTTV----INICD--- 658
            EF +KW G+S +H  W   S+L+ V   +K+ NY      + +Y  ++    + + D   
Sbjct: 436  EFYIKWKGQSYLHCQWKTLSELRSVSGFKKVLNYMKRVSEEQRYKRSLSREEVEVHDVGK 495

Query: 659  -------ERWKQPQRVISLRSSK-DG---TREAFVKWTGLPYDECTWEK-----LDEPAL 702
                   +++ Q +RV + R++K DG     E  VKW GLPY E TWEK       + A+
Sbjct: 496  EMELDLIKQYSQVERVFADRATKVDGDVVVPEYLVKWQGLPYAESTWEKDTEIEFAQEAI 555

Query: 703  EKY------SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGAL 756
            ++Y      + +    V F+R+  K                 + +  L +QPE LKGG L
Sbjct: 556  DEYRAREVATAILGKTVDFQRKKSK-----------------ASLRRLDDQPEWLKGGKL 598

Query: 757  FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLST 816
              +QLE LN+L   W    NVILADEMGLGKT+ + + +  L+   +   P LV+VPLST
Sbjct: 599  RDYQLEGLNFLVNGWRNDTNVILADEMGLGKTIQSVSMLGFLHNAQEINGPFLVVVPLST 658

Query: 817  MPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSY-KFNVLLTTY 875
            + NW  EF  W P++NVV Y G   +R + +Q+E+        NKK   + KF+ L+TTY
Sbjct: 659  LSNWAKEFRKWLPDMNVVIYVGNRASREMCQQHEFFT------NKKGGRHVKFHTLITTY 712

Query: 876  EMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEM 935
            E+IL D + L  + W  L+VDE HRLKNS + L+  L  FS ++++L+TGTPLQN++ E+
Sbjct: 713  EVILKDKAVLSKIKWSYLMVDEAHRLKNSEASLYIALLEFSTKNKLLITGTPLQNSVEEL 772

Query: 936  YNLLNFLQPASFPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKT 993
            + LL+FL P  F S  +F E++ +L++  + E   L   + PH+LRR+ KD  +++PPK 
Sbjct: 773  WALLHFLDPVKFNSKDTFVERYKNLSSFNETELANLHMELRPHILRRVIKDVEKSLPPKI 832

Query: 994  ERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHPYLIPG 1051
            ER++ +E+S +Q +YY+ +L +N+Q   N+ KGV   Q S+LN+V++L+K CNHP+L   
Sbjct: 833  ERILRIEMSPLQKQYYKWILERNFQ---NLNKGVRGNQVSLLNVVVELKKCCNHPFLFES 889

Query: 1052 TEPDSGSVEFLHEMRIK----ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
             +   G        +++    +S KL LL  +L  L +  HRVLIFSQM ++LDIL +YL
Sbjct: 890  ADHGYGGDSIGDRNKVERIVMSSGKLVLLDKLLLRLRETNHRVLIFSQMVRMLDILSEYL 949

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
            ++      ++R+DGS     R  A+  FN   S  F FLLSTR+ GLGINLATADTVII+
Sbjct: 950  SLR--GFQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIF 1007

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN---- 1222
            DSD+NP  D+QAM+RAHRIGQ   + +YR V   SVEE IL+ AKKK++LD L +     
Sbjct: 1008 DSDWNPQNDLQAMSRAHRIGQQDTVNIYRFVTCKSVEEDILERAKKKMVLDHLVIQKLNA 1067

Query: 1223 ----------KSGS---QKEVEDILRWGTEELFND 1244
                      K GS   + E+  ILR+G EELF +
Sbjct: 1068 EGRLEKKETKKGGSMFDKNELSAILRFGAEELFKE 1102


>gi|345794276|ref|XP_535304.3| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
            [Canis lupus familiaris]
          Length = 2886

 Score =  448 bits (1153), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/670 (40%), Positives = 377/670 (56%), Gaps = 68/670 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +       + D  E    P  V 
Sbjct: 717  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVE 776

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
                  +S    KD         VKW  LPY++ TWE    +D   +E++ HL       
Sbjct: 777  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEHL------- 829

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKS 774
              Q  + D    + P        + I    +Q  + K G  L  +QLE LNWL   W+  
Sbjct: 830  --QASRPDTRHLDRP-------PANIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNR 880

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
            +N ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV
Sbjct: 881  RNCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVV 938

Query: 835  EYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
             YHG   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  ++
Sbjct: 939  VYHGSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVI 997

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            +DE HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F 
Sbjct: 998  IDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFM 1057

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
            ++F DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L 
Sbjct: 1058 QEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILE 1117

Query: 1015 KNYQILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEF 1061
            KN+  L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F
Sbjct: 1118 KNFSFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDF 1174

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
              +  I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG
Sbjct: 1175 HLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDG 1232

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  
Sbjct: 1233 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1292

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQK 1228
            R HRIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+K
Sbjct: 1293 RCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKK 1352

Query: 1229 EVEDILRWGT 1238
            E+ED+LR G 
Sbjct: 1353 EIEDLLRRGA 1362


>gi|395839421|ref|XP_003792588.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Otolemur
            garnettii]
          Length = 2898

 Score =  448 bits (1153), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 269/667 (40%), Positives = 375/667 (56%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + DA   + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDARHLDRP-------PSSIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+ +  + SG           S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSTVGGIQQLSKKEIE 1353

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1354 DLLRRGA 1360


>gi|300796537|ref|NP_001178977.1| chromodomain-helicase-DNA-binding protein 1 [Bos taurus]
          Length = 1810

 Score =  448 bits (1153), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 279/695 (40%), Positives = 396/695 (56%), Gaps = 86/695 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 316  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 375

Query: 653  VINICDERWKQPQ---RVI---------------SLRSSKDGTREAFVKWTGLPYDECTW 694
               + D+  KQ Q   R+I               S + S  G  + + KW GLPY EC+W
Sbjct: 376  QQELTDDLHKQYQIVERIIDKIQCKIYLVYLTAHSNQKSAAGYPDYYCKWQGLPYSECSW 435

Query: 695  EKLDEPAL--EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK 752
            E   + AL  +K+    D +  F R   K    +D     K   Q+   VAL +QP  + 
Sbjct: 436  E---DGALISKKFQACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIG 486

Query: 753  GGA---LFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
            G     L  +QL  LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L
Sbjct: 487  GHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFL 546

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN
Sbjct: 547  LVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFN 599

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
            +LLTTYE++L D + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 600  ILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 659

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F S   FEE+            L K + P +LRR+KKD  +++
Sbjct: 660  NSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSL 718

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ +E+S++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI
Sbjct: 719  PAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLI 777

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 778  KPPDNNEFYNKQEALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYL 836

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
                 P  ++R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 837  KYRQFP--FQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIF 894

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK--- 1223
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +   
Sbjct: 895  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDT 954

Query: 1224 -------SGS---------QKEVEDILRWGTEELF 1242
                   +GS         ++E+  IL++G EELF
Sbjct: 955  TGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELF 989


>gi|296485027|tpg|DAA27142.1| TPA: chromodomain helicase DNA binding protein 1-like [Bos taurus]
          Length = 1810

 Score =  448 bits (1152), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 279/695 (40%), Positives = 396/695 (56%), Gaps = 86/695 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 316  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 375

Query: 653  VINICDERWKQPQ---RVI---------------SLRSSKDGTREAFVKWTGLPYDECTW 694
               + D+  KQ Q   R+I               S + S  G  + + KW GLPY EC+W
Sbjct: 376  QQELTDDLHKQYQIVERIIDKIQCKIYLVYLTAHSNQKSAAGYPDYYCKWQGLPYSECSW 435

Query: 695  EKLDEPAL--EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK 752
            E   + AL  +K+    D +  F R   K    +D     K   Q+   VAL +QP  + 
Sbjct: 436  E---DGALISKKFQACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIG 486

Query: 753  GGA---LFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
            G     L  +QL  LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L
Sbjct: 487  GHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFL 546

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN
Sbjct: 547  LVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFN 599

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
            +LLTTYE++L D + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 600  ILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 659

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F S   FEE+            L K + P +LRR+KKD  +++
Sbjct: 660  NSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSL 718

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ +E+S++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI
Sbjct: 719  PAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLI 777

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 778  KPPDNNEFYNKQEALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYL 836

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
                 P  ++R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 837  KYRQFP--FQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIF 894

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK--- 1223
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +   
Sbjct: 895  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDT 954

Query: 1224 -------SGS---------QKEVEDILRWGTEELF 1242
                   +GS         ++E+  IL++G EELF
Sbjct: 955  TGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELF 989


>gi|194386618|dbj|BAG61119.1| unnamed protein product [Homo sapiens]
          Length = 1108

 Score =  448 bits (1152), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 376/667 (56%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICDER-------WKQ 663
            EF VK+   S +H  W  E QL      ++K++ +K +         D         + +
Sbjct: 241  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 300

Query: 664  PQRVISLRSSKD-GTREA----FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
              RV+ +   +D  T E      VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 301  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 354

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 355  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 407

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 408  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 465

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 466  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 524

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 525  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 584

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 585  GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 644

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 645  SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 701

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 702  AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLI--HKRYLYERIDGRVR 759

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 760  GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 819

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+ +  + SG           S+KE+E
Sbjct: 820  RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 879

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 880  DLLRRGA 886


>gi|350580951|ref|XP_003123851.3| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Sus scrofa]
          Length = 1706

 Score =  448 bits (1152), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 276/682 (40%), Positives = 394/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 311  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 370

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 371  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 427

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 428  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 481

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 482  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 541

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 542  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 594

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 595  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 654

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 655  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 713

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 714  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 772

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 773  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 829

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 830  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 889

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIG   ++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 890  ARAHRIGYLSQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 949

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 950  SSTPFNKEELSAILKFGAEELF 971


>gi|303324465|ref|XP_003072220.1| SNF2 family N-terminal domain containing protein [Coccidioides
            posadasii C735 delta SOWgp]
 gi|240111930|gb|EER30075.1| SNF2 family N-terminal domain containing protein [Coccidioides
            posadasii C735 delta SOWgp]
 gi|320037260|gb|EFW19198.1| chromodomain helicase hrp1 [Coccidioides posadasii str. Silveira]
          Length = 1520

 Score =  448 bits (1152), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 259/655 (39%), Positives = 377/655 (57%), Gaps = 56/655 (8%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVINIC---------DERW 661
            +EF +KW GKS+ H +W   ES +   + R+L+NY  K     ++            E+W
Sbjct: 306  FEFYIKWQGKSHYHATWETDESLVNCRSNRRLDNYVRKLLIQELSFMKDPDMIPEEKEKW 365

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                          K  +RVI  R    G  E +VKW  L Y+ CTWE  +  +      
Sbjct: 366  NLDRERDIEAIEDFKLVERVIGSRKVA-GVTEYYVKWKRLFYESCTWEGAELVSSIAQQE 424

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
            +     +  R  +      ++  R       S    +   P+ +  G L   Q++ +N++
Sbjct: 425  IDRYLDRCSRPPVSSRLESNQSTR-------SAFEPIHGTPDFVCNGQLKDFQVKGVNFM 477

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W + +NV+LADEMGLGKTV    FI+ L      + P +V+VPLSTMP+W   F  W
Sbjct: 478  AYNWVRGRNVVLADEMGLGKTVQTVTFINWLRHVRNQQGPFIVVVPLSTMPSWAETFDYW 537

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P+LN V Y G   +R II++YE       N+ +     KF+VLLTTYE +L D+S L  
Sbjct: 538  TPDLNYVVYSGNEASRNIIKEYELLVD--GNIKRP----KFHVLLTTYEYVLVDASFLSQ 591

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ L VDE HRLKN  S+L++ L  F    R+L+TGTP+QNN+GE+  L++FL P   
Sbjct: 592  IKWQFLAVDEAHRLKNRDSQLYAKLVEFKSPSRLLITGTPVQNNLGELSALMDFLNPG-- 649

Query: 948  PSLSSFEEKFNDLTT---TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              L   +E   DL++   + K+ EL K + P MLRR K     ++PPK+E+++ VELS +
Sbjct: 650  --LIEIDENM-DLSSEAASVKLAELTKAIQPFMLRRTKSKVESDLPPKSEKIIRVELSDV 706

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFL 1062
            Q EYY+ +LTKNY  L    KG  +QS+LNI+M+L+K  NHP++    E     GS    
Sbjct: 707  QLEYYKNILTKNYAALNQGAKG-QKQSLLNIMMELKKASNHPFMFANAEDRILQGSTRRE 765

Query: 1063 HEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIE-FGPKTYERV 1119
              +R  I +S K+ LL  +L  L  +GHRVLIFSQM ++LDIL DY++   F    Y+R+
Sbjct: 766  DALRALITSSGKMMLLDQLLAKLKNDGHRVLIFSQMVRMLDILADYMDARGFA---YQRL 822

Query: 1120 DGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DG+++ G R+ +I  FN  D + F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QA
Sbjct: 823  DGTIAAGPRRLSIEHFNAPDSTDFAFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQA 882

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            M RAHRIGQ+K + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  ++
Sbjct: 883  MARAHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEATEL 937


>gi|345325257|ref|XP_001509337.2| PREDICTED: chromodomain-helicase-DNA-binding protein 6
            [Ornithorhynchus anatinus]
          Length = 2443

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 269/695 (38%), Positives = 385/695 (55%), Gaps = 60/695 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ---- 665
            F VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P     
Sbjct: 318  FYVKYRNFSYLHCKWATMEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEV 377

Query: 666  -RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQT 719
             R++ +  +KD           VKW  LPY+E TWE  ++    K      L +  E + 
Sbjct: 378  DRILEVAHTKDSDTGEEVTHYLVKWCSLPYEESTWELEEDVDPVKVKEFESLQILPEIKH 437

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
            +++ ASE                 L +  E      L  +QLE +NWL   W+  KN IL
Sbjct: 438  VERPASES-------------WQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL 484

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+S ++       P L++ PLST+ NW  EF  W   +N + YHG 
Sbjct: 485  ADEMGLGKTIQSITFLSEIFL-MGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGS 542

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R +I+QYE    D    N  +  +KF+V++TT+EMILAD   L+ + W  +++DE H
Sbjct: 543  QISRQMIQQYEMVYRDAQG-NPLSGIFKFHVVITTFEMILADCPELKKIQWSCVIIDEAH 601

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P  FPS ++F E+F D
Sbjct: 602  RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPLQFPSETAFLEEFGD 661

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  
Sbjct: 662  LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 721

Query: 1020 LRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTE------------PDSGSVEFLHE 1064
            L    KG  Q +M N++   M+LRK CNHPYLI G E            PD  +++F  +
Sbjct: 722  L---AKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPD--ALDFQLQ 776

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDY-LNIEFGPKTYERVDGSV 1123
              I+A+ KL L+  +L  L   GH+VLIFSQM + LD    +     +   TYER+DG V
Sbjct: 777  AMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDXXXSFGFPTRY---TYERIDGRV 833

Query: 1124 SVGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
                RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R 
Sbjct: 834  RGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC 893

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTE 1239
            HRIGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E
Sbjct: 894  HRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVE 953

Query: 1240 ELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
            +L     G  G  M E +   +    D++Q  ++R
Sbjct: 954  DLLRK--GAYGALMDEEDEGSKFCEEDIDQILQRR 986


>gi|449472625|ref|XP_002193588.2| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Taeniopygia
            guttata]
          Length = 2889

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/669 (40%), Positives = 376/669 (56%), Gaps = 68/669 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 712  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKVRKAQRAHFFADMEEEPFNPDYVE 771

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
                  +SL   KD         VKW  LPY++ TWE    +D+  +E++  L       
Sbjct: 772  VDRVLEVSLCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQL------- 824

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKS 774
              Q  + D+   + P               EQ  E K G  L  +QLE LNWL   W+  
Sbjct: 825  --QASRPDSRRLDRPPPNS-------WKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNR 875

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
            +N ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  +LNVV
Sbjct: 876  RNCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTITNWEREFRTWT-DLNVV 933

Query: 835  EYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
             YHG   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  ++
Sbjct: 934  VYHGSMISRQMIQQYEMYFRDSQGRIVR-GTYRFQAIITTFEMILGGCPELNAIEWRCVI 992

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            +DE HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FP+ S+F 
Sbjct: 993  IDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFM 1052

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
            ++F DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L 
Sbjct: 1053 QEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILE 1112

Query: 1015 KNYQILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEF 1061
            KN+  L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F
Sbjct: 1113 KNFAFL---SKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNPSAPDF 1169

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
              +  I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG
Sbjct: 1170 HLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDG 1227

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  
Sbjct: 1228 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1287

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSG-----SQK 1228
            R HRIGQ+K + VYRL+ R S E  +   A  KL LD+  +       N  G     S+K
Sbjct: 1288 RCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKK 1347

Query: 1229 EVEDILRWG 1237
            E+ED+LR G
Sbjct: 1348 EIEDLLRRG 1356


>gi|354491203|ref|XP_003507745.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like
            [Cricetulus griseus]
          Length = 2579

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 266/666 (39%), Positives = 375/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSVDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF----------LH-E 1064
            N+  L          ++LN +M+LRK CNHPYLI G E +   +EF           H +
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILMEFREACHIIPQDFHLQ 1126

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              ++++ KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|345570508|gb|EGX53329.1| hypothetical protein AOL_s00006g195 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1621

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/643 (40%), Positives = 377/643 (58%), Gaps = 56/643 (8%)

Query: 607  GKAVSYEFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAKYGTTVINICD----- 658
            G     EFL+KW  +++IH +W   S+L   K +  RKL NY AK    +    D     
Sbjct: 310  GSKEHLEFLIKWTEQAHIHATWEQTSELTHKKYI--RKLTNYMAKLKKEIAKRSDPETTR 367

Query: 659  --------ERWKQPQ---------RVISLRSSKDG-TREAFVKWTGLPYDECTWEKLDEP 700
                    ER +Q +         RV++ R  +D    E  VKW  L Y+ CTWE   E 
Sbjct: 368  EDLERLTLERERQVEAALEARGVERVVASRGGQDDEPLEYLVKWRSLTYEHCTWET--ES 425

Query: 701  ALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQ 760
             L   +       QF ++T    ++ +       D ++ ++   ++QP+ ++ G L   Q
Sbjct: 426  FLGPVAPTE--ISQFRKRTR---SARNYAVTPVKDRKKYKL--WSKQPDYIQYGELRDFQ 478

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
            ++ +NWLR  W   +N ILADEMGLGKTV   AF+S L  E +   P LV+VPLST+P W
Sbjct: 479  MKGVNWLRYNWSVHRNSILADEMGLGKTVQTVAFLSWLKNEMEIDGPFLVVVPLSTVPAW 538

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILA 880
               F  WAP+LN + Y+G  KAR II+ YE      D   KKT   KF+V++TTYE +  
Sbjct: 539  CETFVKWAPDLNFIVYNGPNKARGIIQDYEMFQ---DEKRKKT---KFHVMITTYEYVNH 592

Query: 881  DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLN 940
            D+  L+ + W  L VDE HRLKN  S+L+  L  F  + R+L+TGTPLQNN+ E+  LL 
Sbjct: 593  DAQLLQSIRWNYLAVDEAHRLKNVESRLYESLKQFKVEDRLLITGTPLQNNLSELVALLE 652

Query: 941  FLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
            FL P +     + +         Q++++L++ + P++LRR+KKD   ++P KTE+++ VE
Sbjct: 653  FLDPGNINIDRNID--LQSEGAEQEIKKLQETLQPYILRRVKKDVEASLPQKTEKIIRVE 710

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD----- 1055
            LS IQ E+Y+ + T+NY  L    K   + S+LNIVM+L+K+ NHP+L P  E +     
Sbjct: 711  LSDIQTEWYKNIYTRNYSALN--AKSKQKVSLLNIVMELKKISNHPFLFPSAEEEIMKGL 768

Query: 1056 SGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKT 1115
                + L+ M I  S K+ L+   L  +  +GHRVLIFSQM  +LD+L++YL +     +
Sbjct: 769  ETKADRLNAM-IMCSGKMVLMDRFLTKMKADGHRVLIFSQMVNMLDLLQEYLTLRGF--S 825

Query: 1116 YERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHA 1174
            Y+R+DG+VS  +R+ AI R+N   S  F FLLSTR+ GLGINL +ADTVII+DSD+NP A
Sbjct: 826  YQRIDGTVSASNRKTAIDRYNAPGSEDFCFLLSTRAGGLGINLTSADTVIIFDSDWNPQA 885

Query: 1175 DIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD 1217
            D+QAM RAHRIGQ   +++YR V + ++EE +L+ A+ KL+++
Sbjct: 886  DLQAMARAHRIGQKNHVMIYRFVSKDTIEEEVLERARVKLLME 928


>gi|119173796|ref|XP_001239291.1| hypothetical protein CIMG_10313 [Coccidioides immitis RS]
 gi|392869498|gb|EJB11843.1| chromodomain helicase [Coccidioides immitis RS]
          Length = 1520

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 259/655 (39%), Positives = 377/655 (57%), Gaps = 56/655 (8%)

Query: 612  YEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVINIC---------DERW 661
            +EF +KW GKS+ H +W   ES +   + R+L+NY  K     ++            E+W
Sbjct: 306  FEFYIKWQGKSHYHATWETDESLVDCRSNRRLDNYVRKLLIQELSFMKDPDMIPEEKEKW 365

Query: 662  --------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                          K  +RVI  R    G  E +VKW  L Y+ CTWE  +  +      
Sbjct: 366  NLDRERDIEAIEDFKLVERVIGSRKVA-GVTEYYVKWKRLFYESCTWEGAELVSSIAQQE 424

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
            +     +  R  +      ++  R       S    +   P+ +  G L   Q++ +N++
Sbjct: 425  IDRYLDRCSRPPVSSRLESNQSTR-------SAFEPIHGTPDFVCNGQLKDFQVKGVNFM 477

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W + +NV+LADEMGLGKTV    FI+ L      + P +V+VPLSTMP+W   F  W
Sbjct: 478  AYNWVRGRNVVLADEMGLGKTVQTVTFINWLRHVRNQQGPFIVVVPLSTMPSWAETFDYW 537

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
             P+LN V Y G   +R II++YE       N+ +     KF+VLLTTYE +L D+S L  
Sbjct: 538  TPDLNYVVYSGNEASRNIIKEYELLVD--GNIKRP----KFHVLLTTYEYVLVDASFLSQ 591

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ L VDE HRLKN  S+L++ L  F    R+L+TGTP+QNN+GE+  L++FL P   
Sbjct: 592  IKWQFLAVDEAHRLKNRDSQLYAKLVEFKSPSRLLITGTPVQNNLGELSALMDFLNPG-- 649

Query: 948  PSLSSFEEKFNDLTT---TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              L   +E   DL++   + K+ EL K + P MLRR K     ++PPK+E+++ VELS +
Sbjct: 650  --LIEIDENM-DLSSEAASVKLAELTKAIQPFMLRRTKSKVESDLPPKSEKIIRVELSDV 706

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFL 1062
            Q EYY+ +LTKNY  L    KG  +QS+LNI+M+L+K  NHP++    E     GS    
Sbjct: 707  QLEYYKNILTKNYAALNQGAKG-QKQSLLNIMMELKKASNHPFMFANAEDRILQGSTRRE 765

Query: 1063 HEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIE-FGPKTYERV 1119
              +R  I +S K+ LL  +L  L  +GHRVLIFSQM ++LDIL DY++   F    Y+R+
Sbjct: 766  DALRALITSSGKMMLLDQLLAKLKNDGHRVLIFSQMVRMLDILADYMDARGFA---YQRL 822

Query: 1120 DGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DG+++ G R+ +I  FN  D + F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QA
Sbjct: 823  DGTIAAGPRRLSIEHFNAPDSTDFAFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQA 882

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            M RAHRIGQ+K + VYRLV + +VEE +++ A+ KL+L+ + + +  + KE  ++
Sbjct: 883  MARAHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEATEL 937


>gi|351704328|gb|EHB07247.1| Chromodomain-helicase-DNA-binding protein 9, partial [Heterocephalus
            glaber]
          Length = 1573

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 269/667 (40%), Positives = 375/667 (56%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +SL   KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRILEVSLCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRHLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHK--RYLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+ +  + SG           S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESTVGGIQQLSKKEIE 1353

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1354 DLLRRGA 1360


>gi|344252331|gb|EGW08435.1| Chromodomain-helicase-DNA-binding protein 8 [Cricetulus griseus]
          Length = 2587

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 266/666 (39%), Positives = 375/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSVDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF----------LH-E 1064
            N+  L          ++LN +M+LRK CNHPYLI G E +   +EF           H +
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILMEFREACHIIPQDFHLQ 1126

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              ++++ KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|330793226|ref|XP_003284686.1| hypothetical protein DICPUDRAFT_53111 [Dictyostelium purpureum]
 gi|325085384|gb|EGC38792.1| hypothetical protein DICPUDRAFT_53111 [Dictyostelium purpureum]
          Length = 2666

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/657 (40%), Positives = 381/657 (57%), Gaps = 74/657 (11%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVIN-----ICDERWKQP---- 664
            FLV +  KS  H  W+PE   K + K K      K    + N     I DE    P    
Sbjct: 514  FLVLYKNKSYRHARWVPE---KSVEKEKDSPTLVKLLKNIKNQPPPPINDESEANPFYYF 570

Query: 665  -------QRVISLRSSKDGTREA--------FVKWTGLPYDECTWEKLDEPALEKYSHLT 709
                    ++++ R  +  ++           VKW  LP+++ TWE  D    E      
Sbjct: 571  APECIQIDKILTKREIRSSSKSNNKKSNTFYLVKWKSLPHEKSTWEPSDSLTSEDDQEAI 630

Query: 710  DLFVQFE---RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALN 765
             +F Q +    Q  K  +   +LP        SE+V       + KG  +L   Q+E   
Sbjct: 631  KVFNQTQAIIEQGKKHVSRPTKLP-----VFNSELVP------KFKGELSLKDFQVEGFL 679

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            WL  CW++ ++ +LADEMGLGKT+   AFI  L  +   K P L++ PLST+ NW  EF 
Sbjct: 680  WLTYCWYQGRSSLLADEMGLGKTIQTIAFIQYLSQKVGIKGPFLIVAPLSTLGNWHKEFL 739

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             W  ++  + Y+G  + R+ I +YE+ A   DN       Y F VLLTTYE I++D S  
Sbjct: 740  KWT-DMKTLVYYGSQETRSFISKYEFKAGK-DN-------YLFEVLLTTYETIMSDHSVF 790

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
              VPW  LV+DEGHR+KN  SK+ S L S   +H V+LTGTPLQN++ E++ +LNFL P 
Sbjct: 791  VRVPWRALVLDEGHRIKNEKSKVLSKLKSIKTEHSVILTGTPLQNDMKELWTMLNFLDPE 850

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
             F + + F  +++DL    +V +L +L+ P++LRR+K++   +IP K E ++ VELSS Q
Sbjct: 851  KFDNCNDFLNEYSDLKEESQVSKLHQLLTPYLLRRMKENVELSIPIKEETVIQVELSSTQ 910

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSML----NIVMQLRKVCNHPYLIPGTEPD------ 1055
              YYRA+L +N + L    +G+  +S L    NI++Q+RKVCNHP+LIPG E        
Sbjct: 911  KTYYRAILERNREFL---ARGIRHKSNLPKLSNIMIQIRKVCNHPFLIPGAEESIVKQEK 967

Query: 1056 -SGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPK 1114
             SG  E L E+ +++S+KL L+  +L+ L  EGH+VLIFSQM + L+ILEDYL  ++   
Sbjct: 968  ISGEDE-LGELLVRSSSKLVLVDKLLQRLKAEGHQVLIFSQMVESLNILEDYL--QYREY 1024

Query: 1115 TYERVDGSVSVGDRQAAITRFNQDK--SRFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
            TYER+DGS+    RQA+I RF QDK  +RFVFLLSTR+ G+GINL TADTVI++DSD+NP
Sbjct: 1025 TYERLDGSIKSEVRQASIDRF-QDKEANRFVFLLSTRAGGVGINLTTADTVILFDSDWNP 1083

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---NKSGS 1226
             +D+QA  R HRIGQ+  + VYRL+ R + EE + + A KKL+LD + +   NK G+
Sbjct: 1084 QSDLQAQARCHRIGQTNNVKVYRLITRNTYEEYLFECATKKLLLDHIVLSTNNKKGA 1140


>gi|344289261|ref|XP_003416363.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 9-like [Loxodonta africana]
          Length = 2887

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/667 (40%), Positives = 373/667 (55%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 718  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFSDMEEEPFNPDYVE 777

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 778  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 831

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 832  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 884

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 885  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 942

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 943  GSLVSRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 1001

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 1002 AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1061

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1062 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1121

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1122 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1178

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1179 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1236

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1237 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1296

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1297 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNGGGIQQLSKKEIE 1356

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1357 DLLRRGA 1363


>gi|397502864|ref|XP_003846159.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 9 [Pan paniscus]
          Length = 2425

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/667 (40%), Positives = 373/667 (55%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 241  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 300

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 301  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 354

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 355  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 407

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 408  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 465

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 466  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 524

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 525  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 584

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 585  GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 644

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 645  SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 701

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 702  AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 759

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 760  GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 819

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 820  RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 879

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 880  DLLRRGA 886


>gi|395505946|ref|XP_003757297.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 4
            [Sarcophilus harrisii]
          Length = 2875

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/670 (39%), Positives = 376/670 (56%), Gaps = 70/670 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 716  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 775

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
                  +S    KD         VKW  LPY++ TWE    +D+  +E++  L       
Sbjct: 776  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQL------- 828

Query: 716  ERQTLKKDAS--EDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHK 773
              Q  + D+   +  LP      +QS         E   G  L  +QLE LNWL   W+ 
Sbjct: 829  --QASRPDSRHLDRPLPNTWKKIEQSR--------EYKNGNQLREYQLEGLNWLLFNWYN 878

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
             +N ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  +LNV
Sbjct: 879  RRNCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTITNWEREFRTWT-DLNV 936

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
            V YHG   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +
Sbjct: 937  VVYHGSLVSRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCV 995

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
            ++DE HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS ++F
Sbjct: 996  IIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSETTF 1055

Query: 954  EEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAML 1013
             ++F DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L
Sbjct: 1056 MQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAIL 1115

Query: 1014 TKNYQILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVE 1060
             KN+  L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +
Sbjct: 1116 EKNFAFL---SKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETHNPAAPD 1172

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
            F  +  I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+D
Sbjct: 1173 FHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERID 1230

Query: 1121 GSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA 
Sbjct: 1231 GRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQ 1290

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSG-----SQ 1227
             R HRIGQ+K + VYRL+ R S E  +   A  KL LD+  +       N  G     S+
Sbjct: 1291 ARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSK 1350

Query: 1228 KEVEDILRWG 1237
            KE+ED+LR G
Sbjct: 1351 KEIEDLLRRG 1360


>gi|296815930|ref|XP_002848302.1| chromodomain helicase hrp3 [Arthroderma otae CBS 113480]
 gi|238841327|gb|EEQ30989.1| chromodomain helicase hrp3 [Arthroderma otae CBS 113480]
          Length = 1524

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 256/653 (39%), Positives = 382/653 (58%), Gaps = 55/653 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK----RKLENY-KAKYGTTVINICD--------E 659
            E+  KW G ++ H +W     +  LA     R+L+NY + +    ++ + D        E
Sbjct: 314  EYYTKWQGLAHYHATW---ETVDTLANCRGVRRLDNYIRREIEQEILFMRDPDVIPEERE 370

Query: 660  RW--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKY 705
            +W              KQ +RVI  R   DG  E ++KW  LPYD CTWE   E +L   
Sbjct: 371  KWSLDRERYIEKIDHFKQVERVIGSREV-DGATEYYIKWKRLPYDGCTWE---EGSLISN 426

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALN 765
               + +    +R +    +S  E         +S+   +   P+ ++ G L   Q++ +N
Sbjct: 427  MAQSQIDAYLDRCSHPPISSRTE----SNPATRSKFEPIHGNPDFIQNGQLKEFQIKGVN 482

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            +L   W + +NV+LADEMGLGKTV   AFI+ L    + + P +V+VPLSTMP W   F 
Sbjct: 483  FLAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRQQQGPFIVIVPLSTMPAWSETFD 542

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
            LW P++N + Y G   AR II++YE       NL +     KFNVLLTTYE +L D+S L
Sbjct: 543  LWTPDVNYIVYSGPEPARRIIKEYELLTDG--NLKRP----KFNVLLTTYEYVLQDASFL 596

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
              + W+ + +DE HRLKN  S+L++ L  F    R+L+TGTP+QNN+GE+  L++FL P 
Sbjct: 597  NQIKWQFMAIDEAHRLKNRESQLYTKLLDFKSSCRLLITGTPVQNNLGELSALMDFLNPG 656

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
            +     + +   N    + K+ EL + + P+MLRR K      +PPK+E+++ VELS +Q
Sbjct: 657  AIDIDENMD--LNSEAASAKLAELTQAIQPYMLRRTKSKVESELPPKSEKIIRVELSDVQ 714

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEM 1065
             E Y+ +LTKNY  L + GKG  + S+LNI+M+L+K  NHP++  G E  +G      E 
Sbjct: 715  LELYKNILTKNYDALNHGGKG-PKPSLLNIMMELKKASNHPFMFWGAEDQAGG-STRRED 772

Query: 1066 RIKA----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
            ++KA    S K+ +L  +L  L  +GHRVLIFSQM ++L+IL +Y++       Y+R+DG
Sbjct: 773  QLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYMDARGF--NYQRLDG 830

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            +++ G R+ AI  +N   S  F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QAM 
Sbjct: 831  TIAAGPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMA 890

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            RAHRIGQ+K + VYRLV + +VEE +L+ A+ KL+L+ + + +  +  E  ++
Sbjct: 891  RAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGVTDNEATNL 943


>gi|195435393|ref|XP_002065676.1| GK15574 [Drosophila willistoni]
 gi|194161761|gb|EDW76662.1| GK15574 [Drosophila willistoni]
          Length = 1941

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 270/685 (39%), Positives = 393/685 (57%), Gaps = 75/685 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPES---QLKVLAKRKLENYKAK----------YGTTVINI--C 657
            ++L+KW G S IHN+W  E+   ++K    +KL+N+  K           G   I+   C
Sbjct: 389  QYLIKWKGWSYIHNTWESENTLREMKAKGMKKLDNFIKKEQEQAYWRRCAGPEDIDYFEC 448

Query: 658  DER--------WKQPQRVISLRSSKD-GTREAFVKWTGLPYDECTWEKLDEPALEKYSHL 708
             +         +    R+I+  S  + G+ E   KW  LPY E TWE      L K++  
Sbjct: 449  QQELQHELLKSYNNVDRIIAKGSKPEIGSEEYLCKWQSLPYAESTWEDATL-VLRKWARC 507

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG-ALFPHQLEA 763
             + F   ER+  K   S          C+    + +   +  QP+ L  G  L  +Q++ 
Sbjct: 508  AEQFQ--ERECSKCTPSRH--------CRVLKCRPKFSRIKNQPDFLVSGLVLRDYQMDG 557

Query: 764  LNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            LNWL   W K  +VILADEMGLGKT+    F+ +L+       P L +VPLSTM  W  E
Sbjct: 558  LNWLLHSWCKENSVILADEMGLGKTIQTICFLYALFKIQHLYGPFLCVVPLSTMTAWQRE 617

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
            F LWAP++NVV Y G  K+R +I+QYEW       L       KFN +LTTYE++L D  
Sbjct: 618  FDLWAPDMNVVTYLGDVKSRELIQQYEWQFEGSKRL-------KFNCILTTYEIVLKDKQ 670

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             L  + W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+F+ 
Sbjct: 671  FLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIM 730

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            P  F +  +FE +  +    +    L + + P++LRR+KKD  +++P K E+++ VE++S
Sbjct: 731  PEKFDTWENFELQHGN-AEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTS 789

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLH 1063
            +Q +YY+ +LTKN+  LR  GK  +  + LNIV++L+K CNH  LI  +E +   ++   
Sbjct: 790  LQKQYYKWILTKNFDALRK-GKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDE 848

Query: 1064 EMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
             ++  +K S KL LL  +L  L + GHRVLIFSQM ++LD+L DYL       +++R+DG
Sbjct: 849  ALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHF--SFQRLDG 906

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            S+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA  
Sbjct: 907  SIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQA 966

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-----------NKSGS--- 1226
            RAHRIGQ  ++ +YRLV   SVEE+I++ AK+K++LD L +           +KSGS   
Sbjct: 967  RAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGSGHS 1026

Query: 1227 -------QKEVEDILRWGTEELFND 1244
                   + ++  IL++G EELF D
Sbjct: 1027 TNSNPFNKDDLSAILKFGAEELFKD 1051


>gi|403264247|ref|XP_003924401.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
            [Saimiri boliviensis boliviensis]
          Length = 2581

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|395505940|ref|XP_003757294.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
            [Sarcophilus harrisii]
          Length = 2900

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/670 (39%), Positives = 376/670 (56%), Gaps = 70/670 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 716  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 775

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
                  +S    KD         VKW  LPY++ TWE    +D+  +E++  L       
Sbjct: 776  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQL------- 828

Query: 716  ERQTLKKDAS--EDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHK 773
              Q  + D+   +  LP      +QS         E   G  L  +QLE LNWL   W+ 
Sbjct: 829  --QASRPDSRHLDRPLPNTWKKIEQSR--------EYKNGNQLREYQLEGLNWLLFNWYN 878

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
             +N ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  +LNV
Sbjct: 879  RRNCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTITNWEREFRTWT-DLNV 936

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
            V YHG   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +
Sbjct: 937  VVYHGSLVSRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCV 995

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
            ++DE HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS ++F
Sbjct: 996  IIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSETTF 1055

Query: 954  EEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAML 1013
             ++F DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L
Sbjct: 1056 MQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAIL 1115

Query: 1014 TKNYQILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVE 1060
             KN+  L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +
Sbjct: 1116 EKNFAFL---SKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETHNPAAPD 1172

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
            F  +  I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+D
Sbjct: 1173 FHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERID 1230

Query: 1121 GSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA 
Sbjct: 1231 GRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQ 1290

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSG-----SQ 1227
             R HRIGQ+K + VYRL+ R S E  +   A  KL LD+  +       N  G     S+
Sbjct: 1291 ARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSK 1350

Query: 1228 KEVEDILRWG 1237
            KE+ED+LR G
Sbjct: 1351 KEIEDLLRRG 1360


>gi|338717121|ref|XP_003363589.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2
            [Equus caballus]
          Length = 2583

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|301784895|ref|XP_002927862.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like
            [Ailuropoda melanoleuca]
          Length = 2583

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEAKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|395505942|ref|XP_003757295.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 2
            [Sarcophilus harrisii]
          Length = 2884

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/670 (39%), Positives = 376/670 (56%), Gaps = 70/670 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 716  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 775

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
                  +S    KD         VKW  LPY++ TWE    +D+  +E++  L       
Sbjct: 776  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQL------- 828

Query: 716  ERQTLKKDAS--EDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHK 773
              Q  + D+   +  LP      +QS         E   G  L  +QLE LNWL   W+ 
Sbjct: 829  --QASRPDSRHLDRPLPNTWKKIEQSR--------EYKNGNQLREYQLEGLNWLLFNWYN 878

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
             +N ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  +LNV
Sbjct: 879  RRNCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTITNWEREFRTWT-DLNV 936

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
            V YHG   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +
Sbjct: 937  VVYHGSLVSRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCV 995

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
            ++DE HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS ++F
Sbjct: 996  IIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSETTF 1055

Query: 954  EEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAML 1013
             ++F DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L
Sbjct: 1056 MQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAIL 1115

Query: 1014 TKNYQILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVE 1060
             KN+  L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +
Sbjct: 1116 EKNFAFL---SKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETHNPAAPD 1172

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
            F  +  I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+D
Sbjct: 1173 FHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERID 1230

Query: 1121 GSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA 
Sbjct: 1231 GRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQ 1290

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSG-----SQ 1227
             R HRIGQ+K + VYRL+ R S E  +   A  KL LD+  +       N  G     S+
Sbjct: 1291 ARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSK 1350

Query: 1228 KEVEDILRWG 1237
            KE+ED+LR G
Sbjct: 1351 KEIEDLLRRG 1360


>gi|395505944|ref|XP_003757296.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 3
            [Sarcophilus harrisii]
          Length = 2891

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/670 (39%), Positives = 376/670 (56%), Gaps = 70/670 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 716  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 775

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
                  +S    KD         VKW  LPY++ TWE    +D+  +E++  L       
Sbjct: 776  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQL------- 828

Query: 716  ERQTLKKDAS--EDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHK 773
              Q  + D+   +  LP      +QS         E   G  L  +QLE LNWL   W+ 
Sbjct: 829  --QASRPDSRHLDRPLPNTWKKIEQSR--------EYKNGNQLREYQLEGLNWLLFNWYN 878

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
             +N ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  +LNV
Sbjct: 879  RRNCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTITNWEREFRTWT-DLNV 936

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVL 893
            V YHG   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +
Sbjct: 937  VVYHGSLVSRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCV 995

Query: 894  VVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSF 953
            ++DE HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS ++F
Sbjct: 996  IIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSETTF 1055

Query: 954  EEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAML 1013
             ++F DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L
Sbjct: 1056 MQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAIL 1115

Query: 1014 TKNYQILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVE 1060
             KN+  L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +
Sbjct: 1116 EKNFAFL---SKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETHNPAAPD 1172

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
            F  +  I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+D
Sbjct: 1173 FHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERID 1230

Query: 1121 GSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA 
Sbjct: 1231 GRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQ 1290

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSG-----SQ 1227
             R HRIGQ+K + VYRL+ R S E  +   A  KL LD+  +       N  G     S+
Sbjct: 1291 ARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSK 1350

Query: 1228 KEVEDILRWG 1237
            KE+ED+LR G
Sbjct: 1351 KEIEDLLRRG 1360


>gi|282165704|ref|NP_001164100.1| chromodomain-helicase-DNA-binding protein 8 isoform 1 [Homo sapiens]
 gi|317373586|sp|Q9HCK8.5|CHD8_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
            Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8;
            AltName: Full=Helicase with SNF2 domain 1
          Length = 2581

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|410961826|ref|XP_003987479.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 8 [Felis catus]
          Length = 2594

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|426376290|ref|XP_004054937.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
            [Gorilla gorilla gorilla]
          Length = 2581

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|397466069|ref|XP_003804795.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 8 [Pan paniscus]
          Length = 2581

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|332841815|ref|XP_003314292.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Pan
            troglodytes]
 gi|410305114|gb|JAA31157.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
          Length = 2581

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|391333969|ref|XP_003741382.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 1-like [Metaseiulus occidentalis]
          Length = 1456

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 269/688 (39%), Positives = 403/688 (58%), Gaps = 78/688 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENY--------KAKYGTTVINI----C 657
            +FL+KW   S++HN+W     L+   V   ++++NY        + K   T   I    C
Sbjct: 278  QFLIKWKNWSHLHNTWETMETLQSQGVKGIKRVDNYLKREEEVQRWKESATPEEIEYFDC 337

Query: 658  DE--------RWKQPQRVISLRSSKDGTREAF---VKWTGLPYDECTWEKLDEPAL-EKY 705
             +        R +  +R+IS R  +DG    F    KW GLPY +CTWE  D   + +K+
Sbjct: 338  QQEMTELLYLRHQVVERIIS-RKDRDGAPGEFDYYCKWEGLPYSDCTWE--DASLIRKKF 394

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
              + D F   ER T   D              + +   +  QP+ + G     L  +QLE
Sbjct: 395  KPIIDAFHSRERSTTIPDKHHRYF------TSRPKFHPIKTQPDFIGGSEHLELRDYQLE 448

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             +NWL   W K+ + ILADEMGLGKT+   +F++ L+ + +   P L++VPLST+  W  
Sbjct: 449  GVNWLVNSWCKANSCILADEMGLGKTIQTISFLNYLFNDHQLYGPFLMVVPLSTLVAWQR 508

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            EF  WAP LNVV Y G   +R  IR++EW+ +        T   KFNVLLTT E++L D+
Sbjct: 509  EFVNWAPELNVVTYLGDVLSRERIREFEWYVTG-------TKKIKFNVLLTTPEIMLKDA 561

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            +++  V W VL VDE HRLKN  ++L+  L  F  +HR+L+TGTPLQN++ E++ LL+F+
Sbjct: 562  TYVGEVDWAVLAVDEAHRLKNDEAQLYKTLQDFRTKHRLLITGTPLQNSLKELWALLHFI 621

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
            +P  FP+  +FE + +D    +   +L K + P++LRR+KKD  +++P K ER++ VE++
Sbjct: 622  EPDRFPTWDTFEGEHHD-AQDKGYSKLHKQLEPYLLRRVKKDVEKSLPAKVERILRVEMT 680

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL 1062
            ++Q +YY+ +LTKNY++L    KG +  S +NI+++L+K CNH  LI   E  +G  E  
Sbjct: 681  ALQKQYYKWILTKNYKMLTKGVKG-SHASFVNIMVELKKCCNHCLLIRLPEATNGQDELT 739

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
                I+ S KL LL  +L  L + GHRVLIFSQM ++LDI+ +YL +      ++R+DGS
Sbjct: 740  Q--LIRGSGKLLLLDKLLCRLKQTGHRVLIFSQMVRMLDIISEYLKMRRF--QFQRLDGS 795

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA  R
Sbjct: 796  IKGETRKQALDHFNAENSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQAR 855

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK---SG------------- 1225
            AHRIGQ  ++ +YRLV + SVEE I++ AK+K++LD L + +   SG             
Sbjct: 856  AHRIGQKNQVNIYRLVTKGSVEEDIIERAKRKMVLDHLVIQRMDTSGRTVLSKGGPSNSS 915

Query: 1226 ---------SQKEVEDILRWGTEELFND 1244
                     +++E+  IL++G E+LF +
Sbjct: 916  ANQSSSTPFNKEELAAILKFGAEDLFKE 943


>gi|380783899|gb|AFE63825.1| chromodomain-helicase-DNA-binding protein 8 isoform 1 [Macaca
            mulatta]
          Length = 2581

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|168060035|ref|XP_001782004.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
 gi|162666495|gb|EDQ53147.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
          Length = 1445

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 286/732 (39%), Positives = 407/732 (55%), Gaps = 91/732 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLA-KRKLENYKAKYG-------------TTVINICD 658
            EF +KW G+S +H SW+P S+L++L+  +K+ NY  K                 + ++  
Sbjct: 232  EFYIKWKGQSYLHCSWMPLSELELLSGYKKVVNYMKKIDEDRQVRQTLSPEEAELHDVSK 291

Query: 659  E-------RWKQPQRVISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHL 708
            E       ++ Q +RV + R+  D   E     VKW GL Y + TW K  + A  + S +
Sbjct: 292  EMELDLLKQYLQVERVFADRNRVDNEEEITEYLVKWKGLSYCDSTWFKDTDIAFAQ-SQI 350

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGD--------CQQSEIVALT----------EQPEE 750
             +   +    T +    + +  +GK D        C    I++L+          EQPE 
Sbjct: 351  DECKAREAETTFQGKPVDVQRRKGKDDTNFHSWEICIIFNILSLSLICLNMRKLEEQPEW 410

Query: 751  LKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLV 810
            LKGG L  +QLE LN+L   W    NVILADEMGLGKTV + + +  L    +   P LV
Sbjct: 411  LKGGTLRDYQLEGLNFLMNSWRNDTNVILADEMGLGKTVQSVSMLGFLQYAQQIPGPFLV 470

Query: 811  LVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNV 870
            +VPLST+ NW  EF  W P++NVV Y G   +R  + Q+E++        K   + KFN 
Sbjct: 471  VVPLSTITNWAKEFRKWLPDMNVVVYVGNRASRE-VSQHEFYTG-----RKTGRTIKFNT 524

Query: 871  LLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQN 930
            LLTTYE++L D + L  + W  L+VDE HRLKN  + L++ L  FS +++VL+TGTPLQN
Sbjct: 525  LLTTYEVVLKDKAVLSKIKWCYLMVDEAHRLKNCEASLYTTLQEFSTKNKVLVTGTPLQN 584

Query: 931  NIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVA---PHMLRRLKKDAMQ 987
            ++ E++ LL+FL    F S   F E + +L++  + +EL  L A   PH+LRR+ KD  +
Sbjct: 585  SVEELWALLHFLDSDKFKSKEHFTEHYKNLSSFDE-KELANLHAELRPHLLRRIIKDVEK 643

Query: 988  NIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPY 1047
            ++PPK ER++ VE+S +Q +YY+ +L +N+  L N G  V Q S+LNIV++L+K CNHP+
Sbjct: 644  SLPPKIERILRVEMSPLQKQYYKWILERNFNDL-NKGVRVNQVSLLNIVVELKKCCNHPF 702

Query: 1048 LIP----GTEPDSGSVEFLHEMRIK-ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDI 1102
            L      G   D+ + +     RI  +S KL +L  +L  L +  HRVLIFSQM K+LDI
Sbjct: 703  LFESADYGYGGDANTNDNNKIQRIVLSSGKLAILDKLLVRLKETKHRVLIFSQMVKMLDI 762

Query: 1103 LEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATAD 1161
            L DYL++      ++R+DGS     R  A+  FN   S  F FLLSTR+ GLGINLATAD
Sbjct: 763  LADYLSLR--GFQFQRLDGSTRADLRHQAMEHFNAPGSEDFCFLLSTRAGGLGINLATAD 820

Query: 1162 TVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKL------- 1214
            TVII+DSD+NP  D+QAM+RAHRIGQ   + +YR V+  SVEE IL+ AKKK+       
Sbjct: 821  TVIIFDSDWNPQNDLQAMSRAHRIGQRDVVNIYRFVISRSVEEDILERAKKKMASSKLIL 880

Query: 1215 ------MLDQLFVNKSGSQKEVED----------------ILRWGTEELFNDSPGINGKD 1252
                  +LD L + K  +Q  +E                 ILR+G EELF D      + 
Sbjct: 881  MPEFLCVLDHLVIQKLNAQGRLEKKEAKKGTGFDKNELAAILRFGAEELFKDDKNEEDQK 940

Query: 1253 MGENNTSIEEAV 1264
                N  I+E +
Sbjct: 941  SKLENMDIDEIL 952


>gi|410338051|gb|JAA37972.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
          Length = 2589

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|148710305|gb|EDL42251.1| mCG18716, isoform CRA_b [Mus musculus]
          Length = 2582

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 266/666 (39%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 669  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 728

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 729  DRILDESHSVDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 788

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    +  +  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 789  RVNRPQANAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 832

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 833  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 890

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 891  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 949

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 950  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1009

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1010 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1069

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF----------LH-E 1064
            N+  L          ++LN +M+LRK CNHPYLI G E +   +EF           H +
Sbjct: 1070 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILMEFREACHIIPQDFHLQ 1128

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              ++++ KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1129 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1186

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1187 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1246

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1247 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1306

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1307 DLLRKG 1312


>gi|417407016|gb|JAA50143.1| Putative chromatin remodeling complex swi/snf component swi2
            [Desmodus rotundus]
          Length = 2583

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 266/666 (39%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF----------LH-E 1064
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF           H +
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              ++++ KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|134114696|ref|XP_774056.1| hypothetical protein CNBH1020 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50256686|gb|EAL19409.1| hypothetical protein CNBH1020 [Cryptococcus neoformans var.
            neoformans B-3501A]
          Length = 1514

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 272/709 (38%), Positives = 390/709 (55%), Gaps = 86/709 (12%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKYGTTVINICDERWKQPQ--- 665
            V+  F +KW   S+IHN+    + LK     +K+ENY  K  T      D+R+  P+   
Sbjct: 277  VNLRFHIKWKDYSHIHNTDETYAFLKNYKGFKKVENYITKVWT-----IDQRYHHPEPDA 331

Query: 666  -----------------RVISLRSS----------KDGTREA------FVKWTGLPYDEC 692
                             R+  L+ S          K+  R+       FVKWT L Y +C
Sbjct: 332  AWKPTQEEMEQYEIDKERIKELQESYKIVERVLDEKEEKRKEGRATLFFVKWTNLQYSDC 391

Query: 693  TWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK 752
            TWE  ++  + +     +   +F ++  +       +  G  +  +     + E P  L 
Sbjct: 392  TWETYED--VMECQGAKEGIEEFHQRQARTTIPARSISYGIDN--RPTYQKIPENPPYLA 447

Query: 753  -GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVL 811
             GGAL P QL  LNWL   W K +N ILADEMGLGKTV + +F+S L+       P LV+
Sbjct: 448  CGGALKPFQLTGLNWLAYVWSKGENGILADEMGLGKTVQSVSFLSYLFHVQHQYGPFLVV 507

Query: 812  VPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVL 871
            VPLST+  W A+F  WAP LNV+ Y G A++R +IRQ+E+             + KFNVL
Sbjct: 508  VPLSTISAWQAQFKRWAPELNVICYMGSARSRDVIRQFEFGP---------LKNLKFNVL 558

Query: 872  LTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNN 931
            LTTYE IL D   L+ + W+VL VDE HRLKN  S+L+  L SF    ++L+TGTPLQNN
Sbjct: 559  LTTYEFILKDRQDLQQIKWQVLAVDEAHRLKNHESQLYEALKSFWSASKLLITGTPLQNN 618

Query: 932  IGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQ--KVEELKKLVAPHMLRRLKKDAMQNI 989
            + E+  L++FL P  F   + F+   ND +  Q  K+++L   +   MLRRLKKD ++ +
Sbjct: 619  VKELLALMHFLMPEKFQLANDFD--LNDASEDQGAKIKDLHDKLTTLMLRRLKKDVVKEL 676

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQ-SMLNIVMQLRKVCNHPYL 1048
            P K+ER++ VE+S++Q  YY+ +LTKN+ +L    KG  QQ S++N+ M+L+K  NHPYL
Sbjct: 677  PTKSERILRVEMSAMQTHYYKNILTKNFAVL---SKGGTQQVSLMNVAMELKKASNHPYL 733

Query: 1049 IPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
              G E  S     +    +  S K+  L  +L  L  +GHRVLIFSQM +LLDI+ DY+ 
Sbjct: 734  FEGAEDRSKPANEILRGLVMNSGKMVCLDMLLSRLKSDGHRVLIFSQMVRLLDIISDYMT 793

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYD 1167
                   ++R+DG+V    R+ +I  FN   S  F FLLSTR+ GLGINL TADTVII+D
Sbjct: 794  AR--GYVHQRLDGTVPSDVRKKSIEHFNAPGSPDFAFLLSTRAGGLGINLETADTVIIFD 851

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG-- 1225
            SD+NP  D+QAM RAHRIGQ + + ++RLV + ++EE IL+ A +K++L+   +NK    
Sbjct: 852  SDYNPQNDLQAMARAHRIGQQRHVSIFRLVSKGTIEEDILERAMRKMLLEYAIINKMDTT 911

Query: 1226 -----------------SQKEVEDILRWGTEELFNDSPGINGKDMGENN 1257
                             S++E+  IL++G   +F        K + E N
Sbjct: 912  GAHINGSSTPKDKNVDLSKEELSAILKFGARNMFKTDDSTQNKKLDEMN 960


>gi|348577591|ref|XP_003474567.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 8-like [Cavia porcellus]
          Length = 2582

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/665 (40%), Positives = 372/665 (55%), Gaps = 61/665 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    +  +  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQANAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG------TEPDSGSVEFLHEMRIKA 1069
            N+  L          ++LN +M+LRK CNHPYLI G      TE    S    H+  ++A
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREASHIIPHDFHLQA 1127

Query: 1070 ----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
                + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V  
Sbjct: 1128 MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVRG 1185

Query: 1126 GDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HR
Sbjct: 1186 NLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHR 1245

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVED 1232
            IGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+ED
Sbjct: 1246 IGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIED 1305

Query: 1233 ILRWG 1237
            +LR G
Sbjct: 1306 LLRKG 1310


>gi|297694660|ref|XP_002824590.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
            [Pongo abelii]
          Length = 2581

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|410223700|gb|JAA09069.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
 gi|410249874|gb|JAA12904.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
 gi|410338049|gb|JAA37971.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
          Length = 2581

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|417515689|gb|JAA53657.1| chromodomain-helicase-DNA-binding protein 8 isoform 1 [Sus scrofa]
          Length = 2583

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|296214425|ref|XP_002753816.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
            [Callithrix jacchus]
          Length = 2583

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|441667219|ref|XP_003260841.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Nomascus
            leucogenys]
          Length = 2573

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|355778379|gb|EHH63415.1| hypothetical protein EGM_16381 [Macaca fascicularis]
          Length = 2446

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 374/667 (56%), Gaps = 63/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 532  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 591

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 592  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 651

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 652  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 695

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 696  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 753

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 754  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 812

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 813  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 872

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 873  DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 932

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 933  NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 991

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 992  AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1049

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1050 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1109

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1110 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1169

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1170 DLLRKGA 1176


>gi|344305959|ref|XP_003421657.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Loxodonta
            africana]
          Length = 2581

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 666  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 725

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 726  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 785

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 786  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 829

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 830  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 887

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 888  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 946

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 947  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1006

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1007 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1066

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1067 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1125

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1126 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1183

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1184 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1243

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1244 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1303

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1304 DLLRKG 1309


>gi|402875590|ref|XP_003901583.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
            [Papio anubis]
          Length = 2581

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|383420319|gb|AFH33373.1| chromodomain-helicase-DNA-binding protein 8 isoform 1 [Macaca
            mulatta]
          Length = 2581

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|355710194|gb|EHH31658.1| Chromodomain-helicase-DNA-binding protein 9 [Macaca mulatta]
          Length = 2901

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/667 (40%), Positives = 373/667 (55%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDAYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1354 DLLRRGA 1360


>gi|432857891|ref|XP_004068777.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like [Oryzias
            latipes]
          Length = 3255

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 275/693 (39%), Positives = 384/693 (55%), Gaps = 53/693 (7%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTT--VINICDERWKQPQ--- 665
            EF VK+   S +H  W    +L+   +  +K++ ++ K      +    DE    P    
Sbjct: 332  EFYVKYRNFSYLHCKWATLVELEKDPRIHQKIKRFRTKQAQMKHLFTEPDEDLFNPDYVE 391

Query: 666  --RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
              RV+ +  + D           VKW  L Y+E TWE  ++   EK         +FE +
Sbjct: 392  IDRVLEVAITTDPETCEEVTHYLVKWCSLSYEEATWELQEDLDPEK-------IREFE-E 443

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
              K+ A    + R   +  Q     L    +   G  L  +QLE +NWL   W+  KN I
Sbjct: 444  IQKRPADLRHVERPPPEKWQK----LENSRDYRSGNQLREYQLEGMNWLLFNWYNRKNCI 499

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  ++     + P L++ PLST+ NW  EF  W  ++NV+ YHG
Sbjct: 500  LADEMGLGKTIQSITFLYEIFS-MGIRGPFLIIAPLSTITNWEREFRTWT-HMNVIVYHG 557

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R +I QYE    D    N      KF+ L+TT+EMI+ D   LR + W  +V+DE 
Sbjct: 558  SQISRQMILQYEMFYRDSQG-NNIPGGLKFHGLITTFEMIMTDCPELRKLQWRCVVIDEA 616

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L   + +H+VLLTGTPLQN++ E+++LLNFL+P  FPS  +F E+F 
Sbjct: 617  HRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSEGAFLEEFG 676

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 677  DLKTDEQVKKLQSILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFS 736

Query: 1019 ILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHEM 1065
             L    KG  Q +M N++   M+LRK CNHPYLI G E            + + +F  + 
Sbjct: 737  FL---SKGANQHNMPNLINTMMELRKCCNHPYLITGAEEKILESFKKSHSADAQDFPLQA 793

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             I+A+ KL L+  +L  L   GH+VLIFSQM + LDILEDYL       TYER+DG V  
Sbjct: 794  MIQAAGKLVLIDKLLPKLLAGGHKVLIFSQMVRCLDILEDYLIQRR--YTYERIDGRVRG 851

Query: 1126 GDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQAAI RF   D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HR
Sbjct: 852  NLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHR 911

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF---VNKSGSQKEVEDILRWGTEEL 1241
            IGQSK + VYRL+ R S E  +   A  KL LD+     +N+ GS   V+ + +   E+L
Sbjct: 912  IGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSKLEVEDL 971

Query: 1242 FNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
                 G  G  M E +   +    D++Q  ++R
Sbjct: 972  LKK--GAYGALMDEEDEGSKFCEEDIDQILQRR 1002


>gi|119392064|ref|NP_963999.2| chromodomain-helicase-DNA-binding protein 8 [Mus musculus]
 gi|123778258|sp|Q09XV5.1|CHD8_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
            Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8;
            AltName: Full=Axis duplication inhibitor; Short=Duplin
 gi|77744590|gb|ABB02259.1| chromodomain helicase DNA binding protein 8 [Mus musculus]
          Length = 2582

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 266/666 (39%), Positives = 373/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 669  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 728

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     +  
Sbjct: 729  DRILDESHSVDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELR 788

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    +  +  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 789  RVNRPQANAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 832

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 833  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 890

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 891  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 949

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 950  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1009

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1010 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1069

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF----------LH-E 1064
            N+  L          ++LN +M+LRK CNHPYLI G E +   +EF           H +
Sbjct: 1070 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILMEFREACHIIPQDFHLQ 1128

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              ++++ KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1129 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1186

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1187 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1246

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1247 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1306

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1307 DLLRKG 1312


>gi|338723330|ref|XP_001915417.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 9-like [Equus caballus]
          Length = 2826

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 274/698 (39%), Positives = 383/698 (54%), Gaps = 72/698 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 717  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 776

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 777  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 830

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 831  ASRPDTRHLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 883

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 884  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 941

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 942  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 1000

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 1001 AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1060

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1061 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1120

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1121 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1177

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1178 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1235

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1236 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1295

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1296 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNVGGIQQLSKKEIE 1355

Query: 1232 DILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQ 1269
            D+LR G            G  MGE +   +    D++Q
Sbjct: 1356 DLLRRGA----------YGAIMGEEDEGSKFCEEDIDQ 1383


>gi|350586947|ref|XP_003482311.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8, partial [Sus
            scrofa]
          Length = 2567

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|296483394|tpg|DAA25509.1| TPA: chromodomain helicase DNA binding protein 8 [Bos taurus]
          Length = 2540

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 624  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 683

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 684  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 743

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 744  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 787

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 788  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 845

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 846  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 904

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 905  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 964

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 965  DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1024

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1025 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1083

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1084 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1141

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1142 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1201

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1202 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1261

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1262 DLLRKG 1267


>gi|281340559|gb|EFB16143.1| hypothetical protein PANDA_017702 [Ailuropoda melanoleuca]
          Length = 2448

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 374/667 (56%), Gaps = 63/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 532  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 591

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 592  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEAKIREFKRIQSRHPELK 651

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 652  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 695

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 696  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 753

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 754  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 812

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 813  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 872

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 873  DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 932

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 933  NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 991

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 992  AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1049

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1050 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1109

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1110 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1169

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1170 DLLRKGA 1176


>gi|410261570|gb|JAA18751.1| chromodomain helicase DNA binding protein 9 [Pan troglodytes]
          Length = 2883

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/666 (40%), Positives = 373/666 (56%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1354 DLLRRG 1359


>gi|34328020|dbj|BAB13390.3| KIAA1564 protein [Homo sapiens]
          Length = 2432

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 374/667 (56%), Gaps = 63/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 518  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 577

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 578  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 637

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 638  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 681

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 682  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 739

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 740  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 798

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 799  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 858

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 859  DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 918

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 919  NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 977

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 978  AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1035

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1036 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1095

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1096 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1155

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1156 DLLRKGA 1162


>gi|95147342|ref|NP_079410.4| chromodomain-helicase-DNA-binding protein 9 [Homo sapiens]
          Length = 2881

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/666 (40%), Positives = 373/666 (56%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1354 DLLRRG 1359


>gi|215273951|sp|Q3L8U1.2|CHD9_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 9;
            Short=CHD-9; AltName: Full=ATP-dependent helicase CHD9;
            AltName: Full=Chromatin-related mesenchymal modulator;
            Short=CReMM; AltName: Full=Chromatin-remodeling factor
            CHROM1; AltName: Full=Kismet homolog 2; AltName:
            Full=PPAR-alpha-interacting complex protein 320 kDa;
            AltName: Full=Peroxisomal proliferator-activated receptor
            A-interacting complex 320 kDa protein
 gi|187954623|gb|AAI40816.1| CHD9 protein [Homo sapiens]
          Length = 2897

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/666 (40%), Positives = 373/666 (56%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1354 DLLRRG 1359


>gi|114662481|ref|XP_510966.2| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 5 [Pan
            troglodytes]
 gi|410050324|ref|XP_003952892.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Pan
            troglodytes]
 gi|410303510|gb|JAA30355.1| chromodomain helicase DNA binding protein 9 [Pan troglodytes]
          Length = 2882

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/666 (40%), Positives = 373/666 (56%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1354 DLLRRG 1359


>gi|299751086|ref|XP_001830045.2| transcription regulator [Coprinopsis cinerea okayama7#130]
 gi|298409213|gb|EAU91710.2| transcription regulator [Coprinopsis cinerea okayama7#130]
          Length = 1441

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/601 (41%), Positives = 351/601 (58%), Gaps = 68/601 (11%)

Query: 679  EAFVKWTGLPYDECTWEKLDE---------------PALEKYSHLTDLFVQFERQTLKKD 723
            E F KWTGL Y+ CTWE   +                A  K+ + +  + +  R   KK 
Sbjct: 313  EYFCKWTGLGYEHCTWEAQKDINPIARDQIAAYRQREAEAKFPYRSTYYPRNNRPRFKKI 372

Query: 724  ASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEM 783
             ++ E  R                     GG L   QL  LNWL   W K  N ILADEM
Sbjct: 373  ETDPEYIRE-------------------TGGQLKDFQLTGLNWLAYIWSKGDNGILADEM 413

Query: 784  GLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKAR 843
            GLGKTV   +F+S L+ E     P LV+VPLST+  W ++FA WAP++NVV Y G A AR
Sbjct: 414  GLGKTVQTVSFLSYLFHEMNQYGPFLVIVPLSTITAWQSQFATWAPDMNVVTYIGNAPAR 473

Query: 844  AIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKN 903
             +IR+YE+  + P  +       K NVLLTTYE+IL D+  L  + W+ L VDE HRLKN
Sbjct: 474  DVIRRYEF-GTPPKKV-------KMNVLLTTYELILRDAKELCEIKWQALAVDEAHRLKN 525

Query: 904  SGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTT 963
            S S+L+  L SFS   ++L+TGTPLQNN+ E+ +L++FL P  F   + F+   ND    
Sbjct: 526  SESQLYEALRSFSAASKLLITGTPLQNNVRELMSLMHFLMPDKFALTNEFD--LND-ADH 582

Query: 964  QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNI 1023
             K++EL + +  +MLRRLK+D + ++P K+ER++ VE+S++Q  +Y+ +LTKN+  L   
Sbjct: 583  DKIKELHQQLESYMLRRLKRDVLTSLPTKSERILRVEMSALQTHFYKNILTKNFAGLVKS 642

Query: 1024 GKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVL 1083
              G    S+LNI M+L+K  NHPYL  G E  + + E   +  + +S K+ LL  +L  L
Sbjct: 643  ANGNQNISLLNIAMELKKAANHPYLFDGAEVRTDNNEETLKGLVMSSGKMVLLDKLLARL 702

Query: 1084 YKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RF 1142
             ++GHRVLIFSQM ++LDIL DY+ +      ++R+DG V    R+ AI  FN + S  F
Sbjct: 703  RQDGHRVLIFSQMVRMLDILSDYMTLR--GYQHQRLDGMVGSDLRKKAIAHFNAENSPDF 760

Query: 1143 VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASV 1202
             FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM RAHRIGQ   + VYR V + ++
Sbjct: 761  AFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTM 820

Query: 1203 EERILQLAKKKLMLDQLFVNKSG--------------------SQKEVEDILRWGTEELF 1242
            EE +L+ AK+K++L+   +N+                      S+ E+  +L++G +++F
Sbjct: 821  EEDVLERAKRKMVLEYAIINQMDTTQAHLSSKGPKDTSKPEGLSRDELTAVLKYGAQKMF 880

Query: 1243 N 1243
            +
Sbjct: 881  D 881


>gi|410225536|gb|JAA09987.1| chromodomain helicase DNA binding protein 9 [Pan troglodytes]
          Length = 2883

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/666 (40%), Positives = 373/666 (56%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1354 DLLRRG 1359


>gi|402908371|ref|XP_003916919.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 2
            [Papio anubis]
          Length = 2885

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/667 (40%), Positives = 373/667 (55%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDAYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1354 DLLRRGA 1360


>gi|33641444|gb|AAQ24287.1| chromatin remodeling factor CHROM1 [Homo sapiens]
 gi|219521584|gb|AAI44623.1| CHD9 protein [Homo sapiens]
          Length = 2897

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/666 (40%), Positives = 373/666 (56%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1354 DLLRRG 1359


>gi|149604225|ref|XP_001512827.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
            [Ornithorhynchus anatinus]
          Length = 2885

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/670 (40%), Positives = 376/670 (56%), Gaps = 68/670 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADVEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
                  +S    KD         VKW  LPY++ TWE    +D+  +E++  L       
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQL------- 827

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKS 774
              Q  + D+   + P        S      EQ  E K G  L  +QLE LNWL   W+  
Sbjct: 828  --QASRPDSRRLDRP-------PSNTWNKIEQSREYKNGNQLREYQLEGLNWLLFNWYNR 878

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
            +N ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  +LNVV
Sbjct: 879  RNCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTITNWEREFRTWT-DLNVV 936

Query: 835  EYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
             YHG   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  ++
Sbjct: 937  VYHGSLVSRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVI 995

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            +DE HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F 
Sbjct: 996  IDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFM 1055

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
            ++F DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L 
Sbjct: 1056 QEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILE 1115

Query: 1015 KNYQILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEF 1061
            KN+  L    KG  Q ++ N+V   M+LRK CNHPYLI G E              + +F
Sbjct: 1116 KNFAFL---SKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETHSPTAPDF 1172

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
              +  ++++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG
Sbjct: 1173 HLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDG 1230

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  
Sbjct: 1231 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1290

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQK 1228
            R HRIGQ+K + VYRL+ R S E  +   A  KL LD+ +  + SG           S+K
Sbjct: 1291 RCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRESSIGGIQQLSKK 1350

Query: 1229 EVEDILRWGT 1238
            E+ED+LR G 
Sbjct: 1351 EIEDLLRRGA 1360


>gi|224104242|ref|XP_002313369.1| chromatin remodeling complex subunit [Populus trichocarpa]
 gi|222849777|gb|EEE87324.1| chromatin remodeling complex subunit [Populus trichocarpa]
          Length = 1748

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 270/692 (39%), Positives = 395/692 (57%), Gaps = 96/692 (13%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLA---------KRKLEN--YKAKYGTTVINICD--- 658
            EFL+KW G+S++H  W   S L+ L+         K+ +E+  Y+  +    I + D   
Sbjct: 457  EFLIKWKGQSHMHCQWKSFSDLQNLSGFKKVLNYTKKVMEDVRYRRSFTREEIEVNDVSK 516

Query: 659  -------ERWKQPQRVISLRSSKDGTR----EAFVKWTGLPYDECTWEK-----LDEPAL 702
                   ++  Q +R+I+ R +KD +     E  VKW GL Y E TWEK       + A+
Sbjct: 517  EMDLDLIKQNSQVERIIADRITKDSSGNVVPEYIVKWRGLSYAEATWEKDVDIAFAQDAI 576

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLE 762
            ++Y        +     +       +L R KG   ++ +  L EQPE L+GG L  +QLE
Sbjct: 577  DEY--------KAREAAIAVQGKMVDLQRKKG---KASLRKLDEQPEWLRGGKLRDYQLE 625

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LN+L   W    NVILADEMGLGKTV + + +  L    +   P LV+VPLST+ NW  
Sbjct: 626  GLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQISGPFLVVVPLSTLSNWAK 685

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            EF  W P++NV+ Y G   +R  + Q                  KF+ LLTTYE++L D 
Sbjct: 686  EFRKWLPDMNVIVYVGTRASRERVGQ----------------PIKFSALLTTYEVVLKDK 729

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L  + W  L+VDE HRLKNS ++L++ L  FS ++++L+TGTPLQN++ E++ LL+FL
Sbjct: 730  AVLSKIKWNYLMVDEAHRLKNSEAQLYTTLLEFSTKNKLLITGTPLQNSVEELWALLHFL 789

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
             P  F S   F   + +L++  + E   L   + PH+LRR+ KD  +++PPK ER++ VE
Sbjct: 790  DPDKFRSKDDFVHNYKNLSSFNENELANLHMELRPHILRRVIKDVEKSLPPKIERILRVE 849

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQLRKVCNHPYLIPGTEP---- 1054
            +S +Q +YY+ +L +N+    ++ KGV   Q S+LNIV++L+K CNHP+L    +     
Sbjct: 850  MSPLQKQYYKWILERNFH---DLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGG 906

Query: 1055 -----DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
                 DS  +E +    I +S KL +L  +L  L++  HRVLIFSQM ++LDI+  Y+++
Sbjct: 907  DISTNDSSKLERI----ILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDIIAQYMSL 962

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDS 1168
                  ++R+DGS     RQ A+  FN   S  F FLLSTR+ GLGINLATADTVII+DS
Sbjct: 963  R--GFQFQRLDGSTKAELRQQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDS 1020

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQK 1228
            D+NP  D+QAM+RAHRIGQ + + +YR V   SVEE IL+ AKKK++LD L + K  ++ 
Sbjct: 1021 DWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEG 1080

Query: 1229 EVED----------------ILRWGTEELFND 1244
             +E                 ILR+G EELF +
Sbjct: 1081 RLEKKETKKGSYFDKNELSAILRFGAEELFKE 1112


>gi|168029897|ref|XP_001767461.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681357|gb|EDQ67785.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1569

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 272/685 (39%), Positives = 393/685 (57%), Gaps = 67/685 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK-RKLENYKAKYG-------------TTVINICD 658
            EF +KW G+S +H  W+  S+L+ L+  +K+ NY  K                 + ++  
Sbjct: 233  EFYIKWKGQSYLHCQWMLLSELEPLSGYKKVLNYMKKVDEDREIRQSLSPEEAELHDVSK 292

Query: 659  E-------RWKQPQRVISLRSSKDGTRE---AFVKWTGLPYDECTWEKLDEPALEKYSHL 708
            E       ++ Q +RV + R+  D   E     VKW GL Y + TWEK  + A  + + +
Sbjct: 293  EMELDLLKQYLQVERVFADRNRMDNDEEIIEYLVKWKGLSYCDSTWEKDTDIAFAQ-AQI 351

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLR 768
             +   +    T +    + +  +GK   ++     L EQPE LKGG L  +QLE LN+L 
Sbjct: 352  DEYKAREAATTFQGKLVDAQRRKGKVSMRK-----LEEQPEWLKGGTLRDYQLEGLNFLM 406

Query: 769  KCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWA 828
              W    NVILADEMGLGKTV + + +  L    +   P LV+VPLST+ NW  EF  W 
Sbjct: 407  NSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTITNWAKEFRKWL 466

Query: 829  PNLNVVEYHGCAKARAI--IRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLR 886
            P++NVV Y G   +R +   +Q+E++        K   + KFN LLTTYE++L D + L 
Sbjct: 467  PDMNVVVYVGNRASREVSTCQQHEFYTG-----RKTGRTIKFNTLLTTYEVVLKDKAVLS 521

Query: 887  GVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPAS 946
             + W  L+VDE HRLKN  + L++ L  FS +++VL+TGTPLQN++ E++ LL+FL    
Sbjct: 522  RIKWCYLMVDEAHRLKNCEASLYTTLQEFSTKNKVLVTGTPLQNSVEELWALLHFLDSDK 581

Query: 947  FPSLSSFEEKFNDLTTTQKVE--ELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
            F S   F E + +L++  + E   L   + PH+LRR+ KD  +++PPK ER++ VE+S +
Sbjct: 582  FKSKEQFTEHYKNLSSFDEKELANLHAELRPHLLRRVIKDVEKSLPPKIERILRVEMSPL 641

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHE 1064
            Q +YY+ +L +N+  L N G  V Q S+LNIV++L+K CNHP+L    +   G    +++
Sbjct: 642  QKQYYKWILERNFNDL-NKGVRVNQVSLLNIVVELKKCCNHPFLFESADHGYGGDANMND 700

Query: 1065 MR-----IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERV 1119
                   + +S KL +L  +L  L +  HRVLIFSQM K+LDIL DY+++      ++R+
Sbjct: 701  NNKVQRIVLSSGKLAILDKLLIRLKETNHRVLIFSQMVKMLDILADYMSLR--GFQFQRL 758

Query: 1120 DGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            DGS     R  A+  FN   S  F FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA
Sbjct: 759  DGSTRSDLRHQAMEHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA 818

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKL---MLDQLFVNKSGSQKEVED--- 1232
            M+RAHRIGQ   + +YR V+  SVEE IL+ AKKK+   +LD L + K  +Q  +E    
Sbjct: 819  MSRAHRIGQRDVVNIYRFVISRSVEEDILERAKKKMANRVLDHLVIQKLNAQGRLEKKEA 878

Query: 1233 -------------ILRWGTEELFND 1244
                         ILR+G EELF D
Sbjct: 879  KKGTGFDKNELAAILRFGAEELFKD 903


>gi|355693101|gb|EHH27704.1| hypothetical protein EGK_17972 [Macaca mulatta]
          Length = 2446

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 374/667 (56%), Gaps = 63/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 532  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 591

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 592  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 651

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 652  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 695

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 696  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 753

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 754  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 812

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 813  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 872

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 873  DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 932

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 933  NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 991

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 992  AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1049

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1050 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1109

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1110 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1169

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1170 DLLRKGA 1176


>gi|149604227|ref|XP_001512847.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 2
            [Ornithorhynchus anatinus]
          Length = 2876

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/670 (40%), Positives = 376/670 (56%), Gaps = 68/670 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADVEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
                  +S    KD         VKW  LPY++ TWE    +D+  +E++  L       
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQL------- 827

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKS 774
              Q  + D+   + P        S      EQ  E K G  L  +QLE LNWL   W+  
Sbjct: 828  --QASRPDSRRLDRP-------PSNTWNKIEQSREYKNGNQLREYQLEGLNWLLFNWYNR 878

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
            +N ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  +LNVV
Sbjct: 879  RNCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTITNWEREFRTWT-DLNVV 936

Query: 835  EYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
             YHG   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  ++
Sbjct: 937  VYHGSLVSRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVI 995

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            +DE HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F 
Sbjct: 996  IDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFM 1055

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
            ++F DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L 
Sbjct: 1056 QEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILE 1115

Query: 1015 KNYQILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEF 1061
            KN+  L    KG  Q ++ N+V   M+LRK CNHPYLI G E              + +F
Sbjct: 1116 KNFAFL---SKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETHSPTAPDF 1172

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
              +  ++++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG
Sbjct: 1173 HLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDG 1230

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  
Sbjct: 1231 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1290

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQK 1228
            R HRIGQ+K + VYRL+ R S E  +   A  KL LD+ +  + SG           S+K
Sbjct: 1291 RCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRESSIGGIQQLSKK 1350

Query: 1229 EVEDILRWGT 1238
            E+ED+LR G 
Sbjct: 1351 EIEDLLRRGA 1360


>gi|395861636|ref|XP_003803087.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Otolemur
            garnettii]
          Length = 2584

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|297283992|ref|XP_002808345.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 9-like [Macaca mulatta]
          Length = 2901

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/667 (40%), Positives = 373/667 (55%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDAYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1354 DLLRRGA 1360


>gi|440902098|gb|ELR52941.1| Chromodomain-helicase-DNA-binding protein 8 [Bos grunniens mutus]
          Length = 2448

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 374/667 (56%), Gaps = 63/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 532  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 591

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 592  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 651

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 652  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 695

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 696  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 753

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 754  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 812

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 813  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 872

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 873  DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 932

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 933  NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 991

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 992  AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1049

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1050 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1109

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1110 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1169

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1170 DLLRKGA 1176


>gi|426232816|ref|XP_004010416.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 8 [Ovis aries]
          Length = 2583

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|402908369|ref|XP_003916918.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
            [Papio anubis]
          Length = 2901

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/667 (40%), Positives = 373/667 (55%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDAYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1354 DLLRRGA 1360


>gi|410343035|gb|JAA40464.1| chromodomain helicase DNA binding protein 9 [Pan troglodytes]
          Length = 2883

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/666 (40%), Positives = 373/666 (56%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1354 DLLRRG 1359


>gi|119603200|gb|EAW82794.1| chromodomain helicase DNA binding protein 9, isoform CRA_b [Homo
            sapiens]
          Length = 2785

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/666 (40%), Positives = 373/666 (56%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHK--RYLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1354 DLLRRG 1359


>gi|297698733|ref|XP_002826464.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 9 [Pongo abelii]
          Length = 2898

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/666 (40%), Positives = 373/666 (56%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1354 DLLRRG 1359


>gi|51476360|emb|CAH18170.1| hypothetical protein [Homo sapiens]
          Length = 2302

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 374/667 (56%), Gaps = 63/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 388  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 447

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 448  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 507

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 508  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 551

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 552  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 609

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 610  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 668

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 669  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 728

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 729  NFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 788

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 789  NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 847

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 848  AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 905

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 906  GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 965

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 966  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1025

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1026 DLLRKGA 1032


>gi|402875592|ref|XP_003901584.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2
            [Papio anubis]
          Length = 2302

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 374/667 (56%), Gaps = 63/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 388  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 447

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 448  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 507

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 508  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 551

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 552  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 609

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 610  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 668

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 669  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 728

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 729  DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 788

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 789  NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 847

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 848  AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 905

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 906  GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 965

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 966  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1025

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1026 DLLRKGA 1032


>gi|297297436|ref|XP_001096619.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Macaca
            mulatta]
          Length = 2301

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 374/667 (56%), Gaps = 63/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 388  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 447

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 448  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 507

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 508  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 551

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 552  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 609

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 610  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 668

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 669  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 728

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 729  DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 788

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 789  NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 847

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 848  AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 905

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 906  GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 965

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 966  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1025

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1026 DLLRKGA 1032


>gi|441597794|ref|XP_003263031.2| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Nomascus
            leucogenys]
          Length = 2612

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/667 (40%), Positives = 373/667 (55%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHK--RYLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSG-----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +       N  G     S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRENNVGGIQQLSKKEIE 1353

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1354 DLLRRGA 1360


>gi|345780979|ref|XP_532624.3| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
            [Canis lupus familiaris]
          Length = 2583

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|357602534|gb|EHJ63440.1| chromodomain-helicase-DNA-binding protein 1 [Danaus plexippus]
          Length = 1822

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 279/694 (40%), Positives = 395/694 (56%), Gaps = 87/694 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENY----------KAKYGTTVINI--C 657
            ++L+KW G S+IHN+W  E  L   KV   +KLENY          + + G   I+   C
Sbjct: 302  QYLIKWKGWSHIHNTWESEKSLNEQKVKGLKKLENYIKKEADLSWWRQQAGPEDIDYYEC 361

Query: 658  DERWKQP--------QRVISLRSSK---DGT-REAFVKWTGLPYDECTWEKLDEPALEKY 705
                +Q         +R+I+ ++ +    GT  E F KW  LPY + TWE  D   +EK 
Sbjct: 362  QSELQQELVKTYNNVERIIAEQTRELEGGGTAHEYFCKWESLPYADATWE--DSSLIEK- 418

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL---KGGALFPHQLE 762
                +    F+ +   K       P  K   ++ +   + EQPE +   +   L  +Q++
Sbjct: 419  -RWPEKAENFKSREAAKTTPSRHCPVLK---RRPKFHQVKEQPEYMGKDQTYVLRDYQMD 474

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  +VILADEMGLGKT+    F+  L+   +   P L +VPLSTM  W  
Sbjct: 475  GLNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFKSQQLYGPFLCVVPLSTMTAWQR 534

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            EFA WAP++NVV Y G   +R IIRQ+EW  +    L       KFN +LTTYE++L D 
Sbjct: 535  EFAQWAPDINVVTYIGDVTSRDIIRQFEWSFASSKRL-------KFNAILTTYEILLKDR 587

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
              LR   W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+F+
Sbjct: 588  QFLRSFSWACLLVDEAHRLKNDDSLLYKALKEFETNHRLLVTGTPLQNSLKELWALLHFI 647

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F +   FE+   D   T+  E+L K + P +LRR KKD  +++P K E+++ VE++
Sbjct: 648  MPYKFETWEEFEKDHED-AATKGYEKLHKQLEPFILRRQKKDVEKSLPAKVEQILRVEMT 706

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD------- 1055
            SIQ +YY+ +LTKNY  LR   KG +  + +NIV++L+K CNH  L   T+P+       
Sbjct: 707  SIQKQYYKWILTKNYSALRKGVKG-SINTFINIVIELKKCCNHALL---TKPEDFESRAS 762

Query: 1056 ---SGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFG 1112
               + +VE L    ++ S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL     
Sbjct: 763  LATTDAVEKL----LRGSGKLLLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQRRHF 818

Query: 1113 PKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFN 1171
            P  ++R+DGS+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+N
Sbjct: 819  P--FQRLDGSIKGEIRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWN 876

Query: 1172 PHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---------- 1221
            P  D+QA  RAHRIGQ  ++ +YRLV   SVEE I++ AK+K++LD L +          
Sbjct: 877  PQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEDIVERAKRKMVLDHLVIQRMDTTGRTV 936

Query: 1222 -----------NKSGSQKEVEDILRWGTEELFND 1244
                       N   +++++  IL++G EELF D
Sbjct: 937  LNKRDATGTSANNPFNKEDLNAILKFGAEELFKD 970


>gi|332841817|ref|XP_001153522.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 3 [Pan
            troglodytes]
 gi|426376292|ref|XP_004054938.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2
            [Gorilla gorilla gorilla]
 gi|410338053|gb|JAA37973.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
          Length = 2302

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 374/667 (56%), Gaps = 63/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 388  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 447

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 448  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 507

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 508  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 551

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 552  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 609

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 610  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 668

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 669  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 728

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 729  DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 788

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 789  NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 847

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 848  AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 905

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 906  GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 965

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 966  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1025

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1026 DLLRKGA 1032


>gi|114326455|ref|NP_065971.2| chromodomain-helicase-DNA-binding protein 8 isoform 2 [Homo sapiens]
 gi|225356486|gb|AAI56440.1| Chromodomain helicase DNA binding protein 8 [synthetic construct]
          Length = 2302

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 374/667 (56%), Gaps = 63/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 388  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 447

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 448  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 507

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 508  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 551

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 552  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 609

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 610  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 668

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 669  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 728

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 729  DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 788

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 789  NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 847

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 848  AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 905

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 906  GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 965

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 966  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1025

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1026 DLLRKGA 1032


>gi|296214427|ref|XP_002753817.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2
            [Callithrix jacchus]
          Length = 2304

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 374/667 (56%), Gaps = 63/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 388  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 447

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 448  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 507

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 508  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 551

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 552  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 609

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 610  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 668

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 669  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 728

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 729  DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 788

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 789  NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 847

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 848  AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 905

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 906  GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 965

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 966  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1025

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1026 DLLRKGA 1032


>gi|403264249|ref|XP_003924402.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2
            [Saimiri boliviensis boliviensis]
          Length = 2302

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 374/667 (56%), Gaps = 63/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 388  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 447

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 448  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 507

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 508  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 551

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 552  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 609

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 610  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 668

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 669  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 728

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 729  DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 788

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 789  NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 847

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 848  AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 905

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 906  GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 965

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 966  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1025

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1026 DLLRKGA 1032


>gi|50547625|ref|XP_501282.1| YALI0C00363p [Yarrowia lipolytica]
 gi|49647149|emb|CAG81577.1| YALI0C00363p [Yarrowia lipolytica CLIB122]
          Length = 1320

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 283/739 (38%), Positives = 395/739 (53%), Gaps = 114/739 (15%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENYKA----KYGTTVINICDE-------- 659
            EF +KW   S++HN+W     L      ++++NY      +Y     +   E        
Sbjct: 135  EFYIKWQNYSHLHNTWETYDSLAGFKGIKRVDNYIKLNVLEYAELQRDASPEDIEAMELR 194

Query: 660  ---------RWKQPQRVI-SLRSSKDGTR---EAFVKWTGLPYDECTWEKLDEPALEKYS 706
                      +K  +R+I S R + D      +  VKW  L Y + TWE  +E A     
Sbjct: 195  REREQEEYAEYKLVERIIASDRVAVDNGATQLQYLVKWKRLNYSDATWEDAEEIA----- 249

Query: 707  HLTDLFVQFERQTLKKDASEDELPR------GKGDCQQSEIVA---------LTEQPEEL 751
                              +EDE+ R       K +  QS +           LTEQP  +
Sbjct: 250  ----------------KIAEDEVERFQDRLNSKINPSQSAVYPANSRPPFEKLTEQPGFI 293

Query: 752  KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVL 811
            KGG L   QL  +NW+   W +++N ILADEMGLGKTV   AF+S L    K   P LV+
Sbjct: 294  KGGELRDFQLTGINWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLVYARKQHGPHLVV 353

Query: 812  VPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVL 871
            VPLST+P W   F  WAP +N + Y G  ++R  +R +E++       NKK    KFNVL
Sbjct: 354  VPLSTVPAWQETFEFWAPGINYLAYLGNTESRKALRDHEFYNKTG---NKKP---KFNVL 407

Query: 872  LTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNN 931
            LTTYE IL D + L  + W+ L VDE HRLKN+ S L+  L  F   +R+L+TGTPLQNN
Sbjct: 408  LTTYEYILKDRAELGSIKWQYLAVDEAHRLKNAESALYESLKEFRVANRLLITGTPLQNN 467

Query: 932  IGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQK--VEELKKLVAPHMLRRLKKDAMQNI 989
            I E+  L++FL P         E  F +    Q+  + EL K + P +LRRLKKD  +++
Sbjct: 468  IKELAALVDFLMPGKLTI--DLEINFENPDEEQEGYIRELHKRLQPFILRRLKKDVEKSL 525

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P KTER++ VE+S +Q +YY+ +++KNY  L     G  Q S+LNI+ +L+K  NHPYL 
Sbjct: 526  PSKTERILRVEMSDMQQDYYKNIISKNYTALNAGATGGHQMSLLNIMTELKKASNHPYLF 585

Query: 1050 PGTEP-------DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDI 1102
            P  E        +  S E +    I  S K+ LL  +L  L K+GHRVLIFSQM ++LDI
Sbjct: 586  PTAESKFLSLAENGASRENVFRGMIMTSGKMVLLDKLLTQLKKDGHRVLIFSQMVRMLDI 645

Query: 1103 LEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATAD 1161
            L DYL I+     ++R+DG+V    R+ AI  +N  D + FVFLLSTR+ GLGINL TAD
Sbjct: 646  LGDYLQIK--GYQFQRLDGTVPSATRRIAIDHYNAPDSNDFVFLLSTRAGGLGINLMTAD 703

Query: 1162 TVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            TVII+DSD+NP AD+QAM RAHRIGQ   ++VYR V + +VEE++L+ A+KK++L+   +
Sbjct: 704  TVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEQVLERARKKMILEYAII 763

Query: 1222 -----------NKSG--SQKEVEDILRWGTEELF--NDSPG-----------------IN 1249
                       NK    S  E+ +IL++G   +F  ND+                   I 
Sbjct: 764  SLGITDKGSSNNKKTEPSTSELSEILKFGAGNMFKANDNQDKLENMNLDDVLNHAEDHIT 823

Query: 1250 GKDMGENNTSIEEAVRDLE 1268
              D+GE++   EE ++  E
Sbjct: 824  TPDLGESHLGGEEFLKQFE 842


>gi|301752864|ref|XP_002912282.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like
            [Ailuropoda melanoleuca]
          Length = 2885

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 373/667 (55%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 717  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 776

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 777  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 830

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        + I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 831  ASRPDTRHLDRP-------PANIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 883

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 884  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 941

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 942  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 1000

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 1001 AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1060

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1061 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1120

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1121 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1177

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1178 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1235

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1236 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1295

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1296 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1355

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1356 DLLRRGA 1362


>gi|334311692|ref|XP_003339651.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 9-like [Monodelphis domestica]
          Length = 2881

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/670 (39%), Positives = 373/670 (55%), Gaps = 68/670 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K+  +K +         D  E    P  V 
Sbjct: 714  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIXRFKLRQAQRAHFFADMEEEPFNPDYVE 773

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
                  +S    KD         VKW  LPY++ TWE    +D+  +E++  L       
Sbjct: 774  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQL------- 826

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKS 774
              Q  + D+   + P               E   E K G  L  +QLE LNWL   W+  
Sbjct: 827  --QASRPDSRHLDRP-------PPNTWKKIEHSREYKNGNQLREYQLEGLNWLLFNWYNR 877

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
            +N ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  +LNVV
Sbjct: 878  RNCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTITNWEREFRTWT-DLNVV 935

Query: 835  EYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
             YHG   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  ++
Sbjct: 936  VYHGSLVSRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVI 994

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            +DE HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F 
Sbjct: 995  IDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFM 1054

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
            ++F DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L 
Sbjct: 1055 QEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILE 1114

Query: 1015 KNYQILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEF 1061
            KN+  L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F
Sbjct: 1115 KNFAFL---SKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKESHNPAAPDF 1171

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
              +  I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG
Sbjct: 1172 HLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDG 1229

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  
Sbjct: 1230 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQA 1289

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSG-----SQK 1228
            R HRIGQ+K + VYRL+ R S E  +   A  KL LD+  +       N  G     S+K
Sbjct: 1290 RCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKK 1349

Query: 1229 EVEDILRWGT 1238
            E+ED+LR G 
Sbjct: 1350 EIEDLLRRGA 1359


>gi|338717123|ref|XP_001918380.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
            [Equus caballus]
          Length = 2304

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 374/667 (56%), Gaps = 63/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 388  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 447

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 448  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 507

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 508  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 551

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 552  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 609

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 610  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 668

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 669  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 728

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 729  DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 788

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 789  NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 847

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 848  AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 905

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 906  GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 965

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 966  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1025

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1026 DLLRKGA 1032


>gi|197251949|ref|NP_075222.2| chromodomain-helicase-DNA-binding protein 8 [Rattus norvegicus]
 gi|226706290|sp|Q9JIX5.2|CHD8_RAT RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
            Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8;
            AltName: Full=Axis duplication inhibitor; Short=Duplin
 gi|149033674|gb|EDL88472.1| chromodomain helicase DNA binding protein 8, isoform CRA_a [Rattus
            norvegicus]
          Length = 2581

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 266/666 (39%), Positives = 374/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSVDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    +  +  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQANAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF----------LH-E 1064
            N+  L          ++LN +M+LRK CNHPYLI G E +   +EF           H +
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILMEFREACHIIPQDFHLQ 1126

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              ++++ KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|351705244|gb|EHB08163.1| Chromodomain-helicase-DNA-binding protein 8 [Heterocephalus glaber]
          Length = 2455

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 372/666 (55%), Gaps = 61/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 532  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 591

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 592  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 651

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    +  +  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 652  RVNRPQANAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 695

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 696  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 753

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 754  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 812

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 813  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 872

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 873  DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 932

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG------TEPDSGSVEFLHEMRIKA 1069
            N+  L          ++LN +M+LRK CNHPYLI G      TE    S    H+  ++A
Sbjct: 933  NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREASHIIPHDFHLQA 992

Query: 1070 ----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
                + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V  
Sbjct: 993  MVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVRG 1050

Query: 1126 GDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HR
Sbjct: 1051 NLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHR 1110

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVED 1232
            IGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+ED
Sbjct: 1111 IGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIED 1170

Query: 1233 ILRWGT 1238
            +LR G 
Sbjct: 1171 LLRKGA 1176


>gi|328802689|ref|NP_001179063.1| chromodomain-helicase-DNA-binding protein 8 [Bos taurus]
          Length = 2303

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 373/667 (55%), Gaps = 63/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL    +  +KL+ +K K         ++       + + 
Sbjct: 388  EFFVKYKNYSYLHCEWATISQLAKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 447

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 448  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 507

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 508  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 551

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 552  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 609

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 610  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 668

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 669  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 728

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 729  DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 788

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 789  NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 847

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 848  AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 905

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 906  GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 965

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 966  RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1025

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1026 DLLRKGA 1032


>gi|58271342|ref|XP_572827.1| transcription regulator [Cryptococcus neoformans var. neoformans
            JEC21]
 gi|57229086|gb|AAW45520.1| transcription regulator, putative [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1519

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/704 (38%), Positives = 383/704 (54%), Gaps = 84/704 (11%)

Query: 614  FLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKYGTTVINICDERWKQPQ------- 665
            F +KW   S+IHN+    + LK     +K+ENY  K  T      D+R+  P+       
Sbjct: 286  FHIKWKDYSHIHNTDETYAFLKNYKGFKKVENYITKVWT-----IDQRYHHPEPDAAWKP 340

Query: 666  --------------------------RVISLRSSKDGTREA---FVKWTGLPYDECTWEK 696
                                      RV+  +  K     A   FVKWT L Y +CTWE 
Sbjct: 341  TQEEMEQYEIDKERIKELQESYKIVERVLDEKEEKRKEGRATLFFVKWTNLQYSDCTWET 400

Query: 697  LDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK-GGA 755
             ++  + +     +   +F ++  +       +  G  +  +     + E P  L  GGA
Sbjct: 401  YED--VMECQGAKEGIEEFHQRQARTTIPARSISYGIDN--RPTYQKIPENPPYLACGGA 456

Query: 756  LFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLS 815
            L P QL  LNWL   W K +N ILADEMGLGKTV + +F+S L+       P LV+VPLS
Sbjct: 457  LKPFQLTGLNWLAYVWSKGENGILADEMGLGKTVQSVSFLSYLFHVQHQYGPFLVVVPLS 516

Query: 816  TMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTY 875
            T+  W A+F  WAP LNV+ Y G A++R +IRQ+E+             + KFNVLLTTY
Sbjct: 517  TISAWQAQFKRWAPELNVICYMGSARSRDVIRQFEFGP---------LKNLKFNVLLTTY 567

Query: 876  EMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEM 935
            E IL D   L+ + W+VL VDE HRLKN  S+L+  L SF    ++L+TGTPLQNN+ E+
Sbjct: 568  EFILKDRQDLQQIKWQVLAVDEAHRLKNHESQLYEALKSFWSASKLLITGTPLQNNVKEL 627

Query: 936  YNLLNFLQPASFPSLSSFEEKFNDLTTTQ--KVEELKKLVAPHMLRRLKKDAMQNIPPKT 993
              L++FL P  F   + F+   ND +  Q  K+++L   +   MLRRLKKD ++ +P K+
Sbjct: 628  LALMHFLMPEKFQLANDFD--LNDASEDQGAKIKDLHDKLTTLMLRRLKKDVVKELPTKS 685

Query: 994  ERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE 1053
            ER++ VE+S++Q  YY+ +LTKN+ +L     G  Q S++N+ M+L+K  NHPYL  G E
Sbjct: 686  ERILRVEMSAMQTHYYKNILTKNFAVLSK--GGTQQVSLMNVAMELKKASNHPYLFEGAE 743

Query: 1054 PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
              S     +    +  S K+  L  +L  L  +GHRVLIFSQM +LLDI+ DY+      
Sbjct: 744  DRSKPANEILRGLVMNSGKMVCLDMLLSRLKSDGHRVLIFSQMVRLLDIISDYMTAR--G 801

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              ++R+DG+V    R+ +I  FN   S  F FLLSTR+ GLGINL TADTVII+DSD+NP
Sbjct: 802  YVHQRLDGTVPSDVRKKSIEHFNAPGSPDFAFLLSTRAGGLGINLETADTVIIFDSDYNP 861

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG------- 1225
              D+QAM RAHRIGQ + + ++RLV + ++EE IL+ A +K++L+   +NK         
Sbjct: 862  QNDLQAMARAHRIGQQRHVSIFRLVSKGTIEEDILERAMRKMLLEYAIINKMDTTGAHIN 921

Query: 1226 ------------SQKEVEDILRWGTEELFNDSPGINGKDMGENN 1257
                        S++E+  IL++G   +F        K + E N
Sbjct: 922  GSSTPKDKNVDLSKEELSAILKFGARNMFKTDDSTQNKKLDEMN 965


>gi|363738135|ref|XP_414088.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 9 [Gallus gallus]
          Length = 2875

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 265/668 (39%), Positives = 375/668 (56%), Gaps = 66/668 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 712  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 771

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQF 715
                  +SL   KD         VKW  LPY++ TWE    +D+  +E++  L       
Sbjct: 772  VDRVLEVSLCEDKDTGEPVVYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQL------- 824

Query: 716  ERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSK 775
              Q  + D+   + P        +    +    E   G  L  +QLE LNWL   W+  +
Sbjct: 825  --QASRPDSRRLDRP------PPNSWKKIEHSREYKNGNQLREYQLEGLNWLLFNWYNRR 876

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  +LNVV 
Sbjct: 877  NCILADEMGLGKTIQSITFLYEILLS-GIRGPFLIIAPLSTITNWEREFRTWT-DLNVVV 934

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++
Sbjct: 935  YHGSMISRQMIQQYEMYFRDSQGRIVR-GTYRFQAIITTFEMILGGCPELNAIEWRCVII 993

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FP+ S+F +
Sbjct: 994  DEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQ 1053

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
            +F DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1054 EFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEK 1113

Query: 1016 NYQILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFL 1062
            N+  L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F 
Sbjct: 1114 NFAFL---SKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNPTAPDFH 1170

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
             +  I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG 
Sbjct: 1171 LQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGR 1228

Query: 1123 VSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R
Sbjct: 1229 VRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQAR 1288

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSG-----SQKE 1229
             HRIGQ+K + VYRL+ R S E  +   A  KL LD+  +       N  G     S+KE
Sbjct: 1289 CHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKKE 1348

Query: 1230 VEDILRWG 1237
            +ED+LR G
Sbjct: 1349 IEDLLRRG 1356


>gi|431898743|gb|ELK07120.1| Chromodomain-helicase-DNA-binding protein 8 [Pteropus alecto]
          Length = 2582

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 373/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 667  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 726

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 727  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELK 786

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    +  +  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 787  RVNRPQANAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 830

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+  +Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 831  NCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 888

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 889  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 947

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 948  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1007

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1008 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1067

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1068 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1126

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1127 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1184

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1185 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1244

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1245 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1304

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1305 DLLRKG 1310


>gi|154315192|ref|XP_001556919.1| hypothetical protein BC1G_04635 [Botryotinia fuckeliana B05.10]
          Length = 1357

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 375/667 (56%), Gaps = 64/667 (9%)

Query: 612  YEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAK------YGTTVINIC---DERW 661
            +E+ +KW GKS+ H +W   S L  V   R+LENY  K      Y T    I     E+W
Sbjct: 305  FEYYIKWQGKSHCHATWETTSSLAGVRGFRRLENYYRKIVIDDIYMTQGAEIPPEEKEKW 364

Query: 662  K--------------QPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
                           + +RVI  R   + T E F+KW  L Y+ CTWE     + EK   
Sbjct: 365  MLDRERDADALEDYIKVERVIGSREGDEET-EYFIKWKALYYESCTWETASFIS-EKAQD 422

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
              D F+    ++L  D  E           +S  V + EQP+ +  G L   Q+  LN+L
Sbjct: 423  AIDHFLDRSSRSLVSDRKE------SNPDTRSPHVPIREQPDYIMNGQLRDFQITGLNFL 476

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K+KNVILADEMGLGKTV   AF++ L+ +   + P LV+VPL+T+P W   F  W
Sbjct: 477  AYNWCKNKNVILADEMGLGKTVQTVAFMNWLHNDRGQEGPHLVVVPLTTIPAWADTFDNW 536

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            AP+LN V Y+G   +R IIR+YE        ++      KFNVLLT+YE ILADS  L  
Sbjct: 537  APSLNYVVYNGKESSRQIIREYELL------VDGNPKRPKFNVLLTSYEYILADSLFLSQ 590

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W+ + VDE HRLKN  S+L+  L  F    R+L+TGTP+QN +GE+  L++FL P   
Sbjct: 591  IKWQFMAVDEAHRLKNRESQLYLKLLDFKAPSRLLITGTPVQNTLGELSALMDFLMPGEL 650

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
                + +    D    +K+  L   + P++LRR K+    ++PPK+E+++ VELS +Q +
Sbjct: 651  EIEDNMD--LTDEAAGEKIAALTTKIQPYILRRTKQKVENDLPPKSEKIIRVELSDVQLD 708

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFLHEM 1065
            YY+ +LT+NY  L    KG  +QS+LNI+M+L+K  NHPY+ P  E     GS     ++
Sbjct: 709  YYKNILTRNYAALNEGSKG-PKQSLLNIMMELKKASNHPYMFPNAEEKILKGSERRDDQL 767

Query: 1066 R--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
            +  I +S K+ LL  +L  L K+ HRVLIFSQM K+LDIL DYL +      ++R+DG+V
Sbjct: 768  KGLIASSGKMMLLDRLLAKLKKDNHRVLIFSQMVKMLDILGDYLQLR--GYQFQRLDGTV 825

Query: 1124 SVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
            + G R+ AI  FN D S  F FLLSTR+ GLGINL TADTV+I+DSD+NP AD+QAM RA
Sbjct: 826  AAGPRRQAIDHFNADGSNDFCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARA 885

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD----------------QLFVNKSGS 1226
            HRIGQ K  +  +  V    ++ + + A K   +D                Q    +SG+
Sbjct: 886  HRIGQKKPFITIQRGVTDKEKKELREKAAKAGKIDDPKSSEDISRILKKRGQKMFEQSGN 945

Query: 1227 QKEVEDI 1233
            QK++E++
Sbjct: 946  QKKLEEL 952


>gi|291240565|ref|XP_002740192.1| PREDICTED: Chromodomain-helicase-DNA-binding protein 1-like
            [Saccoglossus kowalevskii]
          Length = 938

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 257/610 (42%), Positives = 364/610 (59%), Gaps = 58/610 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKA--------KYGTTVINI----C 657
            ++L+KW   ++IHN+W  E  L+  A +   KL+NYK         K  TT  ++    C
Sbjct: 348  QYLIKWKNWAHIHNTWETEESLRTQAVKGLKKLDNYKQREEELGLWKTMTTPEDVEYYEC 407

Query: 658  DE--------RWKQPQRVIS----LRSSKD---GTREAFVKWTGLPYDECTWEKLDEPAL 702
             +        ++++ +R+I     +R  ++   G  +   KW GLPY ECTWE  +  + 
Sbjct: 408  QQEMALQLYGQYQEVERIIGKPTLIRKQQEVNSGQPDFLCKWKGLPYCECTWEDGELVSR 467

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA----LFP 758
               + + + F++     +    S       K   Q+   VAL  QP  L GGA    L  
Sbjct: 468  NSQTAIDNYFIRLRSSKVPSKIS-------KVLKQKQRFVALKSQPSFL-GGADKMELRD 519

Query: 759  HQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMP 818
            +QL+ LNWL   W K   VILADEMGLGKT+ A AF+S L+  ++   P L++VPLSTM 
Sbjct: 520  YQLDGLNWLLHSWCKENGVILADEMGLGKTIQAIAFLSYLFNTYQLYGPFLLVVPLSTMT 579

Query: 819  NWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI 878
             W  EF +WAP+LNVV Y G   +R  IR+YEW  +         S  +FN L+TTYE++
Sbjct: 580  AWQREFEIWAPDLNVVVYIGDLVSRNKIREYEWCFAG------NRSRLRFNALITTYEIL 633

Query: 879  LADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNL 938
            L D S L  V W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++L
Sbjct: 634  LKDKSFLNSVNWSNLIVDEAHRLKNDDSLLYKTLMDFHTHHRLLITGTPLQNSLKELWSL 693

Query: 939  LNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            L+F+ P  F S   FE++   +        L K++ P +LRR+KKD  +++P K E+++ 
Sbjct: 694  LHFIMPVKFDSWEQFEKE--HMADQNGYTSLHKVLEPFLLRRVKKDVEKSLPAKVEQILR 751

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGS 1058
            VE+S+ Q +YY+ +LTKNY+ L    KG      LNI+M+L+K+CNHPYLI    P+   
Sbjct: 752  VEMSAKQKQYYKWILTKNYKALSKGLKGNL-SGFLNIMMELKKLCNHPYLI---RPEDNG 807

Query: 1059 VEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
            +  L  + I+ S K+ LL  +L  L++ GHRVLIFSQM ++LDIL DYL+++  P  ++R
Sbjct: 808  ITDLENL-IRTSGKVHLLDKLLTRLHETGHRVLIFSQMVRMLDILADYLSMKHWP--FQR 864

Query: 1119 VDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQ 1177
            +DGS+S   R+ A+  FN + S  F FLLSTR+ GLGINLATADTVII+DSD+NP  D+Q
Sbjct: 865  LDGSISSEVRKQALDHFNAEGSMDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ 924

Query: 1178 AMNRAHRIGQ 1187
            A  RAHRIGQ
Sbjct: 925  AQARAHRIGQ 934


>gi|302414008|ref|XP_003004836.1| chromodomain helicase hrp3 [Verticillium albo-atrum VaMs.102]
 gi|261355905|gb|EEY18333.1| chromodomain helicase hrp3 [Verticillium albo-atrum VaMs.102]
          Length = 1326

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/571 (42%), Positives = 357/571 (62%), Gaps = 30/571 (5%)

Query: 659  ERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
            E + +  RV+++R   + T E  VKW G  YDECTWE     + + +    D F+    +
Sbjct: 276  EDYTKVDRVVAVRDGDEET-EYLVKWKGCYYDECTWEVASAISTD-FQVKIDQFLDRSSR 333

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
                D +E           ++ +  L  QP+ +KGG L   QL  LN+L   W ++ NVI
Sbjct: 334  QWVSDRTE------TNPDTRTRMTKLEAQPDYIKGGELRTFQLRGLNFLCLNWTRANNVI 387

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKTV + +F+S L  + + + P L++ PLS +P W   F  W+P++N V Y G
Sbjct: 388  LADEMGLGKTVQSVSFMSWLRNDREQEGPFLIVAPLSVIPAWGDTFDNWSPDMNYVVYLG 447

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R  IR+ E        +N  +   KFN L+T+YEMIL D S L+ + W+ L+VDE 
Sbjct: 448  NEASRQTIRENELM------INGNSKKPKFNALITSYEMILHDWSFLQTIKWQALLVDEA 501

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN  S+L++ L SF    ++L+TGTP+QNN+ E+  L++FL P         +E+  
Sbjct: 502  HRLKNKESQLYAKLVSFGVPCKILITGTPIQNNLAELSALMDFLNPGKV----IIDEELE 557

Query: 959  DLT---TTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             LT   T +K+++L   +AP++LRR K+    ++PPKTE+++ VELS +Q EYY+ +LT+
Sbjct: 558  TLTGADTQEKLQDLHTSIAPYILRRTKETVESDLPPKTEKIIRVELSDVQLEYYKNILTR 617

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFLHEMR--IKASA 1071
            NY  L +      + S+LNI+M+L+KV NHPY+  G E    +GS     +++  I +S 
Sbjct: 618  NYAALSDATG--QKNSLLNIMMELKKVSNHPYMFGGAEDRVLAGSTRREDQVKGLIASSG 675

Query: 1072 KLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAA 1131
            K+ LL  +L  L K+GHRVLIFSQM K+LDIL DYL +  G K ++R+DG+++ G R+ A
Sbjct: 676  KMMLLDQLLTKLKKDGHRVLIFSQMVKMLDILGDYLALR-GYK-FQRLDGTIAAGPRRMA 733

Query: 1132 ITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKR 1190
            I  FN + S  F FLLSTR+ GLGINL TADTV+I+DSD+NP AD+QAM RAHRIGQ K 
Sbjct: 734  INHFNAEGSDDFCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMGRAHRIGQKKP 793

Query: 1191 LLVYRLVVRASVEERILQLAKKKLMLDQLFV 1221
            + +YRLV + +VEE +L+ A+ KL+L+ L +
Sbjct: 794  VSIYRLVSKETVEEEVLERARNKLLLEYLTI 824


>gi|410983505|ref|XP_003998079.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 9 [Felis catus]
          Length = 2885

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 373/666 (56%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 717  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 776

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 777  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 830

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        + I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 831  ASRPDTRHLDRP-------PANIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 883

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 884  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 941

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 942  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 1000

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 1001 AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1060

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1061 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1120

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1121 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1177

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1178 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1235

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1236 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1295

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1296 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1355

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1356 DLLRRG 1361


>gi|196002339|ref|XP_002111037.1| hypothetical protein TRIADDRAFT_54568 [Trichoplax adhaerens]
 gi|190586988|gb|EDV27041.1| hypothetical protein TRIADDRAFT_54568 [Trichoplax adhaerens]
          Length = 1562

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 278/729 (38%), Positives = 409/729 (56%), Gaps = 92/729 (12%)

Query: 581  DVGKKTSGSVAK-RVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLK---V 636
            D G  T+    K R   P  TE+          ++LVK+   +NIHN+W  E  LK   V
Sbjct: 218  DTGANTTWYALKDRDHTP--TEANPTDDDQTEIQYLVKFKDWANIHNTWESERSLKEQNV 275

Query: 637  LAKRKLENYKAK-----------------YGTTVINICDE---RWKQPQRVISLRSSKD- 675
               +KL NY  +                 Y      + DE   ++ Q +RVI+ R  K  
Sbjct: 276  RGLKKLNNYIKREKEIDEWKQMVSPEDLEYFECQRQMIDELFSQYTQVERVIACRLIKQM 335

Query: 676  ---GTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRG 732
                T +  VKW GLPY +CTWE  D         L +       Q   K     ++P  
Sbjct: 336  TGGSTADYLVKWQGLPYADCTWEDGD---------LINRHFPNTIQAYYKRQENIKIP-- 384

Query: 733  KGDCQ----QSEIVALTEQPEELKGGA--LFPHQLEALNWLRKCWHKSKNVILADEMGLG 786
              +C+    + + V L  QP+ +      L  +QL++LNW+   W K  ++ILADEMGLG
Sbjct: 385  DKNCKVLRNRPKFVLLKSQPDYVGNSTHQLRDYQLDSLNWMIHAWCKENSIILADEMGLG 444

Query: 787  KTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAII 846
            KT+   +F+S LY         L++VPLSTM +W  EF LWAP++NVV Y G  K+R +I
Sbjct: 445  KTIQVISFLSYLYHSHSLYGIFLLVVPLSTMTSWQREFELWAPDINVVVYLGDTKSRRMI 504

Query: 847  RQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGS 906
            R Y+W+     N NK+   +KFN LLTTYE++L D   L+   W  L VDE HRLKN  S
Sbjct: 505  RDYDWY-----NSNKR---FKFNALLTTYEIVLKDKDILKSFKWACLAVDEAHRLKNDDS 556

Query: 907  KLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKV 966
             L+  L  F   HR+L+TGTPLQN++ E+++LL+F+    + S   F++ F     +  +
Sbjct: 557  LLYRYLMEFKTDHRLLITGTPLQNSLKELWSLLHFIMEKRYDSWEKFKDSFMKDDGSSYM 616

Query: 967  EELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKG 1026
              L + + P++LRR+KKD  +++P K E+++ VE+++IQ +YYR ++T+NY+ L    KG
Sbjct: 617  -SLHQELQPYILRRVKKDVEKSLPAKVEQILRVEMTAIQKQYYRWIITRNYKALSKGAKG 675

Query: 1027 VAQQSMLNIVMQLRKVCNHPYLIPGTEPDS-GSVEFLHEMRIKASAKLTLLHSMLKVLYK 1085
             +    +NI+M+L+K CNH  L+   E ++  +++ L    ++ S K+ LL  +L  L +
Sbjct: 676  -SLGGFINIMMELKKCCNHASLVKMEEKNNKDAIQSL----LRGSGKMILLDKLLCRLKE 730

Query: 1086 EGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVF 1144
             GHRVLIFSQM ++LDIL +YL I+     ++R+DGS+    R+ A+  FN D S+ F F
Sbjct: 731  TGHRVLIFSQMVRMLDILAEYLQIKHF--LFQRLDGSIRGDLRKQALDHFNADGSQDFCF 788

Query: 1145 LLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEE 1204
            LLSTR+ GLG+NLA+ADTVII+DSD+NP  DIQA +RAHRIGQ K         + SVEE
Sbjct: 789  LLSTRAGGLGLNLASADTVIIFDSDWNPQNDIQAQSRAHRIGQRK---------QNSVEE 839

Query: 1205 RILQLAKKKLMLDQLFVNK---SG---------------SQKEVEDILRWGTEELFNDSP 1246
             I++ A KK++LD L + +   SG               +++EV+ IL++G EELF ++ 
Sbjct: 840  EIIERATKKMVLDHLVIQRMDTSGRTVLSKSSAPSSANFTKEEVDVILKFGVEELFKETD 899

Query: 1247 GINGKDMGE 1255
            G   K + E
Sbjct: 900  GEQDKKLQE 908


>gi|49476336|gb|AAT66509.1| KISH2 [Homo sapiens]
          Length = 2881

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/666 (40%), Positives = 373/666 (56%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRRLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---FKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1354 DLLRRG 1359


>gi|426242346|ref|XP_004015034.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 2
            [Ovis aries]
          Length = 2883

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 372/667 (55%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 716  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 775

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 776  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 829

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P          I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 830  ASRPDTRHLDRP-------PPNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 882

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 883  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 940

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 941  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 999

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 1000 AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1059

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1060 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1119

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1120 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1176

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1177 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1234

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1235 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1294

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1295 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1354

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1355 DLLRRGA 1361


>gi|281346617|gb|EFB22201.1| hypothetical protein PANDA_000001 [Ailuropoda melanoleuca]
          Length = 2901

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 373/667 (55%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 717  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 776

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 777  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 830

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        + I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 831  ASRPDTRHLDRP-------PANIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 883

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 884  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 941

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 942  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 1000

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 1001 AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1060

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1061 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1120

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1121 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1177

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1178 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1235

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1236 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1295

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1296 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1355

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1356 DLLRRGA 1362


>gi|383850784|ref|XP_003700954.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
            [Megachile rotundata]
          Length = 1797

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 270/687 (39%), Positives = 399/687 (58%), Gaps = 81/687 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK----------YGTTVINICD- 658
            ++L+KW G S+IHN+W  E  LK   V   +KL+N+  K           G   I+  + 
Sbjct: 283  QYLIKWKGWSHIHNTWESEESLKAQKVKGLKKLDNFIKKEREIKQWRDCAGPEDIDYFEC 342

Query: 659  ---------ERWKQPQRVISLRSSKDGTR-EAFVKWTGLPYDECTWEKLDEPAL--EKYS 706
                     + +   +R+I+  +  D    + + KW  LPY E TWE   + AL  +K+ 
Sbjct: 343  QLELQQDLLKSYNNVERIIAEYNKPDSEHPDYYCKWESLPYAEATWE---DGALIVKKWP 399

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG---ALFPH 759
                 F   ER+  K+  S+         C+    + +   L  QP+ +  G    L  +
Sbjct: 400  EKIKEFR--EREDSKRTPSKH--------CKVLKSRPKFHQLKGQPDYMGKGRDLTLRDY 449

Query: 760  QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPN 819
            Q++ LNW+   W K  +VILADEMGLGKT+    F+  L+   +   P L++VPLSTM +
Sbjct: 450  QMDGLNWMIHSWCKENSVILADEMGLGKTIQTICFLYYLFHTHQLYGPFLLVVPLSTMTS 509

Query: 820  WLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMIL 879
            W  E + WAP++N V Y G   +R +IR+YEW  S        +   KFN +LTTYE++L
Sbjct: 510  WQREMSQWAPDMNFVTYLGDVTSRNVIREYEWCYS--------SKRLKFNAILTTYEIVL 561

Query: 880  ADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLL 939
             D + L  + W VL+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL
Sbjct: 562  KDKAFLGALNWAVLLVDEAHRLKNDDSLLYKALAEFHTNHRLLITGTPLQNSLKELWALL 621

Query: 940  NFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPV 999
            +F+ PA F S   FE K +D    +   +L K + P +LRR+KKD  +++P K E+++ V
Sbjct: 622  HFIMPAKFASWEEFE-KEHDNAAQKGYSKLHKQLEPFILRRVKKDVEKSLPAKVEQILRV 680

Query: 1000 ELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SG 1057
            E++S+Q +YY+ +LTKNY  LR   KG +  + LNIV++L+K CNH +L   TE +    
Sbjct: 681  EMTSLQKQYYKWILTKNYNALRKGVKG-STMTFLNIVIELKKCCNHAFLTKPTENEKKES 739

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
            + ++L ++ I+ S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL     P  ++
Sbjct: 740  NEDYLQQL-IRGSGKLVLLDKLLVRLRETGHRVLIFSQMVRMLDILGEYLQKRHFP--FQ 796

Query: 1118 RVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DGS+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+
Sbjct: 797  RLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL 856

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------------- 1221
            QA  RAHRIGQ  ++ +YRLV + SVEE I++ AK+K++LD L +               
Sbjct: 857  QAQARAHRIGQKNQVNIYRLVTKNSVEEEIVERAKQKMVLDHLVIQRMDTTGRTVLDKKN 916

Query: 1222 ----NKSGSQKEVEDILRWGTEELFND 1244
                N   +++++  IL++G E+LF D
Sbjct: 917  AGTNNNPFNKEDLNAILKFGAEDLFKD 943


>gi|71891786|dbj|BAA20767.3| KIAA0308 [Homo sapiens]
          Length = 2759

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/666 (40%), Positives = 373/666 (56%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 592  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 651

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 652  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 705

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 706  ASRPDTRCLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 758

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 759  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 816

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 817  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 875

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 876  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 935

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 936  GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 995

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 996  SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1052

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1053 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1110

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1111 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1170

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1171 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1230

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1231 DLLRRG 1236


>gi|440910037|gb|ELR59871.1| Chromodomain-helicase-DNA-binding protein 9 [Bos grunniens mutus]
          Length = 2906

 Score =  445 bits (1144), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 372/666 (55%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 716  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 775

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 776  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 829

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P          I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 830  ASRPDTRHLDRP-------PPNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 882

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 883  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 940

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 941  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 999

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 1000 AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1059

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1060 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1119

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1120 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1176

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1177 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1234

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1235 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1294

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1295 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1354

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1355 DLLRRG 1360


>gi|329663886|ref|NP_001192579.1| chromodomain-helicase-DNA-binding protein 9 [Bos taurus]
 gi|296478067|tpg|DAA20182.1| TPA: kismet-like [Bos taurus]
          Length = 2883

 Score =  445 bits (1144), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 372/666 (55%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 716  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 775

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 776  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 829

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P          I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 830  ASRPDTRHLDRP-------PPNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 882

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 883  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 940

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 941  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 999

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 1000 AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1059

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1060 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1119

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1120 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1176

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1177 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1234

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1235 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1294

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1295 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1354

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1355 DLLRRG 1360


>gi|296231077|ref|XP_002807783.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 9-like [Callithrix jacchus]
          Length = 2896

 Score =  445 bits (1144), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 268/667 (40%), Positives = 373/667 (55%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRCLDRP-------PSNIWNKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1354 DLLRRGA 1360


>gi|426242344|ref|XP_004015033.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
            [Ovis aries]
          Length = 2899

 Score =  445 bits (1144), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 372/667 (55%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 716  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 775

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 776  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 829

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P          I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 830  ASRPDTRHLDRP-------PPNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 882

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 883  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 940

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 941  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 999

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 1000 AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1059

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1060 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1119

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1120 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1176

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1177 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1234

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1235 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1294

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1295 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1354

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1355 DLLRRGA 1361


>gi|431914122|gb|ELK15381.1| Chromodomain-helicase-DNA-binding protein 9 [Pteropus alecto]
          Length = 2885

 Score =  444 bits (1143), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 374/667 (56%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 717  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 776

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 777  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 830

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 831  ASRPDTRHLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 883

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 884  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 941

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I++YE +  D    +    +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 942  GSLISRQMIQRYEMYFRDSQG-HIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 1000

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 1001 AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1060

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1061 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1120

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1121 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1177

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1178 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1235

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1236 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1295

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+ +  + SG           S+KE+E
Sbjct: 1296 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESHVGGIQQLSKKEIE 1355

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1356 DLLRRGA 1362


>gi|417407024|gb|JAA50147.1| Putative chromatin remodeling complex wstf-iswi small subunit
            [Desmodus rotundus]
          Length = 2606

 Score =  444 bits (1143), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/667 (40%), Positives = 374/667 (56%), Gaps = 62/667 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 738  EFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRSHFFADMEEEPFNPDYVE 797

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 798  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 851

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S +    +Q  E K    L  +QLE LNWL   W+  +N 
Sbjct: 852  ASRPDTRHLDRP-------PSNLWKKIDQSREYKNCNQLREYQLEGLNWLLFNWYNRRNC 904

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 905  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 962

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I++YE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 963  GSLISRQMIQRYEMYFRDAQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 1021

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 1022 AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1081

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1082 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1141

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KGV Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1142 SFL---AKGVGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNPAASDFHLQ 1198

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1199 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHK--RYLYERIDGRVR 1256

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1257 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1316

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG-----------SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+ +  + SG           S+KE+E
Sbjct: 1317 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1376

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1377 DLLRRGA 1383


>gi|126277336|ref|XP_001368949.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Monodelphis
            domestica]
          Length = 2591

 Score =  444 bits (1143), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 373/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 666  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 725

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 726  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKVREFKRIQSRHPELK 785

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 786  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 829

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+   Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 830  NCILADEMGLGKTIQSIAFLQEEY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 887

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 888  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 946

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 947  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1006

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1007 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1066

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1067 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1125

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1126 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1183

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1184 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1243

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1244 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1303

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1304 DLLRKG 1309


>gi|417406687|gb|JAA49990.1| Putative chromatin remodeling complex swi/snf component swi2
            [Desmodus rotundus]
          Length = 1710

 Score =  444 bits (1143), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 396/682 (58%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 316  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 375

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 376  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 432

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 433  QARIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHESLELRDYQLN 486

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 487  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 546

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 547  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 599

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 600  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 659

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 660  MPEKFSSWEEFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 718

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 719  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 777

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 778  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 834

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 835  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 894

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 895  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 954

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 955  SSTPFNKEELSAILKFGAEELF 976


>gi|308497953|ref|XP_003111163.1| CRE-TAG-192 protein [Caenorhabditis remanei]
 gi|308240711|gb|EFO84663.1| CRE-TAG-192 protein [Caenorhabditis remanei]
          Length = 2998

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 269/697 (38%), Positives = 404/697 (57%), Gaps = 64/697 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDERWKQP----Q 665
            +FL+KW G++  H  W    +L  + KR   K++ +KAK   + I   DE +        
Sbjct: 1069 QFLIKWKGRAYCHCEWKTFPELLEIDKRVEAKIKRFKAKKLVSYIE-DDEDFNSDFVIVD 1127

Query: 666  RVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDAS 725
            RV+ + +  DG     +KW  L Y+E TWE ++    +K        V+  RQ    D +
Sbjct: 1128 RVVDMITEDDGQEFVLIKWKSLGYEEVTWEPIENIPEDK--------VELWRQRQVIDPA 1179

Query: 726  EDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHK----SKNVILAD 781
            +    R K   + +E   ++       G +L  +Q E ++WL  C++     S+N ILAD
Sbjct: 1180 KV---RDKNRPEPNEWKNMSTLKVWKNGNSLREYQFEGVDWLLYCYYNYLYFSQNCILAD 1236

Query: 782  EMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAK 841
            EMGLGKTV    F+S +Y ++    P LV+VPLST+ NW+ EF  W  ++N + YHG A 
Sbjct: 1237 EMGLGKTVQTITFLSQIY-DYGIHGPFLVVVPLSTIQNWVREFETWT-DMNAIVYHGSAH 1294

Query: 842  ARAIIRQYE--WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
            AR +++QYE  +      + N K +  K + L+TT+E +++D   L+ +PW V V+DE H
Sbjct: 1295 AREVLQQYEVFYDKRHSGSKNWKKNFVKIDALITTFETVVSDVEFLKKIPWRVCVIDEAH 1354

Query: 900  RLKNSGSKLF-SLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            RLKN   KL  + L +F  +HRVLLTGTPLQNNI E+++LLNFL P  F + ++F E+F 
Sbjct: 1355 RLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQNNIEELFSLLNFLHPQQFDNSANFLEQFG 1414

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
               T  +V++L++++ P MLRRLK+D  +++ PK E ++ V+LS +Q ++YRA+L +N+ 
Sbjct: 1415 SCQTDDQVQKLQEILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAILERNFS 1474

Query: 1019 ILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE-----------PDSGSVEFLHEMRI 1067
               ++ KG +  S++N++M+LRK CNHP+LI G E           PD        +  +
Sbjct: 1475 ---HLCKGTSAPSLMNVMMELRKCCNHPFLINGAEETIMNDFRLAHPDWDDETLAQKALV 1531

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
            +AS K+ L+  +L  L K+GH+VLIFSQM K+LD+LE++L     P  +ER+DG+V    
Sbjct: 1532 QASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLITMSYP--FERIDGNVRGDL 1589

Query: 1128 RQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI RF+++ S RFVFLL TR+ GLGINL  ADTVII+DSD+NP  D+QA  R HRIG
Sbjct: 1590 RQAAIDRFSKENSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIG 1649

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG---------SQKEVEDILRWG 1237
            Q K + VYRL+   + E  +   A  KL LD+  +  +          S+K+VE++L+  
Sbjct: 1650 QKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTALKAEGTALSKKDVEELLK-- 1707

Query: 1238 TEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKR 1274
                     G  G  M E N S +    D+E   ++R
Sbjct: 1708 --------KGAYGSIMDEENESAKFNEEDIETILQRR 1736


>gi|87130801|gb|ABD24032.1| PRIC320 isoform 1 [Homo sapiens]
          Length = 2881

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 268/666 (40%), Positives = 373/666 (56%), Gaps = 62/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL--KVLAKRKLENYKAKYGTTVINICD--ERWKQPQRV- 667
            EF VK+   S +H  W  E QL      ++K++ +K +         D  E    P  V 
Sbjct: 715  EFFVKYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVE 774

Query: 668  ------ISLRSSKDGTREA---FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQ 718
                  +S    KD         VKW  LPY++ TWE  ++  L K      L      Q
Sbjct: 775  VDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------Q 828

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNV 777
              + D    + P        S I    +Q  + K G  L  +QLE LNWL   W+  +N 
Sbjct: 829  ASRPDTRCLDRP-------PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNC 881

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+  +      + P L++ PLST+ NW  EF  W  ++NVV YH
Sbjct: 882  ILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYH 939

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G   +R +I+QYE +  D      +  +Y+F  ++TT+EMIL     L  + W  +++DE
Sbjct: 940  GSLISRQMIQQYEMYFRDSQGRIIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDE 998

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +H+VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F
Sbjct: 999  AHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEF 1058

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             DL T ++V++L+ ++ P MLRRLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+
Sbjct: 1059 GDLKTEEQVQKLQVILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF 1118

Query: 1018 QILRNIGKGVAQQSMLNIV---MQLRKVCNHPYLIPGTEP----------DSGSVEFLHE 1064
              L    KG  Q ++ N+V   M+LRK CNHPYLI G E           +  + +F  +
Sbjct: 1119 SFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQ 1175

Query: 1065 MRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
              I+++ KL L+  +L  +   GH+VLIFSQM + LDILEDYL  +     YER+DG V 
Sbjct: 1176 AMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVR 1233

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1234 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1293

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQ+K + VYRLV R S E  +   A  KL LD+  +        N  G    S+KE+E
Sbjct: 1294 RIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIE 1353

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1354 DLLRRG 1359


>gi|395502992|ref|XP_003755857.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Sarcophilus
            harrisii]
          Length = 2594

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 373/666 (56%), Gaps = 63/666 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER------WKQP 664
            EF VK+   S +H  W   SQL+   +  +KL+ +K K         ++       + + 
Sbjct: 669  EFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEV 728

Query: 665  QRVISLRSSKDGTR-----EAFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFE 716
             R++    S D           VKW  LPY++ TWE    +DE  + ++  +     + +
Sbjct: 729  DRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKVREFKRIQSRHPELK 788

Query: 717  RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSK 775
            R    + ++  +L                E   E K    L  +QLE +NWL   W+  +
Sbjct: 789  RVNRPQASAWKKL----------------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQ 832

Query: 776  NVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVE 835
            N ILADEMGLGKT+ + AF+   Y       P LV+ PLST+ NW  EF  W   +N + 
Sbjct: 833  NCILADEMGLGKTIQSIAFLQEEY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIV 890

Query: 836  YHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVV 895
            YHG   +R +I+QYE +  D         +YKF+ L+TT+EMIL+D   LR + W  +++
Sbjct: 891  YHGSLASRQMIQQYEMYCKDSRG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVII 949

Query: 896  DEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEE 955
            DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F +
Sbjct: 950  DEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLK 1009

Query: 956  KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTK 1015
             F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L K
Sbjct: 1010 DFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEK 1069

Query: 1016 NYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIK 1068
            N+  L          ++LN +M+LRK CNHPYLI G E +    EF        H+  ++
Sbjct: 1070 NFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQ 1128

Query: 1069 A----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVS 1124
            A    + KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V 
Sbjct: 1129 AMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVR 1186

Query: 1125 VGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
               RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R H
Sbjct: 1187 GNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCH 1246

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG----SQKEVE 1231
            RIGQSK + VYRL+ R S E  +   A  KL LD+  +        N +G    S+KE+E
Sbjct: 1247 RIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIE 1306

Query: 1232 DILRWG 1237
            D+LR G
Sbjct: 1307 DLLRKG 1312


>gi|383850307|ref|XP_003700737.1| PREDICTED: uncharacterized protein LOC100883463 [Megachile rotundata]
          Length = 4199

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 262/664 (39%), Positives = 381/664 (57%), Gaps = 55/664 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL-----KVLAKRKLENYKAKYGTTVINICDERWKQPQ-- 665
            E+ VK+   S +H  W  E +L     ++ AK K    + +  T +    ++    P   
Sbjct: 1487 EYFVKYRNFSYLHCEWRTEEELYKGDKRIQAKLKRFKQRQQQNTNIFENTEDDPFNPDFV 1546

Query: 666  ---RVISLRSSKDGT-----REAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFER 717
               RV+   +  D T     +   VKW  L Y++ TWE  ++   EK +     F++F +
Sbjct: 1547 EVDRVLDEATHTDPTTGETLKHYLVKWRSLQYEDSTWELEEDVDPEKIAQ----FIRFNK 1602

Query: 718  QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNV 777
               K      + P        S  V L E P      +L P+QLE LNWL   W+   N 
Sbjct: 1603 LPPKDQWKPKKKPNA------SAWVKLEESPIYKNNNSLRPYQLEGLNWLLFSWYNGHNC 1656

Query: 778  ILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH 837
            ILADEMGLGKT+ +  F+ ++Y ++  + P L++ PLST+PNW  EF  W  ++NVV YH
Sbjct: 1657 ILADEMGLGKTIQSLTFVDAVY-KYGIRGPFLIIAPLSTIPNWQREFESWT-DMNVVVYH 1714

Query: 838  GCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDE 897
            G A +R ++++YE +  +      K    KFNVL+TT+E+I+ D + LRG  W + V+DE
Sbjct: 1715 GSAASRTMLQEYEVYYKNEKGQQIK-DLIKFNVLITTFEIIITDFNELRGYNWRLCVIDE 1773

Query: 898  GHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 957
             HRLKN   KL   L   + +HRVLL+GTPLQNN+ E+++LLNFL+P  F S  +F ++F
Sbjct: 1774 AHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPVQFSSSEAFLKEF 1833

Query: 958  NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1017
             +L++  +V +L+ L+ P MLRRLK+D  +++ PK E +V VEL++IQ +YYR +L +N+
Sbjct: 1834 GNLSSESEVHKLQLLLKPMMLRRLKEDVEKSLAPKEETVVEVELTNIQKKYYRGILERNF 1893

Query: 1018 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD------SGSVE----FLHEMRI 1067
              L          +++N +M+LRK C HP+L+ G E        +G  E    + H + +
Sbjct: 1894 SFLAKGTTSANIPNLMNTMMELRKCCIHPFLLNGAEDQIQLDYKTGEKEDSEAYYHAL-V 1952

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGD 1127
             +S K+ L+  +L  L   GHRVLIFSQM K LD+LEDYL  +  P  YER+DG +    
Sbjct: 1953 NSSGKMVLIDKLLPKLKASGHRVLIFSQMVKCLDLLEDYLLYKKYP--YERIDGRIRGNL 2010

Query: 1128 RQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIG 1186
            RQAAI R+++ D  RFVFLL T++ GLGINL  ADTVIIYDSD+NP  D+QA  R HRIG
Sbjct: 2011 RQAAIDRYSKPDSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIG 2070

Query: 1187 QSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------------NKSGSQKEVEDI 1233
            Q K + VYRL+ R + E  +   A  KL LD+  +             NK  ++KE+ED+
Sbjct: 2071 QQKMVKVYRLLCRNTYEREMFDKASLKLGLDKAILQSMNTSQGGKDPSNKQLTKKEIEDL 2130

Query: 1234 LRWG 1237
            L+ G
Sbjct: 2131 LKKG 2134


>gi|123477045|ref|XP_001321692.1| SNF2 family N-terminal domain containing protein [Trichomonas
            vaginalis G3]
 gi|121904523|gb|EAY09469.1| SNF2 family N-terminal domain containing protein [Trichomonas
            vaginalis G3]
          Length = 1425

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 264/668 (39%), Positives = 377/668 (56%), Gaps = 58/668 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKV-----LAKRKLENYKAKYGTTVINICDER-------- 660
            +  KW+G++ IH S+  +  LK      LA +K  N    +G T      E         
Sbjct: 105  YFTKWIGRAYIHASYECQEDLKQCDGGDLALKKFNNKLKGFGLTASTSQPELSTFDPDDI 164

Query: 661  ---WKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFER 717
               W +  R+I+  ++K       VKW  LPYD+ TWE   E  L + + + +   + +R
Sbjct: 165  NSGWFEVDRIIAHENNK-----YLVKWGNLPYDQATWES--EEDLPEPNKIDEFIARKDR 217

Query: 718  QTLKKDASEDELPRGKGDCQQSEIVALTEQP-EELKGGALFPHQLEALNWLRKCWHKSKN 776
                    E ++         S++    E P E+ +G  L  +QL+ LNWLR CW+   N
Sbjct: 218  CAPMHTPDEPKI--------DSKLYTKIETPLEDKRGNTLRDYQLQGLNWLRYCWYNHYN 269

Query: 777  VILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEY 836
             ILADEMGLGKTV     +  +      + P LVL PLST+ +W  EF  W+ +LNV+ Y
Sbjct: 270  SILADEMGLGKTVQLVTTLIEVSKASGIRGPYLVLAPLSTLHHWEKEFQNWS-DLNVIVY 328

Query: 837  HGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVD 896
            HGC  A+ +I++YE      +N  + T      V++T YE  ++D    R V W  LV+D
Sbjct: 329  HGCPLAKEVIQRYE--LCKIENGVRDTEKLNCEVVITNYETFMSDFEIFRRVEWRYLVLD 386

Query: 897  EGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEK 956
            EGHRLKN  SK + LL   S++H  LLTGTP+QNN+ E+++LL+ LQP  F  L +F ++
Sbjct: 387  EGHRLKNHQSKCYGLLQQLSYKHCTLLTGTPIQNNVEELWSLLHLLQPELFDDLPAFLQE 446

Query: 957  FNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKN 1016
            F  +   Q ++ L++++ P +LRR K D    I  K E ++ VEL+  Q  +YRA L +N
Sbjct: 447  FGQIDNAQTLQNLQQVIKPFLLRRKKSDVETTIAAKEETIIQVELTRTQKTFYRAFLDEN 506

Query: 1017 YQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLH-----------EM 1065
              +L +     A  S+ N++MQLRKVCNHPYLI G   D+   +F             E+
Sbjct: 507  RDVLLSQITSGALPSLKNLMMQLRKVCNHPYLIKGAT-DTILEQFTKASPENTPKSDIEL 565

Query: 1066 R--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
            +  +++S KL L+  +L  L  +GH+VLIFSQM K+LDILEDY+ I+ G K  ER+DGSV
Sbjct: 566  KALVQSSGKLILIDKLLPKLKADGHKVLIFSQMVKVLDILEDYIAIK-GYKC-ERIDGSV 623

Query: 1124 SVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
            +  DRQAAI RF  D   F+FLL T++ G+GINL  ADTVIIYDSD+NP  DIQA +R H
Sbjct: 624  AENDRQAAIERFGNDPDAFIFLLCTKAGGVGINLTAADTVIIYDSDWNPQNDIQAQSRCH 683

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV-------NKSGSQKEVEDILRW 1236
            RIGQ++++ VYRLV R + E  +L  A KKL LD   +       N     +E++ +LR 
Sbjct: 684  RIGQTQKVKVYRLVTRGTYELDMLDRASKKLGLDHALLDSVEVSNNPKMEAQEIDKLLRR 743

Query: 1237 GTEELFND 1244
            G  ++ ND
Sbjct: 744  GVYDIAND 751


>gi|307172263|gb|EFN63768.1| Chromodomain-helicase-DNA-binding protein 7 [Camponotus floridanus]
          Length = 4304

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 268/682 (39%), Positives = 390/682 (57%), Gaps = 56/682 (8%)

Query: 596  EPAVTESAQVKGKAVSYE-FLVKWVGKSNIHNSWIPESQL-----KVLAKRKLENYKAKY 649
            +PA T   + K + +  E + VK+   S +H  W  E ++     ++ AK K    K + 
Sbjct: 1514 KPADTAVVEAKPQFIEMEEYFVKYRNFSYLHCEWRTEEEMYKGDKRIQAKLKRFKQKQQQ 1573

Query: 650  GTTVINICDERWKQPQRVISLR----------SSKDGTREAFVKWTGLPYDECTWEKLDE 699
             T +    ++    P  V   R           + D  R   VKW  L Y++ TWE  ++
Sbjct: 1574 NTNIFENTEDDPFNPDFVEVDRVLDEATHTDPHTGDTVRHYLVKWRSLQYEDSTWELEED 1633

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPH 759
               EK +     FV+F +   K    E   P+ K +   +  V L E P      +L P+
Sbjct: 1634 VDPEKIAQ----FVKFNKVPPK----EQWKPKKKPNA--AAWVKLEESPIYKNNNSLRPY 1683

Query: 760  QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPN 819
            QLE LNWL   W+   N ILADEMGLGKT+ +  F+ ++Y ++  + P L++ PLST+PN
Sbjct: 1684 QLEGLNWLLFSWYNGHNCILADEMGLGKTIQSLTFVDAVY-KYGIRGPFLIIAPLSTIPN 1742

Query: 820  WLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMIL 879
            W  EF  W  ++NVV YHG A +R ++++YE +  +      K    KFNVL+TT+E+I+
Sbjct: 1743 WQREFESWT-DMNVVVYHGSAASRTMLQEYEVYYKNEKGQQIK-DLVKFNVLITTFEIII 1800

Query: 880  ADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLL 939
             D + LRG  W + V+DE HRLKN   KL   L   + +HRVLL+GTPLQNN+ E+++LL
Sbjct: 1801 TDFNELRGYNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLL 1860

Query: 940  NFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPV 999
            NFL+P  F S  +F ++F +L++  +V +L+ L+ P MLRRLK+D  +++ PK E +V V
Sbjct: 1861 NFLEPQQFSSNEAFLKEFGNLSSEGEVNKLQLLLKPMMLRRLKEDVEKSLAPKEETVVEV 1920

Query: 1000 ELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD---- 1055
            EL++IQ +YYR +L +N+  L          +++N +M+LRK C HP+L+ G E      
Sbjct: 1921 ELTNIQKKYYRGILERNFSFLAKGTTSANIPNLMNTMMELRKCCIHPFLLNGAEDQIQLD 1980

Query: 1056 --SGSVE----FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
              +G  E    + H + + +S K+ L+  +L  L   GHRVLIFSQM K LD+LEDYL  
Sbjct: 1981 YKTGEKEDSEAYYHAL-VNSSGKMVLIDKLLPKLKASGHRVLIFSQMVKCLDLLEDYLLY 2039

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDS 1168
            +  P  YER+DG +    RQAAI R+++ D  RFVFLL T++ GLGINL  ADTVIIYDS
Sbjct: 2040 KKYP--YERIDGRIRGNLRQAAIDRYSKPDSDRFVFLLCTKAGGLGINLTAADTVIIYDS 2097

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------- 1221
            D+NP  D+QA  R HRIGQ K + VYRL+ R + E  +   A  KL LD+  +       
Sbjct: 2098 DWNPQNDLQAQARCHRIGQQKMVKVYRLLCRNTYEREMFDKASLKLGLDKAILQSMNTSQ 2157

Query: 1222 ------NKSGSQKEVEDILRWG 1237
                  NK  ++KE+ED+L+ G
Sbjct: 2158 SGKDPSNKQLTKKEIEDLLKKG 2179


>gi|327299934|ref|XP_003234660.1| chromodomain helicase [Trichophyton rubrum CBS 118892]
 gi|326463554|gb|EGD89007.1| chromodomain helicase [Trichophyton rubrum CBS 118892]
          Length = 1558

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/650 (39%), Positives = 377/650 (58%), Gaps = 55/650 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK----RKLENY-KAKYGTTVINICD--------E 659
            E+  KW G ++ H +W     +  LA     R+L+NY + +    ++ + D        E
Sbjct: 342  EYYTKWQGLAHYHATW---ETVDTLANCRGIRRLDNYIRREIEQEILFMRDPDVIPEERE 398

Query: 660  RW--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKY 705
            +W              KQ +RVI  R   DG  E ++KW  LPYD CTWE   E +L   
Sbjct: 399  KWSLDRERYIEKIDHFKQVERVIGSREV-DGATEYYIKWKRLPYDGCTWE---EGSLISN 454

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALN 765
                 +    +R +    +S  E         +S+   +   P+ ++ G L   Q++ +N
Sbjct: 455  MAQAQIDAYLDRCSHPPISSRAE----SNPATRSKFEPIHTNPDFIQNGQLKEFQIKGVN 510

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            +L   W + +NV+LADEMGLGKTV   AFI+ L    + + P +V+VPLSTMP W   F 
Sbjct: 511  FLAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRQQQGPFIVIVPLSTMPAWSETFD 570

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             W P++N + Y G   AR II+ YE  A    NL +     KFNVLLTTYE +L D+S L
Sbjct: 571  YWTPDVNYIVYSGPEPARRIIKDYELLADG--NLKRP----KFNVLLTTYEYVLQDASFL 624

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
              + W+ + +DE HRLKN  S+L++ L  F    R+L+TGTP+QNN+GE+  L++FL P 
Sbjct: 625  NQIKWQFMAIDEAHRLKNRDSQLYTKLLDFKSSCRLLITGTPVQNNLGELSALMDFLNPG 684

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
                  + +   N    + K+ +L + + P+MLRR K      +PPK+E+++ VELS +Q
Sbjct: 685  VIEIDENMD--LNSEAASAKLADLTQAIQPYMLRRTKSKVESELPPKSEKIIRVELSDVQ 742

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEM 1065
             E Y+ +LTKNY  L + GKG  + S+LNI+M+L+K  NHP++  G E  +G      E 
Sbjct: 743  LELYKNILTKNYDALNHGGKG-PKPSLLNIMMELKKASNHPFMFWGPEEQAGG-STRRED 800

Query: 1066 RIKA----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
            ++KA    S K+ +L  +L  L  +GHRVLIFSQM ++L+IL +Y++       Y+R+DG
Sbjct: 801  QLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYMDARGF--NYQRLDG 858

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            +++ G R+ AI  +N   S  F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QAM 
Sbjct: 859  TIAAGPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMA 918

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEV 1230
            RAHRIGQ+K + VYRLV + +VEE +L+ A+ KL+L+ + + +  +  E 
Sbjct: 919  RAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGVTDNEA 968


>gi|256078496|ref|XP_002575531.1| chromodomain helicase DNA binding protein [Schistosoma mansoni]
 gi|353232296|emb|CCD79651.1| putative chromodomain helicase DNA binding protein [Schistosoma
            mansoni]
          Length = 1825

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/716 (37%), Positives = 402/716 (56%), Gaps = 87/716 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK-------VLAKRKLENYKA-------------KYGTT 652
            +FL+KW   S+IH++W  ES L+       V   +K   Y+A             +    
Sbjct: 300  QFLIKWRNWSHIHSTWETESSLRNPDRGAPVAGMKKFYAYQAIMREKSERLQYVEREELE 359

Query: 653  VINICDERWKQ-------PQRVISL-RSSKDGTREAFVKWTGLPYDECTWEKLDEPALEK 704
             +   +ER +Q        +R+++  R  +  T +  +KW  L Y  CTWE         
Sbjct: 360  TVAYEEERDEQLLQDKMNVERIVAHSRDPETNTFDYLIKWFRLDYRFCTWES-------- 411

Query: 705  YSHLTDLFVQFERQTLKKDASEDELPRGKGDC--QQSEIVALTEQP------EELKGGAL 756
               +  L  +   Q  +   +   LP  K +    + + + L EQP      EEL+   L
Sbjct: 412  -GKVIHLLYESAVQAYETRCNSTTLPNRKCEVLYTRPKFLPLMEQPSYLGRSEELR---L 467

Query: 757  FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLST 816
              +QLE +NWL + W +  +VILADEMGLGKT+    F+S L+ E +   P L++VPLST
Sbjct: 468  RDYQLEGINWLVRAWTRRNSVILADEMGLGKTIQTIGFLSYLFNEHQVYGPFLIVVPLST 527

Query: 817  MPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYE 876
            + +W  E   WAP +N + Y G   +R +IR++EW     +N  ++  S KFNV +TTYE
Sbjct: 528  ISSWQKELQTWAPEMNTIIYTGDHVSRQLIREHEWSTGASNN--RRHQSLKFNVCVTTYE 585

Query: 877  MILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMY 936
            ++L D   L  V W  L VDE HRLKN  S+L+  L +F    R+L+TGTPLQN + E++
Sbjct: 586  ILLKDKGWLSQVNWAFLGVDEAHRLKNDSSQLYKTLKTFETNTRLLVTGTPLQNTMKELW 645

Query: 937  NLLNFLQPASFPSLSSFEEKFN-------DLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
             LL+F+ P  FP    FE+ ++       +   ++    L K + P +LRR+KKD   ++
Sbjct: 646  ALLHFIMPDCFPDWEEFEQTYSVSPDDPANKMNSEAFHNLHKTLKPFLLRRVKKDVESSL 705

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ V+++  QA  YR +L +NY  L  + +G  + S +NIVM+L+K CNH +LI
Sbjct: 706  PEKIEQILRVDMTKEQANIYRLILARNYDGLLKVTRG-HKASFINIVMELKKCCNHAHLI 764

Query: 1050 -PGTEPDSGSVEFLHEMR--IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDY 1106
             P +E D   +     +R  +K S K TLL  +L+ L  +GHRVLIFSQM ++LD++ DY
Sbjct: 765  APPSEVDQQYLTKEDRLRSFLKGSGKGTLLDKLLQRLKSKGHRVLIFSQMVRMLDLIADY 824

Query: 1107 LNIE-FGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVI 1164
            L++  +G   ++R+DGS+    R+ A+  FN +  + F FLLSTR+ GLGINLATADTVI
Sbjct: 825  LSLRGWG---FQRLDGSIRGEVRKQALDHFNCEGSTDFCFLLSTRAGGLGINLATADTVI 881

Query: 1165 IYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN-- 1222
            I+DSD+NP  D+QA  RAHRIGQ+K++ VYR V R SVEE+I++ A +K++LD L +   
Sbjct: 882  IFDSDWNPQNDLQAQARAHRIGQTKQVSVYRFVTRESVEEKIIESATRKMVLDHLVIQRM 941

Query: 1223 -----KSGSQKE------VEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDL 1267
                 +SG + +      + +ILR+G E LF        K   E+ T +E  + D+
Sbjct: 942  DSAGIRSGRRGDTAKGHLLTEILRYGAEGLF--------KQADEDATELEVDIDDI 989


>gi|315053040|ref|XP_003175894.1| chromodomain helicase hrp3 [Arthroderma gypseum CBS 118893]
 gi|311341209|gb|EFR00412.1| chromodomain helicase hrp3 [Arthroderma gypseum CBS 118893]
          Length = 1559

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/653 (39%), Positives = 377/653 (57%), Gaps = 55/653 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK----RKLENY-KAKYGTTVINICD--------E 659
            E+  KW G ++ H SW     +  LA     R+L+NY + +    +I + D        E
Sbjct: 342  EYYTKWQGLAHYHASW---ETVDTLANCRGIRRLDNYIRREIEQEIIFMRDPDVIPEERE 398

Query: 660  RW--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKY 705
            +W              KQ +RVI  R   DG  E ++KW  LPYD CTWE   E +L   
Sbjct: 399  KWSLDRERYIEKIDHFKQVERVIGSREV-DGATEYYIKWKRLPYDGCTWE---EGSLISN 454

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALN 765
                 +    +R +    +S  E         +S+   +   P+ ++ G L   Q++ +N
Sbjct: 455  MAQAQIDAYLDRCSHPPISSRAE----SNPATRSKFEPIHTNPDFIQNGQLKEFQIKGVN 510

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            +L   W + +NV+LADEMGLGKTV   AFI+ L    + + P +V+VPLSTMP W   F 
Sbjct: 511  FLAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRQQQGPFIVIVPLSTMPAWSETFD 570

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             W P++N + Y G   AR II+ YE       NL +     KFNVLLTTYE +L D+S L
Sbjct: 571  YWTPDVNYIVYSGPEPARRIIKDYELLTDG--NLKRP----KFNVLLTTYEYVLQDASFL 624

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
              + W+ + +DE HRLKN  S+L++ L  F    R+L+TGTP+QNN+GE+  L++FL P 
Sbjct: 625  NQIKWQFMAIDEAHRLKNRDSQLYTKLLDFKSSCRLLITGTPVQNNLGELSALMDFLNPG 684

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
                  + +   N    + K+ +L + + P+MLRR K      +PPK+E+++ VELS +Q
Sbjct: 685  VIEIDENMD--LNSEAASAKLADLTQAIQPYMLRRTKSKVESELPPKSEKIIRVELSDVQ 742

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEM 1065
             E Y+ +LTKNY  L + GKG  + S+LNI+M+L+K  NHP++  G E  +G      E 
Sbjct: 743  LELYKNILTKNYDALNHGGKG-PKPSLLNIMMELKKASNHPFMFWGPEDQAGG-STRRED 800

Query: 1066 RIKA----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
            ++KA    S K+ +L  +L  L  +GHRVLIFSQM ++L+IL +Y++       Y+R+DG
Sbjct: 801  QLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYMDARGF--NYQRLDG 858

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            +++ G R+ AI  +N   S  F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QAM 
Sbjct: 859  TIAAGPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMA 918

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDI 1233
            RAHRIGQ+K + VYRLV + +VEE +L+ A+ KL+L+ + + +  +  E   +
Sbjct: 919  RAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGVTDNEANSL 971


>gi|395831556|ref|XP_003788863.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Otolemur
            garnettii]
          Length = 1790

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 274/699 (39%), Positives = 391/699 (55%), Gaps = 88/699 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 306  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 365

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 366  QQELASELIKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 425

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+ +  D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 426  SWE--DEALIGKKFQNCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPTYL 477

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 478  GGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 537

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 538  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 590

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 591  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 650

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 651  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 709

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +LT+NY+ L    +G +    LNIVM+L+K CNH YLI
Sbjct: 710  PAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRG-STSGFLNIVMELKKCCNHCYLI 768

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 769  KPPEENERENGQEILLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 827

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 828  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 885

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS 1226
            DSD+NP  D+QA  RAHRIGQ K++   RL                   LD    +   +
Sbjct: 886  DSDWNPQNDLQAQARAHRIGQKKQVSAERL-------------------LDMALGSNPFN 926

Query: 1227 QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
            ++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 927  KEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 962


>gi|168061453|ref|XP_001782703.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
 gi|162665796|gb|EDQ52468.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
            patens]
          Length = 2113

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 272/681 (39%), Positives = 382/681 (56%), Gaps = 68/681 (9%)

Query: 584  KKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLE 643
            KK  G    R + P++ E    K + + Y  LVKW   S+ H++W+PE  L    K +L 
Sbjct: 697  KKIEGIFGFR-KGPSLAEGEGQKQRKLQY--LVKWCSLSHRHDTWVPEEWLLFADKTRLA 753

Query: 644  NYKAKYGTTVIN---ICDER---WKQPQRVISLRSSKD-----------------GTREA 680
             Y+ K  ++V +   + DER   W Q  R+I+ R+  +                   +E 
Sbjct: 754  TYQRK--SSVGDGEEMSDERRPEWVQIDRIIASRNQDNDCVPSSPVAWEAPGLNSSRKEY 811

Query: 681  FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTL-KKDASEDELPRGKGDCQQS 739
             VKWT + Y+  TWE  +E   E        F+  ER  L +K A  D+         Q 
Sbjct: 812  LVKWTNIEYNGSTWE--EENNHEDMQEAISKFI--ERHNLAEKRACTDQ-------ADQV 860

Query: 740  EIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLY 799
               A+TEQP+ + GG L  +QL+ L WL   + + K+VILADEMGLGKT+ A +FI +L 
Sbjct: 861  IAPAITEQPKYISGGVLHDYQLQGLKWLLSNFQQRKSVILADEMGLGKTIQAVSFIMALK 920

Query: 800  CEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL 859
             E  +  P LV+ P ST+  W  EF  W  +LN V Y G  ++R +IR YE+   +   L
Sbjct: 921  YENLSNKPVLVIGPKSTLVGWEQEFGQWGADLNTVIYQGDKESRTMIRNYEFFTREKIPL 980

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
                    F+VL+T+Y++ + DSS L  + W  ++VDEGHR+KN+ SKL  LL       
Sbjct: 981  --------FDVLVTSYDLAMLDSSLLEKMDWACIIVDEGHRVKNTRSKLGILLRRQKADF 1032

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTT------------QKVE 967
            R+LLTGTP+QN + E++ LL+FL P  FP      ++F+ +               Q+V 
Sbjct: 1033 RLLLTGTPVQNTLTELFALLHFLDPVEFPDPERSAQEFSQVDALSGAGSKGEGGVDQQVS 1092

Query: 968  ELKKLVAPHMLRRLKKDAMQN-IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKG 1026
             L KL+ P MLRRLK D MQ  IP K    V   L+ +Q   Y A+L KNY+ L N G  
Sbjct: 1093 RLHKLLTPRMLRRLKADVMQGMIPGKKYVEVLCALTPLQRHLYGAILKKNYKQL-NRGNT 1151

Query: 1027 VAQQSMLN-IVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYK 1085
              ++  LN I+M L+ VCNHPYL PG EP+ G  + L  + I AS KL +L  +L  L +
Sbjct: 1152 TGKKRSLNFILMDLKMVCNHPYLFPGKEPEHGDADELFRLLITASGKLQVLAKLLPRLKE 1211

Query: 1086 EGHRVLIFSQMTKLLDILEDYL-NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FV 1143
             GHRVL+FSQM  +LDILED+L ++++    + R+DGS     RQ  I  FN   S  F+
Sbjct: 1212 GGHRVLLFSQMKSMLDILEDFLSHLDY---KFCRIDGSTPASGRQKQIADFNSANSDVFI 1268

Query: 1144 FLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVE 1203
            FL+STR+ GLGINL +ADTVIIYD DFNP  D+QA  RAHRIGQ   +LVY+L+ + SVE
Sbjct: 1269 FLISTRAGGLGINLPSADTVIIYDPDFNPFVDLQAQARAHRIGQRNVVLVYQLITKCSVE 1328

Query: 1204 ERILQLAKKKLMLDQLFVNKS 1224
            E+I + +++KL ++ L ++ S
Sbjct: 1329 EKITERSRQKLAMENLVMSSS 1349



 Score = 53.9 bits (128), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 5/94 (5%)

Query: 56  KNEINADRSSTKKKGNDGYYYECVICDLGG---NLLCCD--SCPRTYHLQCLDPPLKRIP 110
           K E++  +   ++ GN      C +C+  G   ++L CD  +C   +HL CL  PL+ IP
Sbjct: 600 KGEVSRIKQKPQRDGNSLDEEVCSVCEFAGAADSMLLCDGETCDEAFHLFCLKFPLQAIP 659

Query: 111 NGKWQCPKCTQKNDQLKPISNLDSISKRARSKII 144
            G W CP C       + I  +   + + R+++I
Sbjct: 660 EGDWLCPLCLYVERAKEAIGTIVKRTSKLRTRMI 693


>gi|452819338|gb|EME26399.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria sulphuraria]
          Length = 2055

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 265/586 (45%), Positives = 362/586 (61%), Gaps = 34/586 (5%)

Query: 679  EAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQ 738
            E  VKW  LP+ E TWE +D    E+     D F++ E Q      S    P G     +
Sbjct: 441  EYLVKWGSLPFIESTWESMDYLTSEEDMTAIDEFLERE-QAASSPVSSRFNPFG-SKASR 498

Query: 739  SEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFIS 796
                 + EQP  L  +G  L  +QLE +NWL   W  ++NVILADEMGLGKT+   AF+ 
Sbjct: 499  KPFKGIAEQPAWLHGQGRMLRDYQLEGMNWLAFSWCHNRNVILADEMGLGKTLQTIAFLG 558

Query: 797  SLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDP 856
             L  E     P L++VPLST+ +W  EF++W P+ NVV Y G  K+R +IR+YEW +   
Sbjct: 559  WLRHEKNVPGPFLIVVPLSTIASWQREFSIWLPDFNVVLYTGDVKSREMIREYEWFSPH- 617

Query: 857  DNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFS 916
               NKK    KF+VL+TT EMIL D  +   + W ++ VDE HRLKN  S L   L S +
Sbjct: 618  ---NKKQC--KFHVLVTTPEMILGDLQYFSMIRWAIVTVDEAHRLKNEASALHQTLTSLT 672

Query: 917  FQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVA-- 974
              +R+L+TGTPLQN+I E++ LLN+L P  + S S FEEK+ D    +K E +  L A  
Sbjct: 673  SANRLLITGTPLQNSIRELWALLNYLHPEKYNSASEFEEKY-DFQALRKPENITSLHAEL 731

Query: 975  -PHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIG---KGVAQQ 1030
             P++LRR K D  +++P KT  ++ V L  +QA+YYR +LTKN+ +L N G   KG    
Sbjct: 732  RPYILRRQKADVEKSLPRKTYAVLRVGLGPLQAQYYRWILTKNFAML-NAGLKEKGGHAT 790

Query: 1031 SMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRV 1090
            ++LNIVM+L+K CNHPYL  G E D  S + L  + IKAS KL LL  +L  L + GHRV
Sbjct: 791  TLLNIVMELKKCCNHPYLFQGVE-DKNSTDPLQSL-IKASGKLILLDKLLLRLKERGHRV 848

Query: 1091 LIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTR 1149
            LIFSQM ++LDIL+DY  +     +++R+DGS+    RQ A+  +N  D   FVFLLSTR
Sbjct: 849  LIFSQMVRMLDILQDYCRMR--GFSFQRLDGSMPNHLRQRAVDHYNAPDSQDFVFLLSTR 906

Query: 1150 SCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQL 1209
            + GLGINLATADTVII+DSD+NP  D+QA +RAHRIGQ+K + V+RL+ + +VEE IL+ 
Sbjct: 907  AGGLGINLATADTVIIFDSDWNPQNDLQAESRAHRIGQTKEVKVFRLLSKNTVEEDILER 966

Query: 1210 AKKKLMLDQLFVNK-----------SGSQKEVEDILRWGTEELFND 1244
            AK+K +L+ L ++            +  ++E+  ILR+G EELF +
Sbjct: 967  AKRKRVLEHLVISGVEGDASNNARVTFKKEELSAILRFGAEELFRN 1012


>gi|302660586|ref|XP_003021971.1| hypothetical protein TRV_03919 [Trichophyton verrucosum HKI 0517]
 gi|291185893|gb|EFE41353.1| hypothetical protein TRV_03919 [Trichophyton verrucosum HKI 0517]
          Length = 1500

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/650 (39%), Positives = 377/650 (58%), Gaps = 55/650 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK----RKLENY-KAKYGTTVINICD--------E 659
            E+  KW G ++ H +W     +  LA     R+L+NY + +    ++ + D        E
Sbjct: 280  EYYTKWQGLAHYHATW---ETVDTLANCRGIRRLDNYIRREIEQEILFMRDPDVIPEERE 336

Query: 660  RW--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKY 705
            +W              KQ +RVI  R   DG  E ++KW  LPYD CTWE   E +L   
Sbjct: 337  KWSLDRERYIEKIDHFKQVERVIGSREV-DGATEYYIKWKRLPYDGCTWE---EGSLISN 392

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALN 765
                 +    +R +    +S  E         +S+   +   P+ ++ G L   Q++ +N
Sbjct: 393  MAQAQIDAYLDRCSHPPISSRAE----SNPATRSKFEPIHTNPDFIQNGQLKEFQIKGVN 448

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            +L   W + +NV+LADEMGLGKTV   AFI+ L    + + P +V+VPLSTMP W   F 
Sbjct: 449  FLAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRQQQGPFIVIVPLSTMPAWSETFD 508

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             W P++N + Y G   AR II+ YE  A    NL +     KFNVLLTTYE +L D+S L
Sbjct: 509  YWTPDVNYIVYSGPEPARRIIKDYELLADG--NLKRP----KFNVLLTTYEYVLQDASFL 562

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
              + W+ + +DE HRLKN  S+L++ L  F    R+L+TGTP+QNN+GE+  L++FL P 
Sbjct: 563  NQIKWQFMAIDEAHRLKNRDSQLYTKLLDFKSSCRLLITGTPVQNNLGELSALMDFLNPG 622

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
                  + +   N    + K+ +L + + P+MLRR K      +PPK+E+++ VELS +Q
Sbjct: 623  VIEIDENMD--LNSEAASAKLADLTQAIQPYMLRRTKSKVESELPPKSEKIIRVELSDVQ 680

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEM 1065
             E Y+ +LTKNY  L + GKG  + S+LNI+M+L+K  NHP++  G E  +G      E 
Sbjct: 681  LELYKNILTKNYDALNHGGKG-PKPSLLNIMMELKKASNHPFMFWGPEEQAGG-STRRED 738

Query: 1066 RIKA----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
            ++KA    S K+ +L  +L  L  +GHRVLIFSQM ++L+IL +Y++       Y+R+DG
Sbjct: 739  QLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYMDARGF--NYQRLDG 796

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            +++ G R+ AI  +N   S  F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QAM 
Sbjct: 797  TIAAGPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMA 856

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEV 1230
            RAHRIGQ+K + VYRLV + +VEE +L+ A+ KL+L+ + + +  +  E 
Sbjct: 857  RAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGVTDNEA 906


>gi|302496981|ref|XP_003010491.1| hypothetical protein ARB_03192 [Arthroderma benhamiae CBS 112371]
 gi|291174034|gb|EFE29851.1| hypothetical protein ARB_03192 [Arthroderma benhamiae CBS 112371]
          Length = 1504

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/650 (39%), Positives = 377/650 (58%), Gaps = 55/650 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK----RKLENY-KAKYGTTVINICD--------E 659
            E+  KW G ++ H +W     +  LA     R+L+NY + +    ++ + D        E
Sbjct: 280  EYYTKWQGLAHYHATW---ETVDTLANCRGIRRLDNYIRREIEQEILFMRDPDVIPEERE 336

Query: 660  RW--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKY 705
            +W              KQ +RVI  R   DG  E ++KW  LPYD CTWE   E +L   
Sbjct: 337  KWSLDRERYIEKIDHFKQVERVIGSREV-DGATEYYIKWKRLPYDGCTWE---EGSLISN 392

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALN 765
                 +    +R +    +S  E         +S+   +   P+ ++ G L   Q++ +N
Sbjct: 393  MAQAQIDAYLDRCSHPPISSRAE----SNPATRSKFEPIHTNPDFIQNGQLKEFQIKGVN 448

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            +L   W + +NV+LADEMGLGKTV   AFI+ L    + + P +V+VPLSTMP W   F 
Sbjct: 449  FLAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRQQQGPFIVIVPLSTMPAWSETFD 508

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             W P++N + Y G   AR II+ YE  A    NL +     KFNVLLTTYE +L D+S L
Sbjct: 509  YWTPDVNYIVYSGPEPARRIIKDYELLADG--NLKRP----KFNVLLTTYEYVLQDASFL 562

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
              + W+ + +DE HRLKN  S+L++ L  F    R+L+TGTP+QNN+GE+  L++FL P 
Sbjct: 563  NQIKWQFMAIDEAHRLKNRDSQLYTKLLDFKSSCRLLITGTPVQNNLGELSALMDFLNPG 622

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
                  + +   N    + K+ +L + + P+MLRR K      +PPK+E+++ VELS +Q
Sbjct: 623  VIEIDENMD--LNSEAASAKLADLTQAIQPYMLRRTKSKVESELPPKSEKIIRVELSDVQ 680

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEM 1065
             E Y+ +LTKNY  L + GKG  + S+LNI+M+L+K  NHP++  G E  +G      E 
Sbjct: 681  LELYKNILTKNYDALNHGGKG-PKPSLLNIMMELKKASNHPFMFWGPEEQAGG-STRRED 738

Query: 1066 RIKA----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
            ++KA    S K+ +L  +L  L  +GHRVLIFSQM ++L+IL +Y++       Y+R+DG
Sbjct: 739  QLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYMDARGF--NYQRLDG 796

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            +++ G R+ AI  +N   S  F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QAM 
Sbjct: 797  TIAAGPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMA 856

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEV 1230
            RAHRIGQ+K + VYRLV + +VEE +L+ A+ KL+L+ + + +  +  E 
Sbjct: 857  RAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGVTDNEA 906


>gi|307197292|gb|EFN78584.1| Chromodomain-helicase-DNA-binding protein 7 [Harpegnathos saltator]
          Length = 4395

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 273/695 (39%), Positives = 395/695 (56%), Gaps = 65/695 (9%)

Query: 591  AKRVQEPAV-------TESAQVKGKAVSYE-FLVKWVGKSNIHNSWIPESQL-----KVL 637
            +K+ +EP V       T    VK + +  E + VK+   S +H  W  E +L     ++ 
Sbjct: 1590 SKKQEEPPVDSKSTETTTVVDVKPQMIEVEEYFVKYRNFSYLHCEWRTEEELYKGDKRIQ 1649

Query: 638  AKRKLENYKAKYGTTVINICDERWKQPQ-----RVISLRSSKDGT-----REAFVKWTGL 687
            AK K    K +  T +    ++    P      RV+   +  D T     R   VKW  L
Sbjct: 1650 AKLKRFKQKQQQNTNIFENTEDDPFNPDFVEVDRVLDEATHTDPTTGETVRHYLVKWRSL 1709

Query: 688  PYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDEL-PRGKGDCQQSEIVALTE 746
             Y++ TWE  ++   EK         QF R    K   +D+  P+ K +   +  V L E
Sbjct: 1710 QYEDSTWELEEDVDPEK-------IAQFAR--FNKVPPKDQWKPKKKPNA--AAWVKLEE 1758

Query: 747  QPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL 806
             P      +L P+QLE LNWL   W+   N ILADEMGLGKT+ +  F+ ++Y ++  + 
Sbjct: 1759 SPIYKSNNSLRPYQLEGLNWLLFSWYNGHNCILADEMGLGKTIQSLTFVDAVY-KYGIRG 1817

Query: 807  PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSY 866
            P L++ PLST+PNW  EF  W  ++NVV YHG A +R ++++YE +  +      K    
Sbjct: 1818 PFLIIAPLSTIPNWQREFESWT-DMNVVVYHGSAASRTMLQEYEVYYKNEKGQQIK-DLV 1875

Query: 867  KFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGT 926
            KFNVL+TT+E+I+ D + LRG  W + V+DE HRLKN   KL   L   + +HRVLL+GT
Sbjct: 1876 KFNVLITTFEIIITDFNELRGYNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGT 1935

Query: 927  PLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAM 986
            PLQNN+ E+++LLNFL+P  F S  +F ++F +L++  +V +L+ L+ P MLRRLK+D  
Sbjct: 1936 PLQNNVNELFSLLNFLEPVQFSSSEAFLKEFGNLSSEGEVHKLQLLLKPMMLRRLKEDVE 1995

Query: 987  QNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHP 1046
            +++ PK E +V VEL++IQ +YYR +L +N+  L          +++N +M+LRK C HP
Sbjct: 1996 KSLAPKEETVVEVELTNIQKKYYRGILERNFSFLAKGTTSANIPNLMNTMMELRKCCIHP 2055

Query: 1047 YLIPGTEPD------SGSVE----FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQM 1096
            +L+ G E        +G  E    + H + + +S K+ L+  +L  L   GHRVLIFSQM
Sbjct: 2056 FLLNGAEDQIQLDYKTGEKEDSEAYYHAL-VNSSGKMVLIDKLLPKLKASGHRVLIFSQM 2114

Query: 1097 TKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGI 1155
             K LD+LEDYL  +  P  YER+DG +    RQAAI R+++ D  RFVFLL T++ GLGI
Sbjct: 2115 VKCLDLLEDYLLYKKYP--YERIDGRIRGNLRQAAIDRYSKPDSDRFVFLLCTKAGGLGI 2172

Query: 1156 NLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLM 1215
            NL  ADTVIIYDSD+NP  D+QA  R HRIGQ K + VYRL+ R + E  +   A  KL 
Sbjct: 2173 NLTAADTVIIYDSDWNPQNDLQAQARCHRIGQQKMVKVYRLLCRNTYEREMFDKASLKLG 2232

Query: 1216 LDQLFV-------------NKSGSQKEVEDILRWG 1237
            LD+  +             NK  ++KE+ED+L+ G
Sbjct: 2233 LDKAILQSMNTSQGGKDPSNKQLTKKEIEDLLKKG 2267


>gi|390353361|ref|XP_003728093.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like
            [Strongylocentrotus purpuratus]
          Length = 1763

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 284/745 (38%), Positives = 403/745 (54%), Gaps = 79/745 (10%)

Query: 552  EDADVSLRDNEGLTVSEIHITCESTDKDVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVS 611
            ++ DV +  N  + V     T E+    VD   ++  +V +++    +TE  Q+ G+A  
Sbjct: 932  QEEDVDVEGNSEIDVVSFEPT-ETAKFFVDNPDESQANVVEKILASRITEKPQIPGEAQV 990

Query: 612  ---YEFLVKWVGKSNIHNSWIPESQL----KVLAKRKLENYKAKYGTTVINICDE-RWKQ 663
                E+ VK+   S +H  W     L    ++  K K    K +    +++  DE  +  
Sbjct: 991  GEIEEYFVKYRNFSYLHCEWATIETLSADPRIFQKIKRFRLKQQANYGLVSEFDEGEYFN 1050

Query: 664  PQRVISLR----------SSKDGTREAFVKWTGLPYDECTWE---KLDEPALEKYSHLTD 710
            P  ++  R           S +      VKW  LPY+E TWE    +D+   + Y   + 
Sbjct: 1051 PDFIVVDRILDKAITKDEDSDEMVTHYLVKWASLPYEESTWELANDVDKGKKKSYEKCSK 1110

Query: 711  LFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKC 770
            L  + ERQ   +               +SE   L++ P+      L  +QLE +NWL   
Sbjct: 1111 LPSKSERQRKPRPV-------------KSEWNKLSKTPKYKDDNVLREYQLEGVNWLTYS 1157

Query: 771  WHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPN 830
            W   ++ ILADEMGLGKT+    F+  +  +     P LVL PLST+ NW  E   W  +
Sbjct: 1158 WCNGQSCILADEMGLGKTIQTIGFLHEVE-KTGIPGPFLVLAPLSTIVNWQREVESWT-D 1215

Query: 831  LNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPW 890
            +N V YHG +++R +I +YE    D   + K  + YKF +L+TTYE++LAD   L  + W
Sbjct: 1216 MNCVVYHGGSQSRHMIAEYEMFFRDASGV-KIPNIYKFQILITTYEILLADCQELSEIEW 1274

Query: 891  EVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSL 950
             +LV+DE HRLKN   KL   L     +HRVLLTGTPLQNN+ E+++LLNFL+P  F S 
Sbjct: 1275 RILVIDEAHRLKNRNCKLLEGLKILDMEHRVLLTGTPLQNNVDELFSLLNFLEPGRFRSS 1334

Query: 951  SSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYR 1010
              F E F DL T  +VE+L++L+ P MLRRLK+D  +N+ PK E ++ VE++SIQ  YYR
Sbjct: 1335 VQFLEDFGDLKTEGQVEKLQQLLRPMMLRRLKEDVEKNLAPKEETIIEVEMTSIQKRYYR 1394

Query: 1011 AMLTKNYQIL-RNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF-------- 1061
            A+L KN+  L +  G      +++N +M+LRK CNHP+LI G E +    EF        
Sbjct: 1395 AILEKNFSFLTKGAGSTSNLPNLMNTMMELRKCCNHPFLINGGE-EQIVKEFRVAERMSD 1453

Query: 1062 -----------LH-EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
                       LH ++ I+++ K+ LL  +L  L + GH+VLIFSQM + LDILEDYL  
Sbjct: 1454 ETIISVCVNPLLHLKVLIQSAGKMVLLDKLLPKLKEGGHKVLIFSQMIRCLDILEDYLIQ 1513

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDS 1168
            +     +ER+DG V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DS
Sbjct: 1514 KR--YLFERIDGRVRGNMRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDS 1571

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV------- 1221
            D+NP  DIQA  R HRIGQ K + VYRL+ R S E  +   A KKL LD+  +       
Sbjct: 1572 DWNPQNDIQAQARCHRIGQQKAVKVYRLITRNSYEREMFDKASKKLGLDKAVLQSMRNTD 1631

Query: 1222 ---------NKSGSQKEVEDILRWG 1237
                      ++ S+KE+ED+LR G
Sbjct: 1632 KEAAAYNPQQQALSKKEIEDLLRRG 1656


>gi|326480845|gb|EGE04855.1| chromodomain helicase hrp3 [Trichophyton equinum CBS 127.97]
          Length = 1558

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/650 (39%), Positives = 377/650 (58%), Gaps = 55/650 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK----RKLENY-KAKYGTTVINICD--------E 659
            E+  KW G ++ H +W     +  LA     R+L+NY + +    ++ + D        E
Sbjct: 342  EYYTKWQGLAHYHATW---ETVDTLANCRGIRRLDNYIRREIEQEILFMRDPDVIPEERE 398

Query: 660  RW--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKY 705
            +W              KQ +RVI  R   DG  E ++KW  LPYD CTWE   E +L   
Sbjct: 399  KWSLDRERYIEKIDHFKQVERVIGSREV-DGATEYYIKWKRLPYDGCTWE---EGSLISN 454

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALN 765
                 +    +R +    +S  E         +S+   +   P+ ++ G L   Q++ +N
Sbjct: 455  MAQAQIDAYLDRCSHPPISSRAE----SNPATRSKFEPIHTNPDFIQNGQLKEFQIKGVN 510

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            +L   W + +NV+LADEMGLGKTV   AFI+ L    + + P +V+VPLSTMP W   F 
Sbjct: 511  FLAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRQQQGPFIVIVPLSTMPAWSETFD 570

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             W P++N + Y G   AR II+ YE  A    NL +     KFNVLLTTYE +L D+S L
Sbjct: 571  YWTPDVNYIVYSGPEPARRIIKDYELLADG--NLKRP----KFNVLLTTYEYVLQDASFL 624

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
              + W+ + +DE HRLKN  S+L++ L  F    R+L+TGTP+QNN+GE+  L++FL P 
Sbjct: 625  NQIKWQFMAIDEAHRLKNRDSQLYTKLLDFKSSCRLLITGTPVQNNLGELSALMDFLNPG 684

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
                  + +   N    + K+ +L + + P+MLRR K      +PPK+E+++ VELS +Q
Sbjct: 685  VIEIDENMD--LNSEAASAKLADLTQAIQPYMLRRTKSKVESELPPKSEKIIRVELSDVQ 742

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEM 1065
             E Y+ +LTKNY  L + GKG  + S+LNI+M+L+K  NHP++  G E  +G      E 
Sbjct: 743  LELYKNILTKNYDALNHGGKG-PKPSLLNIMMELKKASNHPFMFWGPEEQAGG-STRRED 800

Query: 1066 RIKA----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
            ++KA    S K+ +L  +L  L  +GHRVLIFSQM ++L+IL +Y++       Y+R+DG
Sbjct: 801  QLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYMDARGF--NYQRLDG 858

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            +++ G R+ AI  +N   S  F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QAM 
Sbjct: 859  TIAAGPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMA 918

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEV 1230
            RAHRIGQ+K + VYRLV + +VEE +L+ A+ KL+L+ + + +  +  E 
Sbjct: 919  RAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGVTDNEA 968


>gi|47206405|emb|CAG01534.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1491

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 282/767 (36%), Positives = 408/767 (53%), Gaps = 122/767 (15%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW   S IHN+W   + L   KV   +KL+NYK K                 +   
Sbjct: 303  QYLIKWKDWSYIHNTWESLASLVQQKVKGLKKLDNYKKKHEELSSWLRKASPEDVEFHNC 362

Query: 653  VINICDERWKQPQ---RVISLRSSKDGTREAF----------------VKWTGLPYDECT 693
               +  E  KQ Q   RVI+ R+ K      F                 KW GLPY EC+
Sbjct: 363  QQELTAELSKQFQVVERVIATRTGKASGSSDFPSHSHKNTSSNEPEYLCKWMGLPYSECS 422

Query: 694  WEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKG 753
            WE  D    +K+    D F+   R + K   S+D     K   Q+   VAL +QP  +  
Sbjct: 423  WED-DSLVKKKFQRCIDGFMN--RNSSKTVPSKD----CKVLKQRPRFVALKKQPPFIGD 475

Query: 754  G--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVL 811
                L  +QL+ LNWL   W +  +VILADEMGLGKT+   +F+S L+ + +   P L++
Sbjct: 476  DNLQLRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLLV 535

Query: 812  VPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAI-------------------------- 845
            VPLST+ +W  EF  WAP++NVV Y G   +R                            
Sbjct: 536  VPLSTLTSWQREFETWAPDMNVVVYLGDVMSRKTVGRRSKVTPRVLFFRVVTFMLFPPPV 595

Query: 846  -IRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNS 904
             IR YEW       +N +T   +FN LLTTYE++L D   L  + W  L VDE HRLKN 
Sbjct: 596  KIRDYEW-------VNHQTKRIRFNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKND 648

Query: 905  GSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQ 964
             S L+  L  F   HR+L+TGTPLQN++ E+++LL+FL P  F S   FE+         
Sbjct: 649  DSLLYKTLMEFRSNHRLLITGTPLQNSLKELWSLLHFLMPDKFDSWEDFEDDHGK-GRDN 707

Query: 965  KVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYY--------RAMLTKN 1016
              + L K++ P +LRR+KKD  +++P K E+++ V++S+ Q ++Y        R +LT+N
Sbjct: 708  GYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMSAQQKQFYKSVCLPSCRWILTRN 767

Query: 1017 YQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMR---IKASAKL 1073
            Y+ L    +G +    LNIVM+L+K CNH +LI   +P+ G  E   E     ++ S KL
Sbjct: 768  YKALAKGTRG-SSSGFLNIVMELKKCCNHSFLI--KQPEDGETETYEEQLQAVVRGSGKL 824

Query: 1074 TLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAIT 1133
             LL  +L  L + G+RVLIFSQM ++LDIL +YL  +  P  ++R+DGS+    R+ A+ 
Sbjct: 825  VLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTRKRYP--FQRLDGSIKGEIRKQALD 882

Query: 1134 RFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLL 1192
             FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA  RAHRIGQ K++ 
Sbjct: 883  HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVN 942

Query: 1193 VYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS-------------------QKEVEDI 1233
            +YRLV + +VEE I++ AKKK++LD L + +  +                   ++E+  I
Sbjct: 943  IYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSSSRNTNSNPFNKEELTAI 1002

Query: 1234 LRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGD 1280
            L++G EELF ++ G   + +      I+E +R  E +   +G    D
Sbjct: 1003 LKFGAEELFKEAEGEESEPL---EMDIDEILRLAETRESDQGSSATD 1046


>gi|428181241|gb|EKX50105.1| hypothetical protein GUITHDRAFT_67166 [Guillardia theta CCMP2712]
          Length = 958

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/675 (37%), Positives = 383/675 (56%), Gaps = 66/675 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQ-LKVLAKRKLENYKAKYGTTVI--------NICDERWKQP 664
            FLVKW  KS +H SW+ E+  L    K +L N+ +K+  ++         N  D  + + 
Sbjct: 226  FLVKWREKSYLHTSWVTENDILAEGGKVRLNNFMSKWFDSIQFEVEDRDGNYFDPAFTEV 285

Query: 665  QRVISLR----SSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTL 720
            +R+++ R     S +   E F KW  LPY ECTWE   E  +E    +       E +  
Sbjct: 286  ERIVASRIVQIDSGEEALEYFCKWRNLPYSECTWE-WKESIIESIGSVVA-----EEKIA 339

Query: 721  KKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILA 780
            + +      PR K   ++        +P       L  +Q E +NWL   W++ +  ILA
Sbjct: 340  QHNKFSKPPPRDKRKREK--------RPPFKDQNVLREYQKEGVNWLIFNWYQRRGSILA 391

Query: 781  DEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCA 840
            DEMGLGKTV A  F+  L+       P LV+ PLST+P+WL EF  W  NLN + +HG  
Sbjct: 392  DEMGLGKTVQAVGFLEWLFQCRNRTGPFLVVAPLSTIPHWLREFEAWT-NLNAIVFHGNQ 450

Query: 841  KARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMIL-----ADSSHLRGVPWEVLVV 895
             +R I+  +E++  D +   +    YKFNVL+TT+E+++      + ++L  +PW+ ++V
Sbjct: 451  DSREILINHEFYYYD-EKGKRINDCYKFNVLITTWEIVMKEDERGNKANLADMPWDCVIV 509

Query: 896  DEGHRLKNSGSKLFSLLNSFSF----------QHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
            DE HRLKN  SK F+ L SF             H +L+TGTPLQNN  E++ LLNFL P 
Sbjct: 510  DEAHRLKNKDSKTFTTLKSFKTIPPCTNPENEAHCILMTGTPLQNNTEELWCLLNFLAPK 569

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
             F  + +F  KF  + T  ++ +L+K + P+MLRR K+D  ++IPPK E +V VE+S +Q
Sbjct: 570  QFDDVDAFLNKFGVVETANQIMQLRKELRPYMLRRHKEDVERSIPPKEEIIVEVEMSQLQ 629

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD----SGSVEF 1061
               Y+++L +N++ L+    GV   ++ N+ M+LRK CNHPYL+ G E      S + + 
Sbjct: 630  RTTYKSILERNFEWLKRGAAGVQVPALRNVEMELRKCCNHPYLVDGVEEQVRSRSTASDP 689

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
            +HE+ I+ S K+ LL  ML  L  E H+ LIFSQ  ++LD+LEDY+  +  P  +ER+DG
Sbjct: 690  MHEL-IRHSGKMVLLDKMLPKLRAEKHKALIFSQFIRVLDMLEDYMRAKSFP--FERIDG 746

Query: 1122 SVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             +    RQ+AI R+N+  + RFVFL+ T++ G+GINL TADTVII+DSD+NP  D+QA  
Sbjct: 747  RIRGNARQSAIDRYNELGEHRFVFLICTKAGGIGINLTTADTVIIFDSDWNPQNDLQAQA 806

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQ------------K 1228
            R HRIGQ++ + +YR +   + E R+ + A +K  L++  +  SG Q            K
Sbjct: 807  RCHRIGQTREVKIYRFITAKTYERRMFEKASQKQGLERAVI--SGKQIAGVKRTSKEEKK 864

Query: 1229 EVEDILRWGTEELFN 1243
            E+E +LR G   LFN
Sbjct: 865  ELERLLRHGAYALFN 879


>gi|326476226|gb|EGE00236.1| chromodomain helicase [Trichophyton tonsurans CBS 112818]
          Length = 1558

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/650 (39%), Positives = 377/650 (58%), Gaps = 55/650 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVLAK----RKLENY-KAKYGTTVINICD--------E 659
            E+  KW G ++ H +W     +  LA     R+L+NY + +    ++ + D        E
Sbjct: 342  EYYTKWQGLAHYHATW---ETVDTLANCRGIRRLDNYIRREIEQEILFMRDPDVIPEERE 398

Query: 660  RW--------------KQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKY 705
            +W              KQ +RVI  R   DG  E ++KW  LPYD CTWE   E +L   
Sbjct: 399  KWSLDRERYIEKIDHFKQVERVIGSREV-DGATEYYIKWKRLPYDGCTWE---EGSLISN 454

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALN 765
                 +    +R +    +S  E         +S+   +   P+ ++ G L   Q++ +N
Sbjct: 455  MAQAQIDAYLDRCSHPPISSRAE----SNPATRSKFEPIHTNPDFIQNGQLKEFQIKGVN 510

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            +L   W + +NV+LADEMGLGKTV   AFI+ L    + + P +V+VPLSTMP W   F 
Sbjct: 511  FLAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRQQQGPFIVIVPLSTMPAWSETFD 570

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             W P++N + Y G   AR II+ YE  A    NL +     KFNVLLTTYE +L D+S L
Sbjct: 571  YWTPDVNYIVYSGPEPARRIIKDYELLADG--NLKRP----KFNVLLTTYEYVLQDASFL 624

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
              + W+ + +DE HRLKN  S+L++ L  F    R+L+TGTP+QNN+GE+  L++FL P 
Sbjct: 625  NQIKWQFMAIDEAHRLKNRDSQLYTKLLDFKSSCRLLITGTPVQNNLGELSALMDFLNPG 684

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
                  + +   N    + K+ +L + + P+MLRR K      +PPK+E+++ VELS +Q
Sbjct: 685  VIEIDENMD--LNSEAASAKLADLTQAIQPYMLRRTKSKVESELPPKSEKIIRVELSDVQ 742

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEM 1065
             E Y+ +LTKNY  L + GKG  + S+LNI+M+L+K  NHP++  G E  +G      E 
Sbjct: 743  LELYKNILTKNYDALNHGGKG-PKPSLLNIMMELKKASNHPFMFWGPEEQAGG-STRRED 800

Query: 1066 RIKA----SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
            ++KA    S K+ +L  +L  L  +GHRVLIFSQM ++L+IL +Y++       Y+R+DG
Sbjct: 801  QLKALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYMDARGF--NYQRLDG 858

Query: 1122 SVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            +++ G R+ AI  +N   S  F FLLSTR+ GLGINL TADTVI++DSD+NP AD+QAM 
Sbjct: 859  TIAAGPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMA 918

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEV 1230
            RAHRIGQ+K + VYRLV + +VEE +L+ A+ KL+L+ + + +  +  E 
Sbjct: 919  RAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGVTDNEA 968


>gi|119603201|gb|EAW82795.1| chromodomain helicase DNA binding protein 9, isoform CRA_c [Homo
            sapiens]
          Length = 2349

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/585 (42%), Positives = 345/585 (58%), Gaps = 48/585 (8%)

Query: 681  FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE 740
             VKW  LPY++ TWE  ++  L K      L      Q  + D    + P        S 
Sbjct: 265  LVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------QASRPDTRRLDRP-------PSN 311

Query: 741  IVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLY 799
            I    +Q  + K G  L  +QLE LNWL   W+  +N ILADEMGLGKT+ +  F+  + 
Sbjct: 312  IWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL 371

Query: 800  CEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL 859
                 + P L++ PLST+ NW  EF  W  ++NVV YHG   +R +I+QYE +  D    
Sbjct: 372  LT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGR 429

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
              +  +Y+F  ++TT+EMIL     L  + W  +++DE HRLKN   KL   L   + +H
Sbjct: 430  IIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEH 488

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            +VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F DL T ++V++L+ ++ P MLR
Sbjct: 489  KVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLR 548

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIV--- 1036
            RLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+  L    KG  Q ++ N+V   
Sbjct: 549  RLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL---SKGAGQTNVPNLVNTM 605

Query: 1037 MQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKE 1086
            M+LRK CNHPYLI G E           +  + +F  +  I+++ KL L+  +L  +   
Sbjct: 606  MELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAG 665

Query: 1087 GHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFL 1145
            GH+VLIFSQM + LDILEDYL  +     YER+DG V    RQAAI RF++ D  RFVFL
Sbjct: 666  GHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 723

Query: 1146 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEER 1205
            L TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ+K + VYRLV R S E  
Sbjct: 724  LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYERE 783

Query: 1206 ILQLAKKKLMLDQLFV--------NKSG----SQKEVEDILRWGT 1238
            +   A  KL LD+  +        N  G    S+KE+ED+LR G 
Sbjct: 784  MFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGA 828


>gi|198433296|ref|XP_002124821.1| PREDICTED: similar to chromodomain helicase DNA binding protein 7
            [Ciona intestinalis]
          Length = 4218

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 265/663 (39%), Positives = 380/663 (57%), Gaps = 66/663 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDERWKQPQ----- 665
            F +K+   S +H  W  + + +V  KR   KL+ Y AK  T ++   D+    P      
Sbjct: 1442 FFLKYKNYSYLHCEW--KLKEEVDDKRFDQKLKRYIAK-NTNIVGELDDEIFNPDFVEVD 1498

Query: 666  RVISLRSSKDG-----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFE-RQT 719
            RV+ +  ++D      TR   +KW  L Y++ TWE  +E  ++K     +   +FE R  
Sbjct: 1499 RVLDVMVNEDKETGKVTRHFLIKWCSLAYEDSTWE--EEEDIDK-----NKIFEFESRCK 1551

Query: 720  LKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVIL 779
             +    +   P      + SE   + +    L+      +Q E +NWL   W+  +N IL
Sbjct: 1552 FRPPVKKMSRPHKDMWKRLSEDNTVFQNNNRLRD-----YQFEGINWLLFNWYNKRNCIL 1606

Query: 780  ADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGC 839
            ADEMGLGKT+ +  F+  ++ +   + P LV+ PLST+ NW  EF  W   +N V YHG 
Sbjct: 1607 ADEMGLGKTIQSITFLQKIF-DHGIRGPFLVVAPLSTIANWQREFESWT-TINAVVYHGS 1664

Query: 840  AKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGH 899
              +R ++  YEW   D +NL++    YK + ++TTYEMI+ D+ HLR V W  L++DE H
Sbjct: 1665 QTSRDMLHTYEWFCRD-ENLDEIPGCYKVHAVITTYEMIVLDTPHLRDVDWRCLIIDEAH 1723

Query: 900  RLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            RLKN   KL   L     +H+VLLTGTPLQNN+ E++ LL+FLQP +F    +F  +F +
Sbjct: 1724 RLKNLSCKLVESLRFMQLEHKVLLTGTPLQNNVEELFALLSFLQPETFNCQQAFSLEFGN 1783

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            L    +VE+L++L+ P MLRRLK+D  +++ PK E ++ VEL+SIQ +YYRA+L +N++ 
Sbjct: 1784 LKNNTQVEKLQELLKPMMLRRLKEDVEKSLAPKQETIIEVELTSIQKKYYRAILERNFEF 1843

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMR------------I 1067
            L     G    +++N +M+LRK CNHPYLI G E      + + E R            I
Sbjct: 1844 LAKGTTGGNVPNLMNTMMELRKCCNHPYLIKGAE-----DKIMQEHRVMSNEQNPLQAMI 1898

Query: 1068 KASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL--NIEFGPKTYERVDGSVSV 1125
            ++S KL L+  +L  L + GH+VLIFSQM ++LDILEDYL     F    YER+DG +  
Sbjct: 1899 QSSGKLVLIDKLLPRLKQGGHKVLIFSQMVRVLDILEDYLVQRSYF----YERIDGCIRG 1954

Query: 1126 GDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
             +RQ AI RF++  S RFVFLL TR+ GLGINL  ADTVII+DSD+NP  D+QA  R HR
Sbjct: 1955 NERQMAIDRFSRKGSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHR 2014

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK-SG---------SQKEVEDIL 1234
            IGQ K + +YRL+ R S E  +   A  KL LD+  +   SG         S+ EVED+L
Sbjct: 2015 IGQQKPVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSISGRQDQITSQLSKTEVEDLL 2074

Query: 1235 RWG 1237
            + G
Sbjct: 2075 KRG 2077


>gi|405122403|gb|AFR97170.1| transcription regulator [Cryptococcus neoformans var. grubii H99]
          Length = 1523

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 270/709 (38%), Positives = 383/709 (54%), Gaps = 86/709 (12%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKYGTTVINICDERWKQPQ--- 665
            V+  F +KW   S+IHN+    + LK     +K+ENY  K  T      D+R+  P+   
Sbjct: 283  VNLRFHIKWKDYSHIHNTDETYAFLKNYKGFKKVENYITKVWT-----IDQRYHHPEPDA 337

Query: 666  ------------------------------RVISLRSSKDGTREA---FVKWTGLPYDEC 692
                                          RV+  +  K     A   FVKW  L Y +C
Sbjct: 338  PWKPTQEEMEQYEIDKERIKELQESYKIVERVLDEKEEKRKEGRATLFFVKWMNLQYSDC 397

Query: 693  TWEKL-DEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            TWE   D    +      + F Q + +T     S       +   Q+     + E P  L
Sbjct: 398  TWETYEDVMECQGAKEGIEEFHQRQARTTTPARSISYSIDNRPTYQK-----IAENPPYL 452

Query: 752  K-GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLV 810
              GGAL P QL  LNWL   W K +N ILADEMGLGKTV + +F+S L+       P LV
Sbjct: 453  ACGGALKPFQLTGLNWLAYVWSKGENGILADEMGLGKTVQSVSFLSYLFHVQHQYGPFLV 512

Query: 811  LVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNV 870
            +VPLST+  W A+F  WAP+LNV+ Y G A++R +IRQ+E+             + KFNV
Sbjct: 513  VVPLSTISAWQAQFKKWAPDLNVICYMGSARSRDVIRQFEFGP---------LKNLKFNV 563

Query: 871  LLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQN 930
            LLTTYE IL D   L+ + W+VL VDE HRLKN  S+L+  L SF    ++L+TGTPLQN
Sbjct: 564  LLTTYEFILKDRQDLQQIKWQVLAVDEAHRLKNHESQLYEALKSFWSASKLLITGTPLQN 623

Query: 931  NIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQ--KVEELKKLVAPHMLRRLKKDAMQN 988
            N+ E+  L++FL P  F   + F+   ND +  Q  K+++L   +   MLRRLKKD ++ 
Sbjct: 624  NVKELLALMHFLMPEKFQLANDFD--LNDASEDQGAKIKDLHDKLTTLMLRRLKKDVVKE 681

Query: 989  IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYL 1048
            +P K+ER++ VE+S++Q  YY+ +LTKN+ +L     G  Q S++N+ M+L+K  NHPYL
Sbjct: 682  LPTKSERILRVEMSAMQTHYYKNILTKNFAVLSK--GGTQQVSLMNVAMELKKASNHPYL 739

Query: 1049 IPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
              G E  +     +    +  S K+  L  +L  L  +GHRVLIFSQM +LLDI+ DY+ 
Sbjct: 740  FEGAEDRNKPANEILRGLVMNSGKMVCLDMLLSRLKSDGHRVLIFSQMVRLLDIISDYMT 799

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYD 1167
                   ++R+DG+V    R+ +I  FN   S  F FLLSTR+ GLGINL TADTVII+D
Sbjct: 800  AR--GYVHQRLDGTVPSDVRKKSIEHFNAPGSPDFAFLLSTRAGGLGINLETADTVIIFD 857

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG-- 1225
            SD+NP  D+QAM RAHRIGQ + + ++RLV + ++EE IL+ A +K++L+   +NK    
Sbjct: 858  SDYNPQNDLQAMARAHRIGQQRHVSIFRLVSKGTIEEDILERAMRKMLLEYAIINKMDTT 917

Query: 1226 -----------------SQKEVEDILRWGTEELFNDSPGINGKDMGENN 1257
                             S++E+  IL++G   +F        K + + N
Sbjct: 918  GAHINGSSTPKDKNGDLSKEELSAILKFGARNMFKTDDSTQNKKLDDMN 966


>gi|71022005|ref|XP_761233.1| hypothetical protein UM05086.1 [Ustilago maydis 521]
 gi|46097644|gb|EAK82877.1| hypothetical protein UM05086.1 [Ustilago maydis 521]
          Length = 1834

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 264/679 (38%), Positives = 391/679 (57%), Gaps = 74/679 (10%)

Query: 614  FLVKWVGKSNIHNSWIPESQLK-VLAKRKLENY----------------KAKYGTTVINI 656
            F+VKW G S++H++      L+     ++++NY                 ++     + I
Sbjct: 421  FIVKWKGYSHLHDTHETYDFLRRYRGFKRVDNYIKSVLLREKALLSDPNASREDVEALQI 480

Query: 657  CDER-------WKQPQRVISLR---SSKD---GTREAFVKWTGLPYDECTWEKLDEPALE 703
              ER       +K  +R+I+ R   ++KD         VKW GLPY +CTWE   E    
Sbjct: 481  EKERQIELIESFKTVERIIAQRDNHANKDIPYPHLAYLVKWKGLPYADCTWEAEQE---- 536

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ-QSEIVALTEQPEELKGGALFPHQLE 762
                + D+        +K+ A+     R +   Q + +   +TEQP  +  G L   Q+ 
Sbjct: 537  ----IKDIAQDAINAYVKRSATTTVPWRSQNFSQGRPKYTRMTEQPAYISAGTLKDFQMT 592

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K++N ILADEMGLGKTV   +F+S L+       P LV+VPLST+P W+ 
Sbjct: 593  GLNWLAYLWSKNENGILADEMGLGKTVQTVSFLSYLFHSCYQYGPFLVVVPLSTLPAWMN 652

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            +F  WAP+LN + Y G + +R +IR+YE+  +            KFNVL+TTYE IL D 
Sbjct: 653  QFEHWAPDLNAIAYMGNSASREMIREYEFGPA---------KKMKFNVLVTTYEFILKDR 703

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L  V W+ L VDE HRLKNS ++L+  LNSF    ++L+TGTPLQNN+ E+  LL+FL
Sbjct: 704  AELGQVKWQYLAVDEAHRLKNSEAQLYEALNSFHAAGKLLITGTPLQNNVKELIALLHFL 763

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
            +P  F     F+    D T    ++EL + +   MLRRLKKD ++ +P K+E+++ VE+S
Sbjct: 764  RPDQFDLDVDFDINNVDQTV---IKELHEKLDNVMLRRLKKDVIKELPTKSEKILRVEMS 820

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL 1062
            ++Q   Y+A+LT+NY +L   G   AQ S+LNI ++L+K  NHPYL  GTE  S + E  
Sbjct: 821  AMQQRMYKAILTRNYSLLS--GATTAQFSLLNIAIELKKASNHPYLFDGTEIISDNREET 878

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
             +  +  S K+ LL  +L  L  +GHRVLIFSQM ++LDIL DY+++      ++R+DG+
Sbjct: 879  LKGLVMHSGKMVLLDKLLARLKADGHRVLIFSQMVRMLDILSDYMSLR--GYIHQRLDGT 936

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            VS   R+ AI  FN + S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM R
Sbjct: 937  VSSEIRKKAIEHFNAEGSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMAR 996

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK---SG------------- 1225
            AHR+     + V+R + + +VEE +L+ AK+K++L+   +++   SG             
Sbjct: 997  AHRLNSKFHVSVFRFLTKDTVEEDVLERAKRKMVLEYAIIHQMDTSGTNFAPKASAKNQQ 1056

Query: 1226 --SQKEVEDILRWGTEELF 1242
              S++E+  IL++G + +F
Sbjct: 1057 QFSKEELGAILKFGAQNMF 1075


>gi|328786333|ref|XP_001120496.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Apis
            mellifera]
          Length = 1667

 Score =  441 bits (1135), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 265/687 (38%), Positives = 399/687 (58%), Gaps = 81/687 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK-------------VLAKRKLENYKAKYGTTVINICD- 658
            ++L+KW G S+IHN+W  E  LK             +  +R+++ ++   G   I+  + 
Sbjct: 189  QYLIKWKGWSHIHNTWESEESLKAQKVKGLKKLDNFIKREREIKQWRDYAGPEDIDYFEC 248

Query: 659  ---------ERWKQPQRVISLRSSKDGTR-EAFVKWTGLPYDECTWEKLDEPAL--EKYS 706
                     + +   +R+I+  +  D    + + KW  LPY E TWE   + AL  +K+ 
Sbjct: 249  QLELQQDLLKSYNNVERIIAEYNKPDSEHPDYYCKWESLPYAEATWE---DGALIVKKWP 305

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG---ALFPH 759
                 F   ER+  K+  S+         C+    + +   L  QP+ +  G    L  +
Sbjct: 306  EKIKEFR--EREESKRTPSKH--------CKVLKSRPKFHQLKGQPDYMGKGRDLTLRDY 355

Query: 760  QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPN 819
            Q++ LNW+   W K  +VILADEMGLGKT+    F+  L+   +   P L++VPLSTM +
Sbjct: 356  QMDGLNWMIHSWCKENSVILADEMGLGKTIQTICFLYYLFHTHQLYGPFLLVVPLSTMTS 415

Query: 820  WLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMIL 879
            W  E + WAP++N V Y G   +R +IR+YEW  S        +   KFN +LTTYE++L
Sbjct: 416  WQREMSQWAPDMNFVTYLGDVTSRNVIREYEWCYS--------SKRLKFNAILTTYEIVL 467

Query: 880  ADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLL 939
             D + L  + W VL+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL
Sbjct: 468  KDKAFLGALNWAVLLVDEAHRLKNDDSLLYKALAEFHTNHRLLITGTPLQNSLKELWALL 527

Query: 940  NFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPV 999
            +F+ P  F S   FE K +D    +   +L K + P +LRR+KKD  +++P K E+++ V
Sbjct: 528  HFIMPTKFGSWEEFE-KEHDNAAQKGYSKLHKQLEPFILRRVKKDVEKSLPAKVEQILRV 586

Query: 1000 ELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SG 1057
            E++S+Q +YY+ +LTKNY  LR   KG +  + LNIV++L+K CNH +L   TE +    
Sbjct: 587  EMTSLQKQYYKWILTKNYNALRKGVKG-STMTFLNIVIELKKCCNHAFLTKPTENERKDN 645

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
            + ++L ++ I+ S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL  +  P  ++
Sbjct: 646  NEDYLQQL-IRGSGKLVLLDKLLVRLRETGHRVLIFSQMVRMLDILGEYLQKKHFP--FQ 702

Query: 1118 RVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DGS+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+
Sbjct: 703  RLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL 762

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------------- 1221
            QA  RAHRIGQ  ++ +YRLV + SVEE I++ AK+K++LD L +               
Sbjct: 763  QAQARAHRIGQKNQVNIYRLVTKNSVEEEIVERAKQKMVLDHLVIQRMDTTGRTVLDKKN 822

Query: 1222 ----NKSGSQKEVEDILRWGTEELFND 1244
                N   +++++  IL++G E+LF D
Sbjct: 823  AGTNNNPFNKEDLNAILKFGAEDLFKD 849


>gi|307182228|gb|EFN69559.1| Chromodomain-helicase-DNA-binding protein 1 [Camponotus floridanus]
          Length = 1831

 Score =  441 bits (1135), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 270/687 (39%), Positives = 396/687 (57%), Gaps = 80/687 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENY-KAKYGTTVINICDER-------- 660
            ++ +KW G S+IHN+W  E  LK   V   +KL+N+ K +     +  C E         
Sbjct: 299  QYWIKWKGWSHIHNTWESEESLKTQKVKGLKKLDNFIKRERRLEQMRECIESEDLEYLEC 358

Query: 661  -----------WKQPQRVISLRSSKDGTR-EAFVKWTGLPYDECTWEKLDEPAL--EKYS 706
                       +   +R+I+     D    + F KW  LPY E TWE   + AL  +K+ 
Sbjct: 359  QLELKNQLLKSYNNVERIIADYKKPDSEHPDYFCKWENLPYAEATWE---DGALIVKKWP 415

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEEL---KGGALFPH 759
                 F   +R+  K+  S+         C+    + +   L EQP  +   K   L  +
Sbjct: 416  EKIKEFR--DREDSKRTPSKH--------CKVLKSRPKFYQLNEQPTYMGKEKDLVLRDY 465

Query: 760  QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPN 819
            Q++ +NW+   W K  +VILADEMGLGKT+    F+  L+   +   P L++VPLSTM +
Sbjct: 466  QMDGVNWMIHSWCKENSVILADEMGLGKTIQTICFLYYLFHTQQLHGPFLLVVPLSTMTS 525

Query: 820  WLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMIL 879
            W  E ALWAP++N V Y G   +R +IR+YEW         + +   KFNV+LTTYE++L
Sbjct: 526  WQREMALWAPDMNFVIYLGDVNSRNVIREYEW-------CYRGSKRLKFNVILTTYEIVL 578

Query: 880  ADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLL 939
             D + L  + W VL+VDE HRLKN  S L+  L+ F   HR+L+TGTPLQN++ E++ LL
Sbjct: 579  KDKALLGALNWAVLLVDEAHRLKNDDSLLYKALSEFHTNHRLLITGTPLQNSLKELWALL 638

Query: 940  NFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPV 999
            +F+ P  F S   FE K +D    +   +L K + P +LRR+KKD  +++P K E+++ V
Sbjct: 639  HFIMPTKFVSWEEFE-KQHDNAAQKGYSKLHKQLEPFILRRVKKDVEKSLPAKIEQILRV 697

Query: 1000 ELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SG 1057
            E++S+Q +YY+ +LTKNY  LR   KG +  + LNIV++L+K CNH +L    E +   G
Sbjct: 698  EMTSLQKQYYKWILTKNYDALRKGMKG-SSSTFLNIVIELKKCCNHAFLTKPNEAEREKG 756

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
            + ++L  + I+ S KL LL  +L  L   GHRVLIFSQM K+LDIL +YL     P  ++
Sbjct: 757  NGDYLQTL-IRGSGKLVLLDKLLVRLRDTGHRVLIFSQMVKMLDILSEYLQKRHFP--FQ 813

Query: 1118 RVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DGS+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+
Sbjct: 814  RLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL 873

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG----------- 1225
            QA  RAHRIGQ  ++ +YRLV + SVEE I++ AK+K++LD L + +             
Sbjct: 874  QAQARAHRIGQKNKVNIYRLVTKNSVEEEIVERAKQKMVLDHLVIQRMDTTGRTVLDKKN 933

Query: 1226 --------SQKEVEDILRWGTEELFND 1244
                    +++++  IL++G E+LF D
Sbjct: 934  AGTNSNPFTKEDLTVILKFGAEDLFKD 960


>gi|321261786|ref|XP_003195612.1| chromodomain helicase [Cryptococcus gattii WM276]
 gi|317462086|gb|ADV23825.1| Chromodomain helicase, putative [Cryptococcus gattii WM276]
          Length = 1502

 Score =  441 bits (1135), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 272/700 (38%), Positives = 382/700 (54%), Gaps = 76/700 (10%)

Query: 614  FLVKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKYGTTVINI----CDERWKQPQ--- 665
            F +KW   S+IHN+    + LK     +K+ENY  K      +      D  WK  Q   
Sbjct: 269  FHIKWKDYSHIHNTDETYAFLKNYKGFKKVENYITKVWAIDQSYHHPAPDAAWKPTQEEM 328

Query: 666  --------RVISLRSS---------------KDG-TREAFVKWTGLPYDECTWEKL-DEP 700
                    R+  L+ S               KDG     FVKWT L Y++CTWE   D  
Sbjct: 329  EQYEIDKERIKELQESYKIVERVLDEKEEKRKDGRVTLFFVKWTNLQYNDCTWETYEDVM 388

Query: 701  ALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELK-GGALFPH 759
              +      + F Q + +T     S       +   Q+     + E P  L  GGAL P 
Sbjct: 389  ECQGAKEGIEEFHQRQARTTVPARSISYSIDNRPVYQK-----IPENPPYLACGGALKPF 443

Query: 760  QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPN 819
            QL  LNWL   W K +N ILADEMGLGKTV + +F+S L+       P LV+VPLST+  
Sbjct: 444  QLTGLNWLAYVWSKGENGILADEMGLGKTVQSVSFLSYLFHSQHQYGPFLVVVPLSTISA 503

Query: 820  WLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMIL 879
            W ++F  WAP LNV+ Y G A++R +IRQ+E+             + KFNVLLTTYE IL
Sbjct: 504  WQSQFKKWAPELNVICYMGSARSRDVIRQFEFGP---------LKNLKFNVLLTTYEFIL 554

Query: 880  ADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLL 939
             D   L+ + W+VL VDE HRLKN  S+L+  L SF    ++L+TGTPLQNN+ E+  L+
Sbjct: 555  KDRQDLQQIKWQVLAVDEAHRLKNHESQLYDALKSFWSASKLLITGTPLQNNVKELLALM 614

Query: 940  NFLQPASFPSLSSFEEKFNDLTTTQ--KVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            +FL P  F   + F+   ND +  Q  K+++L   +   MLRRLKKD ++ +P K+ER++
Sbjct: 615  HFLMPEKFQLANDFD--LNDASEDQGAKIKDLHDKLTTLMLRRLKKDVVKELPTKSERIL 672

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSG 1057
             VE+S++Q  YY+ +LTKN+ +L     G  Q S++N+ M+L+K  NHPYL  G E  + 
Sbjct: 673  RVEMSAMQTHYYKNILTKNFAVLSK--GGTQQVSLMNVAMELKKASNHPYLFEGAEDRNK 730

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
                +    +  S K+  L  +L  L  +GHRVLIFSQM +LLDI+ DY+        ++
Sbjct: 731  PANEILRGLVMNSGKMVCLDMLLSRLKSDGHRVLIFSQMVRLLDIISDYMTAR--GYVHQ 788

Query: 1118 RVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG+V    R+ +I  FN   S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+
Sbjct: 789  RLDGTVPSDVRKKSIEHFNAPGSPDFAFLLSTRAGGLGINLETADTVIIFDSDYNPQNDL 848

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG----------- 1225
            QAM RAHRIGQ + + ++RLV + ++EE IL+ A +K++L+   +NK             
Sbjct: 849  QAMARAHRIGQQRHVSIFRLVSKGTIEEDILERAMRKMLLEYAIINKMDTTGAHINGSST 908

Query: 1226 --------SQKEVEDILRWGTEELFNDSPGINGKDMGENN 1257
                    S++E+  IL++G   +F        K + E N
Sbjct: 909  PKDKNGDLSKEELSAILKFGARNMFKTDDNTQNKKLDEMN 948


>gi|444525654|gb|ELV14122.1| Chromodomain-helicase-DNA-binding protein 8 [Tupaia chinensis]
          Length = 2589

 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 248/584 (42%), Positives = 344/584 (58%), Gaps = 48/584 (8%)

Query: 681  FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ 737
             VKW  LPY++ TWE    +DE  + ++  +     + +R    + ++  +L        
Sbjct: 816  LVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKL-------- 867

Query: 738  QSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFIS 796
                    E   E K    L  +QLE +NWL   W+  +N ILADEMGLGKT+ + AF+ 
Sbjct: 868  --------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQ 919

Query: 797  SLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDP 856
             +Y       P LV+ PLST+ NW  EF  W   +N + YHG   +R +I+QYE +  D 
Sbjct: 920  EVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDS 977

Query: 857  DNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFS 916
                    +YKF+ L+TT+EMIL+D   LR + W  +++DE HRLKN   KL   L    
Sbjct: 978  RG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMD 1036

Query: 917  FQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPH 976
             +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F + F DL T ++V++L+ +  P 
Sbjct: 1037 LEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAIPKPM 1096

Query: 977  MLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIV 1036
            MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  L          ++LN +
Sbjct: 1097 MLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTM 1156

Query: 1037 MQLRKVCNHPYLIPGTEP-------DSGSV---EFLHEMRIKASAKLTLLHSMLKVLYKE 1086
            M+LRK CNHPYLI G E        ++  V   +F  +  ++++ KL L+  +L  L   
Sbjct: 1157 MELRKCCNHPYLINGAEEKILTEFREACHVIPHDFHLQAMVRSAGKLVLIDKLLPKLKAG 1216

Query: 1087 GHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFL 1145
            GH+VLIFSQM + LDILEDYL        YER+DG V    RQAAI RF++ D  RFVFL
Sbjct: 1217 GHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1274

Query: 1146 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEER 1205
            L TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQSK + VYRL+ R S E  
Sbjct: 1275 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERE 1334

Query: 1206 ILQLAKKKLMLDQLFV--------NKSG----SQKEVEDILRWG 1237
            +   A  KL LD+  +        N +G    S+KE+ED+LR G
Sbjct: 1335 MFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKG 1378


>gi|350400735|ref|XP_003485940.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Bombus
            impatiens]
          Length = 1797

 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 271/721 (37%), Positives = 411/721 (57%), Gaps = 84/721 (11%)

Query: 582  VGKK-TSGSVAK--RVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLK--- 635
            VGKK  +G+V     ++E        +  +    ++ +KW G S+IHN+W  E  LK   
Sbjct: 250  VGKKGVTGNVTTIYAIEENGNPNPEDLSNEETELQYSIKWKGWSHIHNTWESEESLKAQK 309

Query: 636  ----------VLAKRKLENYKAKYGTTVINICD----------ERWKQPQRVISLRSSKD 675
                      +  +R+++ ++   G   I+  +          + +   +R+I+  +  D
Sbjct: 310  VKGLKKLDNFIKREREIKQWRDYAGPEDIDYFECQLELQQDLLKSYNNVERIIAEYNKPD 369

Query: 676  GTR-EAFVKWTGLPYDECTWEKLDEPAL--EKYSHLTDLFVQFERQTLKKDASEDELPRG 732
                + + KW  LPY E TWE   + AL  +K+      F   ER+  K+  S+      
Sbjct: 370  SDHPDYYCKWESLPYAEATWE---DGALIVKKWPEKIKEFR--EREESKRTPSKH----- 419

Query: 733  KGDCQ----QSEIVALTEQPEELKGG---ALFPHQLEALNWLRKCWHKSKNVILADEMGL 785
               C+    + +   L  QP+ +  G    L  +Q++ LNW+   W K  +VILADEMGL
Sbjct: 420  ---CKVLKSRPKFHQLKGQPDYMGKGRDLTLRDYQMDGLNWMIHSWCKENSVILADEMGL 476

Query: 786  GKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAI 845
            GKT+    F+  L+   +   P L++VPLSTM +W  E + WAP++N V Y G   +R +
Sbjct: 477  GKTIQTICFLYYLFHTHQLYGPFLLVVPLSTMTSWQREMSQWAPDMNFVTYLGDVTSRNV 536

Query: 846  IRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSG 905
            IR+YEW  S        +   KFN +LTTYE++L D + L  + W VL+VDE HRLKN  
Sbjct: 537  IREYEWCYS--------SKRLKFNAILTTYEIVLKDKAFLGALNWAVLLVDEAHRLKNDD 588

Query: 906  SKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQK 965
            S L+  L  F   HR+L+TGTPLQN++ E++ LL+F+ P  F S   FE K +D    + 
Sbjct: 589  SLLYKALAEFHTNHRLLITGTPLQNSLKELWALLHFIMPTKFNSWEEFE-KEHDNAAQKG 647

Query: 966  VEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGK 1025
              +L K + P +LRR+KKD  +++P K E+++ VE++S+Q +YY+ +LTKNY  LR   K
Sbjct: 648  YSKLHKQLEPFILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYNALRKGVK 707

Query: 1026 GVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFLHEMRIKASAKLTLLHSMLKVL 1083
            G +  + LNIV++L+K CNH +L   TE +    + ++L ++ I+ S KL LL  +L  L
Sbjct: 708  G-STMTFLNIVIELKKCCNHAFLTKPTESERKDNNEDYLQQL-IRGSGKLVLLDKLLVRL 765

Query: 1084 YKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-F 1142
             + GHRVLIFSQM ++LDIL +YL  +  P  ++R+DGS+    R+ A+  FN + S+ F
Sbjct: 766  RETGHRVLIFSQMVRMLDILGEYLQKKHFP--FQRLDGSIKGELRKQALDHFNAEGSQDF 823

Query: 1143 VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASV 1202
             FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA  RAHRIGQ  ++ +YRLV + SV
Sbjct: 824  CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSV 883

Query: 1203 EERILQLAKKKLMLDQLFV-------------------NKSGSQKEVEDILRWGTEELFN 1243
            EE I++ AK+K++LD L +                   N   +++++  IL++G E+LF 
Sbjct: 884  EEEIVERAKQKMVLDHLVIQRMDTTGRTVLDKKSAGTNNNPFNKEDLNAILKFGAEDLFK 943

Query: 1244 D 1244
            D
Sbjct: 944  D 944


>gi|350529335|ref|NP_001131089.2| chromodomain-helicase-DNA-binding protein 8 [Xenopus (Silurana)
            tropicalis]
 gi|226706291|sp|B5DE69.2|CHD8_XENTR RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
            Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8
          Length = 2184

 Score =  441 bits (1134), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 277/727 (38%), Positives = 401/727 (55%), Gaps = 76/727 (10%)

Query: 556  VSLRDNEGLTVSEIHITCESTDKDVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFL 615
            + L D+E +   +  +   S +    V K  S  +AK+  E    E  +V+      E+ 
Sbjct: 562  MPLPDSEAVPSMQFFVENPSEEDAAIVDKILSMRLAKK--ELPTGEYVEVE------EYF 613

Query: 616  VKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER-------WKQPQR 666
            VK+   S +H  W    QL+   +  +KL+ +K K  T + +   E        + +  R
Sbjct: 614  VKYKNYSYLHCEWATIEQLERDKRIHQKLKRFKTKM-TQMQHFLQEDEESFNPDYVEVDR 672

Query: 667  VI--SLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            ++  S  + KD         VKW  LPY++ TWE    +D+  +E++       ++  + 
Sbjct: 673  ILDESHSTDKDNGEPVVYYLVKWCSLPYEDSTWELKEDVDDGKIEEFKR-----IEARQP 727

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             LK+ A        K +  +          E   G  L  +QLE +NWL   W+  +N I
Sbjct: 728  NLKRVARPAATSWKKLELSR----------EYQNGNQLREYQLEGVNWLLFNWYNRQNCI 777

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  +Y     + P LV+ PLST+ NW  EF  W   +N + YHG
Sbjct: 778  LADEMGLGKTIQSITFLQEVY-NVGIRGPFLVIAPLSTITNWEREFGSWT-QMNTIVYHG 835

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R +I+QYE +  D         +YKF+ L+TT+EM+L+D   LR + W  +++DE 
Sbjct: 836  SLASRQMIQQYEMYCKDSKG-RLIPGAYKFDALITTFEMVLSDCPELREIEWRCVIIDEA 894

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P  F S + F + F 
Sbjct: 895  HRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTQFSSEAEFLKDFG 954

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 955  DLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS 1014

Query: 1019 ILRNIGKGVAQQS---MLNIVMQLRKVCNHPYLIPGTEPDSGS----------VEFLHEM 1065
             L    KG +Q +   +LN +M+LRK CNHPYLI G E    S           +F  + 
Sbjct: 1015 FLT---KGASQSNTPNLLNTMMELRKCCNHPYLITGAEEKIISEFREATPVVPPDFHVQA 1071

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             +++S KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V  
Sbjct: 1072 MVRSSGKLVLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVRG 1129

Query: 1126 GDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HR
Sbjct: 1130 NMRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHR 1189

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG------------SQKEVE 1231
            IGQSK + +YRL+ R S E  +   A  KL LD+ +  + SG            ++KE+E
Sbjct: 1190 IGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDNHLSGPIQQFTKKEIE 1249

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1250 DLLRKGA 1256


>gi|380014625|ref|XP_003691326.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 1-like [Apis florea]
          Length = 1795

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 264/687 (38%), Positives = 398/687 (57%), Gaps = 81/687 (11%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK-------------VLAKRKLENYKAKYGTTVINICD- 658
            ++L+KW G S+IHN+W  E  LK             +  +R+++ ++   G   I+  + 
Sbjct: 283  QYLIKWKGWSHIHNTWESEESLKAQKVKGLKKLDNFIKREREIKQWRDYAGPEDIDYFEC 342

Query: 659  ---------ERWKQPQRVISLRSSKDGTR-EAFVKWTGLPYDECTWEKLDEPAL--EKYS 706
                     + +   +R+I+  +  D    + + KW  LPY E TWE   + AL  +K+ 
Sbjct: 343  QLELQQDLLKSYNNVERIIAEYNKPDSEHPDYYCKWESLPYAEATWE---DGALIVKKWP 399

Query: 707  HLTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG---ALFPH 759
                 F   ER+  K+  S+         C+    + +   L  QP+ +  G    L  +
Sbjct: 400  EKIKEFR--EREESKRTPSKH--------CKVLKSRPKFHQLKGQPDYMGKGRDLTLRDY 449

Query: 760  QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPN 819
            Q++ LNW+   W K  +VILADEMGLGKT+    F+  L+   +   P L++VPLSTM +
Sbjct: 450  QMDGLNWMIHSWCKENSVILADEMGLGKTIQTICFLYYLFHTHQLYGPFLLVVPLSTMTS 509

Query: 820  WLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMIL 879
            W  E + WAP++N V Y G   +R +IR+YEW  S        +   KFN +LTTYE++L
Sbjct: 510  WQREMSQWAPDMNFVTYLGDVTSRNVIREYEWCYS--------SKRLKFNAILTTYEIVL 561

Query: 880  ADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLL 939
             D + L  + W VL+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL
Sbjct: 562  KDKAFLGALNWAVLLVDEAHRLKNDDSLLYKALAEFHTNHRLLITGTPLQNSLKELWALL 621

Query: 940  NFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPV 999
            +F+ P  F S   FE K +D    +   +L K + P +LRR+KKD  +++P K E+++ V
Sbjct: 622  HFIMPTKFGSWEEFE-KEHDNAAQKGYSKLHKQLEPFILRRVKKDVEKSLPAKVEQILRV 680

Query: 1000 ELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD--SG 1057
            E++S+Q +YY+ +LTKNY  LR   KG +  + LNIV++ +K CNH +L   TE +    
Sbjct: 681  EMTSLQKQYYKWILTKNYNALRKGVKG-STMTFLNIVIEXKKCCNHAFLTKPTENERKDN 739

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
            + ++L ++ I+ S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL  +  P  ++
Sbjct: 740  NEDYLQQL-IRGSGKLVLLDKLLVRLRETGHRVLIFSQMVRMLDILGEYLQKKHFP--FQ 796

Query: 1118 RVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DGS+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP  D+
Sbjct: 797  RLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL 856

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV--------------- 1221
            QA  RAHRIGQ  ++ +YRLV + SVEE I++ AK+K++LD L +               
Sbjct: 857  QAQARAHRIGQKNQVNIYRLVTKNSVEEEIVERAKQKMVLDHLVIQRMDTTGRTVLDKKN 916

Query: 1222 ----NKSGSQKEVEDILRWGTEELFND 1244
                N   +++++  IL++G E+LF D
Sbjct: 917  AGTNNNPFNKEDLNAILKFGAEDLFKD 943


>gi|197246330|gb|AAI68549.1| Unknown (protein for MGC:184754) [Xenopus (Silurana) tropicalis]
          Length = 2179

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 277/727 (38%), Positives = 401/727 (55%), Gaps = 76/727 (10%)

Query: 556  VSLRDNEGLTVSEIHITCESTDKDVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFL 615
            + L D+E +   +  +   S +    V K  S  +AK+  E    E  +V+      E+ 
Sbjct: 557  MPLPDSEAVPSMQFFVENPSEEDAAIVDKILSMRLAKK--ELPTGEYVEVE------EYF 608

Query: 616  VKWVGKSNIHNSWIPESQLKVLAK--RKLENYKAKYGTTVINICDER-------WKQPQR 666
            VK+   S +H  W    QL+   +  +KL+ +K K  T + +   E        + +  R
Sbjct: 609  VKYKNYSYLHCEWATIEQLERDKRIHQKLKRFKTKM-TQMQHFLQEDEESFNPDYVEVDR 667

Query: 667  VI--SLRSSKDGTREA---FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQ 718
            ++  S  + KD         VKW  LPY++ TWE    +D+  +E++       ++  + 
Sbjct: 668  ILDESHSTDKDNGEPVVYYLVKWCSLPYEDSTWELKEDVDDGKIEEFKR-----IEARQP 722

Query: 719  TLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVI 778
             LK+ A        K +  +          E   G  L  +QLE +NWL   W+  +N I
Sbjct: 723  NLKRVARPAATSWKKLELSR----------EYQNGNQLREYQLEGVNWLLFNWYNRQNCI 772

Query: 779  LADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 838
            LADEMGLGKT+ +  F+  +Y     + P LV+ PLST+ NW  EF  W   +N + YHG
Sbjct: 773  LADEMGLGKTIQSITFLQEVY-NVGIRGPFLVIAPLSTITNWEREFGSWT-QMNTIVYHG 830

Query: 839  CAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEG 898
               +R +I+QYE +  D         +YKF+ L+TT+EM+L+D   LR + W  +++DE 
Sbjct: 831  SLASRQMIQQYEMYCKDSKG-RLIPGAYKFDALITTFEMVLSDCPELREIEWRCVIIDEA 889

Query: 899  HRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 958
            HRLKN   KL   L     +H+VLLTGTPLQN + E+++LL+FL+P  F S + F + F 
Sbjct: 890  HRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTQFSSEAEFLKDFG 949

Query: 959  DLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1018
            DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+ 
Sbjct: 950  DLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS 1009

Query: 1019 ILRNIGKGVAQQS---MLNIVMQLRKVCNHPYLIPGTEPDSGS----------VEFLHEM 1065
             L    KG +Q +   +LN +M+LRK CNHPYLI G E    S           +F  + 
Sbjct: 1010 FLT---KGASQSNTPNLLNTMMELRKCCNHPYLITGAEEKIISEFREATPVVPPDFHVQA 1066

Query: 1066 RIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSV 1125
             +++S KL L+  +L  L   GH+VLIFSQM + LDILEDYL        YER+DG V  
Sbjct: 1067 MVRSSGKLVLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVRG 1124

Query: 1126 GDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHR 1184
              RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HR
Sbjct: 1125 NMRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHR 1184

Query: 1185 IGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG------------SQKEVE 1231
            IGQSK + +YRL+ R S E  +   A  KL LD+ +  + SG            ++KE+E
Sbjct: 1185 IGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDNHLSGPIQQFTKKEIE 1244

Query: 1232 DILRWGT 1238
            D+LR G 
Sbjct: 1245 DLLRKGA 1251


>gi|164448642|ref|NP_001106734.1| chromodomain-helicase-DNA-binding protein 1 [Bombyx mori]
 gi|269969346|sp|A9X4T1.1|CHD1_BOMMO RecName: Full=Chromodomain-helicase-DNA-binding protein 1;
            Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1
 gi|89213694|gb|ABD64154.1| CHD1 [Bombyx mori]
          Length = 1365

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 279/694 (40%), Positives = 393/694 (56%), Gaps = 87/694 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENY----------KAKYGTTVINI--C 657
            ++L+KW G S+IHN+W  E  +   KV   +KLEN+          + + G   I+   C
Sbjct: 39   QYLIKWKGWSHIHNTWESEKTINDQKVKGLKKLENFIKKEVEISWWRQQAGPEDIDYYEC 98

Query: 658  DERWKQP--------QRVISLRSSK---DGT-REAFVKWTGLPYDECTWEKLDEPALEKY 705
                +Q         +R+I+ ++ +    GT  E F KW  LPY + TWE  D   +EK 
Sbjct: 99   QSELQQELVKTYNNVERIIAEQNRELEGGGTAHEYFCKWESLPYADATWE--DAVLIEKR 156

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
              +      F+ +   K       P  K   ++ +   + EQPE +   +   L  +Q++
Sbjct: 157  WPVE--VEHFKSREAAKSTPSRHCPVLK---RRPKFHQIKEQPEYVGKDSSYHLRDYQMD 211

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  +VILADEMGLGKT+    F+  L+       P L +VPLSTM  W  
Sbjct: 212  GLNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFKSQHLYGPFLCVVPLSTMTAWQR 271

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            EF  WAP++NVV Y G   +R IIRQ+EW  S    L       KFN +LTTYE++L D 
Sbjct: 272  EFQQWAPDINVVTYIGDVSSRDIIRQFEWSFSSSKRL-------KFNAILTTYEILLKDR 324

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
              LR   W  L+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++ LL+F+
Sbjct: 325  QFLRSFSWACLLVDEAHRLKNDDSLLYKALKEFDTNHRLLVTGTPLQNSLKELWALLHFI 384

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FE+   D   T+  E+L K + P +LRR KKD  +++P K E+++ VE++
Sbjct: 385  MPYKFESWEDFEKDHED-AATKGYEKLHKQLEPFILRRQKKDVEKSLPAKVEQILRVEMT 443

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD------- 1055
            SIQ +YY+ +LTKNY  LR   KG +  + +NIV++L+K CNH  L   T+P+       
Sbjct: 444  SIQKQYYKWILTKNYSALRKGVKG-SINTFINIVIELKKCCNHALL---TKPEDFESRAS 499

Query: 1056 ---SGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFG 1112
               S +VE L    ++ S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL     
Sbjct: 500  LATSDAVEKL----LRGSGKLLLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQRRHF 555

Query: 1113 PKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFN 1171
            P  ++R+DGS+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+N
Sbjct: 556  P--FQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWN 613

Query: 1172 PHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---------- 1221
            P  D+QA  RAHRIGQ  ++ +YRLV   SVEE I++ AK+K++LD L +          
Sbjct: 614  PQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEDIVERAKRKMVLDHLVIQRMDTTGKTV 673

Query: 1222 -----------NKSGSQKEVEDILRWGTEELFND 1244
                       N   +++++  IL++G EELF D
Sbjct: 674  LNKRDASGTTANNPFNKEDLNAILKFGAEELFKD 707


>gi|443893757|dbj|GAC71213.1| V-SNARE [Pseudozyma antarctica T-34]
          Length = 1242

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 265/681 (38%), Positives = 396/681 (58%), Gaps = 78/681 (11%)

Query: 614  FLVKWVGKSNIHNSWIPESQLK-VLAKRKLENY----------------KAKYGTTVINI 656
            F+VKW G S++H++      LK     ++++NY                 ++     + I
Sbjct: 369  FIVKWKGYSHLHDTHETYDFLKRYRGFKRVDNYIKHVFYRQKALLSDPNASREDIEALQI 428

Query: 657  CDER-------WKQPQRVISLRSSKDGTRE-------AFVKWTGLPYDECTWEKLDEPAL 702
              ER       +K  +R+I+ R++ D  ++         VKW GLPY +CTWE  +E  +
Sbjct: 429  ERERQAELIESFKTVERIIAQRNN-DANKDIPYPHLAYLVKWKGLPYADCTWEAEEE--I 485

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ-QSEIVALTEQPEELKGGALFPHQL 761
            ++ +H  D    +    L +  S     R +   Q + +   +TEQP  +  G L   Q+
Sbjct: 486  KELAH--DAIAAY----LARSTSTLVPWRSQNFSQGRPKYTRMTEQPAYISAGTLKDFQM 539

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
              LNWL   W K++N ILADEMGLGKTV   AF+S L+       P LV+VPLST+P W+
Sbjct: 540  TGLNWLAYLWSKNENGILADEMGLGKTVQTVAFLSYLFHSCYQYGPFLVVVPLSTLPAWM 599

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
             +F  WAP+LN + Y G + +R +IR YE+    P  +       +FNVL+TTYE IL D
Sbjct: 600  NQFEHWAPDLNAIAYIGNSASRDMIRDYEF--GPPKKM-------RFNVLVTTYEFILKD 650

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
             + L  + W+ L VDE HRLKNS ++L+  LNSF    ++L+TGTPLQNN+ E+  LL+F
Sbjct: 651  RAELGQIKWQYLAVDEAHRLKNSEAQLYEALNSFHAAGKLLITGTPLQNNVKELIALLHF 710

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKV-EELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
            L+P  F      +  F+     Q V +EL + +   MLRRLKKD ++ +P K+E+++ VE
Sbjct: 711  LRPDQF----DLDVDFDINNVDQAVIKELHEKLDNVMLRRLKKDVVKELPTKSEKILRVE 766

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            +S++Q   Y+A+LT+NY +L   G   AQ S+LNI ++L+K  NHPYL  GTE  S + E
Sbjct: 767  MSAMQQRMYKAILTRNYSLLS--GASTAQFSLLNIAIELKKASNHPYLFDGTEAISDNRE 824

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
               +  +  S K+ LL  +L  L  +GHRVLIFSQM ++LDIL DY+++      ++R+D
Sbjct: 825  ETLKGLVMHSGKMVLLDKLLARLKADGHRVLIFSQMVRMLDILSDYMSLR--GYIHQRLD 882

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G++S   R+ AI  FN + S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM
Sbjct: 883  GTISSEVRKKAIEHFNAEGSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAM 942

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK---SG----------- 1225
             RAHR+     + V+RL+ + +VEE +L+ AK+K++L+   +++   SG           
Sbjct: 943  ARAHRLNSKFHVSVFRLLTKDTVEEDVLERAKRKMVLEYAIIHQMDTSGTNFAPKGSAKN 1002

Query: 1226 ----SQKEVEDILRWGTEELF 1242
                S++E+  IL++G + +F
Sbjct: 1003 QPQFSKEELGAILKFGAQNMF 1023


>gi|432090336|gb|ELK23764.1| Chromodomain-helicase-DNA-binding protein 8 [Myotis davidii]
          Length = 2070

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/586 (42%), Positives = 344/586 (58%), Gaps = 50/586 (8%)

Query: 681  FVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ 737
             VKW  LPY++ TWE    +DE  + ++  +     + +R    + ++  +L        
Sbjct: 291  LVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKL-------- 342

Query: 738  QSEIVALTEQPEELKG-GALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFIS 796
                    E   E K    L  +QLE +NWL   W+  +N ILADEMGLGKT+ + AF+ 
Sbjct: 343  --------ELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQ 394

Query: 797  SLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDP 856
             +Y       P LV+ PLST+ NW  EF  W   +N + YHG   +R +I+QYE +  D 
Sbjct: 395  EVY-NVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDS 452

Query: 857  DNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFS 916
                    +YKF+ L+TT+EMIL+D   LR + W  +++DE HRLKN   KL   L    
Sbjct: 453  RG-RLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMD 511

Query: 917  FQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPH 976
             +H+VLLTGTPLQN + E+++LL+FL+P+ FPS S F + F DL T ++V++L+ ++ P 
Sbjct: 512  LEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPM 571

Query: 977  MLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIV 1036
            MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L KN+  L          ++LN +
Sbjct: 572  MLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTM 631

Query: 1037 MQLRKVCNHPYLIPGTEPDSGSVEFL-------HEMRIKA----SAKLTLLHSMLKVLYK 1085
            M+LRK CNHPYLI G E +    EF        H+  ++A    + KL L+  +L  L  
Sbjct: 632  MELRKCCNHPYLINGAE-EKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKA 690

Query: 1086 EGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVF 1144
             GH+VLIFSQM + LDILEDYL        YER+DG V    RQAAI RF++ D  RFVF
Sbjct: 691  GGHKVLIFSQMVRCLDILEDYLIQRR--YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 748

Query: 1145 LLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEE 1204
            LL TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQSK + VYRL+ R S E 
Sbjct: 749  LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYER 808

Query: 1205 RILQLAKKKLMLDQLFV--------NKSG----SQKEVEDILRWGT 1238
             +   A  KL LD+  +        N +G    S+KE+ED+LR G 
Sbjct: 809  EMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGA 854


>gi|321461550|gb|EFX72581.1| hypothetical protein DAPPUDRAFT_227473 [Daphnia pulex]
          Length = 1801

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 284/748 (37%), Positives = 411/748 (54%), Gaps = 114/748 (15%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENY----------KAKYGTTVINI 656
            V  +FL+KW+G S+IHN+W  E  L   KV   +KLENY          KA+     +  
Sbjct: 245  VEQQFLIKWLGWSHIHNTWESEQTLRDQKVKGLKKLENYLKRDDEIRVWKARASPEDVEY 304

Query: 657  CD----------ERWKQPQRVISL-------RSSKDGTREAFVKWTGLPYDECTWEKLDE 699
             +            +   +R+I         R ++    +  +KW  LPY + TWE   +
Sbjct: 305  YECQQELQQELLLSYMAVERIIGNLAKCAENRKAESEHPDYLIKWESLPYSDATWE---D 361

Query: 700  PALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEELKGG- 754
             AL    +   +    ER+  K+  S+         C+    + +   L EQP+ + G  
Sbjct: 362  GALIVKKYQIKIREFREREDSKRTPSKL--------CRALKFRPKFTPLKEQPDFIGGDP 413

Query: 755  --ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLV 812
               L  +QL  LNW+   W K  +VILADEMGLGKT+   +F++ L+   +   P LV+V
Sbjct: 414  TCTLRDYQLNGLNWMVHAWCKENSVILADEMGLGKTIQTISFLNYLFHAQQLYGPFLVVV 473

Query: 813  PLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR------------------------- 847
            PLSTM  W  EFA WAPN+NVV Y G   +R ++R                         
Sbjct: 474  PLSTMAAWQKEFAQWAPNINVVTYIGDMTSRDLVRMFNSYHAKLDATNVLQCRFLFVQLR 533

Query: 848  QYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSK 907
            QYEW    P N        KFN LLTTYE++L D S L  V W  L+VDE HRLKN  S 
Sbjct: 534  QYEW--CHPGN-----KRLKFNALLTTYEILLKDKSFLGAVSWACLMVDEAHRLKNEDSL 586

Query: 908  LFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVE 967
            L+  L  F   HR+L+TGTPLQN++ E++ LL+F+ P  F +   FEE+  +    +   
Sbjct: 587  LYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIMPEKFNTWDVFEEEHGN-AEQKGYS 645

Query: 968  ELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGV 1027
             L K + P++LRR+KKD  +++P K E+++ V++SS+Q +YY+ +LTKNY  LR   KG 
Sbjct: 646  RLHKQLEPYILRRVKKDVEKSLPAKVEQILRVDMSSLQKQYYKWILTKNYTALRKGNKGS 705

Query: 1028 AQQSMLNIVMQLRKVCNHPYLIPGTEPD----SGSVEFLHEMRIKASAKLTLLHSMLKVL 1083
            A  + +NIVM+L+K CNH +L    E +    + + E L ++ I+ S KL LL  +L  L
Sbjct: 706  AS-TFVNIVMELKKCCNHAFLTKPQENERRYGASATEQLQQL-IRGSGKLVLLDKLLVRL 763

Query: 1084 YKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-F 1142
             + GHRVLIFSQM ++LD++ +YL +   P  ++R+DG +    R+ A+  FN + S+ F
Sbjct: 764  RETGHRVLIFSQMVRMLDLIAEYLQLRHFP--FQRLDGGIKGELRRKAMEHFNAEGSQDF 821

Query: 1143 VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASV 1202
             FLLSTR+ GLGINLATADTVII+DSD+NP  D+QA  RAHRIGQ  ++ +YRLV +ASV
Sbjct: 822  CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKASV 881

Query: 1203 EERILQLAKKKLMLDQLFVNKSGS--------------------QKEVEDILRWGTEELF 1242
            EE I++ AK+K++LD L + +  +                    ++E+  IL++G EELF
Sbjct: 882  EEDIVERAKRKMVLDHLVIQRMDTTGRTVLDRKANNPSNATPFNKEELNAILKFGAEELF 941

Query: 1243 NDSPGINGKDMGENNTSIEEAVRDLEQK 1270
             D    +G+D  E    I+E +R  E +
Sbjct: 942  KDDE--DGED--EPACDIDEILRRAETR 965


>gi|332026198|gb|EGI66340.1| Chromodomain-helicase-DNA-binding protein 1 [Acromyrmex echinatior]
          Length = 1821

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 268/690 (38%), Positives = 392/690 (56%), Gaps = 86/690 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAKYGTTVINICDER--------- 660
            ++L+KW G S+IHN+W  E  LK   V   +KL+N+  +    VI    E          
Sbjct: 287  QYLIKWKGWSHIHNTWESEESLKAQKVKGLKKLDNFIKR--ERVIEYTREHAEPEELDYL 344

Query: 661  -------------WKQPQRVISLRSSKDGTR-EAFVKWTGLPYDECTWEK---LDEPALE 703
                         +   +R+I+     D    + F KW  L Y E TWE    + +   E
Sbjct: 345  ECQLELKQDLLKSYNNVERIIADYKKPDSVYPDYFCKWENLSYAEATWEDGILIVKKWPE 404

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALTEQPEEL---KGGAL 756
            K     D      R+  K+  S+         C+    + +   L EQP  +   K   L
Sbjct: 405  KIKEFCD------REDSKRTPSKH--------CKVLKSRPKFYQLNEQPTYMGKEKDLIL 450

Query: 757  FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLST 816
              +Q++ LNWL   W K  +VILADEMGLGKT+    F+  L+       P L++VPLST
Sbjct: 451  RDYQMDGLNWLIHSWCKENSVILADEMGLGKTIQTICFLYYLFHTQHLHGPFLLVVPLST 510

Query: 817  MPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYE 876
            M +W  E + WAP++N V Y G   +R +IR+YEW   D   L       KFNV+LTTYE
Sbjct: 511  MTSWQREMSQWAPDINFVTYLGDINSRNVIREYEWCYQDSKRL-------KFNVILTTYE 563

Query: 877  MILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMY 936
            ++L D + L  + W VL+VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E++
Sbjct: 564  IVLKDKTFLGALNWAVLLVDEAHRLKNDDSLLYKALTEFHTNHRLLITGTPLQNSLKELW 623

Query: 937  NLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERM 996
             LL+F+ P+ F S   FE++ +D    +   +L K + P +LRR+KKD  +++P K E++
Sbjct: 624  ALLHFIMPSKFASWEEFEKQ-HDNAAQKGYSKLHKQLEPFILRRVKKDVEKSLPAKVEQI 682

Query: 997  VPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP--GTEP 1054
            + VE++S+Q +YY+ +LTKNY+ LR   KG +  + LNIV++L+K CNH +L      E 
Sbjct: 683  LRVEMTSLQKQYYKWILTKNYEALRKGVKG-STTTFLNIVIELKKCCNHAFLTKPMDAER 741

Query: 1055 DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPK 1114
            +  + ++L ++ I+ S KL LL  +L  L   GHRVLIFSQM ++LDIL +YL     P 
Sbjct: 742  EKTNEDYLQQL-IRGSGKLVLLDKLLVRLRDTGHRVLIFSQMVRMLDILGEYLQRRHFP- 799

Query: 1115 TYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPH 1173
             ++R+DGS+    R+ A+  FN + S+ F FLLSTR+ GLGINLATADTVII+DSD+NP 
Sbjct: 800  -FQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQ 858

Query: 1174 ADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS------- 1226
             D+QA  RAHRIGQ  ++ +YRLV + SVEE I++ AK+K++LD L + +  +       
Sbjct: 859  NDLQAQARAHRIGQKNKVNIYRLVTKKSVEEEIVERAKQKMVLDHLVIQRMDTTGRTVLD 918

Query: 1227 ------------QKEVEDILRWGTEELFND 1244
                        ++++  IL++G E+LF D
Sbjct: 919  KKNAGTNSNPFNKEDLNAILKFGAEDLFKD 948


>gi|355757747|gb|EHH61272.1| Chromodomain-helicase-DNA-binding protein 9 [Macaca fascicularis]
          Length = 2833

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 249/585 (42%), Positives = 345/585 (58%), Gaps = 48/585 (8%)

Query: 681  FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE 740
             VKW  LPY++ TWE  ++  L K      L      Q  + D    + P        S 
Sbjct: 721  LVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------QASRPDTRRLDRP-------PSN 767

Query: 741  IVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLY 799
            I    +Q  + K G  L  +QLE LNWL   W+  +N ILADEMGLGKT+ +  F+  + 
Sbjct: 768  IWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL 827

Query: 800  CEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL 859
                 + P L++ PLST+ NW  EF  W  ++NVV YHG   +R +I+QYE +  D    
Sbjct: 828  LT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGR 885

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
              +  +Y+F  ++TT+EMIL     L  + W  +++DE HRLKN   KL   L   + +H
Sbjct: 886  IIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEH 944

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            +VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F DL T ++V++L+ ++ P MLR
Sbjct: 945  KVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLR 1004

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIV--- 1036
            RLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+  L    KG  Q ++ N+V   
Sbjct: 1005 RLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL---SKGAGQTNVPNLVNTM 1061

Query: 1037 MQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKE 1086
            M+LRK CNHPYLI G E           +  + +F  +  I+++ KL L+  +L  +   
Sbjct: 1062 MELRKCCNHPYLIKGAEEKILGEFRDAYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAG 1121

Query: 1087 GHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFL 1145
            GH+VLIFSQM + LDILEDYL  +     YER+DG V    RQAAI RF++ D  RFVFL
Sbjct: 1122 GHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1179

Query: 1146 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEER 1205
            L TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ+K + VYRLV R S E  
Sbjct: 1180 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYERE 1239

Query: 1206 ILQLAKKKLMLDQLFV--------NKSG----SQKEVEDILRWGT 1238
            +   A  KL LD+  +        N  G    S+KE+ED+LR G 
Sbjct: 1240 MFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGA 1284


>gi|348503900|ref|XP_003439500.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
            [Oreochromis niloticus]
          Length = 1695

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 273/687 (39%), Positives = 396/687 (57%), Gaps = 84/687 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKA-----------------KYGTT 652
            ++L+KW   ++IHN+W  E  LK   V   +KL+N+K                  +Y   
Sbjct: 313  QYLIKWKNWAHIHNTWETEETLKLQNVKGMKKLDNFKKKDQEKKKWLKAASPEDIEYFNC 372

Query: 653  VINICDERWKQPQ---RVI--SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
               + D+   Q Q   R+I  S + S  G  +   KW GLPY EC+WE     A +    
Sbjct: 373  QEELMDDLRSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWEDGGLIAKKFQKC 432

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDC----QQSEIVALTEQPEELKGGAL--FPHQL 761
            + D   + + +T+              DC    Q+   V + +QP  + G  L    +QL
Sbjct: 433  IDDYMSRNQSKTIPF-----------RDCKVLKQRPRFVPMKKQPAYIGGDGLELRDYQL 481

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
            ++LNW+   W KS + ILADEMGLGKT+    F++ L+ E +   P L++VPLST+ +W 
Sbjct: 482  DSLNWMAHSWCKSNSCILADEMGLGKTIQTICFLNYLFNEHQLYGPFLLVVPLSTLTSWQ 541

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
             E  LWAP +NVV Y G   +R +IR +EW  S    L       KFN+LLTTYE++L D
Sbjct: 542  REIHLWAPQMNVVVYLGDISSRNMIRTHEWMHSHSKRL-------KFNILLTTYEILLKD 594

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
             S L  V W  + VDE HRLKN  S L+  +  F   HR+L+TGTPLQN++ E+++LL+F
Sbjct: 595  KSFLGSVNWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHF 654

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            + P  F S   FE++      +     L K + P +LRR+KKD  +++P K E+++ VE+
Sbjct: 655  IMPEKFHSWELFEDEHGKGRDSGYTS-LHKELEPFLLRRVKKDVEKSLPAKVEQILRVEM 713

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF 1061
            S+IQ +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI   E +    EF
Sbjct: 714  SAIQKQYYKWILTRNYKALSKGTKG-STSGFLNIMMELKKCCNHCYLIKPPEDN----EF 768

Query: 1062 LHEMR-----IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL-NIEFGPKT 1115
            L+        I++S KL LL  +L  L + GHRVLIFSQM ++LDIL +YL + +F    
Sbjct: 769  LNRAEALQHLIRSSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLRSRQF---L 825

Query: 1116 YERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHA 1174
            ++R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  
Sbjct: 826  FQRLDGSIKGEMRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQN 885

Query: 1175 DIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------S 1224
            D+QA  RAHRIGQ +++ +YRLV + SVEE I++ AKKK++LD L + +          +
Sbjct: 886  DLQAQARAHRIGQKRQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHT 945

Query: 1225 GS---------QKEVEDILRWGTEELF 1242
            GS         ++E+  IL++G EELF
Sbjct: 946  GSAPSSSAPFNKEELSAILKFGAEELF 972


>gi|119603203|gb|EAW82797.1| chromodomain helicase DNA binding protein 9, isoform CRA_e [Homo
            sapiens]
          Length = 2823

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 249/584 (42%), Positives = 345/584 (59%), Gaps = 48/584 (8%)

Query: 681  FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE 740
             VKW  LPY++ TWE  ++  L K      L      Q  + D    + P        S 
Sbjct: 739  LVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------QASRPDTRRLDRP-------PSN 785

Query: 741  IVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLY 799
            I    +Q  + K G  L  +QLE LNWL   W+  +N ILADEMGLGKT+ +  F+  + 
Sbjct: 786  IWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL 845

Query: 800  CEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL 859
                 + P L++ PLST+ NW  EF  W  ++NVV YHG   +R +I+QYE +  D    
Sbjct: 846  LT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGR 903

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
              +  +Y+F  ++TT+EMIL     L  + W  +++DE HRLKN   KL   L   + +H
Sbjct: 904  IIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEH 962

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            +VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F DL T ++V++L+ ++ P MLR
Sbjct: 963  KVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLR 1022

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIV--- 1036
            RLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+  L    KG  Q ++ N+V   
Sbjct: 1023 RLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL---SKGAGQTNVPNLVNTM 1079

Query: 1037 MQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKE 1086
            M+LRK CNHPYLI G E           +  + +F  +  I+++ KL L+  +L  +   
Sbjct: 1080 MELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAG 1139

Query: 1087 GHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFL 1145
            GH+VLIFSQM + LDILEDYL  +     YER+DG V    RQAAI RF++ D  RFVFL
Sbjct: 1140 GHKVLIFSQMVRCLDILEDYLIHKR--YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1197

Query: 1146 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEER 1205
            L TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ+K + VYRLV R S E  
Sbjct: 1198 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYERE 1257

Query: 1206 ILQLAKKKLMLDQLFV--------NKSG----SQKEVEDILRWG 1237
            +   A  KL LD+  +        N  G    S+KE+ED+LR G
Sbjct: 1258 MFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRG 1301


>gi|440295604|gb|ELP88516.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
            invadens IP1]
          Length = 1745

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 293/775 (37%), Positives = 406/775 (52%), Gaps = 117/775 (15%)

Query: 578  KDVDVGKKTSGSVAKRVQEPAVTESA-----QVKG---KAVSYEFLVKWVGKSNIHNSWI 629
            +D DV KK    V KR   P  TE +      V+G        E+LVK+  KS     WI
Sbjct: 427  EDQDVEKKRC-PVVKREFSPFTTEKSVEKLLNVRGGVEAGTEEEYLVKYNNKSYRDVEWI 485

Query: 630  PESQL-KVLAKRKLENYKAKYG------------TTVINICDERWKQPQRVISLRSSKDG 676
             ES L +++ + +++ +K K+             TTV  I  E+              DG
Sbjct: 486  KESILSQMIPQLRIKRFKTKFQFDGEEDPFPMEYTTVERILFEK------------EIDG 533

Query: 677  TREAFVKWTG-LPYDECTWEKL----DEPALEKYSHLTDLFVQFERQTLKKDASEDELP- 730
             +   VKW G L Y E TWEK     D+  L +Y              +  D S  E P 
Sbjct: 534  VKYCLVKWGGGLSYTEATWEKESDVGDDVRLNEYKKFH----------IMPDPSTIEAPL 583

Query: 731  -------RGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEM 783
                   R K D  +                 L  +Q+E LNWL   W + K  ILADEM
Sbjct: 584  PDRIWERRMKSDVYRH-------------NNTLREYQIEGLNWLVFNWCRGKGCILADEM 630

Query: 784  GLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKAR 843
            GLGKTV   AF+  L    K   P L++ PLST+ +W  E   W   +NVV Y G  + R
Sbjct: 631  GLGKTVQVVAFMEHLRTFQKLPGPFLIVTPLSTLEHWRREICEWT-EMNVVVYLGSKENR 689

Query: 844  AIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKN 903
             +I+ YEW   D D   + +   KF+ L+TTYEM++ D   L+ + W+V+VVDE  RLKN
Sbjct: 690  QMIQHYEWFYLDKDE-KELSKQIKFHALVTTYEMVMNDYEALQQIHWQVIVVDEAQRLKN 748

Query: 904  SGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTT 963
              SKL   L+     H++LLTGTP+QNN  E++ LLN++ P  FPS+ +F +KF +  T 
Sbjct: 749  KQSKLNRTLSEIPAYHKILLTGTPIQNNTDELWTLLNYVNPIGFPSIEAFHQKFGEGKTA 808

Query: 964  QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN- 1022
             +V+ L+  + P++LRR+K++  ++IPPK E ++ VEL+ +Q +YYRA+  KN + L   
Sbjct: 809  DEVKSLQVEIQPYLLRRVKQNVEKSIPPKEEILIEVELTLVQKKYYRALYEKNREFLNKG 868

Query: 1023 -IGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP-----DSGSVEFLHEMRIKASAKLTLL 1076
             +G+ V    +LN++MQLRKVCNHP+LIPG E      +    +F     +K S K+ LL
Sbjct: 869  CVGQNVPH--LLNLMMQLRKVCNHPFLIPGVEEKEVGGNYDDPDFYESELVKCSGKMVLL 926

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              +L  L ++ HRVLIFSQ+  +LD++E YL   F   TYER+DGSV   DRQ AI RF 
Sbjct: 927  DKLLPKLKQDDHRVLIFSQLKGVLDVIEKYLG--FKKYTYERLDGSVKSNDRQNAIDRFM 984

Query: 1137 QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
            +   RFVFLL TR+ G+GINL+ ADTVIIYDSD+NP  D+QA  R HRIGQ K + VYRL
Sbjct: 985  KG-DRFVFLLCTRAGGIGINLSEADTVIIYDSDWNPQNDLQAQARCHRIGQKKEVKVYRL 1043

Query: 1197 VVRASVEERILQLAKKKLMLDQ-LFVNKSGSQKEVE--------DILRWGTEELFNDSPG 1247
            V + + E  + + A  KL LDQ +  N +   KE E        D+L++G   L  D   
Sbjct: 1044 VSKNTYERYMFERASMKLGLDQAILSNINHESKETEKMSKDDIADLLKYGAYGLLKDEDE 1103

Query: 1248 INGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGSTKIVWDENAIAR 1302
             N  + GE          D++Q   KR               S K+VW+  + A+
Sbjct: 1104 KNSNNFGE---------EDIDQIMEKR---------------SKKVVWNGESAAQ 1134


>gi|432889219|ref|XP_004075171.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Oryzias
            latipes]
          Length = 1684

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 268/686 (39%), Positives = 394/686 (57%), Gaps = 83/686 (12%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYK-----------------AKYGTT 652
            ++L+KW   ++IHN+W  E  LK   V   +KL+N+K                  +Y   
Sbjct: 309  QYLIKWKNWAHIHNTWETEETLKQQNVRGMKKLDNFKKKEQEQKKWLKMASPEDVEYFNC 368

Query: 653  VINICDERWKQPQ---RVI--SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
               + D+   Q Q   R+I  S + S  G  +   KW GLPY EC+WE       +    
Sbjct: 369  QEELIDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWEDGALIGKKFQKR 428

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDC----QQSEIVALTEQPEELKGGAL--FPHQL 761
            + D   + + +T+              DC    Q+   V +  QP  + G  L    +QL
Sbjct: 429  IDDYMCRNQSKTIPSR-----------DCKVLKQRPRFVPMKRQPSYIGGDGLELRDYQL 477

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
            ++LNW+   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W 
Sbjct: 478  DSLNWMAHSWSKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTVTSWQ 537

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
             E  LWAP +NVV Y G   +R +IR +EW       ++  +   KFN+LLTTYE++L D
Sbjct: 538  REIQLWAPQMNVVVYLGDISSRNMIRTHEW-------IHLHSRRLKFNILLTTYEILLKD 590

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
             + L  V W  + VDE HRLKN  S L+  +  F   HR+L+TGTPLQN++ E+++LL+F
Sbjct: 591  KTFLGNVNWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHF 650

Query: 942  LQPASFPSLSSFEE---KFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVP 998
            + P  F S   FE    K  D   T     L K + P +LRR+KKD  +++P K E+++ 
Sbjct: 651  IMPDKFHSWEHFEADHGKGRDSGYTS----LHKELEPFLLRRVKKDVEKSLPAKVEQILR 706

Query: 999  VELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI-PGTEPDSG 1057
            VE++++Q +YY+ +LT+NY+ L    KG +    LN++M+L+K CNH YLI P  +    
Sbjct: 707  VEMTAVQKQYYKWILTRNYKALSKGTKG-STSGFLNVMMELKKCCNHCYLIKPPDDEFLS 765

Query: 1058 SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL-NIEFGPKTY 1116
             VE L ++ I++S KL LL  +L  L + GHRVLIFSQM ++LDIL DYL + +F    +
Sbjct: 766  KVEAL-QLLIRSSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILADYLRSRQF---LF 821

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            +R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D
Sbjct: 822  QRLDGSIKGEMRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQND 881

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS--------- 1226
            +QA  RAHRIGQ +++ +YRLV R SVEE I++ AKKK++LD L + +  +         
Sbjct: 882  LQAQARAHRIGQKRQVNIYRLVTRGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLNTG 941

Query: 1227 ----------QKEVEDILRWGTEELF 1242
                      ++E+  IL++G EELF
Sbjct: 942  AAPSSSAPFNKEELSAILKFGAEELF 967


>gi|444725589|gb|ELW66150.1| Chromodomain-helicase-DNA-binding protein 9 [Tupaia chinensis]
          Length = 1636

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 249/585 (42%), Positives = 345/585 (58%), Gaps = 48/585 (8%)

Query: 681  FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE 740
             VKW  LPY++ TWE  ++  L K      L      Q  + D    + P        S 
Sbjct: 722  LVKWCSLPYEDSTWELKEDVDLAKIEEFEQL------QASRPDTRHLDRP-------PSN 768

Query: 741  IVALTEQPEELKGG-ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLY 799
            I    +Q  + K G  L  +QLE LNWL   W+  +N ILADEMGLGKT+ +  F+  + 
Sbjct: 769  IWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL 828

Query: 800  CEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNL 859
                 + P L++ PLST+ NW  EF  W  ++NVV YHG   +R +I+QYE +  D    
Sbjct: 829  LT-GIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGR 886

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
              +  +Y+F  ++TT+EMIL     L  + W  +++DE HRLKN   KL   L   + +H
Sbjct: 887  IIR-GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEH 945

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            +VLLTGTPLQN + E+++LL+FL+P  FPS S+F ++F DL T ++V++L+ ++ P MLR
Sbjct: 946  KVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLR 1005

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIV--- 1036
            RLK+D  + + PK E ++ VEL++IQ +YYRA+L KN+  L    KG  Q ++ N+V   
Sbjct: 1006 RLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL---SKGAGQTNVPNLVNTM 1062

Query: 1037 MQLRKVCNHPYLIPGTEP----------DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKE 1086
            M+LRK CNHPYLI G E           +  + +F  +  I+++ KL L+  +L  +   
Sbjct: 1063 MELRKCCNHPYLIKGAEEKILGEFRDTYNPTASDFHLQAMIQSAGKLVLIDKLLPKMKAG 1122

Query: 1087 GHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFL 1145
            GH+VLIFSQM + LDILEDYL  +     YER+DG V    RQAAI RF++ D  RFVFL
Sbjct: 1123 GHKVLIFSQMVRCLDILEDYLIHK--RYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1180

Query: 1146 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEER 1205
            L TR+ GLGINL  ADT II+DSD+NP  D+QA  R HRIGQ+K + VYRLV R S E  
Sbjct: 1181 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYERE 1240

Query: 1206 ILQLAKKKLMLDQLFV-------NKSG-----SQKEVEDILRWGT 1238
            +   A  KL LD+  +       N  G     S+KE+ED+LR G 
Sbjct: 1241 MFDRASLKLGLDKAVLQSMSGRENNVGGIQQLSKKEIEDLLRRGA 1285


>gi|407037695|gb|EKE38751.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
            nuttalli P19]
          Length = 1627

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 277/686 (40%), Positives = 382/686 (55%), Gaps = 49/686 (7%)

Query: 581  DVGKKTSGSVAKRVQEP----AVTESAQVKGK--AVSYEFLVKWVGKSNIHNSWIPESQL 634
            D  KK S ++ K ++EP     V +   +KG       EF+VK+  +S     W+    L
Sbjct: 479  DSEKKKSTTIKKFLKEPTTEKVVEKILSMKGSDDLDEAEFMVKYKNRSYRDVEWVKGKDL 538

Query: 635  -KVLAKRKLENYKAKYGTTVIN-ICDERWKQPQRVISLRSSKDGTREAFVKWTG-LPYDE 691
             +V+   +L+ + +KY     + I    +   +R++      +G     VKW G L Y E
Sbjct: 539  SEVIQPTRLKRFASKYHYNEEDDIFPPEYTLVERIL-FEKEINGEEYCLVKWGGGLSYLE 597

Query: 692  CTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
             TWEK  E   +      D   ++++  +  D S  E P          +  + E P   
Sbjct: 598  ATWEKKSEIKDQ------DKLDEYKKFHIPPDPSTVEPPLP------DRLWQVQEHPYR- 644

Query: 752  KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVL 811
                L  +Q+E LNWL   W + K  ILADEMGLGKTV   AF   L    K   P LV+
Sbjct: 645  HDNTLRSYQMEGLNWLVFNWCRGKGCILADEMGLGKTVQVVAFFEHLRSFQKLPGPFLVV 704

Query: 812  VPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVL 871
             PLST+ +W  E   W  ++NVV Y G  + R +I+ YEW   + D   + +   KF+ L
Sbjct: 705  TPLSTLEHWRREINEWT-DMNVVVYLGTKENRQLIQHYEWFYLNKDE-KEISKQIKFHAL 762

Query: 872  LTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNN 931
            +TTYEMI++D   L  + W+V VVDE  RLKN  SKL   L      H++LLTGTP+QNN
Sbjct: 763  ITTYEMIMSDYEILSQIHWQVTVVDEAQRLKNKSSKLNKTLTEIPSYHKILLTGTPIQNN 822

Query: 932  IGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPP 991
            I E++ LLNF+ P +FPSL +F EKF D  T   V+ L+  + P++LRR+K +  ++IPP
Sbjct: 823  IDELWTLLNFINPENFPSLENFHEKFGDAKTADGVKALQTEIQPYLLRRVKGNVEKSIPP 882

Query: 992  KTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG 1051
            K E ++ VEL+ +Q +YYRA+  KN + L     G     + N+++QLRKVCNHP+LIPG
Sbjct: 883  KEEILIEVELTLVQKKYYRALYDKNREFLNKGCVGSNVPHLQNLMIQLRKVCNHPFLIPG 942

Query: 1052 TE------PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILED 1105
             E      PD     F  E+ IK+S K+ LL  +L  L  +GH+VLIFSQ+  +LDILE 
Sbjct: 943  VEEKEIANPDDPE-SFAQEL-IKSSGKMVLLDKLLPKLNADGHKVLIFSQLKGVLDILEK 1000

Query: 1106 YLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVII 1165
            YL+  +   TYER+DGSV   DRQ AI RF + + RFVFLL TR+ G+GINL+ ADTVII
Sbjct: 1001 YLS--YKKYTYERLDGSVRSNDRQNAIDRFMKGE-RFVFLLCTRAGGIGINLSEADTVII 1057

Query: 1166 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF----- 1220
            YDSD+NP  D+QA  R HRIGQ K + VYRLV + + E  + + A  KL LDQ       
Sbjct: 1058 YDSDWNPQNDLQAQARCHRIGQKKEVKVYRLVSKNTYERYMFERASMKLGLDQAILSNIN 1117

Query: 1221 -----VNKSGSQKEVEDI---LRWGT 1238
                 VNK   +   EDI   L++G 
Sbjct: 1118 NTPGEVNKESEKLSKEDITSLLKYGA 1143


>gi|348676368|gb|EGZ16186.1| hypothetical protein PHYSODRAFT_560689 [Phytophthora sojae]
          Length = 1860

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 270/720 (37%), Positives = 384/720 (53%), Gaps = 98/720 (13%)

Query: 582  VGKKTSGSVAKRVQEPAVTESAQVKG---------KAVSYEFLVKWVGKSNIHNSWIPES 632
            V +K  G   + V+EPA T +A             K    E+L+KW G + +H SW  + 
Sbjct: 252  VIEKIMGVRQREVEEPAPTPAADSASANLFANRPTKTSITEYLIKWKGFAYMHASWETKQ 311

Query: 633  QL----KVLAKRKLENYKAK-------------------YGTTVINICDERWKQPQRVIS 669
             L     +  K+K++ +  K                        +   +  + +  R+I+
Sbjct: 312  VLLDLDPLTNKQKIKRFHEKEQHRLHHPHRQTGDLDEDSLAVDELEYFNPEYLEIHRIIA 371

Query: 670  LRSSK--------------DGTREAFVKWTGLPYDECTWEKL----DEPALEKYSHLTDL 711
             R                 DG R  ++KW  LPY + TWE+     D+ AL KY   T +
Sbjct: 372  HRKDTPMPADPNFPDAPVDDGMR-YYIKWRILPYTDATWERACDIKDDAALAKYK--TSI 428

Query: 712  FVQFE-------RQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEAL 764
             V  E       R T+++    DE PR   D                +  +L  +QLE L
Sbjct: 429  VVPDEEVWKPRPRPTIREYRKLDESPRFGED----------------QSLSLRAYQLEGL 472

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL--PCLVLVPLSTMPNWLA 822
            NWL   W+  +  ILADEMGLGKT+   +F+S L  + K K+  P L++ PLS +  W  
Sbjct: 473  NWLIWNWYNERPSILADEMGLGKTIQTLSFLSRLRDDPKIKIRGPFLIVAPLSLIVQWQN 532

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E  +W   +N V YHG + +R IIR +E+H  D +    K   Y+FN+L+TTYE+ + D 
Sbjct: 533  ECEMWT-TMNCVVYHGNSGSRDIIRDFEFHYLDENLRPDKKKPYRFNILVTTYEVAIKDI 591

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L  + W  LVVDE HRLKN  S+L   + S    H VLLTGTPLQN   E++ LLNFL
Sbjct: 592  AALSKIHWRCLVVDEAHRLKNQSSRLVEQMRSLRRDHCVLLTGTPLQNKTEELWALLNFL 651

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
               SFPS++ F +KF DL   Q+V +L K++ P++LRR+K+D  +++PPK E +V VEL+
Sbjct: 652  DGKSFPSVADFLDKFGDLHEAQQVADLHKMLKPYLLRRVKEDVEKSLPPKEETIVEVELT 711

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL 1062
             +Q ++YRA+  KN   L   G      +++N++M+LRK CNHPYL  G E      E L
Sbjct: 712  PVQKQWYRAIYEKNTAFLNRGGNPRNVPNLMNVMMELRKCCNHPYLNNGVE------EIL 765

Query: 1063 ----------HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFG 1112
                      HEM +K   K+ L+  +L  L   GH+VLIFSQM ++LDI+EDYL   F 
Sbjct: 766  NEGLTTDAQRHEMMVKCCGKMVLIDKLLPRLNDGGHKVLIFSQMVRVLDIIEDYLR--FC 823

Query: 1113 PKTYERVDGSVSVGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFN 1171
               YER+DG++   DRQAA+ RF   +  RFV LLST++ GLG+NL  ADTVII+DSD+N
Sbjct: 824  GYLYERLDGNIRGNDRQAAVDRFVKPEYKRFVMLLSTKAGGLGLNLTAADTVIIFDSDWN 883

Query: 1172 PHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVE 1231
            P  D+QA  RAHRIGQ+  + +YRL+ R + E  +   A  KL LD+  +     + E E
Sbjct: 884  PQNDLQAQARAHRIGQTHSVKIYRLITRKTYEMHMFHKASLKLGLDKAVLTHMRRENEEE 943


>gi|340710938|ref|XP_003394039.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 1-like [Bombus terrestris]
          Length = 1796

 Score =  438 bits (1126), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 268/719 (37%), Positives = 408/719 (56%), Gaps = 80/719 (11%)

Query: 582  VGKK-TSGSVAK--RVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLK--- 635
            VGKK  +G+V     ++E        +  +    ++ +KW G S+IHN+W  E  LK   
Sbjct: 249  VGKKGVTGNVTTIYAIEENGNPNPEDLSNEETELQYSIKWKGWSHIHNTWESEESLKAQK 308

Query: 636  ----------VLAKRKLENYKAKYGTTVINICD----------ERWKQPQRVISLRSSKD 675
                      +  +R+++ ++   G   I+  +          + +   +R+I+  +  D
Sbjct: 309  VKGLKKLDNFIKREREIKQWRDYAGPEDIDYFECQLELQQDLLKSYNNVERIIAEYNKPD 368

Query: 676  GTR-EAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKG 734
                + + KW  LPY E TWE      ++K+      F   ER+  K+  S+        
Sbjct: 369  SDHPDYYCKWESLPYAEATWED-GVLIVKKWPEKIKEFR--EREESKRTPSKH------- 418

Query: 735  DCQ----QSEIVALTEQPEELKGG---ALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
             C+    + +   L  QP+ +  G    L  +Q++ LNW+   W K  +VILADEMGLGK
Sbjct: 419  -CKVLKSRPKFHQLKGQPDYMGKGRDLTLRDYQMDGLNWMIHSWCKENSVILADEMGLGK 477

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            T+    F+  L+   +   P L++VPLSTM +W  E + WAP++N V Y G   +R +IR
Sbjct: 478  TIQTICFLYYLFHTHQLYGPFLLVVPLSTMTSWQREMSQWAPDMNFVTYLGDVTSRNVIR 537

Query: 848  QYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSK 907
            +YEW  S        +   KFN +LTTYE++L D + L  + W VL+VDE HRLKN  S 
Sbjct: 538  EYEWCYS--------SKRLKFNAILTTYEIVLKDKAFLGALNWAVLLVDEAHRLKNDDSL 589

Query: 908  LFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVE 967
            L+  L  F   HR+L+TGTPLQN++ E++ LL+F+ P  F S   FE K +D    +   
Sbjct: 590  LYKALAEFHTNHRLLITGTPLQNSLKELWALLHFIMPTKFNSWEEFE-KEHDNAAQKGYS 648

Query: 968  ELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGV 1027
            +L K + P +LRR+KKD  +++P K E+++ VE++S+Q +YY+ +LTKNY  LR   KG 
Sbjct: 649  KLHKQLEPFILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYNALRKGVKG- 707

Query: 1028 AQQSMLNIVMQLRKVCNHPYLIPGTEPD--SGSVEFLHEMRIKASAKLTLLHSMLKVLYK 1085
            +  + LNIV++ +K CNH +L   TE +    + ++L ++ I+ S KL LL  +L  L +
Sbjct: 708  STMTFLNIVIEXKKCCNHAFLTKPTESERKDNNEDYLQQL-IRGSGKLVLLDKLLVRLRE 766

Query: 1086 EGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVF 1144
             GHRVLIFSQM ++LDIL +YL  +  P  ++R+DGS+    R+ A+  FN + S+ F F
Sbjct: 767  TGHRVLIFSQMVRMLDILGEYLQKKHFP--FQRLDGSIKGELRKQALDHFNAEGSQDFCF 824

Query: 1145 LLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEE 1204
            LLSTR+ GLGINLATADTVII+DSD+NP  D+QA  RAHRIGQ  ++ +YRLV + SVEE
Sbjct: 825  LLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEE 884

Query: 1205 RILQLAKKKLMLDQLFV-------------------NKSGSQKEVEDILRWGTEELFND 1244
             I++ AK+K++LD L +                   N   +++++  IL++G E+LF D
Sbjct: 885  EIVERAKQKMVLDHLVIQRMDTTGRTVLDKKXAGTNNNPFNKEDLNAILKFGAEDLFKD 943


>gi|332022432|gb|EGI62740.1| Chromodomain-helicase-DNA-binding protein 7 [Acromyrmex echinatior]
          Length = 4236

 Score =  438 bits (1126), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 287/754 (38%), Positives = 414/754 (54%), Gaps = 91/754 (12%)

Query: 542  LGERNDKMVV----------EDADVSLRDNEGLTV--SEIHITCESTDKDV-----DVGK 584
            +G+R  K VV          E+AD    DN+  T   S      E+T+K+      D GK
Sbjct: 1500 MGKREVKPVVPKVEPPIEKNENADKEESDNKDATSDDSVKKEGTENTEKEAKTETKDEGK 1559

Query: 585  KTSGSV----AKRVQEPA-------VTESAQVKGKAVSYE-FLVKWVGKSNIHNSWIPES 632
              + SV    AK+V+EP+        T   + K + V  E + VK+   S +H  W  E 
Sbjct: 1560 SETDSVKKEDAKKVEEPSSDSKPVETTAIVETKPQFVEVEEYFVKYRNFSYLHCEWRTEE 1619

Query: 633  QL-----KVLAKRKLENYKAKYGTTVINICDERWKQPQ-----RVISLRSSKDGT----- 677
            ++     ++ AK K    K +  T +    ++    P      RV+   +  D T     
Sbjct: 1620 EMYKGDKRIQAKLKRFKQKQQQNTNIFENTEDDPFNPDFVEVDRVLDEATHNDPTTGETV 1679

Query: 678  REAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ 737
            R   VKW  L Y++ TWE  ++   EK +     FV+F +   K    E   P+ K +  
Sbjct: 1680 RHFLVKWRSLQYEDSTWELEEDVDPEKIAQ----FVKFNKVPPK----EQWKPKKKPNA- 1730

Query: 738  QSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISS 797
             +  V L E P       L P+QLE LNWL   W+   N ILADEMGLGKT+ +  F+ +
Sbjct: 1731 -AAWVKLEESPVYKSNNILRPYQLEGLNWLLFSWYNGHNCILADEMGLGKTIQSLTFVDA 1789

Query: 798  LYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPD 857
            +Y ++  + P L++ PLST+PNW  EF  W  ++NVV YHG A +R ++++YE +  +  
Sbjct: 1790 VY-KYGIRGPFLIIAPLSTIPNWQREFESWT-DMNVVVYHGSAASRTMLQEYEVYYKNEK 1847

Query: 858  NLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSF 917
                K    KFNVL+TT+E+I+ D + LRG  W + V+DE HRLKN   KL   L   + 
Sbjct: 1848 GQQIK-DLVKFNVLITTFEIIITDFNELRGYNWRLCVIDEAHRLKNRNCKLLEGLRQLNL 1906

Query: 918  QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHM 977
            +HRVLL+GTPLQNN+ E+++LLNFL+P  F S  +F ++F +L++  +V +L+ L+ P M
Sbjct: 1907 EHRVLLSGTPLQNNVNELFSLLNFLEPQQFASNEAFLKEFGNLSSEGEVHKLQLLLKPMM 1966

Query: 978  LRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVM 1037
            LRRLK+D  +++ PK E +V VEL++IQ +YYR +L +N+  L          +++N +M
Sbjct: 1967 LRRLKEDVEKSLAPKEETVVEVELTNIQKKYYRGILERNFSFLAKGTTSANIPNLMNTMM 2026

Query: 1038 QLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMT 1097
            +LRK C H +L                  + +S K+ L+  +L  L   GHRVLIFSQM 
Sbjct: 2027 ELRKCCIHLFL------------------VNSSGKMVLIDKLLPKLKASGHRVLIFSQMV 2068

Query: 1098 KLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGIN 1156
            K LD+LEDYL  +  P  YER+DG +    RQAAI R+++ D  RFVFLL T++ GLGIN
Sbjct: 2069 KCLDLLEDYLLYKKYP--YERIDGRIRGNLRQAAIDRYSKPDSDRFVFLLCTKAGGLGIN 2126

Query: 1157 LATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLML 1216
            L  ADTVIIYDSD+NP  D+QA  R HRIGQ K + VYRL+ R + E  +   A  KL L
Sbjct: 2127 LTAADTVIIYDSDWNPQNDLQAQARCHRIGQQKMVKVYRLLCRNTYEREMFDKASLKLGL 2186

Query: 1217 DQLFV-------------NKSGSQKEVEDILRWG 1237
            D+  +             NK  ++KE+ED+L+ G
Sbjct: 2187 DKAILQSMNTSQGGKDPSNKQLTKKEIEDLLKKG 2220


>gi|281200598|gb|EFA74816.1| chromo domain-containing protein [Polysphondylium pallidum PN500]
          Length = 2720

 Score =  438 bits (1126), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/556 (42%), Positives = 347/556 (62%), Gaps = 34/556 (6%)

Query: 681  FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE 740
             VKW GLPY++ TWE   E AL   +    +   +E QT      +      K     ++
Sbjct: 753  LVKWKGLPYEKTTWET--ESALSSPADKQAIQAYYELQTTGGGTKKLVKRPSKMPPFDNQ 810

Query: 741  IVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYC 800
            +V     P+  +  +L   Q+E   WL  CW+  ++ +LADEMGLGKT+   AF+  +  
Sbjct: 811  LV-----PKFNESLSLKQFQVEGFLWLSYCWYHERSSLLADEMGLGKTIQTIAFLQYISQ 865

Query: 801  EFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN 860
                K P +V+ PLST+ NW  E   W  N+ V+ ++G  +AR+ +++YEW   D     
Sbjct: 866  TVGIKGPFMVVAPLSTLGNWHKEIIKWT-NMRVLVFYGTQEARSTLKKYEWKRQD----- 919

Query: 861  KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHR 920
                SY F ++LTTYE ++ + S +  VPW ++V+DEGHR+KN  SK+ + L S   +H 
Sbjct: 920  ---KSYMFEIMLTTYETVMTEHSDIVKVPWRIMVLDEGHRIKNVNSKVLTKLKSIRSEHT 976

Query: 921  VLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRR 980
            ++LTGTPLQN++ E++ +LNFL    F S + F  +F+DL    +V+ L  L++P++LRR
Sbjct: 977  LILTGTPLQNDMKELWTMLNFLDSRKFNSCTEFLAEFSDLKEESQVQRLHHLLSPYLLRR 1036

Query: 981  LKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSML----NIV 1036
            +K+D   +IP K E ++ VELSS Q  YYRA+L KN + L    +GV  +S L    NI+
Sbjct: 1037 MKEDVELSIPIKEETVIQVELSSTQKTYYRAILEKNREFL---ARGVKSKSNLPKLTNIM 1093

Query: 1037 MQLRKVCNHPYLIPGTEPDS-------GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHR 1089
            +Q+RKVCNHP+LI G E D+        + E + E+ I++S+KL L+  +L+ L  EGH+
Sbjct: 1094 IQIRKVCNHPFLILGAE-DTIIRQEKLKTEEQISELLIRSSSKLVLVDKLLQRLKAEGHK 1152

Query: 1090 VLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRF-NQDKSRFVFLLST 1148
            VLIFSQM + L+ILEDYL+  +    YER+DGSV    RQA+I RF +++  RFVFLLST
Sbjct: 1153 VLIFSQMVESLNILEDYLH--YREYLYERLDGSVKSEVRQASIERFMDKESDRFVFLLST 1210

Query: 1149 RSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQ 1208
            RS G+GINL +ADTVI++DSD+NP +D+QA  R HRIGQ+  + VYRL+ R + E+ + +
Sbjct: 1211 RSGGVGINLTSADTVILFDSDWNPQSDLQAQARCHRIGQTSNVKVYRLITRNTYEQYLFE 1270

Query: 1209 LAKKKLMLDQLFVNKS 1224
            +A KKL+LD + +N +
Sbjct: 1271 VATKKLLLDHIVLNNA 1286


>gi|66800671|ref|XP_629261.1| chromo  domain-containing protein [Dictyostelium discoideum AX4]
 gi|60462656|gb|EAL60858.1| chromo  domain-containing protein [Dictyostelium discoideum AX4]
          Length = 3071

 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 244/571 (42%), Positives = 350/571 (61%), Gaps = 39/571 (6%)

Query: 673  SKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPR- 731
            SK  T     KW  LP+++ TWE  DE  L        +  QF    L  D  +  + R 
Sbjct: 822  SKKMTTFYLCKWKTLPHEKSTWE--DENILITEEDQAAI-KQFNANQLLLDQPKKYVNRP 878

Query: 732  GKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSA 791
             K     +E+V     P+     +L   Q+E   WL  CW+  ++ +LADEMGLGKT+ +
Sbjct: 879  TKLPIFNNELV-----PKFQDNLSLKEFQVEGFLWLSYCWYHCRSSLLADEMGLGKTIQS 933

Query: 792  CAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEW 851
             AF+  L      K P LV+ PLST+ NW  E   W   +  + ++G  + R  I +YE+
Sbjct: 934  IAFLQYLSQSVGIKGPFLVVAPLSTLGNWHKEILKWT-KMKTLVFYGSQETRGFISKYEF 992

Query: 852  HASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSL 911
               D         +Y F VLLTTYE I++D S    VPW  L++DEGHR+KN  SK+ S 
Sbjct: 993  KHKD---------TYLFEVLLTTYETIMSDHSSFVRVPWRALILDEGHRIKNDKSKVLSK 1043

Query: 912  LNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKK 971
            L S   +H ++LTGTPLQN++ E++ +LNFL P  F S   F ++++DL    +V +L +
Sbjct: 1044 LKSIKTEHSIILTGTPLQNDMKELWTMLNFLDPDKFNSCQEFLDEYSDLKEESQVSKLHQ 1103

Query: 972  LVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQS 1031
            L++P++LRR+K+D   +IP K E ++ VELSS Q  YYRA+L +N + L    +G+ Q++
Sbjct: 1104 LLSPYLLRRMKEDVELSIPIKEETVIQVELSSTQKTYYRAILERNREFL---SRGIKQKT 1160

Query: 1032 ML----NIVMQLRKVCNHPYLIPGTEPD-------SGSVEFLHEMRIKASAKLTLLHSML 1080
             L    NI++Q+RKVCNHP+LIPG E         +G  E L E+ +K+S+KL L+  +L
Sbjct: 1161 NLPKLSNIMIQIRKVCNHPFLIPGAEESIVKQEKIAGDEE-LGELLVKSSSKLVLVDKLL 1219

Query: 1081 KVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDK- 1139
            + L  EGH+VLIFSQM + L+ILEDYL  ++   TYER+DGS+    RQA+I RF QDK 
Sbjct: 1220 QRLKAEGHQVLIFSQMVESLNILEDYL--QYREYTYERLDGSIKSEVRQASIDRF-QDKG 1276

Query: 1140 -SRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVV 1198
             +RFVFLLSTR+ G+GINL TADTVI++DSD+NP +D+QA  R HRIGQ+  + VYRL+ 
Sbjct: 1277 ANRFVFLLSTRAGGVGINLTTADTVILFDSDWNPQSDLQAQARCHRIGQTNNVKVYRLIT 1336

Query: 1199 RASVEERILQLAKKKLMLDQLFVNKSGSQKE 1229
            R + EE + + A KKL+LD + ++ +  +K+
Sbjct: 1337 RNTYEEYLFECATKKLLLDHIVLSTNKDKKQ 1367


>gi|449550975|gb|EMD41939.1| hypothetical protein CERSUDRAFT_90530 [Ceriporiopsis subvermispora B]
          Length = 1923

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 249/591 (42%), Positives = 357/591 (60%), Gaps = 38/591 (6%)

Query: 680  AFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQ-FERQTLKKDASEDELP-----RGK 733
            AF+KW    Y++ TW   D P  E   H  D FV  FER    +  +  ++P     R K
Sbjct: 831  AFIKWDDRGYEDATW---DSPPREG-EHGYDAFVSAFERFLSARSVTIPQVPKNSSTRVK 886

Query: 734  GDCQQSEIVALTEQPEELKGGAL--FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSA 791
             + ++     L   P+  +  +L   P Q++ +NWL   W   ++ ILADEMGLGKTV  
Sbjct: 887  DEFRKRYAFTLDSPPQLGQADSLRLMPFQIDGVNWLCDNWWNLQHCILADEMGLGKTVQV 946

Query: 792  CAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEW 851
              FI ++  ++KA  P LV+VP ST+ NW+ EF  WAP+L VV ++G  +AR +I+ YE 
Sbjct: 947  ATFIGTIMSKWKA-FPALVVVPNSTITNWVREFERWAPSLRVVPFYGENRAREVIKNYEL 1005

Query: 852  HASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL----RGVPWEVLVVDEGHRLKNSGSK 907
              S+P      T+  K++VL+TTYEMI           R   WEVLVVDEG RLKN  S 
Sbjct: 1006 FHSNP---RSGTTGAKYHVLVTTYEMITNTKEFAPVFKRTPTWEVLVVDEGQRLKNDVSL 1062

Query: 908  LFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVE 967
            LF  L   +  HR+++TGTP+ NNI E++NL+NFL P  +  L +   ++ DL+   K++
Sbjct: 1063 LFKKLKELNTIHRIIMTGTPINNNIRELFNLMNFLNPREWHDLKALSAEYEDLSE-DKIK 1121

Query: 968  ELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGV 1027
            +L   + P+ LRR+K D + ++PPK E ++PV ++ +Q E YR++L++N ++L+ + +G 
Sbjct: 1122 DLHSRLRPYFLRRIKADVL-DLPPKNEVILPVSMTPLQREIYRSILSQNLEVLKTLARGS 1180

Query: 1028 A---------QQSMLNIVMQLRKVCNHPYLIPG-TEPDSGSVEFLHEMRIKASAKLTLLH 1077
                      + +M N++MQLRK   HPYL+    EP     E  HE  I ASAKL LL 
Sbjct: 1181 TGGRVNASGLKTNMNNVLMQLRKCLQHPYLVSDDIEPRGLPREEAHEKLIDASAKLRLLK 1240

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             +L  L+  GHRVL+FSQ +  LDI+ED+LN E G K Y R+DG+     RQ  +  FN+
Sbjct: 1241 VLLPKLWARGHRVLLFSQFSIGLDIVEDFLNGE-GVK-YLRLDGNTKQSLRQKGMDEFNK 1298

Query: 1138 DKSRF-VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
              S   ++LL+TR+ G+GINL +ADTVII+D DFNPH D+QA+ RAHR GQ K +LV++L
Sbjct: 1299 PGSDIPIYLLTTRAGGVGINLWSADTVIIFDPDFNPHQDLQAIARAHRFGQKKTVLVFKL 1358

Query: 1197 VVRASVEERILQLAKKKLMLDQLFVNK---SGSQKEVEDILRWGTEELFND 1244
            +V+ S EERI+Q  KKKL+LD L V K   S   ++V  IL +G   LF++
Sbjct: 1359 MVKESAEERIVQTGKKKLVLDHLIVQKMDDSEGGEDVHSILMFGARTLFDE 1409


>gi|67474889|ref|XP_653178.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica
            HM-1:IMSS]
 gi|56470108|gb|EAL47792.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
            histolytica HM-1:IMSS]
 gi|449706113|gb|EMD46028.1| chromodomain helicase DNA binding protein, putative [Entamoeba
            histolytica KU27]
          Length = 1641

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 277/690 (40%), Positives = 382/690 (55%), Gaps = 57/690 (8%)

Query: 581  DVGKKTSGSVAKRVQEPAVTESAQVKGKAV-------SYEFLVKWVGKSNIHNSWIPESQ 633
            D  KK S ++ K ++EP  TE    K  A+         EF+VK+  +S     W+    
Sbjct: 479  DSEKKKSTTIKKFLKEPT-TEKVVEKILAMKGSDDLDEAEFMVKYKNRSYRDVEWVKGKD 537

Query: 634  L-KVLAKRKLENYKAKYGTTVIN-ICDERWKQPQRVISLRSSKDGTREAFVKWTG-LPYD 690
            L +V+   +L+ + +KY     + I    +   +R++      +G     VKW G L Y 
Sbjct: 538  LSEVIQPTRLKRFASKYHYNEEDDIFPPEYTLVERIL-FEKEINGEEYCLVKWGGGLSYL 596

Query: 691  ECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEE 750
            E TWEK  E   +      D   ++++  +  D S  E P          +  + E P  
Sbjct: 597  EATWEKKSEIKDQ------DKLDEYKKFHIPPDPSTIEPPLP------DRLWQVQEHPYR 644

Query: 751  LKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLV 810
                 L  +Q+E LNWL   W + K  ILADEMGLGKTV   AF   L    K   P LV
Sbjct: 645  -HDNTLRSYQMEGLNWLVFNWCRGKGCILADEMGLGKTVQVVAFFEHLRSFQKLPGPFLV 703

Query: 811  LVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNV 870
            + PLST+ +W  E   W  ++NVV Y G  + R +I+ YEW   + D   + +   KF+ 
Sbjct: 704  VTPLSTLEHWRREINEWT-DMNVVVYLGTKENRQLIQHYEWFYLNKDE-KEISKQIKFHA 761

Query: 871  LLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQN 930
            L+TTYEMI++D   L  + W+V VVDE  RLKN  SKL   L      H++LLTGTP+QN
Sbjct: 762  LITTYEMIMSDYEILSQIHWQVTVVDEAQRLKNKSSKLNKTLTEIPSYHKILLTGTPIQN 821

Query: 931  NIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
            NI E++ LLNF+ P +FPSL +F EKF D  T   V+ L+  + P++LRR+K +  ++IP
Sbjct: 822  NIDELWTLLNFINPENFPSLENFHEKFGDAKTADGVKALQTEIQPYLLRRVKGNVEKSIP 881

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 1050
            PK E ++ VEL+ +Q +YYRA+  KN + L     G     + N+++QLRKVCNHP+LIP
Sbjct: 882  PKEEILIEVELTLVQKKYYRALYDKNREFLNKGCVGSNVPHLQNLMIQLRKVCNHPFLIP 941

Query: 1051 GTE---------PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLD 1101
            G E         P+S + E      IK+S K+ LL  +L  L  +GH+VLIFSQ+  +LD
Sbjct: 942  GVEEKEIANPDDPESYAQEL-----IKSSGKMVLLDKLLPKLNADGHKVLIFSQLKGVLD 996

Query: 1102 ILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATAD 1161
            ILE YL+  +   TYER+DGSV   DRQ AI RF + + RFVFLL TR+ G+GINL+ AD
Sbjct: 997  ILEKYLS--YKKYTYERLDGSVRSNDRQNAIDRFMKGE-RFVFLLCTRAGGIGINLSEAD 1053

Query: 1162 TVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF- 1220
            TVIIYDSD+NP  D+QA  R HRIGQ K + VYRLV + + E  + + A  KL LDQ   
Sbjct: 1054 TVIIYDSDWNPQNDLQAQARCHRIGQKKEVKVYRLVSKNTYERYMFERASMKLGLDQAIL 1113

Query: 1221 ---------VNKSGSQKEVEDI---LRWGT 1238
                     VNK   +   EDI   L++G 
Sbjct: 1114 SNINNTPGEVNKESEKLSKEDITSLLKYGA 1143


>gi|167392422|ref|XP_001740146.1| chromodomain helicase DNA binding protein [Entamoeba dispar SAW760]
 gi|165895824|gb|EDR23413.1| chromodomain helicase DNA binding protein, putative [Entamoeba dispar
            SAW760]
          Length = 1623

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 271/685 (39%), Positives = 383/685 (55%), Gaps = 55/685 (8%)

Query: 584  KKTSGSVAKRVQEPA----VTESAQVKGK--AVSYEFLVKWVGKSNIHNSWIPESQL-KV 636
            KK S ++ K ++EP     V +   +KG       EF+VK+  +S     W+    L +V
Sbjct: 482  KKKSTTIKKFLKEPTTEKIVEKILSMKGSDDLDEAEFMVKYKNRSYRDVEWVKGKDLSEV 541

Query: 637  LAKRKLENYKAKYGTTVIN-ICDERWKQPQRVISLRSSKDGTREAFVKWTG-LPYDECTW 694
            +   +L+ + +KY     + I    +   +R++      +G     VKW G L Y E TW
Sbjct: 542  IQPTRLKRFASKYHYNEEDDIFPPEYTLVERIL-FEKEINGEEYCLVKWGGGLSYLEATW 600

Query: 695  EKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG 754
            EK  E   +      D   ++++  +  D S  E P          +  + E P      
Sbjct: 601  EKKSEIKDQ------DKLDEYKKFHIPPDPSTIEPPLP------DRLWQVQEHPYR-HDN 647

Query: 755  ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPL 814
             L  +Q+E LNWL   W + K  ILADEMGLGKTV   AF   L    K   P LV+ PL
Sbjct: 648  TLRSYQMEGLNWLVFNWCRGKGCILADEMGLGKTVQVVAFFEHLRSFQKLPGPFLVVTPL 707

Query: 815  STMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTT 874
            ST+ +W  E   W  ++NVV Y G  + R +I+ YEW   + D   + +   KF+ L+TT
Sbjct: 708  STLEHWRREINEWT-DMNVVVYLGTKENRQLIQHYEWFYLNKDE-KEISKQIKFHALITT 765

Query: 875  YEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGE 934
            YEMI++D   L  + W+V VVDE  RLKN  SKL   L      H++LLTGTP+QNNI E
Sbjct: 766  YEMIMSDYEILSQIRWQVTVVDEAQRLKNKSSKLNKTLTEIPSYHKILLTGTPIQNNIDE 825

Query: 935  MYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTE 994
            ++ LLNF+ P +FPSL +F EKF D  T   V+ L+  + P++LRR+K +  ++IPPK E
Sbjct: 826  LWTLLNFINPENFPSLENFHEKFGDAKTADGVKALQTEIQPYLLRRVKGNVEKSIPPKEE 885

Query: 995  RMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE- 1053
             ++ VEL+ +Q +YYRA+  KN + L     G     + N+++QLRKVCNHP+LIPG E 
Sbjct: 886  ILIEVELTLVQKKYYRALYDKNREFLNKGCVGSNVPHLQNLMIQLRKVCNHPFLIPGVEE 945

Query: 1054 --------PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILED 1105
                    P+S + E      IK+S K+ LL  +L  L  +GH+VLIFSQ+  +LDILE 
Sbjct: 946  KEIANPEDPESYAQEL-----IKSSGKMVLLDKLLPKLNTDGHKVLIFSQLKGVLDILEK 1000

Query: 1106 YLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVII 1165
            YL+  +   TYER+DGSV   DRQ AI RF + + RFVFLL TR+ G+GINL+ ADTVII
Sbjct: 1001 YLS--YKKYTYERLDGSVRSNDRQNAIDRFMKGE-RFVFLLCTRAGGIGINLSEADTVII 1057

Query: 1166 YDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---- 1221
            YDSD+NP  D+QA  R HRIGQ K + VYRLV + + E  + + A  KL LDQ  +    
Sbjct: 1058 YDSDWNPQNDLQAQARCHRIGQKKEVKVYRLVSKNTYERYMFERASMKLGLDQAILSNIN 1117

Query: 1222 ---------NKSGSQKEVEDILRWG 1237
                     N+  S++++  +L++G
Sbjct: 1118 NTPGEVNKENEKLSKEDITSLLKYG 1142


>gi|328868264|gb|EGG16642.1| chromo domain-containing protein [Dictyostelium fasciculatum]
          Length = 2319

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/510 (44%), Positives = 337/510 (66%), Gaps = 32/510 (6%)

Query: 750  ELKGG-ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPC 808
            + KG  +L   Q+E   WL   W+  ++ +LADEMGLGKT+ + AF++ L      K P 
Sbjct: 582  KFKGSLSLKEFQVEGFLWLSYNWYHERSSLLADEMGLGKTIQSIAFLTYLSQSVGIKGPF 641

Query: 809  LVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKF 868
            +V+ PLST+ NW  E   W  ++ V+ ++G  + RA  ++YEW   D          Y+F
Sbjct: 642  MVVAPLSTLGNWQKEILKWT-DMRVLVFYGTQETRAFQKKYEWKRKD-------KGVYQF 693

Query: 869  NVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPL 928
             +LLTTYE ++A+   L  + W  LV+DEGHR+KN+ SK+ S L S   +H V+LTGTPL
Sbjct: 694  EILLTTYETVMAEHQDLVKINWRALVLDEGHRIKNTQSKVLSKLKSIKTEHSVILTGTPL 753

Query: 929  QNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQN 988
            QN++ E++ +LNFL P  F S + F ++F+DL    +V+ L +++AP++LRR+K+D   +
Sbjct: 754  QNDMKELWTMLNFLDPDKFASSTQFLDEFSDLKEESQVQRLHQILAPYLLRRMKEDVELS 813

Query: 989  IPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSML----NIVMQLRKVCN 1044
            IP K E ++ VELSSIQ  YYRA+L KN + L    +GV  +S L    NI++Q+RKVCN
Sbjct: 814  IPIKEETVIQVELSSIQKTYYRAILEKNREFL---ARGVKSKSNLPKLTNIMIQIRKVCN 870

Query: 1045 HPYLIPGTEPDS-------GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMT 1097
            HP+LIPG E D+        + E + E+ I++S+KL L+  +L+ L KEGHRVLIFSQM 
Sbjct: 871  HPFLIPGAE-DTIIRQEKLTTDEQIAELLIRSSSKLVLVDKLLQRLKKEGHRVLIFSQMV 929

Query: 1098 KLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRF-NQDKSRFVFLLSTRSCGLGIN 1156
            + L+ILEDYL+  +   +YER+DGSVS   RQA+I RF +Q+  RFVFLLSTRS G+GIN
Sbjct: 930  ESLNILEDYLH--YREYSYERLDGSVSSVLRQASIERFMDQESDRFVFLLSTRSGGVGIN 987

Query: 1157 LATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLML 1216
            L +ADTVI++DSD+NP +D+QA  R HRIGQ+  + VYRL+ R + E+ + ++A KKL+L
Sbjct: 988  LTSADTVILFDSDWNPQSDLQAQARCHRIGQTSNVKVYRLITRNTYEQYLFEVATKKLLL 1047

Query: 1217 DQLFVNKSGS-----QKEVEDILRWGTEEL 1241
            D + +N + +     Q+E +++ +   EE+
Sbjct: 1048 DHIVLNNAKNNSMKKQQEADEVEKSKKEEV 1077


>gi|5917755|gb|AAD56023.1|AF181826_1 chromodomain helicase DNA binding protein 1 [Gallus gallus]
          Length = 981

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 278/682 (40%), Positives = 393/682 (57%), Gaps = 73/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 2    QYLIKWKGWSHIHNTWESEETLKQQNVKGMKKLDNYKKKCQETKRWLKNASPEDVEYYNC 61

Query: 653  VINICDERWKQPQ---RVI--SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
                 D+  KQ Q   R+I  S + S  G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 62   QQEFTDDLHKQYQVVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALIAKKF 118

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGG---ALFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 119  QACIDEY--FSRNQSKTTPFKD----CKILKQRPRFVALKKQPSYIGGRDCLELRDYQLN 172

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 173  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHELYGPFLLVVPLSTLTSWQR 232

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WAP +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 233  EIQTWAPQMNAVVYLGDITSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 285

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            S L G+    + +DE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 286  SFLGGLNRVFIGIDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 345

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  ++ P K E+++ +E+S
Sbjct: 346  MPEKFSSWEDFEEEHGK-GREFGYASLHKELEPFLLRRVKKDVEKSSPAKVEQILRMEMS 404

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 405  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQE 463

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+D
Sbjct: 464  ALQHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLD 520

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 521  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 580

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIG  K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 581  ARAHRIGPKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPS 640

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 641  SSTPFNKEELSAILKFGAEELF 662


>gi|345480702|ref|XP_001602612.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Nasonia
            vitripennis]
          Length = 1832

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 271/704 (38%), Positives = 400/704 (56%), Gaps = 77/704 (10%)

Query: 594  VQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENY----- 645
            V+E        + G+    ++L+KW G + IH++W  +  L   KV   +KLENY     
Sbjct: 261  VEENGDPNPENLDGEETETQYLIKWKGWAYIHSTWESKDSLTTQKVKGIKKLENYVKREQ 320

Query: 646  -----KAKYGTTVINICD----------ERWKQPQRVISLRSSKDGTR-EAFVKWTGLPY 689
                 K   G   I+  +          + +   +R+I+  S  D    + + KW  LPY
Sbjct: 321  DIKQWKKYAGPEDIDYFECQLELQQDLLKSYYNVERIIAEASKLDSNHPDYYCKWESLPY 380

Query: 690  DECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVALT 745
             E TWE      ++K+      F   +R+  KK  S+         C+    + +   L 
Sbjct: 381  SEATWED-GALIIKKWPEKIHEFR--DREDSKKTPSKH--------CKVLKYRPKFHQLK 429

Query: 746  EQPEEL---KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEF 802
            EQP  +   +   L  +Q++ LNW+   W K  +VILADEMGLGKT+    F+  L+   
Sbjct: 430  EQPSYMGRDENCHLRDYQMDGLNWMIHSWCKENSVILADEMGLGKTIQTICFLYYLFHTQ 489

Query: 803  KAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKK 862
            +   P L +VPLSTM +W  E   WAP++N V Y G   +R +IR++EW   D   L   
Sbjct: 490  QLHGPFLCVVPLSTMTSWQREMVQWAPDMNFVTYLGDVHSRNVIREFEW-CYDSKRL--- 545

Query: 863  TSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVL 922
                KFN +LTTYE++L D + L  + W VL+VDE HRLKN  S L+  L  FS  HR+L
Sbjct: 546  ----KFNAILTTYEIVLKDKAFLGALNWAVLLVDEAHRLKNDDSLLYKALAEFSTNHRLL 601

Query: 923  LTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLK 982
            +TGTPLQN++ E++ LL+F+ P  F S   FE K +D    +   +L K + P +LRR+K
Sbjct: 602  ITGTPLQNSLKELWALLHFIMPNKFDSWEEFE-KEHDNAAQKGYSKLHKQLEPFILRRVK 660

Query: 983  KDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKV 1042
            KD  +++P K E+++ VE++++Q +YY+ +LTKN+  LR   KG +  + LNIV++L+K 
Sbjct: 661  KDVEKSLPAKVEQILRVEMTTLQKQYYKWILTKNFNALRKGNKG-STSTFLNIVIELKKC 719

Query: 1043 CNHPYLIPGTEPDS--GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLL 1100
            CNH +L    E +    + ++L ++ I+ S KL LL  +L  L + GHRVLIFSQM ++L
Sbjct: 720  CNHAFLTKPNENEKRDNNEDYLQQL-IRGSGKLVLLDKLLVRLKETGHRVLIFSQMVRML 778

Query: 1101 DILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLAT 1159
            DIL +YL     P  ++R+DGS+    R+ A+  FN   S+ F FLLSTR+ GLGINLAT
Sbjct: 779  DILSEYLQKRHFP--FQRLDGSIKGELRKQALDHFNAPGSQDFCFLLSTRAGGLGINLAT 836

Query: 1160 ADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQL 1219
            ADTVII+DSD+NP  D+QA  RAHRIGQ  ++ +YRLV ++SVEE I++ AK+K++LD L
Sbjct: 837  ADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKSSVEEEIVERAKQKMVLDHL 896

Query: 1220 FVN------------KSGS-------QKEVEDILRWGTEELFND 1244
             +             KS S       ++++  IL++G EELF D
Sbjct: 897  VIQRMDTTGRTVLDKKSSSTNTNPFNKEDLTAILKFGAEELFKD 940


>gi|440790347|gb|ELR11630.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
            castellanii str. Neff]
          Length = 2175

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 255/605 (42%), Positives = 353/605 (58%), Gaps = 47/605 (7%)

Query: 678  REAFVKWTGLPYDECTWEKLDEPALEKYSHLTD--LFVQFERQTLKKDASEDELPRGKGD 735
            R   VKW  LPY +CTWE          + L D     QF +       +      G+  
Sbjct: 687  RRYLVKWCDLPYTDCTWESA--------ADLKDDEKIAQFHKWNTPPAHTNTS---GRPI 735

Query: 736  CQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFI 795
             Q + +      P       L  +QLE LNWL  CW+  +  ILADEMGLGKTV +  F+
Sbjct: 736  SQWAPL----NDPTFKNDNKLRKYQLEGLNWLVYCWYNRRGSILADEMGLGKTVQSITFL 791

Query: 796  SSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD 855
              L+       P L++ PLST+P+W+ E   W   +N + Y G A  R +IR+YEW+   
Sbjct: 792  EYLHRNQYIHGPFLIVCPLSTLPHWIRELEGWT-EMNGIIYQGNAANRTVIREYEWYYQG 850

Query: 856  PDNLNKKTSSYKFNVLLTTYEMIL-ADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNS 914
                 +    +KFNVLLTTYEMIL  D + L  + W+ L++DE HRLKN  SKL   L  
Sbjct: 851  -QGQKRAPGQFKFNVLLTTYEMILRTDWAELSKINWKALIIDEAHRLKNKRSKLLERLKL 909

Query: 915  FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVA 974
            F   HR++LTGTPLQNN  E++ LLNF++P  F SL SF + F DL   ++V  L  ++ 
Sbjct: 910  FKTDHRIILTGTPLQNNTEELWTLLNFIEPHIFTSLPSFLQNFGDLKDAEQVGHLHTVLR 969

Query: 975  PHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLN 1034
            PH+LRRLK+D   +IPPK E +V VEL+S+Q +YYRA+L +N + L     G    +++N
Sbjct: 970  PHLLRRLKEDVESSIPPKEEVLVEVELTSLQKKYYRAILERNREFLNKGCSGGNVPNLIN 1029

Query: 1035 IVMQLRKVCNHPYLIPGT-EPDSGSVE--FLHEMRIKASAKLTLLHSMLKVLYKEGHRVL 1091
            +VMQLRKVCNHP+LI G  E ++  +E    + + I+++ KL LL  +L  L   G +VL
Sbjct: 1030 VVMQLRKVCNHPFLIQGVEEKETAKLEAAAYYNLFIQSAGKLALLDKLLPKLKARGSKVL 1089

Query: 1092 IFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRS 1150
            IFSQM ++LD+LE YL   F    YER+DG+V   DRQA+I RF++  S RFVFLL TR+
Sbjct: 1090 IFSQMVRVLDLLESYLR--FRGHLYERLDGNVRGNDRQASIDRFSKPGSNRFVFLLCTRA 1147

Query: 1151 CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLA 1210
             G+GINLA+ADTV+IYDSD+NP  D+QA     RIGQ+K + VYRL+   + E ++ +  
Sbjct: 1148 GGVGINLASADTVVIYDSDWNPQNDLQAQA---RIGQTKEVKVYRLITSKTYERQMFERT 1204

Query: 1211 KKKLMLDQLFVNK----------------SGSQKEVEDILRWGTEELFN-DSPGINGKDM 1253
             KKL LDQ  ++                 +   KE+ D+L++G  +LF  D  G  G D+
Sbjct: 1205 SKKLGLDQAVLDNINITDIANTKTKKETLAQVGKEINDLLKYGAYDLFREDEEGKGGNDI 1264

Query: 1254 -GENN 1257
             GE++
Sbjct: 1265 FGEDD 1269


>gi|402222785|gb|EJU02851.1| hypothetical protein DACRYDRAFT_21795 [Dacryopinax sp. DJM-731 SS1]
          Length = 2109

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/619 (39%), Positives = 371/619 (59%), Gaps = 32/619 (5%)

Query: 681  FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQF--ERQTLKKDASEDELPR-GKGDCQ 737
            ++KW  L Y++ TW+    P    Y+ +   F  +   R    +  +  EL R   G  +
Sbjct: 665  YIKWEDLGYEQATWDSPYPPRGPAYAGMEKAFRTYLQSRTISHQPLTNQELSRLDAGYKR 724

Query: 738  QSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISS 797
              +   LTEQP+ +KG  LFP QL+ + WL   W++ ++ ILADEMGLGKTV    F++ 
Sbjct: 725  DGKPQELTEQPDFVKGRTLFPFQLQGVTWLWLQWYRKRSAILADEMGLGKTVQVITFLNL 784

Query: 798  LYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYE-WHASDP 856
            ++ +F+   P LV+VP ST+ NW  EFA WAP+L+V  Y G + AR ++R++E +H    
Sbjct: 785  IHVKFRCS-PSLVVVPNSTITNWTREFARWAPDLHVTPYFGESAARKVVREFELFHTGRE 843

Query: 857  DNL-NKKTSSYKFNVLLTTYEMIL-----ADSSHLRGVP-WEVLVVDEGHRLKNSGSKLF 909
            D +  K+    + +V++TTYE +      AD S    V  WEVLVVDE  +LK+  + +F
Sbjct: 844  DYVGTKRKPELRTDVIITTYETVTSAKDQADRSVFNCVTRWEVLVVDESQKLKSDSTLIF 903

Query: 910  SLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEEL 969
              L+  +  HRVL+TGTPL NNI E++NL++FL P ++  L   E ++ +L   +K+++L
Sbjct: 904  KRLSEMNTAHRVLMTGTPLNNNIRELFNLMHFLDPETWDDLPRLEREYAELDE-EKIKQL 962

Query: 970  KKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY----QILRNIGK 1025
               + P+ LRR+K+D + ++P + E +VP+ +S++Q E YR +L+KN     Q++ N+  
Sbjct: 963  HTELKPYFLRRVKEDEL-DLPARNEVIVPLSMSTLQKEVYRGLLSKNAELIGQLVVNVSA 1021

Query: 1026 GVAQQ------SMLNIVMQLRKVCNHPYLIPG-TEPDSGSVEFLHEMRIKASAKLTLLHS 1078
              A+       ++ N++M+LRK   HPYL+    EP       LH + ++AS KL  L  
Sbjct: 1022 STAKAANIKKGTLTNLLMELRKCLQHPYLVSSDLEPKDLPDAELHRIYVEASTKLVFLQK 1081

Query: 1079 MLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQD 1138
            ML  L + GHRVL+FSQ    LDILED+L +E G K + R+DG+    DRQ  + +FN++
Sbjct: 1082 MLPQLKERGHRVLLFSQFVIALDILEDFL-VEEGFK-FLRLDGNTKQSDRQKGMDQFNRE 1139

Query: 1139 KSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLV 1197
             S  F++LLSTR+ G+GINL  ADTVII+D DFNPH D QA+ RAHRIGQ+K +LV++L+
Sbjct: 1140 GSEYFIYLLSTRAGGVGINLTAADTVIIFDPDFNPHMDHQAIARAHRIGQTKPVLVFKLM 1199

Query: 1198 VRASVEERILQLAKKKLMLDQLFVNKSGSQKE----VEDILRWGTEELFNDSPGINGKDM 1253
            ++ S EE+I+Q  KKKL+LD L V K     E    V+ IL +G   LF +  G   +D+
Sbjct: 1200 IKDSAEEKIMQAGKKKLILDHLIVQKMDVDDEGMNDVKTILSFGARALFEEEAGKKIQDI 1259

Query: 1254 GENNTSIEEAVRDLEQKHR 1272
              +   + E +   E   R
Sbjct: 1260 TYSEQDVHELIVKTENDGR 1278


>gi|307210254|gb|EFN86904.1| Chromodomain-helicase-DNA-binding protein 1 [Harpegnathos saltator]
          Length = 1825

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 263/706 (37%), Positives = 402/706 (56%), Gaps = 81/706 (11%)

Query: 594  VQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLK-------------VLAKR 640
            V+E        + G     ++L+KW G S+IHN+W  E  LK             +  +R
Sbjct: 269  VEENGDPNPQDLTGVETEVQYLIKWKGWSHIHNTWESEESLKAQKVKGLKKLDNFIKRER 328

Query: 641  KLENYKAKYGTTVINICD----------ERWKQPQRVISLRSSKDGTR-EAFVKWTGLPY 689
            +++ ++   G   I+  +          + +   +R+I+     D    + F KW  L Y
Sbjct: 329  EIKQWRESAGPEDIDYFECQLELQLDLLKSYNNVERIIAEYDKPDSEHPDYFCKWESLSY 388

Query: 690  DECTWEKLDEPAL--EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQ----QSEIVA 743
             E TWE   + AL  +K+      F   +R+  K+  S+         C+    + +   
Sbjct: 389  VESTWE---DGALIVKKWPEKIKEFR--DREDSKRTPSKH--------CKVLKSRPKFHQ 435

Query: 744  LTEQPEELKGG---ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYC 800
            L  QP+ +  G    L  +Q++ LNW+   W K  +VILADEMGLGKT+    F+  L+ 
Sbjct: 436  LKGQPDYMGKGKDLVLRDYQMDGLNWMIHSWCKENSVILADEMGLGKTIQTICFLYYLFH 495

Query: 801  EFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLN 860
              +   P L++VPLSTM +W  E + WAP++N V Y G   +R +IR++EW  S      
Sbjct: 496  TQQLYGPFLLVVPLSTMTSWQREMSQWAPDMNFVTYLGDVSSRNVIREHEWCYS------ 549

Query: 861  KKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHR 920
              T   KFN +LTTYE++L D + L  + W VL+VDE HRLKN  S L+  L  F   HR
Sbjct: 550  --TKRLKFNAILTTYEIVLKDKTFLGALNWAVLLVDEAHRLKNDDSLLYKALAEFHTNHR 607

Query: 921  VLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRR 980
            +L+TGTPLQN++ E++ LL+F+ P  F S   FE++  +    +   +L K + P +LRR
Sbjct: 608  LLITGTPLQNSLKELWALLHFIMPVKFNSWEEFEKEHEN-AAQKGYSKLHKQLEPFILRR 666

Query: 981  LKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLR 1040
            +KKD  +++P K E+++ VE++S+Q +YY+ +LTKNY  LR   KG +  + LNIV++L+
Sbjct: 667  VKKDVEKSLPAKVEQILRVEMTSVQKQYYKWILTKNYSALRKGTKG-STMTFLNIVIELK 725

Query: 1041 KVCNHPYLIPGTEPD--SGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTK 1098
            K CNH +L   TE +    + ++L ++ I+ S KL LL  +L  L ++GHRVLIFSQM +
Sbjct: 726  KCCNHAFLTKPTEYERKDSNEDYLQQL-IRGSGKLVLLDKLLVRLREKGHRVLIFSQMVR 784

Query: 1099 LLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINL 1157
            +LDI+ +YL  +  P  ++R+DGS+    R+ A+  FN + S  F FLLSTR+ GLGINL
Sbjct: 785  MLDIIGEYLQKKHFP--FQRLDGSIKGELRKQALDHFNAEGSTDFCFLLSTRAGGLGINL 842

Query: 1158 ATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD 1217
            ATADTVII+DSD+NP  D+QA  RAHRIGQ  ++ +YRLV + SVEE I++ AK+K++LD
Sbjct: 843  ATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEEIVERAKQKMVLD 902

Query: 1218 QLFVNKSGS-------------------QKEVEDILRWGTEELFND 1244
             L + +  +                   ++++  IL++G E+LF D
Sbjct: 903  HLVIQRMDTTGRTVLDKKNAGTNSNPFNKEDLNAILKFGAEDLFKD 948


>gi|358365373|dbj|GAA81995.1| chromatin remodeling complex subunit [Aspergillus kawachii IFO 4308]
          Length = 1494

 Score =  435 bits (1118), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 266/728 (36%), Positives = 398/728 (54%), Gaps = 70/728 (9%)

Query: 566  VSEI-HIT--CESTDKDVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKS 622
            +SEI H+T  CES      V  +    VA R   P V +S  VKG     E+L+KW  KS
Sbjct: 431  LSEITHMTWQCESC---ASVPGEVGAIVAWR---PVVHKSDAVKG--TDREYLIKWKNKS 482

Query: 623  NIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDERWKQPQR------VISLRSSK-- 674
              H +W+P S +       +     +   ++          P+       V  +R S   
Sbjct: 483  YNHTTWMPGSWVWGFVNHHMRRAFMRSDKSLEPCMTAEEAIPEDFLLVDIVFDVRFSGTS 542

Query: 675  ----------------DGTREAFVKWTGLPYDECTWEKLDEPA--LEKYSHLTDLFVQFE 716
                            D   E +VK+ GLPY+E TW+   E +   E++      +  + 
Sbjct: 543  PDTGRKRTFEEDVARVDDVVEMYVKFKGLPYEEVTWDTPPERSSNPERWESFRAAYEDWV 602

Query: 717  RQTLKKDASEDELPRGKGDCQQSEI---VALTEQPEELKGGALFPHQLEALNWLRKCWHK 773
            ++      ++D L R     ++      V  + QPE + GG +  +Q + L+WL   W+K
Sbjct: 603  KREYTHIPNQDNLRRRIAHVRKQNFSSNVVKSGQPETMTGGQIMDYQKDGLDWLYYMWYK 662

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
             +N ILADEMGLGKT+     I++L  ++    P L++VP ST PNW  E   W P+L V
Sbjct: 663  QQNAILADEMGLGKTIQVIGLIATL-VQYHKCWPFLIVVPNSTCPNWRKEIKTWVPSLRV 721

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH--LRGVPWE 891
            V Y+G A +R + + YE  A D        +S + +V++ +YE ++ D+S   L  VPW 
Sbjct: 722  VTYYGSAFSRKLAQDYEMFADD-------DTSLRCHVVVASYETLVDDASRRLLSKVPWT 774

Query: 892  VLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLS 951
             L+VDEG RLKN  S+L+  L+   F  ++LLTGTPLQNNI E++NLL F  P+      
Sbjct: 775  GLIVDEGQRLKNDKSQLYDALSRIKFPFKILLTGTPLQNNIRELFNLLQFCDPSK--RAD 832

Query: 952  SFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRA 1011
              E ++ DL+  + + EL  ++ P  LRR K   +  +PP  + +VPV ++++Q + Y++
Sbjct: 833  DLENEYGDLSK-ENILELHNMIRPFFLRRTKAQVLSFLPPVAQIIVPVSMTTVQKKLYKS 891

Query: 1012 MLTKNYQILRNIG---------KGVAQQSMLNIVMQLRKVCNHPYLIP-GTEPDSGSVEF 1061
            +L KN Q+++ I          K   + ++ NI+MQLRK   HP++     E  + +   
Sbjct: 892  ILAKNPQLIKAIFQRKEGTRALKQTEKHNLNNILMQLRKCLCHPFVYSRAIEEKTSNAAI 951

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
             H   + A+AK  LL  ML  L   GHRVLIFSQ  + LDI+ED+L  E     Y R+DG
Sbjct: 952  SHRHLVDAAAKFQLLELMLPKLKNRGHRVLIFSQFLENLDIIEDFL--EGVGLMYLRLDG 1009

Query: 1122 SVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             +S  ++Q  I  +N +D   F FLLSTRS G+GINLATADTVII D DFNPH D+QA++
Sbjct: 1010 RMSSLEKQKTIDAYNAEDSPYFAFLLSTRSGGVGINLATADTVIIMDPDFNPHQDMQALS 1069

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKE----VEDILRW 1236
            RAHRIGQ  ++LV++L+ RAS EE+I+Q+ KKK++LD + +++  S++E    +E ILR 
Sbjct: 1070 RAHRIGQKNKVLVFQLMTRASAEEKIMQIGKKKMVLDHVLIDRMVSEEEDGRDLETILRH 1129

Query: 1237 GTEELFND 1244
            G + LF+D
Sbjct: 1130 GAQALFDD 1137


>gi|388856754|emb|CCF49541.1| probable CHD1-transcriptional regulator [Ustilago hordei]
          Length = 1742

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 262/680 (38%), Positives = 389/680 (57%), Gaps = 76/680 (11%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAK-RKLENY----------------KAKYGTTVINI 656
            F+VKW   S++H++      LK     ++++NY                 ++     + I
Sbjct: 362  FIVKWKRYSHLHDTHETYDFLKPYPGFKRVDNYIKSVFYPEKALLSDPNASREDIEALQI 421

Query: 657  CDER-------WKQPQRVISLRSSKDGTREAF------VKWTGLPYDECTWEKLDEPALE 703
              ER       +K  +RVI+ R +       +      VKW GLPY + TWE     A +
Sbjct: 422  EKERQAELIQSFKTVERVIAQRDNHANKEVPYPHLAYLVKWKGLPYADSTWE-----AEQ 476

Query: 704  KYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQS--EIVALTEQPEELKGGALFPHQL 761
            +  H+     Q         +S   LP    +  Q   +   +TEQP  +  G L   Q+
Sbjct: 477  EIKHI----AQHAITAYLARSSSLTLPWRSHNFSQGRPKYTRMTEQPAYINSGTLKDFQM 532

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
              LNWL   W K++N ILADEMGLGKTV   +F+S L+       P LV+VPLST+P W+
Sbjct: 533  TGLNWLAYLWSKNENGILADEMGLGKTVQTVSFLSYLFHSCYQYGPFLVVVPLSTLPAWM 592

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
             +   WAP+LN + Y G + +RA+IR+YE+  +      KK    KFNVL+TTYE IL D
Sbjct: 593  NQLEHWAPDLNTLAYIGNSASRAMIREYEFGPA------KKI---KFNVLVTTYEFILKD 643

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
             + L  + W+ L VDE HRLKNS ++L+  LNSF    ++L+TGTPLQNN+ E+  LL+F
Sbjct: 644  RAELGHIRWQYLAVDEAHRLKNSEAQLYEALNSFHAAGKLLITGTPLQNNVKELIALLHF 703

Query: 942  LQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVEL 1001
            L+P  F     F+    D      +++L + +   MLRRLKKD ++ +P K+E+++ VE+
Sbjct: 704  LRPDQFDLDVDFDINNVDQAV---IKQLHQKLDNVMLRRLKKDVVKELPTKSEKILRVEM 760

Query: 1002 SSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF 1061
            S++Q   Y+A+LT+NY +L   G   AQ S+LNI ++L+K  NHPYL  GTE  S + + 
Sbjct: 761  SAMQQRMYKAILTRNYSLLS--GATTAQFSLLNIAIELKKASNHPYLFDGTEIISDNRQD 818

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
              +  +  S K+ LL  +L  L  +GHRVLIFSQM ++LDIL DY+++      ++R+DG
Sbjct: 819  TLKGLVMHSGKMVLLDKLLARLKADGHRVLIFSQMVRMLDILSDYMSLR--GYIHQRLDG 876

Query: 1122 SVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
            ++S   R+ AI  FN D+S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM 
Sbjct: 877  TISSEVRKKAIEHFNADRSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMA 936

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK---SG------------ 1225
            RAHR+     + V+RL+ + +VEE +L+ AK+K++L+   +++   SG            
Sbjct: 937  RAHRLNSKFHVSVFRLLTKDTVEEDVLERAKRKMVLEYAIIHQMDTSGTNFAPKASAKNQ 996

Query: 1226 ---SQKEVEDILRWGTEELF 1242
               S++E+  IL++G + +F
Sbjct: 997  QQFSKEELGAILKFGAQNMF 1016


>gi|300121547|emb|CBK22066.2| unnamed protein product [Blastocystis hominis]
          Length = 787

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/603 (40%), Positives = 355/603 (58%), Gaps = 57/603 (9%)

Query: 677  TREAFVKWTGLPYDECTWEKLD----EPALEKY-SHL--TDLFVQFERQTLKKDASEDEL 729
            T++  VKW    Y+E TWE  D    E A+ KY +HL   D  +   R+ +  +A+    
Sbjct: 85   TKQFLVKWQSTQYEEITWEVFDDFRDEAAIRKYYAHLCGLDRSLTPRRRVVDPNAAA--- 141

Query: 730  PRGKGDCQQSEIVALTEQPEEL--KGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGK 787
            P  +    Q   V     PEE+  KG  L P+Q+E +NW+   W  ++N ILADEMGLGK
Sbjct: 142  PHDRPPLAQFRKV----NPEEIPTKGNQLRPYQVEGVNWMLWNWFNNRNSILADEMGLGK 197

Query: 788  TVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIR 847
            TV +  FI  +   +K K P L++ PLST+P+W AE A W  +L+VV +HG  ++R II+
Sbjct: 198  TVQSTLFIQQILHRYKTKPPFLIVAPLSTLPHWEAEIARWT-DLHVVVFHGRVESRRIIK 256

Query: 848  QYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSK 907
            QYEW          K+   +F++LLTT+++ +A+++ L  + W  LVVDE HRLK   +K
Sbjct: 257  QYEW----------KSQEGEFDILLTTFQICIAEAAALSSISWAGLVVDEAHRLKGKNNK 306

Query: 908  LFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVE 967
            L  +L    F  ++LLTGTPLQNN  E++ LLNFLQP  F     F+  F D+    ++E
Sbjct: 307  LGDVLKKIDFGCKLLLTGTPLQNNTEELWILLNFLQPERFHDAEQFQADFGDMKVAAQLE 366

Query: 968  ELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGV 1027
            +L  L+ P MLRR+K+D  +++ PK E ++ VE++++Q ++YRA+   N  +        
Sbjct: 367  KLHTLLKPLMLRRMKEDVEKSLKPKEETVINVEMTAMQKKFYRAVYDHNTSVRSVSTDSK 426

Query: 1028 AQQSMLNIVMQLRKVCNHPYLIPGTE-----------PDSGSV--EFLHEMRIKASAKLT 1074
               S++NI M+LRK CNHP+LI G E           P   S+  E   +    AS K+ 
Sbjct: 427  NLPSLMNITMELRKCCNHPFLIRGAESTVIEEICAVYPFRSSLAPELALKYITYASGKMV 486

Query: 1075 LLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITR 1134
            +L  +L  L  +GHRVL+FSQM  +L+I++DYL+++  P  +ER+DG V + DRQAAI R
Sbjct: 487  VLDKLLPKLRAQGHRVLLFSQMVNMLNIIQDYLSMKGYP--FERIDGGVKISDRQAAIDR 544

Query: 1135 FNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            F+   S RF+FL+ TR+ G+GINL  ADTVIIYDSD+NP  DIQA  R HRIGQ K + V
Sbjct: 545  FSTPGSDRFIFLICTRAGGVGINLTAADTVIIYDSDWNPQNDIQAQARCHRIGQDKAVKV 604

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFVN--------------KSGSQKEVEDILRWGTE 1239
            YRL+   + E  + Q A  KL LD+  +N                 S+K+VE +L++G  
Sbjct: 605  YRLITNRTYEMEMFQKANMKLGLDKAVLNPLKQNIKTDGQVEMSKLSKKDVETLLKYGAY 664

Query: 1240 ELF 1242
            +LF
Sbjct: 665  DLF 667


>gi|83286456|ref|XP_730169.1| chromodomain-helicase-DNA-binding protein, CHD-1-related [Plasmodium
            yoelii yoelii 17XNL]
 gi|23489816|gb|EAA21734.1| chromodomain-helicase-DNA-binding protein, CHD-1-related [Plasmodium
            yoelii yoelii]
          Length = 2541

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 270/684 (39%), Positives = 389/684 (56%), Gaps = 66/684 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENY---------KAKYGTT----VINICD 658
            EFLVKW+GKS+IHN +     L+     +K++NY         K KY T        I  
Sbjct: 755  EFLVKWIGKSHIHNFFCTYEYLRYFNGVKKVDNYIKKIRLSFQKRKYMTADEIEQEKIYS 814

Query: 659  ERWKQ-------PQRVISLRSSKDGTREAF-VKWTGLPYDECTWEKLDEPALEKYSHLTD 710
            E  KQ        +R+I+ R  +    + F VKWT   YD+CT E         +  L D
Sbjct: 815  EIKKQIEMDSIHAERIITHRKCEITNEQLFLVKWTSCAYDQCTEETKQTLLDHNFGKLID 874

Query: 711  LFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKC 770
             +   E +     A      RG      ++     E P  L G  L  +QL  LNW+   
Sbjct: 875  EYFDRESKIYGPKALSSIWNRGP--LTATKFDPYNETPSYLHGKKLRAYQLTGLNWMVSR 932

Query: 771  WHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPN 830
              ++ +V+LADEMGLGKTV   A +  +  + K   P LVLVP ST+ NWL EF  W P 
Sbjct: 933  MKRNLSVLLADEMGLGKTVQTIAVVGHMLYKEKLIGPYLVLVPQSTVDNWLNEFKNWLPQ 992

Query: 831  LNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI--LADSSHLRGV 888
             NVV YHG A +R +IR YE       N   +   YKF+V +TT  ++  ++D   L+ +
Sbjct: 993  ANVVCYHGNAVSRELIRTYELKKVYVQN---RGYRYKFDVCITTPSILNSVSDVELLKRI 1049

Query: 889  PWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 948
            PW+++VVDE H+LKN  SK F  L  F  + ++LL+GTPL NN+ E++ LL+FL P  + 
Sbjct: 1050 PWQLMVVDEAHQLKNRQSKRFIELKQFMAESKLLLSGTPLHNNLEELWTLLHFLNPQQYT 1109

Query: 949  SLSSFEEKFNDLTTTQKVEELKK---LVAPH-----MLRRLKKDAMQNIPPKTERMVPVE 1000
               +F++K+N++  T  + E K+   +   H     +LRR+KKD  +++P K ER++ VE
Sbjct: 1110 YYEAFQKKYNEIENTSLIGEAKQKQLMQLQHELHEVILRRVKKDVEKSLPNKVERILRVE 1169

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            LS IQ EYY+ +LTKNY+ L     G A+ S+ NI M+L+KVCNHP+L    EP     +
Sbjct: 1170 LSPIQIEYYKNILTKNYEQLAKASGG-AKNSLQNICMELKKVCNHPFLC--CEPIDK--D 1224

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
               E  + +S K+ LL  +L  L + G+RVLIFSQM K+L+IL +YL +  G K ++R+D
Sbjct: 1225 EYRERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLR-GFK-HQRLD 1282

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++   R+ A+  FN   S  FVFLLST++ GLGINL +ADTVIIYDSD+NP  D+QA 
Sbjct: 1283 GTMTKEMRKKAMNHFNSKNSDDFVFLLSTKAGGLGINLTSADTVIIYDSDWNPQNDLQAG 1342

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQL--------------FVNKSG 1225
             RAHRIGQ+K + +YRLV + S+E+ IL+ AK K++LD L              F+   G
Sbjct: 1343 ARAHRIGQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKKQNDNVNFIGGEG 1402

Query: 1226 S-------QKEVEDILRWGTEELF 1242
            S       ++E+  IL++G+++L+
Sbjct: 1403 SNSSNGFTREELSKILKFGSQKLW 1426


>gi|350638405|gb|EHA26761.1| hypothetical protein ASPNIDRAFT_118945 [Aspergillus niger ATCC 1015]
          Length = 1452

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 266/728 (36%), Positives = 399/728 (54%), Gaps = 70/728 (9%)

Query: 566  VSEI-HIT--CESTDKDVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKS 622
            +SEI H+T  CES      V  +    VA R   P V +S     KA   E+L+KW  KS
Sbjct: 394  LSEITHMTWQCESC---ASVPGEVGAIVAWR---PVVHKSD--AAKAADREYLIKWKNKS 445

Query: 623  NIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDERWKQPQR------VISLRSSK-- 674
              H +W+P S +       +     +   ++          P+       V  +R S   
Sbjct: 446  YNHTTWMPGSWVWGFVNHHMRRAFMRSDKSLEPCMTAEEAIPEDFLLVDIVFDVRYSGAS 505

Query: 675  ----------------DGTREAFVKWTGLPYDECTWEKLDEPA--LEKYSHLTDLFVQFE 716
                            D   E +VK+ GLPY+E TW+   E +   E++      +  + 
Sbjct: 506  PDTGRKHTFEEDVARVDDVVEMYVKFKGLPYEEATWDTPPERSSNPERWESFRAAYEDWV 565

Query: 717  RQTLKKDASEDELPRGKGDCQQSEI---VALTEQPEELKGGALFPHQLEALNWLRKCWHK 773
            ++      ++D L R     ++      V  + QPE + GG +  +Q + L+WL   W+K
Sbjct: 566  KREYTHIPNQDNLRRRIAHVRKQNFSSNVVKSGQPETMTGGQIMDYQKDGLDWLYYMWYK 625

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
             +N ILADEMGLGKT+     I++L  ++    P L++VP ST PNW  E   W P+L V
Sbjct: 626  QQNAILADEMGLGKTIQVIGLIATL-VQYHKCWPFLIVVPNSTCPNWRKEIKTWVPSLRV 684

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH--LRGVPWE 891
            V Y+G A +R + + YE  A D        +S + +V++ +YE ++ D+S   L  VPW 
Sbjct: 685  VTYYGSAFSRKLAQDYEMFADD-------DTSLRCHVVVASYETLVDDASRRLLSKVPWA 737

Query: 892  VLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLS 951
             L+VDEG RLKN  S+L+  L+   F  ++LLTGTPLQNNI E++NLL F  P+      
Sbjct: 738  GLIVDEGQRLKNDKSQLYDALSRIRFPFKILLTGTPLQNNIRELFNLLQFCDPSK--RAD 795

Query: 952  SFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRA 1011
              E ++ DL+T + + EL  ++ P  LRR K   +  +PP  + +VPV ++++Q + Y+ 
Sbjct: 796  DLENEYGDLST-ENILELHNMIRPFFLRRTKAQVLSFLPPVAQIIVPVSMTTVQKKLYKF 854

Query: 1012 MLTKNYQILRNIG---------KGVAQQSMLNIVMQLRKVCNHPYLIP-GTEPDSGSVEF 1061
            +L KN Q+++ I          K   + ++ NI+MQLRK   HP++     E  + +   
Sbjct: 855  ILAKNPQLIKAIFQRKEGTRALKQTEKHNLNNILMQLRKCLCHPFVYSRAIEEKTSNAAV 914

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
             H   + A+AK  LL  ML  L   GHRVLIFSQ  + LDI+ED+L  E    TY R+DG
Sbjct: 915  SHRHLVDAAAKFQLLELMLPKLKNRGHRVLIFSQFLENLDIIEDFL--EGVGLTYLRLDG 972

Query: 1122 SVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             +S  ++Q  I  +N ++S  F FLLSTRS G+GINLATADTVII D DFNPH D+QA++
Sbjct: 973  RMSSLEKQKTIDAYNAEESPYFAFLLSTRSGGVGINLATADTVIIMDPDFNPHQDMQALS 1032

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQ----KEVEDILRW 1236
            RAHRIGQ  ++LV++L+ RAS EE+I+Q+ KKK++LD + +++  S+    +++E ILR 
Sbjct: 1033 RAHRIGQKNKVLVFQLMTRASAEEKIMQIGKKKMVLDHVLIDRMVSEEDDGRDLETILRH 1092

Query: 1237 GTEELFND 1244
            G + LF+D
Sbjct: 1093 GAQALFDD 1100


>gi|393911475|gb|EJD76323.1| associated with TFs and helicase family protein [Loa loa]
          Length = 2724

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 252/657 (38%), Positives = 376/657 (57%), Gaps = 56/657 (8%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDERWKQP----QR 666
            + VK+  K+ IH  W  +  L+   +R   KL+ +  K   +     DER+       +R
Sbjct: 937  YFVKYKNKAYIHCQWKSQYDLEAGDRRAAAKLKRFHQKRAHSSDQDEDERFNSDFIIVER 996

Query: 667  VISLRSSKDGTREAFVKWTGLPYDECTWEKLD---EPALEKYSHLTDLFVQFERQTLKK- 722
            V+   +  +G     VKW  LPY+E TWEK++   E  +E Y           R T    
Sbjct: 997  VLDA-NELEGKDFVLVKWKSLPYEEVTWEKVEIIPEDKIEAYKR---------RNTCDPL 1046

Query: 723  DASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADE 782
                   P     C+  E +   +         L  +Q E +NWL  C++  +N ILADE
Sbjct: 1047 KVKPKPHPSASDWCKIPEDITFKD------NNRLREYQFEGVNWLLYCYYNKQNCILADE 1100

Query: 783  MGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKA 842
            MGLGKTV    F+  +Y ++    P L++VPLST+ NW  EF  W  ++N + YHG A +
Sbjct: 1101 MGLGKTVQTICFLQRVY-DYGIHGPFLIVVPLSTIHNWQREFETWT-DMNTIVYHGSASS 1158

Query: 843  RAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLK 902
            R II+Q E+     +    K +  KF+ L+TT+EM+++D   L+ + ++V ++DE HRLK
Sbjct: 1159 RQIIQQTEFCYRPEELKGGKRNIVKFDALITTFEMVVSDCDILKQISYQVCIIDEAHRLK 1218

Query: 903  NSGSKLFSLLNSFS-FQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLT 961
            N   KL +        +HRVLLTGTPLQNNI E+Y+LLNFL+P  F S S+F E+F    
Sbjct: 1219 NRNCKLLTSGLLSLTVEHRVLLTGTPLQNNIEELYSLLNFLEPEQFHSSSAFLEQFGQCQ 1278

Query: 962  TTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILR 1021
            T  +V+ L+ ++ P MLRRLK+D  + + PK E ++ ++LS+ Q +YYRA+L +N+    
Sbjct: 1279 TEDQVQRLQDILKPMMLRRLKEDVEKTLQPKEETIIEIQLSNTQKKYYRAILERNFS--- 1335

Query: 1022 NIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE-----------PDSGSVEFLHEMRIKAS 1070
            ++ KG +  S++N +M+LRK CNHP+LI G E           PD    +      +++S
Sbjct: 1336 HLCKGTSVPSLMNAMMELRKCCNHPFLISGAEEQILAEVKTGHPDWSEDDVYQYALVQSS 1395

Query: 1071 AKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQA 1130
             KL L+  +L  L+ +GH+VLIFSQM ++LDI+E++L  +    T+ER+DG+V    RQ+
Sbjct: 1396 GKLVLIAKLLPKLHTDGHKVLIFSQMVRVLDIIEEFLIAQN--YTFERIDGNVRGDLRQS 1453

Query: 1131 AITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSK 1189
            AI RF+ +D  RF+FLL TR+ GLGINL  ADTVII+DSD+NP  D+QA  R HRIGQ+K
Sbjct: 1454 AIDRFSKKDSDRFIFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQTK 1513

Query: 1190 RLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG---------SQKEVEDILRWG 1237
             + VYRL+   + E  +   A  KL LD+  +  +          S+KE+E++L+ G
Sbjct: 1514 MVKVYRLITCNTYEREMFDKASLKLGLDRAVLQSTTALKDTSQQLSRKEIEELLKKG 1570


>gi|134055452|emb|CAK43967.1| unnamed protein product [Aspergillus niger]
          Length = 1670

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 266/728 (36%), Positives = 399/728 (54%), Gaps = 70/728 (9%)

Query: 566  VSEI-HIT--CESTDKDVDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKS 622
            +SEI H+T  CES      V  +    VA R   P V +S     KA   E+L+KW  KS
Sbjct: 430  LSEITHMTWQCESC---ASVPGEVGAIVAWR---PVVHKSD--AAKAADREYLIKWKNKS 481

Query: 623  NIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDERWKQPQR------VISLRSSK-- 674
              H +W+P S +       +     +   ++          P+       V  +R S   
Sbjct: 482  YNHTTWMPGSWVWGFVNHHMRRAFMRSDKSLEPCMTAEEAIPEDFLLVDIVFDVRYSSAS 541

Query: 675  ----------------DGTREAFVKWTGLPYDECTWEKLDEPA--LEKYSHLTDLFVQFE 716
                            D   E +VK+ GLPY+E TW+   E +   E++      +  + 
Sbjct: 542  PDTGRKHTFEEDVARVDDVVEMYVKFKGLPYEEATWDTPPERSSNPERWESFRAAYEDWV 601

Query: 717  RQTLKKDASEDELPRGKGDCQQSEI---VALTEQPEELKGGALFPHQLEALNWLRKCWHK 773
            ++      ++D L R     ++      V  + QPE + GG +  +Q + L+WL   W+K
Sbjct: 602  KREYTHIPNQDNLRRRIAHVRKQNFSSNVVKSGQPETMTGGQIMDYQKDGLDWLYYMWYK 661

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
             +N ILADEMGLGKT+     I++L  ++    P L++VP ST PNW  E   W P+L V
Sbjct: 662  QQNAILADEMGLGKTIQVIGLIATL-VQYHKCWPFLIVVPNSTCPNWRKEIKTWVPSLRV 720

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH--LRGVPWE 891
            V Y+G A +R + + YE  A D        +S + +V++ +YE ++ D+S   L  VPW 
Sbjct: 721  VTYYGSAFSRKLAQDYEMFADD-------DTSLRCHVVVASYETLVDDASRRLLSKVPWA 773

Query: 892  VLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLS 951
             L+VDEG RLKN  S+L+  L+   F  ++LLTGTPLQNNI E++NLL F  P+      
Sbjct: 774  GLIVDEGQRLKNDKSQLYDALSRIRFPFKILLTGTPLQNNIRELFNLLQFCDPSK--RAD 831

Query: 952  SFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRA 1011
              E ++ DL+T + + EL  ++ P  LRR K   +  +PP  + +VPV ++++Q + Y+ 
Sbjct: 832  DLENEYGDLST-ENILELHNMIRPFFLRRTKAQVLSFLPPVAQIIVPVSMTTVQKKLYKF 890

Query: 1012 MLTKNYQILRNIG---------KGVAQQSMLNIVMQLRKVCNHPYLIP-GTEPDSGSVEF 1061
            +L KN Q+++ I          K   + ++ NI+MQLRK   HP++     E  + +   
Sbjct: 891  ILAKNPQLIKAIFQRKEGTRALKQTEKHNLNNILMQLRKCLCHPFVYSRAIEEKTSNAAV 950

Query: 1062 LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDG 1121
             H   + A+AK  LL  ML  L   GHRVLIFSQ  + LDI+ED+L  E    TY R+DG
Sbjct: 951  SHRHLVDAAAKFQLLELMLPKLKNRGHRVLIFSQFLENLDIIEDFL--EGVGLTYLRLDG 1008

Query: 1122 SVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMN 1180
             +S  ++Q  I  +N ++S  F FLLSTRS G+GINLATADTVII D DFNPH D+QA++
Sbjct: 1009 RMSSLEKQKTIDAYNAEESPYFAFLLSTRSGGVGINLATADTVIIMDPDFNPHQDMQALS 1068

Query: 1181 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQ----KEVEDILRW 1236
            RAHRIGQ  ++LV++L+ RAS EE+I+Q+ KKK++LD + +++  S+    +++E ILR 
Sbjct: 1069 RAHRIGQKNKVLVFQLMTRASAEEKIMQIGKKKMVLDHVLIDRMVSEEDDGRDLETILRH 1128

Query: 1237 GTEELFND 1244
            G + LF+D
Sbjct: 1129 GAQALFDD 1136


>gi|164660548|ref|XP_001731397.1| hypothetical protein MGL_1580 [Malassezia globosa CBS 7966]
 gi|159105297|gb|EDP44183.1| hypothetical protein MGL_1580 [Malassezia globosa CBS 7966]
          Length = 999

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 264/681 (38%), Positives = 389/681 (57%), Gaps = 77/681 (11%)

Query: 614  FLVKWVGKSNIHNSW-IPESQLKVLAKRKLENY-KAKYGTT---------------VINI 656
            F++KW G S++HN+  + E   +    +++ NY KA +                   + I
Sbjct: 153  FVIKWRGYSHLHNTHELYEFLQRFPGAKRVSNYIKAVWQPMHDISTNPHATREDLEALQI 212

Query: 657  CDER-------WKQPQRVISLRSSKDGTREA-------FVKWTGLPYDECTWEKLDEPAL 702
              ER       ++  +RVI+ R +   T+E          KW  L YD+C+WE  D+ A 
Sbjct: 213  QRERQRALLESFRTVERVIAQRDNPP-TKEVPYTHTQYLCKWKELGYDQCSWESEDDVAP 271

Query: 703  EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL-KGGALFPHQL 761
               + +     +    T+   +  +   RG+        V +TEQP+ + + G L   Q+
Sbjct: 272  IARAQIDAYLARATSVTVP--SRSESFSRGR-----PPYVRMTEQPKYIGEHGTLKDFQM 324

Query: 762  EALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWL 821
              LNWL   W  ++N ILADEMGLGKTV   AF S L+       P LV+VPLST+P+WL
Sbjct: 325  TGLNWLAYLWSHAENGILADEMGLGKTVQTVAFFSYLFHTCYQYGPFLVVVPLSTLPSWL 384

Query: 822  AEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD 881
            ++F  WAP++NVV Y G +++R +IR+YE+    P  +       + NVLLTTYE IL D
Sbjct: 385  SQFEQWAPDMNVVAYTGNSQSREVIREYEF--GPPRKM-------RLNVLLTTYEFILKD 435

Query: 882  SSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNF 941
             + L  + W+ L VDE HRLKN+ S L+  L+SF    ++L+TGTPLQNN+ E+  LL+F
Sbjct: 436  RAELMPIKWQFLAVDEAHRLKNAESLLYECLSSFHCAGKLLITGTPLQNNVRELSALLHF 495

Query: 942  LQPASFPSLSSFEEKFNDLTTTQ-KVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVE 1000
            L+P  F     FE  F+     Q K++EL + +   MLRRLK+D  + +P K+E+++ VE
Sbjct: 496  LRPDQF----DFEVDFDISNVDQNKIQELHERLENVMLRRLKRDVAKELPTKSEQILRVE 551

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            +S++Q   Y+A+LT+NY +L   G    Q S+LNI ++L+K  NHPYL  G E  + S E
Sbjct: 552  MSAMQQRMYKAILTRNYSLLS--GSHSTQFSLLNIAVELKKASNHPYLFDGVETPTNSRE 609

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
                  I  S K+ LL  +L  L  + HRVLIFSQM  +LDIL DYL++      ++R+D
Sbjct: 610  ETLRGLIMHSGKMVLLDKLLARLKADNHRVLIFSQMVHMLDILSDYLSLR--GYVHQRLD 667

Query: 1121 GSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+VS   R+ AI  FN  +S  F FLLSTR+ GLGINL TADTVII+DSD+NP  D+QAM
Sbjct: 668  GTVSSDTRKRAIDHFNAPQSPDFCFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAM 727

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK---SG----------- 1225
            +RAHR+     + V+R + + +VEE +L+ AK+K+ L+   +N+   SG           
Sbjct: 728  SRAHRLNSKFHINVFRFLTKGTVEEDVLERAKQKMGLEYAIINQMDTSGTNFAPKSLSKS 787

Query: 1226 ----SQKEVEDILRWGTEELF 1242
                S++E+  IL++G + +F
Sbjct: 788  SQNFSREELGAILKFGAQSMF 808


>gi|74150111|dbj|BAE24366.1| unnamed protein product [Mus musculus]
          Length = 924

 Score =  431 bits (1109), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 262/629 (41%), Positives = 367/629 (58%), Gaps = 50/629 (7%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 315  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 374

Query: 653  VINICDERWKQPQ---RVI--SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSH 707
               + D+  KQ Q   R+I  S + S  G  + + KW GLPY EC+WE   + AL     
Sbjct: 375  QQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECSWE---DGALISKKF 431

Query: 708  LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLEAL 764
             T +   F R   K    +D     K   Q+   VAL +QP  + G     L  +QL  L
Sbjct: 432  QTCIDEYFSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGL 487

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  E 
Sbjct: 488  NWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREI 547

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D + 
Sbjct: 548  QTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDKAF 600

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+ P
Sbjct: 601  LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP 660

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S++
Sbjct: 661  EKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL 719

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVEFL 1062
            Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E L
Sbjct: 720  QKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEAL 778

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+DGS
Sbjct: 779  QHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLDGS 835

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA  R
Sbjct: 836  IKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR 895

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLA 1210
            AHRIGQ K++ +YRLV + SVEE IL+ A
Sbjct: 896  AHRIGQKKQVNIYRLVTKGSVEEDILERA 924


>gi|358255110|dbj|GAA56827.1| chromodomain-helicase-DNA-binding protein 7 [Clonorchis sinensis]
          Length = 4088

 Score =  431 bits (1109), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 239/580 (41%), Positives = 335/580 (57%), Gaps = 39/580 (6%)

Query: 681  FVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSE 740
             VKW  L Y++ TWE   +    K           +     +D+    +       +  E
Sbjct: 1584 LVKWRSLAYEDATWELAQDVDPAKVKEFIKWRTPPKIAPTARDSDYKIIRPDPSTWRPIE 1643

Query: 741  IVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYC 800
             + + +   +L+      +QLE +NWL  CW   +N ILADEMGLGKTV + AF+  L  
Sbjct: 1644 AIKVYKNNNKLRD-----YQLEGVNWLTYCWFHHRNCILADEMGLGKTVQSVAFLLELE- 1697

Query: 801  EFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYE-WHASDPDNL 859
            +   + P LV+VPLST+ NW  EF  W+ + NVV YHG + +R +I++YE ++   P++ 
Sbjct: 1698 KAGVRGPFLVIVPLSTVANWQREFENWS-DFNVVVYHGSSISRNMIQEYEIFYKRRPNDT 1756

Query: 860  NKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQH 919
              +   YKF+ L+TT+E+++ D      V W   V+DE HRLKN   KL   L      H
Sbjct: 1757 AVRHDVYKFHALVTTFEVLMTDIEFFGQVHWAAAVIDEAHRLKNKKCKLGEGLRYLELDH 1816

Query: 920  RVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLR 979
            RVLLTGTPLQNN+ E++ LLNFL+P  F   SSF  ++ DL T ++VE LK L+ P MLR
Sbjct: 1817 RVLLTGTPLQNNVEELFGLLNFLEPERFNCSSSFVAEYGDLKTEEQVENLKTLLKPMMLR 1876

Query: 980  RLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQL 1039
            RLK+D  +++ PK E +  VEL++IQ +YYRA++ +N+  L          +++N++M+L
Sbjct: 1877 RLKEDVEKSLAPKEETI--VELTNIQKKYYRAIMERNFAFLCKGSTYSNAPNLMNVMMEL 1934

Query: 1040 RKVCNHPYLIPGTEPDSGSVEFLHEMR-------------IKASAKLTLLHSMLKVLYKE 1086
            RK CNHP+LI G E        L EMR             + AS KL L+H +L  L   
Sbjct: 1935 RKCCNHPFLIKGAE-----EAILEEMRTQEAKESTTFHALVYASGKLVLIHKLLPKLRAN 1989

Query: 1087 GHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSRFVFLL 1146
            GH+VLIFSQM ++LDILED+L  +  P  +ER+DG +    RQ AI RF  D  +FVFLL
Sbjct: 1990 GHKVLIFSQMIRVLDILEDFLIHQRYP--FERIDGRIHGPLRQEAIDRFTADPDKFVFLL 2047

Query: 1147 STRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERI 1206
             T++ GLGINL  AD VIIYDSD+NP  D+QA  R HRIGQ K + VYRL+ R + E  +
Sbjct: 2048 CTKAGGLGINLTAADVVIIYDSDWNPQNDLQAQARCHRIGQQKMVKVYRLITRNTYEREM 2107

Query: 1207 LQLAKKKLMLDQLFVNKSG---------SQKEVEDILRWG 1237
               A  KL LD+  +   G         S+KE+E++L+ G
Sbjct: 2108 FDRASLKLGLDRAVLQSMGSKEARQAQMSKKEIEELLKKG 2147


>gi|430812954|emb|CCJ29671.1| unnamed protein product, partial [Pneumocystis jirovecii]
          Length = 1131

 Score =  431 bits (1109), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 262/698 (37%), Positives = 396/698 (56%), Gaps = 66/698 (9%)

Query: 616  VKWVGKSNIHNSWIPESQLK-VLAKRKLENYKAKY-----------GTTV-----INICD 658
            +KW  +S++HN+W    +LK     +K++NY  +Y            TT      ++I  
Sbjct: 1    IKWQNRSHLHNTWKTYDELKKSRGWKKVDNYIKQYIDLDKQIRENPTTTAEHIEAMDIES 60

Query: 659  ER-------WKQPQRVISLR------SSKDGTREAFVKWTGLPYDECTWEKLDEPALEKY 705
            ER       ++   R+IS +        K    E F KW  L YD CTWE          
Sbjct: 61   ERHRNVLIEYQTVDRIISSKIVKSCEFDKHPHTEYFCKWKQLYYDSCTWE-----CASTV 115

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALN 765
            S+  D   ++  ++L        +  G     + +   L  QP+ +K G L   QL  +N
Sbjct: 116  SNAQDQIDKYLNRSLSPILPHKSVSYG---SSRPKFKKLDVQPDYIKNGELRDFQLTGVN 172

Query: 766  WLRKCWHKSKNVILADE--MGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAE 823
            W+   W K++N ILADE  MGLGKT    +F+S L        P L++VPLST+P W   
Sbjct: 173  WMAYLWSKNENGILADEVFMGLGKTAQTVSFLSYLVHTLHIHGPFLIVVPLSTIPAWQEN 232

Query: 824  FALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSS 883
               WA +LN + Y G +KAR  I++YE++      ++  +   KFN+L+TTYE IL D  
Sbjct: 233  LETWATDLNSIIYIGNSKARKTIQEYEFY------IDGNSKKLKFNILITTYEYILKDRY 286

Query: 884  HLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQ 943
             L  + W+ + VDE HRLKNS S+L+  L  F   +R+L+TGTPLQNNI E+  L++FL 
Sbjct: 287  ELNQIKWQYMAVDEAHRLKNSESQLYESLKDFKTVNRLLITGTPLQNNIKELAALIDFLM 346

Query: 944  PASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSS 1003
            P  F        +  +      + +L K + P++LRRLKKD  +++P K+ER++ VELS 
Sbjct: 347  PKRFEIDRELNFETPNAEQEAYIRDLHKRLQPYILRRLKKDVEKSLPSKSERILRVELSE 406

Query: 1004 IQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPD-------S 1056
            +Q  +Y+ +LT+NY+ L ++  G +Q ++LNIV++L+K  NHPYL P  E +        
Sbjct: 407  LQTHWYKNILTRNYRAL-SMSTGNSQLNLLNIVIELKKASNHPYLFPNAEENWLNNIGSK 465

Query: 1057 GSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY 1116
             + E +    +  S K+ LL  +L  L ++GHRVLIFSQM ++LDI+ DYL +   P  +
Sbjct: 466  KTREDILRGIVINSGKMILLDKLLTRLKRDGHRVLIFSQMVRMLDIIGDYLVLRGLP--F 523

Query: 1117 ERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 1175
            +R+DG++S   R+A+I  FN   S  FVFLLSTR+ GLGINL TADTVII+DSD+NP AD
Sbjct: 524  QRLDGTISAPIRKASIEHFNAAGSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQAD 583

Query: 1176 IQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLD----QLFVNKSGSQKEVE 1231
            +QAM RAHRIGQ   ++VYR V + +VEE IL+ A++K++L+     +F + + +QK +E
Sbjct: 584  LQAMARAHRIGQKSHVMVYRFVSKDTVEEDILERARRKMILEFGASNMFKD-NDNQKRLE 642

Query: 1232 DILRWGTEELFNDSPGIN-GKDMGENNTSIEEAVRDLE 1268
            D+     +++   +   + G+D+G  +   EE ++  E
Sbjct: 643  DM---NLDDVLEHAENHDIGQDVGGASMGGEEFLKQFE 677


>gi|297297256|ref|XP_002808499.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 2-like [Macaca mulatta]
          Length = 1806

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 273/718 (38%), Positives = 392/718 (54%), Gaps = 110/718 (15%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S IH++W  E  L   KV   +KLEN+K K                 Y   
Sbjct: 306  QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 365

Query: 653  VINICDERWKQPQ---RVISLRSSKD-----------------GTREAFVKWTGLPYDEC 692
               +  E  KQ Q   RVI++++SK                     E   KW GLPY EC
Sbjct: 366  QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSEC 425

Query: 693  TWEKLDEPAL-EKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEEL 751
            +WE  DE  + +K+ +  D F    R   K   + +     K   Q+   VAL +QP  L
Sbjct: 426  SWE--DEALIGKKFQNCIDSF--HSRNNSKTIPTRE----CKALKQRPRFVALKKQPAYL 477

Query: 752  KGG--ALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCL 809
             G    L  +QLE LNWL   W K+ +VILADEMGLGKT+   +F+S L+ + +   P L
Sbjct: 478  GGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFL 537

Query: 810  VLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFN 869
            ++VPLST+ +W  EF +WAP +NVV Y G   +R  IR+YEW       ++ +T   KFN
Sbjct: 538  IVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEW-------IHSQTKRLKFN 590

Query: 870  VLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQ 929
             L+TTYE++L D + L  + W  L VDE HRLKN  S L+  L  F   HR+L+TGTPLQ
Sbjct: 591  ALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 650

Query: 930  NNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNI 989
            N++ E+++LL+F+ P  F     FEE           + L K++ P +LRR+KKD  +++
Sbjct: 651  NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 709

Query: 990  PPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI 1049
            P K E+++ VE+S++Q +YY+ +L                       +         YLI
Sbjct: 710  PAKVEQILRVEMSALQKQYYKXVL-----------------------VWXXXXXXXXYLI 746

Query: 1050 --PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
              P         E L  + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL
Sbjct: 747  KPPEENERENGQEILLSL-IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 805

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIY 1166
             I+  P  ++R+DGS+    R+ A+  FN D S  F FLLSTR+ GLGINLA+ADTV+I+
Sbjct: 806  TIKHYP--FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIF 863

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV----- 1221
            DSD+NP  D+QA  RAHRIGQ K++ +YRLV + +VEE I++ AKKK++LD L +     
Sbjct: 864  DSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDT 923

Query: 1222 -------NKSG-------SQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVR 1265
                   N SG       +++E+  IL++G E+LF +   + G++       I+E +R
Sbjct: 924  TGRTILENNSGRSNSNPFNKEELTAILKFGAEDLFKE---LEGEESEPQEMDIDEILR 978


>gi|68075951|ref|XP_679895.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56500739|emb|CAH95008.1| conserved hypothetical protein [Plasmodium berghei]
          Length = 1536

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 270/684 (39%), Positives = 394/684 (57%), Gaps = 66/684 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENY---------KAKYGTT----VINICD 658
            EFLVKW+GKS+IHN +     L+     +K++NY         K KY T        I  
Sbjct: 221  EFLVKWIGKSHIHNFFCTYEYLRYFNGVKKVDNYIKKIRLSFQKRKYMTADEIEQEKIYS 280

Query: 659  ERWKQ-------PQRVISLRSSKDGTREAF-VKWTGLPYDECTWEKLDEPALEKYSHLTD 710
            E  KQ        +R+I+ R+ +    + F VKWT   YD+CT E         +  L +
Sbjct: 281  EIKKQIEMDSIHAERIITHRTCEITNEQLFLVKWTSCAYDQCTEETKQTLLDHNFGKLIE 340

Query: 711  LFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKC 770
             +  F+R++    A        +G    ++     E P  L G  L  +QL  LNW+   
Sbjct: 341  EY--FDRESKIYGAKALSSIWNRGPLTATKFDPYNETPSYLHGKKLRAYQLTGLNWMVSR 398

Query: 771  WHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPN 830
              ++ +V+LADEMGLGKTV   A +  +  + K   P LVLVP ST+ NWL EF  W P 
Sbjct: 399  MKRNLSVLLADEMGLGKTVQTIAVVGHMLYKEKLIGPYLVLVPQSTVDNWLNEFKNWLPQ 458

Query: 831  LNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI--LADSSHLRGV 888
             NVV YHG A +R +IR YE       N   +   YKF+V +TT  ++  ++D   L+ +
Sbjct: 459  ANVVCYHGNAVSRELIRTYELKKVYVPN---RGYRYKFDVCITTPSILNSVSDVELLKRI 515

Query: 889  PWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 948
            PW+++VVDE H+LKN  SK F  L  F  + ++LL+GTPL NN+ E++ LL+FL P  + 
Sbjct: 516  PWQLMVVDEAHQLKNRQSKRFIELKQFMAESKLLLSGTPLHNNLEELWTLLHFLNPQQYT 575

Query: 949  SLSSFEEKFNDLTTTQKVEELKK---LVAPH-----MLRRLKKDAMQNIPPKTERMVPVE 1000
               +F++K+N++  T  + E K+   +   H     +LRR+KKD  +++P K ER++ VE
Sbjct: 576  YYEAFQKKYNEIENTSLIGEAKQKQLMQLQHELHEVILRRVKKDVEKSLPNKVERILRVE 635

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            LS IQ EYY+ +LTKNY+ L     G A+ S+ NI M+L+KVCNHP+L    EP     E
Sbjct: 636  LSPIQIEYYKNILTKNYEQLAK-ASGGAKNSLQNICMELKKVCNHPFLC--CEPIDKD-E 691

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
            +  E  + +S K+ LL  +L  L + G+RVLIFSQM K+L+IL +YL +  G K ++R+D
Sbjct: 692  Y-RERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLR-GFK-HQRLD 748

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++   R+ A+  FN   S  FVFLLST++ GLGINL +ADTVIIYDSD+NP  D+QA 
Sbjct: 749  GTMTKEMRKKAMNHFNSKNSDDFVFLLSTKAGGLGINLTSADTVIIYDSDWNPQNDLQAG 808

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQL--------------FVNKSG 1225
             RAHRIGQ+K + +YRLV + S+E+ IL+ AK K++LD L              F+   G
Sbjct: 809  ARAHRIGQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKKQNDNVNFIGGEG 868

Query: 1226 S-------QKEVEDILRWGTEELF 1242
            S       ++E+  IL++G+++L+
Sbjct: 869  SNSSNGFTREELSKILKFGSQKLW 892


>gi|159125579|gb|EDP50696.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus
            fumigatus A1163]
          Length = 1509

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 254/675 (37%), Positives = 385/675 (57%), Gaps = 58/675 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPES--------QLKVLAKRKLENYKAKYGT------------T 652
            E+L+KW G S  H SW+P S         ++    R  +N++                  
Sbjct: 506  EYLIKWKGHSYHHTSWMPGSWVWGIVSPSMRRAFFRSEKNFQPHMTIEEAIPEDFLRVDI 565

Query: 653  VINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA-LEKYSHLTDL 711
            V  +C     + + + S          A++K+ GLPY+E  W+   +P+  E+++     
Sbjct: 566  VFQVCYSEEVEERSLESDLQRIHKVTRAYMKFKGLPYEEAEWDSPPDPSQTERWNDFKAA 625

Query: 712  FVQFERQTL----KKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
            +  + ++      +  A +  L   +    +S+IV  T QPE + GG L  +Q + +NWL
Sbjct: 626  YDDWVKRDYIYMPEPKALQKHLAHIREQNFESQIVRDT-QPETMTGGQLMDYQKDGVNWL 684

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K +N ILADEMGLGKT+    F ++L  ++    P LV+VP ST PNW  E   W
Sbjct: 685  YYMWFKQQNAILADEMGLGKTIQVIGFFATL-IQYHKCWPFLVVVPNSTCPNWRKEIKSW 743

Query: 828  APNLNVVEYHGCAKARAIIRQYE-WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH-- 884
             P++ VV Y+G A AR + +++E +   +PD         + +V++T+YE I+ D+S   
Sbjct: 744  VPSIRVVTYYGSALARKLAQEHELFSQGEPD--------LRCHVVVTSYETIIDDASRRV 795

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L  +PW  LVVDEG RLKN  S+L+  L+ F F  ++LLTGTPLQNN  E++NLL F  P
Sbjct: 796  LMKIPWAGLVVDEGQRLKNDKSQLYESLSRFKFPFKLLLTGTPLQNNTRELFNLLQFCDP 855

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
                  +  +EK+  L+  + + EL  ++ P  LRR K   +  +PP  + +VPV +S +
Sbjct: 856  TK--DAARLDEKYGTLSK-ENIPELHNMIRPFFLRRTKAQVLTFLPPIAQIIVPVSMSVV 912

Query: 1005 QAEYYRAMLTKNYQILRNI------GKGVAQ---QSMLNIVMQLRKVCNHPYLIP-GTEP 1054
            Q + Y+++L KN Q+++ I       +GV Q    ++ NI+MQLRK   HP++     E 
Sbjct: 913  QKKLYKSILAKNPQLIKAIFQRNNNSEGVKQADRHNLNNILMQLRKCLCHPFVYSEAIEE 972

Query: 1055 DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPK 1114
             + +    H+  ++AS KL LL  ML  L + GHRVLIFSQ    LDI+ED+L+   G  
Sbjct: 973  RTANSAASHKHLVEASGKLKLLEIMLPKLKQRGHRVLIFSQFLDNLDIVEDFLD-GLG-L 1030

Query: 1115 TYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPH 1173
             + R+DG ++  ++Q  I  +N D S  F FLLSTRS G+GINLATADTVII D DFNPH
Sbjct: 1031 LHRRLDGRMTSLEKQKRIDEYNADNSPYFAFLLSTRSGGVGINLATADTVIIMDPDFNPH 1090

Query: 1174 ADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----SGSQKE 1229
             D+QA++RAHRIGQ  ++LV++L+ R SVEE+I+Q+ KKK++LD + +++     G  ++
Sbjct: 1091 QDMQALSRAHRIGQKNKVLVFQLMTRGSVEEKIMQIGKKKMVLDHVLIDRMVAEEGDGRD 1150

Query: 1230 VEDILRWGTEELFND 1244
            +E ILR G + LFND
Sbjct: 1151 LESILRHGAQTLFND 1165


>gi|301097967|ref|XP_002898077.1| chromodomain protein, putative [Phytophthora infestans T30-4]
 gi|262105438|gb|EEY63490.1| chromodomain protein, putative [Phytophthora infestans T30-4]
          Length = 1004

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 278/783 (35%), Positives = 419/783 (53%), Gaps = 108/783 (13%)

Query: 587  SGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVL---AKRKLE 643
            S SVA    EP V+        A    FLVKW   S +H SW  E +L      AK K++
Sbjct: 115  SASVAP--SEPKVSVEDDEAEDAGEERFLVKWKTLSYLHTSWQTEEELLETDKNAKGKIQ 172

Query: 644  NYKAK-----YGTTVIN--ICDERWKQPQRVISLRS------SKDGTREA-------FVK 683
             ++ K     Y   V      +  ++   R++ +R       + D T +         VK
Sbjct: 173  RFREKELRAFYSQAVQGDEYFNPEFRSVDRILEIRDRPLDDFAPDDTVDGESNFQYFLVK 232

Query: 684  WTGLPYDECTWEKLDE----PALEKYS-HLTDLFVQFERQTLKKDASEDELPRGKGDCQQ 738
            W  LPYDE +WE+ D+     A+E+Y+  +     +F++  L K     +    +G   +
Sbjct: 233  WKALPYDEISWEREDDVGDDAAVEQYNDRIVRAAKRFKKIALAKHLPPSKRKNFRGYTAE 292

Query: 739  SEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSL 798
            S      EQ  +L+      +QL  +NW+   W++ +N +LADEMGLGKTV    +I+ L
Sbjct: 293  SRPPCRKEQTFQLRD-----YQLTGVNWMLFNWYQKRNSMLADEMGLGKTVQTVMYINHL 347

Query: 799  YCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDP-- 856
                +   P +++ PLST+ +W  EF  W  NLN V YHG A AR +++ YE+  S+   
Sbjct: 348  AVVERTPQPFIIVAPLSTLGHWQREFDSWT-NLNAVVYHGSAAAREVLQNYEFFMSEDEL 406

Query: 857  ---DNLNKKTSS------------YKFNVLLTTYEMILA-DSSHLRGVPWEVLVVDEGHR 900
               D L +K ++            Y+F+VL+TTYEM  A D   L  + W+++VVDE HR
Sbjct: 407  LRVDELTRKDNNGKRAAPQPKRNCYRFDVLITTYEMASATDLYKLAQINWQLMVVDEAHR 466

Query: 901  LKNSGSKLFSLLNS-FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            LKN  SKL ++L++ F++++ +LLTGTPLQNN+ E++ LLNFL    F S  SF E F +
Sbjct: 467  LKNRNSKLSNILHTRFTYENMLLLTGTPLQNNVEELWVLLNFLDTKKFASKESFLESFGE 526

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
            LT + +VE L   + P++LRR+K+D  +++ PK E ++ VEL+ +Q +YYRA+  KN + 
Sbjct: 527  LTDSAQVERLHSELKPYLLRRMKEDVEKSLAPKEETIIEVELTVLQKQYYRAIYEKNTEF 586

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE----------PDSGSVEF---LHEMR 1066
            L   G+     S++N++M+LRK CNHP+L+ G E           +    E    + E  
Sbjct: 587  LSRGGRKGDTPSLMNVLMELRKCCNHPFLVKGVEEREVKRLAKQANVSKEEIQRQISESL 646

Query: 1067 IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTY--ERVDGSVS 1124
            +  S KL LL  +L  L + GHRVLIFSQ   +LDI++DYL +    + Y  ER+DG+++
Sbjct: 647  VDTSGKLVLLDKLLPRLKETGHRVLIFSQFKIMLDIIQDYLAL----RRYNCERIDGNIT 702

Query: 1125 VGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAH 1183
              +RQ+AI RF  +D + F+ LLSTR+ G+GINL  ADTVIIYDSD+NP  D+QA  R H
Sbjct: 703  GNERQSAIDRFCREDSNSFIMLLSTRAGGVGINLTAADTVIIYDSDWNPQNDLQAQARCH 762

Query: 1184 RIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFV---------------------N 1222
            RIGQ K + +YRL+   + E  +   A  KL LDQ  +                     N
Sbjct: 763  RIGQKKSVKIYRLLTAKTYELHMFHKASLKLGLDQAVLGGIKSDDSVAKLKGAAKTPKTN 822

Query: 1223 KSGSQKEVEDILRWGTEELFNDSPG---INGKDMGE---------NNTSIEEAVRDLEQK 1270
               S++E+E++L+ G  E+F +         K  GE         + T + +  RD++ K
Sbjct: 823  DRMSKEEIENLLKHGAYEMFKEQDSEAEAASKKFGEESIDQILSRSTTIVHDPTRDVDGK 882

Query: 1271 HRK 1273
             +K
Sbjct: 883  EKK 885


>gi|70993280|ref|XP_751487.1| chromatin remodeling complex subunit (Chd3) [Aspergillus fumigatus
            Af293]
 gi|66849121|gb|EAL89449.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus
            fumigatus Af293]
          Length = 1509

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 254/675 (37%), Positives = 385/675 (57%), Gaps = 58/675 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPES--------QLKVLAKRKLENYKAKYGT------------T 652
            E+L+KW G S  H SW+P S         ++    R  +N++                  
Sbjct: 506  EYLIKWKGHSYHHTSWMPGSWVWGIVSPSMRRAFFRSEKNFQPHMTIEEAIPEDFLRVDI 565

Query: 653  VINICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTWEKLDEPA-LEKYSHLTDL 711
            V  +C     + + + S          A++K+ GLPY+E  W+   +P+  E+++     
Sbjct: 566  VFQVCYSEEVEERSLESDLQRIHKVTRAYMKFKGLPYEEAEWDSPPDPSQTERWNDFKAA 625

Query: 712  FVQFERQTL----KKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWL 767
            +  + ++      +  A +  L   +    +S+IV  T QPE + GG L  +Q + +NWL
Sbjct: 626  YDDWVKRDYIYMPEPKALQKHLAHIREQNFESQIVRDT-QPETMTGGQLMDYQKDGVNWL 684

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K +N ILADEMGLGKT+    F ++L  ++    P LV+VP ST PNW  E   W
Sbjct: 685  YYMWFKQQNAILADEMGLGKTIQVIGFFATL-IQYHKCWPFLVVVPNSTCPNWRKEIKSW 743

Query: 828  APNLNVVEYHGCAKARAIIRQYE-WHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH-- 884
             P++ VV Y+G A AR + +++E +   +PD         + +V++T+YE I+ D+S   
Sbjct: 744  VPSIRVVTYYGSALARKLAQEHELFSQGEPD--------LRCHVVVTSYETIIDDASRRV 795

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L  +PW  LVVDEG RLKN  S+L+  L+ F F  ++LLTGTPLQNN  E++NLL F  P
Sbjct: 796  LMKIPWAGLVVDEGQRLKNDKSQLYESLSRFKFPFKLLLTGTPLQNNTRELFNLLQFCDP 855

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
                  +  +EK+  L+  + + EL  ++ P  LRR K   +  +PP  + +VPV +S +
Sbjct: 856  TK--DAARLDEKYGTLSK-ENIPELHNMIRPFFLRRTKAQVLTFLPPIAQIIVPVSMSVV 912

Query: 1005 QAEYYRAMLTKNYQILRNI------GKGVAQ---QSMLNIVMQLRKVCNHPYLIP-GTEP 1054
            Q + Y+++L KN Q+++ I       +GV Q    ++ NI+MQLRK   HP++     E 
Sbjct: 913  QKKLYKSILAKNPQLIKAIFQRNNNSEGVKQADRHNLNNILMQLRKCLCHPFVYSEAIEE 972

Query: 1055 DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPK 1114
             + +    H+  ++AS KL LL  ML  L + GHRVLIFSQ    LDI+ED+L+   G  
Sbjct: 973  RTANSAASHKHLVEASGKLKLLEIMLPKLKQRGHRVLIFSQFLDNLDIVEDFLD-GLG-L 1030

Query: 1115 TYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPH 1173
             + R+DG ++  ++Q  I  +N D S  F FLLSTRS G+GINLATADTVII D DFNPH
Sbjct: 1031 LHRRLDGRMTSLEKQKRIDEYNADNSPYFAFLLSTRSGGVGINLATADTVIIMDPDFNPH 1090

Query: 1174 ADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----SGSQKE 1229
             D+QA++RAHRIGQ  ++LV++L+ R SVEE+I+Q+ KKK++LD + +++     G  ++
Sbjct: 1091 QDMQALSRAHRIGQKNKVLVFQLMTRGSVEEKIMQIGKKKMVLDHVLIDRMVAEEGDGRD 1150

Query: 1230 VEDILRWGTEELFND 1244
            +E ILR G + LFND
Sbjct: 1151 LESILRHGAQTLFND 1165


>gi|402593631|gb|EJW87558.1| helicase [Wuchereria bancrofti]
          Length = 2673

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 252/659 (38%), Positives = 380/659 (57%), Gaps = 60/659 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDERWKQP----QR 666
            + VK+  K+ IH  W  +  L+   +R   KL+ +  K   +     DE++       +R
Sbjct: 867  YFVKYKNKAYIHCQWKSQYDLEAGDRRAAAKLKRFHQKRAHSSDQDEDEQFNSDFVIVER 926

Query: 667  VISLRSSKDGTREAFVKWTGLPYDECTWEKLD---EPALEKYSHLTDLFVQFERQTLKKD 723
            V+   +  +G     VKW  LPY+E TWEK++   E  +E Y           R T    
Sbjct: 927  VLDA-NELEGEDFVLVKWKSLPYEEVTWEKVEIIPEDKIEAYKL---------RNTCDSL 976

Query: 724  ASEDELPRGKGDCQQSEIVALTEQPEELK---GGALFPHQLEALNWLRKCWHKSKNVILA 780
              + +L     D         ++ PE++       L  +Q E +NWL  C++  +N ILA
Sbjct: 977  KVKPKLHPSASD--------WSKIPEDITFKDNNRLREYQFEGVNWLLYCYYNKQNCILA 1028

Query: 781  DEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCA 840
            DEMGLGKTV    F+  +Y ++    P L++VPLST+ NW  EF  W  ++N + YHG A
Sbjct: 1029 DEMGLGKTVQTICFLQRVY-DYGIHGPFLIVVPLSTIHNWQREFETWT-DMNTIVYHGSA 1086

Query: 841  KARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
             +R II+Q E++    +    K +  KF+ L+TT+EM+++D   L+ + ++V ++DE HR
Sbjct: 1087 ASRQIIQQTEFYYRPEELKGGKRNIVKFDALITTFEMVVSDCDVLKQINYQVCIIDEAHR 1146

Query: 901  LKNSGSKLFSLLNSFSF-QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            LKN   KL +        +HRVLLTGTPLQNNI E+Y+LLNFL+P  F S S+F E+F  
Sbjct: 1147 LKNRNCKLLTSGLLSLTAEHRVLLTGTPLQNNIEELYSLLNFLEPEQFYSSSAFLEQFGQ 1206

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
              T  +V+ L+ ++ P MLRRLK+D  + + PK E ++ ++LS+ Q +YYRA+L +N+  
Sbjct: 1207 CQTEDQVQRLQDILKPMMLRRLKEDVEKTLQPKEETIIEIQLSNTQKKYYRAILERNFS- 1265

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE-----------PDSGSVEFLHEMRIK 1068
              ++ KG +  S++N +M+LRK CNHP+LI G E           PD    +      ++
Sbjct: 1266 --HLCKGTSVPSLMNAMMELRKCCNHPFLISGAEEQILAEVKAGHPDWSEDDIYQHALVQ 1323

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            +S KL L+  +L  L  +GH+VLIFSQM ++LDI+E++L  +    T+ER+DG+V    R
Sbjct: 1324 SSGKLVLIAKLLPKLRTDGHKVLIFSQMVRVLDIIEEFLVAQN--YTFERIDGNVRGDLR 1381

Query: 1129 QAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            Q+AI RF+ +D  RF+FLL TR+ GLGINL  ADTVII+DSD+NP  D+QA  R HRIGQ
Sbjct: 1382 QSAIDRFSKKDSDRFIFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQ 1441

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG---------SQKEVEDILRWG 1237
            +K + VYRL+   + E  +   A  KL LD+  +  +          S+KE+E++L+ G
Sbjct: 1442 TKMVKVYRLITCNTYEREMFDKASLKLGLDRAVLQSTTALKDTSQQLSRKEIEELLKKG 1500


>gi|170590139|ref|XP_001899830.1| Associated with TFs and helicases family protein [Brugia malayi]
 gi|158592749|gb|EDP31346.1| Associated with TFs and helicases family protein [Brugia malayi]
          Length = 2707

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 253/659 (38%), Positives = 382/659 (57%), Gaps = 60/659 (9%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVLAKR---KLENYKAKYGTTVINICDERWKQP----QR 666
            + VK+  K+ IH  W  +  L+   +R   KL+ +  K   +     DE++       +R
Sbjct: 917  YFVKYKNKAYIHCQWKSQYDLEAGDRRAAAKLKRFHQKRAHSSDQDDDEQFNSDFVIVER 976

Query: 667  VISLRSSKDGTREAFVKWTGLPYDECTWEKLD---EPALEKYSHLTDLFVQFERQTLKKD 723
            V+   +  +G     +KW  LPY+E TWEK++   E  +E Y           R T    
Sbjct: 977  VLDA-NELEGEDFVLIKWKSLPYEEVTWEKVEIVPEDKIEAYKL---------RNTCDSL 1026

Query: 724  ASEDELPRGKGDCQQSEIVALTEQPEEL--KGG-ALFPHQLEALNWLRKCWHKSKNVILA 780
              + +L     D         ++ PE++  KG   L  +Q E +NWL  C++  +N ILA
Sbjct: 1027 KMKPKLHPSASDW--------SKIPEDITFKGNNRLREYQFEGVNWLLYCYYNKQNCILA 1078

Query: 781  DEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCA 840
            DEMGLGKTV    F+  +Y ++    P L++VPLST+ NW  EF  W  ++N + YHG A
Sbjct: 1079 DEMGLGKTVQTICFLQRVY-DYGIHGPFLIVVPLSTIHNWQREFETWT-DMNTIVYHGSA 1136

Query: 841  KARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHR 900
             +R II+Q E++    +    K +  KF+ L+TT+EM+++D   L+ + ++V ++DE HR
Sbjct: 1137 ASRQIIQQTEFYYRPEELKGGKRNVVKFDALITTFEMVVSDCDVLKQINYQVCIIDEAHR 1196

Query: 901  LKNSGSKLFSLLNSFSF-QHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFND 959
            LKN   KL +        +HRVLLTGTPLQNNI E+Y+LLNFL+P  F S S+F E+F  
Sbjct: 1197 LKNRNCKLLTSGLLSLTAEHRVLLTGTPLQNNIEELYSLLNFLEPEQFHSSSAFLEQFGQ 1256

Query: 960  LTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQI 1019
              T  +V+ L+ ++ P MLRRLK+D  + + PK E ++ ++LS+ Q +YYRA+L +N+  
Sbjct: 1257 CQTEDQVQRLQDILKPMMLRRLKEDVEKTLQPKEETIIEIQLSNTQKKYYRAILERNFS- 1315

Query: 1020 LRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE-----------PDSGSVEFLHEMRIK 1068
              ++ KG +  S++N +M+LRK CNHP+LI G E           PD    +      ++
Sbjct: 1316 --HLCKGTSVPSLMNAMMELRKCCNHPFLISGAEEQILAEVKAGHPDWSEDDIYQHALVQ 1373

Query: 1069 ASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDR 1128
            +S KL L+  +L  L  +GH+VLIFSQM ++LDI+E++L  +    T+ER+DG+V    R
Sbjct: 1374 SSGKLVLIAKLLPKLRTDGHKVLIFSQMVRVLDIIEEFLVAQ--NYTFERIDGNVRGDLR 1431

Query: 1129 QAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1187
            Q+AI RF+ +D  RF+FLL TR+ GLGINL  ADTVII+DSD+NP  D+QA  R HRIGQ
Sbjct: 1432 QSAIDRFSKKDSDRFIFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQ 1491

Query: 1188 SKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSG---------SQKEVEDILRWG 1237
            +K + VYRL+   + E  +   A  KL LD+  +  +          S+KE+E++L+ G
Sbjct: 1492 TKMVKVYRLITCNTYEREMFDKASLKLGLDRAVLQSTTALKDTSQQLSRKEIEELLKKG 1550


>gi|350645258|emb|CCD60039.1| hypothetical protein Smp_130470 [Schistosoma mansoni]
          Length = 3580

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 252/668 (37%), Positives = 373/668 (55%), Gaps = 67/668 (10%)

Query: 614  FLVKWVGKSNIHNSWIPESQL---KVLAK-RKLENYKAKYGTTV---INICDERWKQPQR 666
            F +K+   S +H  W    ++   ++L K R+ E  +A    T    + + +  + + +R
Sbjct: 1023 FYLKYKSYSYLHCEWRALDEITDPRILPKIRRFEMKQANSIRTEDDDVVLFNPDYVEVER 1082

Query: 667  VISLRSSKDG----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKK 722
            V+ ++   +G    T +  +KW  L Y++ TWE               L    +   +K+
Sbjct: 1083 VLDVKVYSNGQLVPTEKLELKWRSLAYEDATWE---------------LSQDVDPTKVKE 1127

Query: 723  DASEDELPRGKGDCQQSEIVALTEQPEELK----------GGALFPHQLEALNWLRKCWH 772
                   PR     + +    +   P   K             L  +Q+E +NWL  CW+
Sbjct: 1128 FYKRRYPPRNPFIPRDNNYKIIRPDPSTWKPIDSNTVYKNNNKLRDYQVEGVNWLTFCWY 1187

Query: 773  KSKNVILADEMGLGKTVSACAFISSLYCEFKAKL--PCLVLVPLSTMPNWLAEFALWAPN 830
              +N ILADEMGLGKTV +  F+  +   FKA +  P L++VPLST+ NW  EF  W+ +
Sbjct: 1188 HHRNCILADEMGLGKTVQSVTFLLEI---FKANVEGPFLIIVPLSTVGNWQREFENWS-D 1243

Query: 831  LNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPW 890
             NV+ YHG + +R++I++YE       +   +   YKF+V++TT+E+++ D      + W
Sbjct: 1244 FNVIIYHGSSVSRSMIQEYEMFYRKRTSGAPRHDIYKFHVIVTTFEVLMNDIEFFGQIHW 1303

Query: 891  EVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSL 950
               V+DE HRLKN   KL   L      HRVLLTGTPLQNN+ E++ LLNFL+P  F   
Sbjct: 1304 AAAVIDEAHRLKNKKCKLGEGLRYLDLDHRVLLTGTPLQNNVEELFGLLNFLEPEKFSCS 1363

Query: 951  SSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYR 1010
            ++F  ++ +L T ++VE LK ++ P MLRRLK+D  +++ PK E +V VEL++IQ +YYR
Sbjct: 1364 ATFVAEYGELKTEEQVERLKTVLKPMMLRRLKEDVEKSLAPKEETVVEVELTNIQKKYYR 1423

Query: 1011 AMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF--------- 1061
            A++ +N+  L   G      +++NI+M+LRK CNHP+LI G E D+   EF         
Sbjct: 1424 AIMERNFSFLCK-GSSTNAPNLMNIMMELRKCCNHPFLIKGAE-DAILSEFQANDNTLSE 1481

Query: 1062 ---LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
                    + AS KL L+H +L  L  +GH+VLIFSQM ++LDILEDYL +  G + +ER
Sbjct: 1482 DDLTFRTMVYASGKLVLIHKLLPKLRADGHKVLIFSQMIRVLDILEDYL-VHQGFQ-FER 1539

Query: 1119 VDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            +DG +    RQ AI RF+ D  +FVFLL T++ GLGINL  AD VIIYDSD+NP  D+QA
Sbjct: 1540 IDGRIHGPLRQEAIDRFSIDPDKFVFLLCTKAGGLGINLTAADVVIIYDSDWNPQNDLQA 1599

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS---------QKE 1229
              R HRIGQ K + VYRL+ R + E  +   A  KL LD+  +   GS         +KE
Sbjct: 1600 QARCHRIGQQKMVKVYRLITRNTYEREMFDRASLKLGLDRAVLQSMGSKEARQAQMTKKE 1659

Query: 1230 VEDILRWG 1237
            +ED+L+ G
Sbjct: 1660 IEDLLKKG 1667


>gi|347842029|emb|CCD56601.1| hypothetical protein [Botryotinia fuckeliana]
          Length = 1619

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 249/605 (41%), Positives = 360/605 (59%), Gaps = 38/605 (6%)

Query: 679  EAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKK--DASEDELPRGKGDC 736
            +  VK+ GL YDE  WE  + P+ ++    +D    +    + K    S   + + + D 
Sbjct: 701  QVLVKFRGLAYDESVWE--EPPSPDEADRWSDFVSAYNEYVMGKYFKQSPANVVKERIDA 758

Query: 737  QQS----EIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSAC 792
             +S    + V L +QP  L GG +  HQ+E LNWL   +H+ KNVILADEMGLGKT+   
Sbjct: 759  FRSLNFEKQVVLKKQPASLIGGEMMKHQMEGLNWLLFNFHRQKNVILADEMGLGKTIQIV 818

Query: 793  AFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWH 852
            A I+SL  +     P LV+ P ST PNW  E   WAP L VV Y+G   AR +  +YE +
Sbjct: 819  ALIASLVKDKPKCSPFLVVTPNSTCPNWRREIKKWAPGLRVVAYYGAKSAREMAMKYEMY 878

Query: 853  ASDPDNLNKKTSSYKFNVLLTTYEMILADSS--HLRGVPWEVLVVDEGHRLKNSGSKLFS 910
             ++        S  + ++++T+YE  + DSS    +GV W  ++VDEG RLKN G+ L+ 
Sbjct: 879  PNE-------CSDLRADIVVTSYEAPVDDSSKGFFKGVKWAGMIVDEGQRLKNDGNLLYG 931

Query: 911  LLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELK 970
             L +     +VLL+GTPLQNN  E++NLL FL  +     +  +EK+ DL T + + EL 
Sbjct: 932  ALTALKIPFQVLLSGTPLQNNKRELFNLLQFLDKSI--DAAELDEKYADL-TKENLPELH 988

Query: 971  KLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN-IGKG--- 1026
            +L+ P  LRR K   ++ +PP ++ ++PV +SS+Q + Y+++L KN +++++ IGK    
Sbjct: 989  ELIRPFFLRRTKLQVLKFLPPMSQTIIPVSMSSLQKQLYKSILAKNPELIKSIIGKSDRA 1048

Query: 1027 ---VAQQSMLNIVMQLRKVCNHPYLI-PGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKV 1082
                 + ++ NI+MQLRK   HP+L     E  S + + LH   I AS+K  LL  ML  
Sbjct: 1049 LRPTERGNLNNILMQLRKCLCHPFLYSSAIEETSLTHDALHRNLIDASSKFQLLEIMLPK 1108

Query: 1083 LYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR- 1141
            L   GHRVLIFSQ  K LD++ED+LN    P  ++R+DG+VS  ++Q  I  FN   S  
Sbjct: 1109 LQARGHRVLIFSQFLKQLDLVEDFLNGLQLP--FKRLDGTVSTLEKQKRIDAFNAPNSEL 1166

Query: 1142 FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRAS 1201
            F FLLSTR+ G+GINLATADTVII D DFNPH DIQA++RAHRIGQ K++LV++LV + S
Sbjct: 1167 FAFLLSTRAGGVGINLATADTVIIMDPDFNPHQDIQALSRAHRIGQKKKVLVFQLVTKDS 1226

Query: 1202 VEERILQLAKKKLMLDQLFVN----KSGSQKEVEDILRWGTEELFNDSPGINGKDMGENN 1257
             EE+I+Q+ +KK+ LDQ  +     K  +   +E ILR G E +  D    N KD+  + 
Sbjct: 1227 AEEQIVQVGRKKMALDQALIESIDVKDDAGDNLEAILRHGAEAVLLDD---NSKDIYYDP 1283

Query: 1258 TSIEE 1262
             S++E
Sbjct: 1284 ASVDE 1288


>gi|256073356|ref|XP_002572997.1| hypothetical protein [Schistosoma mansoni]
          Length = 3580

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 252/668 (37%), Positives = 373/668 (55%), Gaps = 67/668 (10%)

Query: 614  FLVKWVGKSNIHNSWIPESQL---KVLAK-RKLENYKAKYGTTV---INICDERWKQPQR 666
            F +K+   S +H  W    ++   ++L K R+ E  +A    T    + + +  + + +R
Sbjct: 1023 FYLKYKSYSYLHCEWRALDEITDPRILPKIRRFEMKQANSIRTEDDDVVLFNPDYVEVER 1082

Query: 667  VISLRSSKDG----TREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKK 722
            V+ ++   +G    T +  +KW  L Y++ TWE               L    +   +K+
Sbjct: 1083 VLDVKVYSNGQLVPTEKLELKWRSLAYEDATWE---------------LSQDVDPTKVKE 1127

Query: 723  DASEDELPRGKGDCQQSEIVALTEQPEELK----------GGALFPHQLEALNWLRKCWH 772
                   PR     + +    +   P   K             L  +Q+E +NWL  CW+
Sbjct: 1128 FYKRRYPPRNPFIPRDNNYKIIRPDPSTWKPIDSNTVYKNNNKLRDYQVEGVNWLTFCWY 1187

Query: 773  KSKNVILADEMGLGKTVSACAFISSLYCEFKAKL--PCLVLVPLSTMPNWLAEFALWAPN 830
              +N ILADEMGLGKTV +  F+  +   FKA +  P L++VPLST+ NW  EF  W+ +
Sbjct: 1188 HHRNCILADEMGLGKTVQSVTFLLEI---FKANVEGPFLIIVPLSTVGNWQREFENWS-D 1243

Query: 831  LNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPW 890
             NV+ YHG + +R++I++YE       +   +   YKF+V++TT+E+++ D      + W
Sbjct: 1244 FNVIIYHGSSVSRSMIQEYEMFYRKRTSGAPRHDIYKFHVIVTTFEVLMNDIEFFGQIHW 1303

Query: 891  EVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSL 950
               V+DE HRLKN   KL   L      HRVLLTGTPLQNN+ E++ LLNFL+P  F   
Sbjct: 1304 AAAVIDEAHRLKNKKCKLGEGLRYLDLDHRVLLTGTPLQNNVEELFGLLNFLEPEKFSCS 1363

Query: 951  SSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYR 1010
            ++F  ++ +L T ++VE LK ++ P MLRRLK+D  +++ PK E +V VEL++IQ +YYR
Sbjct: 1364 ATFVAEYGELKTEEQVERLKTVLKPMMLRRLKEDVEKSLAPKEETVVEVELTNIQKKYYR 1423

Query: 1011 AMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF--------- 1061
            A++ +N+  L   G      +++NI+M+LRK CNHP+LI G E D+   EF         
Sbjct: 1424 AIMERNFSFLCK-GSSTNAPNLMNIMMELRKCCNHPFLIKGAE-DAILSEFQANDNTLSE 1481

Query: 1062 ---LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYER 1118
                    + AS KL L+H +L  L  +GH+VLIFSQM ++LDILEDYL +  G + +ER
Sbjct: 1482 DDLTFRTMVYASGKLVLIHKLLPKLRADGHKVLIFSQMIRVLDILEDYL-VHQGFQ-FER 1539

Query: 1119 VDGSVSVGDRQAAITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQA 1178
            +DG +    RQ AI RF+ D  +FVFLL T++ GLGINL  AD VIIYDSD+NP  D+QA
Sbjct: 1540 IDGRIHGPLRQEAIDRFSIDPDKFVFLLCTKAGGLGINLTAADVVIIYDSDWNPQNDLQA 1599

Query: 1179 MNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS---------QKE 1229
              R HRIGQ K + VYRL+ R + E  +   A  KL LD+  +   GS         +KE
Sbjct: 1600 QARCHRIGQQKMVKVYRLITRNTYEREMFDRASLKLGLDRAVLQSMGSKEARQAQMTKKE 1659

Query: 1230 VEDILRWG 1237
            +ED+L+ G
Sbjct: 1660 IEDLLKKG 1667


>gi|390604671|gb|EIN14062.1| hypothetical protein PUNSTDRAFT_140446 [Punctularia strigosozonata
            HHB-11173 SS5]
          Length = 1678

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 249/588 (42%), Positives = 353/588 (60%), Gaps = 38/588 (6%)

Query: 680  AFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQS 739
            AF+KW  L Y+E TW+    P    Y      F +F      K   + +LP  +   +  
Sbjct: 739  AFIKWGDLGYEESTWDSPPCPNDADYPAFEVAFRRFVSAREIKVVKKRDLPDNRTKNEYK 798

Query: 740  EIVALTE--QPEELKGGAL--FPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFI 795
            +  AL E  QP+  +   L   P QL+ LNWL   W   ++ ILADEMGLGKTV    F+
Sbjct: 799  KKYALVEGQQPDLGQDDTLKLMPFQLDGLNWLCNNWWNLQHCILADEMGLGKTVQIATFL 858

Query: 796  SSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASD 855
             +L   +K   P LV+VP ST+ NW+ EF  WAP L VV ++G AKARA+IR++E     
Sbjct: 859  GTLVERWKV-FPALVVVPNSTLTNWMREFERWAPKLRVVPFYGEAKARAVIREFELR--- 914

Query: 856  PDNLNKKTSSYKFNVLLTTYEMILAD---SSHLRGVP-WEVLVVDEGHRLKNSGSKLFSL 911
                     S  ++VL+TTYE +      SS  +G   WEVLVVDEG RLK+  S +F  
Sbjct: 915  --------DSRNYHVLVTTYETLNNPKDFSSVFKGAGRWEVLVVDEGQRLKSDSSLIFKK 966

Query: 912  LNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKK 971
            L      HRVL+TGTPL NN+ E++NL+NFL P  +  L+  E ++ +L     V +L +
Sbjct: 967  LRELKSIHRVLMTGTPLNNNMRELFNLMNFLDPTEWHDLAGLEREYAELNENL-VRQLHE 1025

Query: 972  LVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGV---- 1027
             + P+ LRR+K + +  +PPK E +VPV ++ +Q E YR++L++N  +LR++ +G     
Sbjct: 1026 KLRPYFLRRMKSEVLP-LPPKNEVIVPVSMAPLQKEIYRSILSQNLDLLRSLTQGSNPNT 1084

Query: 1028 ----AQQSMLNIVMQLRKVCNHPYLIPG-TEPDSGSVEFLHEMRIKASAKLTLLHSMLKV 1082
                 + +M N++MQLRK   HPYL+    EP   S    HE  I ASAKL LL S+L  
Sbjct: 1085 SASGLRANMNNLLMQLRKCLQHPYLVSDDIEPRGLSPAETHEKLIDASAKLRLLRSLLPK 1144

Query: 1083 LYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSRF 1142
            L+  GHR+L+FSQ +  LDI+ED+L  E G K Y R+DG+    DRQ ++  FN++ S +
Sbjct: 1145 LWARGHRILLFSQFSIALDIVEDFLTGE-GVK-YLRLDGNTKQADRQKSMDEFNKEGSIY 1202

Query: 1143 -VFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRAS 1201
             +FLL+TR+ G+GINL +ADTVI++D DFNPH D+QA+ RA+R GQ K  LV++L+V+ S
Sbjct: 1203 SIFLLTTRAGGVGINLWSADTVIVFDPDFNPHQDLQAIARAYRYGQKKTCLVFKLMVKDS 1262

Query: 1202 VEERILQLAKKKLMLDQLFVNKSGSQK----EVEDILRWGTEELFNDS 1245
             EERI+Q  KKKL+LD L V K   ++    +V+ IL +G + LF+ S
Sbjct: 1263 AEERIMQTGKKKLVLDHLIVQKMDDEENGGDDVQSILTFGAKALFDGS 1310


>gi|301122081|ref|XP_002908767.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora
            infestans T30-4]
 gi|262099529|gb|EEY57581.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora
            infestans T30-4]
          Length = 1788

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 267/715 (37%), Positives = 380/715 (53%), Gaps = 88/715 (12%)

Query: 582  VGKKTSGSVAKRVQEPAVTESAQVK---------GKAVSYEFLVKWVGKSNIHNSWIPES 632
            V +K  G   + V EPA T  A             K    E+L+KW G + +H SW  + 
Sbjct: 230  VIEKIMGVRQREVVEPAPTPPADSASANLFANRPAKTTISEYLIKWKGFAYMHASWETKQ 289

Query: 633  QL----------KVLAKRKLENYKAKYGTTVINICDE-------------RWKQPQRVIS 669
             L          K+    + E ++ +Y        DE              + +  R+I+
Sbjct: 290  VLLELDPLTNKQKIKRFHEKEQHRLQYPHRQAGDMDEDSLAADELEYFNPEYLEIHRIIA 349

Query: 670  LRSSK--------------DGTREAFVKWTGLPYDECTWEKL----DEPALEKYSHLTDL 711
             R                 DG R  ++KW  LPY + TWE+     D+ AL KY      
Sbjct: 350  HRQDTPMSADPNFPDAPEDDGMR-YYIKWRILPYTDATWERACDIKDDAALTKY------ 402

Query: 712  FVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPE--ELKGGALFPHQLEALNWLRK 769
                 + ++     E   PR +   +  E   L E P+  E +  +L  +QLE LNWL  
Sbjct: 403  -----KASIVVPDEEVWKPRPRPSIR--EYRKLEESPKFGEDQSLSLRAYQLEGLNWLLW 455

Query: 770  CWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKL--PCLVLVPLSTMPNWLAEFALW 827
             W+  +  ILADEMGLGKT+   +F++ L  + K K+  P L++ PLS +  W  E  +W
Sbjct: 456  NWYNERPSILADEMGLGKTIQTLSFLNLLRDDPKIKIRGPFLIVAPLSLIVQWQNECEMW 515

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
               +N V YHG + +R IIR +E+   D      K  +Y+FN+L+TTYE+ + D + L  
Sbjct: 516  T-TMNCVVYHGNSASREIIRDFEFKYLDDQLRPDKKRTYRFNILVTTYEVAIKDIAVLSK 574

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W  LVVDE HRLKN  S+L   + S    H VLLTGTPLQN   E++ LLNFL   SF
Sbjct: 575  IHWRCLVVDEAHRLKNQSSRLVEQMRSLRRDHCVLLTGTPLQNKTEELWALLNFLDAKSF 634

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
            PS+S F  KF DL   Q+V +L K++ P++LRR+K+D  +++PPK E +V VEL+ +Q +
Sbjct: 635  PSVSDFLAKFGDLHEAQQVADLHKMLKPYLLRRVKEDVEKSLPPKEETIVEVELTPVQKQ 694

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFL----- 1062
            +YRA+  +N   L   G      +++N++M+LRK CNHPYL  G E      E L     
Sbjct: 695  WYRAIYERNTSFLNRGGNPRNVPNLMNVMMELRKCCNHPYLNNGVE------EILNEGLT 748

Query: 1063 -----HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
                 HEM +K   K+ L+  +L  L   GH+VLIFSQM ++LDI+EDYL   +    YE
Sbjct: 749  TDTQRHEMLVKCCGKMVLIDKLLPRLNDGGHKVLIFSQMVRVLDIIEDYLR--YCGYLYE 806

Query: 1118 RVDGSVSVGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG++   DRQAA+ RF   +  RFV LLST++ GLG+NL  ADTVII+DSD+NP  D+
Sbjct: 807  RLDGNIRGNDRQAAVDRFVKPEYKRFVMLLSTKAGGLGLNLTAADTVIIFDSDWNPQNDL 866

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVE 1231
            QA  RAHRIGQ+  + +YRL+ R + E  +   A  KL LD+  +     + E E
Sbjct: 867  QAQARAHRIGQTHSVKIYRLITRKTYEMHMFHKASLKLGLDKAVLTHMRRENEEE 921


>gi|70950861|ref|XP_744718.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56524786|emb|CAH76731.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 1330

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 273/706 (38%), Positives = 402/706 (56%), Gaps = 66/706 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENY---------KAKYGTT----VINICD 658
            EFLVKW+GKS+IHN +     L+     +K++NY         K KY T        I  
Sbjct: 383  EFLVKWIGKSHIHNFFCTYEYLRYFNGVKKVDNYIKKIRLSFQKRKYMTADEIEQEKIYS 442

Query: 659  ERWKQ-------PQRVISLRSSKDGTREAF-VKWTGLPYDECTWEKLDEPALEKYSHLTD 710
            E  KQ        +R+++ R  +    + F VKWT   YD+CT E         +  L +
Sbjct: 443  EIKKQIEMDSIHAERIVTHRKCEITNEQLFLVKWTSCAYDQCTEETRQTLLDHNFGKLIE 502

Query: 711  LFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKC 770
             +  F+R++    A        +G    ++     E P  L+G  L  +QL  LNW+   
Sbjct: 503  EY--FDRESKIYGAKALSSIWNRGPLTATKFDPYNETPSYLQGKKLRAYQLTGLNWMVSR 560

Query: 771  WHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPN 830
              ++ +V+LADEMGLGKTV   A +  +  + K   P LVLVP ST+ NWL EF  W P 
Sbjct: 561  MKRNLSVLLADEMGLGKTVQTIAVVGHMLYKEKLIGPYLVLVPQSTVDNWLNEFKNWLPQ 620

Query: 831  LNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI--LADSSHLRGV 888
             NVV YHG A +R +IR YE       N   +   YKF+V +TT  ++  ++D   L+ +
Sbjct: 621  ANVVCYHGNAVSRELIRTYELKKVYVPN---RGYRYKFDVCITTPSILNSVSDVELLKRI 677

Query: 889  PWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 948
            PW+++VVDE H+LKN  SK F  L  F  + ++LL+GTPL NN+ E++ LL+FL P  + 
Sbjct: 678  PWQLMVVDEAHQLKNRQSKRFIELKQFMAESKLLLSGTPLHNNLEELWTLLHFLNPQQYT 737

Query: 949  SLSSFEEKFNDLTTTQKVEELKK---LVAPH-----MLRRLKKDAMQNIPPKTERMVPVE 1000
               +F++K+N++  T  + E K+   +   H     +LRR+KKD  +++P K ER++ VE
Sbjct: 738  YYEAFQKKYNEIENTSLIGEAKQKQLMQLQHELHEVILRRVKKDVEKSLPNKVERILRVE 797

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            LS IQ EYY+ +LTKNY+ L     G A+ S+ NI M+L+KVCNHP+L    EP     E
Sbjct: 798  LSPIQIEYYKNILTKNYEQLAK-ASGGAKNSLQNICMELKKVCNHPFLC--CEPIDKD-E 853

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
            +  E  + +S K+ LL  +L  L + G+RVLIFSQM K+L+IL +YL +  G K ++R+D
Sbjct: 854  Y-RERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLR-GFK-HQRLD 910

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G+++   R+ A+  FN   S  FVFLLST++ GLGINL +ADTVIIYDSD+NP  D+QA 
Sbjct: 911  GTMTKEMRKKAMNHFNSKNSDDFVFLLSTKAGGLGINLTSADTVIIYDSDWNPQNDLQAG 970

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQL--------------FVNKSG 1225
             RAHRIGQ+K + +YRLV + S+E+ IL+ AK K++LD L              F+   G
Sbjct: 971  ARAHRIGQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKKQNDNVNFIGGEG 1030

Query: 1226 S-------QKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAV 1264
            S       ++E+  IL++G+++L+  +        GE+  +I + V
Sbjct: 1031 SNSSNGFTREELSKILKFGSQKLWEKNSSKYSPQDGEDGKNIIKGV 1076


>gi|317026301|ref|XP_001389337.2| chromatin remodeling complex subunit (Chd3) [Aspergillus niger CBS
            513.88]
          Length = 1282

 Score =  428 bits (1100), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 235/592 (39%), Positives = 353/592 (59%), Gaps = 35/592 (5%)

Query: 675  DGTREAFVKWTGLPYDECTWEKLDEPA--LEKYSHLTDLFVQFERQTLKKDASEDELPRG 732
            D   E +VK+ GLPY+E TW+   E +   E++      +  + ++      ++D L R 
Sbjct: 342  DDVVEMYVKFKGLPYEEATWDTPPERSSNPERWESFRAAYEDWVKREYTHIPNQDNLRRR 401

Query: 733  KGDCQQSEI---VALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTV 789
                ++      V  + QPE + GG +  +Q + L+WL   W+K +N ILADEMGLGKT+
Sbjct: 402  IAHVRKQNFSSNVVKSGQPETMTGGQIMDYQKDGLDWLYYMWYKQQNAILADEMGLGKTI 461

Query: 790  SACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQY 849
                 I++L  ++    P L++VP ST PNW  E   W P+L VV Y+G A +R + + Y
Sbjct: 462  QVIGLIATL-VQYHKCWPFLIVVPNSTCPNWRKEIKTWVPSLRVVTYYGSAFSRKLAQDY 520

Query: 850  EWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH--LRGVPWEVLVVDEGHRLKNSGSK 907
            E  A D        +S + +V++ +YE ++ D+S   L  VPW  L+VDEG RLKN  S+
Sbjct: 521  EMFADD-------DTSLRCHVVVASYETLVDDASRRLLSKVPWAGLIVDEGQRLKNDKSQ 573

Query: 908  LFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVE 967
            L+  L+   F  ++LLTGTPLQNNI E++NLL F  P+        E ++ DL+T + + 
Sbjct: 574  LYDALSRIRFPFKILLTGTPLQNNIRELFNLLQFCDPSK--RADDLENEYGDLST-ENIL 630

Query: 968  ELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIG--- 1024
            EL  ++ P  LRR K   +  +PP  + +VPV ++++Q + Y+ +L KN Q+++ I    
Sbjct: 631  ELHNMIRPFFLRRTKAQVLSFLPPVAQIIVPVSMTTVQKKLYKFILAKNPQLIKAIFQRK 690

Query: 1025 ------KGVAQQSMLNIVMQLRKVCNHPYLIP-GTEPDSGSVEFLHEMRIKASAKLTLLH 1077
                  K   + ++ NI+MQLRK   HP++     E  + +    H   + A+AK  LL 
Sbjct: 691  EGTRALKQTEKHNLNNILMQLRKCLCHPFVYSRAIEEKTSNAAVSHRHLVDAAAKFQLLE 750

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             ML  L   GHRVLIFSQ  + LDI+ED+L  E    TY R+DG +S  ++Q  I  +N 
Sbjct: 751  LMLPKLKNRGHRVLIFSQFLENLDIIEDFL--EGVGLTYLRLDGRMSSLEKQKTIDAYNA 808

Query: 1138 DKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
            ++S  F FLLSTRS G+GINLATADTVII D DFNPH D+QA++RAHRIGQ  ++LV++L
Sbjct: 809  EESPYFAFLLSTRSGGVGINLATADTVIIMDPDFNPHQDMQALSRAHRIGQKNKVLVFQL 868

Query: 1197 VVRASVEERILQLAKKKLMLDQLFVNKSGSQ----KEVEDILRWGTEELFND 1244
            + RAS EE+I+Q+ KKK++LD + +++  S+    +++E ILR G + LF+D
Sbjct: 869  MTRASAEEKIMQIGKKKMVLDHVLIDRMVSEEDDGRDLETILRHGAQALFDD 920


>gi|389751497|gb|EIM92570.1| hypothetical protein STEHIDRAFT_117567 [Stereum hirsutum FP-91666
            SS1]
          Length = 1940

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 253/607 (41%), Positives = 365/607 (60%), Gaps = 39/607 (6%)

Query: 680  AFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQTLKK--DASEDEL-PRGK 733
            AF+KW  L YDE TW+   +  EP    +       VQ +  ++ K   A   E   R K
Sbjct: 833  AFIKWDDLGYDEATWDSPPRKGEPGYSAFQSAFTRLVQSQHVSINKLSRAGYAEYDARRK 892

Query: 734  GDCQQSEIVALTEQPE-----ELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKT 788
            G+ ++   +    QP+     +LK   L   Q++  NWL   W+  +  ILAD+MGLGKT
Sbjct: 893  GEYRRKFALKDDMQPDLGQSPDLK---LMDFQIDGFNWLCNNWYNLQPCILADDMGLGKT 949

Query: 789  VSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQ 848
            V    F+  +  ++ A  P LV+VP ST+ NWL EFA WAP L VV ++G AK R II++
Sbjct: 950  VQIATFVGKIAKQWSA-YPVLVVVPNSTITNWLREFARWAPGLRVVPFYGEAKGREIIKR 1008

Query: 849  YEWHASDPDNLNKKTSSYKFNVLLTTYEMILAD---SSHLRGVP-WEVLVVDEGHRLKNS 904
            YE   S P      TS  KF+VL+TTY+ +      +S  + V  WE L+VDEG RLKN 
Sbjct: 1009 YELRHSQP---TAGTSGLKFHVLVTTYDNVSGSKDFTSVFKNVDRWEALIVDEGQRLKND 1065

Query: 905  GSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQ 964
            GS LF  LN  +  HR+++TGTPL NN+ E++NL+NFL P  +  L++ E++++     +
Sbjct: 1066 GSLLFKKLNELNTIHRIIMTGTPLNNNMRELFNLMNFLDPDQWNDLAALEKEYDQENLNE 1125

Query: 965  K-VEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL--- 1020
            + V+ L + + P+ LRR+K + ++ +PPK E +VP+ L+ +Q E Y+++L+KN  +L   
Sbjct: 1126 ESVKALHERLRPYFLRRVKAEVLK-LPPKNEVIVPLSLTPLQKELYKSVLSKNVTLLTSL 1184

Query: 1021 -RNIG---KGVAQQS-MLNIVMQLRKVCNHPYLI-PGTEPDSGSVEFLHEMRIKASAKLT 1074
             R++G   KG + +S + NI+M+LRK   HPYL+ P  EP   + +  H+  I ASAKL 
Sbjct: 1185 TRSLGQSVKGASNKSNITNILMELRKCIQHPYLLSPDIEPRGLNQQETHKRLIAASAKLR 1244

Query: 1075 LLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITR 1134
            LL  +L  L   GHRVL+FSQ    LDI+ED++N E G K Y R+DG+    DRQ  +  
Sbjct: 1245 LLEVLLPKLKARGHRVLLFSQFVIALDIIEDFINGE-GFK-YLRLDGNTKQADRQKGMDE 1302

Query: 1135 FNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            FN+  S  F++LLSTR+ G+GINL +ADTVII+D DFNPH D+QA+ R+HR GQ+K  LV
Sbjct: 1303 FNRPNSDVFIYLLSTRAGGVGINLWSADTVIIFDPDFNPHQDLQAIARSHRYGQTKPCLV 1362

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVED---ILRWGTEELFNDSPGING 1250
            ++L+ + + EERI+Q  KKKL+LD + V K   ++  ED   IL  G   LF +  G   
Sbjct: 1363 FKLMAKDTAEERIVQNGKKKLILDHVIVQKMDDKETGEDVSSILTHGARALFEEGEGAKD 1422

Query: 1251 KDMGENN 1257
                EN+
Sbjct: 1423 ITYSEND 1429


>gi|170584903|ref|XP_001897230.1| Type III restriction enzyme, res subunit family protein [Brugia
            malayi]
 gi|158595354|gb|EDP33914.1| Type III restriction enzyme, res subunit family protein [Brugia
            malayi]
          Length = 1595

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 266/692 (38%), Positives = 382/692 (55%), Gaps = 120/692 (17%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKV-----LAK--------RKLENYKAKYGTTVINICD- 658
            ++L+KW+G S++HN+W  E+ LK+     L K        R +E +K       I   D 
Sbjct: 288  QYLIKWLGWSHLHNTWESENSLKLCNAKGLKKIDNYMKRLRDIEEWKLTADKEYIEFFDC 347

Query: 659  ---------ERWKQPQRVISLRSSK-----DGTREAFVKWTGLPYDECTWEKLDEPALEK 704
                     E++K  +RVI+ + S+     +GT E FVKW GLPY ECTWE+        
Sbjct: 348  EQQMNDELNEQYKVIERVIAHQISRSQGESEGT-EYFVKWCGLPYSECTWEE-------- 398

Query: 705  YSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQP--EELKGGALF----- 757
              HL  +  QF+    K DA  D   R  G        AL  +P  E+L     F     
Sbjct: 399  -EHL--IKRQFQD---KIDAYYDR--RDNGKIPNKHCPALRRRPKFEKLNNIPSFLQRKD 450

Query: 758  -------PHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLV 810
                    +QLE +NW+   W K  + ILADEMGLGKT+ + +F+S LY +++     LV
Sbjct: 451  DPEHELRDYQLEGVNWMLHAWTKENSCILADEMGLGKTIQSISFLSVLYHKYQLYGTFLV 510

Query: 811  LVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNV 870
            +VPLSTM +W  EF  WAP+LNVV Y G   +R                           
Sbjct: 511  VVPLSTMASWQHEFETWAPDLNVVTYVGDVTSR--------------------------- 543

Query: 871  LLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQN 930
                      D S L    W VL VDE HRLKN  S L+  L  F+  HR+L+TGTPLQN
Sbjct: 544  ----------DLSFLGSFEWAVLAVDEAHRLKNDESLLYRSLFEFTTNHRLLVTGTPLQN 593

Query: 931  NIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIP 990
            ++ E++ LL+F+ P  F S S FE + +D +  + +  L + + P +LRR+KKD  +++P
Sbjct: 594  SLKELWALLHFIMPEKFDSWSEFEAEHHD-SDHKTIASLHRKLQPFLLRRVKKDVEKSLP 652

Query: 991  PKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIP 1050
             K E+++ V++++ Q +YY+ +LTKNY+ L    KG +    +N+VM+L+K CNH  L+ 
Sbjct: 653  AKVEQILRVDMTAQQKQYYKWILTKNYKELSKGVKG-SINGFVNLVMELKKCCNHSSLVR 711

Query: 1051 GTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIE 1110
              +      +   +  +K+S KL LL  +L  L + GHRVLIFSQM  +LDI+++YL + 
Sbjct: 712  SYDQAEEGADARLQQLLKSSGKLILLDKLLCRLQETGHRVLIFSQMVMMLDIMQEYLQLR 771

Query: 1111 FGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSD 1169
              P   +R+DGS+    R+AA+  FN   S  F FLLSTR+ GLGINLATADTVII+DSD
Sbjct: 772  RFPS--QRLDGSMRSDLRKAALDHFNAPNSPDFCFLLSTRAGGLGINLATADTVIIFDSD 829

Query: 1170 FNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS--- 1226
            +NP  D+QAM+RAHRIGQ K++ +YRLV +ASVEE I++ AK+KL+LD L + +  +   
Sbjct: 830  WNPQNDLQAMSRAHRIGQKKQVNIYRLVTKASVEEEIVERAKRKLVLDHLIIQRMDTTGR 889

Query: 1227 ----------------QKEVEDILRWGTEELF 1242
                            ++++  IL++G EELF
Sbjct: 890  TVLSKTTVTNGTMPFDKQDLAMILKFGAEELF 921


>gi|344265411|ref|XP_003404778.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
            protein 1-like [Loxodonta africana]
          Length = 1710

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 271/682 (39%), Positives = 386/682 (56%), Gaps = 74/682 (10%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK---VLAKRKLENYKAK-----------------YGTT 652
            ++L+KW G S+IHN+W  E  LK   V   +KL+NYK K                 Y   
Sbjct: 315  QYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC 374

Query: 653  VINICDERWKQPQ---RVISLRSSKD--GTREAFVKWTGLPYDECTWEKLDEPAL--EKY 705
               + D+  KQ Q   R+I+  + K   G  + + KW GLPY EC+WE   + AL  +K+
Sbjct: 375  QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALISKKF 431

Query: 706  SHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLE 762
                D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL 
Sbjct: 432  QACIDEY--FSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLN 485

Query: 763  ALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLA 822
             LNWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  
Sbjct: 486  GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR 545

Query: 823  EFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADS 882
            E   WA  +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D 
Sbjct: 546  EIQTWASQMNAVVYLGDINSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDK 598

Query: 883  SHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
            + L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+
Sbjct: 599  AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 658

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P  F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S
Sbjct: 659  MPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS 717

Query: 1003 SIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVE 1060
            ++Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E
Sbjct: 718  ALQKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE 776

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
             L  + I++S KL LL  +L  L  E    L FSQ   + DIL D    ++    + R+D
Sbjct: 777  ALQHL-IRSSGKLILLDKLLIRLRDEAIEFLFFSQWCDV-DILADIW--KYRQFXFXRLD 832

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            GS+    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA 
Sbjct: 833  GSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 892

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS--- 1226
             RAHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS   
Sbjct: 893  ARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPS 952

Query: 1227 ------QKEVEDILRWGTEELF 1242
                  ++E+  IL++G EELF
Sbjct: 953  SSTPFNKEELSAILKFGAEELF 974


>gi|146165350|ref|XP_001014826.2| SNF2 family N-terminal domain containing protein [Tetrahymena
            thermophila]
 gi|146145551|gb|EAR94494.2| SNF2 family N-terminal domain containing protein [Tetrahymena
            thermophila SB210]
          Length = 1612

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/603 (39%), Positives = 355/603 (58%), Gaps = 54/603 (8%)

Query: 682  VKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQ---FERQTLKKDASEDELPRGKGDCQQ 738
            +KW GL YDECT+E  DE  + KY  +   ++Q   FE         E+   + K + Q 
Sbjct: 575  IKWQGLFYDECTFE--DEFIVLKYKEILRKYLQIKMFEETIGTPRFQEERENKRKINTQV 632

Query: 739  SEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSL 798
             +     +QP  + GG+L   Q++ +NWL + ++K+ NVILADEMGLGKTV   +F++ L
Sbjct: 633  QK--KYKQQPNFITGGSLHKFQIDGVNWLSESYNKANNVILADEMGLGKTVQTVSFLNYL 690

Query: 799  YCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDN 858
            Y E     P +V+ P ST+ NWL EFA+W    NV+ Y G   +R+++R  E++    + 
Sbjct: 691  YYEKDIDGPFMVVAPASTLYNWLREFAIWGDKFNVLVYTGNQASRSLVRHREFYFKIKNP 750

Query: 859  LNKKTSSY----KFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNS 914
            L K         KFN L+T+Y+  + D+  LR + WE LVVDE HRLKN+ SK F + ++
Sbjct: 751  LKKGKKKKDLVPKFNALITSYDTAINDAHFLRKIQWECLVVDEAHRLKNNESKFFKISST 810

Query: 915  FSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE-------------------- 954
             + +H+VLLTGTPLQNNI E+ NL+ F+ P    ++ +FE                    
Sbjct: 811  IATRHKVLLTGTPLQNNILELLNLIEFICPQKAKTMKNFESLKMFLQTTTTQTKQQQQQD 870

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
            E+  +    + + EL K++APH+LRR K D    +P   E ++ + L+  Q  YY+ +L 
Sbjct: 871  EQIPEAERKKALSELTKMLAPHLLRRKKTDVDLELPEMEEIIIKISLTDTQKYYYKNVLV 930

Query: 1015 KNYQILRNI---GKGVAQQSMLNIVMQLRKVCNHP--------YLIPGTEPDSGSVEFLH 1063
            KNY  L+ +    K  ++ S+LNI+M LR VCNHP        YLIP  + D    EF  
Sbjct: 931  KNYDNLKLLDAKSKNFSKFSLLNILMSLRLVCNHPSLFLYKKKYLIP--KKDKFQEEF-- 986

Query: 1064 EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
               +  S KL  L  M+  L ++ H++LIFSQ T +LDI+ ++ N  F    +ER+DG+ 
Sbjct: 987  ---VDCSNKLKFLERMIPKLLQQNHKMLIFSQFTMMLDIMGEFFN--FKGWAFERLDGTT 1041

Query: 1124 SVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
            SV DRQ  I  FN +D    +FLLSTR+ GLGINL +ADT+   DSDFNP+ D+QA++RA
Sbjct: 1042 SVIDRQKTIDSFNSKDSKAKIFLLSTRAGGLGINLTSADTIFFTDSDFNPYRDVQAISRA 1101

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN--KSGSQKEVEDILRWGTEE 1240
            +R+GQ  ++ VYRLV + S EERI+++A +KL+L+ + +N     ++++ E IL+ GT E
Sbjct: 1102 YRMGQESKVKVYRLVSKYSAEERIIEIATRKLLLESIIINPINKFTKEDFETILKNGTYE 1161

Query: 1241 LFN 1243
            +FN
Sbjct: 1162 MFN 1164



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 78  CVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPKCTQKN 123
           C IC   G L+CC++C +T+HL C+   +K+ P G W+CP C ++N
Sbjct: 299 CFICRDQGKLICCENCSKTFHLTCV--GIKKPPTGAWECPYCREEN 342


>gi|328768321|gb|EGF78368.1| hypothetical protein BATDEDRAFT_35805 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1991

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 262/700 (37%), Positives = 395/700 (56%), Gaps = 55/700 (7%)

Query: 580  VDVGKKTSGSVAKRVQEPAVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVL-- 637
            + VG+K++G V K +     +E+ +        E LVK+ G S  H  W+  S L++   
Sbjct: 162  ISVGEKSAG-VDKFLSYRVTSENTE--------ELLVKYKGMSYFHAEWVERSSLEIERG 212

Query: 638  AKRKLENYKAKYGTTVIN---ICDERWKQPQRVISLRSSKDGTREAFVKWTGLPYDECTW 694
            A+ +++ + +K      +     +  + +  R+I      DGT    VKW  L Y+  TW
Sbjct: 213  ARNRIQKFLSKPSWDHYSEDEPFNPSFTRIDRIIDC-GEHDGTIMFLVKWCALSYEHSTW 271

Query: 695  EKLDEPALEKYSHLTDLFVQFERQTLK--KDASEDELPRGKGDCQQSEIVALTEQPEELK 752
            E   E  L     + + +   +R  LK  K  S + + R +  C     V L + P    
Sbjct: 272  ESQQEVELIDADKIAEYY---DRNALKPIKRLSYNLIGRSRPACCW---VKLEDSPIYKN 325

Query: 753  GGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLV 812
               L  +QLE L+WL  CW+  +N ILADEMGLGKTV +  F+  L+ +   + P L++ 
Sbjct: 326  DNMLRSYQLEGLDWLMFCWYNKQNSILADEMGLGKTVQSTVFLYQLFLQENLRGPFLIVT 385

Query: 813  PLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLL 872
            PLST+ NW  E   W  ++NVV YHG   AR +I + E++  D +     +   KF+++L
Sbjct: 386  PLSTIGNWEREIKAWT-DMNVVVYHGSQSARNLIVETEYYYRD-ETGEIVSDMLKFDIVL 443

Query: 873  TTYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNI 932
            TTYEM ++ +S LR +PW  +V+DE HRLKN  SK+  +L +++ +HRVLLTGTPLQN++
Sbjct: 444  TTYEMAMSGASQLRPIPWRCVVLDEAHRLKNKSSKVTEILKTYTMEHRVLLTGTPLQNSL 503

Query: 933  GEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPK 992
             E++ LLNFL+P  F S + F   +  L +   VE+L+ ++ P MLRRLK+D  ++IP K
Sbjct: 504  DELWALLNFLEPHKFASETDFRLNYASLNSAADVEKLQNVLKPLMLRRLKEDVEKSIPVK 563

Query: 993  TERMVPVELSSIQAEYYRAMLTKNYQILRN-IGKGVAQQSMLNIVMQLRKVCNHPYLIPG 1051
             E +V VEL++ Q ++YR++L KN+  L+    K     +++N +++LRK C HP+L+ G
Sbjct: 564  EETIVEVELTTTQKKWYRSILEKNFSWLKQGTLKKTNVPNLINTMIELRKCCIHPWLLKG 623

Query: 1052 TEP------DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILED 1105
             E       ++ + E      I++S K+ L+  +LK L + GH+VLIFSQMTK LD+++D
Sbjct: 624  AEDQILDELNARTNEQQFNALIQSSGKMVLIDKLLKKLKQGGHKVLIFSQMTKCLDLIQD 683

Query: 1106 YLNIEFGPKTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVI 1164
            YL        YER+DG V    RQA+I RF+   S  FVFLL TR+ G+GINL  ADT I
Sbjct: 684  YLRSRGW--LYERIDGGVRGDLRQASIDRFSAPGSESFVFLLCTRAGGVGINLTAADTCI 741

Query: 1165 IYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK- 1223
            I+DSD+NP  D+QA +R HRIGQ K + +YRL+ R + E  +   A  KL LD+  + + 
Sbjct: 742  IFDSDWNPQNDLQAQSRCHRIGQKKPVQIYRLITRNTYEREMFDRASMKLGLDKALLQRM 801

Query: 1224 ------------SGSQK-------EVEDILRWGTEELFND 1244
                        +GS K       EVE++L+ G    F D
Sbjct: 802  DMQGESGFAGFDAGSSKSSALTTEEVEELLKKGAYGAFMD 841


>gi|348682915|gb|EGZ22731.1| hypothetical protein PHYSODRAFT_388148 [Phytophthora sojae]
          Length = 1020

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 263/716 (36%), Positives = 397/716 (55%), Gaps = 95/716 (13%)

Query: 614  FLVKWVGKSNIHNSWIPESQLKVL---AKRKLENYKAKYGTTVIN--ICDERWKQPQ--- 665
            FL+KW   S +H SW  E +L      AK K++ +  K    +    +  + +  P+   
Sbjct: 154  FLIKWKTLSYLHTSWQTEDELMETDKNAKGKIQRFSEKEHRALYTQEVQGDEYFNPEFRS 213

Query: 666  --RVISLRS----------SKDGTREA---FVKWTGLPYDECTWEKLDE----PALEKYS 706
              R++ +R           ++DG ++     VKW  L YD+ TWE+ D+     A+++Y+
Sbjct: 214  VDRILEIRDRPLDDFAPDDAEDGEQKFQYFLVKWKALSYDDITWEREDDVGDDAAVQQYN 273

Query: 707  -HLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALN 765
              +     +F +  L K     +    +G   ++      EQ  +L+      +QL  +N
Sbjct: 274  DRIVRAAKRFRKIALAKHLPNSKRKNFRGYTAEAPPPRRKEQSFQLRD-----YQLTGVN 328

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            W+   W++ +N +LADEMGLGKTV    +I+ L    +   P +++ PLST+ +W  EF 
Sbjct: 329  WMLFNWYQKRNSMLADEMGLGKTVQTVMYINHLAVVERTPNPFIIVAPLSTLGHWQREFE 388

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASD-----PDNLNKKTSS-------------YK 867
             W  NLN V YHG A AR I++ YE+  ++      D L+ KT+S             Y+
Sbjct: 389  CWT-NLNAVVYHGSAAARDILQNYEFFLTEDELLRADGLSGKTNSNGKKAPPRPKRNCYR 447

Query: 868  FNVLLTTYEMILA-DSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNS-FSFQHRVLLTG 925
            F+VL+TTYEM  A D   L  + W+++VVDE HRLKN  SKL +LL++ F+F++ +LLTG
Sbjct: 448  FDVLITTYEMASATDLYKLAQINWQLMVVDEAHRLKNRNSKLSNLLHTRFTFENMLLLTG 507

Query: 926  TPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDA 985
            TPLQNN+ E++ LLNFL    F S   F E F +LT + +VE L   + P++LRR+K+D 
Sbjct: 508  TPLQNNVEELWVLLNFLDDKKFNSKEDFLESFGELTDSAQVERLHSELKPYLLRRMKEDV 567

Query: 986  MQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNH 1045
             +++ PK E ++ VEL+ +Q +YYRA+  KN + L   GK     S++N++M+LRK CNH
Sbjct: 568  EKSLAPKEETIIEVELTVLQKQYYRAIYEKNTEFLSRGGKKGDTPSLMNVLMELRKCCNH 627

Query: 1046 PYLIPGTE---------PDSGSVEFLH----EMRIKASAKLTLLHSMLKVLYKEGHRVLI 1092
            P+L+ G E           S S E +     E  +  S KL LL  +L  L + GHRVLI
Sbjct: 628  PFLVKGVEEREVKRLAKQTSVSKEDIQRQIRESLVDTSGKLVLLDKLLPRLKETGHRVLI 687

Query: 1093 FSQMTKLLDILEDYLNIEFGPKTY--ERVDGSVSVGDRQAAITRF-NQDKSRFVFLLSTR 1149
            FSQ   +LDI++DYL +    + Y  ER+DG+++  +RQ+AI RF  +D + F+ LLSTR
Sbjct: 688  FSQFKIMLDIIQDYLAL----RRYNCERIDGNITGNERQSAIDRFCRKDSTSFIMLLSTR 743

Query: 1150 SCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQL 1209
            + G+GINL  ADTVIIYDSD+NP  D+QA  R HRIGQ K + +YRL+   + E  +   
Sbjct: 744  AGGVGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQKKSVKIYRLLTSKTYELHMFHK 803

Query: 1210 AKKKLMLDQLFV---------------------NKSGSQKEVEDILRWGTEELFND 1244
            A  KL LDQ  +                     N   S++E+E++L+ G  E+F +
Sbjct: 804  ASLKLGLDQAVLGGIKNDDPVAKLKGSAKTSKPNDRMSKEEIENLLKHGAYEMFKE 859


>gi|392571080|gb|EIW64252.1| hypothetical protein TRAVEDRAFT_158327 [Trametes versicolor FP-101664
            SS1]
          Length = 1791

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 248/590 (42%), Positives = 356/590 (60%), Gaps = 32/590 (5%)

Query: 680  AFVKWTGLPYDECTWE---KLDEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDC 736
            AF+KW  L YD+ +W+   +L E     Y +    F+  +  T+     +  + +     
Sbjct: 748  AFLKWDDLGYDDASWDSPPRLSETGHAAYLNAFKRFIFAQSVTVPLRDKKQGVMKAGPQW 807

Query: 737  QQSEIVALTEQPE--ELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAF 794
             + +      QPE  +     L P Q++ +NWL   W+ S+N ILADEMGLGKTV    F
Sbjct: 808  LKKKAFTTEAQPELGQASQFKLMPFQVDGVNWLCHNWNISQNCILADEMGLGKTVQIVTF 867

Query: 795  ISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHAS 854
            I  L   FK   P LV+VP ST+ NW+ EF  WAP L VV ++G AK+R II++YE   +
Sbjct: 868  IGYLATAFKC-FPALVVVPNSTITNWVREFERWAPKLRVVPFYGEAKSRDIIKKYELFHN 926

Query: 855  DPDNLNKKTSSYKFNVLLTTYEMILADSSH---LRGVP-WEVLVVDEGHRLKNSGSKLFS 910
            +P +    T+  K++VL+TTYE +          + VP WE LVVDEG RLK+  S +F 
Sbjct: 927  NPAS---GTTGAKYHVLVTTYETVTNAKEFTPVFKSVPRWEALVVDEGQRLKSDASLIFK 983

Query: 911  LLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELK 970
             L   +  HR+++TGTPL NNI E++NL+NFL P  +  L +   ++ +LT    V+EL 
Sbjct: 984  RLKELNSFHRIIMTGTPLNNNIRELFNLMNFLDPEEWRDLEALSRQYEELTD-DLVKELH 1042

Query: 971  KLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIG------ 1024
              + P+ LRR+K + +Q +PPK E +VPV ++S+Q E YR++L++N  IL ++       
Sbjct: 1043 VRLKPYFLRRIKSEVLQ-LPPKNEVIVPVTMASLQKEVYRSILSQNLDILNSLSGNNGAS 1101

Query: 1025 ---KGVAQQSMLNIVMQLRKVCNHPYLIPGT-EPDSGSVEFLHEMRIKASAKLTLLHSML 1080
                   + +M N++MQLRK   HPYL+  T EP     +  H+  + ASAKL LL  +L
Sbjct: 1102 KNSNATTKSNMNNMLMQLRKCIQHPYLVSETIEPRGLPPQETHDRLVGASAKLRLLKLLL 1161

Query: 1081 KVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ-DK 1139
              L   GHRVL+FSQ    LDI+ED+L I  G K Y R+DG+    DRQ  +  FN+ D 
Sbjct: 1162 PKLRTRGHRVLLFSQFVIALDIIEDFL-IGEGVK-YLRLDGNTKQADRQKGMDEFNKADS 1219

Query: 1140 SRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVR 1199
              F++LL+TR+ G+GINL +ADTVII+D DFNPH D+QA+ RAHR GQ K +LV++L+V+
Sbjct: 1220 DIFIYLLTTRAGGVGINLWSADTVIIFDPDFNPHQDLQAIARAHRYGQKKTVLVFKLMVK 1279

Query: 1200 ASVEERILQLAKKKLMLDQLFVNK----SGSQKEVEDILRWGTEELFNDS 1245
             S EERI+Q  KKKL+LD L V K    SGS+++V+ IL +G + LF ++
Sbjct: 1280 DSAEERIMQTGKKKLVLDHLIVQKMDDESGSKEDVQSILMFGAKALFEET 1329


>gi|428164865|gb|EKX33876.1| hypothetical protein GUITHDRAFT_45412, partial [Guillardia theta
            CCMP2712]
          Length = 754

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 261/686 (38%), Positives = 389/686 (56%), Gaps = 57/686 (8%)

Query: 609  AVSYEFLVKWVGKSNIHNSW-IPESQLKVLAKRKLENYKAKYGTTVI--------NICDE 659
            + S  +L+KW  KS +H +W  P++      K +L N+ +K+   +         +  D 
Sbjct: 8    SFSERYLIKWRDKSYLHVTWESPDTIFAEGGKIRLNNFISKWWDVIRWEVEDRGGDYFDP 67

Query: 660  RWKQPQRVISLR-----SSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHL-TDLFV 713
             + + +R+++ R       +D   E   KW  LPY E TWE+ +       S + ++   
Sbjct: 68   TFAEVERIVASRERPEEGEEDAVMEYLCKWRNLPYAEATWERRESIVDSVGSQVASEKIR 127

Query: 714  QFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHK 773
            QFE  +   D   ++ P  +   Q  +I    ++    KG +L  +Q E +NWL   W +
Sbjct: 128  QFELFSKIPDNKREKRPPVERISQSEDIEDYVKECF-FKGNSLREYQREGVNWLIFNWLQ 186

Query: 774  SKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNV 833
             +  ILADEMGLGKTV A  F+S L  +   + P LV+ PLST+P+WL E   W  +LN 
Sbjct: 187  RRGSILADEMGLGKTVQAVGFMSWLNQKQGRRGPFLVVAPLSTIPHWLREVEAWT-DLNA 245

Query: 834  VEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH---LRGVPW 890
            + +HG   +R II +YE++  D D   K +   KFNVL+TT+E+++ D  +   L  + W
Sbjct: 246  IVFHGNQDSRDIIFKYEFYFLD-DEHRKVSEELKFNVLITTWEVVMKDEENGGILADIMW 304

Query: 891  EVLVVDEGHRLKNSGSKLFSLLNSFSF----------QHRVLLTGTPLQNNIGEMYNLLN 940
            + ++VDE HRLKN  SK F+ L SF             H VL+TGTPLQNN  E++ LL+
Sbjct: 305  DCVIVDEAHRLKNKSSKTFTSLKSFKAVPPCSNPDDAAHCVLMTGTPLQNNTEELWCLLH 364

Query: 941  FLQPASFPSLSSFEEKF-NDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPV 999
            FL P +F +L  F +++ N   T  ++ EL+K + P MLRR K+D  ++IPPK E +V V
Sbjct: 365  FLSPNNFDNLELFLDRYGNPPETAGQIVELRKALQPFMLRRHKEDVEKSIPPKEEIIVEV 424

Query: 1000 ELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDS--G 1057
            E+S +Q   Y+++L KN+  LR   KG    ++ N+ M+LRK CNHPYLI G E      
Sbjct: 425  EMSQLQRTTYKSILEKNFDWLRKGAKGAQVPALRNVEMELRKCCNHPYLIDGVEEQVCLA 484

Query: 1058 SVEFLHEMR------------IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILED 1105
             ++FL ++R            I  S K+ LL  +L  L  E HRVLIFSQ  ++LD+LE 
Sbjct: 485  RLKFLRQVRSHSSGADMLQQLIFHSGKMVLLDKILPKLRTEHHRVLIFSQFIRVLDMLEK 544

Query: 1106 YLNIEFGPKTYERVDGSVSVGDRQAAITRFN-QDKSRFVFLLSTRSCGLGINLATADTVI 1164
            Y+  +  P  +ER+DG +    RQ+AI R+N Q   RFVFL+ T++ G+GINL TADTVI
Sbjct: 545  YMRAKEFP--FERIDGRIRGNMRQSAIDRYNEQGDHRFVFLICTKAGGMGINLTTADTVI 602

Query: 1165 IYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNK 1223
            I+DSD+NP  D+QA  R HRIGQ++ + +YRL+   + E R+L+ A +K  L+Q +   K
Sbjct: 603  IFDSDWNPQNDLQAQARCHRIGQTREVKIYRLITVKTYERRMLERASQKQGLEQAVITGK 662

Query: 1224 SGS-------QKEVEDILRWGTEELF 1242
             G+       +KE+E +LR G  +LF
Sbjct: 663  QGTKKTSKEDKKELERLLRHGAYDLF 688


>gi|325181644|emb|CCA16095.1| KIAA1416 protein putative [Albugo laibachii Nc14]
          Length = 1788

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 252/661 (38%), Positives = 366/661 (55%), Gaps = 62/661 (9%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVL--------AKRKLENYKAKYGT--------TVINI 656
            E+ +KW   S +H SW     L  L         KR LE  K ++G            ++
Sbjct: 276  EYYIKWKNFSYLHCSWETTDTLLSLDPQTNKQRIKRFLE--KKQFGVKHRVEDEEEEFDV 333

Query: 657  CDER-----------WKQPQRVISLR----SSKDGTREAFVKWTGLPYDECTWEKL---- 697
             D R           + +  R+I+ R    S  D  R   VKW  LPY + TWE+     
Sbjct: 334  GDPRTGEETEYFDPEYLEIHRIIASRKEASSQDDDGRWYLVKWRILPYSDATWERAVDLK 393

Query: 698  DEPALEKYSHLTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA-- 755
            D+ A+E+Y     L  + E + L + +               E   L   P     G+  
Sbjct: 394  DDKAIEQYEASLHLPPKIEWEPLPRPSLR-------------EYRKLEASPSFGIDGSLQ 440

Query: 756  LFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCE--FKAKLPCLVLVP 813
            L  +QLE LNWL   W+  +  ILADEMGLGKT+   AF+  L  +   + + P L++ P
Sbjct: 441  LRIYQLEGLNWLLWNWYNERPSILADEMGLGKTIQTLAFLDRLRVDPKIQCRGPFLIVAP 500

Query: 814  LSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLT 873
            LS +  W  E   W   +N + YHG  +AR +IR+YE++  + +    K   ++F++++T
Sbjct: 501  LSLIVQWQNECETWT-CMNCIVYHGNTEAREVIREYEFYFMNENGKPDKKKPFRFHIIVT 559

Query: 874  TYEMILADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIG 933
            TYE+ + D + L  + W  L+VDE HRLKN  S+L   L S    H VLLTGTPLQN   
Sbjct: 560  TYEVAIKDIAFLSKIRWRCLIVDEAHRLKNQSSRLVEQLRSLRRDHCVLLTGTPLQNKTE 619

Query: 934  EMYNLLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKT 993
            E++ LLNFL   SFPS+  F +KF DL   ++V +L K++ P++LRR+K+D  +++PPK 
Sbjct: 620  ELWALLNFLDTRSFPSVEEFLDKFGDLHQARQVADLHKMLKPYLLRRVKEDVEKSLPPKE 679

Query: 994  ERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTE 1053
            E ++ VEL+ +Q ++YRA+  KN   L   G      +++N++M+LRK CNHPYL  G E
Sbjct: 680  ETIIEVELTPVQKQWYRAIYEKNTSFLSRGGNPNNIPNLMNVMMELRKCCNHPYLNNGVE 739

Query: 1054 P--DSG--SVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNI 1109
               + G  +    HEM +K   K+ LL  +L  L + GH+VLIFSQM ++LDI+EDYL  
Sbjct: 740  EILNEGLRTERERHEMMVKCCGKMVLLDKLLPRLKEGGHKVLIFSQMVRVLDIIEDYLR- 798

Query: 1110 EFGPKTYERVDGSVSVGDRQAAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDS 1168
             F    YER+DG++   DRQAA+ RF  ++  RFV LLST++ GLG+NL  ADTV+I+DS
Sbjct: 799  -FLGHAYERLDGNIRGNDRQAAVNRFVKEEYKRFVMLLSTKAGGLGLNLTAADTVVIFDS 857

Query: 1169 DFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQK 1228
            D+NP  D+QA  RAHRIGQ+  + +YRL+ R + E  +   A  KL LD+  +     +K
Sbjct: 858  DWNPQNDLQAQARAHRIGQTHSVKIYRLITRKTYEMHMFHKASLKLGLDKAVLTHMRREK 917

Query: 1229 E 1229
            E
Sbjct: 918  E 918


>gi|384493781|gb|EIE84272.1| hypothetical protein RO3G_08982 [Rhizopus delemar RA 99-880]
          Length = 1416

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 252/655 (38%), Positives = 375/655 (57%), Gaps = 42/655 (6%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK--VLAKRKLENYKAKYGTTVINICD-ERWKQPQRVI- 668
            E L+K+   S +H  W+P   ++   L K +++ +  KY        D + + +  RV+ 
Sbjct: 316  ELLIKYKNTSFLHVEWVPLENIENEHLGKHRVKKFLQKYHEEGGKGEDFQEYLKIDRVVD 375

Query: 669  --SLRSSKDGTREAF--VKWTGLPYDECTWEKLDEPALEKYSHLT-DLFVQFERQTLKKD 723
               L     G  + +  VKW G+ YD  TWE   E  + +  H+  D F+  ++   +K 
Sbjct: 376  DGELEDPATGENKIYYLVKWNGMFYDAATWET--EEDVRRVDHVKLDEFISRKQIPPQKL 433

Query: 724  ASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEM 783
            A   + P        +  V     P       L P+QLE LNWLR C++  ++ ILADEM
Sbjct: 434  APTPQRP------DVTRFVQYDSSPVYKYENTLRPYQLEGLNWLRYCYYTFRSCILADEM 487

Query: 784  GLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKAR 843
            GLGKTV + A ++ +Y     + P L++ PLST+P+W   F  W  +LNVV+Y G   AR
Sbjct: 488  GLGKTVQSVALLNDIYHHVGIRGPFLIVAPLSTIPHWTRAFGAWT-DLNVVDYRGGNMAR 546

Query: 844  AIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKN 903
             +I + E++  D +  N  +  YKF+VL+TTYEM  A ++ L+ +PW   V DE HRLKN
Sbjct: 547  KLIMETEFNYQDLEG-NPISGKYKFDVLITTYEMASASAAILKDIPWRCGVFDEAHRLKN 605

Query: 904  SGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTT 963
              SK+  +L +F   H++LLTGTPLQNN+GE+Y+LL+F+ P  +   + F  ++ +L++ 
Sbjct: 606  KNSKVLEVLRTFYIDHKLLLTGTPLQNNLGELYSLLHFMAPHIYDDENYFFSEYGNLSSA 665

Query: 964  QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQIL-RN 1022
             +VE+L+ L+ P MLRR K+D  + IP K E ++ VEL++ Q ++YRA+L KN+  L R 
Sbjct: 666  HEVEKLQALLKPIMLRRFKEDVEKTIPVKEETVIEVELTNPQKKWYRAILEKNFTFLKRG 725

Query: 1023 IGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP-------DSGSVEFLHEMRIKASAKLTL 1075
            +        + NI+MQLRK C HPYL+ G E          G  E  + + +++S KL L
Sbjct: 726  LKNNKDMPHLRNIMMQLRKCCIHPYLLEGVEEVITSECNARGHQEQFNCL-VQSSGKLVL 784

Query: 1076 LHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRF 1135
            +  +L+ L    H+VLIFSQ T  LDIL DYL        YER+DGS+    RQAAI RF
Sbjct: 785  IDKLLRKLILGNHKVLIFSQFTSCLDILADYLRGR--NYAYERIDGSIPGDQRQAAIDRF 842

Query: 1136 NQ--DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            +    +  FVFLL TR+ G+GINL  ADT II+DSD+NP  D+QA  R HRIGQ+K + +
Sbjct: 843  STLPIEESFVFLLCTRAGGVGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQTKPVQI 902

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG--SQKEVEDILRWGT 1238
            YRL+   + E+ +   A  KL LD+  +        NK+   +++E+ED+L+ G 
Sbjct: 903  YRLICANTYEKDMFDRAGMKLGLDKAVMGQHDDGNSNKTSELNRQEIEDLLKKGA 957


>gi|5917754|gb|AAD56022.1|AF181825_1 chromodomain helicase DNA binding protein 1 [Aegolius funereus]
          Length = 918

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 261/620 (42%), Positives = 371/620 (59%), Gaps = 55/620 (8%)

Query: 656  ICDERWKQPQ---RVI--SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTD 710
            + D+  KQ Q   R+I  S + S  G  + + KW GLPY EC+WE   + AL      T 
Sbjct: 2    LTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALIAKKFQTC 58

Query: 711  LFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLEALNWL 767
            +   F R   K    +D     K   Q+   VAL +QP  + G     L  +QL  LNWL
Sbjct: 59   IDEYFSRNQSKTTPFKD----CKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWL 114

Query: 768  RKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALW 827
               W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  E   W
Sbjct: 115  AHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTW 174

Query: 828  APNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRG 887
            AP +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D S L G
Sbjct: 175  APQMNAVVYLGDITSRNMIRTHEW-------MHLQTKRLKFNILLTTYEILLKDKSFLGG 227

Query: 888  VPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASF 947
            + W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+ P  F
Sbjct: 228  LNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKF 287

Query: 948  PSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAE 1007
             S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S++Q +
Sbjct: 288  SSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQ 346

Query: 1008 YYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMR- 1066
            YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI   +P  G+ EF ++   
Sbjct: 347  YYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLI---KPPDGN-EFYNKQEA 401

Query: 1067 ----IKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
                I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+DGS
Sbjct: 402  LQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLDGS 459

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA  R
Sbjct: 460  IKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR 519

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS----- 1226
            AHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS     
Sbjct: 520  AHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSS 579

Query: 1227 ----QKEVEDILRWGTEELF 1242
                ++E+  IL++G EELF
Sbjct: 580  TPFNKEELSAILKFGAEELF 599


>gi|156082073|ref|XP_001608529.1| hypothetical protein [Plasmodium vivax Sal-1]
 gi|148801100|gb|EDL42505.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 3241

 Score =  425 bits (1092), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 268/669 (40%), Positives = 382/669 (57%), Gaps = 47/669 (7%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENY---------KAKYGTT----VINICD 658
            EFL+KW+GKS+IHN +     LK     +K++NY         K KY T        I  
Sbjct: 1214 EFLIKWIGKSHIHNFFCTYDYLKHFNGLKKVDNYIKKIKQSFQKRKYMTADEIEQEKIYS 1273

Query: 659  ERWKQ-------PQRVISLRSSKDGTREAF-VKWTGLPYDECTWEKLDEPALEKYSHLTD 710
            E  KQ        +R+++ R  +    + F VKW    YD+CT E         ++ L +
Sbjct: 1274 EIKKQIEMDAIHAERIVTHRVCEVTGEQLFLVKWMSCAYDQCTEETKQTLVDHGFTKLIE 1333

Query: 711  LFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKC 770
             +   E +     A      RG      ++     E P  L G  L  +QL  LNW+   
Sbjct: 1334 EYFDRESKICGVKAISSAWNRGP--LTATKFDPYNETPFYLNGKKLRAYQLTGLNWMVSR 1391

Query: 771  WHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPN 830
              +S +V+LADEMGLGKTV   A +  +  + K   P LV+VP ST+ NWL EF  W P 
Sbjct: 1392 MKRSLSVLLADEMGLGKTVQTIAVVGHMLYKEKLIGPYLVIVPQSTVDNWLNEFKSWLPQ 1451

Query: 831  LNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI--LADSSHLRGV 888
             NVV YHG A +R +IR +E       N   K   YKF+V +TT  ++  L+D   L+ +
Sbjct: 1452 ANVVCYHGNAVSRELIRTHELKKVYVQN---KGYRYKFDVCITTPSILNSLSDVELLKKM 1508

Query: 889  PWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 948
            PW+++VVDE H+LKN  SK F  L  F  + ++LL+GTPL NN+ E++ LL+FL P  + 
Sbjct: 1509 PWQLMVVDEAHQLKNRQSKRFIELKQFMAESKLLLSGTPLHNNLEELWTLLHFLNPQQYT 1568

Query: 949  SLSSFEEKFNDLTTTQKVEELKK---LVAPH-----MLRRLKKDAMQNIPPKTERMVPVE 1000
               +F++K+N++  T  + E K+   +   H     +LRR+KKD  +++P K ER++ VE
Sbjct: 1569 HYENFQKKYNEIENTSLIGEAKQKQLMQLQHELHEVILRRVKKDVEKSLPNKVERILRVE 1628

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            LS IQ E+Y+ +LTKNY+ L     G A+ S+ NI M+L+KVCNHP+L    EP     +
Sbjct: 1629 LSPIQIEFYKNILTKNYEQLAKASGG-AKNSLQNICMELKKVCNHPFLC--CEPVD--KD 1683

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
               E  + +S K+ LL  +L  L + G+RVLIFSQM K+L+IL +YL +  G K ++R+D
Sbjct: 1684 EYKERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLR-GFK-HQRLD 1741

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G++S   R+ A+  FN   S  FVFLLST++ GLGINL +ADTVIIYDSD+NP  D+QA 
Sbjct: 1742 GTMSKEMRKKAMNHFNSKNSDDFVFLLSTKAGGLGINLTSADTVIIYDSDWNPQNDLQAG 1801

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTE 1239
             RAHRIGQ+K + +YRLV + S+E+ IL+ AK K++LD L V   G  K+  D + +   
Sbjct: 1802 ARAHRIGQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVV--QGLNKKQNDNVNYIGG 1859

Query: 1240 ELFNDSPGI 1248
            E  N S G 
Sbjct: 1860 EGGNTSNGF 1868


>gi|410924259|ref|XP_003975599.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like, partial
            [Takifugu rubripes]
          Length = 2183

 Score =  424 bits (1091), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/493 (47%), Positives = 309/493 (62%), Gaps = 37/493 (7%)

Query: 775  KNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVV 834
            +N ILADEMGLGKT+ +  F+  +Y +   + P LV+ PLST+PNW  EF  W   LNVV
Sbjct: 1    RNCILADEMGLGKTIQSITFLFEMYLK-AIEGPFLVIAPLSTIPNWEREFRTWT-ELNVV 58

Query: 835  EYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLV 894
             YHG   +R  I+ YE +  D      K   Y+F+ ++TT+EMILAD   LR VPW  +V
Sbjct: 59   VYHGSQASRKTIQAYEMYYRDTQGKIIK-GVYRFHAVITTFEMILADCPELRSVPWRCVV 117

Query: 895  VDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFE 954
            +DE HRLKN   KL   L     +H+VLLTGTPLQN + E+++LLNFL+P  FPS  +F 
Sbjct: 118  IDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSEQTFM 177

Query: 955  EKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLT 1014
             +F DL T ++V++L+ ++ P MLRRLK+D  +N+ PK E ++ VEL++IQ +YYRA+L 
Sbjct: 178  TEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILE 237

Query: 1015 KNYQILRNIGKGVAQQ-----SMLNIVMQLRKVCNHPYLIPGTEPDSGSVEF-------- 1061
            KN+  L   G G         ++LN +M+LRK CNHPYLI G E +  + EF        
Sbjct: 238  KNFSFLSKGGSGGGGGGSSVPNLLNTMMELRKCCNHPYLINGAE-EKIAEEFRDTHGTDV 296

Query: 1062 ----LHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYE 1117
                L  M I AS KL L+  +L  L   GHRVL+FSQM + LDILEDYL  +  P  YE
Sbjct: 297  PDMPLQAM-IHASGKLVLIDKLLPKLKAGGHRVLVFSQMVRCLDILEDYLINKRYP--YE 353

Query: 1118 RVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADI 1176
            R+DG V    RQAAI RF++ D  RFVFLL TR+ GLGINL  ADT II+DSD+NP  D+
Sbjct: 354  RIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDL 413

Query: 1177 QAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQ-LFVNKSG---------- 1225
            QA  R HRIGQSK + +YRL+ R S E  +   A  KL LD+ +  + SG          
Sbjct: 414  QAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENANSGVQQ 473

Query: 1226 -SQKEVEDILRWG 1237
             S+KE+ED+LR G
Sbjct: 474  LSKKEIEDLLRKG 486


>gi|119499894|ref|XP_001266704.1| chromatin remodeling complex subunit (Chd3), putative [Neosartorya
            fischeri NRRL 181]
 gi|119414869|gb|EAW24807.1| chromatin remodeling complex subunit (Chd3), putative [Neosartorya
            fischeri NRRL 181]
          Length = 1509

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 253/682 (37%), Positives = 392/682 (57%), Gaps = 62/682 (9%)

Query: 608  KAVSYEFLVKWVGKSNIHNSWIPES--------QLKVLAKRKLENYKAKYGTTVINICDE 659
            K    E+L+KW G S  H SW+P S         ++    R  +N++     T+     E
Sbjct: 500  KEADKEYLIKWKGYSYHHTSWMPGSWVWGIVSPAMRRAFFRSEKNFQPH--MTIEEAIPE 557

Query: 660  RWKQPQRVISLRSSKD--------------GTREAFVKWTGLPYDECTWEKLDEPA-LEK 704
             + +   V  +  S++                  A++K+ GLPY+E  W+   +P+  E+
Sbjct: 558  DFLRVDIVFQVYYSEEVEERSLESDLERIHKVTRAYMKFKGLPYEEAEWDSPPDPSQTER 617

Query: 705  YSHLTDLFVQF-ERQTL---KKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQ 760
            ++     +  + ER  +   ++ A +  L   +    +S++V  T QPE + GG L  +Q
Sbjct: 618  WNDFKAAYDDWVERDYIHMPEQKALQKHLAHIRKQNFESQVVRDT-QPEMMTGGQLMDYQ 676

Query: 761  LEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNW 820
             + +NWL   W K +N ILADEMGLGKT+    F ++L  ++    P LV+VP ST PNW
Sbjct: 677  KDGVNWLYYMWFKQQNAILADEMGLGKTIQVIGFFATL-IQYHKCWPFLVVVPNSTCPNW 735

Query: 821  LAEFALWAPNLNVVEYHGCAKARAIIRQYE-WHASDPDNLNKKTSSYKFNVLLTTYEMIL 879
              E   W P++ VV Y+G A AR + +++E +   +PD         + +V++T+YE ++
Sbjct: 736  RKEIKSWVPSIRVVTYYGSAFARKLAQEHELFSQGEPD--------LRCHVVVTSYETMI 787

Query: 880  ADSSH--LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYN 937
             D+S   L  +PW  LVVDEG RLKN  S+++  L+ F F  ++LLTGTPLQNN  E++N
Sbjct: 788  DDASRRVLMKIPWAGLVVDEGQRLKNDKSQIYESLSRFKFPFKLLLTGTPLQNNTRELFN 847

Query: 938  LLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            LL F  P      +  +E++  L+  + + EL  ++ P  LRR K   +  +PP  + +V
Sbjct: 848  LLQFCDPTK--DAAKLDEEYGTLSK-ENIPELHNMIRPFFLRRTKAQVLTFLPPIAQIIV 904

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNI------GKGVAQ---QSMLNIVMQLRKVCNHPYL 1048
            PV +S +Q + Y+++L KN Q+++ I       +GV Q    ++ NI+MQLRK   HP++
Sbjct: 905  PVSMSVVQKKLYKSILAKNPQLIKAIFQRNNNSEGVKQADRHNLNNILMQLRKCLCHPFV 964

Query: 1049 IP-GTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYL 1107
                 E  + +    H+  ++AS KL LL  ML  L + GHRVLIFSQ    LDI+ED+L
Sbjct: 965  YSEAIEERTANAAASHKHLVEASGKLKLLEIMLPKLKQRGHRVLIFSQFLDNLDIVEDFL 1024

Query: 1108 NIEFGPKTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIY 1166
            +   G   + R+DG ++  ++Q  I  +N D S  F FLLSTRS G+GINLATADTVII 
Sbjct: 1025 D-GLG-LLHRRLDGRMTSLEKQKRIDEYNADNSPYFAFLLSTRSGGVGINLATADTVIIM 1082

Query: 1167 DSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGS 1226
            D DFNPH D+QA++RAHRIGQ  ++LV++L+ R SVEE+I+Q+ KKK++LD + +++  +
Sbjct: 1083 DPDFNPHQDMQALSRAHRIGQKNKVLVFQLMTRGSVEEKIMQIGKKKMVLDHVLIDRMVA 1142

Query: 1227 Q----KEVEDILRWGTEELFND 1244
            +    +++E ILR G + LFND
Sbjct: 1143 EEDDGRDLESILRHGAQALFND 1164


>gi|440804253|gb|ELR25130.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
            castellanii str. Neff]
          Length = 1517

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 242/598 (40%), Positives = 355/598 (59%), Gaps = 33/598 (5%)

Query: 676  GTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDEL-PRGKG 734
            G  E  +KW  LPY++ TWE   E  L   +    L     R+ L   AS   +   G  
Sbjct: 105  GGPEYLIKWRTLPYEDATWEAEAELRLLAPNWAKKLRQFKAREKLPSLASRLTVCTTGAH 164

Query: 735  DCQQSEI-----VALTEQPEELKGGA-----LFPHQLEALNWLRKCWHKSKNVILADEMG 784
            + QQ         A  +  E +   +     L  +Q+E + WL  CW+K +N ILADEMG
Sbjct: 165  NIQQKTFRRPKPSAFDDDAEYVPNYSDPNLTLRDYQVEGIKWLVYCWYKRRNSILADEMG 224

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKT+ + + +  L  E + + P LV+ P+ST+  W  E       +N V +HG  +AR 
Sbjct: 225  LGKTLQSVSILQYLVQEEENRGPFLVVAPMSTIEQWRREVE-GRTFMNCVVFHGTEEARN 283

Query: 845  IIRQYEWHASDPDNLNKKTSS-YKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKN 903
            +IR++E+H +D        S  YKF+VL+TT+EM+L ++  L  + W+ +V+DEGHR+K+
Sbjct: 284  LIRKHEFHYTDSRGRRVGGSGLYKFHVLITTFEMVLKET-FLGNIDWQYMVIDEGHRIKS 342

Query: 904  SGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTT 963
              +KLF  L  ++ QH+++LTGTP+QN+I E++ +L+FL P  F  +  F+ ++ DL T 
Sbjct: 343  KKTKLFQQLFQYNAQHKLILTGTPMQNHIEELWTMLHFLNPEEFDDVDEFKVEYGDLKTK 402

Query: 964  QKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNI 1023
            ++V++L+  + P+MLRR+K+D  + IP K E +V VEL+S Q +YYRA+L KN + L   
Sbjct: 403  EQVDKLQASLRPYMLRRMKEDVDKTIPLKEETIVEVELTSTQKKYYRAILDKNREFLYRG 462

Query: 1024 GKGVAQQSML-NIVMQLRKVCNHPYLIPGTE--------PDSGSVE-----FLHEMRIKA 1069
             K  +    L NI+M+LRK CNHPYLI G E        P  G+         H+  + +
Sbjct: 463  AKSNSNLPQLTNILMELRKCCNHPYLIAGAERRILDDAPPCKGASAEEKDVLAHQALVNS 522

Query: 1070 SAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQ 1129
            S+KL LL  +L  L ++GH+VLIFSQM  +LDILEDYL +   P   ER+DG V   DRQ
Sbjct: 523  SSKLVLLDKLLTKLREDGHKVLIFSQMVMMLDILEDYLIMRGFP--MERLDGGVGRRDRQ 580

Query: 1130 AAITRF-NQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 1188
            AAI RF N +   F FLLSTR+ GLG+NL  A+TVIIYDSD+NP  D+QA  RAHRIGQ+
Sbjct: 581  AAIDRFTNPEVDSFAFLLSTRAGGLGLNLTAANTVIIYDSDWNPQNDLQAQARAHRIGQT 640

Query: 1189 KRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQK--EVEDILRWGTEELFND 1244
            +++ +YR V R + E  +L +  KKL L+   +N     K  +++ +L++G   LF +
Sbjct: 641  QQVKIYRFVTRNTYESYMLDIVSKKLGLESAIMNDDDEMKKEDIDKLLKYGAYHLFQE 698


>gi|384499162|gb|EIE89653.1| hypothetical protein RO3G_14364 [Rhizopus delemar RA 99-880]
          Length = 1532

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 252/654 (38%), Positives = 372/654 (56%), Gaps = 42/654 (6%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLK--VLAKRKLENYKAKYGTTVINICD-ERWKQPQRVI- 668
            E L+K+   S +H  W+P   ++   L K +++ +  KY        D + + +  RVI 
Sbjct: 289  ELLIKYKNTSFLHVEWVPLENIENEHLGKHRVKKFMQKYHEEGGKGEDFQEYIKIDRVID 348

Query: 669  --SLRSSKDGTREAF--VKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDA 724
               L     G  + +  VKW GL YD  TWE   E  + +  +     V+ E    +K  
Sbjct: 349  DGELEDPVTGENKIYYLVKWNGLFYDLSTWET--EEDVRRVDN-----VKLEEFIARKQI 401

Query: 725  SEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
               +L         +  +     P      +L P+QLE LNWLR C++  ++ ILADEMG
Sbjct: 402  PAHKLAPSAARPDVTRFIQYDSSPVYKYNNSLRPYQLEGLNWLRYCYYSFRSCILADEMG 461

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARA 844
            LGKTV + A ++ +Y     + P L++ PLST+P+W   F  W  +LN+V++ G   AR+
Sbjct: 462  LGKTVQSVALLNDIYHHIGIRGPFLIIAPLSTIPHWTRAFGAWT-DLNIVDFRGSHTARS 520

Query: 845  IIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLKNS 904
            +I + E++  D +  N     YKF+VL+TTYE   A ++ L+ +PW   V DE HRLKN 
Sbjct: 521  LIIETEFNYLDMEG-NPIPGKYKFDVLITTYETASASAATLKDIPWRCGVFDEAHRLKNK 579

Query: 905  GSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQ 964
             SK+  +L +F   H++LLTGTPLQNN+GE+Y+LL+F+ P  +     F  ++ +L +  
Sbjct: 580  NSKVLEVLRTFYIDHKLLLTGTPLQNNLGELYSLLHFMAPHIYDDEKYFFSEYGNLNSAH 639

Query: 965  KVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIG 1024
            +VE+L+ L+ P MLRR K+D  + IP K E ++ VEL++ Q ++YRA+L KN+  L+   
Sbjct: 640  EVEKLQALLKPIMLRRFKEDVEKTIPVKEETVIEVELTNPQKKWYRAILEKNFTFLKRGS 699

Query: 1025 KGVAQQSML-NIVMQLRKVCNHPYLIPGTEP-------DSGSVEFLHEMRIKASAKLTLL 1076
            K       L NI+MQLRK C HPYL+ G E          GS E  + + +++S KL L+
Sbjct: 700  KNNKDMPHLRNIMMQLRKCCIHPYLLEGAEEVIVSECNAKGSQEQFNCL-VQSSGKLVLI 758

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPK-TYERVDGSVSVGDRQAAITRF 1135
              +L+ L    H+VLIFSQ T  LDIL DYL    G K  YER+DGS+    RQAAI RF
Sbjct: 759  DKLLRKLILGNHKVLIFSQFTSCLDILADYLR---GRKYAYERIDGSIPGEQRQAAIDRF 815

Query: 1136 NQ--DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1193
            +    +  FVFLL TR+ G+GINL  ADT II+DSD+NP  D+QA  R HRIGQ+K + +
Sbjct: 816  STLPIEESFVFLLCTRAGGVGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQTKPVQI 875

Query: 1194 YRLVVRASVEERILQLAKKKLMLDQLFV--------NKSG--SQKEVEDILRWG 1237
            YRL+   + E+ +   A  KL LD+  +        NK+   +++E+ED+L+ G
Sbjct: 876  YRLICANTYEKDMFDRAGMKLGLDKAVMGTHDDGNTNKTSELNRQEIEDLLKKG 929


>gi|5917756|gb|AAD56024.1|AF181827_1 chromodomain helicase DNA binding protein 1 [Nymphicus hollandicus]
          Length = 918

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 261/620 (42%), Positives = 373/620 (60%), Gaps = 55/620 (8%)

Query: 656  ICDERWKQPQ---RVI--SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPAL--EKYSHL 708
            + D+  KQ Q   R+I  S + S+ G  + + KW GLPY EC+WE   + AL  +K+   
Sbjct: 2    LTDDLHKQYQIVERIIAHSNQKSEAGYPDYYCKWQGLPYSECSWE---DGALIAKKFQAC 58

Query: 709  TDLFVQFERQTLKKDASED-ELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLEAL 764
             D +  F R   K    +D ++ R     Q+   VAL +QP  + G     L  +QL  L
Sbjct: 59   IDEY--FSRNLSKTTPFKDCKILR-----QRPRFVALKKQPSYIGGHESLELRDYQLNGL 111

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NWL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  E 
Sbjct: 112  NWLAHSWCKGNSCILADEMGLGKTIQTISFMNYLFHEHQLYGPFLLVVPLSTLTSWQREI 171

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WAP +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D S 
Sbjct: 172  QTWAPQMNAVVYLGDITSRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDKSF 224

Query: 885  LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP 944
            L G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+ P
Sbjct: 225  LGGLNWVFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLRELWSLLHFIMP 284

Query: 945  ASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSI 1004
              F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S++
Sbjct: 285  EKFSSWEDFEEEHGK-GREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL 343

Query: 1005 QAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVEFL 1062
            Q +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E L
Sbjct: 344  QKQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEAL 402

Query: 1063 HEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGS 1122
              + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  ++R+DGS
Sbjct: 403  QHL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FQRLDGS 459

Query: 1123 VSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNR 1181
            +    R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA  R
Sbjct: 460  IKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR 519

Query: 1182 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS----- 1226
            AHRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS     
Sbjct: 520  AHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSS 579

Query: 1227 ----QKEVEDILRWGTEELF 1242
                ++E+  IL++G EELF
Sbjct: 580  TPFNKEELSAILKFGAEELF 599


>gi|301107063|ref|XP_002902614.1| chromodomain protein, putative [Phytophthora infestans T30-4]
 gi|262098488|gb|EEY56540.1| chromodomain protein, putative [Phytophthora infestans T30-4]
          Length = 1748

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 264/755 (34%), Positives = 395/755 (52%), Gaps = 94/755 (12%)

Query: 538  STEDLGERNDKMVVEDADVSLRDNEGLTVSEIHITCESTDKDVDVGKKTSGSVAKRVQEP 597
            S  +LG+   K V E  D  L D E           +   K+V  G +    V+ R  + 
Sbjct: 486  SGRNLGKAKKKYVDEKLDFELSDEEKAK--------KPKQKEVQKGPQIDKIVSVRFHKN 537

Query: 598  AVTESAQVKGKAVSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGT------ 651
            +       K   VS EFL+KW   S++H SW+   +++   +  ++  K           
Sbjct: 538  SA------KDTEVSMEFLIKWKDTSHLHVSWLSVREIEEFGQHAIQRMKRHLQKNSRLVE 591

Query: 652  ----TVI--------NICDERWKQPQRVISLRSSKDGT-----------REA-------- 680
                TVI        N   + + +  R+++ +  ++             REA        
Sbjct: 592  DARETVIVGEEKDLSNYFSDSYIEVDRILNAKEVEEPEESNPYLVHLLEREASDTEDEPK 651

Query: 681  ---------FVKWTGLPYDECTWEKLDEPALEKYSHLTD-----LFVQFERQTLKKDASE 726
                      VKW  + Y +CTWE  D+        LTD      F +F    +   A  
Sbjct: 652  VPKKKGIKYLVKWRDMSYVDCTWEWEDQ--------LTDDRKIAAFHRFNHPPIINGAH- 702

Query: 727  DELPRGKGDC--QQSEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADEMG 784
               P    D   + +      E P       L  +QLE LNW+  CW+  +N ILADEMG
Sbjct: 703  ---PATYSDVRPEPNTWAKYLESPVYNNQNTLRSYQLEGLNWMTFCWYNRRNCILADEMG 759

Query: 785  LGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYH---GCAK 841
            LGKTV A + +  L      + P LV+ PL+T+ NW  E   W  ++N V YH   G + 
Sbjct: 760  LGKTVQATSILEHLRQREFIRGPFLVVAPLATLGNWKREIETWT-SMNCVVYHDSEGGSD 818

Query: 842  ARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRL 901
             RA IR+ E+H +     ++K   YKFNVL+T+Y+ ++ D+  L  + W  +V+DE H+L
Sbjct: 819  IRAFIREQEFHFAS--EAHRKRGIYKFNVLVTSYQTLMMDAEFLESIHWRYIVIDEAHKL 876

Query: 902  KNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLT 961
            KN  +KL  +L+ F++   +L+TGTPLQN + E++ LLNF++P  FPS   F ++F DL 
Sbjct: 877  KNREAKLLQVLHGFTWDSCLLMTGTPLQNGVFELWCLLNFIEPDKFPSQQEFYDEFGDLN 936

Query: 962  TTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILR 1021
            T ++V +L + + P+MLRR+K+D  ++IPPK E +V VEL+++Q +YYRA+  +N Q L 
Sbjct: 937  TAEQVAQLHEQLRPYMLRRVKEDVEKSIPPKEETIVDVELTTMQKKYYRAIFERNRQFL- 995

Query: 1022 NIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIK----ASAKLTLLH 1077
            N+G      +++N+ M+LRK CNHP+LI G E D   V F  ++R+K    AS K  LL 
Sbjct: 996  NMGATGTVANLVNVEMELRKCCNHPFLIRGVE-DKECVGFDEQLRMKILIQASGKTVLLD 1054

Query: 1078 SMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFNQ 1137
             +L    +E  +VLIFSQ   +LDI+ED   +     + ER+DGSV    RQAAI RFN 
Sbjct: 1055 KLLTKFRQENKKVLIFSQFKIMLDIIEDMCQLR--GYSMERLDGSVRGNSRQAAIDRFNS 1112

Query: 1138 -DKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRL 1196
             D   F FLLSTR+ G+GINL  A  VI++DSD+NP  D+QA+ R HRIGQ++ + +YRL
Sbjct: 1113 PDSDTFAFLLSTRAGGVGINLIAASVVILFDSDWNPQNDLQAVARCHRIGQTQSVNIYRL 1172

Query: 1197 VVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVE 1231
            V + + E ++ ++A KKL +        G + E +
Sbjct: 1173 VTKKTYEAQMFEIASKKLGMHHAVFETGGVRNEFD 1207


>gi|123445199|ref|XP_001311362.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
 gi|121893168|gb|EAX98432.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
          Length = 1639

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 273/731 (37%), Positives = 386/731 (52%), Gaps = 58/731 (7%)

Query: 611  SYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVIN--ICDERWKQPQRVI 668
            S  FLVK+VGK+  H+ WI E +  +  + K++ Y A+      +      ++  P++++
Sbjct: 115  SVSFLVKYVGKAYKHSEWIHEPK-DINNQNKIKKYFARNPLNPPSQPYYPPKYDIPEKIL 173

Query: 669  SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQFERQTLKKDASEDE 728
            + R+  DG  E  V WT L  ++ TWE  DE +L+                 K   SE  
Sbjct: 174  AHRTV-DGKSEYLVLWTDLDREDATWE--DENSLD----------------CKDLISEYN 214

Query: 729  LPRGKGDCQQ------SEIVALTEQPEELKGGALFPHQLEALNWLRKCWHKSKNVILADE 782
             P    +CQ       S+   ++  P+   G  L+ +QL+ LN+L   W K+ N I+ADE
Sbjct: 215  TPPPADECQNRPKGPLSDFKPVSVAPKSKSGKVLYKYQLDGLNFLIHSWFKNNNAIIADE 274

Query: 783  MGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKA 842
            MGLGKT     F+  L    K   P L++VPLST+ +W  E   W  +L V+   G    
Sbjct: 275  MGLGKTAQVSTFLDFLNKSQKIFGPFLIVVPLSTLDHWYRELTDWT-DLKVLILRGTKIE 333

Query: 843  RAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHLRGVPWEVLVVDEGHRLK 902
            R +I + E +        + T   +F ++LTT E+ L   +      W+VLV DE HRLK
Sbjct: 334  RQLIFENELYY-------EGTEIPRFQIMLTTGEIALKSKTVFEQFEWQVLVFDEAHRLK 386

Query: 903  NSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTT 962
            +  SKL   +  F  Q++VL+TGTPLQNNIGE++ LLNF+ P  F   + F E F DL+ 
Sbjct: 387  SHTSKLLLAVKEFKSQYKVLMTGTPLQNNIGELFTLLNFIDPQLFDDRTKFSESFADLSE 446

Query: 963  TQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRN 1022
             +++ ELK+L+ P MLRRLK D  + + P  E ++   ++  Q EYYRA+ TKN + L  
Sbjct: 447  KKQIVELKELIEPFMLRRLKGDVEKKLIPLEEIIIECGMTKSQREYYRAVFTKNQEFLTR 506

Query: 1023 IGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEP------------DSGSVEFLHEMRIKAS 1070
              K     ++ NI M+LRKVCNHPYLI G E                + EF  E  I+ S
Sbjct: 507  CEKR-RLANLNNISMELRKVCNHPYLITGAEDAILIEKMQQLGLKERTNEFELETLIRTS 565

Query: 1071 AKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQA 1130
             KL L+  +L  L KEGHRVLIFSQMTK+LD+L+D L   +    Y R+DG+V   DRQA
Sbjct: 566  GKLILVDKLLANLKKEGHRVLIFSQMTKMLDLLQDMLT--YRNYKYRRIDGTVRGKDRQA 623

Query: 1131 AITRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKR 1190
            +I  F + +  FVFLL TR+ G+GINL +AD  IIYDSD+NP  DIQA  R HRIGQ+K 
Sbjct: 624  SIDDFQEQEDIFVFLLCTRAGGVGINLTSADRCIIYDSDWNPQNDIQATARCHRIGQTKE 683

Query: 1191 LLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQ---KEVEDILRWGTEELFNDSPG 1247
            + +YRL+ + S E  +   A KKL LD+  +         KE+E +++ G    F D   
Sbjct: 684  VKMYRLITKNSYERSMFDTASKKLGLDKAILENDTEHKDAKELEKMIKIGAYHAFEDDEN 743

Query: 1248 INGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTEGS--TKIVWDENAIARLLD 1305
             N  +  E+  +I E  R  +  H    G      Q   TE    TKI  D N   + L 
Sbjct: 744  ANEINEDEDINAIIE--RSEKHIHDPSSGQSFSKIQFNITEKEEDTKIFDDPNFWKKYLG 801

Query: 1306 RSNLQSGSTDL 1316
             +  Q+  TD+
Sbjct: 802  ETPEQNPETDI 812


>gi|261197277|ref|XP_002625041.1| chromatin remodeling complex subunit [Ajellomyces dermatitidis
            SLH14081]
 gi|239595671|gb|EEQ78252.1| chromatin remodeling complex subunit [Ajellomyces dermatitidis
            SLH14081]
          Length = 1542

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 284/826 (34%), Positives = 435/826 (52%), Gaps = 101/826 (12%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAKYGTTVINICD---ERWKQ 663
            ++ E+L+KW  KS    SW+P   +      A RK  +  +K    +I+  D   E + +
Sbjct: 522  IAKEYLIKWRKKSYFQTSWMPGPWVWAKAAPATRKAFSKSSKSLKPIISKEDAIPEEFLR 581

Query: 664  PQRVISLRSSK---------DGTR-----EAFVKWTGLPYDECTWEKLDEPALEKYSHLT 709
               +  L  S          D  R     + +VK+ GLPY++  WE +  P   +  H  
Sbjct: 582  VDIIFDLEYSNVVSNSSLEIDMARVKEVSKIYVKYKGLPYEDAVWETIPSPKETERWHDY 641

Query: 710  DLFVQ------FER----QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPH 759
             +  Q      + R      LKK+     L   +     +++V  T QP  L GG +  +
Sbjct: 642  QMAYQNWVAGKYVRVPKSHILKKN-----LATARSKDFATQLVKKT-QPPLLTGGQIMDY 695

Query: 760  QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPN 819
            Q + LNWL   W+K +N ILADEMGLGKT+   A +++L  + +   P LV+VP ST PN
Sbjct: 696  QKDGLNWLYYMWYKEQNAILADEMGLGKTIQVIALLATLVHDHRC-WPFLVVVPNSTCPN 754

Query: 820  WLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMIL 879
            W  E  +WAP L VV Y+G + AR I   YE     PD     +S  + ++++T+YE ++
Sbjct: 755  WRREIKVWAPKLRVVTYYGSSAARKIAHDYEMF---PDG----SSDLRCHIVVTSYESMI 807

Query: 880  ADSSH--LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYN 937
             +++      +PW  LVVDEG RLKN  + L+  L   +F  ++LLTGTPLQNNI E++N
Sbjct: 808  DETARRLFSNIPWAGLVVDEGQRLKNDKNLLYEALTRINFPFKILLTGTPLQNNIRELFN 867

Query: 938  LLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            ++ F  P+   +  + E+++    T + + EL  ++ P+ LRR K   +  +PP  + ++
Sbjct: 868  IIQFCDPSK--NAEALEQQYGGDFTKETLTELHDMIRPYFLRRTKAQVLTFLPPMAQIIL 925

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVA--------QQSMLNIVMQLRKVCNHPYLI 1049
            PV +S +Q + Y+++L KN Q++++I K             ++ NI+MQLRK   HP++ 
Sbjct: 926  PVTMSVVQKKLYKSILAKNPQLIQSIFKKTPGGTLKRTEHHNLNNILMQLRKCLCHPFVY 985

Query: 1050 P-GTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
                E  + S    H   ++AS+KL LL  +L  L + GHRVLIFSQ    LD++ED+L+
Sbjct: 986  SKAIEERAISAALSHRNLVEASSKLQLLEMLLPKLQERGHRVLIFSQFLDNLDVVEDFLD 1045

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYD 1167
               G   + R+DGS+S   +Q  I  FN  D   F FLLSTRS G+GINLATADTVII D
Sbjct: 1046 -GLG-LLHRRLDGSMSSLQKQKQIDDFNAPDSPYFAFLLSTRSGGVGINLATADTVIIMD 1103

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN----K 1223
             DFNPH DIQA++RAHRIGQ K++LV++LV + S EE+I+Q+ KKK+ LDQ+ +     +
Sbjct: 1104 PDFNPHQDIQALSRAHRIGQRKKVLVFQLVTKGSAEEKIMQIGKKKMALDQVLIEHMDAE 1163

Query: 1224 SGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLG---- 1279
              ++ ++E ILR G + LF+D+      D+  +N SIE+ + D  Q    + G  G    
Sbjct: 1164 DDTEVDLEAILRHGADALFDDA---TTDDIHYDNESIEKLL-DRSQIENTKAGDDGSAES 1219

Query: 1280 ----------DVYQDKCTEGSTK----IVWDE-------------NAIARLLDRSNLQSG 1312
                      D   DK  +  T      VW++              A A+ L R   +  
Sbjct: 1220 QFSFARVWVNDTLSDKLGDSETATPNDTVWNKILQERERIAAEEAKANAQALGRGKRKRQ 1279

Query: 1313 STDLA--EGDLENDMLGSVKATEWNEETTEDQAESPVAAVDDASAE 1356
            + D A     +E  +L S KA+  ++   E Q+  P +  +DA  +
Sbjct: 1280 TVDYAFQYRGVEGHLLSSPKASGKDDTDAEFQSFGPESDPEDADTD 1325


>gi|225559059|gb|EEH07342.1| SHREC complex subunit Mit1 [Ajellomyces capsulatus G186AR]
          Length = 1530

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 261/733 (35%), Positives = 400/733 (54%), Gaps = 62/733 (8%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDERWKQPQRVIS 669
            ++ E+L+KW  KS    SW+P S +   A        A+   ++  I  +    P+  + 
Sbjct: 500  IAKEYLIKWRKKSYFQTSWMPGSWVWAKAAPATRKAFARSSKSLKPIMSKEDAIPEEFLR 559

Query: 670  L------------RSSK---DGTR-----EAFVKWTGLPYDECTWEKLDEPALEKYSH-- 707
            +            R+S    D  R     + +VK+ GLPY++  WE +  P   +  H  
Sbjct: 560  VDIIFDLEYSNVVRNSTLEIDMARVKEVSKIYVKYKGLPYEDAVWETIPSPKETERWHDY 619

Query: 708  ---LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEAL 764
                 D          K    +  L   +     +++V  T QP  L GG +  +Q + L
Sbjct: 620  QRAYQDWVAGKYVHVPKSHIMKKNLTTARSKDFATQLVKKT-QPALLTGGQIMDYQKDGL 678

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NWL   W+K++N ILADEMGLGKT+   A  ++L  + +   P LV+VP ST PNW  E 
Sbjct: 679  NWLYYMWYKNQNAILADEMGLGKTIQVIALFATLVHDHRC-WPFLVVVPNSTCPNWRREI 737

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WAP L VV Y+G A AR I   YE     PD     TS  + ++++T+Y+ ++ D + 
Sbjct: 738  KSWAPWLRVVTYYGTAAARKIAHDYEMF---PDG----TSDLRCHIVVTSYDSMIDDKAR 790

Query: 885  --LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
                 +PW  LVVDEG RLKN  ++L+  L    F  ++LLTGTPLQNNI E++N++ F 
Sbjct: 791  RLFSSIPWAGLVVDEGQRLKNDKNQLYEALTRIHFPFKILLTGTPLQNNIRELFNIIQFC 850

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P+   +    E+++    T +K+ EL  ++ P+ LRR K   + ++PP  + ++PV +S
Sbjct: 851  DPSK--NAEVLEQQYGGDFTKEKLTELHDMIRPYFLRRTKAQVLTSLPPMAQIIIPVTMS 908

Query: 1003 SIQAEYYRAMLTKNYQILRNIG--------KGVAQQSMLNIVMQLRKVCNHPYLIP-GTE 1053
             +Q + Y+++L KN +++R+I         K   + ++ NI+MQLRK   HP++     E
Sbjct: 909  VVQKKLYKSILAKNPELIRSIFERNQGRTLKRTERHNLNNILMQLRKCLCHPFVYSKAIE 968

Query: 1054 PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
              + +    H   ++AS+KL LL  +L  L + GHRVLIFSQ    LD++ED+L+   G 
Sbjct: 969  ERTVNAALSHRNLVEASSKLQLLEMLLPKLQERGHRVLIFSQFLDNLDVMEDFLD-GLG- 1026

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              + R+DGS++   +Q  I  FN   S  F FLLSTRS G+GINLATADTV+I D DFNP
Sbjct: 1027 LLHRRLDGSMTSLQKQKQIDEFNVPGSPYFAFLLSTRSGGVGINLATADTVVIMDPDFNP 1086

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN----KSGSQK 1228
            H DIQA++RAHRIGQ K++LV++LV + S EE+I+Q+ KKK+ LDQ+ +     +  ++ 
Sbjct: 1087 HQDIQALSRAHRIGQRKKVLVFQLVTKGSAEEKIMQMGKKKMALDQVLIEHMDVEDDTEI 1146

Query: 1229 EVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTE 1288
            ++E ILR G + LF+DS      D+  +N +IE+ + D  Q    + G  G       ++
Sbjct: 1147 DLEAILRHGADALFDDS---TTDDIHYDNEAIEKLL-DRSQIENTKAGDDGSAE----SQ 1198

Query: 1289 GSTKIVWDENAIA 1301
             S   VW  N ++
Sbjct: 1199 FSFARVWVNNTLS 1211


>gi|5917753|gb|AAD56021.1|AF181824_1 chromodomain helicase DNA binding protein 1 [Aegolius funereus]
          Length = 918

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 261/619 (42%), Positives = 369/619 (59%), Gaps = 53/619 (8%)

Query: 656  ICDERWKQPQ---RVI--SLRSSKDGTREAFVKWTGLPYDECTWEKLDEPAL--EKYSHL 708
            + D+  KQ Q   R+I  S + S  G  + + KW GLPY EC+WE   + AL  +K+   
Sbjct: 2    LTDDLLKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE---DGALIAKKFQAC 58

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGA---LFPHQLEALN 765
             D +  F R   K    +D     K   Q+   VAL +QP  + G     L  +QL  LN
Sbjct: 59   IDEY--FSRNQSKTTPFKD----CKILKQRPRFVALKKQPSYIGGHESLELRDYQLNGLN 112

Query: 766  WLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFA 825
            WL   W K  + ILADEMGLGKT+   +F++ L+ E +   P L++VPLST+ +W  E  
Sbjct: 113  WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQ 172

Query: 826  LWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSHL 885
             WAP +N V Y G   +R +IR +EW       ++ +T   KFN+LLTTYE++L D S L
Sbjct: 173  TWAPQMNSVVYLGDIISRNMIRTHEW-------MHPQTKRLKFNILLTTYEILLKDKSFL 225

Query: 886  RGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPA 945
             G+ W  + VDE HRLKN  S L+  L  F   HR+L+TGTPLQN++ E+++LL+F+ P 
Sbjct: 226  GGLNWVFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPE 285

Query: 946  SFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQ 1005
             F S   FEE+            L K + P +LRR+KKD  +++P K E+++ +E+S++Q
Sbjct: 286  KFSSWEDFEEEHGK-GREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQ 344

Query: 1006 AEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI--PGTEPDSGSVEFLH 1063
             +YY+ +LT+NY+ L    KG +    LNI+M+L+K CNH YLI  P         E L 
Sbjct: 345  KQYYKWILTRNYKALSKGSKG-STSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQ 403

Query: 1064 EMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSV 1123
             + I++S KL LL  +L  L + G+RVLIFSQM ++LDIL +YL     P  + R+DGS+
Sbjct: 404  HL-IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFP--FRRLDGSI 460

Query: 1124 SVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRA 1182
                R+ A+  FN + S  F FLLSTR+ GLGINLA+ADTV+I+DSD+NP  D+QA  RA
Sbjct: 461  KGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARA 520

Query: 1183 HRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNK----------SGS------ 1226
            HRIGQ K++ +YRLV + SVEE IL+ AKKK++LD L + +          +GS      
Sbjct: 521  HRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSST 580

Query: 1227 ---QKEVEDILRWGTEELF 1242
               ++E+  IL++G EELF
Sbjct: 581  PFNKEELSAILKFGAEELF 599


>gi|156059716|ref|XP_001595781.1| hypothetical protein SS1G_03871 [Sclerotinia sclerotiorum 1980]
 gi|154701657|gb|EDO01396.1| hypothetical protein SS1G_03871 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 2189

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 266/694 (38%), Positives = 390/694 (56%), Gaps = 62/694 (8%)

Query: 613  EFLVKWVGKSNIHNSWIPESQL---------KVLAKR-----------KLENYKAKYGTT 652
            E+LVKW   S    SW+P + +         K   +R           K E    +Y   
Sbjct: 690  EYLVKWDDMSYFQCSWVPGAWVWGVAAATMRKAFIRRDEGANMSPKWTKEEAISEEYLRM 749

Query: 653  VINICDERWKQPQRVISLRSSK---DGTREAFVKWTGLPYDECTWEKLDEP-ALEKYSHL 708
             I I D  + +  R  S    K   +   +  VK+ GL YDE  WE+   P   +++S  
Sbjct: 750  EI-IFDVEYDESFRPKSEEYDKAHINDVVQVLVKFRGLTYDESVWEEPPSPNEADRWSDF 808

Query: 709  TDLFVQFERQTLKKDASEDELPRGKGDCQQS----EIVALTEQPEELKGGALFPHQLEAL 764
               + ++      K +    + + + D  +S    + V L +QP  L GG +  HQ+E L
Sbjct: 809  VSAYNEYVMGKYFKKSPASAV-KKRIDAFRSLNFEKKVVLKKQPASLIGGEMMKHQMEGL 867

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NWL   +H+ KNVILADEMGLGKT+   A I++L  +     P L++ P ST PNW  E 
Sbjct: 868  NWLLFNFHRQKNVILADEMGLGKTIQVIALIATLVKDKPKCSPFLIVTPNSTCPNWRREI 927

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WAP+L VV Y+G   AR +  +YE +   PD      S  + ++++T+YE  + DSS 
Sbjct: 928  KKWAPDLRVVAYYGAKSARDMAMKYEMY---PDG----CSDLRADIVVTSYEAPVDDSSR 980

Query: 885  --LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
               + V W  ++VDEG RLKN G+ L+  L +     +VLL+GTPLQNN  E++NLL FL
Sbjct: 981  AFFKKVKWAGMIVDEGQRLKNDGNLLYGALTALKIPFQVLLSGTPLQNNKRELFNLLQFL 1040

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
              +     +  +EK+ +LT  + + EL +L+ P  LRR K   ++ +PP ++ ++PV +S
Sbjct: 1041 DDSI--DAAELDEKYAELTK-ENLPELHELIRPFFLRRTKLQVLKFLPPMSQTIIPVSMS 1097

Query: 1003 SIQAEYYRAMLTKNYQILRNI-GKG------VAQQSMLNIVMQLRKVCNHPYLIP-GTEP 1054
             +Q + Y+++L KN +++++I GK         + ++ NI+MQLRK   HP+L     E 
Sbjct: 1098 VVQKQLYKSILAKNPELIKSIIGKTNKALRPTERGNLNNILMQLRKCLCHPFLYSSAIEE 1157

Query: 1055 DSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN-IEFGP 1113
             S S E LH   I AS+K  LL  ML  L   GHRVLIFSQ  K LD++ED+LN +E   
Sbjct: 1158 TSLSHEALHRNLIDASSKFQLLEIMLPKLQARGHRVLIFSQFLKQLDLVEDFLNGLEL-- 1215

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              ++R+DG+VS  ++Q  I  FN   S+ F FLLSTR+ G+GINLATADTVII D DFNP
Sbjct: 1216 -PFQRLDGTVSTLEKQKRIDAFNAPNSKLFAFLLSTRAGGVGINLATADTVIIMDPDFNP 1274

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN----KSGSQK 1228
            H DIQA++RAHRIGQ K++LV++LV + S EE+I+Q+ +KK+ LDQ  +     K  +  
Sbjct: 1275 HQDIQALSRAHRIGQKKKVLVFQLVTKGSAEEQIVQVGRKKMALDQALIESIDVKDDAGD 1334

Query: 1229 EVEDILRWGTEELFNDSPGINGKDMGENNTSIEE 1262
             +E ILR G E +  D    + KD+  +  S++E
Sbjct: 1335 NLEAILRHGAEAVLLDD---DSKDVYYDPASVDE 1365


>gi|221054017|ref|XP_002261756.1| SNF2-family protein [Plasmodium knowlesi strain H]
 gi|193808216|emb|CAQ38919.1| SNF2-family protein, putative [Plasmodium knowlesi strain H]
          Length = 3207

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 266/669 (39%), Positives = 382/669 (57%), Gaps = 47/669 (7%)

Query: 613  EFLVKWVGKSNIHNSWIPESQLKVL-AKRKLENY---------KAKYGTT----VINICD 658
            EFL+KW+GKS+IHN +     L++    +K++NY         K KY T        I  
Sbjct: 1228 EFLIKWLGKSHIHNFFCTYEYLRLFNGLKKVDNYIKKIRQSFQKRKYMTADEIEQEKIYS 1287

Query: 659  ERWKQ-------PQRVISLRSSKDGTREAF-VKWTGLPYDECTWEKLDEPALEKYSHLTD 710
            E  KQ        +R++S R   +   + F VKW    YD+CT E         ++ L +
Sbjct: 1288 EIKKQIEMDAINAERIVSHRLCDETGEQLFLVKWMSCAYDQCTEETRQTLVDHGFTKLIE 1347

Query: 711  LFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEALNWLRKC 770
             +   E +     A      RG      ++     E P  L    L  +QL  LNW+   
Sbjct: 1348 EYFDRESKICGLKAFSSVWNRGP--LTATKFDPYNETPFYLNEKKLRAYQLTGLNWMVSR 1405

Query: 771  WHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPN 830
              ++ +V+LADEMGLGKTV   A +  +  + K   P LV+VP ST+ NWL EF  W P 
Sbjct: 1406 MKRNLSVLLADEMGLGKTVQTIAVVGHMLYKEKLIGPYLVIVPQSTVDNWLNEFKSWLPQ 1465

Query: 831  LNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMI--LADSSHLRGV 888
             NVV YHG A +R +IR +E       N   K   YKF+V +TT  ++  L+D   L+ +
Sbjct: 1466 ANVVCYHGNAVSRELIRTHELKKVYVAN---KGFRYKFDVCITTPSILNSLSDVELLKKM 1522

Query: 889  PWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFP 948
            PW+++VVDE H+LKN  SK F  L  F  + ++LL+GTPL NN+ E++ LL+FL P  + 
Sbjct: 1523 PWQLMVVDEAHQLKNRQSKRFIELKQFMAESKLLLSGTPLHNNLEELWTLLHFLNPQQYT 1582

Query: 949  SLSSFEEKFNDLTTTQKVEELKK---LVAPH-----MLRRLKKDAMQNIPPKTERMVPVE 1000
               +F++K+N++  T  + E K+   +   H     +LRR+KKD  +++P K ER++ VE
Sbjct: 1583 HYENFQKKYNEIENTSLIGEAKQKQLMQLQHELHEVILRRVKKDVEKSLPNKVERILRVE 1642

Query: 1001 LSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVE 1060
            LS IQ E+Y+ +LTKNY+ L     G A+ S+ NI M+L+KVCNHP+L    EP     +
Sbjct: 1643 LSPIQIEFYKNILTKNYEQLAKASGG-AKNSLQNICMELKKVCNHPFLC--CEPVD--KD 1697

Query: 1061 FLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVD 1120
               E  + +S K+ LL  +L  L + G+RVLIFSQM K+L+IL +YL +  G K ++R+D
Sbjct: 1698 EYKERLVYSSGKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLR-GFK-HQRLD 1755

Query: 1121 GSVSVGDRQAAITRFNQDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAM 1179
            G++S   R+ A+  FN   S  FVFLLST++ GLGINL +ADTVIIYDSD+NP  D+QA 
Sbjct: 1756 GTMSKEMRKKAMNHFNSKNSDDFVFLLSTKAGGLGINLTSADTVIIYDSDWNPQNDLQAG 1815

Query: 1180 NRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILRWGTE 1239
             RAHRIGQ+K + +YRLV + S+E+ IL+ AK K++LD L V   G  K+  D + +   
Sbjct: 1816 ARAHRIGQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVV--QGLNKKQNDNVNYIGG 1873

Query: 1240 ELFNDSPGI 1248
            E  N S G 
Sbjct: 1874 EGGNTSNGF 1882


>gi|325088120|gb|EGC41430.1| chromodomain helicase [Ajellomyces capsulatus H88]
          Length = 1530

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 263/748 (35%), Positives = 404/748 (54%), Gaps = 62/748 (8%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQLKVLAKRKLENYKAKYGTTVINICDERWKQPQRVIS 669
            ++ E+L+KW  KS    +W+P S +   A        A+   ++  I  +    P+  + 
Sbjct: 500  IAKEYLIKWRKKSYFQTAWMPGSWVWAKAAPATRKAFARSSKSLKPIMSKEDAIPEEFLR 559

Query: 670  L------------RSSK---DGTR-----EAFVKWTGLPYDECTWEKLDEPALEKYSH-- 707
            +            R+S    D  R     + +VK+ GLPY++  WE +  P   +  H  
Sbjct: 560  VDIIFDLEYSNVVRNSTLEIDMARVKEVSKIYVKYKGLPYEDAVWETIPSPKETERWHDY 619

Query: 708  ---LTDLFVQFERQTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPHQLEAL 764
                 D          K    +  L   +     +++V  T QP  L GG +  +Q + L
Sbjct: 620  QRAYQDWVAGKYVHVPKSHIMKKNLTTARSKDFATQLVKKT-QPALLTGGQIMGYQKDGL 678

Query: 765  NWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEF 824
            NWL   W+K +N ILADEMGLGKT+   A  ++L  + +   P LV+VP ST PNW  E 
Sbjct: 679  NWLYYMWYKKQNAILADEMGLGKTIQVIALFATLVHDHRC-WPFLVVVPNSTCPNWRREI 737

Query: 825  ALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMILADSSH 884
              WAP L VV Y+G A AR I   YE     PD     TS  + ++++T+Y+ ++ D + 
Sbjct: 738  KSWAPWLRVVTYYGTAAARKIAHDYEMF---PDG----TSDLRCHIVVTSYDSMIDDKAR 790

Query: 885  --LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFL 942
                 +PW  LVVDEG RLKN  ++L+  L    F  ++LLTGTPLQNNI E++N++ F 
Sbjct: 791  RLFSSIPWAGLVVDEGQRLKNDKNQLYEALTRIHFPFKILLTGTPLQNNIRELFNIIQFC 850

Query: 943  QPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELS 1002
             P+   +    E+++    T +K+ EL  ++ P+ LRR K   + ++PP  + ++PV +S
Sbjct: 851  DPSK--NAEVLEQQYGGDFTKEKLTELHDMIRPYFLRRTKAQVLTSLPPMAQIIIPVTMS 908

Query: 1003 SIQAEYYRAMLTKNYQILRNIG--------KGVAQQSMLNIVMQLRKVCNHPYLIP-GTE 1053
             +Q + Y+++L KN +++R+I         K   + ++ NI+MQLRK   HP++     E
Sbjct: 909  VVQKKLYKSILAKNPELIRSIFERNQGRTLKRTERHNLNNILMQLRKCLCHPFVYSKAIE 968

Query: 1054 PDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGP 1113
              + +    H   ++AS+KL LL  +L  L + GHRVLIFSQ    LD++ED+L+   G 
Sbjct: 969  ERTVNAALSHRNLVEASSKLQLLEMLLPKLQERGHRVLIFSQFLDNLDVMEDFLD-GLG- 1026

Query: 1114 KTYERVDGSVSVGDRQAAITRFNQDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNP 1172
              + R+DGS++   +Q  I  FN   S  F FLLSTRS G+GINLATADTV+I D DFNP
Sbjct: 1027 LLHRRLDGSMTSLQKQKQIDEFNVPGSPYFAFLLSTRSGGVGINLATADTVVIMDPDFNP 1086

Query: 1173 HADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN----KSGSQK 1228
            H DIQA++RAHRIGQ K++LV++LV + S EE+I+Q+ KKK+ LDQ+ +     +  ++ 
Sbjct: 1087 HQDIQALSRAHRIGQRKKVLVFQLVTKGSAEEKIMQMGKKKMALDQVLIEHMDVEDDTEI 1146

Query: 1229 EVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLGDVYQDKCTE 1288
            ++E ILR G + LF+DS      D+  +N +IE+ + D  Q    + G  G       ++
Sbjct: 1147 DLEAILRHGADALFDDS---TTDDIHYDNEAIEKLL-DRSQIENTKAGDDGSAE----SQ 1198

Query: 1289 GSTKIVWDENAIARLLDRSNLQSGSTDL 1316
             S   VW  N ++  L  S   + S  +
Sbjct: 1199 FSFARVWVNNTLSDKLGNSETATPSNTI 1226


>gi|392597559|gb|EIW86881.1| hypothetical protein CONPUDRAFT_161515 [Coniophora puteana RWD-64-598
            SS2]
          Length = 1940

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 255/593 (43%), Positives = 364/593 (61%), Gaps = 40/593 (6%)

Query: 680  AFVKWTGLPYDECTWEKLDEPALEKYSHLTDLFVQF-ERQTL---KKDASEDELPRGKGD 735
            AFVKW  L YDE +W+         Y H    F  F   Q++    K A +D   R K  
Sbjct: 794  AFVKWDDLGYDEASWDAPPRVGESGYEHFEAAFKGFVASQSVIIKSKKAEKDYDKRPKDG 853

Query: 736  CQQSEIVALTEQPE-----ELKGGALFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVS 790
             ++   +   EQP+     +LK   L P Q+E  NWL   W + +  ILADEMGLGKTV 
Sbjct: 854  FRRKHALTEGEQPDLGQNNQLK---LMPFQIEGYNWLCNNWWELQPCILADEMGLGKTVQ 910

Query: 791  ACAFISSLYCEFKAKLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYE 850
               F+ ++  ++ A  P LV+VP ST+ NW+ EF+ WAP+L VV ++G AK+R II +YE
Sbjct: 911  IVTFLGTIIGKWHAS-PALVVVPNSTITNWVREFSRWAPHLRVVPFYGEAKSREIILKYE 969

Query: 851  -WHASDPDNLNKKTSSYKFNVLLTTYEMILAD---SSHLRGVP-WEVLVVDEGHRLKNSG 905
             +H    D + K  +  K++VL+TTYE +      ++  +  P WE LVVDEG RLK+  
Sbjct: 970  MFH----DTVPKGATKAKYHVLVTTYETLTNPRDFTTVFKNTPRWECLVVDEGQRLKSDA 1025

Query: 906  SKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTTQK 965
            S LF  LN  +  HR+++TGTPL NNI E++NL+NFL P ++ +L + E+++ DL   ++
Sbjct: 1026 SLLFKKLNELNTIHRIIMTGTPLNNNIRELFNLMNFLDPENWNNLKALEQEYEDLNE-ER 1084

Query: 966  VEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNI-- 1023
            V EL   + P+ LRR+K + +Q +PPK E +VPV ++ +Q E YR++L++N  IL+++  
Sbjct: 1085 VRELHTKLRPYFLRRIKSEVLQ-LPPKNEVIVPVSMAPLQKEIYRSVLSQNLTILKHLSQ 1143

Query: 1024 ----GKGVA--QQSMLNIVMQLRKVCNHPYLIP-GTEPDSGSVEFLHEMRIKASAKLTLL 1076
                GK  A  + +M NI+MQLRK   HPYL+    EP + S    HE  I ASAKL LL
Sbjct: 1144 ASLGGKSNARTKTNMNNILMQLRKCLQHPYLVSEDLEPRNLSPIEAHEKLIDASAKLRLL 1203

Query: 1077 HSMLKVLYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVGDRQAAITRFN 1136
              +L  L   GHRVL+FSQ    LDI+ED+L  E G K + R+DG+    DRQ  +  FN
Sbjct: 1204 KMLLPKLKARGHRVLLFSQFVMALDIIEDFLQGE-GYK-FLRLDGNQKQADRQKGMDEFN 1261

Query: 1137 QDKSR-FVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYR 1195
            +  S  F+++LSTR+ G+GINL TADTVII+D DFNPH D+QA+ R+HR GQ K  LV++
Sbjct: 1262 KPGSDIFIYMLSTRAGGVGINLFTADTVIIFDPDFNPHQDLQAIARSHRYGQQKTCLVFK 1321

Query: 1196 LVVRASVEERILQLAKKKLMLDQLFVNKSGSQK----EVEDILRWGTEELFND 1244
            L+V+ S EERI+Q  KKKL+LD L V K   ++    +++ IL +G + +F +
Sbjct: 1322 LMVKQSAEERIMQNGKKKLVLDHLIVQKMDDEENGGDDMQSILTFGAKAIFEE 1374


>gi|327351572|gb|EGE80429.1| chromatin remodeling complex subunit [Ajellomyces dermatitidis ATCC
            18188]
          Length = 1542

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 283/826 (34%), Positives = 435/826 (52%), Gaps = 101/826 (12%)

Query: 610  VSYEFLVKWVGKSNIHNSWIPESQL---KVLAKRKLENYKAKYGTTVINICD---ERWKQ 663
            ++ E+L+KW  KS    SW+P   +      A RK  +  +K    +++  D   E + +
Sbjct: 522  IAKEYLIKWRKKSYFQTSWMPGPWVWAKAAPATRKAFSKSSKSLKPIMSKEDAIPEEFLR 581

Query: 664  PQRVISLRSSK---------DGTR-----EAFVKWTGLPYDECTWEKLDEPALEKYSHLT 709
               +  L  S          D  R     + +VK+ GLPY++  WE +  P   +  H  
Sbjct: 582  VDIIFDLEYSNVVSNSSLEIDMARVKEVSKIYVKYKGLPYEDAVWETIPSPKETERWHDY 641

Query: 710  DLFVQ------FER----QTLKKDASEDELPRGKGDCQQSEIVALTEQPEELKGGALFPH 759
             +  Q      + R      LKK+     L   +     +++V  T QP  L GG +  +
Sbjct: 642  QMAYQNWVAGKYVRVPKSHILKKN-----LATARSKDFATQLVKKT-QPPLLTGGQIMDY 695

Query: 760  QLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFISSLYCEFKAKLPCLVLVPLSTMPN 819
            Q + LNWL   W+K +N ILADEMGLGKT+   A +++L  + +   P LV+VP ST PN
Sbjct: 696  QKDGLNWLYYMWYKEQNAILADEMGLGKTIQVIALLATLVHDHRC-WPFLVVVPNSTCPN 754

Query: 820  WLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPDNLNKKTSSYKFNVLLTTYEMIL 879
            W  E  +WAP L VV Y+G + AR I   YE     PD     +S  + ++++T+YE ++
Sbjct: 755  WRREIKVWAPKLRVVTYYGSSAARKIAHDYEMF---PDG----SSDLRCHIVVTSYESMI 807

Query: 880  ADSSH--LRGVPWEVLVVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYN 937
             +++      +PW  LVVDEG RLKN  + L+  L   +F  ++LLTGTPLQNNI E++N
Sbjct: 808  DETARRLFSNIPWAGLVVDEGQRLKNDKNLLYEALTRINFPFKILLTGTPLQNNIRELFN 867

Query: 938  LLNFLQPASFPSLSSFEEKFNDLTTTQKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 997
            ++ F  P+   +  + E+++    T + + EL  ++ P+ LRR K   +  +PP  + ++
Sbjct: 868  IIQFCDPSK--NAEALEQQYGGDFTKETLTELHDMIRPYFLRRTKAQVLTFLPPMAQIIL 925

Query: 998  PVELSSIQAEYYRAMLTKNYQILRNIGKGVA--------QQSMLNIVMQLRKVCNHPYLI 1049
            PV +S +Q + Y+++L KN Q++++I K             ++ NI+MQLRK   HP++ 
Sbjct: 926  PVTMSVVQKKLYKSILAKNPQLIQSIFKKTPGGTLKRTEHHNLNNILMQLRKCLCHPFVY 985

Query: 1050 P-GTEPDSGSVEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMTKLLDILEDYLN 1108
                E  + S    H   ++AS+KL LL  +L  L + GHRVLIFSQ    LD++ED+L+
Sbjct: 986  SKAIEERAISAALSHRNLVEASSKLQLLEMLLPKLQERGHRVLIFSQFLDNLDVVEDFLD 1045

Query: 1109 IEFGPKTYERVDGSVSVGDRQAAITRFNQ-DKSRFVFLLSTRSCGLGINLATADTVIIYD 1167
               G   + R+DGS+S   +Q  I  FN  D   F FLLSTRS G+GINLATADTVII D
Sbjct: 1046 -GLG-LLHRRLDGSMSSLQKQKQIDDFNAPDSPYFAFLLSTRSGGVGINLATADTVIIMD 1103

Query: 1168 SDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN----K 1223
             DFNPH DIQA++RAHRIGQ K++LV++LV + S EE+I+Q+ KKK+ LDQ+ +     +
Sbjct: 1104 PDFNPHQDIQALSRAHRIGQRKKVLVFQLVTKGSAEEKIMQIGKKKMALDQVLIEHMDAE 1163

Query: 1224 SGSQKEVEDILRWGTEELFNDSPGINGKDMGENNTSIEEAVRDLEQKHRKRGGGLG---- 1279
              ++ ++E ILR G + LF+D+      D+  +N SIE+ + D  Q    + G  G    
Sbjct: 1164 DDTEVDLEAILRHGADALFDDA---TTDDIHYDNESIEKLL-DRSQIENTKAGDDGSAES 1219

Query: 1280 ----------DVYQDKCTEGSTK----IVWDE-------------NAIARLLDRSNLQSG 1312
                      D   DK  +  T      VW++              A A+ L R   +  
Sbjct: 1220 QFSFARVWVNDTLSDKLGDSETATPNDTVWNKILQERERIAAEEAKANAQALGRGKRKRQ 1279

Query: 1313 STDLA--EGDLENDMLGSVKATEWNEETTEDQAESPVAAVDDASAE 1356
            + D A     +E  +L S KA+  ++   E Q+  P +  +DA  +
Sbjct: 1280 TVDYAFQYRGVEGHLLSSPKASGKDDTDAEFQSFGPESDPEDADTD 1325


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.313    0.130    0.373 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,497,482,340
Number of Sequences: 23463169
Number of extensions: 922708450
Number of successful extensions: 2371510
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17223
Number of HSP's successfully gapped in prelim test: 5393
Number of HSP's that attempted gapping in prelim test: 2256050
Number of HSP's gapped (non-prelim): 59789
length of query: 1404
length of database: 8,064,228,071
effective HSP length: 156
effective length of query: 1248
effective length of database: 8,698,941,003
effective search space: 10856278371744
effective search space used: 10856278371744
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 84 (37.0 bits)