BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042871
(588 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 162/292 (55%), Gaps = 26/292 (8%)
Query: 301 RYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGN--VETFVREVA 358
R + ++ AT + LIG G+ GKVYKG L + VA+K T E + +E F E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 359 SSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKD---KCLSWIQRLEIAID 415
+ S RHP+LV+L+G+C +E LIY+ NGNL L+G D +SW QRLEI I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 416 SARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKV-IDIGETYASSEVRGT 474
+ARGL +LH+ + I+HRD+K NILL NF K++DFG+SK ++G+T+ V+GT
Sbjct: 148 AARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 475 FGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGKKAKV--LTRA--------------GS 518
GY+DPEY ++ DVYSFG+VL ++L + A V L R G
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 519 ALELADPKLDREYSIEAFDLTLQLALSCTALTHQ-RPPMEQVFVTLQKALDI 569
++ DP L + E+ A+ C AL+ + RP M V L+ AL +
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 161/292 (55%), Gaps = 26/292 (8%)
Query: 301 RYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGN--VETFVREVA 358
R + ++ AT + LIG G+ GKVYKG L + VA+K T E + +E F E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 359 SSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKD---KCLSWIQRLEIAID 415
+ S RHP+LV+L+G+C +E LIY+ NGNL L+G D +SW QRLEI I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 416 SARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKV-IDIGETYASSEVRGT 474
+ARGL +LH+ + I+HRD+K NILL NF K++DFG+SK ++ +T+ V+GT
Sbjct: 148 AARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 475 FGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGKKAKV--LTRA--------------GS 518
GY+DPEY ++ DVYSFG+VL ++L + A V L R G
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 519 ALELADPKLDREYSIEAFDLTLQLALSCTALTHQ-RPPMEQVFVTLQKALDI 569
++ DP L + E+ A+ C AL+ + RP M V L+ AL +
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 158/289 (54%), Gaps = 25/289 (8%)
Query: 301 RYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNE---GNVETFVREV 357
R+++RE+ A++ + N++G G GKVYKG+L++ VA+K + E G F EV
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEV 86
Query: 358 ASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKC---LSWIQRLEIAI 414
S H NL+ L G+C+ E L+Y NG++A L + + L W +R IA+
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 146
Query: 415 DSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT 474
SARGL +LH + + I+HRD+K NILL FEA + DFGL+K++D + + VRGT
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGT 206
Query: 475 FGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGKKAKVLTRAGS---------------- 518
G++ PEY S K + DV+ +G++LL++++G++A L R +
Sbjct: 207 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 266
Query: 519 -ALE-LADPKLDREYSIEAFDLTLQLALSCTALT-HQRPPMEQVFVTLQ 564
LE L D L Y E + +Q+AL CT + +RP M +V L+
Sbjct: 267 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 156/289 (53%), Gaps = 25/289 (8%)
Query: 301 RYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNE---GNVETFVREV 357
R+++RE+ A++ N++G G GKVYKG+L++ VA+K + E G F EV
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 358 ASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKC---LSWIQRLEIAI 414
S H NL+ L G+C+ E L+Y NG++A L + + L W +R IA+
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 415 DSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT 474
SARGL +LH + + I+HRD+K NILL FEA + DFGL+K++D + + VRG
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGX 198
Query: 475 FGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGKKAKVLTRAGS---------------- 518
G++ PEY S K + DV+ +G++LL++++G++A L R +
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258
Query: 519 -ALE-LADPKLDREYSIEAFDLTLQLALSCTALT-HQRPPMEQVFVTLQ 564
LE L D L Y E + +Q+AL CT + +RP M +V L+
Sbjct: 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 125/236 (52%), Gaps = 20/236 (8%)
Query: 290 KGVQLKDPGCPRYTIREVHYATEKLNEL------NLIGEGITGKVYKGKLSNNQHVAIKH 343
K +++ D ++ E+ T +E N +GEG G VYKG + NN VA+K
Sbjct: 3 KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKK 61
Query: 344 ------ITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWL 397
IT E + F +E+ + +H NLV LLG+ D+ L+Y PNG+L + L
Sbjct: 62 LAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121
Query: 398 FGKDKC--LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFG 455
D LSW R +IA +A G+ FLH E +HRDIK NILL F AK+SDFG
Sbjct: 122 SCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFG 178
Query: 456 LSKVID-IGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGKKA 510
L++ + +T S + GT Y+ PE ++ D+YSFG+VLL+I++G A
Sbjct: 179 LARASEKFAQTVMXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPA 233
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 124/236 (52%), Gaps = 20/236 (8%)
Query: 290 KGVQLKDPGCPRYTIREVHYATEKLNEL------NLIGEGITGKVYKGKLSNNQHVAIKH 343
K +++ D ++ E+ T +E N +GEG G VYKG + NN VA+K
Sbjct: 3 KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKK 61
Query: 344 ------ITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWL 397
IT E + F +E+ + +H NLV LLG+ D+ L+Y PNG+L + L
Sbjct: 62 LAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121
Query: 398 FGKDKC--LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFG 455
D LSW R +IA +A G+ FLH E +HRDIK NILL F AK+SDFG
Sbjct: 122 SCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFG 178
Query: 456 LSKVID-IGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGKKA 510
L++ + +T + GT Y+ PE ++ D+YSFG+VLL+I++G A
Sbjct: 179 LARASEKFAQTVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPA 233
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 111/202 (54%), Gaps = 14/202 (6%)
Query: 318 NLIGEGITGKVYKGKLSNNQHVAIKH------ITNEGNVETFVREVASSSHVRHPNLVAL 371
N +GEG G VYKG + NN VA+K IT E + F +E+ + +H NLV L
Sbjct: 31 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKC--LSWIQRLEIAIDSARGLWFLHSYSEG 429
LG+ D+ L+Y PNG+L + L D LSW R +IA +A G+ FLH E
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---EN 146
Query: 430 CIVHRDIKPTNILLGPNFEAKLSDFGLSKVID-IGETYASSEVRGTFGYLDPEYRSNCKV 488
+HRDIK NILL F AK+SDFGL++ + + + GT Y+ PE ++
Sbjct: 147 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG-EI 205
Query: 489 NSSGDVYSFGIVLLQILSGKKA 510
D+YSFG+VLL+I++G A
Sbjct: 206 TPKSDIYSFGVVLLEIITGLPA 227
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 14/202 (6%)
Query: 318 NLIGEGITGKVYKGKLSNNQHVAIKH------ITNEGNVETFVREVASSSHVRHPNLVAL 371
N GEG G VYKG + NN VA+K IT E + F +E+ + +H NLV L
Sbjct: 28 NKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKC--LSWIQRLEIAIDSARGLWFLHSYSEG 429
LG+ D+ L+Y PNG+L + L D LSW R +IA +A G+ FLH E
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLH---EN 143
Query: 430 CIVHRDIKPTNILLGPNFEAKLSDFGLSKVID-IGETYASSEVRGTFGYLDPEYRSNCKV 488
+HRDIK NILL F AK+SDFGL++ + + S + GT Y PE ++
Sbjct: 144 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG-EI 202
Query: 489 NSSGDVYSFGIVLLQILSGKKA 510
D+YSFG+VLL+I++G A
Sbjct: 203 TPKSDIYSFGVVLLEIITGLPA 224
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 6/203 (2%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLVALLGYCLR 377
IG G G V+ G N VAIK I EG + E F+ E + HP LV L G CL
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
L++E +G L+++L + + L + +D G+ +L E C++HRD+
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 128
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
N L+G N K+SDFG+++ + + +S+ + + PE S + +S DV+SF
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 188
Query: 498 GIVLLQILSGKKAKVLTRAGSAL 520
G+++ ++ S K R+ S +
Sbjct: 189 GVLMWEVFSEGKIPYENRSNSEV 211
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 6/210 (2%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLVA 370
+L + IG G G V+ G N VAIK I EG + E F+ E + HP LV
Sbjct: 8 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
L G CL L++E +G L+++L + + L + +D G+ +L E C
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EAC 123
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNS 490
++HRD+ N L+G N K+SDFG+++ + + +S+ + + PE S + +S
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 491 SGDVYSFGIVLLQILSGKKAKVLTRAGSAL 520
DV+SFG+++ ++ S K R+ S +
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSNSEV 213
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 7/223 (3%)
Query: 300 PRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREV 357
PR ++ V +E L + IG G G V+ G N VAIK I EG++ + F+ E
Sbjct: 16 PRGSLHMVIDPSE-LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEA 73
Query: 358 ASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSA 417
+ HP LV L G CL L++E +G L+++L + + L + +D
Sbjct: 74 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC 133
Query: 418 RGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGY 477
G+ +L E C++HRD+ N L+G N K+SDFG+++ + + +S+ + +
Sbjct: 134 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 190
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILSGKKAKVLTRAGSAL 520
PE S + +S DV+SFG+++ ++ S K R+ S +
Sbjct: 191 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 233
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 6/210 (2%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLVA 370
+L + IG G G V+ G N VAIK I EG + E F+ E + HP LV
Sbjct: 11 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
L G CL L++E +G L+++L + + L + +D G+ +L E C
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EAC 126
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNS 490
++HRD+ N L+G N K+SDFG+++ + + +S+ + + PE S + +S
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 186
Query: 491 SGDVYSFGIVLLQILSGKKAKVLTRAGSAL 520
DV+SFG+++ ++ S K R+ S +
Sbjct: 187 KSDVWSFGVLMWEVFSEGKIPYENRSNSEV 216
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 6/210 (2%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLVA 370
+L + IG G G V+ G N VAIK I EG + E F+ E + HP LV
Sbjct: 9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
L G CL L+ E +G L+++L + + L + +D G+ +L E C
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EAC 124
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNS 490
++HRD+ N L+G N K+SDFG+++ + + +S+ + + PE S + +S
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 491 SGDVYSFGIVLLQILSGKKAKVLTRAGSAL 520
DV+SFG+++ ++ S K R+ S +
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIPYENRSNSEV 214
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 6/210 (2%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLVA 370
+L + IG G G V+ G N VAIK I EG + E F+ E + HP LV
Sbjct: 8 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
L G CL L++E +G L+++L + + L + +D G+ +L E
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EAS 123
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNS 490
++HRD+ N L+G N K+SDFG+++ + + +S+ + + PE S + +S
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 491 SGDVYSFGIVLLQILSGKKAKVLTRAGSAL 520
DV+SFG+++ ++ S K R+ S +
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSNSEV 213
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 314 LNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEG----NVETFVREVASSSHVRHPNLV 369
LN IG G G V++ + + VA+K + + V F+REVA +RHPN+V
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSD-VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLF--GKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+G + ++ E G+L L G + L +RL +A D A+G+ +LH+ +
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCK 487
IVHRD+K N+L+ + K+ DFGLS+ + S GT ++ PE +
Sbjct: 158 P-PIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 488 VNSSGDVYSFGIVLLQI 504
N DVYSFG++L ++
Sbjct: 216 SNEKSDVYSFGVILWEL 232
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 8/257 (3%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLV 369
E++ L +G G G V GK VA+K I EG++ + F +E + + HP LV
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLV 66
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEG 429
G C + +++ E NG L +L K L Q LE+ D G+ FL S+
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ-- 124
Query: 430 CIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVN 489
+HRD+ N L+ + K+SDFG+++ + + +S + + PE K +
Sbjct: 125 -FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYS 183
Query: 490 SSGDVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSIE-AFDLTLQLALSC-T 547
S DV++FGI++ ++ S K S + L + R Y A D Q+ SC
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWH 243
Query: 548 ALTHQRPPMEQVFVTLQ 564
L +RP +Q+ +++
Sbjct: 244 ELPEKRPTFQQLLSSIE 260
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 11/198 (5%)
Query: 314 LNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEG----NVETFVREVASSSHVRHPNLV 369
LN IG G G V++ + + VA+K + + V F+REVA +RHPN+V
Sbjct: 39 LNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLF--GKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+G + ++ E G+L L G + L +RL +A D A+G+ +LH+ +
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE-VRGTFGYLDPEYRSNC 486
IVHR++K N+L+ + K+ DFGLS++ T+ SS+ GT ++ PE +
Sbjct: 158 P-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 487 KVNSSGDVYSFGIVLLQI 504
N DVYSFG++L ++
Sbjct: 215 PSNEKSDVYSFGVILWEL 232
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 111/213 (52%), Gaps = 10/213 (4%)
Query: 296 DPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETF 353
DP P Y E+ + + +G G G+VY+G + VA+K + + VE F
Sbjct: 4 DPSSPNYDKWEMERTDITMK--HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 354 VREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEI 412
++E A ++HPNLV LLG C R ++I E GNL ++L ++ +S + L +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 121
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEV 471
A + + +L + +HRD+ N L+G N K++DFGLS+++ G+TY A +
Sbjct: 122 ATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 177
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
+ + PE + K + DV++FG++L +I
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 127/285 (44%), Gaps = 19/285 (6%)
Query: 299 CPRYTIREVHYATEKLNELNL-----IGEGITGKVYKGKLS----NNQHVAIKHIT---N 346
PR + + VH ++L+ N+ +G G G+V G+L VAIK +
Sbjct: 15 VPRGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 74
Query: 347 EGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSW 406
E F+ E + HPN++ L G + ++ E NG+L +L D +
Sbjct: 75 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 134
Query: 407 IQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGE 464
IQ + + A G+ +L S+ VHRD+ NIL+ N K+SDFGLS+V+ D
Sbjct: 135 IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 191
Query: 465 TYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS-GKKAKVLTRAGSALELA 523
Y + + + PE + K S+ DV+S+GIVL +++S G++ ++
Sbjct: 192 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 251
Query: 524 DPKLDREYSIEAFDLTLQLALSC-TALTHQRPPMEQVFVTLQKAL 567
D ++ QL L C + RP EQ+ L K +
Sbjct: 252 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 296
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 288 SFKGVQLKDPGCPRYTIREV------HYATEKLNELNLIGEGITGKVYKG-KLSNNQHVA 340
S + VQL++P PR ++++ E + L +GEG G VYK Q VA
Sbjct: 1 SLETVQLRNP--PRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVA 58
Query: 341 IKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK 400
IK + E +++ ++E++ P++V G + + +++ E C G++++ + +
Sbjct: 59 IKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR 118
Query: 401 DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
+K L+ + I + +GL +LH + +HRDIK NILL AKL+DFG++ +
Sbjct: 119 NKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQL 175
Query: 461 DIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
+ V GT ++ PE N D++S GI +++ GK
Sbjct: 176 -TDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 17/229 (7%)
Query: 291 GVQLKDPGCPRYTIREVHYATEKLNELNL---IGEGITGKVYKGKLSNNQHVAIKHITNE 347
G Q K+ PR +Y + +E+ L IG G G VYKGK + V I + +
Sbjct: 12 GTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDP 71
Query: 348 G--NVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLS 405
+ F EVA RH N++ +GY + D ++ + C +L + L ++
Sbjct: 72 TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQ 130
Query: 406 WIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET 465
Q ++IA +A+G+ +LH+ + I+HRD+K NI L K+ DFGL+ V
Sbjct: 131 MFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATV--KSRW 185
Query: 466 YASSEVR---GTFGYLDPE---YRSNCKVNSSGDVYSFGIVLLQILSGK 508
S +V G+ ++ PE + N + DVYS+GIVL ++++G+
Sbjct: 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 111/213 (52%), Gaps = 10/213 (4%)
Query: 296 DPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETF 353
DP P Y E+ + + +G G G+VY+G + VA+K + + VE F
Sbjct: 4 DPSSPNYDKWEMERTDITMK--HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 354 VREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEI 412
++E A ++HPNLV LLG C R ++I E GNL ++L ++ ++ + L +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEV 471
A + + +L + +HRD+ N L+G N K++DFGLS+++ G+TY A +
Sbjct: 122 ATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 177
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
+ + PE + K + DV++FG++L +I
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 111/213 (52%), Gaps = 10/213 (4%)
Query: 296 DPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETF 353
DP P Y E+ + + +G G G+VY+G + VA+K + + VE F
Sbjct: 4 DPSSPNYDKWEMERTDITMK--HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 354 VREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEI 412
++E A ++HPNLV LLG C R ++I E GNL ++L ++ ++ + L +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEV 471
A + + +L + +HRD+ N L+G N K++DFGLS+++ G+TY A +
Sbjct: 122 ATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 177
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
+ + PE + K + DV++FG++L +I
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 111/213 (52%), Gaps = 10/213 (4%)
Query: 296 DPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETF 353
DP P Y E+ + + +G G G+VY+G + VA+K + + VE F
Sbjct: 4 DPSSPNYDKWEMERTDITMK--HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 354 VREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEI 412
++E A ++HPNLV LLG C R ++I E GNL ++L ++ ++ + L +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEV 471
A + + +L + +HRD+ N L+G N K++DFGLS+++ G+TY A +
Sbjct: 122 ATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGA 177
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
+ + PE + K + DV++FG++L +I
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 8/212 (3%)
Query: 296 DPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETF 353
DP P Y E+ + + +G G G+VY+G + VA+K + + VE F
Sbjct: 4 DPSSPNYDKWEMERTDITMK--HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 354 VREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEI 412
++E A ++HPNLV LLG C R ++I E GNL ++L ++ ++ + L +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
A + + +L + +HRD+ N L+G N K++DFGLS+++ A + +
Sbjct: 122 ATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAK 178
Query: 473 GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
+ PE + K + DV++FG++L +I
Sbjct: 179 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ +S + L +A + + +L + +HRD+
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+TY A + + + PE + K + DV+
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 197 AFGVLLWEI 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ +S + L +A + + +L + +HRD+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+TY A + + + PE + K + DV+
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 197 AFGVLLWEI 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ +S + L +A + + +L + +HRD+
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+TY A + + + PE + K + DV+
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 197 AFGVLLWEI 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ +S + L +A + + +L + +HRD+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+TY A + + + PE + K + DV+
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 197 AFGVLLWEI 205
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 16/219 (7%)
Query: 298 GCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ----HVAIKHITNE---GNV 350
G P+Y I A E + ++GEG G+VY+G +N++ +VA+K + N
Sbjct: 15 GSPQYGI-----AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK 69
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E F+ E ++ HP++V L+G + + ++I EL P G L +L L + +
Sbjct: 70 EKFMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLV 128
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
++ + + +L S + VHRDI NIL+ KL DFGLS+ I+ + Y +S
Sbjct: 129 LYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 185
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGKK 509
R ++ PE + + ++ DV+ F + + +ILS K
Sbjct: 186 TRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 224
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 111/230 (48%), Gaps = 18/230 (7%)
Query: 289 FKGVQLKDP--GCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-----HVAI 341
F+G DP ++T E+H + + +IG G G+VYKG L + VAI
Sbjct: 22 FQGAMGSDPNQAVLKFTT-EIHPSC--VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAI 78
Query: 342 KHIT---NEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLF 398
K + E F+ E H N++ L G + +I E NG L ++L
Sbjct: 79 KTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR 138
Query: 399 GKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSK 458
KD S +Q + + A G+ +L + + VHRD+ NIL+ N K+SDFGLS+
Sbjct: 139 EKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSR 195
Query: 459 VI--DIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
V+ D TY +S + + PE S K S+ DV+SFGIV+ ++++
Sbjct: 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 133/309 (43%), Gaps = 21/309 (6%)
Query: 275 KRYYKSNPPAKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNL-----IGEGITGKVY 329
KR + N K+ + DP + VH ++L+ N+ +G G G+V
Sbjct: 5 KRLHFGNGHLKLPGLR--TFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVC 62
Query: 330 KGKLS----NNQHVAIKHIT---NEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECF 382
G+L VAIK + E F+ E + HPN++ L G +
Sbjct: 63 SGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 383 LIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNIL 442
++ E NG+L +L D + IQ + + A G+ +L S+ VHRD+ NIL
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNIL 179
Query: 443 LGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIV 500
+ N K+SDFGLS+V+ D Y + + + PE + K S+ DV+S+GIV
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 501 LLQILS-GKKAKVLTRAGSALELADPKLDREYSIEAFDLTLQLALSC-TALTHQRPPMEQ 558
L +++S G++ ++ D ++ QL L C + RP EQ
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 559 VFVTLQKAL 567
+ L K +
Sbjct: 300 IVSILDKLI 308
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ ++ + L +A + + +L + +HRD+
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 138
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+TY A + + + PE + K + DV+
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 197
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 198 AFGVLLWEI 206
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 114/223 (51%), Gaps = 34/223 (15%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIK---HITNEG---NVETFVREVAS 359
E+ +A L E+ IG G GKVY+ ++ VA+K H +E +E +E
Sbjct: 3 EIDFAELTLEEI--IGIGGFGKVYRAFWIGDE-VAVKAARHDPDEDISQTIENVRQEAKL 59
Query: 360 SSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK----DKCLSWIQRLEIAID 415
+ ++HPN++AL G CL+ L+ E G L L GK D ++W A+
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQ 113
Query: 416 SARGLWFLHSYSEGCIVHRDIKPTNILLGPNFE--------AKLSDFGLSKVIDIGETYA 467
ARG+ +LH + I+HRD+K +NIL+ E K++DFGL++ E +
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHR 168
Query: 468 SSEVR--GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
++++ G + ++ PE + DV+S+G++L ++L+G+
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 130/303 (42%), Gaps = 27/303 (8%)
Query: 289 FKGVQLKDPGCPRYT--------IREVHYATEKLNELNL-----IGEGITGKVYKGKLS- 334
F LK PG Y + VH ++L+ N+ +G G G+V G+L
Sbjct: 9 FGNGHLKLPGLRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKL 68
Query: 335 ---NNQHVAIKHIT---NEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELC 388
VAIK + E F+ E + HPN++ L G + ++ E
Sbjct: 69 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 389 PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFE 448
NG+L +L D + IQ + + A G+ +L S+ VHRD+ NIL+ N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLV 185
Query: 449 AKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
K+SDFGLS+V+ D Y + + + PE + K S+ DV+S+GIVL +++S
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 507 -GKKAKVLTRAGSALELADPKLDREYSIEAFDLTLQLALSC-TALTHQRPPMEQVFVTLQ 564
G++ ++ D ++ QL L C + RP EQ+ L
Sbjct: 246 YGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 565 KAL 567
K +
Sbjct: 306 KLI 308
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ ++ + L +A + + +L + +HRD+
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 139
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+TY A + + + PE + K + DV+
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 199 AFGVLLWEI 207
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 130/303 (42%), Gaps = 27/303 (8%)
Query: 289 FKGVQLKDPGCPRYT--------IREVHYATEKLNELNL-----IGEGITGKVYKGKLS- 334
F LK PG Y + VH ++L+ N+ +G G G+V G+L
Sbjct: 7 FGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKL 66
Query: 335 ---NNQHVAIKHIT---NEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELC 388
VAIK + E F+ E + HPN++ L G + ++ E
Sbjct: 67 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 126
Query: 389 PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFE 448
NG+L +L D + IQ + + A G+ +L S+ VHRD+ NIL+ N
Sbjct: 127 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLV 183
Query: 449 AKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
K+SDFGLS+V+ D Y + + + PE + K S+ DV+S+GIVL +++S
Sbjct: 184 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
Query: 507 -GKKAKVLTRAGSALELADPKLDREYSIEAFDLTLQLALSC-TALTHQRPPMEQVFVTLQ 564
G++ ++ D ++ QL L C + RP EQ+ L
Sbjct: 244 YGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 303
Query: 565 KAL 567
K +
Sbjct: 304 KLI 306
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ ++ + L +A + + +L + +HRD+
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 141
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+TY A + + + PE + K + DV+
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 200
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 201 AFGVLLWEI 209
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 130/303 (42%), Gaps = 27/303 (8%)
Query: 289 FKGVQLKDPGCPRYT--------IREVHYATEKLNELNL-----IGEGITGKVYKGKLS- 334
F LK PG Y + VH ++L+ N+ +G G G+V G+L
Sbjct: 9 FGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKL 68
Query: 335 ---NNQHVAIKHIT---NEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELC 388
VAIK + E F+ E + HPN++ L G + ++ E
Sbjct: 69 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXM 128
Query: 389 PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFE 448
NG+L +L D + IQ + + A G+ +L S+ VHRD+ NIL+ N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLV 185
Query: 449 AKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
K+SDFGLS+V+ D Y + + + PE + K S+ DV+S+GIVL +++S
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 507 -GKKAKVLTRAGSALELADPKLDREYSIEAFDLTLQLALSC-TALTHQRPPMEQVFVTLQ 564
G++ ++ D ++ QL L C + RP EQ+ L
Sbjct: 246 YGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 565 KAL 567
K +
Sbjct: 306 KLI 308
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 130/303 (42%), Gaps = 27/303 (8%)
Query: 289 FKGVQLKDPGCPRYT--------IREVHYATEKLNELNL-----IGEGITGKVYKGKLS- 334
F LK PG Y + VH ++L+ N+ +G G G+V G+L
Sbjct: 9 FGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKL 68
Query: 335 ---NNQHVAIKHIT---NEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELC 388
VAIK + E F+ E + HPN++ L G + ++ E
Sbjct: 69 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 389 PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFE 448
NG+L +L D + IQ + + A G+ +L S+ VHRD+ NIL+ N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLV 185
Query: 449 AKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
K+SDFGLS+V+ D Y + + + PE + K S+ DV+S+GIVL +++S
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 507 -GKKAKVLTRAGSALELADPKLDREYSIEAFDLTLQLALSC-TALTHQRPPMEQVFVTLQ 564
G++ ++ D ++ QL L C + RP EQ+ L
Sbjct: 246 YGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
Query: 565 KAL 567
K +
Sbjct: 306 KLI 308
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ ++ + L +A + + +L + +HRD+
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 150
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+TY A + + + PE + K + DV+
Sbjct: 151 AARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 209
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 210 AFGVLLWEI 218
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ ++ + L +A + + +L + +HRD+
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 139
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+TY A + + + PE + K + DV+
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 199 AFGVLLWEI 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ +S + L +A + + +L + +HRD+
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 135
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+T+ A + + + PE + K + DV+
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 195 AFGVLLWEI 203
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 16/219 (7%)
Query: 298 GCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ----HVAIKHITNE---GNV 350
G P+Y I A E + ++GEG G+VY+G +N++ +VA+K + N
Sbjct: 3 GGPQYGI-----AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK 57
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E F+ E ++ HP++V L+G + + ++I EL P G L +L L + +
Sbjct: 58 EKFMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLV 116
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
++ + + +L S + VHRDI NIL+ KL DFGLS+ I+ + Y +S
Sbjct: 117 LYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 173
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGKK 509
R ++ PE + + ++ DV+ F + + +ILS K
Sbjct: 174 TRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ ++ + L +A + + +L + +HRD+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+TY A + + + PE + K + DV+
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 197 AFGVLLWEI 205
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 133/309 (43%), Gaps = 21/309 (6%)
Query: 275 KRYYKSNPPAKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNL-----IGEGITGKVY 329
KR + N K+ + DP + VH ++L+ N+ +G G G+V
Sbjct: 5 KRLHFGNGHLKLPGLR--TFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVC 62
Query: 330 KGKLS----NNQHVAIKHIT---NEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECF 382
G+L VAIK + E F+ E + HPN++ L G +
Sbjct: 63 SGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 383 LIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNIL 442
++ E NG+L +L D + IQ + + A G+ +L S+ VHRD+ NIL
Sbjct: 123 IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNIL 179
Query: 443 LGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIV 500
+ N K+SDFGLS+V+ D Y + + + PE + K S+ DV+S+GIV
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 501 LLQILS-GKKAKVLTRAGSALELADPKLDREYSIEAFDLTLQLALSC-TALTHQRPPMEQ 558
L +++S G++ ++ D ++ QL L C + RP EQ
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 559 VFVTLQKAL 567
+ L K +
Sbjct: 300 IVSILDKLI 308
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 133/309 (43%), Gaps = 21/309 (6%)
Query: 275 KRYYKSNPPAKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNL-----IGEGITGKVY 329
KR + N K+ + DP + VH ++L+ N+ +G G G+V
Sbjct: 5 KRLHFGNGHLKLPGLR--TFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVC 62
Query: 330 KGKLS----NNQHVAIKHIT---NEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECF 382
G+L VAIK + E F+ E + HPN++ L G +
Sbjct: 63 SGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 383 LIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNIL 442
++ E NG+L +L D + IQ + + A G+ +L S+ VHRD+ NIL
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL 179
Query: 443 LGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIV 500
+ N K+SDFGLS+V+ D Y + + + PE + K S+ DV+S+GIV
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 501 LLQILS-GKKAKVLTRAGSALELADPKLDREYSIEAFDLTLQLALSC-TALTHQRPPMEQ 558
L +++S G++ ++ D ++ QL L C + RP EQ
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 559 VFVTLQKAL 567
+ L K +
Sbjct: 300 IVSILDKLI 308
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 13/234 (5%)
Query: 318 NLIGEGITGKVYKGK-LSNNQHVAIKHITNE-----GNVETFVREVASSSHVRHPNLVAL 371
NL+G+G VY+ + + VAIK I + G V+ EV ++HP+++ L
Sbjct: 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
Y + +L+ E+C NG + +L + K S + G+ +LHS+ I
Sbjct: 77 YNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG---I 133
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSS 491
+HRD+ +N+LL N K++DFGL+ + + + + GT Y+ PE +
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRSAHGLE 192
Query: 492 GDVYSFGIVLLQILSGK---KAKVLTRAGSALELADPKLDREYSIEAFDLTLQL 542
DV+S G + +L G+ + + + LAD ++ SIEA DL QL
Sbjct: 193 SDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQL 246
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 99/188 (52%), Gaps = 6/188 (3%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ +S + L +A + + +L + +HRD+
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 135
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYS 496
N L+G N K++DFGLS+++ A + + + PE + K + DV++
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 497 FGIVLLQI 504
FG++L +I
Sbjct: 196 FGVLLWEI 203
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + + L F + + ++I L A L + HS
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 133
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMIE 184
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 133/309 (43%), Gaps = 21/309 (6%)
Query: 275 KRYYKSNPPAKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNL-----IGEGITGKVY 329
KR + N K+ + DP + VH ++L+ N+ +G G G+V
Sbjct: 5 KRLHFGNGHLKLPGLR--TFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVC 62
Query: 330 KGKLS----NNQHVAIKHIT---NEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECF 382
G+L VAIK + E F+ E + HPN++ L G +
Sbjct: 63 SGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 383 LIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNIL 442
++ E NG+L +L D + IQ + + A G+ +L S+ VHRD+ NIL
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL 179
Query: 443 LGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIV 500
+ N K+SDFGLS+V+ D Y + + + PE + K S+ DV+S+GIV
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 501 LLQILS-GKKAKVLTRAGSALELADPKLDREYSIEAFDLTLQLALSC-TALTHQRPPMEQ 558
L +++S G++ ++ D ++ QL L C + RP EQ
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 559 VFVTLQKAL 567
+ L K +
Sbjct: 300 IVSILDKLI 308
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ ++ + L +A + + +L + +HRD+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 137
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+TY A + + + PE + K + DV+
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 197 AFGVLLWEI 205
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ ++ + L +A + + +L + +HRD+
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 139
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+TY A + + + PE + K + DV+
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 199 AFGVLLWEI 207
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + + L F + + ++I L A L + HS
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 133
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLXGTLDYLPPEMIE 184
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 99/188 (52%), Gaps = 6/188 (3%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ +S + L +A + + +L + +HRD+
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDL 135
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYS 496
N L+G N K++DFGLS+++ A + + + PE + K + DV++
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 497 FGIVLLQI 504
FG++L +I
Sbjct: 196 FGVLLWEI 203
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 95/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + N++ + A+K + G REV SH+RHPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKK- 128
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDYLPPEMIE 179
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 19/281 (6%)
Query: 303 TIREVHYATEKLNELNL-----IGEGITGKVYKGKLS----NNQHVAIKHIT---NEGNV 350
+ + VH ++L+ N+ +G G G+V G+L VAIK + E
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
F+ E + HPN++ L G + ++ E NG+L +L D + IQ +
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 121
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYAS 468
+ A G+ +L S+ VHRD+ NIL+ N K+SDFGLS+V+ D Y +
Sbjct: 122 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 469 SEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS-GKKAKVLTRAGSALELADPKL 527
+ + PE + K S+ DV+S+GIVL +++S G++ ++ D
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 238
Query: 528 DREYSIEAFDLTLQLALSC-TALTHQRPPMEQVFVTLQKAL 567
++ QL L C + RP EQ+ L K +
Sbjct: 239 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 19/281 (6%)
Query: 303 TIREVHYATEKLNELNL-----IGEGITGKVYKGKLS----NNQHVAIKHIT---NEGNV 350
+ + VH ++L+ N+ +G G G+V G+L VAIK + E
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
F+ E + HPN++ L G + ++ E NG+L +L D + IQ +
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 121
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYAS 468
+ A G+ +L S+ VHRD+ NIL+ N K+SDFGLS+V+ D Y +
Sbjct: 122 GMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 469 SEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS-GKKAKVLTRAGSALELADPKL 527
+ + PE + K S+ DV+S+GIVL +++S G++ ++ D
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 238
Query: 528 DREYSIEAFDLTLQLALSC-TALTHQRPPMEQVFVTLQKAL 567
++ QL L C + RP EQ+ L K +
Sbjct: 239 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHIT--NEGNVETFVREVASSSHVRHPNLVALLGYCLR 377
IG G G VYKGK + V + ++T ++ F EV RH N++ +GY +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++ + C +L L + + ++IA +ARG+ +LH+ S I+HRD+K
Sbjct: 80 -PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLK 135
Query: 438 PTNILLGPNFEAKLSDFGLSKVID-IGETYASSEVRGTFGYLDPE---YRSNCKVNSSGD 493
NI L + K+ DFGL+ V ++ ++ G+ ++ PE + + + D
Sbjct: 136 SNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 195
Query: 494 VYSFGIVLLQILSGK 508
VY+FGIVL ++++G+
Sbjct: 196 VYAFGIVLYELMTGQ 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHIT--NEGNVETFVREVASSSHVRHPNLVALLGYCLR 377
IG G G VYKGK + V + ++T ++ F EV RH N++ +GY +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++ + C +L L + I+ ++IA +A+G+ +LH+ S I+HRD+K
Sbjct: 76 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 131
Query: 438 PTNILLGPNFEAKLSDFGLSKVID-IGETYASSEVRGTFGYLDPE---YRSNCKVNSSGD 493
NI L + K+ DFGL+ V ++ ++ G+ ++ PE + + D
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 494 VYSFGIVLLQILSGK 508
VY+FGIVL ++++G+
Sbjct: 192 VYAFGIVLYELMTGQ 206
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 133/309 (43%), Gaps = 21/309 (6%)
Query: 275 KRYYKSNPPAKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNL-----IGEGITGKVY 329
KR + N K+ + DP + VH ++L+ N+ +G G G+V
Sbjct: 5 KRLHFGNGHLKLPGLR--TFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVC 62
Query: 330 KGKLS----NNQHVAIKHIT---NEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECF 382
G+L VAIK + E F+ E + HPN++ L G +
Sbjct: 63 SGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 383 LIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNIL 442
++ E NG+L +L D + IQ + + A G+ +L S+ VHRD+ NIL
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL 179
Query: 443 LGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIV 500
+ N K+SDFGL++V+ D Y + + + PE + K S+ DV+S+GIV
Sbjct: 180 INSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 501 LLQILS-GKKAKVLTRAGSALELADPKLDREYSIEAFDLTLQLALSC-TALTHQRPPMEQ 558
L +++S G++ ++ D ++ QL L C + RP EQ
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 559 VFVTLQKAL 567
+ L K +
Sbjct: 300 IVSILDKLI 308
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHIT--NEGNVETFVREVASSSHVRHPNLVALLGYCLR 377
IG G G VYKGK + V + ++T ++ F EV RH N++ +GY +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++ + C +L L + I+ ++IA +A+G+ +LH+ S I+HRD+K
Sbjct: 81 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 136
Query: 438 PTNILLGPNFEAKLSDFGLSKVID-IGETYASSEVRGTFGYLDPE---YRSNCKVNSSGD 493
NI L + K+ DFGL+ V ++ ++ G+ ++ PE + + D
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 494 VYSFGIVLLQILSGK 508
VY+FGIVL ++++G+
Sbjct: 197 VYAFGIVLYELMTGQ 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHIT--NEGNVETFVREVASSSHVRHPNLVALLGYCLR 377
IG G G VYKGK + V + ++T ++ F EV RH N++ +GY +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++ + C +L L + I+ ++IA +A+G+ +LH+ S I+HRD+K
Sbjct: 81 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 136
Query: 438 PTNILLGPNFEAKLSDFGLSKVID-IGETYASSEVRGTFGYLDPE---YRSNCKVNSSGD 493
NI L + K+ DFGL+ V ++ ++ G+ ++ PE + + D
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 494 VYSFGIVLLQILSGK 508
VY+FGIVL ++++G+
Sbjct: 197 VYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHIT--NEGNVETFVREVASSSHVRHPNLVALLGYCLR 377
IG G G VYKGK + V + ++T ++ F EV RH N++ +GY +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++ + C +L L + I+ ++IA +A+G+ +LH+ S I+HRD+K
Sbjct: 78 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 133
Query: 438 PTNILLGPNFEAKLSDFGLSKVID-IGETYASSEVRGTFGYLDPE---YRSNCKVNSSGD 493
NI L + K+ DFGL+ V ++ ++ G+ ++ PE + + D
Sbjct: 134 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 193
Query: 494 VYSFGIVLLQILSGK 508
VY+FGIVL ++++G+
Sbjct: 194 VYAFGIVLYELMTGQ 208
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 300 PRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ----HVAIKHITNE---GNVET 352
P+Y I A E + ++GEG G+VY+G +N++ +VA+K + N E
Sbjct: 1 PQYGI-----AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK 55
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI 412
F+ E ++ HP++V L+G + + ++I EL P G L +L L + +
Sbjct: 56 FMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY 114
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
++ + + +L S + VHRDI NIL+ KL DFGLS+ I+ + Y +S R
Sbjct: 115 SLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTR 171
Query: 473 GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGKK 509
++ PE + + ++ DV+ F + + +ILS K
Sbjct: 172 LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 208
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 10/194 (5%)
Query: 319 LIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
++G G G V K K + VAIK I +E + F+ E+ S V HPN+V L G CL
Sbjct: 16 VVGRGAFGVVCKAKW-RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-- 72
Query: 379 DECFLIYELCPNGNLAEWLFGKDKCLSWI--QRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
+ L+ E G+L L G + + + + ++G+ +LHS ++HRD+
Sbjct: 73 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDL 132
Query: 437 KPTNILL-GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
KP N+LL K+ DFG + DI +T+ ++ +G+ ++ PE + DV+
Sbjct: 133 KPPNLLLVAGGTVLKICDFGTA--CDI-QTHMTNN-KGSAAWMAPEVFEGSNYSEKCDVF 188
Query: 496 SFGIVLLQILSGKK 509
S+GI+L ++++ +K
Sbjct: 189 SWGIILWEVITRRK 202
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHIT--NEGNVETFVREVASSSHVRHPNLVALLGYCLR 377
IG G G VYKGK + V + ++T ++ F EV RH N++ +GY +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++ + C +L L + I+ ++IA +A+G+ +LH+ S I+HRD+K
Sbjct: 103 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 158
Query: 438 PTNILLGPNFEAKLSDFGLSKVID-IGETYASSEVRGTFGYLDPEYRSNCKVNS---SGD 493
NI L + K+ DFGL+ V ++ ++ G+ ++ PE N D
Sbjct: 159 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 218
Query: 494 VYSFGIVLLQILSGK 508
VY+FGIVL ++++G+
Sbjct: 219 VYAFGIVLYELMTGQ 233
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 154
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 155 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMIE 205
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 99/188 (52%), Gaps = 6/188 (3%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ ++ + L +A + + +L + +HRD+
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDL 138
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYS 496
N L+G N K++DFGLS+++ A + + + PE + K + DV++
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 198
Query: 497 FGIVLLQI 504
FG++L +I
Sbjct: 199 FGVLLWEI 206
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHIT--NEGNVETFVREVASSSHVRHPNLVALLGYCLR 377
IG G G VYKGK + V + ++T ++ F EV RH N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++ + C +L L + I+ ++IA +A+G+ +LH+ S I+HRD+K
Sbjct: 104 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 159
Query: 438 PTNILLGPNFEAKLSDFGLSKVID-IGETYASSEVRGTFGYLDPEYRSNCKVNS---SGD 493
NI L + K+ DFGL+ V ++ ++ G+ ++ PE N D
Sbjct: 160 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 219
Query: 494 VYSFGIVLLQILSGK 508
VY+FGIVL ++++G+
Sbjct: 220 VYAFGIVLYELMTGQ 234
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 24/206 (11%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIKHIT---NEGNVET------FVREVASSSHVRHPNLV 369
IG+G G V+KG+L ++ V AIK + +EG E F REV S++ HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEG 429
L Y L + ++ E P G+L L K + W +L + +D A G+ ++ + +
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP- 143
Query: 430 CIVHRDIKPTNILLGPNFE-----AKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY-- 482
IVHRD++ NI L E AK++DFGLS+ ++ S + G F ++ PE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAPETIG 199
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSGK 508
D YSF ++L IL+G+
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGE 225
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 132/309 (42%), Gaps = 21/309 (6%)
Query: 275 KRYYKSNPPAKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNL-----IGEGITGKVY 329
KR + N K+ + DP + VH ++L+ N+ +G G G+V
Sbjct: 5 KRLHFGNGHLKLPGLR--TFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVC 62
Query: 330 KGKLS----NNQHVAIKHIT---NEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECF 382
G+L VAIK + E F+ E + HPN++ L G +
Sbjct: 63 SGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122
Query: 383 LIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNIL 442
++ E NG+L +L D + IQ + + A G+ +L S+ VHRD+ NIL
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL 179
Query: 443 LGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIV 500
+ N K+SDFGL +V+ D Y + + + PE + K S+ DV+S+GIV
Sbjct: 180 INSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 501 LLQILS-GKKAKVLTRAGSALELADPKLDREYSIEAFDLTLQLALSC-TALTHQRPPMEQ 558
L +++S G++ ++ D ++ QL L C + RP EQ
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 559 VFVTLQKAL 567
+ L K +
Sbjct: 300 IVSILDKLI 308
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 154
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 155 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLDYLPPEMIE 205
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 128
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDYLPPEMIE 179
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 94/203 (46%), Gaps = 31/203 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------ANALSYCHSKR- 132
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG N E K++DFG S +A S R GT YL PE
Sbjct: 133 --VIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 485 NCKVNSSGDVYSFGIVLLQILSG 507
+ D++S G++ + L G
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 94/203 (46%), Gaps = 31/203 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------ANALSYCHSKR- 132
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG N E K++DFG S +A S R GT YL PE
Sbjct: 133 --VIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRDTLCGTLDYLPPEMIE 183
Query: 485 NCKVNSSGDVYSFGIVLLQILSG 507
+ D++S G++ + L G
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 10/194 (5%)
Query: 319 LIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
++G G G V K K + VAIK I +E + F+ E+ S V HPN+V L G CL
Sbjct: 15 VVGRGAFGVVCKAKW-RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-- 71
Query: 379 DECFLIYELCPNGNLAEWLFGKDKCLSWI--QRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
+ L+ E G+L L G + + + + ++G+ +LHS ++HRD+
Sbjct: 72 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDL 131
Query: 437 KPTNILL-GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
KP N+LL K+ DFG + DI +T+ ++ +G+ ++ PE + DV+
Sbjct: 132 KPPNLLLVAGGTVLKICDFGTA--CDI-QTHMTNN-KGSAAWMAPEVFEGSNYSEKCDVF 187
Query: 496 SFGIVLLQILSGKK 509
S+GI+L ++++ +K
Sbjct: 188 SWGIILWEVITRRK 201
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHIT--NEGNVETFVREVASSSHVRHPNLVALLGYCLR 377
IG G G VYKGK + V + ++T ++ F EV RH N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 74
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++ + C +L L + I+ ++IA +A+G+ +LH+ S I+HRD+K
Sbjct: 75 APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 131
Query: 438 PTNILLGPNFEAKLSDFGLSKVID-IGETYASSEVRGTFGYLDPE---YRSNCKVNSSGD 493
NI L + K+ DFGL+ V ++ ++ G+ ++ PE + + D
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 494 VYSFGIVLLQILSGK 508
VY+FGIVL ++++G+
Sbjct: 192 VYAFGIVLYELMTGQ 206
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 145
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 146 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMIE 196
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 197 GRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 131
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMIE 182
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 130
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 131 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYLPPEMIE 181
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 182 GRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 133
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMIE 184
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 133
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEXIE 184
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 185 GRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 129
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 130 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDTLCGTLDYLPPEMIE 180
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 131
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDYLPPEMIE 182
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 129
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 130 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDYLPPEMIE 180
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 128
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMIE 179
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 133
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 134 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDYLPPEMIE 184
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 128
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTELCGTLDYLPPEMIE 179
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 131
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMIE 182
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 128
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDYLPPEMIE 179
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 126/281 (44%), Gaps = 41/281 (14%)
Query: 318 NLIGEGITGKVYKGKLSNN---QHVAIKHITNEGNVETFVREVASSSHV-----RHPNLV 369
++IGEG G+V K ++ + AIK + + + R+ A V HPN++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH-RDFAGELEVLCKLGHHPNII 89
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLF---------------GKDKCLSWIQRLEIAI 414
LLG C +L E P+GNL ++L LS Q L A
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 415 DSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT 474
D ARG+ +L S+ +HRD+ NIL+G N+ AK++DFGLS+ ++ V+ T
Sbjct: 150 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV-------YVKKT 199
Query: 475 FGYLDPEYRSNCKVNSS-----GDVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDR 529
G L + + +N S DV+S+G++L +I+S + L P+ R
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 259
Query: 530 -EYSIEAFDLTLQLALSC-TALTHQRPPMEQVFVTLQKALD 568
E + D L C ++RP Q+ V+L + L+
Sbjct: 260 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 126/281 (44%), Gaps = 41/281 (14%)
Query: 318 NLIGEGITGKVYKGKLSNN---QHVAIKHITNEGNVETFVREVASSSHV-----RHPNLV 369
++IGEG G+V K ++ + AIK + + + R+ A V HPN++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH-RDFAGELEVLCKLGHHPNII 79
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLF---------------GKDKCLSWIQRLEIAI 414
LLG C +L E P+GNL ++L LS Q L A
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 415 DSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT 474
D ARG+ +L S+ +HRD+ NIL+G N+ AK++DFGLS+ ++ V+ T
Sbjct: 140 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV-------YVKKT 189
Query: 475 FGYLDPEYRSNCKVNSS-----GDVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDR 529
G L + + +N S DV+S+G++L +I+S + L P+ R
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 249
Query: 530 -EYSIEAFDLTLQLALSC-TALTHQRPPMEQVFVTLQKALD 568
E + D L C ++RP Q+ V+L + L+
Sbjct: 250 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 290
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 128
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDYLPPEMIE 179
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ +S + L +A + + +L + +HR++
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNL 344
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+TY A + + + PE + K + DV+
Sbjct: 345 AARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 403
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 404 AFGVLLWEI 412
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 131
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYLPPEMIE 182
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 127
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 128 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMIE 178
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 179 GRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 128
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTXLCGTLDYLPPEMIE 179
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 131
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLDYLPPEMIE 182
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 132
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 133 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 128
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYLPPEMIE 179
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 93/204 (45%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + + + A+K + G REV SH+RHPN++ L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 125
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 126 --VIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMIE 176
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 177 GRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 129
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K++DFG S +A S R GT YL PE
Sbjct: 130 --VIHRDIKPENLLLGSAGELKIADFGWS-------CHAPSSRRTTLSGTLDYLPPEMIE 180
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHIT--NEGNVETFVREVASSSHVRHPNLVALLGYCLR 377
IG G G VYKGK + V + ++T ++ F EV RH N++ +GY +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++ + C +L L + + ++IA +ARG+ +LH+ S I+HRD+K
Sbjct: 92 -PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLK 147
Query: 438 PTNILLGPNFEAKLSDFGL-SKVIDIGETYASSEVRGTFGYLDPE---YRSNCKVNSSGD 493
NI L + K+ DFGL ++ ++ ++ G+ ++ PE + + + D
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 494 VYSFGIVLLQILSGK 508
VY+FGIVL ++++G+
Sbjct: 208 VYAFGIVLYELMTGQ 222
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHIT--NEGNVETFVREVASSSHVRHPNLVALLGYCLR 377
IG G G VYKGK + V + ++T ++ F EV RH N++ +GY +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++ + C +L L + I+ ++IA +A+G+ +LH+ S I+HRD+K
Sbjct: 76 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 131
Query: 438 PTNILLGPNFEAKLSDFGL-SKVIDIGETYASSEVRGTFGYLDPE---YRSNCKVNSSGD 493
NI L + K+ DFGL ++ ++ ++ G+ ++ PE + + D
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 494 VYSFGIVLLQILSGK 508
VY+FGIVL ++++G+
Sbjct: 192 VYAFGIVLYELMTGQ 206
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHIT--NEGNVETFVREVASSSHVRHPNLVALLGYCLR 377
IG G G VYKGK + V + ++T ++ F EV RH N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++ + C +L L + + ++IA +ARG+ +LH+ S I+HRD+K
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLK 147
Query: 438 PTNILLGPNFEAKLSDFGL-SKVIDIGETYASSEVRGTFGYLDPE---YRSNCKVNSSGD 493
NI L + K+ DFGL ++ ++ ++ G+ ++ PE + + + D
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 494 VYSFGIVLLQILSGK 508
VY+FGIVL ++++G+
Sbjct: 208 VYAFGIVLYELMTGQ 222
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHIT--NEGNVETFVREVASSSHVRHPNLVALLGYCLR 377
IG G G VYKGK + V + ++T ++ F EV RH N++ +GY +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++ + C +L L + I+ ++IA +A+G+ +LH+ S I+HRD+K
Sbjct: 96 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 151
Query: 438 PTNILLGPNFEAKLSDFGL-SKVIDIGETYASSEVRGTFGYLDPE---YRSNCKVNSSGD 493
NI L + K+ DFGL ++ ++ ++ G+ ++ PE + + D
Sbjct: 152 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 211
Query: 494 VYSFGIVLLQILSGK 508
VY+FGIVL ++++G+
Sbjct: 212 VYAFGIVLYELMTGQ 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHIT--NEGNVETFVREVASSSHVRHPNLVALLGYCLR 377
IG G G VYKGK + V + ++T ++ F EV RH N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++ + C +L L + I+ ++IA +A+G+ +LH+ S I+HRD+K
Sbjct: 104 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 159
Query: 438 PTNILLGPNFEAKLSDFGL-SKVIDIGETYASSEVRGTFGYLDPE---YRSNCKVNSSGD 493
NI L + K+ DFGL ++ ++ ++ G+ ++ PE + + D
Sbjct: 160 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 219
Query: 494 VYSFGIVLLQILSGK 508
VY+FGIVL ++++G+
Sbjct: 220 VYAFGIVLYELMTGQ 234
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 8/190 (4%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLVALLGYCLR 377
+G+G G+V+ G + VAIK + GN+ E F++E +RH LV L +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 250
Query: 378 VDECFLIYELCPNGNLAEWLFGK-DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
+ +++ E G+L ++L G+ K L Q +++A A G+ ++ + VHRD+
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 307
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYS 496
+ NIL+G N K++DFGL ++I+ E A + + PE + DV+S
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 367
Query: 497 FGIVLLQILS 506
FGI+L ++ +
Sbjct: 368 FGILLTELTT 377
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 8/190 (4%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 379 DE-CFLIYELCPNGNLAEWLFGK-DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
+E +++ E G+L ++L G+ K L Q +++A A G+ ++ + VHRD+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYS 496
+ NIL+G N K++DFGL+++I+ E A + + PE + DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 497 FGIVLLQILS 506
FGI+L ++ +
Sbjct: 201 FGILLTELTT 210
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHIT--NEGNVETFVREVAS 359
+I V +K IG+G +G VY ++ Q VAI+ + + E + E+
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 360 SSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARG 419
++PN+V L L DE +++ E G+L + + + C+ Q + + +
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQA 128
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
L FLHS ++HRDIK NILLG + KL+DFG I E SE+ GT ++
Sbjct: 129 LEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSEMVGTPYWMA 184
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
PE + D++S GI+ ++++ G+
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYA-VVSE 84
Query: 379 DECFLIYELCPNGNLAEWLFGK-DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ +++ E G+L ++L G+ K L Q +++A A G+ ++ + VHRD++
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 141
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
NIL+G N K++DFGL+++I+ E A + + PE + DV+SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 498 GIVLLQILS 506
GI+L ++ +
Sbjct: 202 GILLTELTT 210
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIKHIT---NEGNVET------FVREVASSSHVRHPNLV 369
IG+G G V+KG+L ++ V AIK + +EG E F REV S++ HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEG 429
L Y L + ++ E P G+L L K + W +L + +D A G+ ++ + +
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP- 143
Query: 430 CIVHRDIKPTNILLGPNFE-----AKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY-- 482
IVHRD++ NI L E AK++DFG S+ ++ S + G F ++ PE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAPETIG 199
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSGK 508
D YSF ++L IL+G+
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 18/206 (8%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPN 367
EK +L +GEG G VYK K S + VA+K I +EG T +RE++ + HPN
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 368 LVALLGYCLRVDECF-LIYELCPNGNLAEWLFGKDKCLSWIQRLEIAI---DSARGLWFL 423
+V+L+ + + C L++E +L + L D+ + +Q +I I RG+
Sbjct: 81 IVSLID-VIHSERCLTLVFEFM-EKDLKKVL---DENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-Y 482
H + I+HRD+KP N+L+ + KL+DFGL++ I + EV T Y P+
Sbjct: 136 HQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVL 191
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSGK 508
+ K ++S D++S G + ++++GK
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 14/192 (7%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY G + VA+K + + VE F++E A ++HPNLV LLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC----LSWIQRLEIAIDSARGLWFLHSYSEGCIVH 433
+++ E P GNL ++L +C ++ + L +A + + +L + +H
Sbjct: 100 EPPFYIVTEYMPYGNLLDYL---RECNREEVTAVVLLYMATQISSAMEYLEKKN---FIH 153
Query: 434 RDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSG 492
RD+ N L+G N K++DFGLS+++ G+TY A + + + PE + +
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 493 DVYSFGIVLLQI 504
DV++FG++L +I
Sbjct: 213 DVWAFGVLLWEI 224
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 31/237 (13%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVAL 371
++L L IG+G G V G N+ VA+K I N+ + F+ E + + +RH NLV L
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQL 251
Query: 372 LGYCLRVDE---CFLIYELCPNGNLAEWLFGKDK------CLSWIQRLEIAIDSARGLWF 422
LG V+E +++ E G+L ++L + + CL L+ ++D + +
Sbjct: 252 LGVI--VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEY 304
Query: 423 LHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
L + VHRD+ N+L+ + AK+SDFGL+K + V+ T PE
Sbjct: 305 LEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEA 357
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSGKKAKVLTRAGSALELAD--PKLDREYSIEAFD 537
K ++ DV+SFGI+L +I S + + L D P++++ Y ++A D
Sbjct: 358 LREKKFSTKSDVWSFGILLWEIYSFGRVPY-----PRIPLKDVVPRVEKGYKMDAPD 409
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 378 VDECFLIYELCPNGNLAEWLFG-KDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L + ++ + L +A + + +L + +HR++
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNL 341
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+TY A + + + PE + K + DV+
Sbjct: 342 AARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 400
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 401 AFGVLLWEI 409
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 18/206 (8%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPN 367
EK +L +GEG G VYK K S + VA+K I +EG T +RE++ + HPN
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 368 LVALLGYCLRVDECF-LIYELCPNGNLAEWLFGKDKCLSWIQRLEIAI---DSARGLWFL 423
+V+L+ + + C L++E +L + L D+ + +Q +I I RG+
Sbjct: 81 IVSLID-VIHSERCLTLVFEFM-EKDLKKVL---DENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-Y 482
H + I+HRD+KP N+L+ + KL+DFGL++ I + EV T Y P+
Sbjct: 136 HQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVL 191
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSGK 508
+ K ++S D++S G + ++++GK
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 320 IGEGITGKVYKGKLSN-NQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLR 377
+G G G+VY+G + VA+K + + VE F++E A ++HPNLV LLG C R
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKC-LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++I E GNL ++L ++ ++ + L +A + + +L + +HR++
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNL 383
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N L+G N K++DFGLS+++ G+TY A + + + PE + K + DV+
Sbjct: 384 AARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 442
Query: 496 SFGIVLLQI 504
+FG++L +I
Sbjct: 443 AFGVLLWEI 451
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 130
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K+++FG S +A S R GT YL PE
Sbjct: 131 --VIHRDIKPENLLLGSAGELKIANFGWS-------VHAPSSRRTTLCGTLDYLPPEMIE 181
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 182 GRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIKHIT---NEGNVET------FVREVASSSHVRHPNLV 369
IG+G G V+KG+L ++ V AIK + +EG E F REV S++ HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEG 429
L Y L + ++ E P G+L L K + W +L + +D A G+ ++ + +
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP- 143
Query: 430 CIVHRDIKPTNILLGPNFE-----AKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY-- 482
IVHRD++ NI L E AK++DF LS+ ++ S + G F ++ PE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAPETIG 199
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSGK 508
D YSF ++L IL+G+
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGE 225
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + ++ + A+K + G REV SH+RHPN++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +LI E P G + L F + + ++I L A L + HS
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSKR- 131
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+LLG E K+++FG S +A S R GT YL PE
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIANFGWS-------VHAPSSRRTTLCGTLDYLPPEMIE 182
Query: 485 NCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G++ + L GK
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 126/281 (44%), Gaps = 41/281 (14%)
Query: 318 NLIGEGITGKVYKGKLSNN---QHVAIKHITNEGNVETFVREVASSSHV-----RHPNLV 369
++IGEG G+V K ++ + AIK + + + R+ A V HPN++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH-RDFAGELEVLCKLGHHPNII 86
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLF---------------GKDKCLSWIQRLEIAI 414
LLG C +L E P+GNL ++L LS Q L A
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 415 DSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT 474
D ARG+ +L S+ +HR++ NIL+G N+ AK++DFGLS+ ++ V+ T
Sbjct: 147 DVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEV-------YVKKT 196
Query: 475 FGYLDPEYRSNCKVNSS-----GDVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDR 529
G L + + +N S DV+S+G++L +I+S + L P+ R
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 256
Query: 530 -EYSIEAFDLTLQLALSC-TALTHQRPPMEQVFVTLQKALD 568
E + D L C ++RP Q+ V+L + L+
Sbjct: 257 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 297
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 77
Query: 379 DECFLIYELCPNGNLAEWLFGKD-KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ +++ E G+L ++L G+ K L Q +++A A G+ ++ + VHRD++
Sbjct: 78 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 134
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
NIL+G N K++DFGL+++I+ E A + + PE + DV+SF
Sbjct: 135 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 194
Query: 498 GIVLLQILS 506
GI+L ++ +
Sbjct: 195 GILLTELTT 203
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 8/190 (4%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 379 DE-CFLIYELCPNGNLAEWLFGK-DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
+E +++ E G+L ++L G+ K L Q +++A A G+ ++ + VHRD+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYS 496
+ NIL+G N K++DFGL+++I+ E A + + PE + DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 497 FGIVLLQILS 506
FGI+L ++ +
Sbjct: 201 FGILLTELTT 210
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 31/237 (13%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVAL 371
++L L IG+G G V G N+ VA+K I N+ + F+ E + + +RH NLV L
Sbjct: 21 KELKLLQTIGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQL 79
Query: 372 LGYCLRVDE---CFLIYELCPNGNLAEWLFGKDK------CLSWIQRLEIAIDSARGLWF 422
LG V+E +++ E G+L ++L + + CL L+ ++D + +
Sbjct: 80 LGVI--VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEY 132
Query: 423 LHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
L + VHRD+ N+L+ + AK+SDFGL+K + V+ T PE
Sbjct: 133 LEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEA 185
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSGKKAKVLTRAGSALELAD--PKLDREYSIEAFD 537
K ++ DV+SFGI+L +I S + + L D P++++ Y ++A D
Sbjct: 186 LREKKFSTKSDVWSFGILLWEIYSFGRVPY-----PRIPLKDVVPRVEKGYKMDAPD 237
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 31/237 (13%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVAL 371
++L L IG+G G V G N+ VA+K I N+ + F+ E + + +RH NLV L
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQL 64
Query: 372 LGYCLRVDE---CFLIYELCPNGNLAEWLFGKDK------CLSWIQRLEIAIDSARGLWF 422
LG V+E +++ E G+L ++L + + CL L+ ++D + +
Sbjct: 65 LGVI--VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEY 117
Query: 423 LHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
L + VHRD+ N+L+ + AK+SDFGL+K + V+ T PE
Sbjct: 118 LEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEA 170
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSGKKAKVLTRAGSALELAD--PKLDREYSIEAFD 537
K ++ DV+SFGI+L +I S + + L D P++++ Y ++A D
Sbjct: 171 LREKKFSTKSDVWSFGILLWEIYSFGRVPY-----PRIPLKDVVPRVEKGYKMDAPD 222
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 73
Query: 379 DECFLIYELCPNGNLAEWLFGK-DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ +++ E G+L ++L G+ K L Q +++A A G+ ++ + VHRD++
Sbjct: 74 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 130
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
NIL+G N K++DFGL+++I+ E A + + PE + DV+SF
Sbjct: 131 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 190
Query: 498 GIVLLQILS 506
GI+L ++ +
Sbjct: 191 GILLTELTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 75
Query: 379 DECFLIYELCPNGNLAEWLFGK-DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ +++ E G+L ++L G+ K L Q +++A A G+ ++ + VHRD++
Sbjct: 76 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 132
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
NIL+G N K++DFGL+++I+ E A + + PE + DV+SF
Sbjct: 133 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 192
Query: 498 GIVLLQILS 506
GI+L ++ +
Sbjct: 193 GILLTELTT 201
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 8/190 (4%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 379 DE-CFLIYELCPNGNLAEWLFGK-DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
+E +++ E G+L ++L G+ K L Q +++A A G+ ++ + VHRD+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYS 496
+ NIL+G N K++DFGL+++I+ E A + + PE + DV+S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 497 FGIVLLQILS 506
FGI+L ++ +
Sbjct: 201 FGILLTELTT 210
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 379 DECFLIYELCPNGNLAEWLFGKD-KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ +++ E G+L ++L G+ K L Q +++A A G+ ++ + VHRD++
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 307
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
NIL+G N K++DFGL+++I+ E A + + PE + DV+SF
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 498 GIVLLQILS 506
GI+L ++ +
Sbjct: 368 GILLTELTT 376
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAI-------KHITNEGNVETFVR 355
+ R+ E++ IGEG G V++G + ++ A+ K+ T++ E F++
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 356 EVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAID 415
E + HP++V L+G + + ++I ELC G L +L + L + A
Sbjct: 89 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 147
Query: 416 SARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTF 475
+ L +L S VHRDI N+L+ N KL DFGLS+ ++ Y +S+ +
Sbjct: 148 LSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 204
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
++ PE + + S+ DV+ FG+ + +IL
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 379 DECFLIYELCPNGNLAEWLFGKD-KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ +++ E G+L ++L G+ K L Q +++A A G+ ++ + VHRD++
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 307
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
NIL+G N K++DFGL+++I+ E A + + PE + DV+SF
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 498 GIVLLQILS 506
GI+L ++ +
Sbjct: 368 GILLTELTT 376
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAI-------KHITNEGNVETFVR 355
+ R+ E++ IGEG G V++G + ++ A+ K+ T++ E F++
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 356 EVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAID 415
E + HP++V L+G + + ++I ELC G L +L + L + A
Sbjct: 63 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 121
Query: 416 SARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTF 475
+ L +L S VHRDI N+L+ N KL DFGLS+ ++ Y +S+ +
Sbjct: 122 LSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 178
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
++ PE + + S+ DV+ FG+ + +IL
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAI-------KHITNEGNVETFVR 355
+ R+ E++ IGEG G V++G + ++ A+ K+ T++ E F++
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 356 EVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAID 415
E + HP++V L+G + + ++I ELC G L +L + L + A
Sbjct: 66 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 124
Query: 416 SARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTF 475
+ L +L S VHRDI N+L+ N KL DFGLS+ ++ Y +S+ +
Sbjct: 125 LSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 181
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
++ PE + + S+ DV+ FG+ + +IL
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 19/183 (10%)
Query: 336 NQHVAIKHI-----TNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPN 390
N VAIK I E ++ F REV +SS + H N+V+++ D +L+ E
Sbjct: 36 NIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95
Query: 391 GNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGP 445
L+E++ D +++ ++ I A + IVHRDIKP NIL+
Sbjct: 96 PTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMR---------IVHRDIKPQNILIDS 146
Query: 446 NFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
N K+ DFG++K + ++ V GT Y PE + D+YS GIVL ++L
Sbjct: 147 NKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEML 206
Query: 506 SGK 508
G+
Sbjct: 207 VGE 209
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAI-------KHITNEGNVETFVR 355
+ R+ E++ IGEG G V++G + ++ A+ K+ T++ E F++
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 356 EVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAID 415
E + HP++V L+G + + ++I ELC G L +L + L + A
Sbjct: 64 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 122
Query: 416 SARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTF 475
+ L +L S VHRDI N+L+ N KL DFGLS+ ++ Y +S+ +
Sbjct: 123 LSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 179
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
++ PE + + S+ DV+ FG+ + +IL
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAI-------KHITNEGNVETFVR 355
+ R+ E++ IGEG G V++G + ++ A+ K+ T++ E F++
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 356 EVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAID 415
E + HP++V L+G + + ++I ELC G L +L + L + A
Sbjct: 61 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 119
Query: 416 SARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTF 475
+ L +L S VHRDI N+L+ N KL DFGLS+ ++ Y +S+ +
Sbjct: 120 LSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
++ PE + + S+ DV+ FG+ + +IL
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 296 DPGCPRYTIREVHYATEKLNEL-----NLIGEGITGKVYKGKLS----NNQHVAIKHIT- 345
DP R VH ++L+ +IG G G+V G+L + VAIK +
Sbjct: 22 DPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKV 81
Query: 346 --NEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKC 403
E F+ E + HPN+V L G R ++ E NG L +L D
Sbjct: 82 GYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ 141
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI--D 461
+ IQ + + A G+ +L ++ VHRD+ NIL+ N K+SDFGLS+VI D
Sbjct: 142 FTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 462 IGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
Y ++ + + PE K S+ DV+S+GIV+ +++S
Sbjct: 199 PEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAI-------KHITNEGNVETFVR 355
+ R+ E++ IGEG G V++G + ++ A+ K+ T++ E F++
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 356 EVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAID 415
E + HP++V L+G + + ++I ELC G L +L + L + A
Sbjct: 61 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 119
Query: 416 SARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTF 475
+ L +L S VHRDI N+L+ N KL DFGLS+ ++ Y +S+ +
Sbjct: 120 LSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
++ PE + + S+ DV+ FG+ + +IL
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 379 DECFLIYELCPNGNLAEWLFGK-DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ +++ E G+L ++L G+ K L Q +++A A G+ ++ + VHRD++
Sbjct: 85 EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 141
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
NIL+G N K++DFGL+++I+ E A + + PE + DV+SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 498 GIVLLQILS 506
GI+L ++ +
Sbjct: 202 GILLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 379 DECFLIYELCPNGNLAEWLFGKD-KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ +++ E G+L ++L G+ K L Q +++A A G+ ++ + VHRD++
Sbjct: 251 EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 307
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
NIL+G N K++DFGL+++I+ E A + + PE + DV+SF
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 498 GIVLLQILS 506
GI+L ++ +
Sbjct: 368 GILLTELTT 376
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + N+ + A+K + EG RE+ SH+RHPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +L+ E P G L + L F + + ++++ L A LH E
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA---------LHYCHE 132
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+L+G E K++DFG S +A S R GT YL PE
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 485 NCKVNSSGDVYSFGIVLLQILSG 507
+ D++ G++ + L G
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 9/209 (4%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHIT--NEGNVETFVREVAS 359
+I V +K IG+G +G VY ++ Q VAI+ + + E + E+
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 360 SSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARG 419
++PN+V L L DE +++ E G+L + + + C+ Q + + +
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQA 128
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
L FLHS ++HRDIK NILLG + KL+DFG I ++ S+ V GT ++
Sbjct: 129 LEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMA 184
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
PE + D++S GI+ ++++ G+
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 8/190 (4%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L Y +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 332
Query: 379 DE-CFLIYELCPNGNLAEWLFGK-DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
+E +++ E G+L ++L G+ K L Q +++A A G+ ++ + VHRD+
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 389
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYS 496
+ NIL+G N K++DFGL+++I+ E A + + PE + DV+S
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 449
Query: 497 FGIVLLQILS 506
FGI+L ++ +
Sbjct: 450 FGILLTELTT 459
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + N+ + A+K + EG RE+ SH+RHPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +L+ E P G L + L F + + ++++ L A LH E
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA---------LHYCHE 132
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+L+G E K++DFG S +A S R GT YL PE
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 485 NCKVNSSGDVYSFGIVLLQILSG 507
+ D++ G++ + L G
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 8/190 (4%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L Y +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 73
Query: 379 DECF-LIYELCPNGNLAEWLFGKD-KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
+E ++ E G+L ++L G+ K L Q +++A A G+ ++ + VHRD+
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 130
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYS 496
+ NIL+G N K++DFGL+++I+ E A + + PE + DV+S
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 190
Query: 497 FGIVLLQILS 506
FGI+L ++ +
Sbjct: 191 FGILLTELTT 200
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 31/203 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPNLVALLG 373
+G+G G VY + N+ + A+K + EG RE+ SH+RHPN++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 374 YCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
Y +L+ E P G L + L F + + ++++ L A LH E
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA---------LHYCHE 133
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR----GTFGYLDPEYRS 484
++HRDIKP N+L+G E K++DFG S +A S R GT YL PE
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEMIE 186
Query: 485 NCKVNSSGDVYSFGIVLLQILSG 507
+ D++ G++ + L G
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 6/189 (3%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 379 DECFLIYELCPNGNLAEWLFGK-DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ +++ E G L ++L G+ K L Q +++A A G+ ++ + VHRD++
Sbjct: 85 EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 141
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
NIL+G N K++DFGL+++I+ E A + + PE + DV+SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 498 GIVLLQILS 506
GI+L ++ +
Sbjct: 202 GILLTELTT 210
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 115/237 (48%), Gaps = 31/237 (13%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVAL 371
++L L IG+G G V G N+ VA+K I N+ + F+ E + + +RH NLV L
Sbjct: 12 KELKLLQTIGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQL 70
Query: 372 LGYCLRVDE---CFLIYELCPNGNLAEWLFGKDK------CLSWIQRLEIAIDSARGLWF 422
LG V+E +++ E G+L ++L + + CL L+ ++D + +
Sbjct: 71 LGVI--VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-----LKFSLDVCEAMEY 123
Query: 423 LHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
L + VHRD+ N+L+ + AK+SDFGL+K + V+ T PE
Sbjct: 124 LEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEA 176
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSGKKAKVLTRAGSALELAD--PKLDREYSIEAFD 537
++ DV+SFGI+L +I S + + L D P++++ Y ++A D
Sbjct: 177 LREAAFSTKSDVWSFGILLWEIYSFGRVPY-----PRIPLKDVVPRVEKGYKMDAPD 228
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 8/190 (4%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 379 DE-CFLIYELCPNGNLAEWLFGK-DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
+E +++ E G+L ++L G+ K L Q +++A A G+ ++ + VHRD+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYS 496
NIL+G N K++DFGL+++I+ E A + + PE + DV+S
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 497 FGIVLLQILS 506
FGI+L ++ +
Sbjct: 201 FGILLTELTT 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 6/189 (3%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 379 DECFLIYELCPNGNLAEWLFGK-DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ +++ E G L ++L G+ K L Q +++A A G+ ++ + VHRD++
Sbjct: 85 EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 141
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
NIL+G N K++DFGL+++I+ E A + + PE + DV+SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 498 GIVLLQILS 506
GI+L ++ +
Sbjct: 202 GILLTELTT 210
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 9/209 (4%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHIT--NEGNVETFVREVAS 359
+I V +K IG+G +G VY ++ Q VAI+ + + E + E+
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 360 SSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARG 419
++PN+V L L DE +++ E G+L + + + C+ Q + + +
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQA 128
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
L FLHS ++HRDIK NILLG + KL+DFG I E S + GT ++
Sbjct: 129 LEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSXMVGTPYWMA 184
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
PE + D++S GI+ ++++ G+
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 320 IGEGITGKVYKGKLSNNQHVAI-------KHITNEGNVETFVREVASSSHVRHPNLVALL 372
IGEG G V++G + ++ A+ K+ T++ E F++E + HP++V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 373 GYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIV 432
G + + ++I ELC G L +L + L + A + L +L S V
Sbjct: 75 G-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FV 130
Query: 433 HRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSG 492
HRDI N+L+ N KL DFGLS+ ++ Y +S+ + ++ PE + + S+
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 190
Query: 493 DVYSFGIVLLQIL 505
DV+ FG+ + +IL
Sbjct: 191 DVWMFGVCMWEIL 203
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 9/209 (4%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHIT--NEGNVETFVREVAS 359
+I V +K IG+G +G VY ++ Q VAI+ + + E + E+
Sbjct: 12 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 71
Query: 360 SSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARG 419
++PN+V L L DE +++ E G+L + + + C+ Q + + +
Sbjct: 72 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQA 129
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
L FLHS ++HRDIK NILLG + KL+DFG I E S + GT ++
Sbjct: 130 LEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSXMVGTPYWMA 185
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
PE + D++S GI+ ++++ G+
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 81
Query: 379 DECFLIYELCPNGNLAEWLFGKD-KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ +++ E G+L ++L G+ K L Q ++++ A G+ ++ + VHRD++
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDLR 138
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
NIL+G N K++DFGL+++I+ E A + + PE + DV+SF
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 198
Query: 498 GIVLLQILS 506
GI+L ++ +
Sbjct: 199 GILLTELTT 207
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAI-------KHITNEGNVETFVR 355
+ R+ E++ IGEG G V++G + ++ A+ K+ T++ E F++
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 356 EVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAID 415
E + HP++V L+G + + ++I ELC G L +L + L + A
Sbjct: 441 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 499
Query: 416 SARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTF 475
+ L +L S VHRDI N+L+ N KL DFGLS+ ++ Y +S+ +
Sbjct: 500 LSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
++ PE + + S+ DV+ FG+ + +IL
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 8/190 (4%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G+G G+V+ G + VAIK + + E F++E +RH LV L Y +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 80
Query: 379 DE-CFLIYELCPNGNLAEWLFGKD-KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
+E +++ E G+L ++L G+ K L Q ++++ A G+ ++ + VHRD+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDL 137
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYS 496
+ NIL+G N K++DFGL+++I+ E A + + PE + DV+S
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 497 FGIVLLQILS 506
FGI+L ++ +
Sbjct: 198 FGILLTELTT 207
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 95/192 (49%), Gaps = 8/192 (4%)
Query: 320 IGEGITGKVYKGKL-SNNQHVAIKHITNEGNVE---TFVREVASSSHVRHPNLVALLGYC 375
IG G G+V+ G+L ++N VA+K + F++E HPN+V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 376 LRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRD 435
+ +++ EL G+ +L + L L++ D+A G+ +L S C +HRD
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRD 238
Query: 436 IKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT-FGYLDPEYRSNCKVNSSGDV 494
+ N L+ K+SDFG+S+ G AS +R + PE + + +S DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 495 YSFGIVLLQILS 506
+SFGI+L + S
Sbjct: 299 WSFGILLWETFS 310
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 95/192 (49%), Gaps = 8/192 (4%)
Query: 320 IGEGITGKVYKGKL-SNNQHVAIKHITNEGNVE---TFVREVASSSHVRHPNLVALLGYC 375
IG G G+V+ G+L ++N VA+K + F++E HPN+V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 376 LRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRD 435
+ +++ EL G+ +L + L L++ D+A G+ +L S C +HRD
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRD 238
Query: 436 IKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT-FGYLDPEYRSNCKVNSSGDV 494
+ N L+ K+SDFG+S+ G AS +R + PE + + +S DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 495 YSFGIVLLQILS 506
+SFGI+L + S
Sbjct: 299 WSFGILLWETFS 310
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAI-------KHITNEGNVETFVR 355
+ R+ E++ IGEG G V++G + ++ A+ K+ T++ E F++
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 356 EVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAID 415
E + HP++V L+G + + ++I ELC G L +L + L + A
Sbjct: 61 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 119
Query: 416 SARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTF 475
+ L +L S VHRDI N+L+ KL DFGLS+ ++ Y +S+ +
Sbjct: 120 LSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
++ PE + + S+ DV+ FG+ + +IL
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 9/192 (4%)
Query: 320 IGEGITGKVYKG-KLSNNQHVAIKHIT--NEGNVETFVREVASSSHVRHPNLVALLGYCL 376
IG+G +G VY ++ Q VAI+ + + E + E+ ++PN+V L L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 377 RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
DE +++ E G+L + + + C+ Q + + + L FLHS ++HR+I
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRNI 143
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYS 496
K NILLG + KL+DFG I ++ S+ V GT ++ PE + D++S
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWS 202
Query: 497 FGIVLLQILSGK 508
GI+ ++++ G+
Sbjct: 203 LGIMAIEMIEGE 214
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 15/222 (6%)
Query: 295 KDPG-CPRYTIREVHYATEKLNELNLIGEGITGKVYKGKL----SNNQHVAIKHIT---N 346
++PG R RE+ +++ +IG G +G+V G+L + VAIK +
Sbjct: 33 EEPGRAGRSFTREIE--ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 347 EGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSW 406
E F+ E + HPN++ L G R ++ E NG+L +L D +
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 407 IQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGE 464
+Q + + G+ +L S+ VHRD+ N+L+ N K+SDFGLS+V+ D
Sbjct: 151 MQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 465 TYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
Y ++ + + PE + +S+ DV+SFG+V+ ++L+
Sbjct: 208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAI-------KHITNEGNVETFVR 355
+ R+ E++ IGEG G V++G + ++ A+ K+ T++ E F++
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 356 EVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAID 415
E + HP++V L+G + + ++I ELC G L +L + L + A
Sbjct: 61 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 119
Query: 416 SARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTF 475
+ L +L S VHRDI N+L+ N KL DFGLS+ ++ +S+ +
Sbjct: 120 LSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI 176
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
++ PE + + S+ DV+ FG+ + +IL
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAI-------KHITNEGNVETFVR 355
+ R+ E++ IGEG G V++G + ++ A+ K+ T++ E F++
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 356 EVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAID 415
E + HP++V L+G + + ++I ELC G L +L + L + A
Sbjct: 441 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 499
Query: 416 SARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTF 475
+ L +L S VHRDI N+L+ KL DFGLS+ ++ Y +S+ +
Sbjct: 500 LSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
++ PE + + S+ DV+ FG+ + +IL
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 15/222 (6%)
Query: 295 KDPG-CPRYTIREVHYATEKLNELNLIGEGITGKVYKGKL----SNNQHVAIKHIT---N 346
++PG R RE+ +++ +IG G +G+V G+L + VAIK +
Sbjct: 33 EEPGRAGRSFTREIE--ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 347 EGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSW 406
E F+ E + HPN++ L G R ++ E NG+L +L D +
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 407 IQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY 466
+Q + + G+ +L S+ VHRD+ N+L+ N K+SDFGLS+V++
Sbjct: 151 MQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 467 ASSEVRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
A + G + PE + +S+ DV+SFG+V+ ++L+
Sbjct: 208 AXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 319 LIGEGITGKVYKGKLS----NNQHVAIKHIT---NEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G+V G+L VAIK + E F+ E + HPN++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
G + ++ E NG+L +L D + IQ + + + G+ +L S+
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL---SDMGY 145
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKVN 489
VHRD+ NIL+ N K+SDFGLS+V+ D Y + + + PE + K
Sbjct: 146 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFT 205
Query: 490 SSGDVYSFGIVLLQILS 506
S+ DV+S+GIV+ +++S
Sbjct: 206 SASDVWSYGIVMWEVVS 222
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 8/198 (4%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVA 370
E L + +G G G+V+ G + N VAIK + + E+F+ E ++H LV
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQ 68
Query: 371 LLGYCLRVDE-CFLIYELCPNGNLAEWLF-GKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
L Y + +E +++ E G+L ++L G+ + L +++A A G+ ++ +
Sbjct: 69 L--YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN- 125
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKV 488
+HRD++ NIL+G K++DFGL+++I+ E A + + PE +
Sbjct: 126 --YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 183
Query: 489 NSSGDVYSFGIVLLQILS 506
DV+SFGI+L ++++
Sbjct: 184 TIKSDVWSFGILLTELVT 201
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 319 LIGEGITGKVYKGKLSNNQH----VAIKHIT---NEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G+V G+L VAIK + + F+ E + HPN++ L
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
G + +I E NG+L +L D + IQ + + G+ +L S
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA--- 152
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKVN 489
VHRD+ NIL+ N K+SDFG+S+V+ D Y + + + PE + K
Sbjct: 153 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 212
Query: 490 SSGDVYSFGIVLLQILS 506
S+ DV+S+GIV+ +++S
Sbjct: 213 SASDVWSYGIVMWEVMS 229
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 9/219 (4%)
Query: 291 GVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV 350
G Q + P P + E E L + +G G G+V+ G + + VA+K + +G++
Sbjct: 1 GSQTQKPQKPWWE-DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSM 58
Query: 351 --ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQ 408
+ F+ E ++H LV L + + ++I E NG+L ++L I
Sbjct: 59 SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN 117
Query: 409 RL-EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA 467
+L ++A A G+ F+ E +HRD++ NIL+ K++DFGL+++I+ E A
Sbjct: 118 KLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 174
Query: 468 SSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ + PE + DV+SFGI+L +I++
Sbjct: 175 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 319 LIGEGITGKVYKGKLSNNQH----VAIKHIT---NEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G+V G+L VAIK + + F+ E + HPN++ L
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
G + +I E NG+L +L D + IQ + + G+ +L S
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS---Y 131
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKVN 489
VHRD+ NIL+ N K+SDFG+S+V+ D Y + + + PE + K
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 191
Query: 490 SSGDVYSFGIVLLQILS 506
S+ DV+S+GIV+ +++S
Sbjct: 192 SASDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 319 LIGEGITGKVYKGKLSNNQH----VAIKHIT---NEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G+V G+L VAIK + + F+ E + HPN++ L
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
G + +I E NG+L +L D + IQ + + G+ +L S
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS---Y 137
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKVN 489
VHRD+ NIL+ N K+SDFG+S+V+ D Y + + + PE + K
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 197
Query: 490 SSGDVYSFGIVLLQILS 506
S+ DV+S+GIV+ +++S
Sbjct: 198 SASDVWSYGIVMWEVMS 214
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 26/231 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
E ++ IGEG G VYK + + VA+K I EG T +RE++ + HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLWFL 423
N+V LL ++ +L++E + +L + F L+ I I +GL F
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
HS+ ++HRD+KP N+L+ KL+DFGL++ + + EV T Y PE
Sbjct: 127 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 182
Query: 484 SNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 183 LGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 223
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 112/233 (48%), Gaps = 26/233 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE 481
F HS+ ++HRD+KP N+L+ KL+DFGL++ + + EV T Y PE
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 174
Query: 482 YRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 217
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Query: 314 LNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLVAL 371
L L +G G G V GK VAIK I EG++ + F+ E ++ H LV L
Sbjct: 11 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
G C + F+I E NG L +L Q LE+ D + +L S
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---F 126
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSS 491
+HRD+ N L+ K+SDFGLS+ + E +S + + PE K +S
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 492 GDVYSFGIVLLQILS 506
D+++FG+++ +I S
Sbjct: 187 SDIWAFGVLMWEIYS 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 26/231 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
E ++ IGEG G VYK + + VA+K I EG T +RE++ + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLWFL 423
N+V LL ++ +L++E + +L + F L+ I I +GL F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
HS+ ++HRD+KP N+L+ KL+DFGL++ + + EV T Y PE
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEIL 175
Query: 484 SNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 176 LGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 216
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 26/231 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
E ++ IGEG G VYK + + VA+K I EG T +RE++ + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLWFL 423
N+V LL ++ +L++E + +L + F L+ I I +GL F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
HS+ ++HRD+KP N+L+ KL+DFGL++ + + EV T Y PE
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEIL 174
Query: 484 SNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 175 LGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 215
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 26/231 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
E ++ IGEG G VYK + + VA+K I EG T +RE++ + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLWFL 423
N+V LL ++ +L++E + +L + F L+ I I +GL F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
HS+ ++HRD+KP N+L+ KL+DFGL++ + + EV T Y PE
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEIL 174
Query: 484 SNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 175 LGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 215
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 216
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 26/231 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
E ++ IGEG G VYK + + VA+K I EG T +RE++ + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLWFL 423
N+V LL ++ +L++E + +L + F L+ I I +GL F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
HS+ ++HRD+KP N+L+ KL+DFGL++ + + EV T Y PE
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 484 SNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 176 LGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 216
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 216
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Query: 314 LNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLVAL 371
L L +G G G V GK VAIK I EG++ + F+ E ++ H LV L
Sbjct: 26 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
G C + F+I E NG L +L Q LE+ D + +L S
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---F 141
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSS 491
+HRD+ N L+ K+SDFGLS+ + E +S + + PE K +S
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 492 GDVYSFGIVLLQILS 506
D+++FG+++ +I S
Sbjct: 202 SDIWAFGVLMWEIYS 216
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Query: 314 LNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLVAL 371
L L +G G G V GK VAIK I EG++ + F+ E ++ H LV L
Sbjct: 10 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQL 68
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
G C + F+I E NG L +L Q LE+ D + +L S
Sbjct: 69 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---F 125
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSS 491
+HRD+ N L+ K+SDFGLS+ + E +S + + PE K +S
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 492 GDVYSFGIVLLQILS 506
D+++FG+++ +I S
Sbjct: 186 SDIWAFGVLMWEIYS 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKD--FMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 118 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 216
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 216
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 26/231 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
E ++ IGEG G VYK + + VA+K I EG T +RE++ + HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLWFL 423
N+V LL ++ +L++E + +L + F L+ I I +GL F
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
HS+ ++HRD+KP N+L+ KL+DFGL++ + + EV T Y PE
Sbjct: 124 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEIL 179
Query: 484 SNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 180 LGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 220
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Query: 314 LNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLVAL 371
L L +G G G V GK VAIK I EG++ + F+ E ++ H LV L
Sbjct: 6 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
G C + F+I E NG L +L Q LE+ D + +L S
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---F 121
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSS 491
+HRD+ N L+ K+SDFGLS+ + E +S + + PE K +S
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 492 GDVYSFGIVLLQILS 506
D+++FG+++ +I S
Sbjct: 182 SDIWAFGVLMWEIYS 196
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 218
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 122 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 176
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 220
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 219
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 26/231 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
E ++ IGEG G VYK + + VA+K I EG T +RE++ + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLWFL 423
N+V LL ++ +L++E + +L + F L+ I I +GL F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
HS+ ++HRD+KP N+L+ KL+DFGL++ + + EV T Y PE
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEIL 175
Query: 484 SNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 176 LGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 216
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 218
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLS----NNQHVAIKHITN---EGNVETFVREVASSSHVRHPNLVAL 371
+IG G G+V G L VAIK + + E F+ E + HPN++ L
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
G + +I E NG+L +L D + IQ + + A G+ +L ++
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNY 156
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFG--YLDPEYRSNCK 487
VHRD+ NIL+ N K+SDFGLS+ + D + +S + G + PE K
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 216
Query: 488 VNSSGDVYSFGIVLLQILS 506
S+ DV+S+GIV+ +++S
Sbjct: 217 FTSASDVWSYGIVMWEVMS 235
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKD--FMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 218
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKD--FMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 219
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 119 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 217
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Query: 314 LNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLVAL 371
L L +G G G V GK VAIK I EG++ + F+ E ++ H LV L
Sbjct: 11 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
G C + F+I E NG L +L Q LE+ D + +L S
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---F 126
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSS 491
+HRD+ N L+ K+SDFGLS+ + E +S + + PE K +S
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 492 GDVYSFGIVLLQILS 506
D+++FG+++ +I S
Sbjct: 187 SDIWAFGVLMWEIYS 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 217
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 219
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
E ++ IGEG G VYK + + VA+K I EG T +RE++ + HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLWFL 423
N+V LL ++ +L++E + +L + F L+ I I +GL F
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDPEY 482
HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y PE
Sbjct: 121 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 175
Query: 483 RSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 176 LLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 217
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
E ++ IGEG G VYK + + VA+K I EG T +RE++ + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLWFL 423
N+V LL ++ +L++E + +L + F L+ I I +GL F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDPEY 482
HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y PE
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 173
Query: 483 RSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 174 LLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 215
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 120 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 218
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Query: 314 LNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLVAL 371
L L +G G G V GK VAIK I EG++ + F+ E ++ H LV L
Sbjct: 17 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQL 75
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
G C + F+I E NG L +L Q LE+ D + +L S
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---F 132
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSS 491
+HRD+ N L+ K+SDFGLS+ + E +S + + PE K +S
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 192
Query: 492 GDVYSFGIVLLQILS 506
D+++FG+++ +I S
Sbjct: 193 SDIWAFGVLMWEIYS 207
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
E ++ IGEG G VYK + + VA+K I EG T +RE++ + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLWFL 423
N+V LL ++ +L++E + +L + F L+ I I +GL F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDPEY 482
HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y PE
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 173
Query: 483 RSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 174 LLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 215
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Query: 314 LNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLVAL 371
L L +G G G V GK VAIK I EG++ + F+ E ++ H LV L
Sbjct: 26 LTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
G C + F+I E NG L +L Q LE+ D + +L S
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---F 141
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSS 491
+HRD+ N L+ K+SDFGLS+ + E +S + + PE K +S
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 492 GDVYSFGIVLLQILS 506
D+++FG+++ +I S
Sbjct: 202 SDIWAFGVLMWEIYS 216
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 111/237 (46%), Gaps = 22/237 (9%)
Query: 294 LKDPGCPRYTIREVHYATEKL-NELNLIGEGITGKVYKGK-LSNNQHVAIKHITNEGNV- 350
LKDP ++ EKL ++L IG G G VY + + N++ VAIK ++ G
Sbjct: 38 LKDPDVAELFFKD---DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS 94
Query: 351 ----ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSW 406
+ ++EV +RHPN + G LR +L+ E C G+ ++ L K L
Sbjct: 95 NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQE 153
Query: 407 IQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY 466
++ + + +GL +LHS++ ++HRD+K NILL KL DFG + ++ +
Sbjct: 154 VEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF 210
Query: 467 ASSEVRGTFGYLDPEY---RSNCKVNSSGDVYSFGIVLLQILSGKKAKVLTRAGSAL 520
GT ++ PE + + DV+S GI +++ K A SAL
Sbjct: 211 V-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL 262
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 8/198 (4%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLV 369
E L + +G G G+V+ G + + VA+K + +G++ + F+ E ++H LV
Sbjct: 13 ETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-EIAIDSARGLWFLHSYSE 428
L + + ++I E NG+L ++L I +L ++A A G+ F+ E
Sbjct: 72 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---E 127
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKV 488
+HRD++ NIL+ K++DFGL+++I+ E A + + PE +
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 489 NSSGDVYSFGIVLLQILS 506
DV+SFGI+L +I++
Sbjct: 188 TIKSDVWSFGILLTEIVT 205
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 12/195 (6%)
Query: 320 IGEGITGKVYKG--KLSNNQ-HVAIKHI---TNEGNVETFVREVASSSHVRHPNLVALLG 373
+G G G V +G ++ Q VAIK + T + + E +RE + +P +V L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 374 YCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVH 433
C + + L+ E+ G L ++L GK + + E+ + G+ +L E VH
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVH 133
Query: 434 RDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTF--GYLDPEYRSNCKVNSS 491
RD+ N+LL AK+SDFGLSK + ++Y ++ G + + PE + K +S
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 193
Query: 492 GDVYSFGIVLLQILS 506
DV+S+G+ + + LS
Sbjct: 194 SDVWSYGVTMWEALS 208
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 119 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 217
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ +L S
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--- 153
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT---FGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + E Y+ G ++ E K
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 214 FTTKSDVWSFGVLLWELMT 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ +L S
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--- 148
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT---FGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + E Y+ G ++ E K
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 208
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 209 FTTKSDVWSFGVLLWELMT 227
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ +L S
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--- 171
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT---FGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + E Y+ G ++ E K
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 231
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 232 FTTKSDVWSFGVLLWELMT 250
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 121 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 219
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ +L S
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--- 145
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT---FGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + E Y+ G ++ E K
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 205
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 206 FTTKSDVWSFGVLLWELMT 224
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ +L S
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--- 172
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT---FGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + E Y+ G ++ E K
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 232
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 233 FTTKSDVWSFGVLLWELMT 251
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 9/217 (4%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV-- 350
Q + P P + E E L + +G G G+V+ G + + VA+K + +G++
Sbjct: 1 QTQKPQKPWWE-DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSP 58
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
+ F+ E ++H LV L + + ++I E NG+L ++L I +L
Sbjct: 59 DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKL 117
Query: 411 -EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASS 469
++A A G+ F+ E +HRD++ NIL+ K++DFGL+++I+ E A
Sbjct: 118 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 174
Query: 470 EVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ + PE + DV+SFGI+L +I++
Sbjct: 175 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 305 REVHYATEKLNELNLIGEGITGKVYKGKLS----NNQHVAIKHIT---NEGNVETFVREV 357
+E+ + K+ E+ IG G G+V +G+L VAIK + E F+ E
Sbjct: 9 KEIDVSYVKIEEV--IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEA 66
Query: 358 ASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSA 417
+ HPN++ L G ++ E NG L +L D + IQ + + A
Sbjct: 67 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIA 126
Query: 418 RGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGE---TYASS-EVRG 473
G+ +L +E VHRD+ NIL+ N K+SDFGLS+ ++ TY SS +
Sbjct: 127 SGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKI 183
Query: 474 TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ PE + K S+ D +S+GIV+ +++S
Sbjct: 184 PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ +L S
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--- 150
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT---FGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + E Y+ G ++ E K
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 210
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 211 FTTKSDVWSFGVLLWELMT 229
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ +L S
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--- 152
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT---FGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + E Y+ G ++ E K
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 212
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 213 FTTKSDVWSFGVLLWELMT 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ +L S
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--- 153
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT---FGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + E Y+ G ++ E K
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 214 FTTKSDVWSFGVLLWELMT 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ +L S
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--- 151
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT---FGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + E Y+ G ++ E K
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 211
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 212 FTTKSDVWSFGVLLWELMT 230
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 300 PRYTIREVHYATEKLNELNLIGEGITGKV----YKGKLSNN-QHVAIKHITNE--GN-VE 351
P + H+ L + +GEG GKV Y + N + VA+K + E GN +
Sbjct: 9 PATEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA 68
Query: 352 TFVREVASSSHVRHPNLVALLGYCLRV--DECFLIYELCPNGNLAEWLFGKDKCLSWIQR 409
+E+ ++ H N+V G C + LI E P+G+L E+L ++ Q+
Sbjct: 69 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ 128
Query: 410 LEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGE---TY 466
L+ A+ +G+ +L S VHRD+ N+L+ + K+ DFGL+K I+ + T
Sbjct: 129 LKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTV 185
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
F Y PE K + DV+SFG+ L ++L+
Sbjct: 186 KDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L F L+ I I +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKT--FMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 219
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 292 VQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV- 350
+Q + P P + E E L + +G G G+V+ G + + VA+K + +G++
Sbjct: 4 MQTQKPQKPWWE-DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMS 61
Query: 351 -ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQR 409
+ F+ E ++H LV L + + ++I E NG+L ++L I +
Sbjct: 62 PDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINK 120
Query: 410 L-EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYAS 468
L ++A A G+ F+ E +HRD++ NIL+ K++DFGL+++I+ E A
Sbjct: 121 LLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 177
Query: 469 SEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ + PE + DV+SFGI+L +I++
Sbjct: 178 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
+ E ++ IGEG G VYK + + VA+K I EG T +RE++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLW 421
HPN+V LL ++ +L++E + +L + F L+ I I +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDP 480
F HS+ ++HRD+KP N+L+ KL+DFGL++ + TY V T Y P
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
E CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 219
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 318 NLIGEGITGKVYKG----KLSNNQHVAIK---HITNEGNVETFVREVASSSHVRHPNLVA 370
+IG+G G VY G + N AIK IT VE F+RE + HPN++A
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 371 LLGYCLRVDEC--FLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
L+G L + L+ +C +G+L +++ + + + + ARG+ +L +E
Sbjct: 87 LIGIMLPPEGLPHVLLPYMC-HGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AE 142
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE---VRGTFGYLDPEYRSN 485
VHRD+ N +L +F K++DFGL++ I E Y+ + R + E
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT 202
Query: 486 CKVNSSGDVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSIEAFDLTLQLA 543
+ + DV+SFG++L ++ LTR DP FDLT LA
Sbjct: 203 YRFTTKSDVWSFGVLLWEL--------LTRGAPPYRHIDP----------FDLTHFLA 242
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 9/217 (4%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV-- 350
Q + P P + E E L + +G G G+V+ G + + VA+K + +G++
Sbjct: 1 QTQKPQKPWWE-DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSP 58
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
+ F+ E ++H LV L + + ++I E NG+L ++L I +L
Sbjct: 59 DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKL 117
Query: 411 -EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASS 469
++A A G+ F+ E +HRD++ NIL+ K++DFGL+++I+ E A
Sbjct: 118 LDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 174
Query: 470 EVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ + PE + DV+SFGI+L +I++
Sbjct: 175 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 27/207 (13%)
Query: 320 IGEGITGKVYKGKLSNN--QHVAIKHIT----NEGNVETFVREVASSSHV---RHPNLVA 370
IGEG GKV+K + N + VA+K + EG + +REVA H+ HPN+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 371 LLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSA----RGLW 421
L C R + L++E + +L +L DK E D RGL
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---DKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE 481
FLHS+ +VHRD+KP NIL+ + + KL+DFGL+++ A + V T Y PE
Sbjct: 135 FLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPE 189
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G + ++ K
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 27/207 (13%)
Query: 320 IGEGITGKVYKGKLSNN--QHVAIKHIT----NEGNVETFVREVASSSHV---RHPNLVA 370
IGEG GKV+K + N + VA+K + EG + +REVA H+ HPN+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 371 LLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSA----RGLW 421
L C R + L++E + +L +L DK E D RGL
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---DKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE 481
FLHS+ +VHRD+KP NIL+ + + KL+DFGL+++ A + V T Y PE
Sbjct: 135 FLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPE 189
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G + ++ K
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 98/197 (49%), Gaps = 5/197 (2%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHIT-NEGNVETFVREVASSSHVRHPNLVA 370
E + + +G G G+V+ G +N+ VA+K + +V+ F+ E ++H LV
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVR 72
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-EIAIDSARGLWFLHSYSEG 429
L R + ++I E G+L ++L + + +L + + A G+ ++ +
Sbjct: 73 LYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-- 130
Query: 430 CIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVN 489
+HRD++ N+L+ + K++DFGL++VI+ E A + + PE +
Sbjct: 131 -YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 490 SSGDVYSFGIVLLQILS 506
DV+SFGI+L +I++
Sbjct: 190 IKSDVWSFGILLYEIVT 206
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 27/207 (13%)
Query: 320 IGEGITGKVYKGKLSNN--QHVAIKHIT----NEGNVETFVREVASSSHV---RHPNLVA 370
IGEG GKV+K + N + VA+K + EG + +REVA H+ HPN+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 371 LLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSA----RGLW 421
L C R + L++E + +L +L DK E D RGL
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL---DKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE 481
FLHS+ +VHRD+KP NIL+ + + KL+DFGL+++ A + V T Y PE
Sbjct: 135 FLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPE 189
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G + ++ K
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ FL S
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--- 212
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVI---DIGETYASSEVRGTFGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + + + + + ++ E K
Sbjct: 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 272
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 273 FTTKSDVWSFGVLLWELMT 291
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ FL S
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--- 151
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVI---DIGETYASSEVRGTFGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + + + + + ++ E K
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 211
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 212 FTTKSDVWSFGVLLWELMT 230
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHV 363
E E L + +G G G+V+ G + + VA+K + +G++ + F+ E +
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 74
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-EIAIDSARGLWF 422
+H LV L + + ++I E NG+L ++L I +L ++A A G+ F
Sbjct: 75 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 133
Query: 423 LHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
+ E +HRD++ NIL+ K++DFGL+++I+ E A + + PE
Sbjct: 134 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 190
Query: 483 RSNCKVNSSGDVYSFGIVLLQILS 506
+ DV+SFGI+L +I++
Sbjct: 191 INYGTFTIKSDVWSFGILLTEIVT 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHV 363
E E L + +G G G+V+ G + + VA+K + +G++ + F+ E +
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 65
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-EIAIDSARGLWF 422
+H LV L + + ++I E NG+L ++L I +L ++A A G+ F
Sbjct: 66 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 423 LHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
+ E +HRD++ NIL+ K++DFGL+++I+ E A + + PE
Sbjct: 125 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 181
Query: 483 RSNCKVNSSGDVYSFGIVLLQILS 506
+ DV+SFGI+L +I++
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ FL S
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--- 153
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVI---DIGETYASSEVRGTFGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + + + + + ++ E K
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 214 FTTKSDVWSFGVLLWELMT 232
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 26/231 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
E ++ IGEG G VYK + + VA+K I EG T +RE++ + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLWFL 423
N+V LL ++ +L++E + +L F L+ I I +GL F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKT--FMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
HS+ ++HRD+KP N+L+ KL+DFGL++ + + EV T Y PE
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEIL 174
Query: 484 SNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 175 LGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 215
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHV 363
E E L + +G G G+V+ G + + VA+K + +G++ + F+ E +
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 65
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-EIAIDSARGLWF 422
+H LV L + + ++I E NG+L ++L I +L ++A A G+ F
Sbjct: 66 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 423 LHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
+ E +HRD++ NIL+ K++DFGL+++I+ E A + + PE
Sbjct: 125 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 181
Query: 483 RSNCKVNSSGDVYSFGIVLLQILS 506
+ DV+SFGI+L +I++
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ FL S
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--- 154
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVI---DIGETYASSEVRGTFGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + + + + + ++ E K
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 215 FTTKSDVWSFGVLLWELMT 233
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHV 363
E E L + +G G G+V+ G + + VA+K + +G++ + F+ E +
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 66
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-EIAIDSARGLWF 422
+H LV L + + ++I E NG+L ++L I +L ++A A G+ F
Sbjct: 67 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 125
Query: 423 LHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
+ E +HRD++ NIL+ K++DFGL+++I+ E A + + PE
Sbjct: 126 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 182
Query: 483 RSNCKVNSSGDVYSFGIVLLQILS 506
+ DV+SFGI+L +I++
Sbjct: 183 INYGTFTIKSDVWSFGILLTEIVT 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHV 363
E E L + +G G G+V+ G + + VA+K + +G++ + F+ E +
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 67
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-EIAIDSARGLWF 422
+H LV L + + ++I E NG+L ++L I +L ++A A G+ F
Sbjct: 68 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 126
Query: 423 LHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
+ E +HRD++ NIL+ K++DFGL+++I+ E A + + PE
Sbjct: 127 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 183
Query: 483 RSNCKVNSSGDVYSFGIVLLQILS 506
+ DV+SFGI+L +I++
Sbjct: 184 INYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ FL S
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--- 154
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVI---DIGETYASSEVRGTFGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + + + + + ++ E K
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 215 FTTKSDVWSFGVLLWELMT 233
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ FL S
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--- 153
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVI---DIGETYASSEVRGTFGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + + + + + ++ E K
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 214 FTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ FL S
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--- 158
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVI---DIGETYASSEVRGTFGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + + + + + ++ E K
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 218
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 219 FTTKSDVWSFGVLLWELMT 237
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 26/231 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
E ++ IGEG G VYK + + VA+ I EG T +RE++ + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLWFL 423
N+V LL ++ +L++E + +L + F L+ I I +GL F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
HS+ ++HRD+KP N+L+ KL+DFGL++ + + EV T Y PE
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 484 SNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 176 LGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 216
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 26/231 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
E ++ IGEG G VYK + + VA+ I EG T +RE++ + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLWFL 423
N+V LL ++ +L++E + +L + F L+ I I +GL F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
HS+ ++HRD+KP N+L+ KL+DFGL++ + + EV T Y PE
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 484 SNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
CK S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 175 LGCKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 215
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 36/231 (15%)
Query: 309 YATEKLNELNLIGEGITGKVYKGKLSN------NQHVAIKHITNEGNVET---FVREVAS 359
Y + + IGEG G+V++ + VA+K + E + + F RE A
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103
Query: 360 SSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDK----------------- 402
+ +PN+V LLG C L++E G+L E+L
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 403 ------CLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGL 456
LS ++L IA A G+ +L SE VHRD+ N L+G N K++DFGL
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGL 220
Query: 457 SKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
S+ I + Y A ++ PE + + DV+++G+VL +I S
Sbjct: 221 SRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHV 363
E E L + +G G G+V+ G + + VA+K + +G++ + F+ E +
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 70
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-EIAIDSARGLWF 422
+H LV L + + ++I E NG+L ++L I +L ++A A G+ F
Sbjct: 71 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 129
Query: 423 LHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
+ E +HRD++ NIL+ K++DFGL+++I+ E A + + PE
Sbjct: 130 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 186
Query: 483 RSNCKVNSSGDVYSFGIVLLQILS 506
+ DV+SFGI+L +I++
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVT 210
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 16/217 (7%)
Query: 301 RYTIREVHYATEKLNELNLIGEGITGKVYKGKLS----NNQHVAIKHIT---NEGNVETF 353
R +E+ + K+ E+ IG G G+V +G+L VAIK + E F
Sbjct: 7 REFAKEIDVSYVKIEEV--IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREF 64
Query: 354 VREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA 413
+ E + HPN++ L G ++ E NG L +L D + IQ + +
Sbjct: 65 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML 124
Query: 414 IDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVID--IGETYASSEV 471
A G+ +L +E VHRD+ NIL+ N K+SDFGLS+ ++ + +S +
Sbjct: 125 RGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSL 181
Query: 472 RGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
G + PE + K S+ D +S+GIV+ +++S
Sbjct: 182 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 312 EKL-NELNLIGEGITGKVYKGK-LSNNQHVAIKHITNEGNV-----ETFVREVASSSHVR 364
EKL ++L IG G G VY + + N++ VAIK ++ G + ++EV +R
Sbjct: 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH 424
HPN + G LR +L+ E C G+ ++ L K L ++ + + +GL +LH
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 425 SYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY-- 482
S++ ++HRD+K NILL KL DFG + ++ + GT ++ PE
Sbjct: 133 SHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVIL 184
Query: 483 -RSNCKVNSSGDVYSFGIVLLQILSGKKAKVLTRAGSAL 520
+ + DV+S GI +++ K A SAL
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL 223
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 12/195 (6%)
Query: 320 IGEGITGKVYKG--KLSNNQ-HVAIKHI---TNEGNVETFVREVASSSHVRHPNLVALLG 373
+G G G V +G ++ Q VAIK + T + + E +RE + +P +V L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 374 YCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVH 433
C + + L+ E+ G L ++L GK + + E+ + G+ +L E VH
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL---EEKNFVH 459
Query: 434 RDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFG--YLDPEYRSNCKVNSS 491
R++ N+LL AK+SDFGLSK + ++Y ++ G + + PE + K +S
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 519
Query: 492 GDVYSFGIVLLQILS 506
DV+S+G+ + + LS
Sbjct: 520 SDVWSYGVTMWEALS 534
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHV 363
E E L + +G G G+V+ G + + VA+K + +G++ + F+ E +
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQL 65
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-EIAIDSARGLWF 422
+H LV L + + ++I E NG+L ++L I +L ++A A G+ F
Sbjct: 66 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 423 LHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
+ E +HRD++ NIL+ K++DFGL+++I+ E A + + PE
Sbjct: 125 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181
Query: 483 RSNCKVNSSGDVYSFGIVLLQILS 506
+ DV+SFGI+L +I++
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 17/216 (7%)
Query: 304 IREVHYATEKLNELNLIGEGITGKV----YKGKLSNN-QHVAIKHITNE--GN-VETFVR 355
+ H+ L + +GEG GKV Y + N + VA+K + E GN + +
Sbjct: 1 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKK 60
Query: 356 EVASSSHVRHPNLVALLGYCLRV--DECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA 413
E+ ++ H N+V G C + LI E P+G+L E+L ++ Q+L+ A
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 120
Query: 414 IDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGE---TYASSE 470
+ +G+ +L S VHRD+ N+L+ + K+ DFGL+K I+ + T
Sbjct: 121 VQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR 177
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
F Y PE K + DV+SFG+ L ++L+
Sbjct: 178 DSPVFWYA-PECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 8/198 (4%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLV 369
E L + +G G G+V+ G + + VA+K + +G++ + F+ E ++H LV
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 66
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-EIAIDSARGLWFLHSYSE 428
L + + ++I E NG+L ++L I +L ++A A G+ F+ E
Sbjct: 67 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---E 122
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKV 488
+HRD++ NIL+ K++DFGL+++I+ E A + + PE +
Sbjct: 123 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 182
Query: 489 NSSGDVYSFGIVLLQILS 506
DV+SFGI+L +I++
Sbjct: 183 TIKSDVWSFGILLTEIVT 200
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 22/203 (10%)
Query: 318 NLIGEGITGKVYKGKLSNNQHVAIKHITNE--GNVETFVREVASSSHVRHPNLVALLGYC 375
+++G G G + + +N+ VA+K I E + V+ + S HPN++ +C
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESD--EHPNVIRY--FC 85
Query: 376 LRVDECF--LIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVH 433
D F + ELC L E++ KD ++ + + + GL LHS + IVH
Sbjct: 86 TEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN---IVH 141
Query: 434 RDIKPTNILLG-PN----FEAKLSDFGLSKVIDIGETYAS--SEVRGTFGYLDPEYRS-N 485
RD+KP NIL+ PN +A +SDFGL K + +G S S V GT G++ PE S +
Sbjct: 142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201
Query: 486 CKVNS--SGDVYSFGIVLLQILS 506
CK N + D++S G V ++S
Sbjct: 202 CKENPTYTVDIFSAGCVFYYVIS 224
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 19/211 (9%)
Query: 310 ATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHI---TNEGNVETFVREVASSSHVRH 365
++ + +L +G G VYKG + +VA+K + + EG T +RE++ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQR-LEIAI------DSAR 418
N+V L ++ L++E N +L +++ + + R LE+ + +
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYM--DSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYL 478
GL F H E I+HRD+KP N+L+ + KL DFGL++ I SSEV T Y
Sbjct: 120 GLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYR 175
Query: 479 DPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
P+ + S+ D++S G +L ++++GK
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 114/253 (45%), Gaps = 34/253 (13%)
Query: 310 ATEKLNELNLIGEGITGK--VYKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHV 363
+ EK L IGEG GK + K Q+V IK I + E REVA +++
Sbjct: 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYV-IKEINISRMSSKEREESRREVAVLANM 80
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEW-------LFGKDKCLSWIQRLEIAIDS 416
+HPN+V +++ + C G+L + LF +D+ L W ++ +A
Sbjct: 81 KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA--- 137
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFG 476
L + I+HRDIK NI L + +L DFG+++V++ A + + GT
Sbjct: 138 ------LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI-GTPY 190
Query: 477 YLDPEYRSNCKVNSSGDVYSFGIVLLQILSGKKAKVLTRAGSALEL-------ADPKLDR 529
YL PE N N+ D+++ G VL ++ + K A AGS L + P +
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCTLKHA---FEAGSMKNLVLKIISGSFPPVSL 247
Query: 530 EYSIEAFDLTLQL 542
YS + L QL
Sbjct: 248 HYSYDLRSLVSQL 260
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 14/164 (8%)
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDEC------FLIYELCPNGNLAEWLFGKDKCLSW 406
F RE +++ + HP +VA+ Y E +++ E +G + + ++
Sbjct: 59 FRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEGPMTP 115
Query: 407 IQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI-DIGET 465
+ +E+ D+ + L F H + I+HRD+KP NI++ K+ DFG+++ I D G +
Sbjct: 116 KRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 466 YA-SSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
++ V GT YL PE V++ DVYS G VL ++L+G+
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLSNNQ----HVAIK---HITNEGNVETFVREVASSSHVRHPNLVAL 371
+IG G G VY G L +N H A+K IT+ G V F+ E HPN+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 372 LGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LG CLR + ++ +G+L ++ + + + + A+G+ +L S
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--- 152
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGT---FGYLDPEYRSNCK 487
VHRD+ N +L F K++DFGL++ + E + G ++ E K
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQK 212
Query: 488 VNSSGDVYSFGIVLLQILS 506
+ DV+SFG++L ++++
Sbjct: 213 FTTKSDVWSFGVLLWELMT 231
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 319 LIGEGITGKVYKGKLS----NNQHVAIKHITN---EGNVETFVREVASSSHVRHPNLVAL 371
+IG G G+V G L VAIK + + E F+ E + HPN++ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
G + +I E NG+L +L D + IQ + + A G+ +L ++
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNY 130
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFG--YLDPEYRSNCK 487
VHR + NIL+ N K+SDFGLS+ + D + +S + G + PE K
Sbjct: 131 VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 190
Query: 488 VNSSGDVYSFGIVLLQILS 506
S+ DV+S+GIV+ +++S
Sbjct: 191 FTSASDVWSYGIVMWEVMS 209
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 26/231 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
E ++ IGEG G VYK + + VA+K I EG T +RE++ + HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLWFL 423
N+V LL ++ +L++E + +L + F L+ I I +GL F
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
HS+ ++HRD+KP N+L+ KL+DFGL++ + + EV T Y PE
Sbjct: 127 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 182
Query: 484 SNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
K S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 183 LGXKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 223
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 26/231 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
E ++ IGEG G VYK + + VA+K I EG T +RE++ + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARGLWFL 423
N+V LL ++ +L++E + +L + F L+ I I +GL F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
HS+ ++HRD+KP N+L+ KL+DFGL++ + + EV T Y PE
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEIL 175
Query: 484 SNCKVNSSG-DVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSI 533
K S+ D++S G + A+++TR AL D ++D+ + I
Sbjct: 176 LGXKYYSTAVDIWSLGCIF--------AEMVTR--RALFPGDSEIDQLFRI 216
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
Query: 319 LIGEGITGKVYKGKLS-NNQHVAIKHITNEG---NVETFVREVASSSHVRHPNLVALLGY 374
+IG G T V + + VAIK I E +++ ++E+ + S HPN+V+
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 375 CLRVDECFLIYELCPNGNLAEWLFG-------KDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+ DE +L+ +L G++ + + K L I + GL +LH
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 141
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFG----YLDPEYR 483
+ +HRD+K NILLG + +++DFG+S + G ++VR TF ++ PE
Sbjct: 142 Q---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 198
Query: 484 SNCK-VNSSGDVYSFGIVLLQILSG 507
+ + D++SFGI +++ +G
Sbjct: 199 EQVRGYDFKADIWSFGITAIELATG 223
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 95/211 (45%), Gaps = 27/211 (12%)
Query: 320 IGEGITGKVYK------GKLSNNQHVAIKHITNEGNV---ETFVREVASSSHV-RHPNLV 369
+G G GKV + GK VA+K + + + E + E+ SH+ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDS------------- 416
LLG C +I E C G+L +L K + L IA +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTF 475
A+G+ FL S+ CI HRD+ N+LL AK+ DFGL++ I Y R
Sbjct: 174 AQGMAFLA--SKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE +C DV+S+GI+L +I S
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 95/211 (45%), Gaps = 27/211 (12%)
Query: 320 IGEGITGKVYK------GKLSNNQHVAIKHITNEGNV---ETFVREVASSSHV-RHPNLV 369
+G G GKV + GK VA+K + + + E + E+ SH+ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDS------------- 416
LLG C +I E C G+L +L K + L IA +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTF 475
A+G+ FL S + CI HRD+ N+LL AK+ DFGL++ I Y R
Sbjct: 174 AQGMAFLAS--KNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE +C DV+S+GI+L +I S
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 318 NLIGEGITGKVYKGKLS-NNQHVAIKHITNEG---NVETFVREVASSSHVRHPNLVALLG 373
+IG G T V + + VAIK I E +++ ++E+ + S HPN+V+
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 374 YCLRVDECFLIYELCPNGNLAEWLFG-------KDKCLSWIQRLEIAIDSARGLWFLHSY 426
+ DE +L+ +L G++ + + K L I + GL +LH
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 135
Query: 427 SEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFG----YLDPEY 482
+ +HRD+K NILLG + +++DFG+S + G ++VR TF ++ PE
Sbjct: 136 GQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 192
Query: 483 RSNCK-VNSSGDVYSFGIVLLQILSG 507
+ + D++SFGI +++ +G
Sbjct: 193 MEQVRGYDFKADIWSFGITAIELATG 218
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHITNEGNVETF----VREVASSSHVR 364
+ EK L L+GEG G V K + + VAIK + + +RE+ +R
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEW-LFGKDKCLSWIQRLEIAIDSARGLWFL 423
H NLV LL C + +L++E + L + LF +Q+ I G+ F
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI--INGIGFC 140
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRGTFGYLDPEY 482
HS++ I+HRDIKP NIL+ + KL DFG ++ + GE Y EV T Y PE
Sbjct: 141 HSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY-DDEV-ATRWYRAPEL 195
Query: 483 R-SNCKVNSSGDVYSFGIVLLQILSGK 508
+ K + DV++ G ++ ++ G+
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 14/164 (8%)
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDEC------FLIYELCPNGNLAEWLFGKDKCLSW 406
F RE +++ + HP +VA+ Y E +++ E +G + + ++
Sbjct: 59 FRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEGPMTP 115
Query: 407 IQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI-DIGET 465
+ +E+ D+ + L F H + I+HRD+KP NIL+ K+ DFG+++ I D G +
Sbjct: 116 KRAIEVIADACQALNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNS 172
Query: 466 YA-SSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
++ V GT YL PE V++ DVYS G VL ++L+G+
Sbjct: 173 VXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 314 LNELNLIGEGITGKVYKGKLS-NNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALL 372
E+ LIG G G+V+K K + + IK + + N E REV + + + H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV--KYNNEKAEREVKALAKLDHVNIVHYN 70
Query: 373 GYCLRVD---------------EC-FLIYELCPNGNLAEWLFGK-----DKCLSWIQRLE 411
G D +C F+ E C G L +W+ + DK L+ LE
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA----LE 126
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
+ +G+ ++HS +++RD+KP+NI L + K+ DFGL V +
Sbjct: 127 LFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGKRXRS 181
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
+GT Y+ PE S+ D+Y+ G++L ++L
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 8/198 (4%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV--ETFVREVASSSHVRHPNLV 369
E L + +G G G+V+ G + + VA+K + +G++ + F+ E ++H LV
Sbjct: 9 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 67
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-EIAIDSARGLWFLHSYSE 428
L + + ++I E NG+L ++L I +L ++A A G+ F+ E
Sbjct: 68 RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---E 123
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKV 488
+HR+++ NIL+ K++DFGL+++I+ E A + + PE +
Sbjct: 124 RNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 183
Query: 489 NSSGDVYSFGIVLLQILS 506
DV+SFGI+L +I++
Sbjct: 184 TIKSDVWSFGILLTEIVT 201
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 312 EKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
+K +L IGEG G V+K K ++ VA+K + +EG + +RE+ ++H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSY 426
N+V L + L++E C + +L ++ + L +GL F HS
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 427 SEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNC 486
+ ++HRD+KP N+L+ N E KL+DFGL++ I S+EV T Y P+
Sbjct: 121 N---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV-VTLWYRPPDVLFGA 176
Query: 487 KVNSSG-DVYSFGIVLLQILSGKKA 510
K+ S+ D++S G + ++ + +
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARP 201
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQH---VAIKHITNEGNVETFVREVASSSHVR---- 364
+K + ++IG G++ V + H V I +T E + EV ++
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 365 -----HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARG 419
HP+++ L+ FL+++L G L ++L K LS + I
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEA 212
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
+ FLH+ + IVHRD+KP NILL N + +LSDFG S ++ GE E+ GT GYL
Sbjct: 213 VSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL--RELCGTPGYLA 267
Query: 480 PEYRSNCKVNSSG-------DVYSFGIVLLQILSG 507
PE C ++ + D+++ G++L +L+G
Sbjct: 268 PEI-LKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 98/197 (49%), Gaps = 5/197 (2%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHIT-NEGNVETFVREVASSSHVRHPNLVA 370
E + + +G G G+V+ G +N+ VA+K + +V+ F+ E ++H LV
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVR 71
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-EIAIDSARGLWFLHSYSEG 429
L + + ++I E G+L ++L + + +L + + A G+ ++ +
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-- 129
Query: 430 CIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVN 489
+HRD++ N+L+ + K++DFGL++VI+ E A + + PE +
Sbjct: 130 -YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 188
Query: 490 SSGDVYSFGIVLLQILS 506
+V+SFGI+L +I++
Sbjct: 189 IKSNVWSFGILLYEIVT 205
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 14/164 (8%)
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDEC------FLIYELCPNGNLAEWLFGKDKCLSW 406
F RE +++ + HP +VA+ Y E +++ E +G + + ++
Sbjct: 59 FRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEGPMTP 115
Query: 407 IQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI-DIGET 465
+ +E+ D+ + L F H + I+HRD+KP NI++ K+ DFG+++ I D G +
Sbjct: 116 KRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 466 YA-SSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
++ V GT YL PE V++ DVYS G VL ++L+G+
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 14/164 (8%)
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDEC------FLIYELCPNGNLAEWLFGKDKCLSW 406
F RE +++ + HP +VA+ Y E +++ E +G + + ++
Sbjct: 59 FRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEGPMTP 115
Query: 407 IQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI-DIGET 465
+ +E+ D+ + L F H + I+HRD+KP NI++ K+ DFG+++ I D G +
Sbjct: 116 KRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 466 YA-SSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
++ V GT YL PE V++ DVYS G VL ++L+G+
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 14/164 (8%)
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDEC------FLIYELCPNGNLAEWLFGKDKCLSW 406
F RE +++ + HP +VA+ Y E +++ E +G + + ++
Sbjct: 59 FRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEGPMTP 115
Query: 407 IQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI-DIGET 465
+ +E+ D+ + L F H + I+HRD+KP NI++ K+ DFG+++ I D G +
Sbjct: 116 KRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 466 YA-SSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
++ V GT YL PE V++ DVYS G VL ++L+G+
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G G G+V+ + + VA+K + +VE F+ E ++H LV L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK- 81
Query: 379 DECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-EIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++I E G+L ++L + + +L + + A G+ F+ + +HRD++
Sbjct: 82 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLR 138
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
NIL+ + K++DFGL++VI+ E A + + PE + DV+SF
Sbjct: 139 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 198
Query: 498 GIVLLQILS 506
GI+L++I++
Sbjct: 199 GILLMEIVT 207
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHIT---NEGNVETFVREVASSSHVRHPNLVALLGYCL 376
+G+G GKVYK K +A + +E +E ++ E+ + HP +V LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 377 RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
+ +++ E CP G + + D+ L+ Q + L FLHS I+HRD+
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDL 135
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY-----RSNCKVNSS 491
K N+L+ + +L+DFG+S ++ GT ++ PE + +
Sbjct: 136 KAGNVLMTLEGDIRLADFGVS-AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYK 194
Query: 492 GDVYSFGIVLLQI 504
D++S GI L+++
Sbjct: 195 ADIWSLGITLIEM 207
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHIT---NEGNVETFVREVASSSHVRHPNLVALLGYCL 376
+G+G GKVYK K +A + +E +E ++ E+ + HP +V LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 377 RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
+ +++ E CP G + + D+ L+ Q + L FLHS I+HRD+
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDL 143
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY-----RSNCKVNSS 491
K N+L+ + +L+DFG+S ++ GT ++ PE + +
Sbjct: 144 KAGNVLMTLEGDIRLADFGVS-AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYK 202
Query: 492 GDVYSFGIVLLQI 504
D++S GI L+++
Sbjct: 203 ADIWSLGITLIEM 215
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G G G+V+ + + VA+K + +VE F+ E ++H LV L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK- 254
Query: 379 DECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-EIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++I E G+L ++L + + +L + + A G+ F+ + +HRD++
Sbjct: 255 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLR 311
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
NIL+ + K++DFGL++VI+ E A + + PE + DV+SF
Sbjct: 312 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 371
Query: 498 GIVLLQILS 506
GI+L++I++
Sbjct: 372 GILLMEIVT 380
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHIT----NEGNVETFVREVASSSHVR 364
AT + + IG G G VYK + ++ H VA+K + EG + VREVA +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 365 ---HPNLVALLGYCL--RVD---ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDS 416
HPN+V L+ C R D + L++E + +L +L DK E D
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL---DKAPPPGLPAETIKDL 117
Query: 417 AR----GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
R GL FLH+ CIVHRD+KP NIL+ KL+DFGL+++ A V
Sbjct: 118 MRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV- 173
Query: 473 GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G + ++ K
Sbjct: 174 -TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 14/164 (8%)
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDEC------FLIYELCPNGNLAEWLFGKDKCLSW 406
F RE +++ + HP +VA+ Y E +++ E +G + + ++
Sbjct: 76 FRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYV-DGVTLRDIVHTEGPMTP 132
Query: 407 IQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI-DIGET 465
+ +E+ D+ + L F H + I+HRD+KP NI++ K+ DFG+++ I D G +
Sbjct: 133 KRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 189
Query: 466 YA-SSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
++ V GT YL PE V++ DVYS G VL ++L+G+
Sbjct: 190 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 37/269 (13%)
Query: 317 LNLIGEGITGKVYKGK-LSNNQHVAIKHITNEGNVETFVREVAS--SSHVRHPNLVALLG 373
+ L+G G G+VYKG+ + Q AIK + G+ E +++ + + H N+ G
Sbjct: 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYG 88
Query: 374 YCLRV------DECFLIYELCPNGNLAEWLFG------KDKCLSWIQRLEIAIDSARGLW 421
++ D+ +L+ E C G++ + + K++ +++I R + RGL
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICR-----EILRGLS 143
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE 481
LH + ++HRDIK N+LL N E KL DFG+S +D ++ + GT ++ PE
Sbjct: 144 HLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPE 199
Query: 482 Y-----RSNCKVNSSGDVYSFGIVLLQILSGKKAKVLTRAGSALEL----ADPKLDREYS 532
+ + D++S GI +++ G AL L P+L +
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW 259
Query: 533 IEAFDLTLQLALSCTALTH-QRPPMEQVF 560
+ F ++ SC H QRP EQ+
Sbjct: 260 SKKFQSFIE---SCLVKNHSQRPATEQLM 285
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 320 IGEGITGKVYK------GKLSNNQHVAIKHITNEGNV---ETFVREVASSSHV-RHPNLV 369
+G G GKV + GK VA+K + + + E + E+ SH+ +H N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGK---------DKCLSWIQRLEIAIDSARGL 420
LLG C +I E C G+L +L K + L L + A+G+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLD 479
FL S + CI HRD+ N+LL AK+ DFGL++ I Y R ++
Sbjct: 166 AFLAS--KNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILS 506
PE +C DV+S+GI+L +I S
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 346 NEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLS 405
+E TF++EV + HPN++ +G + I E G L + D
Sbjct: 47 DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP 106
Query: 406 WIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET 465
W QR+ A D A G+ +LHS + I+HRD+ N L+ N ++DFGL++++ +T
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163
Query: 466 YASS-------------EVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
V G ++ PE + + DV+SFGIVL +I+
Sbjct: 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 320 IGEGITGKVYK------GKLSNNQHVAIKHITNEGNV---ETFVREVASSSHV-RHPNLV 369
+G G GKV + GK VA+K + + + E + E+ SH+ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGK---------DKCLSWIQRLEIAIDSARGL 420
LLG C +I E C G+L +L K + L L + A+G+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLD 479
FL S + CI HRD+ N+LL AK+ DFGL++ I Y R ++
Sbjct: 174 AFLAS--KNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILS 506
PE +C DV+S+GI+L +I S
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNN-QHVAIKHITNEGNVETF----VREVASSSHVRHP 366
EK ++ IGEG G V+K + + Q VAIK + +RE+ ++HP
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQR-------LEIAIDSARG 419
NLV LL R L++E C + L E L QR I + +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHE--------LDRYQRGVPEHLVKSITWQTLQA 114
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
+ F H ++ CI HRD+KP NIL+ + KL DFG ++++ Y EV T Y
Sbjct: 115 VNFCHKHN--CI-HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRS 170
Query: 480 PEYR-SNCKVNSSGDVYSFGIVLLQILSG 507
PE + + DV++ G V ++LSG
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHITNE-----GNVETFVREVASSSH 362
+L + ++G G G VYKG VAIK I NE NVE F+ E +
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIK-ILNETTGPKANVE-FMDEALIMAS 96
Query: 363 VRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDS 416
+ HP+LV LLG CL L+ +L P+G L E++ G L+W +
Sbjct: 97 MDHPHLVRLLGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQI 149
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTF 475
A+G+ +L E +VHRD+ N+L+ K++DFGL+++++ E Y + +
Sbjct: 150 AKGMMYL---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI 206
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ E K DV+S+G+ + ++++
Sbjct: 207 KWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E REV+ ++HPN++ L + LI EL G L ++L K+ L+ +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETY 466
E G+++LHS I H D+KP NI+L P K+ DFGL+ ID G +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ + GT ++ PE + + D++S G++ +LSG
Sbjct: 175 KN--IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 42/230 (18%)
Query: 313 KLNELNL--------IGEGITGKVYKGKL------SNNQHVAIKHITN--EGNV-ETFVR 355
KL E++L +GE GKVYKG L Q VAIK + + EG + E F
Sbjct: 19 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 78
Query: 356 EVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDK------------- 402
E + ++HPN+V LLG + +I+ C +G+L E+L +
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138
Query: 403 --CLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
L + + A G+ +L S+ +VH+D+ N+L+ K+SD GL + +
Sbjct: 139 KSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREV 195
Query: 461 DIGETYASSEVRGT----FGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ Y ++ G ++ PE K + D++S+G+VL ++ S
Sbjct: 196 YAADYY---KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHITNE-----GNVETFVREVASSSH 362
+L + ++G G G VYKG VAIK I NE NVE F+ E +
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIK-ILNETTGPKANVE-FMDEALIMAS 73
Query: 363 VRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDS 416
+ HP+LV LLG CL L+ +L P+G L E++ G L+W +
Sbjct: 74 MDHPHLVRLLGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQI 126
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTF 475
A+G+ +L E +VHRD+ N+L+ K++DFGL+++++ E Y + +
Sbjct: 127 AKGMMYL---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI 183
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ E K DV+S+G+ + ++++
Sbjct: 184 KWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 309 YATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIKHITNE-----GNVETFVREVASSSH 362
Y+ + L +G G G+V+ + +N ++ A+K + E VE E S
Sbjct: 3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI 62
Query: 363 VRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWF 422
V HP ++ + G + F+I + G L L + + + + A + L +
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEY 121
Query: 423 LHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI-DIGETYASSEVRGTFGYLDPE 481
LHS I++RD+KP NILL N K++DFG +K + D+ TY + GT Y+ PE
Sbjct: 122 LHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--TYX---LCGTPDYIAPE 173
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSG 507
S N S D +SFGI++ ++L+G
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHIT----NEGNVETFVREVASSSHVR 364
AT + + IG G G VYK + ++ H VA+K + EG + VREVA +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 365 ---HPNLVALLGYCL--RVD---ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDS 416
HPN+V L+ C R D + L++E + +L +L DK E D
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL---DKAPPPGLPAETIKDL 117
Query: 417 AR----GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
R GL FLH+ CIVHRD+KP NIL+ KL+DFGL+++ A V
Sbjct: 118 MRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALDPVV 172
Query: 473 GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G + ++ K
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 51/240 (21%)
Query: 306 EVHYATEK-----LNELNLIGEGITGKVYKGKLS-NNQHVAIKHITNEGNVETFVREVAS 359
E Y +K E+ LIG G G+V+K K + + I+ + + N E REV +
Sbjct: 1 ETKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRV--KYNNEKAEREVKA 58
Query: 360 SSHVRHPNLVALLGYCLRVD----------------------------EC-FLIYELCPN 390
+ + H N+V G D +C F+ E C
Sbjct: 59 LAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 391 GNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGP 445
G L +W+ + DK L+ LE+ +G+ ++HS ++HRD+KP+NI L
Sbjct: 119 GTLEQWIEKRRGEKLDKVLA----LELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVD 171
Query: 446 NFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
+ K+ DFGL V + + +GT Y+ PE S+ D+Y+ G++L ++L
Sbjct: 172 TKQVKIGDFGL--VTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 24/211 (11%)
Query: 320 IGEGITGKVYKGKLSN------NQHVAIKHITNEGN--VETFVREVASSSHVRHPNLVAL 371
+GEG GKV+ + N VA+K + + + + F RE ++++H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWL--FGKDKCL----------SWIQRLEIAIDSARG 419
G C+ D +++E +G+L ++L G D L + Q L IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYL 478
+ +L S VHRD+ N L+G N K+ DFG+S+ + + Y ++
Sbjct: 141 MVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 479 DPEYRSNCKVNSSGDVYSFGIVLLQILSGKK 509
PE K + DV+S G+VL +I + K
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E REV+ ++HPN++ L + LI EL G L ++L K+ L+ +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETY 466
E G+++LHS I H D+KP NI+L P K+ DFGL+ ID G +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ + GT ++ PE + + D++S G++ +LSG
Sbjct: 175 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E REV+ ++HPN++ L + LI EL G L ++L K+ L+ +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETY 466
E G+++LHS I H D+KP NI+L P K+ DFGL+ ID G +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ + GT ++ PE + + D++S G++ +LSG
Sbjct: 175 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 42/230 (18%)
Query: 313 KLNELNL--------IGEGITGKVYKGKL------SNNQHVAIKHITN--EGNV-ETFVR 355
KL E++L +GE GKVYKG L Q VAIK + + EG + E F
Sbjct: 2 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 356 EVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKD-------------- 401
E + ++HPN+V LLG + +I+ C +G+L E+L +
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 402 -KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
L + + A G+ +L S+ +VH+D+ N+L+ K+SD GL + +
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 461 DIGETYASSEVRGT----FGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ Y ++ G ++ PE K + D++S+G+VL ++ S
Sbjct: 179 YAADYY---KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 372 LGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
+C + DE + NG L +++ R A + L +LH
Sbjct: 103 Y-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG--- 157
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVN 489
I+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 158 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 217
Query: 490 SSGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 218 KSSDLWALGCIIYQLVAG 235
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E REV+ ++HPN++ L + LI EL G L ++L K+ L+ +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETY 466
E G+++LHS I H D+KP NI+L P K+ DFGL+ ID G +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ + GT ++ PE + + D++S G++ +LSG
Sbjct: 175 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E REV+ ++HPN++ L + LI EL G L ++L K+ L+ +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 116
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETY 466
E G+++LHS I H D+KP NI+L P K+ DFGL+ ID G +
Sbjct: 117 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 173
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ + GT ++ PE + + D++S G++ +LSG
Sbjct: 174 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV-----ETFVREVASSSHVRHPNLVAL 371
L IG G G+ K + ++ + + + G++ + V EV ++HPN+V
Sbjct: 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 372 LGYCLRVDEC----FLIYELCPNGNLAEWLFGKDKCLSWIQR---LEIAIDSARGLWFLH 424
Y +D +++ E C G+LA + K ++ L + L H
Sbjct: 71 --YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 425 SYSEG--CIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
S+G ++HRD+KP N+ L KL DFGL+++++ E +A E GT Y+ PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA-KEFVGTPYYMSPEQ 187
Query: 483 RSNCKVNSSGDVYSFGIVLLQI 504
+ N D++S G +L ++
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E REV+ ++HPN++ L + LI EL G L ++L K+ L+ +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETY 466
E G+++LHS I H D+KP NI+L P K+ DFGL+ ID G +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ + GT ++ PE + + D++S G++ +LSG
Sbjct: 175 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E REV+ ++HPN++ L + LI EL G L ++L K+ L+ +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETY 466
E G+++LHS I H D+KP NI+L P K+ DFGL+ ID G +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ + GT ++ PE + + D++S G++ +LSG
Sbjct: 175 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 334 SNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNL 393
SNN ++IK + F E+ + +++ + G DE ++IYE N ++
Sbjct: 76 SNNDKISIK-----SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI 130
Query: 394 A---EWLFGKDK---CLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNF 447
E+ F DK C IQ ++ I S F + ++E I HRD+KP+NIL+ N
Sbjct: 131 LKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLN-SFSYIHNEKNICHRDVKPSNILMDKNG 189
Query: 448 EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSG--DVYSFGIVL 501
KLSDFG S+ + + S RGT+ ++ PE+ SN + D++S GI L
Sbjct: 190 RVKLSDFGESEYMVDKKIKGS---RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E REV+ ++HPN++ L + LI EL G L ++L K+ L+ +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 116
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETY 466
E G+++LHS I H D+KP NI+L P K+ DFGL+ ID G +
Sbjct: 117 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 173
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ + GT ++ PE + + D++S G++ +LSG
Sbjct: 174 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E REV+ ++HPN++ L + LI EL G L ++L K+ L+ +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETY 466
E G+++LHS I H D+KP NI+L P K+ DFGL+ ID G +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ + GT ++ PE + + D++S G++ +LSG
Sbjct: 175 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E REV+ ++HPN++ L + LI EL G L ++L K+ L+ +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETY 466
E G+++LHS I H D+KP NI+L P K+ DFGL+ ID G +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ + GT ++ PE + + D++S G++ +LSG
Sbjct: 175 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E REV+ ++HPN++ L + LI EL G L ++L K+ L+ +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETY 466
E G+++LHS I H D+KP NI+L P K+ DFGL+ ID G +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ + GT ++ PE + + D++S G++ +LSG
Sbjct: 175 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E REV+ ++HPN++ L + LI EL G L ++L K+ L+ +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETY 466
E G+++LHS I H D+KP NI+L P K+ DFGL+ ID G +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ + GT ++ PE + + D++S G++ +LSG
Sbjct: 175 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E REV+ ++HPN++ L + LI EL G L ++L K+ L+ +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETY 466
E G+++LHS I H D+KP NI+L P K+ DFGL+ ID G +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ + GT ++ PE + + D++S G++ +LSG
Sbjct: 175 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHIT----NEGNVETFVREVASSSHVR 364
AT + + IG G G VYK + ++ H VA+K + EG + VREVA +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 365 ---HPNLVALLGYCL--RVD---ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDS 416
HPN+V L+ C R D + L++E + +L +L DK E D
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL---DKAPPPGLPAETIKDL 117
Query: 417 AR----GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
R GL FLH+ CIVHRD+KP NIL+ KL+DFGL+++ A V
Sbjct: 118 MRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALFPVV 172
Query: 473 GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G + ++ K
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 320 IGEGITGKVYK------GKLSNNQHVAIKHITNEGNV---ETFVREVASSSHV-RHPNLV 369
+G G GKV + GK VA+K + + + E + E+ SH+ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGK---------------DKCLSWIQRLEIAI 414
LLG C +I E C G+L +L K ++ LS L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 415 DSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRG 473
A+G+ FL S + CI HRD+ N+LL AK+ DFGL++ I Y R
Sbjct: 174 QVAQGMAFLAS--KNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 474 TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE +C DV+S+GI+L +I S
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 312 EKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHP 366
+K +L IGEG G V+K K ++ VA+K + +EG + +RE+ ++H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSY 426
N+V L + L++E C + +L ++ + L +GL F HS
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 427 SEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNC 486
+ ++HRD+KP N+L+ N E KL++FGL++ I S+EV T Y P+
Sbjct: 121 N---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV-VTLWYRPPDVLFGA 176
Query: 487 KVNSSG-DVYSFGIVLLQI 504
K+ S+ D++S G + ++
Sbjct: 177 KLYSTSIDMWSAGCIFAEL 195
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E REV+ ++HPN++ L + LI EL G L ++L K+ L+ +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE-SLTEEEAT 117
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETY 466
E G+++LHS I H D+KP NI+L P K+ DFGL+ ID G +
Sbjct: 118 EFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ + GT ++ PE + + D++S G++ +LSG
Sbjct: 175 KN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV-----ETFVREVASSSHVRHPNLVAL 371
L IG G G+ K + ++ + + + G++ + V EV ++HPN+V
Sbjct: 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 372 LGYCLRVDEC----FLIYELCPNGNLAEWLFGKDKCLSWIQR---LEIAIDSARGLWFLH 424
Y +D +++ E C G+LA + K ++ L + L H
Sbjct: 71 --YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 425 SYSEG--CIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
S+G ++HRD+KP N+ L KL DFGL+++++ ++A + V GT Y+ PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQ 187
Query: 483 RSNCKVNSSGDVYSFGIVLLQI 504
+ N D++S G +L ++
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV-----ETFVREVASSSHVRHPNLVAL 371
L IG G G+ K + ++ + + + G++ + V EV ++HPN+V
Sbjct: 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 372 LGYCLRVDEC----FLIYELCPNGNLAEWLFGKDKCLSWIQR---LEIAIDSARGLWFLH 424
Y +D +++ E C G+LA + K ++ L + L H
Sbjct: 71 --YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 425 SYSEG--CIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
S+G ++HRD+KP N+ L KL DFGL+++++ ++A + V GT Y+ PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPYYMSPEQ 187
Query: 483 RSNCKVNSSGDVYSFGIVLLQI 504
+ N D++S G +L ++
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 111/236 (47%), Gaps = 19/236 (8%)
Query: 319 LIGEGITGKVYKGKLSN-NQHVAIKHITNE-----GNVE-TFVREVASSSHVRHPNLVAL 371
++G+G GKV+ + NQ AIK + + +VE T V + S HP L +
Sbjct: 25 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 84
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSW-IQRLEI-AIDSARGLWFLHSYSEG 429
+ F + E G+L ++ C + + R A + GL FLHS
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG-- 139
Query: 430 CIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVN 489
IV+RD+K NILL + K++DFG+ K +G+ ++E GT Y+ PE K N
Sbjct: 140 -IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA-KTNEFCGTPDYIAPEILLGQKYN 197
Query: 490 SSGDVYSFGIVLLQILSGK---KAKVLTRAGSALELADPKLDREYSIEAFDLTLQL 542
S D +SFG++L ++L G+ + ++ + +P R EA DL ++L
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKL 253
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 320 IGEGITGKVYKGKLSN------NQHVAIKHITNE--GNVETFVREVASSSHVRHPNLVAL 371
+GEG GKV+ + N VA+K + + + F RE ++++H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWL--FGKDKC-------------LSWIQRLEIAIDS 416
G C D +++E +G+L ++L G D L Q L IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTF 475
A G+ +L S VHRD+ N L+G N K+ DFG+S+ + + Y
Sbjct: 143 ASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE K + DV+SFG++L +I +
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 29/205 (14%)
Query: 318 NLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETF------VREVASSSHVRHPNLVAL 371
+ +G G GKV GK H I N + + RE+ + RHP+++ L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
+ F++ E G L +++ K+ L + + G+ + H + +
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRH---MV 137
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGE---------TYASSEVRGTFGYLDPEY 482
VHRD+KP N+LL + AK++DFGLS ++ GE YA+ EV Y PE
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEV 197
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSG 507
D++S G++L +L G
Sbjct: 198 ----------DIWSSGVILYALLCG 212
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 99/231 (42%), Gaps = 25/231 (10%)
Query: 288 SFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIK---- 342
S + V G P R H+ + +G+G G VY + + VA+K
Sbjct: 1 SMQKVMENSSGTPDILTR--HFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFK 58
Query: 343 -HITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKD 401
I EG RE+ +H+ HPN++ L Y +LI E P G L + L +
Sbjct: 59 SQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL--QK 116
Query: 402 KCLSWIQRLEIAIDS-ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
C QR ++ A L + H ++HRDIKP N+LLG E K++DFG S
Sbjct: 117 SCTFDEQRTATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWS--- 170
Query: 461 DIGETYASSEVR----GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+A S R GT YL PE N D++ G++ ++L G
Sbjct: 171 ----VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGKLSN-NQHVAIKHI-------TNEGNVETFVREV 357
+V ++ +L+ +GEG VYK + N NQ VAIK I +G T +RE+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 358 ASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSA 417
+ HPN++ LL L+++ +L + L+ + +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTL 122
Query: 418 RGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGY 477
+GL +LH + I+HRD+KP N+LL N KL+DFGL+K +V T Y
Sbjct: 123 QGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWY 178
Query: 478 LDPEYRSNCKVNSSG-DVYSFGIVLLQIL 505
PE ++ G D+++ G +L ++L
Sbjct: 179 RAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 14/212 (6%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNEGN--VETFVREVASSSH 362
E Y ++ + ++G+G G VY G+ LSN +AIK I + + E+A H
Sbjct: 16 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 75
Query: 363 VRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR---G 419
++H N+V LG + E P G+L+ L K L ++ I + + G
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT-IGFYTKQILEG 134
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGP-NFEAKLSDFGLSKVIDIGETYASSEVRGTFGYL 478
L +LH + IVHRDIK N+L+ + K+SDFG SK + G + GT Y+
Sbjct: 135 LKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYM 190
Query: 479 DPEY--RSNCKVNSSGDVYSFGIVLLQILSGK 508
PE + + D++S G ++++ +GK
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 87/198 (43%), Gaps = 22/198 (11%)
Query: 320 IGEGITGKVYKGKLSNNQH-VAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G G T VY+ K Q A+K + + + E+ + HPN++ L
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETP 120
Query: 379 DECFLIYELCPNGNLAEWLFGK------DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIV 432
E L+ EL G L + + K D + Q LE + +LH E IV
Sbjct: 121 TEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILE-------AVAYLH---ENGIV 170
Query: 433 HRDIKPTNILLG---PNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVN 489
HRD+KP N+L P+ K++DFGLSK+++ V GT GY PE C
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVE--HQVLMKTVCGTPGYCAPEILRGCAYG 228
Query: 490 SSGDVYSFGIVLLQILSG 507
D++S GI+ +L G
Sbjct: 229 PEVDMWSVGIITYILLCG 246
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 344 ITNEGNVETFVREVASSSHVRHPNLVALLGYC--LRVDECFLIYELCPNGNLAEWLFGKD 401
I G +E +E+A + HPN+V L+ D ++++EL G + E
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME--VPTL 131
Query: 402 KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVID 461
K LS Q D +G+ +LH I+HRDIKP+N+L+G + K++DFG+S
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 462 IGETYASSEVRGTFGYLDPEYRSNCKVNSSG---DVYSFGIVL 501
+ S+ V GT ++ PE S + SG DV++ G+ L
Sbjct: 189 GSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 7/194 (3%)
Query: 316 ELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYC 375
EL G+ +V + NN +E + ET +E+ + S +RHP LV L
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 376 LRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRD 435
+E +IYE G L E + + +S + +E +GL +H E VH D
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLD 280
Query: 436 IKPTNILLGP--NFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGD 493
+KP NI+ + E KL DFGL+ +D ++ + GT + PE V D
Sbjct: 281 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVGYYTD 338
Query: 494 VYSFGIVLLQILSG 507
++S G++ +LSG
Sbjct: 339 MWSVGVLSYILLSG 352
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 33/222 (14%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVRE--VASSSHVRHPNLV 369
+ L L LIG G G VYKG L + + VA+K + + N + F+ E + + H N+
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVK-VFSFANRQNFINEKNIYRVPLMEHDNIA 70
Query: 370 ALLGYCLRVD-----ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH 424
+ RV E L+ E PNG+L ++L W+ +A RGL +LH
Sbjct: 71 RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVTRGLAYLH 128
Query: 425 S------YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLS------KVIDIGE--TYASSE 470
+ + + I HRD+ N+L+ + +SDFGLS +++ GE A SE
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 471 VRGTFGYLDPEYRS---NCKVNSSG----DVYSFGIVLLQIL 505
V GT Y+ PE N + S D+Y+ G++ +I
Sbjct: 189 V-GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 7/194 (3%)
Query: 316 ELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYC 375
EL G+ +V + NN +E + ET +E+ + S +RHP LV L
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 376 LRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRD 435
+E +IYE G L E + + +S + +E +GL +H E VH D
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLD 174
Query: 436 IKPTNILLGP--NFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGD 493
+KP NI+ + E KL DFGL+ +D ++ + GT + PE V D
Sbjct: 175 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVGYYTD 232
Query: 494 VYSFGIVLLQILSG 507
++S G++ +LSG
Sbjct: 233 MWSVGVLSYILLSG 246
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 86/187 (45%), Gaps = 23/187 (12%)
Query: 337 QHVAIKHITNE---GNVETFVREVASSSHVRHPNLVAL------LGYCLRVDECFLIYEL 387
+ VAIK E N E + E+ + HPN+V+ L D L E
Sbjct: 40 EQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 99
Query: 388 CPNGNLAEWLFGKDKCLSW----IQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL 443
C G+L ++L + C I+ L I SA L +LH E I+HRD+KP NI+L
Sbjct: 100 CEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA--LRYLH---ENRIIHRDLKPENIVL 154
Query: 444 GPNFEA---KLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIV 500
P + K+ D G +K +D GE +E GT YL PE K + D +SFG +
Sbjct: 155 QPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTL 212
Query: 501 LLQILSG 507
+ ++G
Sbjct: 213 AFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 86/187 (45%), Gaps = 23/187 (12%)
Query: 337 QHVAIKHITNE---GNVETFVREVASSSHVRHPNLVAL------LGYCLRVDECFLIYEL 387
+ VAIK E N E + E+ + HPN+V+ L D L E
Sbjct: 41 EQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 100
Query: 388 CPNGNLAEWLFGKDKCLSW----IQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL 443
C G+L ++L + C I+ L I SA L +LH E I+HRD+KP NI+L
Sbjct: 101 CEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA--LRYLH---ENRIIHRDLKPENIVL 155
Query: 444 GPNFEA---KLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIV 500
P + K+ D G +K +D GE +E GT YL PE K + D +SFG +
Sbjct: 156 QPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTL 213
Query: 501 LLQILSG 507
+ ++G
Sbjct: 214 AFECITG 220
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 14/212 (6%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNEGN--VETFVREVASSSH 362
E Y ++ + ++G+G G VY G+ LSN +AIK I + + E+A H
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 61
Query: 363 VRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR---G 419
++H N+V LG + E P G+L+ L K L ++ I + + G
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT-IGFYTKQILEG 120
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGP-NFEAKLSDFGLSKVIDIGETYASSEVRGTFGYL 478
L +LH + IVHRDIK N+L+ + K+SDFG SK + G + GT Y+
Sbjct: 121 LKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYM 176
Query: 479 DPEY--RSNCKVNSSGDVYSFGIVLLQILSGK 508
PE + + D++S G ++++ +GK
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 32/211 (15%)
Query: 320 IGEGITGKVYKGKLSNNQH------VAIK---HITNEGNVETFVREVASSSHVRHPNLVA 370
+G G G+VY+G++S + VA+K + +E + F+ E S + H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLF------GKDKCLSWIQRLEIAIDSARGLWFLH 424
+G L+ F++ EL G+L +L + L+ + L +A D A G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 425 SYSEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRG------TF 475
E +HRDI N LL GP AK+ DFG+++ I Y +S R
Sbjct: 159 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-----YRASYYRKGGCAMLPV 210
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE S D +SFG++L +I S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLRVDECFL 383
TGK Y K + ++ + G + E REV +RHPN++ L + L
Sbjct: 36 TGKEYAAKFIKKRRLSS---SRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 92
Query: 384 IYELCPNGNLAEWLFGKDKCL--SWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNI 441
I EL G L ++L K+ Q L+ +D G+ +LHS I H D+KP NI
Sbjct: 93 ILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVHYLHSKR---IAHFDLKPENI 146
Query: 442 LL----GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
+L PN KL DFG++ I+ G + + + GT ++ PE + + D++S
Sbjct: 147 MLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSI 204
Query: 498 GIVLLQILSG 507
G++ +LSG
Sbjct: 205 GVITYILLSG 214
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 32/211 (15%)
Query: 320 IGEGITGKVYKGKLSNNQH------VAIK---HITNEGNVETFVREVASSSHVRHPNLVA 370
+G G G+VY+G++S + VA+K + +E + F+ E S + H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLF------GKDKCLSWIQRLEIAIDSARGLWFLH 424
+G L+ F++ EL G+L +L + L+ + L +A D A G +L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 425 SYSEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRG------TF 475
E +HRDI N LL GP AK+ DFG+++ I Y +S R
Sbjct: 173 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-----YRASYYRKGGCAMLPV 224
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE S D +SFG++L +I S
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 372 LGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
+ + DE + NG L +++ R A + L +LH
Sbjct: 98 Y-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG--- 152
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVN 489
I+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAX 212
Query: 490 SSGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEG-NVETFVREVASSSHVRHPNLVALLGYCLRVDECFL 383
TGK Y K + ++ + G + E REV +RHPN++ L + L
Sbjct: 29 TGKEYAAKFIKKRRLSS---SRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85
Query: 384 IYELCPNGNLAEWLFGKDKCL--SWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNI 441
I EL G L ++L K+ Q L+ +D G+ +LHS I H D+KP NI
Sbjct: 86 ILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVHYLHSKR---IAHFDLKPENI 139
Query: 442 LL----GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
+L PN KL DFG++ I+ G + + + GT ++ PE + + D++S
Sbjct: 140 MLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSI 197
Query: 498 GIVLLQILSG 507
G++ +LSG
Sbjct: 198 GVITYILLSG 207
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 372 LGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
+ + DE + NG L +++ R A + L +LH
Sbjct: 96 Y-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG--- 150
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVN 489
I+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 490 SSGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 110/220 (50%), Gaps = 25/220 (11%)
Query: 307 VHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIK--HITNEGNVETFVREVASSSHVR 364
+++ + L L + G G V+K +L N ++VA+K I ++ + + EV S ++
Sbjct: 19 LYFQSMPLQLLEVKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY-EVYSLPGMK 76
Query: 365 HPNLVALLGYCLR---VD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL 420
H N++ +G R VD + +LI G+L+++L K +SW + IA ARGL
Sbjct: 77 HENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGL 134
Query: 421 WFLHSYSEG-------CIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR- 472
+LH G I HRDIK N+LL N A ++DFGL+ + G++ + +
Sbjct: 135 AYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQV 194
Query: 473 GTFGYLDPEYRSNCKVNSSG------DVYSFGIVLLQILS 506
GT Y+ PE +N D+Y+ G+VL ++ S
Sbjct: 195 GTRRYMAPEVLEGA-INFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 32/211 (15%)
Query: 320 IGEGITGKVYKGKLSNNQH------VAIK---HITNEGNVETFVREVASSSHVRHPNLVA 370
+G G G+VY+G++S + VA+K + +E + F+ E S H N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLF------GKDKCLSWIQRLEIAIDSARGLWFLH 424
+G L+ F++ EL G+L +L + L+ + L +A D A G +L
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 425 SYSEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRG------TF 475
E +HRDI N LL GP AK+ DFG+++ I Y +S R
Sbjct: 185 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-----YRASYYRKGGCAMLPV 236
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE S D +SFG++L +I S
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 32/211 (15%)
Query: 320 IGEGITGKVYKGKLSNNQH------VAIK---HITNEGNVETFVREVASSSHVRHPNLVA 370
+G G G+VY+G++S + VA+K + +E + F+ E S H N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLF------GKDKCLSWIQRLEIAIDSARGLWFLH 424
+G L+ F++ EL G+L +L + L+ + L +A D A G +L
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 425 SYSEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRG------TF 475
E +HRDI N LL GP AK+ DFG+++ I Y +S R
Sbjct: 175 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-----YRASYYRKGGCAMLPV 226
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE S D +SFG++L +I S
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 32/211 (15%)
Query: 320 IGEGITGKVYKGKLSNNQH------VAIK---HITNEGNVETFVREVASSSHVRHPNLVA 370
+G G G+VY+G++S + VA+K + +E + F+ E S H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLF------GKDKCLSWIQRLEIAIDSARGLWFLH 424
+G L+ F++ EL G+L +L + L+ + L +A D A G +L
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 425 SYSEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRG------TF 475
E +HRDI N LL GP AK+ DFG+++ I Y +S R
Sbjct: 173 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-----YRASYYRKGGCAMLPV 224
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE S D +SFG++L +I S
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 32/211 (15%)
Query: 320 IGEGITGKVYKGKLSNNQH------VAIK---HITNEGNVETFVREVASSSHVRHPNLVA 370
+G G G+VY+G++S + VA+K + +E + F+ E S H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLF------GKDKCLSWIQRLEIAIDSARGLWFLH 424
+G L+ F++ EL G+L +L + L+ + L +A D A G +L
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 425 SYSEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRG------TF 475
E +HRDI N LL GP AK+ DFG+++ I Y +S R
Sbjct: 158 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-----YRASYYRKGGCAMLPV 209
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE S D +SFG++L +I S
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 308 HYATEKLNELNLIGEGITGKVY--------KGKLSNNQHVAIKHITN---EGNVETFVRE 356
+ +KL +GEG G+V K K VA+K + + E ++ V E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 357 VASSSHV-RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK--------------- 400
+ + +H N++ LLG C + ++I E GNL E+L +
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 401 DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
++ +++ + ARG+ +L S+ CI HRD+ N+L+ N K++DFGL++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 461 DIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ + Y ++ R ++ PE + DV+SFG+++ +I +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 372 LGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
+ + DE + NG L +++ R A + L +LH
Sbjct: 98 Y-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG--- 152
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVN 489
I+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE + +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAS 212
Query: 490 SSGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 32/211 (15%)
Query: 320 IGEGITGKVYKGKLSNNQH------VAIK---HITNEGNVETFVREVASSSHVRHPNLVA 370
+G G G+VY+G++S + VA+K + +E + F+ E S H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLF------GKDKCLSWIQRLEIAIDSARGLWFLH 424
+G L+ F++ EL G+L +L + L+ + L +A D A G +L
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 425 SYSEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRG------TF 475
E +HRDI N LL GP AK+ DFG+++ I Y +S R
Sbjct: 158 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-----YRASYYRKGGCAMLPV 209
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE S D +SFG++L +I S
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 32/211 (15%)
Query: 320 IGEGITGKVYKGKLSNNQH------VAIK---HITNEGNVETFVREVASSSHVRHPNLVA 370
+G G G+VY+G++S + VA+K + +E + F+ E S H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLF------GKDKCLSWIQRLEIAIDSARGLWFLH 424
+G L+ F++ EL G+L +L + L+ + L +A D A G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 425 SYSEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRG------TF 475
E +HRDI N LL GP AK+ DFG+++ I Y +S R
Sbjct: 159 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-----YRASYYRKGGCAMLPV 210
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE S D +SFG++L +I S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCL--SWIQ 408
E REV +RHPN++ L + LI EL G L ++L K+ Q
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 133
Query: 409 RLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGE 464
L+ +D G+ +LHS I H D+KP NI+L PN KL DFG++ I+ G
Sbjct: 134 FLKQILD---GVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN 187
Query: 465 TYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ + + GT ++ PE + + D++S G++ +LSG
Sbjct: 188 EFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 339 VAIKHI--TNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLA 394
VA+K + + E ++ F RE+ ++H N+V G C LI E P G+L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
E+L + + I+ L+ +G+ +L + +HRD+ NIL+ K+ DF
Sbjct: 105 EYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 161
Query: 455 GLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL+KV+ + + G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 18/202 (8%)
Query: 316 ELNLIGEGITGKVYKGK--LSNNQHVAIKHIT---NEGNVETFVREVASSSHVRHPNLVA 370
+L+ +GEG VYKGK L++N VA+K I EG T +REV+ ++H N+V
Sbjct: 6 KLDKLGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVT 64
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAI---DSARGLWFLHSYS 427
L L++E + +L ++L D C + I + + RGL + H
Sbjct: 65 LHDIIHTEKSLTLVFEYL-DKDLKQYL---DDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-YRSNC 486
++HRD+KP N+L+ E KL+DFGL++ I +EV T Y P+ +
Sbjct: 121 ---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGST 176
Query: 487 KVNSSGDVYSFGIVLLQILSGK 508
++ D++ G + ++ +G+
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGR 198
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 32/211 (15%)
Query: 320 IGEGITGKVYKGKLSNNQH------VAIK---HITNEGNVETFVREVASSSHVRHPNLVA 370
+G G G+VY+G++S + VA+K + +E + F+ E S H N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLF------GKDKCLSWIQRLEIAIDSARGLWFLH 424
+G L+ F++ EL G+L +L + L+ + L +A D A G +L
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 425 SYSEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRG------TF 475
E +HRDI N LL GP AK+ DFG+++ I Y +S R
Sbjct: 165 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-----YRASYYRKGGCAMLPV 216
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE S D +SFG++L +I S
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 344 ITNEGNVETFVREVASSSHVR----HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-- 397
+ NE N E+ + ++V +P +V ++G C + L+ E+ G L ++L
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 120
Query: 398 --FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFG 455
KDK + +E+ + G+ +L E VHRD+ N+LL AK+SDFG
Sbjct: 121 NRHVKDKNI-----IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFG 172
Query: 456 LSKVIDIGETYASSEVRGTF--GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
LSK + E Y ++ G + + PE + K +S DV+SFG+++ + S
Sbjct: 173 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 344 ITNEGNVETFVREVASSSHVR----HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-- 397
+ NE N E+ + ++V +P +V ++G C + L+ E+ G L ++L
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 120
Query: 398 --FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFG 455
KDK + +E+ + G+ +L E VHRD+ N+LL AK+SDFG
Sbjct: 121 NRHVKDKNI-----IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFG 172
Query: 456 LSKVIDIGETYASSEVRGTF--GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
LSK + E Y ++ G + + PE + K +S DV+SFG+++ + S
Sbjct: 173 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPN 367
EK + L IGEG G VYK + + + A+K I +EG T +RE++ ++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+V L L++E + +L + L + L + + G+ + H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-YRSNC 486
++HRD+KP N+L+ E K++DFGL++ I + EV T Y P+ +
Sbjct: 121 ---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSK 176
Query: 487 KVNSSGDVYSFGIVLLQILSG 507
K +++ D++S G + ++++G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPN 367
EK + L IGEG G VYK + + + A+K I +EG T +RE++ ++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+V L L++E + +L + L + L + + G+ + H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-YRSNC 486
++HRD+KP N+L+ E K++DFGL++ I + EV T Y P+ +
Sbjct: 121 ---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSK 176
Query: 487 KVNSSGDVYSFGIVLLQILSG 507
K +++ D++S G + ++++G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 32/211 (15%)
Query: 320 IGEGITGKVYKGKLSNNQH------VAIK---HITNEGNVETFVREVASSSHVRHPNLVA 370
+G G G+VY+G++S + VA+K + +E + F+ E S H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLF------GKDKCLSWIQRLEIAIDSARGLWFLH 424
+G L+ F++ EL G+L +L + L+ + L +A D A G +L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 425 SYSEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRG------TF 475
E +HRDI N LL GP AK+ DFG+++ I Y +S R
Sbjct: 173 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-----YRASYYRKGGCAMLPV 224
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE S D +SFG++L +I S
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 372 LGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
+ + DE + NG L +++ R A + L +LH
Sbjct: 96 Y-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG--- 150
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVN 489
I+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSAC 210
Query: 490 SSGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 308 HYATEKLNELNLIGEGITGKVY--------KGKLSNNQHVAIKHITN---EGNVETFVRE 356
+ +KL +GEG G+V K K VA+K + + E ++ V E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 357 VASSSHV-RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK--------------- 400
+ + +H N++ LLG C + ++I E GNL E+L +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
Query: 401 DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
++ +++ + ARG+ +L S+ CI HRD+ N+L+ N K++DFGL++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 461 -DIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+I ++ R ++ PE + DV+SFG+++ +I +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 15/199 (7%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 372 LGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
+ + DE + NG L +++ R A + L +LH
Sbjct: 99 Y-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG--- 153
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKV 488
I+HRD+KP NILL + +++DFG +KV+ + + A+S V GT Y+ PE +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSA 212
Query: 489 NSSGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 213 CKSSDLWALGCIIYQLVAG 231
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
++ + NG L +++ R A + L +LH I
Sbjct: 75 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG---I 130
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVNS 490
+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 190
Query: 491 SGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 191 SSDLWALGCIIYQLVAG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
++ + NG L +++ R A + L +LH I
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG---I 129
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVNS 490
+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 189
Query: 491 SGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 190 SSDLWALGCIIYQLVAG 206
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 308 HYATEKLNELNLIGEGITGKVY--------KGKLSNNQHVAIKHITN---EGNVETFVRE 356
+ +KL +GEG G+V K K VA+K + + E ++ V E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 357 VASSSHV-RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK--------------- 400
+ + +H N++ LLG C + ++I E GNL E+L +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 401 DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
++ +++ + ARG+ +L S+ CI HRD+ N+L+ N K++DFGL++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 461 -DIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+I ++ R ++ PE + DV+SFG+++ +I +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 32/211 (15%)
Query: 320 IGEGITGKVYKGKLSNNQH------VAIK---HITNEGNVETFVREVASSSHVRHPNLVA 370
+G G G+VY+G++S + VA+K + +E + F+ E S H N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLF------GKDKCLSWIQRLEIAIDSARGLWFLH 424
+G L+ F++ EL G+L +L + L+ + L +A D A G +L
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 425 SYSEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRG------TF 475
E +HRDI N LL GP AK+ DFG+++ I Y +S R
Sbjct: 150 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-----YRASYYRKGGCAMLPV 201
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE S D +SFG++L +I S
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 344 ITNEGNVETFVREVASSSHVR----HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-- 397
+ NE N E+ + ++V +P +V ++G C + L+ E+ G L ++L
Sbjct: 42 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 100
Query: 398 --FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFG 455
KDK + +E+ + G+ +L E VHRD+ N+LL AK+SDFG
Sbjct: 101 NRHVKDKNI-----IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFG 152
Query: 456 LSKVIDIGETYASSEVRGTF--GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
LSK + E Y ++ G + + PE + K +S DV+SFG+++ + S
Sbjct: 153 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHITNEGNVE-------TFVREVASSS 361
AT + + IG G G VYK + ++ H VA+K + + VREVA
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 362 HVR---HPNLVALLGYCL--RVD---ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA 413
+ HPN+V L+ C R D + L++E + +L +L DK E
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL---DKAPPPGLPAETI 122
Query: 414 IDSAR----GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASS 469
D R GL FLH+ CIVHRD+KP NIL+ KL+DFGL+++ A +
Sbjct: 123 KDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSY--QMALT 177
Query: 470 EVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
V T Y PE + D++S G + ++ K
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 372 LGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
+ + DE + NG L +++ R A + L +LH
Sbjct: 98 Y-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG--- 152
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVN 489
I+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 490 SSGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
++ + NG L +++ R A + L +LH I
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG---KGI 150
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEYRSNCKVN 489
+HRD+KP NILL + +++DFG +KV+ + + A+S V GT Y+ PE +
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSAC 209
Query: 490 SSGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 210 KSSDLWALGCIIYQLVAG 227
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 372 LGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
+ + DE + NG L +++ R A + L +LH
Sbjct: 96 Y-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG--- 150
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVN 489
I+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 490 SSGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 372 LGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
+ + DE + NG L +++ R A + L +LH
Sbjct: 98 Y-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG--- 152
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVN 489
I+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 490 SSGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 372 LGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
+ + DE + NG L +++ R A + L +LH
Sbjct: 96 Y-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG--- 150
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVN 489
I+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 490 SSGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 372 LGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
+ + DE + NG L +++ R A + L +LH
Sbjct: 99 Y-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG--- 153
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVN 489
I+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 213
Query: 490 SSGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 214 KSSDLWALGCIIYQLVAG 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 372 LGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
+ + DE + NG L +++ R A + L +LH
Sbjct: 98 Y-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG--- 152
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVN 489
I+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 490 SSGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
++ + NG L +++ R A + L +LH I
Sbjct: 76 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG---I 131
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVNS 490
+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 191
Query: 491 SGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 192 SSDLWALGCIIYQLVAG 208
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
++ + NG L +++ R A + L +LH I
Sbjct: 73 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG---I 128
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVNS 490
+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 188
Query: 491 SGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 189 SSDLWALGCIIYQLVAG 205
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 32/211 (15%)
Query: 320 IGEGITGKVYKGKLSNNQH------VAIK---HITNEGNVETFVREVASSSHVRHPNLVA 370
+G G G+VY+G++S + VA+K + +E + F+ E S H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLF------GKDKCLSWIQRLEIAIDSARGLWFLH 424
+G L+ F++ EL G+L +L + L+ + L +A D A G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 425 SYSEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRG------TF 475
E +HRDI N LL GP AK+ DFG+++ I Y +S R
Sbjct: 159 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDI-----YRASYYRKGGCAMLPV 210
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE S D +SFG++L +I S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 344 ITNEGNVETFVREVASSSHVR----HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-- 397
+ NE N E+ + ++V +P +V ++G C + L+ E+ G L ++L
Sbjct: 40 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 98
Query: 398 --FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFG 455
KDK + +E+ + G+ +L E VHRD+ N+LL AK+SDFG
Sbjct: 99 NRHVKDKNI-----IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFG 150
Query: 456 LSKVIDIGETYASSEVRGTF--GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
LSK + E Y ++ G + + PE + K +S DV+SFG+++ + S
Sbjct: 151 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 344 ITNEGNVETFVREVASSSHVR----HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-- 397
+ NE N E+ + ++V +P +V ++G C + L+ E+ G L ++L
Sbjct: 52 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 110
Query: 398 --FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFG 455
KDK + +E+ + G+ +L E VHRD+ N+LL AK+SDFG
Sbjct: 111 NRHVKDKNI-----IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFG 162
Query: 456 LSKVIDIGETYASSEVRGTF--GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
LSK + E Y ++ G + + PE + K +S DV+SFG+++ + S
Sbjct: 163 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 19/236 (8%)
Query: 319 LIGEGITGKVYKGKLSN-NQHVAIKHITNE-----GNVE-TFVREVASSSHVRHPNLVAL 371
++G+G GKV+ + NQ AIK + + +VE T V + S HP L +
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 83
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSW-IQRLEI-AIDSARGLWFLHSYSEG 429
+ F + E G+L ++ C + + R A + GL FLHS
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG-- 138
Query: 430 CIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVN 489
IV+RD+K NILL + K++DFG+ K +G+ ++ GT Y+ PE K N
Sbjct: 139 -IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA-KTNXFCGTPDYIAPEILLGQKYN 196
Query: 490 SSGDVYSFGIVLLQILSGK---KAKVLTRAGSALELADPKLDREYSIEAFDLTLQL 542
S D +SFG++L ++L G+ + ++ + +P R EA DL ++L
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKL 252
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
++ + NG L +++ R A + L +LH I
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG---KGI 150
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVNS 490
+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 210
Query: 491 SGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 211 SSDLWALGCIIYQLVAG 227
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 344 ITNEGNVETFVREVASSSHVR----HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-- 397
+ NE N E+ + ++V +P +V ++G C + L+ E+ G L ++L
Sbjct: 60 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 118
Query: 398 --FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFG 455
KDK + +E+ + G+ +L E VHRD+ N+LL AK+SDFG
Sbjct: 119 NRHVKDKNI-----IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFG 170
Query: 456 LSKVIDIGETYASSEVRGTF--GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
LSK + E Y ++ G + + PE + K +S DV+SFG+++ + S
Sbjct: 171 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 344 ITNEGNVETFVREVASSSHVR----HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-- 397
+ NE N E+ + ++V +P +V ++G C + L+ E+ G L ++L
Sbjct: 46 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 104
Query: 398 --FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFG 455
KDK + +E+ + G+ +L E VHRD+ N+LL AK+SDFG
Sbjct: 105 NRHVKDKNI-----IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFG 156
Query: 456 LSKVIDIGETYASSEVRGTF--GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
LSK + E Y ++ G + + PE + K +S DV+SFG+++ + S
Sbjct: 157 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 11/197 (5%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
++ + NG L +++ R A + L +LH I
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG---I 135
Query: 432 VHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVNS 490
+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 195
Query: 491 SGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 196 SSDLWALGCIIYQLVAG 212
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 372 LGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
+ + DE + NG L +++ R A + L +LH
Sbjct: 98 Y-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG--- 152
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVN 489
I+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 490 SSGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 96/220 (43%), Gaps = 36/220 (16%)
Query: 320 IGEGITGKVYK------GKLSNNQHVAIKHITNEGNV---ETFVREVASSSHV-RHPNLV 369
+G G GKV + GK VA+K + + + E + E+ SH+ +H N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLF-------------GKD---------KCLSWI 407
LLG C +I E C G+L +L G+D + L
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 408 QRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY- 466
L + A+G+ FL S + CI HRD+ N+LL AK+ DFGL++ I Y
Sbjct: 159 DLLHFSSQVAQGMAFLAS--KNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
R ++ PE +C DV+S+GI+L +I S
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPN 367
EK + L IGEG G VYK + + + A+K I +EG T +RE++ ++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+V L L++E + +L + L + L + + G+ + H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-YRSNC 486
++HRD+KP N+L+ E K++DFGL++ I + E+ T Y P+ +
Sbjct: 121 ---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSK 176
Query: 487 KVNSSGDVYSFGIVLLQILSG 507
K +++ D++S G + ++++G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 318 NLIGEG-ITGKVYKGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPNLVAL 371
++GEG + V +L+ ++ AIK HI E V RE S + HP V L
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 372 LGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
+ + DE + NG L +++ R A + L +LH
Sbjct: 101 Y-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG--- 155
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVN 489
I+HRD+KP NILL + +++DFG +KV+ A ++ GT Y+ PE +
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 215
Query: 490 SSGDVYSFGIVLLQILSG 507
S D+++ G ++ Q+++G
Sbjct: 216 KSSDLWALGCIIYQLVAG 233
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 344 ITNEGNVETFVREVASSSHVR----HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-- 397
+ NE N E+ + ++V +P +V ++G C + L+ E+ G L ++L
Sbjct: 404 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 462
Query: 398 --FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFG 455
KDK + +E+ + G+ +L E VHRD+ N+LL AK+SDFG
Sbjct: 463 NRHVKDKNI-----IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFG 514
Query: 456 LSKVIDIGETYASSEVRGTF--GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
LSK + E Y ++ G + + PE + K +S DV+SFG+++ + S
Sbjct: 515 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 308 HYATEKLNELNLIGEGITGKVY--------KGKLSNNQHVAIKHITN---EGNVETFVRE 356
+ +KL +GEG G+V K K VA+K + + E ++ V E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 357 VASSSHV-RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK--------------- 400
+ + +H N++ LLG C + ++I E GNL E+L +
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 401 DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
++ +++ + ARG+ +L S+ CI HRD+ N+L+ N K++DFGL++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 461 DIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ + Y ++ R ++ PE + DV+SFG+++ +I +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 317 LNLIGEGITGKVYKGKL---SNNQHVAIKHITNEGNVETFVREVASSS-------HVRHP 366
L ++G+G GKV+ K S+ + + + + ++ VR+ + V HP
Sbjct: 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK--VRDRVRTKMERDILVEVNHP 86
Query: 367 NLVALLGYCLRVD-ECFLIYELCPNGNL-----AEWLFGKDKCLSWIQRLEIAIDSARGL 420
+V L Y + + + +LI + G+L E +F ++ ++ L +A+D
Sbjct: 87 FIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD----- 140
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
H +S G I++RD+KP NILL KL+DFGLSK E A S GT Y+ P
Sbjct: 141 ---HLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAP 195
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + S D +SFG+++ ++L+G
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 344 ITNEGNVETFVREVASSSHVR----HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-- 397
+ NE N E+ + ++V +P +V ++G C + L+ E+ G L ++L
Sbjct: 405 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 463
Query: 398 --FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFG 455
KDK + +E+ + G+ +L E VHRD+ N+LL AK+SDFG
Sbjct: 464 NRHVKDKNI-----IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFG 515
Query: 456 LSKVIDIGETYASSEVRGTF--GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
LSK + E Y ++ G + + PE + K +S DV+SFG+++ + S
Sbjct: 516 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 320 IGEGITGKVYKGKLSNNQH------VAIK---HITNEGNVETFVREVASSSHVRHPNLVA 370
+G G G+VY+G++S + VA+K + +E + F+ E S H N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLF------GKDKCLSWIQRLEIAIDSARGLWFLH 424
+G L+ F++ EL G+L +L + L+ + L +A D A G +L
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 425 SYSEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSE-VRGTFGYLDP 480
E +HRDI N LL GP AK+ DFG+++ I Y ++ P
Sbjct: 199 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILS 506
E S D +SFG++L +I S
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 16/220 (7%)
Query: 299 CPRYTIREVHYATEKLNELNLIGEGITGKVYKGK---LSNN--QHVAIKHI--TNEGNVE 351
PR + + L L +G+G G V + L +N + VA+K + + E ++
Sbjct: 15 VPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 74
Query: 352 TFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLAEWLFGKDKCLSWIQR 409
F RE+ ++H N+V G C LI E P G+L ++L + + I+
Sbjct: 75 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 134
Query: 410 LEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASS 469
L+ +G+ +L + +HRD+ NIL+ K+ DFGL+KV+ +
Sbjct: 135 LQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 191
Query: 470 EVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 192 KEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 308 HYATEKLNELNLIGEGITGKVY--------KGKLSNNQHVAIKHITN---EGNVETFVRE 356
+ +KL +GEG G+V K K VA+K + + E ++ V E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 357 VASSSHV-RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK--------------- 400
+ + +H N++ LLG C + ++I E GNL E+L +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 401 DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
++ +++ + ARG+ +L S+ CI HRD+ N+L+ N K++DFGL++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 461 DIGETYA-SSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ + Y ++ R ++ PE + DV+SFG+++ +I +
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 308 HYATEKLNELNLIGEGITGKVY--------KGKLSNNQHVAIKHITN---EGNVETFVRE 356
+ +KL +GEG G+V K K VA+K + + E ++ V E
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136
Query: 357 VASSSHV-RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK--------------- 400
+ + +H N++ LLG C + ++I E GNL E+L +
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 401 DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
++ +++ + ARG+ +L S+ CI HRD+ N+L+ N K++DFGL++ I
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIADFGLARDI 253
Query: 461 DIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ + Y ++ R ++ PE + DV+SFG+++ +I +
Sbjct: 254 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 320 IGEGITGKVYKGKLSNNQH------VAIK---HITNEGNVETFVREVASSSHVRHPNLVA 370
+G G G+VY+G++S + VA+K + +E + F+ E S H N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLF------GKDKCLSWIQRLEIAIDSARGLWFLH 424
+G L+ F++ EL G+L +L + L+ + L +A D A G +L
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 425 SYSEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSE-VRGTFGYLDP 480
E +HRDI N LL GP AK+ DFG+++ I Y ++ P
Sbjct: 176 ---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILS 506
E S D +SFG++L +I S
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 16/220 (7%)
Query: 299 CPRYTIREVHYATEKLNELNLIGEGITGKVYKGK---LSNN--QHVAIKHI--TNEGNVE 351
PR + + L L +G+G G V + L +N + VA+K + + E ++
Sbjct: 15 VPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 74
Query: 352 TFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLAEWLFGKDKCLSWIQR 409
F RE+ ++H N+V G C LI E P G+L ++L + + I+
Sbjct: 75 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 134
Query: 410 LEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASS 469
L+ +G+ +L + +HRD+ NIL+ K+ DFGL+KV+ +
Sbjct: 135 LQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 191
Query: 470 EVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 192 KEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 308 HYATEKLNELNLIGEGITGKVY--------KGKLSNNQHVAIKHITN---EGNVETFVRE 356
+ +KL +GEG G+V K K VA+K + + E ++ V E
Sbjct: 18 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 77
Query: 357 VASSSHV-RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK--------------- 400
+ + +H N++ LLG C + ++I E GNL E+L +
Sbjct: 78 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
Query: 401 DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
++ +++ + ARG+ +L S+ CI HRD+ N+L+ N K++DFGL++ I
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLTARNVLVTENNVMKIADFGLARDI 194
Query: 461 DIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ + Y ++ R ++ PE + DV+SFG+++ +I +
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 31/227 (13%)
Query: 308 HYATEKLNELNLIGEGITGKVY--------KGKLSNNQHVAIKHITNEGNVETFVREVAS 359
+ +KL +GEG G+V K K VA+K + ++ E V+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSE 90
Query: 360 SSHVR----HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK--------------- 400
++ H N++ LLG C + ++I E GNL E+L +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 401 DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
++ +++ + ARG+ +L S+ CI HRD+ N+L+ N K++DFGL++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 461 DIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ + Y ++ R ++ PE + DV+SFG+++ +I +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 339 VAIKHI--TNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLA 394
VA+K + + E ++ F RE+ ++H N+V G C LI E P G+L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
++L + + I+ L+ +G+ +L + +HRD+ NIL+ K+ DF
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 158
Query: 455 GLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL+KV+ + + + G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 159 GLTKVLPQDKEFFKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 308 HYATEKLNELNLIGEGITGKVY--------KGKLSNNQHVAIKHITN---EGNVETFVRE 356
+ +KL +GEG G+V K K VA+K + + E ++ V E
Sbjct: 20 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 79
Query: 357 VASSSHV-RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK--------------- 400
+ + +H N++ LLG C + ++I E GNL E+L +
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
Query: 401 DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
++ +++ + ARG+ +L S+ CI HRD+ N+L+ N K++DFGL++ I
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIADFGLARDI 196
Query: 461 DIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ + Y ++ R ++ PE + DV+SFG+++ +I +
Sbjct: 197 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 26/218 (11%)
Query: 314 LNELNLIGEGITGKVYKGKLSNNQHVAIKHIT-NEGNVETFVREVASSSHVRHPNLVALL 372
L L + G G V+K +L N+ VA+K + RE+ S+ ++H NL+ +
Sbjct: 17 LQLLEIKARGRFGCVWKAQLMND-FVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFI 75
Query: 373 -----GYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
G L V E +LI G+L ++L K ++W + +A +RGL +LH
Sbjct: 76 AAEKRGSNLEV-ELWLITAFHDKGSLTDYL--KGNIITWNELCHVAETMSRGLSYLHEDV 132
Query: 428 EGC--------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR-GTFGYL 478
C I HRD K N+LL + A L+DFGL+ + G+ + + GT Y+
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 479 DPEYRSNCKVNSSG------DVYSFGIVLLQILSGKKA 510
PE +N D+Y+ G+VL +++S KA
Sbjct: 193 APEVLEGA-INFQRDAFLRIDMYAMGLVLWELVSRCKA 229
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 317 LNLIGEGITGKVYKGKL---SNNQHVAIKHITNEGNVETFVREVASSS-------HVRHP 366
L ++G+G GKV+ K S+ + + + + ++ VR+ + V HP
Sbjct: 30 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK--VRDRVRTKMERDILVEVNHP 87
Query: 367 NLVALLGYCLRVD-ECFLIYELCPNGNL-----AEWLFGKDKCLSWIQRLEIAIDSARGL 420
+V L Y + + + +LI + G+L E +F ++ ++ L +A+D
Sbjct: 88 FIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD----- 141
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
H +S G I++RD+KP NILL KL+DFGLSK E A S GT Y+ P
Sbjct: 142 ---HLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAP 196
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + S D +SFG+++ ++L+G
Sbjct: 197 EVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 308 HYATEKLNELNLIGEGITGKVY--------KGKLSNNQHVAIKHITN---EGNVETFVRE 356
+ +KL +GEG G+V K K VA+K + + E ++ V E
Sbjct: 23 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 82
Query: 357 VASSSHV-RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK--------------- 400
+ + +H N++ LLG C + ++I E GNL E+L +
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
Query: 401 DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
++ +++ + ARG+ +L S+ CI HRD+ N+L+ N K++DFGL++ I
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIADFGLARDI 199
Query: 461 DIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ + Y ++ R ++ PE + DV+SFG+++ +I +
Sbjct: 200 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 317 LNLIGEGITGKVYKGKL---SNNQHVAIKHITNEGNVETFVREVASSS-------HVRHP 366
L ++G+G GKV+ K S+ + + + + ++ VR+ + V HP
Sbjct: 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK--VRDRVRTKMERDILVEVNHP 86
Query: 367 NLVALLGYCLRVD-ECFLIYELCPNGNL-----AEWLFGKDKCLSWIQRLEIAIDSARGL 420
+V L Y + + + +LI + G+L E +F ++ ++ L +A+D
Sbjct: 87 FIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD----- 140
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
H +S G I++RD+KP NILL KL+DFGLSK E A S GT Y+ P
Sbjct: 141 ---HLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAP 195
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + S D +SFG+++ ++L+G
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 339 VAIKHI--TNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLA 394
VA+K + + E ++ F RE+ ++H N+V G C LI E P G+L
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
++L + + I+ L+ +G+ +L + +HR++ NIL+ K+ DF
Sbjct: 103 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRNLATRNILVENENRVKIGDF 159
Query: 455 GLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL+KV+ + Y + G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 160 GLTKVLPQDKEYYKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 304 IREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHIT----NEGNVETFVREVAS 359
++E E+L LIG+G G+VY G+ VAI+ I NE ++ F REV +
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMA 82
Query: 360 SSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARG 419
RH N+V +G C+ +I LC L + L + +IA + +G
Sbjct: 83 YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKG 142
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGL---SKVIDIGETYASSEVR-GTF 475
+ +LH+ I+H+D+K N+ N + ++DFGL S V+ G ++ G
Sbjct: 143 MGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWL 198
Query: 476 GYLDPEYRSNCKVNSSGDVYSF 497
+L PE ++ D F
Sbjct: 199 CHLAPEIIRQLSPDTEEDKLPF 220
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 308 HYATEKLNELNLIGEGITGKVY--------KGKLSNNQHVAIKHITN---EGNVETFVRE 356
+ +KL +GEG G+V K K VA+K + + E ++ V E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 357 VASSSHV-RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK--------------- 400
+ + +H N++ LLG C + ++I E GNL E+L +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 401 DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
++ +++ + ARG+ +L S+ CI HRD+ N+L+ N +++DFGL++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMRIADFGLARDI 207
Query: 461 DIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ + Y ++ R ++ PE + DV+SFG+++ +I +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 317 LNLIGEGITGKVY---KGKLSNNQHVAIKHITNEGNVETFVR-----EVASSSHVRHPNL 368
L ++G+G GKV+ K ++ H+ + + ++ R E + V HP
Sbjct: 33 LKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHP-F 91
Query: 369 VALLGYCLRVD-ECFLIYELCPNGNL-----AEWLFGKDKCLSWIQRLEIAIDSARGLWF 422
V L Y + + + +LI + G+L E +F ++ ++ L + +D
Sbjct: 92 VVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLD------- 144
Query: 423 LHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
H +S G I++RD+KP NILL KL+DFGLSK E A S GT Y+ PE
Sbjct: 145 -HLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC-GTVEYMAPEV 201
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSG 507
+ + S D +S+G+++ ++L+G
Sbjct: 202 VNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 26/224 (11%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVR 355
Y E A EK+ +G+G G VY+G K VAIK + ++ +
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 74
Query: 356 EVASSSHVRHPN---LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCL-------- 404
+ +S ++ N +V LLG + +I EL G+L +L +
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 134
Query: 405 -SWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
S + +++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIY 189
Query: 464 ET-YASSEVRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
ET Y +G ++ PE + + DV+SFG+VL +I
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 40/209 (19%)
Query: 320 IGEGITGKV-YKGKLSNNQHVAIKHITNE----GNVETFV-REVASSSHVRHPNLVALLG 373
+GEG GKV Q VA+K I+ + ++ V RE++ +RHP+++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 374 YCLRVDECFLIYELCPNGNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSE 428
+ ++ E G L +++ K D+ + Q++ AI+ + H +
Sbjct: 77 VITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIE------YCHRHK- 128
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGE---------TYASSEVRGTFGYLD 479
IVHRD+KP N+LL N K++DFGLS ++ G YA+ EV Y
Sbjct: 129 --IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAG 186
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
PE DV+S GIVL +L G+
Sbjct: 187 PEV----------DVWSCGIVLYVMLVGR 205
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 26/232 (11%)
Query: 291 GVQLKDPGCPRYTIREVHYATEKLNELNL------IGEGITGKVYKGKLSNNQHVAIKHI 344
GV L ++++ + T LN + +G+G GKVYK + +A +
Sbjct: 10 GVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV 69
Query: 345 TN---EGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKD 401
+ E +E ++ E+ + HPN+V LL + +++ E C G + + +
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 129
Query: 402 KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLS---- 457
+ L+ Q + + L +LH + I+HRD+K NIL + + KL+DFG+S
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
Query: 458 KVIDIGETYASSEVRGTFGYLDPEY-----RSNCKVNSSGDVYSFGIVLLQI 504
+ I +++ GT ++ PE + + DV+S GI L+++
Sbjct: 187 RTIQRRDSFI-----GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 27/214 (12%)
Query: 320 IGEGITGKVYKGKLSN------NQHVAIKHI--TNEGNVETFVREVASSSHVRHPNLVAL 371
+GEG GKV+ + N VA+K + +E + F RE + ++H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLF-----------GKDKC---LSWIQRLEIAIDSA 417
G C +++E +G+L +L G+D L Q L +A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 418 RGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFG 476
G+ +L VHRD+ N L+G K+ DFG+S+ I + Y
Sbjct: 146 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 477 YLDPEYRSNCKVNSSGDVYSFGIVLLQILS-GKK 509
++ PE K + DV+SFG+VL +I + GK+
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 236
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 22/206 (10%)
Query: 318 NLIGEGITGKVYKGKLSNNQ----HVAIKHI----TNEGNVETFVREVASSSHVRHPNLV 369
++GEG G V +G L VA+K + +++ +E F+ E A HPN++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 370 ALLGYCLR-----VDECFLIYELCPNGNLAEWLF-----GKDKCLSWIQRLEIAIDSARG 419
LLG C+ + + +I G+L +L K + L+ +D A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV-RGTFGYL 478
+ +L S +HRD+ N +L + ++DFGLSK I G+ Y + + ++
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 479 DPEYRSNCKVNSSGDVYSFGIVLLQI 504
E ++ S DV++FG+ + +I
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 27/214 (12%)
Query: 320 IGEGITGKVYKGKLSN------NQHVAIKHI--TNEGNVETFVREVASSSHVRHPNLVAL 371
+GEG GKV+ + N VA+K + +E + F RE + ++H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLF-----------GKDKC---LSWIQRLEIAIDSA 417
G C +++E +G+L +L G+D L Q L +A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 418 RGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFG 476
G+ +L VHRD+ N L+G K+ DFG+S+ I + Y
Sbjct: 140 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 477 YLDPEYRSNCKVNSSGDVYSFGIVLLQILS-GKK 509
++ PE K + DV+SFG+VL +I + GK+
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 230
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 26/224 (11%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVR 355
Y E A EK+ +G+G G VY+G K VAIK + ++ +
Sbjct: 5 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 64
Query: 356 EVASSSHVRHPN---LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCL-------- 404
+ +S ++ N +V LLG + +I EL G+L +L +
Sbjct: 65 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 124
Query: 405 -SWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
S + +++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI
Sbjct: 125 PSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIY 179
Query: 464 ET-YASSEVRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
ET Y +G ++ PE + + DV+SFG+VL +I
Sbjct: 180 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 24/192 (12%)
Query: 324 ITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFL 383
+ G+ Y K+ N + ++ + + + RE ++HPN+V L +L
Sbjct: 45 LAGQEYAAKIINTKKLSAR------DHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 98
Query: 384 IYELCPNGNLAEWLFGKD-----KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKP 438
I++L G L E + ++ IQ++ A+ LH + G +VHRD+KP
Sbjct: 99 IFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV--------LHCHQMG-VVHRDLKP 149
Query: 439 TNILLGPNFEA---KLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N+LL + KL+DFGL+ ++ GE A GT GYL PE D++
Sbjct: 150 ENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLW 208
Query: 496 SFGIVLLQILSG 507
+ G++L +L G
Sbjct: 209 ACGVILYILLVG 220
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 339 VAIKHI--TNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLA 394
VA+K + + E ++ F RE+ ++H N+V G C LI E P G+L
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
++L + + I+ L+ +G+ +L + +HRD+ NIL+ K+ DF
Sbjct: 133 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 189
Query: 455 GLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL+KV+ + + G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 190 GLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 339 VAIKHI--TNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLA 394
VA+K + + E ++ F RE+ ++H N+V G C LI E P G+L
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
++L + + I+ L+ +G+ +L + +HRD+ NIL+ K+ DF
Sbjct: 108 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 164
Query: 455 GLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL+KV+ + + G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 165 GLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 339 VAIKHI--TNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLA 394
VA+K + + E ++ F RE+ ++H N+V G C LI E P G+L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
++L + + I+ L+ +G+ +L + +HRD+ NIL+ K+ DF
Sbjct: 105 DYLQAHAERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 161
Query: 455 GLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL+KV+ + + G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 41/230 (17%)
Query: 303 TIREVHYATE--KLNELNLIGEGITGKVYKGKLSNNQHV-AIKHITNEGNVETFVR---- 355
TI Y E L L +G G G+V+K + HV A+K + GN E R
Sbjct: 14 TIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMD 73
Query: 356 -EVASSSHVRHPNLVALLGYCLRVDECFLIYELCP----------NGNLAEWLFGKDKCL 404
+V SH P +V G + + F+ EL G + E + GK
Sbjct: 74 LDVVLKSH-DCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGK---- 128
Query: 405 SWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLS-KVIDIG 463
+ +AI + L++L + ++HRD+KP+NILL + KL DFG+S +++D
Sbjct: 129 -----MTVAI--VKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD-- 177
Query: 464 ETYASSEVRGTFGYL-----DPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
A G Y+ DP + + DV+S GI L+++ +G+
Sbjct: 178 -DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 339 VAIKHI--TNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLA 394
VA+K + + E ++ F RE+ ++H N+V G C LI E P G+L
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
++L + + I+ L+ +G+ +L + +HRD+ NIL+ K+ DF
Sbjct: 100 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 156
Query: 455 GLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL+KV+ + + G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 157 GLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 26/210 (12%)
Query: 320 IGEGITGKVYKGKLSN------NQHVAIKHI--TNEGNVETFVREVASSSHVRHPNLVAL 371
+GEG GKV+ + N VA+K + +E + F RE + ++H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLF-----------GKDKC---LSWIQRLEIAIDSA 417
G C +++E +G+L +L G+D L Q L +A A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 418 RGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFG 476
G+ +L VHRD+ N L+G K+ DFG+S+ I + Y
Sbjct: 169 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 477 YLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE K + DV+SFG+VL +I +
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 26/232 (11%)
Query: 291 GVQLKDPGCPRYTIREVHYATEKLNELNL------IGEGITGKVYKGKLSNNQHVAIKHI 344
GV L ++++ + T LN + +G+G GKVYK + +A +
Sbjct: 10 GVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV 69
Query: 345 TN---EGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKD 401
+ E +E ++ E+ + HPN+V LL + +++ E C G + + +
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 129
Query: 402 KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLS---- 457
+ L+ Q + + L +LH + I+HRD+K NIL + + KL+DFG+S
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
Query: 458 KVIDIGETYASSEVRGTFGYLDPEY-----RSNCKVNSSGDVYSFGIVLLQI 504
+ I +++ GT ++ PE + + DV+S GI L+++
Sbjct: 187 RXIQRRDSFI-----GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 339 VAIKHI--TNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLA 394
VA+K + + E ++ F RE+ ++H N+V G C LI E P G+L
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
++L + + I+ L+ +G+ +L + +HRD+ NIL+ K+ DF
Sbjct: 107 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 163
Query: 455 GLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL+KV+ + + G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 164 GLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 339 VAIKHI--TNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLA 394
VA+K + + E ++ F RE+ ++H N+V G C LI E P G+L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
++L + + I+ L+ +G+ +L + +HRD+ NIL+ K+ DF
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 158
Query: 455 GLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL+KV+ + + G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 159 GLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 18/228 (7%)
Query: 291 GVQLKDPGCPRYTIREVHYATEKLNELNL------IGEGITGKVYKGKLSNNQHVAIKHI 344
GV L ++++ + T LN + +G+G GKVYK + +A +
Sbjct: 10 GVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV 69
Query: 345 TN---EGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKD 401
+ E +E ++ E+ + HPN+V LL + +++ E C G + + +
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 129
Query: 402 KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVID 461
+ L+ Q + + L +LH + I+HRD+K NIL + + KL+DFG+S +
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS-AKN 185
Query: 462 IGETYASSEVRGTFGYLDPEY-----RSNCKVNSSGDVYSFGIVLLQI 504
GT ++ PE + + DV+S GI L+++
Sbjct: 186 TRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 339 VAIKHI--TNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLA 394
VA+K + + E ++ F RE+ ++H N+V G C LI E P G+L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
++L + + I+ L+ +G+ +L + +HRD+ NIL+ K+ DF
Sbjct: 105 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 161
Query: 455 GLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL+KV+ + + G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 339 VAIKHI--TNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLA 394
VA+K + + E ++ F RE+ ++H N+V G C LI E P G+L
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
++L + + I+ L+ +G+ +L + +HRD+ NIL+ K+ DF
Sbjct: 109 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 165
Query: 455 GLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL+KV+ + + G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 166 GLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 339 VAIKHI--TNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLA 394
VA+K + + E ++ F RE+ ++H N+V G C LI E P G+L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
++L + + I+ L+ +G+ +L + +HRD+ NIL+ K+ DF
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 158
Query: 455 GLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL+KV+ + + G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 159 GLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 339 VAIKHI--TNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLA 394
VA+K + + E ++ F RE+ ++H N+V G C LI E P G+L
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
++L + + I+ L+ +G+ +L + +HRD+ NIL+ K+ DF
Sbjct: 106 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 162
Query: 455 GLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL+KV+ + + G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 163 GLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 318 NLIGEGITGKVYKGKLSNNQH-VAIKHITNE---GNVETFVREVASSSHVRHPNLVALLG 373
+++G G +V + Q VAIK I E G + E+A ++HPN+VAL
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 374 YCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLW-------FLHSY 426
+LI +L G L + + K + +R D++R ++ +LH
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKG---FYTER-----DASRLIFQVLDAVKYLHDL 135
Query: 427 SEGCIVHRDIKPTNIL---LGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
IVHRD+KP N+L L + + +SDFGLSK+ D G +++ GT GY+ PE
Sbjct: 136 G---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVL 190
Query: 484 SNCKVNSSGDVYSFGIVLLQILSG 507
+ + + D +S G++ +L G
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 339 VAIKHI--TNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLA 394
VA+K + + E ++ F RE+ ++H N+V G C LI E P G+L
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
++L + + I+ L+ +G+ +L + +HRD+ NIL+ K+ DF
Sbjct: 101 DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDF 157
Query: 455 GLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL+KV+ + + G F Y PE + K + + DV+SFG+VL ++ +
Sbjct: 158 GLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 107/254 (42%), Gaps = 28/254 (11%)
Query: 276 RYYKSNPPAKITSFKGVQLKDPGCPRYTIREVHYATEK------------------LNEL 317
R PPA+ G+ K PG PR RE + + L+
Sbjct: 98 RRDSPPPPARARQENGMPEKPPG-PRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNF 156
Query: 318 NLIGEGITGKVYKGKL-SNNQHVAIKH--ITNEGNVETFVREVASSSHVRHPNLVALLGY 374
IGEG TG V + S+ + VA+K + + E EV +H N+V +
Sbjct: 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 216
Query: 375 CLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHR 434
L DE +++ E G L + + I + +A+ A L LH+ ++HR
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQA--LSVLHAQG---VIHR 271
Query: 435 DIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDV 494
DIK +ILL + KLSDFG + E + GT ++ PE S D+
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 330
Query: 495 YSFGIVLLQILSGK 508
+S GI++++++ G+
Sbjct: 331 WSLGIMVIEMVDGE 344
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 318 NLIGEGITGKVYKGKLSNNQH-VAIKHITNE---GNVETFVREVASSSHVRHPNLVALLG 373
+++G G +V + Q VAIK I E G + E+A ++HPN+VAL
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 374 YCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLW-------FLHSY 426
+LI +L G L + + K + +R D++R ++ +LH
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKG---FYTER-----DASRLIFQVLDAVKYLHDL 135
Query: 427 SEGCIVHRDIKPTNIL---LGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
IVHRD+KP N+L L + + +SDFGLSK+ D G +++ GT GY+ PE
Sbjct: 136 G---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVL 190
Query: 484 SNCKVNSSGDVYSFGIVLLQILSG 507
+ + + D +S G++ +L G
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 318 NLIGEGITGKVYKGKLSNNQH-VAIKHITNE---GNVETFVREVASSSHVRHPNLVALLG 373
+++G G +V + Q VAIK I E G + E+A ++HPN+VAL
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 374 YCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLW-------FLHSY 426
+LI +L G L + + K + +R D++R ++ +LH
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKG---FYTER-----DASRLIFQVLDAVKYLHDL 135
Query: 427 SEGCIVHRDIKPTNIL---LGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
IVHRD+KP N+L L + + +SDFGLSK+ D G +++ GT GY+ PE
Sbjct: 136 G---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVL 190
Query: 484 SNCKVNSSGDVYSFGIVLLQILSG 507
+ + + D +S G++ +L G
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 22/154 (14%)
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK----DKCLSWIQRLEIAIDSARGL 420
HPN++ L FL+++L G L ++L K +K I R + + A
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICA--- 139
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
LH + IVHRD+KP NILL + KL+DFG S +D GE EV GT YL P
Sbjct: 140 --LHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL--REVCGTPSYLAP 192
Query: 481 EYRSNCKVNSSG-------DVYSFGIVLLQILSG 507
E C +N + D++S G+++ +L+G
Sbjct: 193 EI-IECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 318 NLIGEGITGKVYKGKLSNNQH-VAIKHITN---EGNVETFVREVASSSHVRHPNLVALLG 373
+++G G +V + Q VAIK I EG + E+A ++HPN+VAL
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 374 YCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLW-------FLHSY 426
+LI +L G L + + K + +R D++R ++ +LH
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKG---FYTER-----DASRLIFQVLDAVKYLHDL 135
Query: 427 SEGCIVHRDIKPTNIL---LGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
IVHRD+KP N+L L + + +SDFGLSK+ D G +++ GT GY+ PE
Sbjct: 136 G---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVL 190
Query: 484 SNCKVNSSGDVYSFGIVLLQILSG 507
+ + + D +S G++ +L G
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 30/237 (12%)
Query: 296 DPGCPR--YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNE 347
D C R Y + + ++LN +G G G+V + K + + VA+K + E
Sbjct: 9 DEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK-MLKE 67
Query: 348 GNVETFVREVASSSHV-----RHPNLVALLGYCLRVD-ECFLIYELCPNGNLAEWLFGK- 400
G + R + S + H N+V LLG C + +I E C GNL+ +L K
Sbjct: 68 GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 127
Query: 401 ----------DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAK 450
L+ + + A+G+ FL S +HRD+ NILL K
Sbjct: 128 NEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVK 184
Query: 451 LSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ DFGL++ I Y + R ++ PE + DV+SFG++L +I S
Sbjct: 185 IXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 22/154 (14%)
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK----DKCLSWIQRLEIAIDSARGL 420
HPN++ L FL+++L G L ++L K +K I R + + A
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICA--- 126
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
LH + IVHRD+KP NILL + KL+DFG S +D GE EV GT YL P
Sbjct: 127 --LHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL--REVCGTPSYLAP 179
Query: 481 EYRSNCKVNSSG-------DVYSFGIVLLQILSG 507
E C +N + D++S G+++ +L+G
Sbjct: 180 EI-IECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHITNEG----NVETFVREVASSSHVRHP 366
E+ N + ++G+G G+V K K Q A+K I + T +REV + HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSY 426
N++ L +++ EL G L + + K K S I G+ ++H +
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEII-KRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 427 SEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-- 481
+ IVHRD+KP NILL + + K+ DFGLS + + GT Y+ PE
Sbjct: 141 N---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIGTAYYIAPEVL 195
Query: 482 ---YRSNCKVNSSGDVYSFGIVLLQILSG 507
Y C DV+S G++L +LSG
Sbjct: 196 RGTYDEKC------DVWSAGVILYILLSG 218
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 320 IGEGITGKVY--------KGKLSNNQHVAIKHI---TNEGNVETFVREVASSSHV-RHPN 367
+GEG G+V K K + VA+K + E ++ + E+ + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGK---------------DKCLSWIQRLEI 412
++ LLG C + ++I E GNL E+L + ++ LS +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI-DIGETYASSEV 471
A ARG+ +L S+ CI HRD+ N+L+ + K++DFGL++ I I ++
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
R ++ PE + DV+SFG++L +I +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHITNEG----NVETFVREVASSSHVRHP 366
E+ N + ++G+G G+V K K Q A+K I + T +REV + HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSY 426
N++ L +++ EL G L + + K K S I G+ ++H +
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEII-KRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 427 SEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-- 481
+ IVHRD+KP NILL + + K+ DFGLS + + GT Y+ PE
Sbjct: 141 N---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIGTAYYIAPEVL 195
Query: 482 ---YRSNCKVNSSGDVYSFGIVLLQILSG 507
Y C DV+S G++L +LSG
Sbjct: 196 RGTYDEKC------DVWSAGVILYILLSG 218
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHITNEG----NVETFVREVASSSHVRHP 366
E+ N + ++G+G G+V K K Q A+K I + T +REV + HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSY 426
N++ L +++ EL G L + + K K S I G+ ++H +
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEII-KRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 427 SEGCIVHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-- 481
+ IVHRD+KP NILL + + K+ DFGLS + + GT Y+ PE
Sbjct: 141 N---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIGTAYYIAPEVL 195
Query: 482 ---YRSNCKVNSSGDVYSFGIVLLQILSG 507
Y C DV+S G++L +LSG
Sbjct: 196 RGTYDEKC------DVWSAGVILYILLSG 218
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 297 PGCPRYTIREVHYATEKLNELNLIGEGITGKV-YKGKLSNNQHVAIKH--ITNEGNVETF 353
PG PR E L IGEG TG V + + VA+K + + E
Sbjct: 40 PGDPR----------EYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELL 89
Query: 354 VREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA 413
EV H N+V + L DE +++ E G L + + ++ Q +
Sbjct: 90 FNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIATVC 147
Query: 414 IDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRG 473
+ R L +LH+ ++HRDIK +ILL + KLSDFG + E + G
Sbjct: 148 LSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVS-KEVPKRKXLVG 203
Query: 474 TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T ++ PE S + D++S GI++++++ G+
Sbjct: 204 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 320 IGEGITGKVY--------KGKLSNNQHVAIKHI---TNEGNVETFVREVASSSHV-RHPN 367
+GEG G+V K K + VA+K + E ++ + E+ + +H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGK---------------DKCLSWIQRLEI 412
++ LLG C + ++I E GNL E+L + ++ LS +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEV 471
A ARG+ +L S+ CI HRD+ N+L+ + K++DFGL++ I + Y ++
Sbjct: 141 AYQVARGMEYLA--SKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
R ++ PE + DV+SFG++L +I +
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVR 355
Y E A EK+ +G+G G VY+G K VAIK + ++ +
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 68
Query: 356 EVASSSHVRHPN---LVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCL-- 404
+ +S ++ N +V LLG + +I EL G+L +L + L
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 405 -SWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
S + +++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIY 183
Query: 464 ET-YASSEVRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
ET Y +G ++ PE + + DV+SFG+VL +I
Sbjct: 184 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 22/154 (14%)
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK----DKCLSWIQRLEIAIDSARGL 420
HPN++ L FL+++L G L ++L K +K I R + + A
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICA--- 139
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
LH + IVHRD+KP NILL + KL+DFG S +D GE S V GT YL P
Sbjct: 140 --LHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS--VCGTPSYLAP 192
Query: 481 EYRSNCKVNSSG-------DVYSFGIVLLQILSG 507
E C +N + D++S G+++ +L+G
Sbjct: 193 EI-IECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 318 NLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETF------VREVASSSHVRHPNLVAL 371
+ +G G GKV G+ H I N + + RE+ + RHP+++ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSW-IQRLEIAIDSARGLWFLHSYSEGC 430
+ F++ E G L +++ + +RL I SA H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH-----M 131
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRS-NCKVN 489
+VHRD+KP N+LL + AK++DFGLS ++ GE +S G+ Y PE S
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPEVISGRLYAG 189
Query: 490 SSGDVYSFGIVLLQILSG 507
D++S G++L +L G
Sbjct: 190 PEVDIWSCGVILYALLCG 207
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 320 IGEGITGKVY--------KGKLSNNQHVAIKHI---TNEGNVETFVREVASSSHV-RHPN 367
+GEG G+V K K + VA+K + E ++ + E+ + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGK---------------DKCLSWIQRLEI 412
++ LLG C + ++I E GNL E+L + ++ LS +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEV 471
A ARG+ +L S+ CI HRD+ N+L+ + K++DFGL++ I + Y ++
Sbjct: 156 AYQVARGMEYLA--SKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
R ++ PE + DV+SFG++L +I +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVR 355
Y E A EK+ +G+G G VY+G K VAIK + ++ +
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 74
Query: 356 EVASSSHVRHPN---LVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCL-- 404
+ +S ++ N +V LLG + +I EL G+L +L + L
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 134
Query: 405 -SWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
S + +++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIY 189
Query: 464 ET-YASSEVRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
ET Y +G ++ PE + + DV+SFG+VL +I
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHV-AIKHI---TNEGNVETFVREVASSSHVRHPN 367
E +L IG+G G+V+KG + Q V AIK I E +E +E+ S P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+ G L+ + ++I E G+ + L + L Q I + +GL +LHS
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEK 124
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCK 487
+ +HRDIK N+LL + E KL+DFG++ + + ++ V GT ++ PE
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSA 180
Query: 488 VNSSGDVYSFGIVLLQILSGK 508
+S D++S GI +++ G+
Sbjct: 181 YDSKADIWSLGITAIELARGE 201
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 308 HYATEKLNELNLIGEGITGKVY--------KGKLSNNQHVAIKHITN---EGNVETFVRE 356
+ +KL +GEG G+V K K VA+K + + E ++ V E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 357 VASSSHV-RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK--------------- 400
+ + +H N++ LLG C + ++I GNL E+L +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 401 DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
++ +++ + ARG+ +L S + CI HRD+ N+L+ N K++DFGL++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLAS--QKCI-HRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 461 DIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ + Y ++ R ++ PE + DV+SFG+++ +I +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHV-AIKHI---TNEGNVETFVREVASSSHVRHPN 367
E +L IG+G G+V+KG + Q V AIK I E +E +E+ S P
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+ G L+ + ++I E G+ + L + L Q I + +GL +LHS
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEK 144
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCK 487
+ +HRDIK N+LL + E KL+DFG++ + + ++ V GT ++ PE
Sbjct: 145 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSA 200
Query: 488 VNSSGDVYSFGIVLLQILSGK 508
+S D++S GI +++ G+
Sbjct: 201 YDSKADIWSLGITAIELARGE 221
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 31/206 (15%)
Query: 318 NLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETF------VREVASSSHVRHPNLVAL 371
+ +G G GKV G+ H I N + + RE+ + RHP+++ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSW-IQRLEIAIDSARGLWFLHSYSEGC 430
+ F++ E G L +++ + +RL I SA H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH-----M 131
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGE---------TYASSEVRGTFGYLDPE 481
+VHRD+KP N+LL + AK++DFGLS ++ GE YA+ EV Y PE
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPE 191
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSG 507
D++S G++L +L G
Sbjct: 192 V----------DIWSCGVILYALLCG 207
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 320 IGEGITGKVY--------KGKLSNNQHVAIKHI---TNEGNVETFVREVASSSHV-RHPN 367
+GEG G+V K K + VA+K + E ++ + E+ + +H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGK---------------DKCLSWIQRLEI 412
++ LLG C + ++I E GNL E+L + ++ LS +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEV 471
A ARG+ +L S+ CI HRD+ N+L+ + K++DFGL++ I + Y ++
Sbjct: 148 AYQVARGMEYLA--SKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
R ++ PE + DV+SFG++L +I +
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVR 355
Y E A EK+ +G+G G VY+G K VAIK + ++ +
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 67
Query: 356 EVASSSHVRHPN---LVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCL-- 404
+ +S ++ N +V LLG + +I EL G+L +L + L
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 405 -SWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
S + +++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIY 182
Query: 464 ET-YASSEVRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
ET Y +G ++ PE + + DV+SFG+VL +I
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 320 IGEGITGKVY--------KGKLSNNQHVAIKHI---TNEGNVETFVREVASSSHV-RHPN 367
+GEG G+V K K + VA+K + E ++ + E+ + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGK---------------DKCLSWIQRLEI 412
++ LLG C + ++I E GNL E+L + ++ LS +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEV 471
A ARG+ +L S+ CI HRD+ N+L+ + K++DFGL++ I + Y ++
Sbjct: 156 AYQVARGMEYLA--SKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
R ++ PE + DV+SFG++L +I +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 36/244 (14%)
Query: 291 GVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVY--------KGKLSNNQHVAIK 342
G + + P PR+ + ++L +GEG G+V K K + VA+K
Sbjct: 1 GSEYELPEDPRWEL-----PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK 55
Query: 343 HI---TNEGNVETFVREVASSSHV-RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLF 398
+ E ++ + E+ + +H N++ LLG C + ++I E GNL E+L
Sbjct: 56 MLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 115
Query: 399 GK---------------DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL 443
+ ++ LS + A ARG+ +L S+ CI HRD+ N+L+
Sbjct: 116 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA--SKKCI-HRDLAARNVLV 172
Query: 444 GPNFEAKLSDFGLSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLL 502
+ K++DFGL++ I + Y ++ R ++ PE + DV+SFG++L
Sbjct: 173 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 232
Query: 503 QILS 506
+I +
Sbjct: 233 EIFT 236
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVR 355
Y E A EK+ +G+G G VY+G K VAIK + ++ +
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 67
Query: 356 EVASSSHVRHPN---LVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCL-- 404
+ +S ++ N +V LLG + +I EL G+L +L + L
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 405 -SWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
S + +++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIY 182
Query: 464 ET-YASSEVRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
ET Y +G ++ PE + + DV+SFG+VL +I
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 320 IGEGITGKVY--------KGKLSNNQHVAIKHI---TNEGNVETFVREVASSSHV-RHPN 367
+GEG G+V K K + VA+K + E ++ + E+ + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGK---------------DKCLSWIQRLEI 412
++ LLG C + ++I E GNL E+L + ++ LS +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEV 471
A ARG+ +L S+ CI HRD+ N+L+ + K++DFGL++ I + Y ++
Sbjct: 156 AYQVARGMEYLA--SKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
R ++ PE + DV+SFG++L +I +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 30/226 (13%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVR 355
Y E A EK+ +G+G G VY+G K VAIK + ++ +
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 68
Query: 356 EVASSSHVRHPN---LVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCL-- 404
+ +S ++ N +V LLG + +I EL G+L +L + L
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 405 -SWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
S + +++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR--DIX 183
Query: 464 ETYASSEVRGTFG-----YLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
ET +G G ++ PE + + DV+SFG+VL +I
Sbjct: 184 ET--DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 36/217 (16%)
Query: 320 IGEGITGKVYKGKLS-NNQHVAIKHI---TNEGNVETFVREVASSSHVRHPNLVALLGYC 375
+G G G V++ K ++ + AIK I E E +REV + + + HP +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 376 LRVDEC------------FLIYELCPNGNLAEWLFGKDKC-LSWIQR---LEIAIDSARG 419
L + ++ +LC NL +W+ G+ C + +R L I + A
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR--CTIEERERSVCLHIFLQIAEA 130
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGE----------TYASS 469
+ FLHS ++HRD+KP+NI + K+ DFGL +D E YA
Sbjct: 131 VEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARH 187
Query: 470 EVR-GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
+ GT Y+ PE + D++S G++L ++L
Sbjct: 188 TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 320 IGEGITGKVY--------KGKLSNNQHVAIKHI---TNEGNVETFVREVASSSHV-RHPN 367
+GEG G+V K K + VA+K + E ++ + E+ + +H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGK---------------DKCLSWIQRLEI 412
++ LLG C + ++I E GNL E+L + ++ LS +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEV 471
A ARG+ +L S+ CI HRD+ N+L+ + K++DFGL++ I + Y ++
Sbjct: 149 AYQVARGMEYLA--SKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
R ++ PE + DV+SFG++L +I +
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 311 TEKLNELNLIGEGITGKVY--KGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHV 363
+++ + +G G G+V K KL+ + AIK +T N + EVA +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAER-AIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFL 423
HPN++ L + +L+ E+ G L + + + K S + I G +L
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-FSEVDAAVIMKQVLSGTTYL 137
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFE---AKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
H ++ IVHRD+KP N+LL K+ DFGLS ++G E GT Y+ P
Sbjct: 138 HKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM--KERLGTAYYIAP 192
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E K + DV+S G++L +L G
Sbjct: 193 EVLRK-KYDEKCDVWSCGVILYILLCG 218
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 311 TEKLNELNLIGEGITGKVY--KGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHV 363
+++ + +G G G+V K KL+ + AIK +T N + EVA +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAER-AIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFL 423
HPN++ L + +L+ E+ G L + + + K S + I G +L
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-FSEVDAAVIMKQVLSGTTYL 120
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFE---AKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
H ++ IVHRD+KP N+LL K+ DFGLS ++G E GT Y+ P
Sbjct: 121 HKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM--KERLGTAYYIAP 175
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E K + DV+S G++L +L G
Sbjct: 176 EVLRK-KYDEKCDVWSCGVILYILLCG 201
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 30/201 (14%)
Query: 320 IGEGITGKVYKG-KLSNNQHVAIKHITN--------EGNVETFVREVASSSHVRHPNLVA 370
+GEG GKV + Q VA+K I +G +E RE++ +RHP+++
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE---REISYLRLLRHPHIIK 78
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDK-----CLSWIQRLEIAIDSARGLWFLHS 425
L DE ++ E N L +++ +DK + Q++ A++ + H
Sbjct: 79 LYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVE------YCHR 131
Query: 426 YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRS- 484
+ IVHRD+KP N+LL + K++DFGLS ++ G +S G+ Y PE S
Sbjct: 132 HK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISG 186
Query: 485 NCKVNSSGDVYSFGIVLLQIL 505
DV+S G++L +L
Sbjct: 187 KLYAGPEVDVWSCGVILYVML 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 30/201 (14%)
Query: 320 IGEGITGKVYKG-KLSNNQHVAIKHITN--------EGNVETFVREVASSSHVRHPNLVA 370
+GEG GKV + Q VA+K I +G +E RE++ +RHP+++
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE---REISYLRLLRHPHIIK 68
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDK-----CLSWIQRLEIAIDSARGLWFLHS 425
L DE ++ E N L +++ +DK + Q++ A++ + H
Sbjct: 69 LYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVE------YCHR 121
Query: 426 YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRS- 484
+ IVHRD+KP N+LL + K++DFGLS ++ G +S G+ Y PE S
Sbjct: 122 HK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISG 176
Query: 485 NCKVNSSGDVYSFGIVLLQIL 505
DV+S G++L +L
Sbjct: 177 KLYAGPEVDVWSCGVILYVML 197
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 27/258 (10%)
Query: 320 IGEGITGKVY-KGKLSNNQHVAIKHITNEGN---VETFVREVASSSHVRHPNLVALLGYC 375
+G G G V+ + S+ IK I + + +E E+ + HPN++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 376 LRVDECFLIYELCPNGNLAEWLF---GKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIV 432
+++ E C G L E + + K LS E+ L + HS +V
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VV 146
Query: 433 HRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVN 489
H+D+KP NIL P+ K+ DFGL+++ E S+ GT Y+ PE V
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE--HSTNAAGTALYMAPEVFKR-DVT 203
Query: 490 SSGDVYSFGIVLLQILSGKKAKVLTRAGSALELADPKL---DREYSIEAFDLTLQ----L 542
D++S G+V+ +L+G L G++LE K + Y++E LT Q L
Sbjct: 204 FKCDIWSAGVVMYFLLTG----CLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLL 259
Query: 543 ALSCTALTHQRPPMEQVF 560
T +RP QV
Sbjct: 260 KQMLTKDPERRPSAAQVL 277
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 308 HYATEKLNELNLIGEGITGKVY--------KGKLSNNQHVAIKHITN---EGNVETFVRE 356
+ +KL +GEG G+V K K VA+K + + E ++ V E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 357 VASSSHV-RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGK--------------- 400
+ + +H N++ LLG C + ++I GNL E+L +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 401 DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI 460
++ +++ + ARG+ +L S + CI HRD+ N+L+ N K++DFGL++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLAS--QKCI-HRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 461 DIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ + Y ++ R ++ PE + DV+SFG+++ +I +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 344 ITNEGNVETFVREVASSSHVR----HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-- 397
+ NE N E+ + ++V +P +V ++G C + L+ E+ G L ++L
Sbjct: 46 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 104
Query: 398 --FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFG 455
KDK + +E+ + G+ +L E VHRD+ N+LL AK+SDFG
Sbjct: 105 NRHVKDKNI-----IELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFG 156
Query: 456 LSKVIDIGETYASSEVRGTF--GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
LSK + E ++ G + + PE + K +S DV+SFG+++ + S
Sbjct: 157 LSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 320 IGEGITGKVY--------KGKLSNNQHVAIKHI---TNEGNVETFVREVASSSHV-RHPN 367
+GEG G+V K K + VA+K + E ++ + E+ + +H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGK---------------DKCLSWIQRLEI 412
++ LLG C + ++I E GNL E+L + ++ LS +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEV 471
A ARG+ +L S+ CI HRD+ N+L+ + K++DFGL++ I + Y ++
Sbjct: 197 AYQVARGMEYLA--SKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
R ++ PE + DV+SFG++L +I +
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 30/201 (14%)
Query: 320 IGEGITGKVYKG-KLSNNQHVAIKHITN--------EGNVETFVREVASSSHVRHPNLVA 370
+GEG GKV + Q VA+K I +G +E RE++ +RHP+++
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE---REISYLRLLRHPHIIK 77
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDK-----CLSWIQRLEIAIDSARGLWFLHS 425
L DE ++ E N L +++ +DK + Q++ A++ + H
Sbjct: 78 LYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVE------YCHR 130
Query: 426 YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRS- 484
+ IVHRD+KP N+LL + K++DFGLS ++ G +S G+ Y PE S
Sbjct: 131 HK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISG 185
Query: 485 NCKVNSSGDVYSFGIVLLQIL 505
DV+S G++L +L
Sbjct: 186 KLYAGPEVDVWSCGVILYVML 206
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 30/201 (14%)
Query: 320 IGEGITGKVYKG-KLSNNQHVAIKHITN--------EGNVETFVREVASSSHVRHPNLVA 370
+GEG GKV + Q VA+K I +G +E RE++ +RHP+++
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE---REISYLRLLRHPHIIK 72
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDK-----CLSWIQRLEIAIDSARGLWFLHS 425
L DE ++ E N L +++ +DK + Q++ A++ + H
Sbjct: 73 LYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVE------YCHR 125
Query: 426 YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRS- 484
+ IVHRD+KP N+LL + K++DFGLS ++ G +S G+ Y PE S
Sbjct: 126 HK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISG 180
Query: 485 NCKVNSSGDVYSFGIVLLQIL 505
DV+S G++L +L
Sbjct: 181 KLYAGPEVDVWSCGVILYVML 201
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 314 LNELNLIGEGITGKV--YKGKLSNN---QHVAIKHITNEGNVET---FVREVASSSHVRH 365
L ++ +GEG GKV Y +N+ + VA+K + + + RE+ + H
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYH 69
Query: 366 PNLVALLGYCLRVDE--CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFL 423
++V G C E L+ E P G+L ++L C+ Q L A G+ +L
Sbjct: 70 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQICEGMAYL 127
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDP 480
H+ +HR + N+LL + K+ DFGL+K + G Y G F Y P
Sbjct: 128 HAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-P 183
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILS 506
E CK + DV+SFG+ L ++L+
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHV-AIKHI---TNEGNVETFVREVASSSHVRHPN 367
E +L IG+G G+V+KG + Q V AIK I E +E +E+ S P
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+ G L+ + ++I E G+ + L + L Q I + +GL +LHS
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEK 139
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCK 487
+ +HRDIK N+LL + E KL+DFG++ + + + V GT ++ PE
Sbjct: 140 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSA 195
Query: 488 VNSSGDVYSFGIVLLQILSGK 508
+S D++S GI +++ G+
Sbjct: 196 YDSKADIWSLGITAIELARGE 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHV-AIKHI---TNEGNVETFVREVASSSHVRHPN 367
E +L IG+G G+V+KG + Q V AIK I E +E +E+ S P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+ G L+ + ++I E G+ + L + L Q I + +GL +LHS
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEK 124
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCK 487
+ +HRDIK N+LL + E KL+DFG++ + + + V GT ++ PE
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSA 180
Query: 488 VNSSGDVYSFGIVLLQILSGK 508
+S D++S GI +++ G+
Sbjct: 181 YDSKADIWSLGITAIELARGE 201
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 314 LNELNLIGEGITGKV--YKGKLSNN---QHVAIKHITNEGNVET---FVREVASSSHVRH 365
L ++ +GEG GKV Y +N+ + VA+K + + + RE+ + H
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYH 70
Query: 366 PNLVALLGYCLRVDE--CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFL 423
++V G C E L+ E P G+L ++L C+ Q L A G+ +L
Sbjct: 71 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQICEGMAYL 128
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDP 480
H+ +HR + N+LL + K+ DFGL+K + G Y G F Y P
Sbjct: 129 HAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-P 184
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILS 506
E CK + DV+SFG+ L ++L+
Sbjct: 185 ECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 30/228 (13%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKGKLSN------NQHVAIKHITNEGNVET--- 352
Y E + EK+ L +G+G G VY+G + VA+K + ++
Sbjct: 7 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLF--------GKDKCL 404
F+ E + ++V LLG + ++ EL +G+L +L +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 405 SWIQRL-EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
+Q + ++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR--DIX 181
Query: 464 ETYASSEVRGTFG-----YLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
ET +G G ++ PE + +S D++SFG+VL +I S
Sbjct: 182 ET--DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVR 355
Y E A EK+ +G+G G VY+G K VAIK + ++ +
Sbjct: 37 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 96
Query: 356 EVASSSHVRHPN---LVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCL-- 404
+ +S ++ N +V LLG + +I EL G+L +L + L
Sbjct: 97 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 156
Query: 405 -SWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
S + +++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI
Sbjct: 157 PSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIY 211
Query: 464 ET-YASSEVRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
ET Y +G ++ PE + + DV+SFG+VL +I
Sbjct: 212 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 100/234 (42%), Gaps = 35/234 (14%)
Query: 280 SNPPAKITSFKGVQLKDPGC------PRYTIREVHYATEKLNELNLIGEGITGKVYKGKL 333
SNP AK + F +++ G R+ EV YA + L + K L
Sbjct: 31 SNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQK-------------KAIL 77
Query: 334 SNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNL 393
+ KHI +E NV +V+HP LV L D+ + + + G L
Sbjct: 78 KKKEE---KHIMSERNVLL--------KNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL 126
Query: 394 AEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSD 453
+ +++C + A + A L +LHS + IV+RD+KP NILL L+D
Sbjct: 127 F-YHLQRERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTD 182
Query: 454 FGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
FGL K +I +S GT YL PE + + D + G VL ++L G
Sbjct: 183 FGLCKE-NIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 296 DPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKL-SNNQHVAIKH--ITNEGNVET 352
DPG PR L+ IGEG TG V + S+ + VA+K + + E
Sbjct: 14 DPGDPR----------SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL 63
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI 412
EV +H N+V + L DE +++ E G L + + I + +
Sbjct: 64 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL 123
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
A+ A L LH+ ++HRDIK +ILL + KLSDFG + E +
Sbjct: 124 AVLQA--LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLV 177
Query: 473 GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
GT ++ PE S D++S GI++++++ G+
Sbjct: 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVREVAS 359
E A EK+ +G+G G VY+G K VAIK + ++ + +
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 360 SSHVRHPN---LVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCL---SWI 407
+S ++ N +V LLG + +I EL G+L +L + L S
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 129
Query: 408 QRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-Y 466
+ +++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI ET Y
Sbjct: 130 KMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDY 184
Query: 467 ASSEVRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
+G ++ PE + + DV+SFG+VL +I
Sbjct: 185 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 12/195 (6%)
Query: 319 LIGE-GITGKVYKGKLSNNQHVAIKHITN---EGNVETFVREVASSSHVRHPNLVALLGY 374
+IGE G GKVYK + +A + + E +E ++ E+ + HPN+V LL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 375 CLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHR 434
+ +++ E C G + + ++ L+ Q + + L +LH + I+HR
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHR 132
Query: 435 DIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY-----RSNCKVN 489
D+K NIL + + KL+DFG+S GT ++ PE + +
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 192
Query: 490 SSGDVYSFGIVLLQI 504
DV+S GI L+++
Sbjct: 193 YKADVWSLGITLIEM 207
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 296 DPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKL-SNNQHVAIKH--ITNEGNVET 352
DPG PR L+ IGEG TG V + S+ + VA+K + + E
Sbjct: 23 DPGDPR----------SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL 72
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI 412
EV +H N+V + L DE +++ E G L + + I + +
Sbjct: 73 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL 132
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
A+ A L LH+ ++HRDIK +ILL + KLSDFG + E +
Sbjct: 133 AVLQA--LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLV 186
Query: 473 GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
GT ++ PE S D++S GI++++++ G+
Sbjct: 187 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 222
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 296 DPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKL-SNNQHVAIKH--ITNEGNVET 352
DPG PR L+ IGEG TG V + S+ + VA+K + + E
Sbjct: 18 DPGDPR----------SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL 67
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI 412
EV +H N+V + L DE +++ E G L + + I + +
Sbjct: 68 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL 127
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
A+ A L LH+ ++HRDIK +ILL + KLSDFG + E +
Sbjct: 128 AVLQA--LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLV 181
Query: 473 GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
GT ++ PE S D++S GI++++++ G+
Sbjct: 182 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 217
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 30/237 (12%)
Query: 296 DPGCPR--YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNE 347
D C R Y + + ++LN +G G G+V + K + + VA+K + E
Sbjct: 9 DEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK-MLKE 67
Query: 348 GNVETFVREVASSSHV-----RHPNLVALLGYCLRVD-ECFLIYELCPNGNLAEWLFGK- 400
G + R + S + H N+V LLG C + +I E C GNL+ +L K
Sbjct: 68 GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 127
Query: 401 ----------DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAK 450
L+ + + A+G+ FL S +HRD+ NILL K
Sbjct: 128 NEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVK 184
Query: 451 LSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ DFGL++ I Y + R ++ PE + DV+SFG++L +I S
Sbjct: 185 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 26/220 (11%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVREVAS 359
E A EK+ +G+G G VY+G K VAIK + ++ + +
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 360 SSHVRHPN---LVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCL---SWI 407
+S ++ N +V LLG + +I EL G+L +L + L S
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 408 QRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-Y 466
+ +++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI ET Y
Sbjct: 126 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDY 180
Query: 467 ASSEVRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
+G ++ PE + + DV+SFG+VL +I
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 296 DPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKL-SNNQHVAIKH--ITNEGNVET 352
DPG PR L+ IGEG TG V + S+ + VA+K + + E
Sbjct: 25 DPGDPR----------SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL 74
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI 412
EV +H N+V + L DE +++ E G L + + I + +
Sbjct: 75 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL 134
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
A+ A L LH+ ++HRDIK +ILL + KLSDFG + E +
Sbjct: 135 AVLQA--LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLV 188
Query: 473 GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
GT ++ PE S D++S GI++++++ G+
Sbjct: 189 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 224
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVR-EVASSSHVRHPNLVA 370
+++ + IG+G G+V+ GK + VA+K F E+ + +RH N++
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILG 95
Query: 371 LLGYCLR----VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHS- 425
+ ++ + +LI + NG+L ++L K L L++A S GL LH+
Sbjct: 96 FIAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCHLHTE 153
Query: 426 ----YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSK--VIDIGETYASSEVR-GTFGYL 478
+ I HRD+K NIL+ N ++D GL+ + D E R GT Y+
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYM 213
Query: 479 DPEY------RSNCKVNSSGDVYSFGIVLLQI 504
PE R++ + D+YSFG++L ++
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 298 GCPRYTIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIK---HITNEGNVETF 353
P + + TE L ++ ++G G G VYKG + + ++V I + E
Sbjct: 4 AAPNQALLRILKETE-LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKA 62
Query: 354 VREVASSSHVR----HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKC 403
+E+ ++V P + LLG CL L+ +L P G L + + G
Sbjct: 63 NKEILDEAYVMAGVGSPYVSRLLGICL-TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDL 121
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
L+W ++ A+G+ +L +VHRD+ N+L+ K++DFGL++++DI
Sbjct: 122 LNWCMQI------AKGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDID 172
Query: 464 ET-YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
ET Y + + ++ E + DV+S+G+ + ++++
Sbjct: 173 ETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 38/222 (17%)
Query: 305 REVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVR 364
RE+ Y K+ IG G G V++ KL + VAIK + + + RE+ V+
Sbjct: 38 REIAYTNCKV-----IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN--RELQIMRIVK 90
Query: 365 HPNLVALLGYCL----RVDECFL--IYELCPNGNL-AEWLFGKDKCLSWIQRLEIAI-DS 416
HPN+V L + + DE FL + E P A + K K + +++ +
Sbjct: 91 HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL 150
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSDFGLSKVIDIGET---------Y 466
R L ++HS I HRDIKP N+LL P KL DFG +K++ GE Y
Sbjct: 151 LRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYY 207
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
+ E+ FG + Y +N D++S G V+ +++ G+
Sbjct: 208 RAPEL--IFGATN--YTTNI------DIWSTGCVMAELMQGQ 239
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVREVAS 359
E A EK+ +G+G G VY+G K VAIK + ++ + +
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 360 SSHVRHPN---LVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCL---SWI 407
+S ++ N +V LLG + +I EL G+L +L + L S
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 408 QRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA 467
+ +++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI ET
Sbjct: 124 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDX 178
Query: 468 SSEVRGTFG-----YLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
+G G ++ PE + + DV+SFG+VL +I
Sbjct: 179 XR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 26/224 (11%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVR 355
Y E A EK+ +G+G G VY+G K VAIK + ++ +
Sbjct: 2 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 61
Query: 356 EVASSSHVRHPN---LVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCL-- 404
+ +S ++ N +V LLG + +I EL G+L +L + L
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 405 -SWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
S + +++A + A G+ +L++ VHRD+ N + +F K+ DFG+++ DI
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTR--DIY 176
Query: 464 ET-YASSEVRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
ET Y +G ++ PE + + DV+SFG+VL +I
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 37 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT 83
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +L+ L +L + L K +
Sbjct: 84 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLYKLL--KTQH 140
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 141 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 197
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 198 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 17 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT 63
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 64 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 120
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 121 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPD 177
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 178 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 26/222 (11%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGKLSN------NQHVAIKHITNEGNVET---FVRE 356
E + EK+ L +G+G G VY+G + VA+K + ++ F+ E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 357 VASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLF--------GKDKCLSWIQ 408
+ ++V LLG + ++ EL +G+L +L + +Q
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 409 RL-EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-Y 466
+ ++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI ET Y
Sbjct: 131 EMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETAY 185
Query: 467 ASSEVRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+G ++ PE + +S D++SFG+VL +I S
Sbjct: 186 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 26/222 (11%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGKLSN------NQHVAIKHITNEGNVET---FVRE 356
E + EK+ L +G+G G VY+G + VA+K + ++ F+ E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 357 VASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLF--------GKDKCLSWIQ 408
+ ++V LLG + ++ EL +G+L +L + +Q
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 409 RL-EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-Y 466
+ ++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI ET Y
Sbjct: 131 EMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDY 185
Query: 467 ASSEVRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+G ++ PE + +S D++SFG+VL +I S
Sbjct: 186 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 62
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 109
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 169
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGKLSN------NQHVAIKHITNEGNVET---FVRE 356
E + EK+ L +G+G G VY+G + VA+K + ++ F+ E
Sbjct: 8 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 67
Query: 357 VASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLF--------GKDKCLSWIQ 408
+ ++V LLG + ++ EL +G+L +L + +Q
Sbjct: 68 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 127
Query: 409 RL-EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA 467
+ ++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI ET
Sbjct: 128 EMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXET-- 180
Query: 468 SSEVRGTFG-----YLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+G G ++ PE + +S D++SFG+VL +I S
Sbjct: 181 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 17 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT 63
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 64 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 120
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 121 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 177
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 178 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 26/218 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSN------NQHVAIKHITNEGNVET---FVREVASS 360
+ EK+ L +G+G G VY+G + VA+K + ++ F+ E +
Sbjct: 14 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 73
Query: 361 SHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLF--------GKDKCLSWIQRL-E 411
++V LLG + ++ EL +G+L +L + +Q + +
Sbjct: 74 KGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 133
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSE 470
+A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI ET Y
Sbjct: 134 MAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKG 188
Query: 471 VRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+G ++ PE + +S D++SFG+VL +I S
Sbjct: 189 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 21 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 67
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 68 YXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 124
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 125 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 181
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 108
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 28/214 (13%)
Query: 333 LSNNQHVAIKHIT--NEGNVETFVREVASSSHVRHPNLVALLGYCLR----VDECFLIYE 386
L + A+K I + + E RE HPN++ L+ YCLR E +L+
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110
Query: 387 LCPNGNL---AEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL 443
G L E L K L+ Q L + + RGL +H+ HRD+KPTNILL
Sbjct: 111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILL 167
Query: 444 GPNFEAKLSDFGL----------SKVIDIGETYASSEVRGTFGYLDPEY---RSNCKVNS 490
G + L D G S+ + +A+ R T Y PE +S+C ++
Sbjct: 168 GDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ--RCTISYRAPELFSVQSHCVIDE 225
Query: 491 SGDVYSFGIVLLQILSGKKA-KVLTRAGSALELA 523
DV+S G VL ++ G+ ++ + G ++ LA
Sbjct: 226 RTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA 259
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHIT----NEGNVETFVREVASS 360
++H +L L IG+G KV + + + VA+K I N +++ REV
Sbjct: 3 DLHIGNYRL--LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIM 60
Query: 361 SHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL 420
+ HPN+V L +L+ E G + ++L W++ E + +
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH----GWMKEKEARAKFRQIV 116
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+ + IVHRD+K N+LL + K++DFG S G + G+ Y P
Sbjct: 117 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAP 174
Query: 481 EYRSNCKVNSSG-DVYSFGIVLLQILSG 507
E K + DV+S G++L ++SG
Sbjct: 175 ELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 296 DPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKL-SNNQHVAIKH--ITNEGNVET 352
DPG PR L+ IGEG TG V + S+ + VA+K + + E
Sbjct: 68 DPGDPR----------SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL 117
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI 412
EV +H N+V + L DE +++ E G L + + I + +
Sbjct: 118 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL 177
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
A+ A L LH+ ++HRDIK +ILL + KLSDFG + E +
Sbjct: 178 AVLQA--LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLV 231
Query: 473 GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
GT ++ PE S D++S GI++++++ G+
Sbjct: 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 267
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 17 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT 63
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 64 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 120
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 121 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 177
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 178 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 306 EVHYATEKLNELNLIGEGITGKVYKGKLSN------NQHVAIKHITNEGNVET---FVRE 356
E + EK+ L +G+G G VY+G + VA+K + ++ F+ E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 357 VASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLF--------GKDKCLSWIQ 408
+ ++V LLG + ++ EL +G+L +L + +Q
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 409 RL-EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA 467
+ ++A + A G+ +L++ VHRD+ N ++ +F K+ DFG+++ DI ET
Sbjct: 131 EMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXET-- 183
Query: 468 SSEVRGTFG-----YLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+G G ++ PE + +S D++SFG+VL +I S
Sbjct: 184 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 325 TGKVYKGKLS----NNQHVAIKHI---TNEGNVETFVREVASSSHVRHPNLVALLGYCLR 377
TG K KL+ + VAIK + T ++ E+ + ++RH ++ L
Sbjct: 20 TGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLET 79
Query: 378 VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIK 437
++ F++ E CP G L +++ +D+ LS + + + ++HS HRD+K
Sbjct: 80 ANKIFMVLEYCPGGELFDYIISQDR-LSEEETRVVFRQIVSAVAYVHSQG---YAHRDLK 135
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY-RSNCKVNSSGDVYS 496
P N+L + KL DFGL + Y G+ Y PE + + S DV+S
Sbjct: 136 PENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWS 195
Query: 497 FGIVLLQILSG 507
GI+L ++ G
Sbjct: 196 MGILLYVLMCG 206
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 108
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 21 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 67
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 68 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 124
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 125 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 181
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 32/206 (15%)
Query: 319 LIGEGITGKVY--KGKLSNNQ----HVAIKHITNEGNVETFVREVASSSHVRHPNLVALL 372
++G+G G+V K K++ + ++ + + + + E+ +REV + HPN++ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 373 GYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIV 432
+ +L+ E+ G L + + + K S + I G+ ++H + IV
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMH---KNKIV 148
Query: 433 HRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVR---GTFGYLDPE----- 481
HRD+KP N+LL + ++ DFGLS + AS +++ GT Y+ PE
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHFE-----ASKKMKDKIGTAYYIAPEVLHGT 203
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSG 507
Y C DV+S G++L +LSG
Sbjct: 204 YDEKC------DVWSTGVILYILLSG 223
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 108
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 108
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXG 168
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 17 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT 63
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 64 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 120
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 121 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 177
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 178 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 26/226 (11%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKGKLSN------NQHVAIKHITNEGNVET--- 352
Y E + EK+ L +G+G G VY+G + VA+K + ++
Sbjct: 8 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 67
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLF--------GKDKCL 404
F+ E + ++V LLG + ++ EL +G+L +L +
Sbjct: 68 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 127
Query: 405 SWIQRL-EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
+Q + ++A + A G+ +L++ VHR++ N ++ +F K+ DFG+++ DI
Sbjct: 128 PTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTR--DIY 182
Query: 464 ET-YASSEVRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
ET Y +G ++ PE + +S D++SFG+VL +I S
Sbjct: 183 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 26/170 (15%)
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDK-----C 403
NVET E+ + HP ++ + + ++ +++ EL G L + + G + C
Sbjct: 61 NVET---EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 116
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFE---AKLSDFGLSKVI 460
+ ++ +A+ +LH E I+HRD+KP N+LL E K++DFG SK+
Sbjct: 117 KLYFYQMLLAVQ------YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 166
Query: 461 DIGETYASSEVRGTFGYLDPEYRSNCKV---NSSGDVYSFGIVLLQILSG 507
+GET + GT YL PE + N + D +S G++L LSG
Sbjct: 167 -LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 28/236 (11%)
Query: 283 PAKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAI 341
P ++ KG Q D G PRYT +L IGEG G V VAI
Sbjct: 28 PGEVEMVKG-QPFDVG-PRYT------------QLQYIGEGAYGMVSSAYDHVRKTRVAI 73
Query: 342 KHIT---NEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAE--- 395
K I+ ++ + +RE+ RH N++ + LR + ++ +L E
Sbjct: 74 KKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD-ILRASTLEAMRDVYIVQDLMETDL 132
Query: 396 WLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFG 455
+ K + LS RGL ++HS ++HRD+KP+N+L+ + K+ DFG
Sbjct: 133 YKLLKSQQLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFG 189
Query: 456 LSKVIDIGETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
L+++ D + +E T Y PE N K S D++S G +L ++LS +
Sbjct: 190 LARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 26/170 (15%)
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDK-----C 403
NVET E+ + HP ++ + + ++ +++ EL G L + + G + C
Sbjct: 61 NVET---EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 116
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFE---AKLSDFGLSKVI 460
+ ++ +A+ +LH E I+HRD+KP N+LL E K++DFG SK+
Sbjct: 117 KLYFYQMLLAVQ------YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 166
Query: 461 DIGETYASSEVRGTFGYLDPEYRSNCKV---NSSGDVYSFGIVLLQILSG 507
+GET + GT YL PE + N + D +S G++L LSG
Sbjct: 167 -LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 26/170 (15%)
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDK-----C 403
NVET E+ + HP ++ + + ++ +++ EL G L + + G + C
Sbjct: 61 NVET---EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 116
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFE---AKLSDFGLSKVI 460
+ ++ +A+ +LH E I+HRD+KP N+LL E K++DFG SK+
Sbjct: 117 KLYFYQMLLAVQ------YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 166
Query: 461 DIGETYASSEVRGTFGYLDPEYRSNCKV---NSSGDVYSFGIVLLQILSG 507
+GET + GT YL PE + N + D +S G++L LSG
Sbjct: 167 -LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 32/206 (15%)
Query: 319 LIGEGITGKVY--KGKLSNNQ----HVAIKHITNEGNVETFVREVASSSHVRHPNLVALL 372
++G+G G+V K K++ + ++ + + + + E+ +REV + HPN++ L
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 373 GYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIV 432
+ +L+ E+ G L + + + K S + I G+ ++H + IV
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMH---KNKIV 171
Query: 433 HRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVR---GTFGYLDPE----- 481
HRD+KP N+LL + ++ DFGLS + AS +++ GT Y+ PE
Sbjct: 172 HRDLKPENLLLESKSKDANIRIIDFGLSTHFE-----ASKKMKDKIGTAYYIAPEVLHGT 226
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSG 507
Y C DV+S G++L +LSG
Sbjct: 227 YDEKC------DVWSTGVILYILLSG 246
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 26/170 (15%)
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDK-----C 403
NVET E+ + HP ++ + + ++ +++ EL G L + + G + C
Sbjct: 60 NVET---EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 115
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFE---AKLSDFGLSKVI 460
+ ++ +A+ +LH E I+HRD+KP N+LL E K++DFG SK+
Sbjct: 116 KLYFYQMLLAVQ------YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 165
Query: 461 DIGETYASSEVRGTFGYLDPEYRSNCKV---NSSGDVYSFGIVLLQILSG 507
+GET + GT YL PE + N + D +S G++L LSG
Sbjct: 166 -LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 26/226 (11%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKGKLSN------NQHVAIKHITNEGNVET--- 352
Y E + EK+ L +G+G G VY+G + VA+K + ++
Sbjct: 7 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLF--------GKDKCL 404
F+ E + ++V LLG + ++ EL +G+L +L +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 405 SWIQRL-EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
+Q + ++A + A G+ +L++ VHR++ N ++ +F K+ DFG+++ DI
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTR--DIY 181
Query: 464 ET-YASSEVRGTFG--YLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
ET Y +G ++ PE + +S D++SFG+VL +I S
Sbjct: 182 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 19 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT 65
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 66 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 122
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 123 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 179
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 180 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 32/206 (15%)
Query: 319 LIGEGITGKVY--KGKLSNNQ----HVAIKHITNEGNVETFVREVASSSHVRHPNLVALL 372
++G+G G+V K K++ + ++ + + + + E+ +REV + HPN++ L
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 373 GYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIV 432
+ +L+ E+ G L + + + K S + I G+ ++H + IV
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMH---KNKIV 172
Query: 433 HRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVR---GTFGYLDPE----- 481
HRD+KP N+LL + ++ DFGLS + AS +++ GT Y+ PE
Sbjct: 173 HRDLKPENLLLESKSKDANIRIIDFGLSTHFE-----ASKKMKDKIGTAYYIAPEVLHGT 227
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSG 507
Y C DV+S G++L +LSG
Sbjct: 228 YDEKC------DVWSTGVILYILLSG 247
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 5 VEDWDLVQTLGEGAAGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 108
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 26/170 (15%)
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDK-----C 403
NVET E+ + HP ++ + + ++ +++ EL G L + + G + C
Sbjct: 67 NVET---EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 122
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFE---AKLSDFGLSKVI 460
+ ++ +A+ +LH E I+HRD+KP N+LL E K++DFG SK+
Sbjct: 123 KLYFYQMLLAVQ------YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 172
Query: 461 DIGETYASSEVRGTFGYLDPEYRSNCKV---NSSGDVYSFGIVLLQILSG 507
+GET + GT YL PE + N + D +S G++L LSG
Sbjct: 173 -LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 32/207 (15%)
Query: 318 NLIGEGITGKVY--KGKLSNNQ----HVAIKHITNEGNVETFVREVASSSHVRHPNLVAL 371
++G+G G+V K K++ + ++ + + + + E+ +REV + HPN++ L
Sbjct: 38 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 97
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
+ +L+ E+ G L + + + K S + I G+ ++H + I
Sbjct: 98 YEFFEDKGYFYLVGEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMH---KNKI 153
Query: 432 VHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVR---GTFGYLDPE---- 481
VHRD+KP N+LL + ++ DFGLS + AS +++ GT Y+ PE
Sbjct: 154 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFE-----ASKKMKDKIGTAYYIAPEVLHG 208
Query: 482 -YRSNCKVNSSGDVYSFGIVLLQILSG 507
Y C DV+S G++L +LSG
Sbjct: 209 TYDEKC------DVWSTGVILYILLSG 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 25 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT 71
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 72 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 128
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 129 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 185
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 186 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 17 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT 63
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 64 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 120
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 121 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 177
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 178 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 22 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 68
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 69 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 125
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 126 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 182
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 183 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 23 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 69
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 70 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 126
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 127 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 183
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 184 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 14 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 60
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 61 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 117
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 118 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 174
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 175 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 21 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 67
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 68 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 124
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 125 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 37 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT 83
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 84 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 140
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 141 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 197
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 198 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 15 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 61
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 62 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 118
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 119 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 175
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 176 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 15 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 61
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 62 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 118
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 119 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 175
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 176 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ ++ +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAML 62
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 109
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 19 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT 65
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 66 YCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 122
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 123 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPD 179
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 180 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 24/192 (12%)
Query: 324 ITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFL 383
+ G+ Y + N + ++ + + + RE ++HPN+V L +L
Sbjct: 34 LAGQEYAAMIINTKKLSAR------DHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87
Query: 384 IYELCPNGNLAEWLFGKD-----KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKP 438
I++L G L E + ++ IQ++ A+ LH + G +VHR++KP
Sbjct: 88 IFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV--------LHCHQMG-VVHRNLKP 138
Query: 439 TNILLGPNFEA---KLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
N+LL + KL+DFGL+ ++ GE A GT GYL PE D++
Sbjct: 139 ENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLW 197
Query: 496 SFGIVLLQILSG 507
+ G++L +L G
Sbjct: 198 ACGVILYILLVG 209
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLI 384
T +V+ GK+ + H E E+A + +P++V G+ D +++
Sbjct: 50 TKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVV 104
Query: 385 YELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLG 444
E+C +L E L + K ++ + + +G+ +LH+ ++HRD+K N+ L
Sbjct: 105 LEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLN 160
Query: 445 PNFEAKLSDFGLSKVIDI-GETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQ 503
+ + K+ DFGL+ I+ GE ++ GT Y+ PE + D++S G +L
Sbjct: 161 DDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 218
Query: 504 ILSGK 508
+L GK
Sbjct: 219 LLVGK 223
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 19 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT 65
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 66 YCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 122
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 123 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 179
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 180 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLI 384
T +V+ GK+ + H E E+A + +P++V G+ D +++
Sbjct: 66 TKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVV 120
Query: 385 YELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLG 444
E+C +L E L + K ++ + + +G+ +LH+ ++HRD+K N+ L
Sbjct: 121 LEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLN 176
Query: 445 PNFEAKLSDFGLSKVIDI-GETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQ 503
+ + K+ DFGL+ I+ GE ++ GT Y+ PE + D++S G +L
Sbjct: 177 DDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 504 ILSGK 508
+L GK
Sbjct: 235 LLVGK 239
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 21 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 67
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEW-LFGKDKC--LS 405
+ +RE+ RH N++ + +R + ++ +L E L+ KC LS
Sbjct: 68 YCQRTLREIKILLRFRHENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLS 126
Query: 406 WIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET 465
RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 127 NDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 183
Query: 466 YAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 108
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 91/189 (48%), Gaps = 16/189 (8%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI-TNEGNVETFVREVASSSHVRHPNLVALLGYCLRV 378
+G G G+V+ + + VA+K + +VE F+ E ++H LV L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK- 248
Query: 379 DECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-EIAIDSARGLWFLHSYSEGCIVHRDIK 437
+ ++I E G+L ++L + + +L + + A G+ F+ + +HRD++
Sbjct: 249 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLR 305
Query: 438 PTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
NIL+ + K++DFGL++V G + + PE + DV+SF
Sbjct: 306 AANILVSASLVCKIADFGLARV---GAKFP-------IKWTAPEAINFGSFTIKSDVWSF 355
Query: 498 GIVLLQILS 506
GI+L++I++
Sbjct: 356 GILLMEIVT 364
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 10/201 (4%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHV-AIKHI---TNEGNVETFVREVASSSHVRHPN 367
E +L+ IG+G G+VYKG ++ + V AIK I E +E +E+ S P
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+ G L+ + ++I E G+ + L K L I + +GL +LHS
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLHSER 136
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCK 487
+ +HRDIK N+LL + KL+DFG++ + + + V GT ++ PE
Sbjct: 137 K---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSA 192
Query: 488 VNSSGDVYSFGIVLLQILSGK 508
+ D++S GI +++ G+
Sbjct: 193 YDFKADIWSLGITAIELAKGE 213
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 26/170 (15%)
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDK-----C 403
NVET E+ + HP ++ + + ++ +++ EL G L + + G + C
Sbjct: 200 NVET---EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 255
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFE---AKLSDFGLSKVI 460
+ ++ +A+ +LH E I+HRD+KP N+LL E K++DFG SK+
Sbjct: 256 KLYFYQMLLAVQ------YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 305
Query: 461 DIGETYASSEVRGTFGYLDPEYRSNCKV---NSSGDVYSFGIVLLQILSG 507
+GET + GT YL PE + N + D +S G++L LSG
Sbjct: 306 -LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 108
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 4 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 107
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 108 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 167
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 108
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 109
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 26/170 (15%)
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDK-----C 403
NVET E+ + HP ++ + + ++ +++ EL G L + + G + C
Sbjct: 186 NVET---EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 241
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFE---AKLSDFGLSKVI 460
+ ++ +A+ +LH E I+HRD+KP N+LL E K++DFG SK+
Sbjct: 242 KLYFYQMLLAVQ------YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 291
Query: 461 DIGETYASSEVRGTFGYLDPEYRSNCKV---NSSGDVYSFGIVLLQILSG 507
+GET + GT YL PE + N + D +S G++L LSG
Sbjct: 292 -LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 108
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 108
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 32/214 (14%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHITNEG----NVETFVREVASSSHVR 364
++L L +G G G V Y +L Q VA+K ++ + RE+ H++
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLK 85
Query: 365 HPNLVALLGYCLRV------DECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL E +L+ L +L + K + LS + R
Sbjct: 86 HENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIV--KSQALSDEHVQFLVYQLLR 142
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRG---TF 475
GL ++HS I+HRD+KP+N+ + + E ++ DFGL++ D E+ G T
Sbjct: 143 GLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQAD-------EEMTGYVATR 192
Query: 476 GYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
Y PE N N + D++S G ++ ++L GK
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 109
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 108
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 109
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 109
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 109
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 317 LNLIGEGITGKVYKGK-LSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPNLVAL 371
L IG+G KV + + + VA++ I N +++ REV + HPN+V L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI-AIDSARGLWFLHSYSEGC 430
+L+ E G + ++L + R + I SA + + H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA--VQYCH---QKF 133
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNS 490
IVHRD+K N+LL + K++DFG S G E G+ Y PE K +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL--DEFCGSPPYAAPELFQGKKYDG 191
Query: 491 SG-DVYSFGIVLLQILSG 507
DV+S G++L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAI+ I+ ++
Sbjct: 21 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQT 67
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 68 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 124
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 125 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ +E T Y PE N K S D++S G +L ++LS +
Sbjct: 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 21 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 67
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 68 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 124
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 125 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ E T Y PE N K S D++S G +L ++LS +
Sbjct: 182 HDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 31/228 (13%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQ-HVAIKHIT---NEG 348
Q+ D G PRYT L+ IGEG G V + N+ VAIK I+ ++
Sbjct: 22 QVFDVG-PRYT------------NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQT 68
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCL-----RVDECFLIYELCPNGNLAEWLFGKDKC 403
+ +RE+ RH N++ + ++ + +++ +L +L + L K +
Sbjct: 69 YCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQH 125
Query: 404 LSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG 463
LS RGL ++HS ++HRD+KP+N+LL + K+ DFGL++V D
Sbjct: 126 LSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 182
Query: 464 ETYAS--SEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSGK 508
+ E T Y PE N K S D++S G +L ++LS +
Sbjct: 183 HDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 109
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLS 405
E REV+ V HPN++ L + LI EL G L ++L +++ S
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 406 WIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLG----PNFEAKLSDFGLSKVID 461
+I+++ +D G+ +LH+ I H D+KP NI+L P KL DFGL+ I+
Sbjct: 120 FIKQI---LD---GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 462 IGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
G + + + GT ++ PE + + D++S G++ +LSG
Sbjct: 171 DGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 311 TEKLNELNLIGEGITGKVYKGKLSNN----QHVAIKHITNEGNV---ETFVREVASSSHV 363
E + + +GEG G+V +L+ N + VA+K + + V E +E+ + +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE--IAIDSARGLW 421
H N+V G+ + +L E C G L R+E I +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQR 108
Query: 422 FLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRG 473
F H G I HRDIKP N+LL K+SDFGL+ V +++ G
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 474 TFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
T Y+ PE + ++ DV+S GIVL +L+G+
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 20/201 (9%)
Query: 317 LNLIGEGITGKVYKGK-LSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPNLVAL 371
L IG+G KV + + + VAIK I N +++ REV + HPN+V L
Sbjct: 17 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 76
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI-AIDSARGLWFLHSYSEGC 430
+LI E G + ++L + R + I SA + + H +
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA--VQYCH---QKR 131
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG---ETYASSEVRGTFGYLDPEYRSNCK 487
IVHRD+K N+LL + K++DFG S +G +T+ G+ Y PE K
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC-----GSPPYAAPELFQGKK 186
Query: 488 VNSSG-DVYSFGIVLLQILSG 507
+ DV+S G++L ++SG
Sbjct: 187 YDGPEVDVWSLGVILYTLVSG 207
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 104/236 (44%), Gaps = 34/236 (14%)
Query: 307 VHYATEKLNELNLIGEGITG--KVYKGKLSNNQHVAIKHITNEGNV-ETFVREVASSSHV 363
+ + +++ + + IG G G ++ + KL+ + VA+K+I + E RE+ + +
Sbjct: 15 IMHDSDRYDFVKDIGSGNFGVARLMRDKLTK-ELVAVKYIERGAAIDENVQREIINHRSL 73
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSAR 418
RHPN+V L +I E G L E + F +D+ + Q+L
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL------LS 127
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILL--GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFG 476
G+ + HS I HRD+K N LL P K+ DFG SK + + S V GT
Sbjct: 128 GVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQPKSTV-GTPA 182
Query: 477 YLDPEYRSNCKVNSS-GDVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREY 531
Y+ PE + + DV+S G+ L +L G A DP+ R+Y
Sbjct: 183 YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG-----------AYPFEDPEEPRDY 227
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 14/166 (8%)
Query: 349 NVETFVREVASS----SHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCL 404
N+E F E+ + + HPN++ L +L+ E G L E + + K
Sbjct: 85 NIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-F 143
Query: 405 SWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPN---FEAKLSDFGLSKVID 461
I G+ +LH ++ IVHRDIKP NILL K+ DFGLS
Sbjct: 144 DECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSF-- 198
Query: 462 IGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ Y + GT Y+ PE K N DV+S G+++ +L G
Sbjct: 199 FSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 32/239 (13%)
Query: 296 DPGCPR--YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNE 347
D C R Y + + ++L +G G G+V + K + + VA+K + E
Sbjct: 11 DEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK-MLKE 69
Query: 348 GNVETFVREVASSSHV-----RHPNLVALLGYCLRVD-ECFLIYELCPNGNLAEWLFGK- 400
G + R + S + H N+V LLG C + +I E C GNL+ +L K
Sbjct: 70 GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 129
Query: 401 ------------DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFE 448
L+ + + A+G+ FL S +HRD+ NILL
Sbjct: 130 NEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNV 186
Query: 449 AKLSDFGLSKVIDIG-ETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
K+ DFGL++ I + + R ++ PE + DV+SFG++L +I S
Sbjct: 187 VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLI 384
T +V+ GK+ + H E E+A + +P++V G+ D +++
Sbjct: 66 TKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVV 120
Query: 385 YELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLG 444
E+C +L E L + K ++ + + +G+ +LH+ ++HRD+K N+ L
Sbjct: 121 LEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLN 176
Query: 445 PNFEAKLSDFGLSKVIDI-GETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQ 503
+ + K+ DFGL+ I+ GE + + GT Y+ PE + D++S G +L
Sbjct: 177 DDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 504 ILSGK 508
+L GK
Sbjct: 235 LLVGK 239
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 33/240 (13%)
Query: 296 DPGCPR--YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNE 347
D C R Y + + ++LN +G G G+V + K + + VA+K + E
Sbjct: 10 DEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKE 68
Query: 348 GNVETFVREVASSSHV-----RHPNLVALLGYCLRVD-ECFLIYELCPNGNLAEWLFGK- 400
G + R + S + H N+V LLG C + +I E C GNL+ +L K
Sbjct: 69 GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 128
Query: 401 -------------DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNF 447
L+ + + A+G+ FL S CI HRD+ NILL
Sbjct: 129 NEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKN 185
Query: 448 EAKLSDFGLSK-VIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
K+ DFGL++ + + + R ++ PE + DV+SFG++L +I S
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLI 384
TG + K+ N + ++ + + + RE ++HPN+V L +L+
Sbjct: 53 TGLEFAAKIINTKKLSAR------DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106
Query: 385 YELCPNGNLAEWLFGKD--------KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++L G L E + ++ C+ I LE + + HS IVHR++
Sbjct: 107 FDLVTGGELFEDIVAREFYSEADASHCIQQI--LE-------SIAYCHS---NGIVHRNL 154
Query: 437 KPTNILLGPNFEA---KLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGD 493
KP N+LL + KL+DFGL+ I++ ++ A GT GYL PE + D
Sbjct: 155 KPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 212
Query: 494 VYSFGIVLLQILSG 507
+++ G++L +L G
Sbjct: 213 IWACGVILYILLVG 226
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLI 384
T +V+ GK+ + H E E+A + +P++V G+ D +++
Sbjct: 66 TKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVV 120
Query: 385 YELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLG 444
E+C +L E L + K ++ + + +G+ +LH+ ++HRD+K N+ L
Sbjct: 121 LEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNR---VIHRDLKLGNLFLN 176
Query: 445 PNFEAKLSDFGLSKVIDI-GETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQ 503
+ + K+ DFGL+ I+ GE + GT Y+ PE + D++S G +L
Sbjct: 177 DDMDVKIGDFGLATKIEFDGER--KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 504 ILSGK 508
+L GK
Sbjct: 235 LLVGK 239
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 12/190 (6%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVD 379
I + T +V+ GK+ + H + ++E + + HV V G+ D
Sbjct: 40 ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHV-----VGFHGFFEDND 94
Query: 380 ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPT 439
F++ ELC +L E L + K L+ + G +LH ++HRD+K
Sbjct: 95 FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLG 150
Query: 440 NILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFG 498
N+ L + E K+ DFGL+ ++ GE + + GT Y+ PE S + DV+S G
Sbjct: 151 NLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIG 208
Query: 499 IVLLQILSGK 508
++ +L GK
Sbjct: 209 CIMYTLLVGK 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHITNEG----NVETFVREVASSSHVR 364
++L L +G G G V Y +L Q VA+K ++ + RE+ H++
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLK 85
Query: 365 HPNLVALLGY---CLRVDECFLIYELCPNGNLAEWLFGKD-----KC--LSWIQRLEIAI 414
H N++ LL +++ +Y L L G D KC LS +
Sbjct: 86 HENVIGLLDVFTPATSIEDFSEVY-------LVTTLMGADLNNIVKCQALSDEHVQFLVY 138
Query: 415 DSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRG- 473
RGL ++HS I+HRD+KP+N+ + + E ++ DFGL++ D E+ G
Sbjct: 139 QLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQAD-------EEMTGY 188
Query: 474 --TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
T Y PE N N + D++S G ++ ++L GK
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 25/206 (12%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSH----------VRHP 366
L ++G+G GKV++ + + VR ++H V+HP
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNL-----AEWLFGKDKCLSWIQRLEIAIDSARGLW 421
+V L+ + +LI E G L E +F +D ++ + +A+
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------ 135
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE 481
H + +G I++RD+KP NI+L KL+DFGL K I + + GT Y+ PE
Sbjct: 136 --HLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHXFCGTIEYMAPE 191
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSG 507
N + D +S G ++ +L+G
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 24/205 (11%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLV 369
T +E+ L E TGK++ K I +G + E+A ++H N+V
Sbjct: 31 GTGAFSEVVLAEEKATGKLFAVK-------CIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWL----FGKDKCLSWIQRLEIAIDSARGLWFLHS 425
AL + +L+ +L G L + + F +K S + R + +++LH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVL-----DAVYYLHR 138
Query: 426 YSEGCIVHRDIKPTNIL-LGPNFEAK--LSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
IVHRD+KP N+L + E+K +SDFGLSK+ G+ +++ GT GY+ PE
Sbjct: 139 MG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA--CGTPGYVAPEV 193
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSG 507
+ + + D +S G++ +L G
Sbjct: 194 LAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 98/243 (40%), Gaps = 59/243 (24%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHI----------TNEGNVETFVREVASSSHVRHPNLV 369
IG+G G V NQ AI+ I N +VE EV + HPN+
Sbjct: 34 IGQGSYGVVRVA--IENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91
Query: 370 ALLGYCLRVDECF--LIYELCPNGNLAEWL------------------------------ 397
L Y + DE + L+ ELC G+L + L
Sbjct: 92 RL--YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149
Query: 398 -----FGKDKCLSWIQRLEIAIDSARGLW-FLHSYSEGCIVHRDIKPTNILLGPN--FEA 449
G + L ++QR ++ + R ++ LH I HRDIKP N L N FE
Sbjct: 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEI 209
Query: 450 KLSDFGLSK---VIDIGETYASSEVRGTFGYLDPEY--RSNCKVNSSGDVYSFGIVLLQI 504
KL DFGLSK ++ GE Y + GT ++ PE +N D +S G++L +
Sbjct: 210 KLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLL 269
Query: 505 LSG 507
L G
Sbjct: 270 LMG 272
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 12/190 (6%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVD 379
I + T +V+ GK+ + H + ++E + + HV V G+ D
Sbjct: 36 ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHV-----VGFHGFFEDND 90
Query: 380 ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPT 439
F++ ELC +L E L + K L+ + G +LH ++HRD+K
Sbjct: 91 FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLG 146
Query: 440 NILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFG 498
N+ L + E K+ DFGL+ ++ GE + + GT Y+ PE S + DV+S G
Sbjct: 147 NLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIG 204
Query: 499 IVLLQILSGK 508
++ +L GK
Sbjct: 205 CIMYTLLVGK 214
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 25/206 (12%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSH----------VRHP 366
L ++G+G GKV++ + + VR ++H V+HP
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 367 NLVALLGYCLRVDECFLIYELCPNGNL-----AEWLFGKDKCLSWIQRLEIAIDSARGLW 421
+V L+ + +LI E G L E +F +D ++ + +A+
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------ 135
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE 481
H + +G I++RD+KP NI+L KL+DFGL K I + + GT Y+ PE
Sbjct: 136 --HLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHTFCGTIEYMAPE 191
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSG 507
N + D +S G ++ +L+G
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 12/190 (6%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVD 379
I + T +V+ GK+ + H + ++E + + HV V G+ D
Sbjct: 36 ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHV-----VGFHGFFEDND 90
Query: 380 ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPT 439
F++ ELC +L E L + K L+ + G +LH ++HRD+K
Sbjct: 91 FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLG 146
Query: 440 NILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFG 498
N+ L + E K+ DFGL+ ++ GE + + GT Y+ PE S + DV+S G
Sbjct: 147 NLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIG 204
Query: 499 IVLLQILSGK 508
++ +L GK
Sbjct: 205 CIMYTLLVGK 214
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLI 384
TG + K+ N + ++ + + + RE ++HPN+V L +L+
Sbjct: 29 TGLEFAAKIINTKKLSAR------DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 82
Query: 385 YELCPNGNLAEWLFGKD--------KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++L G L E + ++ C+ Q LE + + HS IVHR++
Sbjct: 83 FDLVTGGELFEDIVAREFYSEADASHCIQ--QILE-------SIAYCHS---NGIVHRNL 130
Query: 437 KPTNILLGPNFEA---KLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGD 493
KP N+LL + KL+DFGL+ I++ ++ A GT GYL PE + D
Sbjct: 131 KPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 188
Query: 494 VYSFGIVLLQILSG 507
+++ G++L +L G
Sbjct: 189 IWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLI 384
TG + K+ N + ++ + + + RE ++HPN+V L +L+
Sbjct: 30 TGLEFAAKIINTKKLSAR------DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83
Query: 385 YELCPNGNLAEWLFGKD--------KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++L G L E + ++ C+ Q LE + + HS IVHR++
Sbjct: 84 FDLVTGGELFEDIVAREFYSEADASHCIQ--QILE-------SIAYCHS---NGIVHRNL 131
Query: 437 KPTNILLGPNFEA---KLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGD 493
KP N+LL + KL+DFGL+ I++ ++ A GT GYL PE + D
Sbjct: 132 KPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 189
Query: 494 VYSFGIVLLQILSG 507
+++ G++L +L G
Sbjct: 190 IWACGVILYILLVG 203
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHITNEG----NVETFVREVASSSHVR 364
++L L +G G G V Y +L Q VA+K ++ + RE+ H++
Sbjct: 20 QRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLK 77
Query: 365 HPNLVALLGY---CLRVDECFLIYELCPNGNLAEWLFGKD-----KC--LSWIQRLEIAI 414
H N++ LL +++ +Y L L G D KC LS +
Sbjct: 78 HENVIGLLDVFTPATSIEDFSEVY-------LVTTLMGADLNNIVKCQALSDEHVQFLVY 130
Query: 415 DSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRG- 473
RGL ++HS I+HRD+KP+N+ + + E ++ DFGL++ D E+ G
Sbjct: 131 QLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQAD-------EEMTGY 180
Query: 474 --TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
T Y PE N N + D++S G ++ ++L GK
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 317 LNLIGEGITGKVYKGK-LSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPNLVAL 371
L IG+G KV + + + VA+K I N +++ REV + HPN+V L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI-AIDSARGLWFLHSYSEGC 430
+L+ E G + ++L + R + I SA + + H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA--VQYCH---QKF 133
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNS 490
IVHRD+K N+LL + K++DFG S G + G+ Y PE K +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYDG 191
Query: 491 SG-DVYSFGIVLLQILSG 507
DV+S G++L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 317 LNLIGEGITGKVYKGK-LSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPNLVAL 371
L IG+G KV + + + VA+K I N +++ REV + HPN+V L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI-AIDSARGLWFLHSYSEGC 430
+L+ E G + ++L + R + I SA + + H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA--VQYCH---QKF 133
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNS 490
IVHRD+K N+LL + K++DFG S G + G+ Y PE K +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYDG 191
Query: 491 SG-DVYSFGIVLLQILSG 507
DV+S G++L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 24/191 (12%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLI 384
TG+ Y K+ N + ++ + + + RE ++HPN+V L +L+
Sbjct: 28 TGQEYAAKIINTKKLSAR------DHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLV 81
Query: 385 YELCPNGNLAEWLFGKD-----KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPT 439
++L G L E + ++ IQ++ +++ H + G IVHRD+KP
Sbjct: 82 FDLVTGGELFEDIVAREYYSEADASHCIQQILESVN--------HCHLNG-IVHRDLKPE 132
Query: 440 NILLGPNFEA---KLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYS 496
N+LL + KL+DFGL+ + G+ A GT GYL PE D+++
Sbjct: 133 NLLLASKSKGAAVKLADFGLAIEVQ-GDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWA 191
Query: 497 FGIVLLQILSG 507
G++L +L G
Sbjct: 192 CGVILYILLVG 202
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVRE--VASSSHVRHPNLVALLGYCL- 376
+G+G G+V++G L + + VA+K I + + +++ RE + ++ +RH N++ + +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVK-IFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMT 73
Query: 377 ---RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH-----SYSE 428
+ +LI +G+L ++L + + L L +A+ +A GL LH + +
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFL--QRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGK 131
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY---ASSEVRGTFGYLDPEY--- 482
I HRD K N+L+ N + ++D GL+ + G Y ++ GT Y+ PE
Sbjct: 132 PAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDE 191
Query: 483 --RSNC-KVNSSGDVYSFGIVLLQI 504
R++C + D+++FG+VL +I
Sbjct: 192 QIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLI 384
TG + K+ N + ++ + + + RE ++HPN+V L +L+
Sbjct: 30 TGLEFAAKIINTKKLSAR------DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83
Query: 385 YELCPNGNLAEWLFGKD--------KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDI 436
++L G L E + ++ C+ Q LE + + HS IVHR++
Sbjct: 84 FDLVTGGELFEDIVAREFYSEADASHCIQ--QILE-------SIAYCHS---NGIVHRNL 131
Query: 437 KPTNILLGPNFEA---KLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGD 493
KP N+LL + KL+DFGL+ I++ ++ A GT GYL PE + D
Sbjct: 132 KPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 189
Query: 494 VYSFGIVLLQILSG 507
+++ G++L +L G
Sbjct: 190 IWACGVILYILLVG 203
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 24/191 (12%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLI 384
TG+ Y K+ N + ++ + + + RE ++HPN+V L +L+
Sbjct: 28 TGQEYAAKIINTKKLSAR------DHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLV 81
Query: 385 YELCPNGNLAEWLFGKD-----KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPT 439
++L G L E + ++ IQ++ +++ H + G IVHRD+KP
Sbjct: 82 FDLVTGGELFEDIVAREYYSEADASHCIQQILESVN--------HCHLNG-IVHRDLKPE 132
Query: 440 NILLGPNFEA---KLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYS 496
N+LL + KL+DFGL+ + G+ A GT GYL PE D+++
Sbjct: 133 NLLLASKSKGAAVKLADFGLAIEVQ-GDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWA 191
Query: 497 FGIVLLQILSG 507
G++L +L G
Sbjct: 192 CGVILYILLVG 202
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 30/206 (14%)
Query: 317 LNLIGEGITGKVYKGK-LSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPNLVAL 371
L IG+G KV + + + VAIK I N +++ REV + HPN+V L
Sbjct: 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI-AIDSARGLWFLHSYSEGC 430
+LI E G + ++L + R + I SA + + H +
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA--VQYCH---QKR 134
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIG---------ETYASSEVRGTFGYLDPE 481
IVHRD+K N+LL + K++DFG S +G YA+ E+ Y PE
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSG 507
DV+S G++L ++SG
Sbjct: 195 V----------DVWSLGVILYTLVSG 210
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 27/220 (12%)
Query: 300 PRYTIREVHYATEKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNE-----GNVETF 353
PR T+ E Y L L+G+G GKV K + ++ A+K + E V
Sbjct: 5 PRVTMNEFEY-------LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT 57
Query: 354 VREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNL-----AEWLFGKDKCLSWIQ 408
+ E + RHP L AL D + E G L E +F +D+ +
Sbjct: 58 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 117
Query: 409 RLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYAS 468
+ A+D +LHS E +V+RD+K N++L + K++DFGL K I +
Sbjct: 118 EIVSALD------YLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATM 168
Query: 469 SEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
GT YL PE + + D + G+V+ +++ G+
Sbjct: 169 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL-- 410
+RE+ P +V G E + E G+L D+ L +R+
Sbjct: 61 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-------DQVLKEAKRIPE 113
Query: 411 ----EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLS-KVIDIGET 465
+++I RGL +L + I+HRD+KP+NIL+ E KL DFG+S ++ID +
Sbjct: 114 EILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---S 168
Query: 466 YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
A+S V GT Y+ PE + D++S G+ L+++ G+
Sbjct: 169 MANSFV-GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 12/190 (6%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVD 379
I + T +V+ GK+ + H + ++E + + HV V G+ D
Sbjct: 34 ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHV-----VGFHGFFEDND 88
Query: 380 ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPT 439
F++ ELC +L E L + K L+ + G +LH ++HRD+K
Sbjct: 89 FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLG 144
Query: 440 NILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFG 498
N+ L + E K+ DFGL+ ++ GE + GT Y+ PE S + DV+S G
Sbjct: 145 NLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG 202
Query: 499 IVLLQILSGK 508
++ +L GK
Sbjct: 203 CIMYTLLVGK 212
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHV-AIKHI---TNEGNVETFVREVASSSHVRHPN 367
E +L IG+G G+V+KG + Q V AIK I E +E +E+ S
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+ G L+ + ++I E G+ + L + Q + + +GL +LHS
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEILKGLDYLHSEK 140
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCK 487
+ +HRDIK N+LL + KL+DFG++ + + ++ V GT ++ PE
Sbjct: 141 K---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSA 196
Query: 488 VNSSGDVYSFGIVLLQILSGK 508
+S D++S GI +++ G+
Sbjct: 197 YDSKADIWSLGITAIELAKGE 217
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 289 FKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVY--KGKLSNNQHVAIKHITN 346
F+G PG + + + +E + +G G G+V + K+++ + AIK I
Sbjct: 16 FQGDLQATPGM--FITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVER-AIK-IIR 71
Query: 347 EGNVET-----FVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKD 401
+ +V T + EVA + HPN++ L + +L+ E G L + + +
Sbjct: 72 KTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM 131
Query: 402 KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFE---AKLSDFGLSK 458
K + + I G+ +LH ++ IVHRD+KP N+LL + K+ DFGLS
Sbjct: 132 K-FNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSA 187
Query: 459 VIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
V + E GT Y+ PE K + DV+S G++L +L+G
Sbjct: 188 VFE--NQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAG 233
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 320 IGEGITGKVYKGK-LSNNQHVAIKHI-----TNEGNVETFVREVASSSHVRHPNLVALLG 373
IG G +VY+ L + VA+K + + ++E+ + HPN++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 374 YCLRVDECFLIYELCPNGNLAEWL--FGKDKCL---SWIQRLEIAIDSARGLWFLHSYSE 428
+ +E ++ EL G+L+ + F K K L + + + + SA L +HS
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA--LEHMHSRR- 156
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKV 488
++HRDIKP N+ + KL D GL + T A S V GT Y+ PE
Sbjct: 157 --VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGY 213
Query: 489 NSSGDVYSFGIVLLQI 504
N D++S G +L ++
Sbjct: 214 NFKSDIWSLGCLLYEM 229
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 314 LNELNLIGEGITGKVYKGKLS----NNQHVAIK-----HITNEGNVETFVREVASSSHVR 364
L L +G+G G V +G+ VA+K ++ ++ F+REV + +
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH 424
H NL+ L G L ++ EL P G+L + L A+ A G+ +L
Sbjct: 80 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 425 SYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGT-FGYLDPEY 482
S +HRD+ N+LL K+ DFGL + + + Y E R F + PE
Sbjct: 139 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195
Query: 483 RSNCKVNSSGDVYSFGIVLLQILS 506
+ + D + FG+ L ++ +
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 12/190 (6%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVD 379
I + T +V+ GK+ + H + ++E + + HV V G+ D
Sbjct: 58 ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHV-----VGFHGFFEDND 112
Query: 380 ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPT 439
F++ ELC +L E L + K L+ + G +LH ++HRD+K
Sbjct: 113 FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLG 168
Query: 440 NILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFG 498
N+ L + E K+ DFGL+ ++ GE + GT Y+ PE S + DV+S G
Sbjct: 169 NLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG 226
Query: 499 IVLLQILSGK 508
++ +L GK
Sbjct: 227 CIMYTLLVGK 236
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 317 LNLIGEGITGKVYKGK-LSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPNLVAL 371
L IG+G KV + + + VA+K I N +++ REV + HPN+V L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI-AIDSARGLWFLHSYSEGC 430
+L+ E G + ++L + R + I SA + + H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA--VQYCH---QKF 133
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNS 490
IVHRD+K N+LL + K++DFG S G + G Y PE K +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA--FCGAPPYAAPELFQGKKYDG 191
Query: 491 SG-DVYSFGIVLLQILSG 507
DV+S G++L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 96/232 (41%), Gaps = 36/232 (15%)
Query: 308 HYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNV---ETFVREVA 358
+ E L ++G G GKV K + VA+K + + + E + E+
Sbjct: 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 359 SSSHV-RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDK--------- 402
+ + H N+V LLG C +LI+E C G+L +L F +D+
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 403 -------CLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFG 455
L++ L A A+G+ FL S VHRD+ N+L+ K+ DFG
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFG 217
Query: 456 LSKVIDIGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
L++ I Y R ++ PE DV+S+GI+L +I S
Sbjct: 218 LARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 101/241 (41%), Gaps = 34/241 (14%)
Query: 296 DPGCPR--YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNE 347
D C R Y + + ++L +G G G+V + K + + VA+K + E
Sbjct: 9 DEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKE 67
Query: 348 GNVETFVREVASSSHV-----RHPNLVALLGYCLRVD-ECFLIYELCPNGNLAEWLFGK- 400
G + R + S + H N+V LLG C + +I E C GNL+ +L K
Sbjct: 68 GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 127
Query: 401 --------------DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPN 446
L+ + + A+G+ FL S CI HRD+ NILL
Sbjct: 128 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCI-HRDLAARNILLSEK 184
Query: 447 FEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
K+ DFGL++ I Y + R ++ PE + DV+SFG++L +I
Sbjct: 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
Query: 506 S 506
S
Sbjct: 245 S 245
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 314 LNELNLIGEGITGKVYKGKLS----NNQHVAIK-----HITNEGNVETFVREVASSSHVR 364
L L +G+G G V +G+ VA+K ++ ++ F+REV + +
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH 424
H NL+ L G L ++ EL P G+L + L A+ A G+ +L
Sbjct: 70 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 425 SYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGT-FGYLDPEY 482
S +HRD+ N+LL K+ DFGL + + + Y E R F + PE
Sbjct: 129 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 483 RSNCKVNSSGDVYSFGIVLLQILS 506
+ + D + FG+ L ++ +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E+F + S + H +LV G C DE L+ E G+L +L C++ + +L
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL 116
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL---------GPNFEAKLSDFGLSKVID 461
E+A A W +H E ++H ++ NILL P F KLSD G+S +
Sbjct: 117 EVAKQLA---WAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPF-IKLSDPGISITV- 171
Query: 462 IGETYASSEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSG 507
++ ++ PE N K +N + D +SFG L +I SG
Sbjct: 172 ----LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 101/241 (41%), Gaps = 34/241 (14%)
Query: 296 DPGCPR--YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNE 347
D C R Y + + ++L +G G G+V + K + + VA+K + E
Sbjct: 11 DEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKE 69
Query: 348 GNVETFVREVASSSHV-----RHPNLVALLGYCLRVD-ECFLIYELCPNGNLAEWLFGK- 400
G + R + S + H N+V LLG C + +I E C GNL+ +L K
Sbjct: 70 GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 129
Query: 401 --------------DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPN 446
L+ + + A+G+ FL S CI HRD+ NILL
Sbjct: 130 NEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCI-HRDLAARNILLSEK 186
Query: 447 FEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
K+ DFGL++ I Y + R ++ PE + DV+SFG++L +I
Sbjct: 187 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 246
Query: 506 S 506
S
Sbjct: 247 S 247
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 12/190 (6%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVD 379
I + T +V+ GK+ + H + ++E + + HV V G+ D
Sbjct: 60 ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHV-----VGFHGFFEDND 114
Query: 380 ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPT 439
F++ ELC +L E L + K L+ + G +LH ++HRD+K
Sbjct: 115 FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLG 170
Query: 440 NILLGPNFEAKLSDFGLSKVIDI-GETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFG 498
N+ L + E K+ DFGL+ ++ GE + GT Y+ PE S + DV+S G
Sbjct: 171 NLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG 228
Query: 499 IVLLQILSGK 508
++ +L GK
Sbjct: 229 CIMYTLLVGK 238
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 15/206 (7%)
Query: 312 EKLNELNLIGEGITGKVYKGKLS----NNQHVAIK-----HITNEGNVETFVREVASSSH 362
+ L L +G+G G V +G+ VA+K ++ ++ F+REV +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 363 VRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWF 422
+ H NL+ L G L ++ EL P G+L + L A+ A G+ +
Sbjct: 72 LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 130
Query: 423 LHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGT-FGYLDP 480
L S +HRD+ N+LL K+ DFGL + + + Y E R F + P
Sbjct: 131 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILS 506
E + + D + FG+ L ++ +
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 314 LNELNLIGEGITGKVYKGKLS----NNQHVAIK-----HITNEGNVETFVREVASSSHVR 364
L L +G+G G V +G+ VA+K ++ ++ F+REV + +
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH 424
H NL+ L G L ++ EL P G+L + L A+ A G+ +L
Sbjct: 74 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 425 SYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGT-FGYLDPEY 482
S +HRD+ N+LL K+ DFGL + + + Y E R F + PE
Sbjct: 133 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 483 RSNCKVNSSGDVYSFGIVLLQILS 506
+ + D + FG+ L ++ +
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 40/240 (16%)
Query: 285 KITSFKGVQLKDPGCPRY-TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHV-AIK 342
+ SF+G + P Y R + + L+ +G G G+V+K + + + A+K
Sbjct: 29 RRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVK 88
Query: 343 H----ITNEGNVETFVREVASSSHV-RHPNLVALLGYCLRVDEC-------FLIYELCPN 390
+ + EV S V +HP C+R+++ +L ELC
Sbjct: 89 RSMSPFRGPKDRARKLAEVGSHEKVGQHPC-------CVRLEQAWEEGGILYLQTELC-G 140
Query: 391 GNLAEWLFGKDKCLSWIQRLEIA------IDSARGLWFLHSYSEGCIVHRDIKPTNILLG 444
+L + C +W L A D+ L LHS +VH D+KP NI LG
Sbjct: 141 PSL------QQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLG 191
Query: 445 PNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
P KL DFGL ++++G A G Y+ PE ++ DV+S G+ +L++
Sbjct: 192 PRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMAPELLQGS-YGTAADVFSLGLTILEV 248
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 26/203 (12%)
Query: 319 LIGEGITGKVY--KGKLSNNQ----HVAIKHITNEGNVETFVREVASSSHVRHPNLVALL 372
++G+G G+V K K++ + ++ + + + + E+ +REV + HPN+ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 373 GYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIV 432
+ +L+ E+ G L + + + K S + I G+ + H + IV
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYXH---KNKIV 148
Query: 433 HRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-----YRS 484
HRD+KP N+LL + ++ DFGLS + + + GT Y+ PE Y
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KXKDKIGTAYYIAPEVLHGTYDE 206
Query: 485 NCKVNSSGDVYSFGIVLLQILSG 507
C DV+S G++L +LSG
Sbjct: 207 KC------DVWSTGVILYILLSG 223
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 317 LNLIGEGITGKVYKGK-LSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPNLVAL 371
L IG+G KV + + + VA++ I N +++ REV + HPN+V L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI-AIDSARGLWFLHSYSEGC 430
+L+ E G + ++L + R + I SA + + H +
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA--VQYCH---QKF 133
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNS 490
IVHRD+K N+LL + K++DFG S G + G+ Y PE K +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYDG 191
Query: 491 SG-DVYSFGIVLLQILSG 507
DV+S G++L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 101/241 (41%), Gaps = 34/241 (14%)
Query: 296 DPGCPR--YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNE 347
D C R Y + + ++L +G G G+V + K + + VA+K + E
Sbjct: 46 DEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKE 104
Query: 348 GNVETFVREVASSSHV-----RHPNLVALLGYCLRVD-ECFLIYELCPNGNLAEWLFGK- 400
G + R + S + H N+V LLG C + +I E C GNL+ +L K
Sbjct: 105 GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 164
Query: 401 --------------DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPN 446
L+ + + A+G+ FL S CI HRD+ NILL
Sbjct: 165 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CI-HRDLAARNILLSEK 221
Query: 447 FEAKLSDFGLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
K+ DFGL++ I Y + R ++ PE + DV+SFG++L +I
Sbjct: 222 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 281
Query: 506 S 506
S
Sbjct: 282 S 282
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 314 LNELNLIGEGITGKVYKGKLS----NNQHVAIK-----HITNEGNVETFVREVASSSHVR 364
L L +G+G G V +G+ VA+K ++ ++ F+REV + +
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH 424
H NL+ L G L ++ EL P G+L + L A+ A G+ +L
Sbjct: 70 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 425 SYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGT-FGYLDPEY 482
S +HRD+ N+LL K+ DFGL + + + Y E R F + PE
Sbjct: 129 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 483 RSNCKVNSSGDVYSFGIVLLQILS 506
+ + D + FG+ L ++ +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 32/233 (13%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVR 355
Y + + ++L +G G G+V + K + + VA+K + EG + R
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHR 66
Query: 356 EVASSSHV-----RHPNLVALLGYCLRVD-ECFLIYELCPNGNLAEWLFGK--------- 400
+ S + H N+V LLG C + +I E C GNL+ +L K
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 401 ------DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
L+ + + A+G+ FL S CI HRD+ NILL K+ DF
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCI-HRDLAARNILLSEKNVVKICDF 183
Query: 455 GLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL++ I Y + R ++ PE + DV+SFG++L +I S
Sbjct: 184 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 312 EKLNELNLIGEGITGKVYK------GKLSNNQ--HVAIKH-ITNEGNVETFVREVASSSH 362
EK++EL G G G V+K G + + H+ IK I N+ +RE+
Sbjct: 71 EKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ-----IIRELQVLHE 122
Query: 363 VRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWF 422
P +V G E + E G+L + L + I +++I +GL +
Sbjct: 123 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTY 181
Query: 423 LHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLS-KVIDIGETYASSEVRGTFGYLDPE 481
L + I+HRD+KP+NIL+ E KL DFG+S ++ID + A+S V GT Y+ PE
Sbjct: 182 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFV-GTRSYMSPE 235
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSGK 508
+ D++S G+ L+++ G+
Sbjct: 236 RLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIK---HITNEGNVET-FVREVASSSHVRHPN 367
EK++EL G G G V+K + V + H+ + + +RE+ P
Sbjct: 12 EKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+V G E + E G+L + L + I +++I +GL +L
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 127
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLS-KVIDIGETYASSEVRGTFGYLDPEYRSNC 486
+ I+HRD+KP+NIL+ E KL DFG+S ++ID ++E GT Y+ PE
Sbjct: 128 K--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----EMANEFVGTRSYMSPERLQGT 181
Query: 487 KVNSSGDVYSFGIVLLQILSGK 508
+ D++S G+ L+++ G+
Sbjct: 182 HYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 29 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 79
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 80 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 137
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 138 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 194
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 195 FGSAKQLVRGEPNVSYICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 244
Query: 505 LSGK 508
L G+
Sbjct: 245 LLGQ 248
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 320 IGEGITGKVYKGK-LSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPNLVALLGY 374
IG+G KV + + + VA+K I N +++ REV + HPN+V L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 375 CLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI-AIDSARGLWFLHSYSEGCIVH 433
+L+ E G + ++L + R + I SA + + H + IVH
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA--VQYCH---QKYIVH 137
Query: 434 RDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSG- 492
RD+K N+LL + K++DFG S +G + G+ Y PE K +
Sbjct: 138 RDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--FCGSPPYAAPELFQGKKYDGPEV 195
Query: 493 DVYSFGIVLLQILSG 507
DV+S G++L ++SG
Sbjct: 196 DVWSLGVILYTLVSG 210
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI 412
+RE+ P +V G E + E G+L + L + I ++
Sbjct: 78 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KV 136
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLS-KVIDIGETYASSEV 471
+I +GL +L + I+HRD+KP+NIL+ E KL DFG+S ++ID + A+S V
Sbjct: 137 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFV 191
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
GT Y+ PE + D++S G+ L+++ G+
Sbjct: 192 -GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKL-SNNQHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL + + VAIK
Sbjct: 35 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 85
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 86 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 143
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 144 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 200
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 201 FGSAKQLVRGEPNVSYICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 250
Query: 505 LSGK 508
L G+
Sbjct: 251 LLGQ 254
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 32/233 (13%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVR 355
Y + + ++L +G G G+V + K + + VA+K + EG + R
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHR 66
Query: 356 EVASSSHV-----RHPNLVALLGYCLRVD-ECFLIYELCPNGNLAEWLFGK--------- 400
+ S + H N+V LLG C + +I E C GNL+ +L K
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 401 ------DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
L+ + + A+G+ FL S CI HRD+ NILL K+ DF
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLAS--RKCI-HRDLAARNILLSEKNVVKICDF 183
Query: 455 GLSKVIDIGETYA-SSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL++ I Y + R ++ PE + DV+SFG++L +I S
Sbjct: 184 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKL-SNNQHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL + + VAIK
Sbjct: 37 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 87
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 88 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 145
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 146 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 202
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 203 FGSAKQLVRGEPNVSYICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 252
Query: 505 LSGK 508
L G+
Sbjct: 253 LLGQ 256
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 35 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 85
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 86 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 143
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 144 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 200
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 201 FGSAKQLVRGEPNVSXICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 250
Query: 505 LSGK 508
L G+
Sbjct: 251 LLGQ 254
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 14 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 64
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 65 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 122
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 123 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 179
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 180 FGSAKQLVRGEPNVSYICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 229
Query: 505 LSGK 508
L G+
Sbjct: 230 LLGQ 233
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 304 IREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHV 363
++E+ E + +IG G G+V K+ N + + I N+ E R A ++
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKW--EMLKR--AETACF 121
Query: 364 RHPNLVALLGYCLRV----------DECFLIYELCPNGNLAEWL------FGKDKCLSWI 407
R V + G C + + +L+ + G+L L +D +I
Sbjct: 122 REERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYI 181
Query: 408 QRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA 467
+ +AIDS L + VHRDIKP N+LL N +L+DFG ++ T
Sbjct: 182 GEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQ 232
Query: 468 SSEVRGTFGYLDPEYRSNC-----KVNSSGDVYSFGIVLLQILSGK 508
SS GT Y+ PE K D +S G+ + ++L G+
Sbjct: 233 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 353 FVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI 412
+RE+ P +V G E + E G+L + L + I ++
Sbjct: 70 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KV 128
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLS-KVIDIGETYASSEV 471
+I +GL +L + I+HRD+KP+NIL+ E KL DFG+S ++ID + A+S V
Sbjct: 129 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFV 183
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
GT Y+ PE + D++S G+ L+++ G+
Sbjct: 184 -GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 317 LNLIGEGITGKVYKGK-LSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPNLVAL 371
L IG+G KV + + + VA+K I N +++ REV + HPN+V L
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKL 78
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI-AIDSARGLWFLHSYSEGC 430
+L+ E G + ++L + R + I SA + + H +
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSA--VQYCH---QKF 133
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNS 490
IVHRD+K N+LL + K++DFG S G + G Y PE K +
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA--FCGAPPYAAPELFQGKKYDG 191
Query: 491 SG-DVYSFGIVLLQILSG 507
DV+S G++L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIK---HITNEGNVET-FVREVASSSHVRHPN 367
EK++EL G G G V+K + V + H+ + + +RE+ P
Sbjct: 9 EKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+V G E + E G+L + L + I +++I +GL +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 124
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLS-KVIDIGETYASSEVRGTFGYLDPEYRSNC 486
+ I+HRD+KP+NIL+ E KL DFG+S ++ID + A+S V GT Y+ PE
Sbjct: 125 K--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFV-GTRSYMSPERLQGT 178
Query: 487 KVNSSGDVYSFGIVLLQILSGK 508
+ D++S G+ L+++ G+
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKL-SNNQHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL + + VAIK
Sbjct: 39 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 89
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 90 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 147
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 148 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 204
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 205 FGSAKQLVRGEPNVSYICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 254
Query: 505 LSGK 508
L G+
Sbjct: 255 LLGQ 258
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIK---HITNEGNVET-FVREVASSSHVRHPN 367
EK++EL G G G V+K + V + H+ + + +RE+ P
Sbjct: 9 EKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+V G E + E G+L + L + I +++I +GL +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 124
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLS-KVIDIGETYASSEVRGTFGYLDPEYRSNC 486
+ I+HRD+KP+NIL+ E KL DFG+S ++ID + A+S V GT Y+ PE
Sbjct: 125 K--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFV-GTRSYMSPERLQGT 178
Query: 487 KVNSSGDVYSFGIVLLQILSGK 508
+ D++S G+ L+++ G+
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIK---HITNEGNVET-FVREVASSSHVRHPN 367
EK++EL G G G V+K + V + H+ + + +RE+ P
Sbjct: 9 EKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+V G E + E G+L + L + I +++I +GL +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 124
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLS-KVIDIGETYASSEVRGTFGYLDPEYRSNC 486
+ I+HRD+KP+NIL+ E KL DFG+S ++ID + A+S V GT Y+ PE
Sbjct: 125 K--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFV-GTRSYMSPERLQGT 178
Query: 487 KVNSSGDVYSFGIVLLQILSGK 508
+ D++S G+ L+++ G+
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIK---HITNEGNVET-FVREVASSSHVRHPN 367
EK++EL G G G V+K + V + H+ + + +RE+ P
Sbjct: 9 EKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+V G E + E G+L + L + I +++I +GL +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 124
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLS-KVIDIGETYASSEVRGTFGYLDPEYRSNC 486
+ I+HRD+KP+NIL+ E KL DFG+S ++ID + A+S V GT Y+ PE
Sbjct: 125 K--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFV-GTRSYMSPERLQGT 178
Query: 487 KVNSSGDVYSFGIVLLQILSGK 508
+ D++S G+ L+++ G+
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 9 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 59
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 60 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 117
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 118 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 174
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 175 FGSAKQLVRGEPNVSXICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 224
Query: 505 LSGK 508
L G+
Sbjct: 225 LLGQ 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 20 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 70
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 71 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 128
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 129 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 185
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 186 FGSAKQLVRGEPNVSXICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 235
Query: 505 LSGK 508
L G+
Sbjct: 236 LLGQ 239
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 24/191 (12%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLI 384
TG Y K+ N + ++ + + + RE ++H N+V L +L+
Sbjct: 28 TGHEYAAKIINTKKLSAR------DHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLV 81
Query: 385 YELCPNGNLAEWLFGKD-----KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPT 439
++L G L E + ++ IQ++ A+ LH + G +VHRD+KP
Sbjct: 82 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAV--------LHCHQMG-VVHRDLKPE 132
Query: 440 NILLGPNFEA---KLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYS 496
N+LL + KL+DFGL+ + G+ A GT GYL PE D+++
Sbjct: 133 NLLLASKCKGAAVKLADFGLAIEVQ-GDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWA 191
Query: 497 FGIVLLQILSG 507
G++L +L G
Sbjct: 192 CGVILYILLVG 202
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 13 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 63
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 64 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 121
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 122 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 178
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 179 FGSAKQLVRGEPNVSXICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 228
Query: 505 LSGK 508
L G+
Sbjct: 229 LLGQ 232
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKL-SNNQHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL + + VAIK
Sbjct: 6 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 56
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 57 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 114
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 115 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 171
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 172 FGSAKQLVRGEPNVSYICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 221
Query: 505 LSGK 508
L G+
Sbjct: 222 LLGQ 225
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 318 NLIGEGITGKVYKGKLSNNQ----HVAIK----HITNEGNVETFVREVASSSHVRHPNLV 369
++G+G G V + +L VA+K I ++E F+RE A HP++
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 370 ALLGYCLR------VDECFLIYELCPNGNLAEWLF----GKDKCLSWIQRL-EIAIDSAR 418
L+G LR + +I +G+L +L G++ +Q L +D A
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASS-EVRGTFGY 477
G+ +L S + +HRD+ N +L + ++DFGLS+ I G+ Y + +
Sbjct: 149 GMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKW 205
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
L E ++ DV++FG+ + +I++
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 26/188 (13%)
Query: 313 KLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNEGNVETF----VREVASSSHVRHPN 367
K +L IG+G G+V+K + Q VA+K + E E F +RE+ ++H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 368 LVALLGYCLR----VDEC----FLIYELCPN---GNLAEWLFGKDKCLSWIQRLEIAIDS 416
+V L+ C + C +L+++ C + G L+ L LS I+R+ +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQML-- 134
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRG--- 473
GL+++H I+HRD+K N+L+ + KL+DFGL++ + + +
Sbjct: 135 LNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 474 TFGYLDPE 481
T Y PE
Sbjct: 192 TLWYRPPE 199
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 13 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 63
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 64 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 121
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 122 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 178
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 179 FGSAKQLVRGEPNVSXICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 228
Query: 505 LSGK 508
L G+
Sbjct: 229 LLGQ 232
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 304 IREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHV 363
++E+ E + +IG G G+V K+ N + + I N+ E R A ++
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKW--EMLKR--AETACF 137
Query: 364 RHPNLVALLGYCLRV----------DECFLIYELCPNGNLAEWL------FGKDKCLSWI 407
R V + G C + + +L+ + G+L L +D +I
Sbjct: 138 REERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYI 197
Query: 408 QRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA 467
+ +AIDS L + VHRDIKP N+LL N +L+DFG ++ T
Sbjct: 198 GEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQ 248
Query: 468 SSEVRGTFGYLDPEYRSNC-----KVNSSGDVYSFGIVLLQILSGK 508
SS GT Y+ PE K D +S G+ + ++L G+
Sbjct: 249 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKL-SNNQHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL + + VAIK
Sbjct: 80 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 130
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 131 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 188
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 189 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 245
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 246 FGSAKQLVRGEPNVSYICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 295
Query: 505 LSGK 508
L G+
Sbjct: 296 LLGQ 299
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIK---HITNEGNVET-FVREVASSSHVRHPN 367
EK++EL G G G V+K + V + H+ + + +RE+ P
Sbjct: 9 EKISEL---GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 368 LVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
+V G E + E G+L + L + I +++I +GL +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 124
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLS-KVIDIGETYASSEVRGTFGYLDPEYRSNC 486
+ I+HRD+KP+NIL+ E KL DFG+S ++ID + A+S V GT Y+ PE
Sbjct: 125 K--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFV-GTRSYMSPERLQGT 178
Query: 487 KVNSSGDVYSFGIVLLQILSGK 508
+ D++S G+ L+++ G+
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGN--------LAEWLFGKDKCLSWIQRLEIAIDSA 417
P ++ L E LI E G LAE + D Q LE
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILE------ 142
Query: 418 RGLWFLHSYSEGCIVHRDIKPTNILLG---PNFEAKLSDFGLSKVIDIGETYASSEVRGT 474
G+++LH + IVH D+KP NILL P + K+ DFG+S+ IG E+ GT
Sbjct: 143 -GVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHACELREIMGT 196
Query: 475 FGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSIE 534
YL PE + + ++ D+++ GI+ +L+ + + L +++ +YS E
Sbjct: 197 PEYLAPEILNYDPITTATDMWNIGIIAYMLLT-HTSPFVGEDNQETYLNISQVNVDYSEE 255
Query: 535 AFDLTLQLA 543
F QLA
Sbjct: 256 TFSSVSQLA 264
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 2 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 52
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 53 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 110
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 111 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 167
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 168 FGSAKQLVRGEPNVSXICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 217
Query: 505 LSGK 508
L G+
Sbjct: 218 LLGQ 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 48/249 (19%)
Query: 280 SNPPAKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKV---YKGKLSNN 336
S PPA+ G ++ + +R V+ +L +G G G V G+
Sbjct: 3 SPPPAR----SGFYRQEVTKTAWEVRAVY------RDLQPVGSGAYGAVCSAVDGR--TG 50
Query: 337 QHVAIKHITNEGNVETFV----REVASSSHVRHPNLVALLGYCL---RVDECFLIYELCP 389
VAIK + E F RE+ H+RH N++ LL +D+ Y + P
Sbjct: 51 AKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMP 110
Query: 390 --NGNLAEWL----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL 443
+L + + G+D+ + ++ +GL ++H+ I+HRD+KP N+ +
Sbjct: 111 FMGTDLGKLMKHEKLGEDRIQFLVYQM------LKGLRYIHA---AGIIHRDLKPGNLAV 161
Query: 444 GPNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDPEYRSN-CKVNSSGDVYSFGI 499
+ E K+ DFGL++ A SE+ G T Y PE N + + D++S G
Sbjct: 162 NEDCELKILDFGLAR-------QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGC 214
Query: 500 VLLQILSGK 508
++ ++++GK
Sbjct: 215 IMAEMITGK 223
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 92/226 (40%), Gaps = 31/226 (13%)
Query: 309 YATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNV---ETFVREVAS 359
+ +L+ +G G GKV + K VA+K + ++ E + E+
Sbjct: 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 79
Query: 360 SSHV-RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCL-------------- 404
S++ H N+V LLG C +I E C G+L +L K
Sbjct: 80 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 405 ---SWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVID 461
L + A+G+ FL S + CI HRD+ NILL K+ DFGL++ I
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLAS--KNCI-HRDLAARNILLTHGRITKICDFGLARDIK 196
Query: 462 IGETY-ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
Y R ++ PE NC DV+S+GI L ++ S
Sbjct: 197 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 15/204 (7%)
Query: 314 LNELNLIGEGITGKVYKGKLS----NNQHVAIK-----HITNEGNVETFVREVASSSHVR 364
L L +G+G G V +G+ VA+K ++ ++ F+REV + +
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH 424
H NL+ L G L ++ EL P G+L + L A+ A G+ +L
Sbjct: 80 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 425 SYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA--SSEVRGTFGYLDPEY 482
S +HRD+ N+LL K+ DFGL + + + + + F + PE
Sbjct: 139 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 195
Query: 483 RSNCKVNSSGDVYSFGIVLLQILS 506
+ + D + FG+ L ++ +
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 5 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 55
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 56 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 113
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 114 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 170
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 171 FGSAKQLVRGEPNVSXICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 220
Query: 505 LSGK 508
L G+
Sbjct: 221 LLGQ 224
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 1 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 51
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 52 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 166
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 167 FGSAKQLVRGEPNVSXICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 216
Query: 505 LSGK 508
L G+
Sbjct: 217 LLGQ 220
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 336 NQHVAIKHITNEGNV-ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLA 394
N+ VA+K+I + E RE+ + +RHPN+V L ++ E G L
Sbjct: 44 NELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELF 103
Query: 395 EWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL--GPNF 447
E + F +D+ + Q+L G+ + H+ + HRD+K N LL P
Sbjct: 104 ERICNAGRFSEDEARFFFQQL------ISGVSYAHAMQ---VAHRDLKLENTLLDGSPAP 154
Query: 448 EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSS-GDVYSFGIVLLQILS 506
K++DFG SK + + S V GT Y+ PE + + DV+S G+ L +L
Sbjct: 155 RLKIADFGYSKA-SVLHSQPKSAV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 507 G 507
G
Sbjct: 213 G 213
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 88/215 (40%), Gaps = 31/215 (14%)
Query: 320 IGEGITGKVYKG------KLSNNQHVAIKHITNEGNV---ETFVREVASSSHV-RHPNLV 369
+G G GKV + K VA+K + ++ E + E+ S++ H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCL-----------------SWIQRLEI 412
LLG C +I E C G+L +L K L
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEV 471
+ A+G+ FL S + CI HRD+ NILL K+ DFGL++ I Y
Sbjct: 167 SYQVAKGMAFLAS--KNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
R ++ PE NC DV+S+GI L ++ S
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 101/241 (41%), Gaps = 34/241 (14%)
Query: 296 DPGCPR--YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNE 347
D C R Y + + ++L +G G G+V + K + + VA+K + E
Sbjct: 9 DEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKE 67
Query: 348 GNVETFVREVASSSHV-----RHPNLVALLGYCLRVD-ECFLIYELCPNGNLAEWLFGK- 400
G + R + S + H N+V LLG C + +I E C GNL+ +L K
Sbjct: 68 GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 127
Query: 401 --------------DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPN 446
L+ + + A+G+ FL S CI HRD+ NILL
Sbjct: 128 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCI-HRDLAARNILLSEK 184
Query: 447 FEAKLSDFGLSK-VIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
K+ DFGL++ + + + R ++ PE + DV+SFG++L +I
Sbjct: 185 NVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
Query: 506 S 506
S
Sbjct: 245 S 245
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 15/204 (7%)
Query: 314 LNELNLIGEGITGKVYKGKLS----NNQHVAIK-----HITNEGNVETFVREVASSSHVR 364
L L +G+G G V +G+ VA+K ++ ++ F+REV + +
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH 424
H NL+ L G L ++ EL P G+L + L A+ A G+ +L
Sbjct: 70 HRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 425 SYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA--SSEVRGTFGYLDPEY 482
S +HRD+ N+LL K+ DFGL + + + + + F + PE
Sbjct: 129 SKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 185
Query: 483 RSNCKVNSSGDVYSFGIVLLQILS 506
+ + D + FG+ L ++ +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 1 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 51
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 52 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 166
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 167 FGSAKQLVRGEPNVSXICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 216
Query: 505 LSGK 508
L G+
Sbjct: 217 LLGQ 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 88/215 (40%), Gaps = 31/215 (14%)
Query: 320 IGEGITGKVYKG------KLSNNQHVAIKHITNEGNV---ETFVREVASSSHV-RHPNLV 369
+G G GKV + K VA+K + ++ E + E+ S++ H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCL-----------------SWIQRLEI 412
LLG C +I E C G+L +L K L
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEV 471
+ A+G+ FL S + CI HRD+ NILL K+ DFGL++ I Y
Sbjct: 174 SYQVAKGMAFLAS--KNCI-HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
R ++ PE NC DV+S+GI L ++ S
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 26/188 (13%)
Query: 313 KLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNEGNVETF----VREVASSSHVRHPN 367
K +L IG+G G+V+K + Q VA+K + E E F +RE+ ++H N
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 368 LVALLGYCLR----VDEC----FLIYELCPN---GNLAEWLFGKDKCLSWIQRLEIAIDS 416
+V L+ C + C +L+++ C + G L+ L LS I+R+ +
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQML-- 133
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRG--- 473
GL+++H I+HRD+K N+L+ + KL+DFGL++ + + +
Sbjct: 134 LNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 474 TFGYLDPE 481
T Y PE
Sbjct: 191 TLWYRPPE 198
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 88/215 (40%), Gaps = 31/215 (14%)
Query: 320 IGEGITGKVYKG------KLSNNQHVAIKHITNEGNV---ETFVREVASSSHV-RHPNLV 369
+G G GKV + K VA+K + ++ E + E+ S++ H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCL-----------------SWIQRLEI 412
LLG C +I E C G+L +L K L
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEV 471
+ A+G+ FL S + CI HRD+ NILL K+ DFGL++ I Y
Sbjct: 174 SYQVAKGMAFLAS--KNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
R ++ PE NC DV+S+GI L ++ S
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 40/217 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL + +++ EL + NL+ Q +++ +D R
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLS-------------QVIQMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 128 MSYLLYQMLVGIKHLHSAG-IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
T Y PE + D++S G+++ +++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 40/217 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL + +++ EL + NL+ Q +++ +D R
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLS-------------QVIQMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 128 MSYLLYQMLVGIKHLHSAG-IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
T Y PE + D++S G+++ +++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 1 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 51
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 52 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 166
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 167 FGSAKQLVRGEPNVSYICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 216
Query: 505 LSGK 508
L G+
Sbjct: 217 LLGQ 220
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 101/241 (41%), Gaps = 34/241 (14%)
Query: 296 DPGCPR--YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNE 347
D C R Y + + ++L +G G G+V + K + + VA+K + E
Sbjct: 9 DEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKE 67
Query: 348 GNVETFVREVASSSHV-----RHPNLVALLGYCLRVD-ECFLIYELCPNGNLAEWLFGK- 400
G + R + S + H N+V LLG C + +I E C GNL+ +L K
Sbjct: 68 GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 127
Query: 401 --------------DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPN 446
L+ + + A+G+ FL S CI HRD+ NILL
Sbjct: 128 NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCI-HRDLAARNILLSEK 184
Query: 447 FEAKLSDFGLSK-VIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQIL 505
K+ DFGL++ + + + R ++ PE + DV+SFG++L +I
Sbjct: 185 NVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
Query: 506 S 506
S
Sbjct: 245 S 245
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 88/215 (40%), Gaps = 31/215 (14%)
Query: 320 IGEGITGKVYKG------KLSNNQHVAIKHITNEGNV---ETFVREVASSSHV-RHPNLV 369
+G G GKV + K VA+K + ++ E + E+ S++ H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCL-----------------SWIQRLEI 412
LLG C +I E C G+L +L K L
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETY-ASSEV 471
+ A+G+ FL S + CI HRD+ NILL K+ DFGL++ I Y
Sbjct: 169 SYQVAKGMAFLAS--KNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
R ++ PE NC DV+S+GI L ++ S
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 26/188 (13%)
Query: 313 KLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNEGNVETF----VREVASSSHVRHPN 367
K +L IG+G G+V+K + Q VA+K + E E F +RE+ ++H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 368 LVALLGYCLR----VDEC----FLIYELCPN---GNLAEWLFGKDKCLSWIQRLEIAIDS 416
+V L+ C + C +L+++ C + G L+ L LS I+R+ +
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQML-- 134
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRG--- 473
GL+++H I+HRD+K N+L+ + KL+DFGL++ + + +
Sbjct: 135 LNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 474 TFGYLDPE 481
T Y PE
Sbjct: 192 TLWYRPPE 199
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 27/203 (13%)
Query: 320 IGEGITGKVYKG-KLSNNQHVAIKHITNEGNVETFV----REVASSSHVRHPNLVALL-- 372
+G G G V + + VAIK ++ E F RE+ H++H N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 373 ---GYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEG 429
LR F + +L + + G + IQ L +GL ++HS
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQK-IMGMEFSEEKIQYL--VYQMLKGLKYIHS---A 163
Query: 430 CIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDPEY-RSN 485
+VHRD+KP N+ + + E K+ DFGL++ +A +E+ G T Y PE S
Sbjct: 164 GVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEVILSW 216
Query: 486 CKVNSSGDVYSFGIVLLQILSGK 508
N + D++S G ++ ++L+GK
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 26/188 (13%)
Query: 313 KLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNEGNVETF----VREVASSSHVRHPN 367
K +L IG+G G+V+K + Q VA+K + E E F +RE+ ++H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 368 LVALLGYCLR----VDEC----FLIYELCPN---GNLAEWLFGKDKCLSWIQRLEIAIDS 416
+V L+ C + C +L+++ C + G L+ L LS I+R+ +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQML-- 134
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRG--- 473
GL+++H I+HRD+K N+L+ + KL+DFGL++ + + +
Sbjct: 135 LNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 474 TFGYLDPE 481
T Y PE
Sbjct: 192 TLWYRPPE 199
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 314 LNELNLIGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREVASSSHVRHPN 367
N L ++G+G GKV + + AIK + + +VE + E + + P
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 368 LVALLGYCLR-VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSY 426
+ L C + VD + + E G+L + K Q + A + + GL+FLH
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK-FKEPQAVFYAAEISIGLFFLHKR 139
Query: 427 SEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNC 486
I++RD+K N++L K++DFG+ K + + + E GT Y+ PE +
Sbjct: 140 G---IIYRDLKLDNVMLDSEGHIKIADFGMCKE-HMMDGVTTREFCGTPDYIAPEIIAYQ 195
Query: 487 KVNSSGDVYSFGIVLLQILSGK 508
S D +++G++L ++L+G+
Sbjct: 196 PYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 17/224 (7%)
Query: 293 QLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHIT----NE 347
Q + PG + + ++ + +GEG G+VYK N+ VAIK I E
Sbjct: 15 QTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEE 74
Query: 348 GNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWI 407
G T +REV+ ++H N++ L LI+E N +L +++ K+ +S
Sbjct: 75 GVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYM-DKNPDVSMR 132
Query: 408 QRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-----KLSDFGLSKVIDI 462
G+ F H S C+ HRD+KP N+LL + + K+ DFGL++ I
Sbjct: 133 VIKSFLYQLINGVNFCH--SRRCL-HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189
Query: 463 GETYASSEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQIL 505
+ E+ T Y PE + ++S D++S + ++L
Sbjct: 190 PIRQFTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 21/198 (10%)
Query: 320 IGEGITGKV--YKGKLSNNQHVAIK--HITNEGNVETFVREVASSSHVRHPNLVALLGYC 375
IGEG TG V + K S Q VA+K + + E EV +H N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQ-VAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 376 LRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSA-----RGLWFLHSYSEGC 430
L +E +++ E G L + +S ++ E I + + L +LH+
Sbjct: 112 LVGEELWVLMEFLQGGALTD-------IVSQVRLNEEQIATVCEAVLQALAYLHAQG--- 161
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNS 490
++HRDIK +ILL + KLSDFG I + + GT ++ PE S +
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQIS-KDVPKRKXLVGTPYWMAPEVISRSLYAT 220
Query: 491 SGDVYSFGIVLLQILSGK 508
D++S GI++++++ G+
Sbjct: 221 EVDIWSLGIMVIEMVDGE 238
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V + H VA+K ++ + + RE+
Sbjct: 22 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 137
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 138 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 185
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 43/227 (18%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V + H VA+K ++ + + RE+
Sbjct: 12 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 358 ASSSHVRHPNLVALLGY---CLRVDECFLIYELCPNGNLAEWLFGKD-----KCLSW--- 406
H++H N++ LL ++E +Y L L G D KC
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMGADLNNIVKCAKLTDD 121
Query: 407 -IQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET 465
+Q L I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D
Sbjct: 122 HVQFLIYQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---- 172
Query: 466 YASSEVRG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
E+ G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 173 ---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V + H VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 32/233 (13%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVR 355
Y + + ++L +G G G+V + K + + VA+K + EG + R
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHR 66
Query: 356 EVASSSHV-----RHPNLVALLGYCLRVD-ECFLIYELCPNGNLAEWLFGK--------- 400
+ S + H N+V LLG C + +I E C GNL+ +L K
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 401 ------DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
L+ + + A+G+ FL S CI HRD+ NILL K+ DF
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDF 183
Query: 455 GLSK-VIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL++ + + + R ++ PE + DV+SFG++L +I S
Sbjct: 184 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 34/205 (16%)
Query: 314 LNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVE--TFVREVASSSHVRHPNLVAL 371
+E+ L+ + +TGK++ A+K I + E+A ++H N+V L
Sbjct: 22 FSEVFLVKQRLTGKLF----------ALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTL 71
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFG------KDKCLSWIQRLEIAIDSARGLWFLHS 425
+L+ +L G L + + KD L IQ++ A+ +LH
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLV-IQQVLSAVK------YLH- 123
Query: 426 YSEGCIVHRDIKPTNIL-LGPNFEAK--LSDFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
E IVHRD+KP N+L L P +K ++DFGLSK+ G S GT GY+ PE
Sbjct: 124 --ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYVAPEV 178
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSG 507
+ + + D +S G++ +L G
Sbjct: 179 LAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V + H VA+K ++ + + RE+
Sbjct: 12 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 127
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 128 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 175
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V + H VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V + H VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V + H VA+K ++ + + RE+
Sbjct: 36 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 151
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 152 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 199
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 200 XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V + H VA+K ++ + + RE+
Sbjct: 36 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 151
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 152 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 199
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 200 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V + H VA+K ++ + + RE+
Sbjct: 12 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 127
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 128 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 175
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 176 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 32/233 (13%)
Query: 302 YTIREVHYATEKLNELNLIGEGITGKVYKG------KLSNNQHVAIKHITNEGNVETFVR 355
Y + + ++L +G G G+V + K + + VA+K + EG + R
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHR 66
Query: 356 EVASSSHV-----RHPNLVALLGYCLRVD-ECFLIYELCPNGNLAEWLFGK--------- 400
+ S + H N+V LLG C + +I E C GNL+ +L K
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 401 ------DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDF 454
L+ + + A+G+ FL S CI HRD+ NILL K+ DF
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDF 183
Query: 455 GLSK-VIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
GL++ + + + R ++ PE + DV+SFG++L +I S
Sbjct: 184 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 301 RYTIREVHYATEKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNE-----GNVETFV 354
R T+ E Y L L+G+G GKV K + ++ A+K + E V +
Sbjct: 144 RVTMNEFEY-------LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL 196
Query: 355 REVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNL-----AEWLFGKDKCLSWIQR 409
E + RHP L AL D + E G L E +F +D+ +
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 256
Query: 410 LEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKV-IDIGETYAS 468
+ A+D +LHS E +V+RD+K N++L + K++DFGL K I G T +
Sbjct: 257 IVSALD------YLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 308
Query: 469 SEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
GT YL PE + + D + G+V+ +++ G+
Sbjct: 309 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRL 410
E+F + S + H +LV G C+ DE L+ E G+L +L C++ + +L
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL 116
Query: 411 EIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL---------GPNFEAKLSDFGLSKVID 461
E+A A + FL E ++H ++ NILL P F KLSD G+S +
Sbjct: 117 EVAKQLAAAMHFL---EENTLIHGNVCAKNILLIREEDRKTGNPPF-IKLSDPGISITV- 171
Query: 462 IGETYASSEVRGTFGYLDPEYRSNCK-VNSSGDVYSFGIVLLQILSG 507
++ ++ PE N K +N + D +SFG L +I SG
Sbjct: 172 ----LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V + H VA+K ++ + + RE+
Sbjct: 35 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 91
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 92 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 150
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 151 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 198
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 199 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 77 NPHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAK 129
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 301 RYTIREVHYATEKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNE-----GNVETFV 354
R T+ E Y L L+G+G GKV K + ++ A+K + E V +
Sbjct: 147 RVTMNEFEY-------LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL 199
Query: 355 REVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNL-----AEWLFGKDKCLSWIQR 409
E + RHP L AL D + E G L E +F +D+ +
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 410 LEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKV-IDIGETYAS 468
+ A+D +LHS E +V+RD+K N++L + K++DFGL K I G T +
Sbjct: 260 IVSALD------YLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 311
Query: 469 SEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
GT YL PE + + D + G+V+ +++ G+
Sbjct: 312 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 301 RYTIREVHYATEKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNE-----GNVETFV 354
R T+ E Y L L+G+G GKV K + ++ A+K + E V +
Sbjct: 5 RVTMNEFEY-------LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL 57
Query: 355 REVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNL-----AEWLFGKDKCLSWIQR 409
E + RHP L AL D + E G L E +F +D+ +
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 117
Query: 410 LEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASS 469
+ A+D +LHS E +V+RD+K N++L + K++DFGL K I +
Sbjct: 118 IVSALD------YLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMK 168
Query: 470 EVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
GT YL PE + + D + G+V+ +++ G+
Sbjct: 169 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 33/206 (16%)
Query: 320 IGEGITGKVYKG-KLSNNQHVAIKHITNEGNVETFV----REVASSSHVRHPNLVALL-- 372
+G G G V + + VAIK ++ E F RE+ H++H N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 373 ---GYCLRVDECFLIYELCPNGNLAEWL---FGKDKCLSWIQRLEIAIDSARGLWFLHSY 426
LR F + +L + + F ++K + ++ +GL ++HS
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQM------LKGLKYIHS- 144
Query: 427 SEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDPEY- 482
+VHRD+KP N+ + + E K+ DFGL++ +A +E+ G T Y PE
Sbjct: 145 --AGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEVI 195
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSGK 508
S N + D++S G ++ ++L+GK
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 30/190 (15%)
Query: 329 YKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELC 388
Y K+ N + ++ + + + RE ++HPN+V L +L+++L
Sbjct: 59 YAAKIINTKKLSAR------DHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 112
Query: 389 PNGNLAEWLFGKD--------KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTN 440
G L E + ++ C+ I ++S +H + IVHRD+KP N
Sbjct: 113 TGGELFEDIVAREYYSEADASHCIHQI------LESVN---HIHQHD---IVHRDLKPEN 160
Query: 441 ILLGPNFEA---KLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSF 497
+LL + KL+DFGL+ + GE A GT GYL PE D+++
Sbjct: 161 LLLASKCKGAAVKLADFGLAIEVQ-GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWAC 219
Query: 498 GIVLLQILSG 507
G++L +L G
Sbjct: 220 GVILYILLVG 229
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 301 RYTIREVHYATEKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNE-----GNVETFV 354
R T+ E Y L L+G+G GKV K + ++ A+K + E V +
Sbjct: 4 RVTMNEFEY-------LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL 56
Query: 355 REVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNL-----AEWLFGKDKCLSWIQR 409
E + RHP L AL D + E G L E +F +D+ +
Sbjct: 57 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 116
Query: 410 LEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASS 469
+ A+D +LHS E +V+RD+K N++L + K++DFGL K I +
Sbjct: 117 IVSALD------YLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMK 167
Query: 470 EVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
GT YL PE + + D + G+V+ +++ G+
Sbjct: 168 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 38/217 (17%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q +++ +D R
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLX-------------QVIQMELDHER 127
Query: 419 GLWFLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
+ L+ G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 128 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPY 185
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 37/247 (14%)
Query: 277 YYKSNPPAKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKG-KLSN 335
Y++SN + +F +L TI EV E+ L+ +G G G V
Sbjct: 19 YFQSNASQERPTFYRQELNK------TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKT 69
Query: 336 NQHVAIKHITNEG----NVETFVREVASSSHVRHPNLVALLGYCL------RVDECFLIY 385
VA+K ++ + + RE+ H++H N++ LL ++ +L+
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 129
Query: 386 ELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGP 445
L +L + + +Q L I RGL ++HS I+HRD+KP+N+ +
Sbjct: 130 HLM-GADLNNIVKCQKLTDDHVQFLIYQI--LRGLKYIHS---ADIIHRDLKPSNLAVNE 183
Query: 446 NFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVL 501
+ E K+ DFGL++ D E+ G T Y PE N N + D++S G ++
Sbjct: 184 DCELKILDFGLARHTD-------DEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 236
Query: 502 LQILSGK 508
++L+G+
Sbjct: 237 AELLTGR 243
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ IG G G V VA+K ++ + + RE+
Sbjct: 21 TIWEV---PERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 136
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 137 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-------DEM 184
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLS 405
E REV+ V H N++ L + LI EL G L ++L +++ S
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 406 WIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLG----PNFEAKLSDFGLSKVID 461
+I+++ G+ +LH+ I H D+KP NI+L P KL DFGL+ I+
Sbjct: 120 FIKQI------LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 462 IGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
G + + + GT ++ PE + + D++S G++ +LSG
Sbjct: 171 DGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 76 NPHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q +++ +D R
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLX-------------QVIQMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 317 LNLIGEGITGKV-YKGKLSNNQHVAIKHITNE-----GNVETFVREVASSSHVRHPNLVA 370
L IG+G GKV K + A+K++ + V +E+ + HP LV
Sbjct: 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVN 79
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHS 425
L ++ F++ +L G+L L F ++ +I L +A+D +
Sbjct: 80 LWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQN------ 133
Query: 426 YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY--- 482
I+HRD+KP NILL + ++DF ++ ++ ET ++ + GT Y+ PE
Sbjct: 134 ---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP-RETQITT-MAGTKPYMAPEMFSS 188
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSGKKAKVLTRAGSALELA 523
R + + D +S G+ ++L G++ + + S+ E+
Sbjct: 189 RKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 33/228 (14%)
Query: 307 VHYATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHITN-EGNVETFVREV---ASSS 361
+ YA++ E+ ++G+G G+V K + + ++++ AIK I + E + T + EV AS +
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 362 H---VRH-------PNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H VR+ N V + + F+ E C NG L + + ++ +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI----DI----- 462
+ L ++HS I+HRD+KP NI + + K+ DFGL+K + DI
Sbjct: 121 LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 463 ----GETYASSEVRGTFGYLDPEYRSNC-KVNSSGDVYSFGIVLLQIL 505
G + + GT Y+ E N D+YS GI+ +++
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHITNEG----NVETFVREV 357
TI EV E+ L +G G G V + H VA+K ++ + + RE+
Sbjct: 26 TIWEV---PERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 82
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 83 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 141
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 142 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 189
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 190 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLS 405
E REV+ V H N++ L + LI EL G L ++L +++ S
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 406 WIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLG----PNFEAKLSDFGLSKVID 461
+I+++ +D G+ +LH+ I H D+KP NI+L P KL DFGL+ I+
Sbjct: 120 FIKQI---LD---GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 462 IGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
G + + + GT ++ PE + + D++S G++ +LSG
Sbjct: 171 DGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLS 405
E REV+ V H N++ L + LI EL G L ++L +++ S
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 406 WIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLG----PNFEAKLSDFGLSKVID 461
+I+++ +D G+ +LH+ I H D+KP NI+L P KL DFGL+ I+
Sbjct: 120 FIKQI---LD---GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 462 IGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
G + + + GT ++ PE + + D++S G++ +LSG
Sbjct: 171 DGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 110/269 (40%), Gaps = 38/269 (14%)
Query: 309 YATEKLNELNLIGEGITGKV---YKGKLSNNQH--VAIKHITNEG--NVETFVREVASSS 361
+ L ++ +G+G G V L +N VA+K + + G F RE+
Sbjct: 7 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 66
Query: 362 HVRHPNLVALLG--YCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARG 419
+ +V G Y L+ E P+G L ++L QR +D++R
Sbjct: 67 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL----------QRHRARLDASRL 116
Query: 420 LWFLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
L + +G VHRD+ NIL+ K++DFGL+K++ + + Y
Sbjct: 117 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP 176
Query: 473 GT---FGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS------GKKAKVLTRAGSALELA 523
G F Y PE S+ + DV+SFG+VL ++ + A+ L GS ++
Sbjct: 177 GQSPIFWYA-PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDV- 234
Query: 524 DPKLDREYSIEAFDLTLQLALSCTALTHQ 552
P L R + L +C A H+
Sbjct: 235 -PALSRLLELLEEGQRLPAPPACPAEVHE 262
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 320 IGEGITGKVYKGKL------SNNQHVAIKHITNEGN---VETFVREVASSSHVRHPNLVA 370
+GEG GKV K + VA+K + + + + E V HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWL-----------------------FGKDKCLSWI 407
L G C + LI E G+L +L ++ L+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 408 QRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA 467
+ A ++G+ +L +E +VHRD+ NIL+ + K+SDFGLS+ + ++Y
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 468 S-SEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
S+ R ++ E + + DV+SFG++L +I++
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 77 NPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 129
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 76 NPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 79 NPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 131
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLS 405
E REV+ V H N++ L + LI EL G L ++L +++ S
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 406 WIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLG----PNFEAKLSDFGLSKVID 461
+I+++ +D G+ +LH+ I H D+KP NI+L P KL DFGL+ I+
Sbjct: 120 FIKQI---LD---GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 462 IGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
G + + + GT ++ PE + + D++S G++ +LSG
Sbjct: 171 DGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 21 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 136
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 137 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-------DEM 184
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 317 LNLIGEGITGKVYKGKLS-NNQHVAIKHITNEGNVET----FVREVASSSHVRHPNLVAL 371
+ IG G G V + Q VAIK I N +V T +RE+ H +H N++A+
Sbjct: 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI 118
Query: 372 LGYCLR-------VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH 424
LR +++ +L +L + + + L+ RGL ++H
Sbjct: 119 KD-ILRPTVPYGEFKSVYVVLDLM-ESDLHQ-IIHSSQPLTLEHVRYFLYQLLRGLKYMH 175
Query: 425 SYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI---DIGETYASSEVRGTFGYLDPE 481
S ++HRD+KP+N+L+ N E K+ DFG+++ + Y +E T Y PE
Sbjct: 176 S---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 482 YR-SNCKVNSSGDVYSFGIVLLQILSGKK 509
S + + D++S G + ++L+ ++
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 27 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 142
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 143 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-------DEM 190
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 78 NPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 130
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 351 ETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLS 405
E REV+ V H N++ L + LI EL G L ++L +++ S
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 406 WIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLG----PNFEAKLSDFGLSKVID 461
+I+++ +D G+ +LH+ I H D+KP NI+L P KL DFGL+ I+
Sbjct: 120 FIKQI---LD---GVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 462 IGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
G + + + GT ++ PE + + D++S G++ +LSG
Sbjct: 171 DGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q +++ +D R
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC-------------QVIQMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 75/177 (42%), Gaps = 8/177 (4%)
Query: 335 NNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLA 394
+NQ A+K I+ T A HPN+V L FL+ EL G L
Sbjct: 35 SNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILL---GPNFEAKL 451
E + K K S + I + +H +VHRD+KP N+L N E K+
Sbjct: 95 ERI-KKKKHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKI 150
Query: 452 SDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
DFG +++ + T Y PE + + S D++S G++L +LSG+
Sbjct: 151 IDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 317 LNLIGEGITGKVYKGKLS-NNQHVAIKHITNEGNVET----FVREVASSSHVRHPNLVAL 371
+ IG G G V + Q VAIK I N +V T +RE+ H +H N++A+
Sbjct: 60 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI 119
Query: 372 LGYCLR-------VDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH 424
LR +++ +L +L + + + L+ RGL ++H
Sbjct: 120 KD-ILRPTVPYGEFKSVYVVLDLM-ESDLHQ-IIHSSQPLTLEHVRYFLYQLLRGLKYMH 176
Query: 425 SYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI---DIGETYASSEVRGTFGYLDPE 481
S ++HRD+KP+N+L+ N E K+ DFG+++ + Y +E T Y PE
Sbjct: 177 S---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 482 YR-SNCKVNSSGDVYSFGIVLLQILSGKK 509
S + + D++S G + ++L+ ++
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 86 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 138
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 139 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 23 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 138
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ + + E+
Sbjct: 139 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEM 186
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 1 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 51
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 52 KVLQGKAFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 166
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 167 FGSAKQLVRGEPNVSYICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 216
Query: 505 LSGK 508
L G+
Sbjct: 217 LLGQ 220
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 80 NPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 132
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 1 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 51
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 52 KVLQGKAFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 166
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 167 FGSAKQLVRGEPNVSYICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 216
Query: 505 LSGK 508
L G+
Sbjct: 217 LLGQ 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 43/227 (18%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 23 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 358 ASSSHVRHPNLVALLGY---CLRVDECFLIYELCPNGNLAEWLFGKD-----KCLSW--- 406
H++H N++ LL ++E +Y L L G D KC
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMGADLNNIVKCQKLTDD 132
Query: 407 -IQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET 465
+Q L I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++
Sbjct: 133 HVQFLIYQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR------- 180
Query: 466 YASSEVRG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
+ + E+ G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 181 HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 76 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 76 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSNC-KVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 314 LNELNLIGEGITGKV--YKGKLSNN---QHVAIKHITNEGNVET---FVREVASSSHVRH 365
L ++ +GEG GKV Y +N+ + VA+K + + + + +E+ + H
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYH 75
Query: 366 PNLVALLGYCLRVDE--CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFL 423
+++ G C E L+ E P G+L ++L + Q L A G+ +L
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYL 133
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDP 480
HS +HR++ N+LL + K+ DFGL+K + G Y G F Y P
Sbjct: 134 HSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-P 189
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILS 506
E K + DV+SFG+ L ++L+
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 78/188 (41%), Gaps = 26/188 (13%)
Query: 291 GVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITN---E 347
G+Q K R I E+H I G G V G S VAIK + N +
Sbjct: 1 GMQAKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSD 60
Query: 348 GNV----------ETFVREVASSSHVRHPNLVALLGYCLRVDE-----CFLIYELCPNGN 392
G + +RE+ +H HPN++ L + +E +L+ EL +
Sbjct: 61 GRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTD 119
Query: 393 LAEWLFGKDKCLS--WIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAK 450
LA+ + + +S IQ I L LH E +VHRD+ P NILL N +
Sbjct: 120 LAQVIHDQRIVISPQHIQYFMYHI-----LLGLHVLHEAGVVHRDLHPGNILLADNNDIT 174
Query: 451 LSDFGLSK 458
+ DF L++
Sbjct: 175 ICDFNLAR 182
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 79 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 131
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 79 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 131
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 82 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 134
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 135 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 309 YATEKLNELNLIGEGITGKVYKGKL-----SNNQHVAIKHITNEGNVETF---VREVASS 360
+ +L +L ++G G+ G V+KG S V IK I ++ ++F + +
Sbjct: 10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 69
Query: 361 SHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL 420
+ H ++V LLG C L+ + P G+L + + L L + A+G+
Sbjct: 70 GSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGM 128
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGE-TYASSEVRGTFGYLD 479
++L + +VHR++ N+LL + +++DFG++ ++ + SE + ++
Sbjct: 129 YYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILS 506
E K DV+S+G+ + ++++
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 23 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 138
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ + + E+
Sbjct: 139 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEM 186
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 23/199 (11%)
Query: 320 IGEGITG--KVYKGKLSNNQHVAIKHITNEGNV-ETFVREVASSSHVRHPNLVALLGYCL 376
IG G G ++ + K SN + VA+K+I + E RE+ + +RHPN+V L
Sbjct: 26 IGSGNFGVARLMRDKQSN-ELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 377 RVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
++ E G L E + F +D+ + Q+L G+ + H+ +
Sbjct: 85 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCHAMQ---V 135
Query: 432 VHRDIKPTNILL--GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVN 489
HRD+K N LL P K+ DFG SK + + S V GT Y+ PE + +
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQPKSTV-GTPAYIAPEVLLKKEYD 193
Query: 490 SS-GDVYSFGIVLLQILSG 507
DV+S G+ L +L G
Sbjct: 194 GKVADVWSCGVTLYVMLVG 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 309 YATEKLNELNLIGEGITGKVYKGKL-----SNNQHVAIKHITNEGNVETF---VREVASS 360
+ +L +L ++G G+ G V+KG S V IK I ++ ++F + +
Sbjct: 28 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 87
Query: 361 SHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL 420
+ H ++V LLG C L+ + P G+L + + L L + A+G+
Sbjct: 88 GSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGM 146
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGE-TYASSEVRGTFGYLD 479
++L + +VHR++ N+LL + +++DFG++ ++ + SE + ++
Sbjct: 147 YYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILS 506
E K DV+S+G+ + ++++
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 70 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 122
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 123 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 40/217 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL + +++ EL + NL+ Q +++ +D R
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLS-------------QVIQMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 128 MSYLLYQMLVGIKHLHSAG-IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
T Y PE + D++S G ++ +++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 40/217 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL + +++ EL + NL+ Q +++ +D R
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLS-------------QVIQMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
T Y PE + D++S G ++ +++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 79 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 131
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 83 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 135
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 18 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 133
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 134 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTD-------DEM 181
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 22 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 137
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 138 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTD-------DEM 185
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 43/227 (18%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V + + +A+K ++ + + RE+
Sbjct: 45 TIWEV---PERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYREL 101
Query: 358 ASSSHVRHPNLVALLGY---CLRVDECFLIYELCPNGNLAEWLFGKD-----KCLSW--- 406
H++H N++ LL ++E +Y L L G D KC
Sbjct: 102 RLLKHMKHENVIGLLDVFTPATSLEEFNDVY-------LVTHLMGADLNNIVKCQKLTDD 154
Query: 407 -IQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET 465
+Q L I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D
Sbjct: 155 HVQFLIYQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD---- 205
Query: 466 YASSEVRG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
E+ G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 206 ---DEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 78 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 130
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKSQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL + D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 101 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 153
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 154 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 1 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 51
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCL----RVDECFL--IYELCPNG--NLA 394
+ + RE+ + H N+V L + + DE +L + + P +A
Sbjct: 52 KVLQGKAFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVA 109
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 166
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 167 FGSAKQLVRGEPNVSXICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 216
Query: 505 LSGK 508
L G+
Sbjct: 217 LLGQ 220
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 36/220 (16%)
Query: 320 IGEGITGKVYKGKL------SNNQHVAIKHITNEGN---VETFVREVASSSHVRHPNLVA 370
+GEG GKV K + VA+K + + + + E V HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWL-----------------------FGKDKCLSWI 407
L G C + LI E G+L +L ++ L+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 408 QRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSK-VIDIGETY 466
+ A ++G+ +L +E +VHRD+ NIL+ + K+SDFGLS+ V +
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
S+ R ++ E + + DV+SFG++L +I++
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 104/244 (42%), Gaps = 43/244 (17%)
Query: 284 AKITSFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNN-QHVAIK 342
+K+T+ + P P+ EV Y K+ IG G G VY+ KL ++ + VAIK
Sbjct: 1 SKVTTVVATPGQGPDRPQ----EVSYTDTKV-----IGNGSFGVVYQAKLCDSGELVAIK 51
Query: 343 HITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE------CFLIYELCPNG--NLA 394
+ + + RE+ + H N+V L + E L+ + P +A
Sbjct: 52 KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVA 109
Query: 395 EWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEA-KLSD 453
+ L I R L ++HS+ I HRDIKP N+LL P+ KL D
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCD 166
Query: 454 FGLSKVIDIGET---------YASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQI 504
FG +K + GE Y + E+ FG D SS DV+S G VL ++
Sbjct: 167 FGSAKQLVRGEPNVSXICSRYYRAPEL--IFGATD--------YTSSIDVWSAGCVLAEL 216
Query: 505 LSGK 508
L G+
Sbjct: 217 LLGQ 220
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 38/217 (17%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q +++ +D R
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLX-------------QVIQMELDHER 127
Query: 419 GLWFLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
+ L+ G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 128 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPY 185
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 27 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 142
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 143 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 190
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGK-LSNNQHVAI-------KHITNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG + + V I + T+ + + E + V
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 110 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 162
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 163 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 219
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 18 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 133
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 134 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 181
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 23 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 138
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 139 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 186
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 312 EKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNEGNVETFVREVA----SSSHVRHP 366
+ L + +G G G V K + + + Q +A+K I N + R + S V P
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 110
Query: 367 NLVALLGYCLRVDECFLIYELCPNG--NLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH 424
V G R + ++ EL + + K + + +IA+ + L LH
Sbjct: 111 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 170
Query: 425 SYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRS 484
S + ++HRD+KP+N+L+ + K+ DFG+S + ++ A + G Y+ PE R
Sbjct: 171 S--KLSVIHRDVKPSNVLINALGQVKMCDFGISGY--LVDSVAKTIDAGCKPYMAPE-RI 225
Query: 485 NCKVNSSG-----DVYSFGIVLLQI 504
N ++N G D++S GI ++++
Sbjct: 226 NPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 382 FLIYELCPNGNLAEWLFGKDKCLSWIQR-----LEIAIDSARGLWFLHSYSEGCIVHRDI 436
++ +LC NL +W+ ++ S R L I I A + FLHS ++HRD+
Sbjct: 137 YIQMQLCRKENLKDWM---NRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDL 190
Query: 437 KPTNILLGPNFEAKLSDFGLSKVIDIGE----------TYASSEVR-GTFGYLDPEYRSN 485
KP+NI + K+ DFGL +D E YA+ + GT Y+ PE
Sbjct: 191 KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHG 250
Query: 486 CKVNSSGDVYSFGIVLLQIL 505
+ D++S G++L ++L
Sbjct: 251 NNYSHKVDIFSLGLILFELL 270
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 28 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYREL 84
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 143
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 144 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 191
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 28 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 143
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 144 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 191
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 38/217 (17%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 74
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q +++ +D R
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLX-------------QVIQMELDHER 120
Query: 419 GLWFLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
+ L+ G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 121 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPY 178
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 28 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 143
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 144 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 191
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 18 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 133
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 134 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 181
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ + E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 40/217 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL + +++ EL + NL+ Q +++ +D R
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLS-------------QVIQMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
T Y PE + D++S G ++ +++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNS 490
IV+RD+KP NILL + ++SD GL+ + G+T GT GY+ PE N +
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV--GTVGYMAPEVVKNERYTF 364
Query: 491 SGDVYSFGIVLLQILSGK 508
S D ++ G +L ++++G+
Sbjct: 365 SPDWWALGCLLYEMIAGQ 382
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 21 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 136
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 137 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 184
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 15 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 71
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 72 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 130
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 131 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 178
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 179 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ + E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNS 490
IV+RD+KP NILL + ++SD GL+ + G+T GT GY+ PE N +
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV--GTVGYMAPEVVKNERYTF 364
Query: 491 SGDVYSFGIVLLQILSGK 508
S D ++ G +L ++++G+
Sbjct: 365 SPDWWALGCLLYEMIAGQ 382
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 22 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 137
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 138 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 185
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 35 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 91
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 92 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 150
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 151 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 198
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 199 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 21 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 136
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 137 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 184
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 36 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 151
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 152 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 199
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 200 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 22 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 137
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 138 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 185
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 18 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 133
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 134 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 181
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 43/216 (19%)
Query: 318 NLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETF---------VREVASSSHVRHPNL 368
+L+GEG G V + H I +E F +RE+ H +H N+
Sbjct: 17 SLLGEGAYGVV-----CSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 369 VALLGYCLRVD------ECFLIYELCP---NGNLAEWLFGKDKCLSWIQRLEIAIDSARG 419
+ + R D E ++I EL + ++ + D +I + + R
Sbjct: 72 ITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ------TLRA 124
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVID---------IGETYASSE 470
+ LH + ++HRD+KP+N+L+ N + K+ DFGL+++ID G+ +E
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 471 VRGTFGYLDPEYR-SNCKVNSSGDVYSFGIVLLQIL 505
T Y PE ++ K + + DV+S G +L ++
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ + E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 13 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 70 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 128
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 129 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 176
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 177 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 13 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 70 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 128
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 129 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 176
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 177 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 15/188 (7%)
Query: 322 EGITGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDEC 381
E TG+V+ K N + K+ T E++ + + HP L+ L E
Sbjct: 72 EKATGRVFVAKFINTPYPLDKY--------TVKNEISIMNQLHHPKLINLHDAFEDKYEM 123
Query: 382 FLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNI 441
LI E G L + + +D +S + + + GL +H +S IVH DIKP NI
Sbjct: 124 VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENI 180
Query: 442 L--LGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGI 499
+ K+ DFGL+ ++ E + F PE V D+++ G+
Sbjct: 181 MCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAA--PEIVDREPVGFYTDMWAIGV 238
Query: 500 VLLQILSG 507
+ +LSG
Sbjct: 239 LGYVLLSG 246
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 43/216 (19%)
Query: 318 NLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETF---------VREVASSSHVRHPNL 368
+L+GEG G V + H I +E F +RE+ H +H N+
Sbjct: 17 SLLGEGAYGVV-----CSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 369 VALLGYCLRVD------ECFLIYELCP---NGNLAEWLFGKDKCLSWIQRLEIAIDSARG 419
+ + R D E ++I EL + ++ + D +I + + R
Sbjct: 72 ITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ------TLRA 124
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVID---------IGETYASSE 470
+ LH ++HRD+KP+N+L+ N + K+ DFGL+++ID G+ +E
Sbjct: 125 VKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 471 VRGTFGYLDPEYR-SNCKVNSSGDVYSFGIVLLQIL 505
T Y PE ++ K + + DV+S G +L ++
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 12 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 127
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 128 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 175
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 39 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 154
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 155 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 202
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 203 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 14 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 70
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 71 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 129
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DFGL++ D E+
Sbjct: 130 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-------DEM 177
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 178 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 22/215 (10%)
Query: 309 YATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHI---TNEGNVETFVRE---VASSS 361
+ E L +L IG G G V K + Q +A+K I +E + + + V SS
Sbjct: 19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSS 78
Query: 362 HVRHPNLVALLGYCLRVDECFLIYELCPNG--NLAEWLFGK-DKCLSWIQRLEIAIDSAR 418
P +V G R +C++ EL ++++ D + +I + + +
Sbjct: 79 DC--PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVK 136
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYL 478
L L + I+HRDIKP+NILL + KL DFG+S + ++ A + G Y+
Sbjct: 137 ALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISG--QLVDSIAKTRDAGCRPYM 192
Query: 479 DPEYRSNCKVNSSG-----DVYSFGIVLLQILSGK 508
PE R + + G DV+S GI L ++ +G+
Sbjct: 193 APE-RIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 314 LNELNLIGEGITGKV--YKGKLSNN---QHVAIKHITNEGNVET---FVREVASSSHVRH 365
L ++ +GEG GKV Y +N+ + VA+K + + + + +E+ + H
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYH 75
Query: 366 PNLVALLGYCLRVDE--CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFL 423
+++ G C E L+ E P G+L ++L + Q L A G+ +L
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYL 133
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDP 480
H+ +HR++ N+LL + K+ DFGL+K + G Y G F Y P
Sbjct: 134 HAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-P 189
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILS 506
E K + DV+SFG+ L ++L+
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A
Sbjct: 73 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAE 125
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 126 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 40/217 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL + +++ EL + NL+ Q +++ +D R
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLS-------------QVIQMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
T Y PE + D++S G ++ +++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 36/220 (16%)
Query: 320 IGEGITGKVYKGKL------SNNQHVAIKHITNEGN---VETFVREVASSSHVRHPNLVA 370
+GEG GKV K + VA+K + + + + E V HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWL-----------------------FGKDKCLSWI 407
L G C + LI E G+L +L ++ L+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 408 QRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSK-VIDIGETY 466
+ A ++G+ +L +E +VHRD+ NIL+ + K+SDFGLS+ V +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 467 ASSEVRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
S+ R ++ E + + DV+SFG++L +I++
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 23/199 (11%)
Query: 320 IGEGITG--KVYKGKLSNNQHVAIKHITNEGNVETFV-REVASSSHVRHPNLVALLGYCL 376
IG G G ++ + K SN + VA+K+I + V RE+ + +RHPN+V L
Sbjct: 27 IGSGNFGVARLMRDKQSN-ELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 377 RVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
++ E G L E + F +D+ + Q+L G+ + H+ +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCHAMQ---V 136
Query: 432 VHRDIKPTNILL--GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVN 489
HRD+K N LL P K+ DFG SK + + S V GT Y+ PE + +
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQPKSTV-GTPAYIAPEVLLKKEYD 194
Query: 490 SS-GDVYSFGIVLLQILSG 507
DV+S G+ L +L G
Sbjct: 195 GKVADVWSCGVTLYVMLVG 213
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 119
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q +++ +D R
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC-------------QVIQMELDHER 165
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 166 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 222
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 25/228 (10%)
Query: 292 VQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKV--YKGKLSNN---QHVAIKHITN 346
V + PG P T+ Y L ++ +GEG GKV Y +N+ + VA+K +
Sbjct: 17 VLFQGPGDP--TVFHKRY----LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA 70
Query: 347 EGNVET---FVREVASSSHVRHPNLVALLGYCLRVDECFL--IYELCPNGNLAEWLFGKD 401
+ + + +E+ + H +++ G C L + E P G+L ++L
Sbjct: 71 DAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PR 128
Query: 402 KCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVID 461
+ Q L A G+ +LH+ +HRD+ N+LL + K+ DFGL+K +
Sbjct: 129 HSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185
Query: 462 IG-ETYASSEVRGT--FGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
G E Y E + F Y PE K + DV+SFG+ L ++L+
Sbjct: 186 EGHEXYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 304 IREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREV 357
IR + E + + +IG G G+V + +Q V A+K + + F E
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEER 126
Query: 358 ASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLAEWLFGKDKCLSWIQ----RLE 411
+ P +V L +C D+ +++ E P G+L + D W + +
Sbjct: 127 DIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVV 184
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGL-SKVIDIGETYASSE 470
+A+D+ +HS ++HRD+KP N+LL + KL+DFG K+ + G + +
Sbjct: 185 LALDA------IHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA 235
Query: 471 VRGTFGYLDPE-YRSNCKVNSSG---DVYSFGIVLLQILSG 507
V GT Y+ PE +S G D +S G+ L ++L G
Sbjct: 236 V-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q +++ +D R
Sbjct: 83 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC-------------QVIQMELDHER 128
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 129 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 185
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q +++ +D R
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC-------------QVIQMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 80
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q +++ +D R
Sbjct: 81 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC-------------QVIQMELDHER 126
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 127 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 183
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 184 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 17/209 (8%)
Query: 312 EKLNELNLIGEGITGKVY---------KGKLSNNQHVAIKHITNEGNVETFVR-EVASSS 361
E L ++G G GKV+ GKL + + I + R E
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 362 HVRHPNLVALLGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL 420
H+R + L Y + + + LI + G L L +++ E+ I +
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH----EVQIYVGEIV 169
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
L + I++RDIK NILL N L+DFGLSK ET + + GT Y+ P
Sbjct: 170 LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 481 EY--RSNCKVNSSGDVYSFGIVLLQILSG 507
+ + + + D +S G+++ ++L+G
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 119
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q +++ +D R
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC-------------QVIQMELDHER 165
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 166 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 222
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q +++ +D R
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC-------------QVIQMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 74
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q +++ +D R
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC-------------QVIQMELDHER 120
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 121 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 177
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 109/269 (40%), Gaps = 38/269 (14%)
Query: 309 YATEKLNELNLIGEGITGKV---YKGKLSNNQH--VAIKHITNEG--NVETFVREVASSS 361
+ L ++ +G+G G V L +N VA+K + + G F RE+
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 79
Query: 362 HVRHPNLVALLG--YCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARG 419
+ +V G Y L+ E P+G L ++L QR +D++R
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL----------QRHRARLDASRL 129
Query: 420 LWFLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
L + +G VHRD+ NIL+ K++DFGL+K++ + + Y
Sbjct: 130 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP 189
Query: 473 GT---FGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS------GKKAKVLTRAGSALELA 523
G F Y PE S+ + DV+SFG+VL ++ + A+ L G ++
Sbjct: 190 GQSPIFWYA-PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDV- 247
Query: 524 DPKLDREYSIEAFDLTLQLALSCTALTHQ 552
P L R + L +C A H+
Sbjct: 248 -PALSRLLELLEEGQRLPAPPACPAEVHE 275
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q +++ +D R
Sbjct: 76 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC-------------QVIQMELDHER 121
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 122 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 178
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 28/200 (14%)
Query: 320 IGEGITGKVYKGKLSNNQHVAI------KHITNEGNVETFVREVASSSHVRHPNLVALLG 373
IG G VYKG L V + + + F E ++HPN+V
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 374 Y---CLRVDECF-LIYELCPNGNLAEWL----FGKDKCL-SWIQRLEIAIDSARGLWFLH 424
++ +C L+ EL +G L +L K K L SW +++ +GL FLH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLH 146
Query: 425 SYSEGCIVHRDIKPTNILL-GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYR 483
+ + I+HRD+K NI + GP K+ D GL+ + + V GT + PE
Sbjct: 147 TRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLAT---LKRASFAKAVIGTPEFXAPEXY 202
Query: 484 SNCKVNSSGDVYSFGIVLLQ 503
K + S DVY+FG L+
Sbjct: 203 EE-KYDESVDVYAFGXCXLE 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 40/217 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL + +++ EL + NL Q +++ +D R
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLC-------------QVIQMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
T Y PE + D++S G ++ +++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q +++ +D R
Sbjct: 76 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC-------------QVIQMELDHER 121
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 122 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 178
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 28/223 (12%)
Query: 304 IREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNV----ETF-VREVA 358
++++ E L +IG G G+V KL N V I N+ + ET RE
Sbjct: 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREER 125
Query: 359 SSSHVRHPNLVALLGYCLRVDE-CFLIYELCPNGNLAEWL------FGKDKCLSWIQRLE 411
+ L Y + D +L+ + G+L L ++ ++ +
Sbjct: 126 DVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMV 185
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLS-KVIDIGETYASSE 470
IAIDS L + VHRDIKP NIL+ N +L+DFG K+++ G T SS
Sbjct: 186 IAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG-TVQSSV 235
Query: 471 VRGTFGYLDPEYRS-----NCKVNSSGDVYSFGIVLLQILSGK 508
GT Y+ PE + D +S G+ + ++L G+
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLI 384
TGK+Y K + + + +K E + + S+ P +V + D+ I
Sbjct: 213 TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC--PFIVCMSYAFHTPDKLSFI 270
Query: 385 YELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLG 444
+L G+L + + S A + GL +H+ +V+RD+KP NILL
Sbjct: 271 LDLMNGGDL-HYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLD 326
Query: 445 PNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-YRSNCKVNSSGDVYSFGIVLLQ 503
+ ++SD GL+ + +AS GT GY+ PE + +SS D +S G +L +
Sbjct: 327 EHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 504 ILSG 507
+L G
Sbjct: 384 LLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLI 384
TGK+Y K + + + +K E + + S+ P +V + D+ I
Sbjct: 213 TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC--PFIVCMSYAFHTPDKLSFI 270
Query: 385 YELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLG 444
+L G+L + + S A + GL +H+ +V+RD+KP NILL
Sbjct: 271 LDLMNGGDL-HYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLD 326
Query: 445 PNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-YRSNCKVNSSGDVYSFGIVLLQ 503
+ ++SD GL+ + +AS GT GY+ PE + +SS D +S G +L +
Sbjct: 327 EHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 504 ILSG 507
+L G
Sbjct: 384 LLRG 387
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q +++ +D R
Sbjct: 83 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC-------------QVIQMELDHER 128
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 129 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 185
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLI 384
TGK+Y K + + + +K E + + S+ P +V + D+ I
Sbjct: 213 TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC--PFIVCMSYAFHTPDKLSFI 270
Query: 385 YELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLG 444
+L G+L + + S A + GL +H+ +V+RD+KP NILL
Sbjct: 271 LDLMNGGDL-HYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLD 326
Query: 445 PNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-YRSNCKVNSSGDVYSFGIVLLQ 503
+ ++SD GL+ + +AS GT GY+ PE + +SS D +S G +L +
Sbjct: 327 EHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 504 ILSG 507
+L G
Sbjct: 384 LLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 325 TGKVYKGKLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDECFLI 384
TGK+Y K + + + +K E + + S+ P +V + D+ I
Sbjct: 212 TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC--PFIVCMSYAFHTPDKLSFI 269
Query: 385 YELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLG 444
+L G+L + + S A + GL +H+ +V+RD+KP NILL
Sbjct: 270 LDLMNGGDL-HYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLD 325
Query: 445 PNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-YRSNCKVNSSGDVYSFGIVLLQ 503
+ ++SD GL+ + +AS GT GY+ PE + +SS D +S G +L +
Sbjct: 326 EHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 382
Query: 504 ILSG 507
+L G
Sbjct: 383 LLRG 386
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 300 PRYTIREVHYATEKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNE-----GNVETF 353
P+ T+ + Y L L+G+G GKV + + ++ A+K + E V
Sbjct: 5 PKVTMNDFDY-------LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT 57
Query: 354 VREVASSSHVRHPNLVALLGYCLRVDE--CFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
V E + RHP L AL Y + + CF++ NG + +++ + +
Sbjct: 58 VTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVME--YANGGELFFHLSRERVFTEERARF 114
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
+ L +LHS +V+RDIK N++L + K++DFGL K I +
Sbjct: 115 YGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXF 170
Query: 472 RGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
GT YL PE + + D + G+V+ +++ G+
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ D+GL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 40/217 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL + +++ EL + NL Q +++ +D R
Sbjct: 83 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLC-------------QVIQMELDHER 128
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 129 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 185
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
T Y PE + D++S G ++ +++ G
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 42/271 (15%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHVAIKHITNE----GNVETFVREVASSSHVRH--PNLVA 370
L IG G + KV++ Q AIK++ E ++++ E+A + ++ ++
Sbjct: 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 120
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLW-----FLHS 425
L Y + +++ E C N +L WL K W + W +H+
Sbjct: 121 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW---------ERKSYWKNMLEAVHT 170
Query: 426 YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEY- 482
+ IVH D+KP N L+ KL DFG++ + D S+V GT Y+ PE
Sbjct: 171 IHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAI 228
Query: 483 --RSNCKVNS--------SGDVYSFGIVLLQILSGKKA--KVLTRAGSALELADPKLDRE 530
S+ + N DV+S G +L + GK +++ + + DP + E
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 288
Query: 531 YSIEAFDLTLQLALSCTALTHQRPPMEQVFV 561
+ + + LQ L C +R P +++ +
Sbjct: 289 FP-DIPEKDLQDVLKCCL---KRDPKQRISI 315
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 80 NPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 132
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFG +K++ E Y + + +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQH-VAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V + H VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ DF L++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 318 NLIGEGITGKVYKGKLSNNQHVAIKHITNE------GNVETFVREVASSSHVRHPNLVAL 371
N IG G G+V K++ + I+ + +V+ F +E+ + HPN++ L
Sbjct: 15 NTIGRGSWGEV---KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 71
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
+ +L+ ELC G L E + K + I D + + H + +
Sbjct: 72 YETFEDNTDIYLVMELCTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKLN---V 127
Query: 432 VHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-----YR 483
HRD+KP N L P+ KL DFGL+ G+ + GT Y+ P+ Y
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQVLEGLYG 185
Query: 484 SNCKVNSSGDVYSFGIVLLQILSG 507
C D +S G+++ +L G
Sbjct: 186 PEC------DEWSAGVMMYVLLCG 203
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 318 NLIGEGITGKVYKGKLSNNQHVAIKHITNE------GNVETFVREVASSSHVRHPNLVAL 371
N IG G G+V K++ + I+ + +V+ F +E+ + HPN++ L
Sbjct: 32 NTIGRGSWGEV---KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 88
Query: 372 LGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
+ +L+ ELC G L E + K + I D + + H + +
Sbjct: 89 YETFEDNTDIYLVMELCTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKLN---V 144
Query: 432 VHRDIKPTNILL---GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE-----YR 483
HRD+KP N L P+ KL DFGL+ G+ + GT Y+ P+ Y
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQVLEGLYG 202
Query: 484 SNCKVNSSGDVYSFGIVLLQILSG 507
C D +S G+++ +L G
Sbjct: 203 PEC------DEWSAGVMMYVLLCG 220
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 40/217 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL + +++ EL + NL Q +++ +D R
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLC-------------QVIQMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
T Y PE + D++S G ++ +++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 43/216 (19%)
Query: 318 NLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETF---------VREVASSSHVRHPNL 368
+L+GEG G V + H I +E F +RE+ H +H N+
Sbjct: 17 SLLGEGAYGVV-----CSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 369 VALLGYCLRVD------ECFLIYELCP---NGNLAEWLFGKDKCLSWIQRLEIAIDSARG 419
+ + R D E ++I EL + ++ + D +I + + R
Sbjct: 72 ITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ------TLRA 124
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVID---------IGETYASSE 470
+ LH + ++HRD+KP+N+L+ N + K+ DFGL+++ID G+ E
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 471 VRGTFGYLDPEYR-SNCKVNSSGDVYSFGIVLLQIL 505
T Y PE ++ K + + DV+S G +L ++
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 312 EKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNEGNVETFVREVA----SSSHVRHP 366
+ L + +G G G V K + + + Q +A+K I N + R + S V P
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 367 NLVALLGYCLRVDECFLIYELCPNG--NLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH 424
V G R + ++ EL + + K + + +IA+ + L LH
Sbjct: 67 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 126
Query: 425 SYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSK--VIDIGETYASSEVRGTFGYLDPEY 482
S + ++HRD+KP+N+L+ + K+ DFG+S V D+ + + G Y+ PE
Sbjct: 127 S--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA----GCKPYMAPE- 179
Query: 483 RSNCKVNSSG-----DVYSFGIVLLQI 504
R N ++N G D++S GI ++++
Sbjct: 180 RINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 42/271 (15%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHVAIKHITNE----GNVETFVREVASSSHVRH--PNLVA 370
L IG G + KV++ Q AIK++ E ++++ E+A + ++ ++
Sbjct: 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 92
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLW-----FLHS 425
L Y + +++ E C N +L WL K W + W +H+
Sbjct: 93 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW---------ERKSYWKNMLEAVHT 142
Query: 426 YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEY- 482
+ IVH D+KP N L+ KL DFG++ + D S+V GT Y+ PE
Sbjct: 143 IHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAI 200
Query: 483 --RSNCKVNS--------SGDVYSFGIVLLQILSGKKA--KVLTRAGSALELADPKLDRE 530
S+ + N DV+S G +L + GK +++ + + DP + E
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 260
Query: 531 YSIEAFDLTLQLALSCTALTHQRPPMEQVFV 561
+ + + LQ L C +R P +++ +
Sbjct: 261 FP-DIPEKDLQDVLKCCL---KRDPKQRISI 287
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 78 NPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 130
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFG +K++ E Y + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 40/217 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL + +++ EL + NL Q +++ +D R
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLC-------------QVIQMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
T Y PE + D++S G ++ +++ G
Sbjct: 185 EVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 78 NPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 130
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFG +K++ E Y + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 42/271 (15%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHVAIKHITNE----GNVETFVREVASSSHVRH--PNLVA 370
L IG G + KV++ Q AIK++ E ++++ E+A + ++ ++
Sbjct: 17 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 76
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLW-----FLHS 425
L Y + +++ E C N +L WL K W + W +H+
Sbjct: 77 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW---------ERKSYWKNMLEAVHT 126
Query: 426 YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEY- 482
+ IVH D+KP N L+ KL DFG++ + D S+V GT Y+ PE
Sbjct: 127 IHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAI 184
Query: 483 --RSNCKVNS--------SGDVYSFGIVLLQILSGKKA--KVLTRAGSALELADPKLDRE 530
S+ + N DV+S G +L + GK +++ + + DP + E
Sbjct: 185 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 244
Query: 531 YSIEAFDLTLQLALSCTALTHQRPPMEQVFV 561
+ + + LQ L C +R P +++ +
Sbjct: 245 FP-DIPEKDLQDVLKCCL---KRDPKQRISI 271
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++ G G VYKG VAIK + T+ + + E + V
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 83 NPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 135
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 42/271 (15%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHVAIKHITNE----GNVETFVREVASSSHVRH--PNLVA 370
L IG G + KV++ Q AIK++ E ++++ E+A + ++ ++
Sbjct: 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 92
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLW-----FLHS 425
L Y + +++ E C N +L WL K W + W +H+
Sbjct: 93 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW---------ERKSYWKNMLEAVHT 142
Query: 426 YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEY- 482
+ IVH D+KP N L+ KL DFG++ + D S+V GT Y+ PE
Sbjct: 143 IHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQV-GTVNYMPPEAI 200
Query: 483 --RSNCKVNS--------SGDVYSFGIVLLQILSGKKA--KVLTRAGSALELADPKLDRE 530
S+ + N DV+S G +L + GK +++ + + DP + E
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 260
Query: 531 YSIEAFDLTLQLALSCTALTHQRPPMEQVFV 561
+ + + LQ L C +R P +++ +
Sbjct: 261 FP-DIPEKDLQDVLKCCL---KRDPKQRISI 287
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 42/271 (15%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHVAIKHITNE----GNVETFVREVASSSHVRH--PNLVA 370
L IG G + KV++ Q AIK++ E ++++ E+A + ++ ++
Sbjct: 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 73
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLW-----FLHS 425
L Y + +++ E C N +L WL K W + W +H+
Sbjct: 74 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW---------ERKSYWKNMLEAVHT 123
Query: 426 YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEY- 482
+ IVH D+KP N L+ KL DFG++ + D S+V GT Y+ PE
Sbjct: 124 IHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAI 181
Query: 483 --RSNCKVNS--------SGDVYSFGIVLLQILSGKKA--KVLTRAGSALELADPKLDRE 530
S+ + N DV+S G +L + GK +++ + + DP + E
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 241
Query: 531 YSIEAFDLTLQLALSCTALTHQRPPMEQVFV 561
+ + + LQ L C +R P +++ +
Sbjct: 242 FP-DIPEKDLQDVLKCCL---KRDPKQRISI 268
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 76 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFG +K++ E Y + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 33/228 (14%)
Query: 307 VHYATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHITN-EGNVETFVREV---ASSS 361
+ YA++ E+ ++G+G G+V K + + ++++ AIK I + E + T + EV AS +
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 362 H---VRH-------PNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H VR+ N V + + F+ E C N L + + ++ +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI----DI----- 462
+ L ++HS I+HRD+KP NI + + K+ DFGL+K + DI
Sbjct: 121 LFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 463 ----GETYASSEVRGTFGYLDPEYRSNC-KVNSSGDVYSFGIVLLQIL 505
G + + GT Y+ E N D+YS GI+ +++
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 42/271 (15%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHVAIKHITNE----GNVETFVREVASSSHVRH--PNLVA 370
L IG G + KV++ Q AIK++ E ++++ E+A + ++ ++
Sbjct: 13 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 72
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLW-----FLHS 425
L Y + +++ E C N +L WL K W + W +H+
Sbjct: 73 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW---------ERKSYWKNMLEAVHT 122
Query: 426 YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEY- 482
+ IVH D+KP N L+ KL DFG++ + D S+V GT Y+ PE
Sbjct: 123 IHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAI 180
Query: 483 --RSNCKVNS--------SGDVYSFGIVLLQILSGKKA--KVLTRAGSALELADPKLDRE 530
S+ + N DV+S G +L + GK +++ + + DP + E
Sbjct: 181 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 240
Query: 531 YSIEAFDLTLQLALSCTALTHQRPPMEQVFV 561
+ + + LQ L C +R P +++ +
Sbjct: 241 FP-DIPEKDLQDVLKCCL---KRDPKQRISI 267
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 318 NLIGEGITGKVYKGKLSNNQHV-AIKHITNEG---NVETFVREVASSSHVRHPNLVALLG 373
+++G+G T V++G+ + AIK N V+ +RE + H N+V L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 374 YC--LRVDECFLIYELCPNGNLAEWLFGKDKC--LSWIQRLEIAIDSARGLWFLHSYSEG 429
LI E CP G+L L L + L + D G+ L E
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---REN 131
Query: 430 CIVHRDIKPTNIL--LGPNFEA--KLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSN 485
IVHR+IKP NI+ +G + ++ KL+DFG ++ ++ E + S + GT YL P+
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMYER 189
Query: 486 C--------KVNSSGDVYSFGIVLLQILSG 507
K ++ D++S G+ +G
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 309 YATEKLNELNLIGEGITGKV---YKGKLSNNQH--VAIKHITNEG--NVETFVREVASSS 361
+ L ++ +G+G G V L +N VA+K + + G F RE+
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 362 HVRHPNLVALLG--YCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARG 419
+ +V G Y L+ E P+G L ++L QR +D++R
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL----------QRHRARLDASRL 117
Query: 420 LWFLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
L + +G VHRD+ NIL+ K++DFGL+K++ + + Y
Sbjct: 118 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP 177
Query: 473 GT---FGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
G F Y PE S+ + DV+SFG+VL ++ +
Sbjct: 178 GQSPIFWYA-PESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 32/266 (12%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHVAIKHITNE----GNVETFVREVASSSHVRH--PNLVA 370
L IG G + KV++ Q AIK++ E ++++ E+A + ++ ++
Sbjct: 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 120
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
L Y + +++ E C N +L WL K W ++ L +H+ +
Sbjct: 121 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK----NMLEAVHTIHQHG 175
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEY---RSN 485
IVH D+KP N L+ KL DFG++ + D S+V GT Y+ PE S+
Sbjct: 176 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAIKDMSS 233
Query: 486 CKVNS--------SGDVYSFGIVLLQILSGKKA--KVLTRAGSALELADPKLDREYSIEA 535
+ N DV+S G +L + GK +++ + + DP + E+ +
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-DI 292
Query: 536 FDLTLQLALSCTALTHQRPPMEQVFV 561
+ LQ L C +R P +++ +
Sbjct: 293 PEKDLQDVLKCCL---KRDPKQRISI 315
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 314 LNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNE-----GNVETFVREVASSSHVRHPN 367
+ L L+G+G GKV + + ++ A+K + E V V E + RHP
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 368 LVALLGYCLRVDE--CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHS 425
L AL Y + + CF++ NG + +++ + + + L +LHS
Sbjct: 67 LTAL-KYAFQTHDRLCFVME--YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 426 YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSN 485
+V+RDIK N++L + K++DFGL K I + GT YL PE +
Sbjct: 124 RD---VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXFCGTPEYLAPEVLED 179
Query: 486 CKVNSSGDVYSFGIVLLQILSGK 508
+ D + G+V+ +++ G+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 317 LNLIGEGITGKVYKGK-LSNNQHVAIKHITNE-----GNVETFVREVASSSHVRHPNLVA 370
L L+G+G GKV + + ++ A+K + E V V E + RHP L A
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 371 LLGYCLRVDE--CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
L Y + + CF++ NG + +++ + + + L +LHS
Sbjct: 70 L-KYAFQTHDRLCFVME--YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD- 125
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKV 488
+V+RDIK N++L + K++DFGL K I + GT YL PE +
Sbjct: 126 --VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 489 NSSGDVYSFGIVLLQILSGK 508
+ D + G+V+ +++ G+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 314 LNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNE-----GNVETFVREVASSSHVRHPN 367
+ L L+G+G GKV + + ++ A+K + E V V E + RHP
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 368 LVALLGYCLRVDE--CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHS 425
L AL Y + + CF++ NG + +++ + + + L +LHS
Sbjct: 70 LTAL-KYAFQTHDRLCFVME--YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 126
Query: 426 YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSN 485
+V+RDIK N++L + K++DFGL K I + GT YL PE +
Sbjct: 127 RD---VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKTFCGTPEYLAPEVLED 182
Query: 486 CKVNSSGDVYSFGIVLLQILSGK 508
+ D + G+V+ +++ G+
Sbjct: 183 NDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 83 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 135
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFG +K++ E Y + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++ G G VYKG VAIK + T+ + + E + V
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 76 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 128
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++G G G VYKG VAIK + T+ + + E + V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 78 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 130
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFG +K++ E Y + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 77/188 (40%), Gaps = 26/188 (13%)
Query: 291 GVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITN---E 347
+Q K R I E+H I G G V G S VAIK + N +
Sbjct: 1 SMQAKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSD 60
Query: 348 GNV----------ETFVREVASSSHVRHPNLVALLGYCLRVDE-----CFLIYELCPNGN 392
G + +RE+ +H HPN++ L + +E +L+ EL +
Sbjct: 61 GRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTD 119
Query: 393 LAEWLFGKDKCLS--WIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAK 450
LA+ + + +S IQ I L LH E +VHRD+ P NILL N +
Sbjct: 120 LAQVIHDQRIVISPQHIQYFMYHI-----LLGLHVLHEAGVVHRDLHPGNILLADNNDIT 174
Query: 451 LSDFGLSK 458
+ DF L++
Sbjct: 175 ICDFNLAR 182
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 314 LNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNE-----GNVETFVREVASSSHVRHPN 367
+ L L+G+G GKV + + ++ A+K + E V V E + RHP
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 368 LVALLGYCLRVDE--CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHS 425
L AL Y + + CF++ NG + +++ + + + L +LHS
Sbjct: 67 LTAL-KYAFQTHDRLCFVME--YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 426 YSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSN 485
+V+RDIK N++L + K++DFGL K I + GT YL PE +
Sbjct: 124 RD---VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKTFCGTPEYLAPEVLED 179
Query: 486 CKVNSSGDVYSFGIVLLQILSGK 508
+ D + G+V+ +++ G+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 317 LNLIGEGITGKVYKGK-LSNNQHVAIKHITNE-----GNVETFVREVASSSHVRHPNLVA 370
L L+G+G GKV + + ++ A+K + E V V E + RHP L A
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 371 LLGYCLRVDE--CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
L Y + + CF++ NG + +++ + + + L +LHS
Sbjct: 70 L-KYAFQTHDRLCFVME--YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD- 125
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKV 488
+V+RDIK N++L + K++DFGL K I + GT YL PE +
Sbjct: 126 --VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 489 NSSGDVYSFGIVLLQILSGK 508
+ D + G+V+ +++ G+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGR 202
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 313 KLNELNLIGEGITGKVYKGKLSNNQH-----VAIKHI---TNEGNVETFVREVASSSHVR 364
+ ++ ++ G G VYKG VAIK + T+ + + E + V
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSAR 418
+P++ LLG CL LI +L P G L +++ G L+W + A+
Sbjct: 83 NPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 135
Query: 419 GLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFGY 477
G+ +L +VHRD+ N+L+ K++DFGL+K++ E Y + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 478 LDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
+ E + DV+S+G+ + ++++
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 317 LNLIGEGITGKVYKGK-LSNNQHVAIKHITNE-----GNVETFVREVASSSHVRHPNLVA 370
L L+G+G GKV + + ++ A+K + E V V E + RHP L A
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 371 LLGYCLRVDE--CFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
L Y + + CF++ NG + +++ + + + L +LHS
Sbjct: 70 L-KYAFQTHDRLCFVME--YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD- 125
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKV 488
+V+RDIK N++L + K++DFGL K I + GT YL PE +
Sbjct: 126 --VVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 489 NSSGDVYSFGIVLLQILSGK 508
+ D + G+V+ +++ G+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGR 202
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 40/217 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 83
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL + +++ EL + NL Q +++ +D R
Sbjct: 84 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLC-------------QVIQMELDHER 129
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++
Sbjct: 130 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVP 186
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
T Y PE + D++S G ++ +++ G
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQ 408
+ E RE + ++HP++V LL ++++E ++ G D C ++
Sbjct: 69 STEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFE---------FMDGADLCFEIVK 119
Query: 409 RLE--------IAIDSARGLWFLHSY-SEGCIVHRDIKPTNILLGP---NFEAKLSDFGL 456
R + +A R + Y + I+HRD+KP N+LL + KL DFG+
Sbjct: 120 RADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGV 179
Query: 457 SKVIDIGETYASSEVR-GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ I +GE+ + R GT ++ PE DV+ G++L +LSG
Sbjct: 180 A--IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 22/207 (10%)
Query: 314 LNELNLIGEGITGKVY-KGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPN 367
N L ++G+G GKV + ++ A+K + + +VE + E + P
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 368 LVALLGYCLR-VDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLW 421
+ L C + +D + + E G+L + F + + + EIAI GL+
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAA--EIAI----GLF 135
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE 481
FL S I++RD+K N++L K++DFG+ K +I + + GT Y+ PE
Sbjct: 136 FLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPE 191
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSGK 508
+ S D ++FG++L ++L+G+
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 22/207 (10%)
Query: 314 LNELNLIGEGITGKVY-KGKLSNNQHVAIK-----HITNEGNVETFVREVASSSHVRHPN 367
N L ++G+G GKV + ++ A+K + + +VE + E + P
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 368 LVALLGYCLR-VDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLW 421
+ L C + +D + + E G+L + F + + + EIAI GL+
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAA--EIAI----GLF 456
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE 481
FL S I++RD+K N++L K++DFG+ K +I + + GT Y+ PE
Sbjct: 457 FLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPE 512
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSGK 508
+ S D ++FG++L ++L+G+
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 37/176 (21%)
Query: 365 HPNLVALLGYCLRVDECFLI--YELCPNGNLAEWLFGKD------KCLSWIQRLEIAIDS 416
HPN++ YC + FL ELC N NL + + K+ K + +
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILL-------------GPNFEAKLSDFGLSKVIDIG 463
A G+ LHS I+HRD+KP NIL+ N +SDFGL K +D G
Sbjct: 125 ASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 464 ETYASSEVR---GTFGYLDPE-------YRSNCKVNSSGDVYSFGIVLLQILSGKK 509
++ + + GT G+ PE ++ ++ S D++S G V ILS K
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 309 YATEKLNELNLIGEGITGKV---YKGKLSNNQH--VAIKHITNEG--NVETFVREVASSS 361
+ L ++ +G+G G V L +N VA+K + + G F RE+
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 362 HVRHPNLVALLG--YCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARG 419
+ +V G Y E L+ E P+G L ++L QR +D++R
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL----------QRHRARLDASRL 113
Query: 420 LWFLHSYSEGC-------IVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
L + +G VHRD+ NIL+ K++DFGL+K++ + +
Sbjct: 114 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREP 173
Query: 473 G--TFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
G + PE S+ + DV+SFG+VL ++ +
Sbjct: 174 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 32/209 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVR-EVASSSHVRHPNLVALLGYCLRV 378
IG+G G+V++GK + VA+K ++ F E+ + +RH N++ + +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 75
Query: 379 D----ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH-----SYSEG 429
+ + +L+ + +G+L ++L + + +++A+ +A GL LH + +
Sbjct: 76 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKP 133
Query: 430 CIVHRDIKPTNILLGPNFEAKLSDFGL-------SKVIDIGETYASSEVRGTFGYLDPEY 482
I HRD+K NIL+ N ++D GL + IDI A + GT Y+ PE
Sbjct: 134 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI----APNHRVGTKRYMAPEV 189
Query: 483 RSNCKVN-------SSGDVYSFGIVLLQI 504
+ +N D+Y+ G+V +I
Sbjct: 190 LDDS-INMKHFESFKRADIYAMGLVFWEI 217
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 365 HPNLVALLGYCL--RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR---G 419
H + L Y + D C L+ + G++ ++ D+ Q +A+ G
Sbjct: 243 HSRFIVSLAYAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
L LH + I++RD+KP N+LL + ++SD GL+ + G+T + GT G++
Sbjct: 302 LEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTPGFMA 357
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
PE + + S D ++ G+ L ++++ +
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 32/209 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVR-EVASSSHVRHPNLVALLGYCLRV 378
IG+G G+V++GK + VA+K ++ F E+ + +RH N++ + +
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 95
Query: 379 D----ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH-----SYSEG 429
+ + +L+ + +G+L ++L + + +++A+ +A GL LH + +
Sbjct: 96 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKP 153
Query: 430 CIVHRDIKPTNILLGPNFEAKLSDFGL-------SKVIDIGETYASSEVRGTFGYLDPEY 482
I HRD+K NIL+ N ++D GL + IDI A + GT Y+ PE
Sbjct: 154 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI----APNHRVGTKRYMAPEV 209
Query: 483 RSNCKVN-------SSGDVYSFGIVLLQI 504
+ +N D+Y+ G+V +I
Sbjct: 210 LDDS-INMKHFESFKRADIYAMGLVFWEI 237
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 33/172 (19%)
Query: 365 HPNLVALLGYCLRVDECFLI--YELCPNGNLAEWLFGKD------KCLSWIQRLEIAIDS 416
HPN++ YC + FL ELC N NL + + K+ K + +
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILL-------------GPNFEAKLSDFGLSKVIDIG 463
A G+ LHS I+HRD+KP NIL+ N +SDFGL K +D G
Sbjct: 143 ASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 464 ETYASSEVR---GTFGYLDPEY---RSNCKVNSSGDVYSFGIVLLQILSGKK 509
+ + GT G+ PE + ++ S D++S G V ILS K
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 32/209 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVR-EVASSSHVRHPNLVALLGYCLRV 378
IG+G G+V++GK + VA+K ++ F E+ + +RH N++ + +
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 108
Query: 379 D----ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH-----SYSEG 429
+ + +L+ + +G+L ++L + + +++A+ +A GL LH + +
Sbjct: 109 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKP 166
Query: 430 CIVHRDIKPTNILLGPNFEAKLSDFGL-------SKVIDIGETYASSEVRGTFGYLDPEY 482
I HRD+K NIL+ N ++D GL + IDI A + GT Y+ PE
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI----APNHRVGTKRYMAPEV 222
Query: 483 RSNCKVN-------SSGDVYSFGIVLLQI 504
+ +N D+Y+ G+V +I
Sbjct: 223 LDDS-INMKHFESFKRADIYAMGLVFWEI 250
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 33/172 (19%)
Query: 365 HPNLVALLGYCLRVDECFLI--YELCPNGNLAEWLFGKD------KCLSWIQRLEIAIDS 416
HPN++ YC + FL ELC N NL + + K+ K + +
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILL-------------GPNFEAKLSDFGLSKVIDIG 463
A G+ LHS I+HRD+KP NIL+ N +SDFGL K +D G
Sbjct: 143 ASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 464 ETYASSEVR---GTFGYLDPEY---RSNCKVNSSGDVYSFGIVLLQILSGKK 509
+ + GT G+ PE + ++ S D++S G V ILS K
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 32/209 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVR-EVASSSHVRHPNLVALLGYCLRV 378
IG+G G+V++GK + VA+K ++ F E+ + +RH N++ + +
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 69
Query: 379 D----ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH-----SYSEG 429
+ + +L+ + +G+L ++L + + +++A+ +A GL LH + +
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKP 127
Query: 430 CIVHRDIKPTNILLGPNFEAKLSDFGL-------SKVIDIGETYASSEVRGTFGYLDPEY 482
I HRD+K NIL+ N ++D GL + IDI A + GT Y+ PE
Sbjct: 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI----APNHRVGTKRYMAPEV 183
Query: 483 RSNCKVN-------SSGDVYSFGIVLLQI 504
+ +N D+Y+ G+V +I
Sbjct: 184 LDDS-INMKHFESFKRADIYAMGLVFWEI 211
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 365 HPNLVALLGYCL--RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR---G 419
H + L Y + D C L+ + G++ ++ D+ Q +A+ G
Sbjct: 243 HSRFIVSLAYAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
L LH + I++RD+KP N+LL + ++SD GL+ + G+T + GT G++
Sbjct: 302 LEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTPGFMA 357
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
PE + + S D ++ G+ L ++++ +
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 32/209 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVR-EVASSSHVRHPNLVALLGYCLRV 378
IG+G G+V++GK + VA+K ++ F E+ + +RH N++ + +
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 70
Query: 379 D----ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH-----SYSEG 429
+ + +L+ + +G+L ++L + + +++A+ +A GL LH + +
Sbjct: 71 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKP 128
Query: 430 CIVHRDIKPTNILLGPNFEAKLSDFGL-------SKVIDIGETYASSEVRGTFGYLDPEY 482
I HRD+K NIL+ N ++D GL + IDI A + GT Y+ PE
Sbjct: 129 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI----APNHRVGTKRYMAPEV 184
Query: 483 RSNCKVN-------SSGDVYSFGIVLLQI 504
+ +N D+Y+ G+V +I
Sbjct: 185 LDDS-INMKHFESFKRADIYAMGLVFWEI 212
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 23/199 (11%)
Query: 320 IGEGITG--KVYKGKLSNNQHVAIKHITNEGNVETFV-REVASSSHVRHPNLVALLGYCL 376
IG G G ++ + K SN + VA+K+I ++ V RE+ + +RHPN+V L
Sbjct: 27 IGSGNFGVARLMRDKQSN-ELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 377 RVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
++ E G L E + F +D+ + Q+L G+ + H+ +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCHAMQ---V 136
Query: 432 VHRDIKPTNILL--GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVN 489
HRD+K N LL P K+ FG SK + + S V GT Y+ PE + +
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQPKSTV-GTPAYIAPEVLLKKEYD 194
Query: 490 SS-GDVYSFGIVLLQILSG 507
DV+S G+ L +L G
Sbjct: 195 GKVADVWSCGVTLYVMLVG 213
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ FGL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 365 HPNLVALLGYCL--RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR---G 419
H + L Y + D C L+ + G++ ++ D+ Q +A+ G
Sbjct: 243 HSRFIVSLAYAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
L LH + I++RD+KP N+LL + ++SD GL+ + G+T + GT G++
Sbjct: 302 LEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTPGFMA 357
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
PE + + S D ++ G+ L ++++ +
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 32/209 (15%)
Query: 320 IGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVR-EVASSSHVRHPNLVALLGYCLRV 378
IG+G G+V++GK + VA+K ++ F E+ + +RH N++ + +
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 72
Query: 379 D----ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH-----SYSEG 429
+ + +L+ + +G+L ++L + + +++A+ +A GL LH + +
Sbjct: 73 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKP 130
Query: 430 CIVHRDIKPTNILLGPNFEAKLSDFGL-------SKVIDIGETYASSEVRGTFGYLDPEY 482
I HRD+K NIL+ N ++D GL + IDI A + GT Y+ PE
Sbjct: 131 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI----APNHRVGTKRYMAPEV 186
Query: 483 RSNCKVN-------SSGDVYSFGIVLLQI 504
+ +N D+Y+ G+V +I
Sbjct: 187 LDDS-INMKHFESFKRADIYAMGLVFWEI 214
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 365 HPNLVALLGYCL--RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR---G 419
H + L Y + D C L+ + G++ ++ D+ Q +A+ G
Sbjct: 243 HSRFIVSLAYAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
L LH + I++RD+KP N+LL + ++SD GL+ + G+T + GT G++
Sbjct: 302 LEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTPGFMA 357
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
PE + + S D ++ G+ L ++++ +
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 33/230 (14%)
Query: 298 GCPRYTIREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVR-E 356
G P R V ++ L +G+G G+V++G ++VA+K ++ F E
Sbjct: 26 GLPFLVQRTV---ARQITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETE 81
Query: 357 VASSSHVRHPNLVALLGYCL----RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEI 412
+ ++ +RH N++ + + + +LI G+L ++L + L + L I
Sbjct: 82 LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRI 139
Query: 413 AIDSARGLWFLH-----SYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKV-------I 460
+ A GL LH + + I HRD+K NIL+ N + ++D GL+ + +
Sbjct: 140 VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL 199
Query: 461 DIGETYASSEVRGTFGYLDPE-YRSNCKVN-----SSGDVYSFGIVLLQI 504
D+G ++ GT Y+ PE +V+ D+++FG+VL ++
Sbjct: 200 DVG----NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ D GL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTF 475
ARG+ FL S CI HRD+ NILL N K+ DFGL++ I Y + R
Sbjct: 209 ARGMEFLSSRK--CI-HRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPL 265
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE + ++ DV+S+G++L +I S
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ D GL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHV-AIKHITNE-GNVETFVREVASSSHV-----RHPNLV 369
L +IG G KV +L + A+K + E N + + V + HV HP LV
Sbjct: 25 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 84
Query: 370 ALLGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
L C + + F + E G+L + + K R A + + L +LH E
Sbjct: 85 GLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLH---E 139
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKV-IDIGETYASSEVRGTFGYLDPEYRSNCK 487
I++RD+K N+LL KL+D+G+ K + G+T +S GT Y+ PE
Sbjct: 140 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEILRGED 197
Query: 488 VNSSGDVYSFGIVLLQILSGK 508
S D ++ G+++ ++++G+
Sbjct: 198 YGFSVDWWALGVLMFEMMAGR 218
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 32/266 (12%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHVAIKHITNE----GNVETFVREVASSSHVRH--PNLVA 370
L IG G + KV++ Q AIK++ E ++++ E+A + ++ ++
Sbjct: 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 120
Query: 371 LLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
L Y + +++ E C N +L WL K W ++ L +H+ +
Sbjct: 121 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWK----NMLEAVHTIHQHG 175
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKVI--DIGETYASSEVRGTFGYLDPEY---RSN 485
IVH D+KP N L+ KL DFG++ + D S+V G Y+ PE S+
Sbjct: 176 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GAVNYMPPEAIKDMSS 233
Query: 486 CKVNS--------SGDVYSFGIVLLQILSGKKA--KVLTRAGSALELADPKLDREYSIEA 535
+ N DV+S G +L + GK +++ + + DP + E+ +
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP-DI 292
Query: 536 FDLTLQLALSCTALTHQRPPMEQVFV 561
+ LQ L C +R P +++ +
Sbjct: 293 PEKDLQDVLKCCL---KRDPKQRISI 315
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL + +++ EL + NL Q +++ +D R
Sbjct: 76 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLC-------------QVIQMELDHER 121
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 122 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 178
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 75/176 (42%), Gaps = 37/176 (21%)
Query: 365 HPNLVALLGYCLRVDECFLI--YELCPNGNLAEWLFGKD------KCLSWIQRLEIAIDS 416
HPN++ YC + FL ELC N NL + + K+ K + +
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILL-------------GPNFEAKLSDFGLSKVIDIG 463
A G+ LHS I+HRD+KP NIL+ N +SDFGL K +D G
Sbjct: 125 ASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 464 ETYASSEVR---GTFGYLDPE-------YRSNCKVNSSGDVYSFGIVLLQILSGKK 509
+ + GT G+ PE ++ ++ S D++S G V ILS K
Sbjct: 182 QXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 31/221 (14%)
Query: 303 TIREVHYATEKLNELNLIGEGITGKVYKG-KLSNNQHVAIKHITNEG----NVETFVREV 357
TI EV E+ L+ +G G G V VA+K ++ + + RE+
Sbjct: 16 TIWEV---PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 358 ASSSHVRHPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H++H N++ LL ++ +L+ L +L + + +Q L
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI 131
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEV 471
I RGL ++HS I+HRD+KP+N+ + + E K+ D GL++ D E+
Sbjct: 132 YQI--LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTD-------DEM 179
Query: 472 RG---TFGYLDPEYRSN-CKVNSSGDVYSFGIVLLQILSGK 508
G T Y PE N N + D++S G ++ ++L+G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 86
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL + +++ EL + NL Q +++ +D R
Sbjct: 87 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLC-------------QVIQMELDHER 132
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++ +
Sbjct: 133 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTP 189
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHV-AIKHITNE-GNVETFVREVASSSHV-----RHPNLV 369
L +IG G KV +L + A+K + E N + + V + HV HP LV
Sbjct: 10 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 69
Query: 370 ALLGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
L C + + F + E G+L + + K R A + + L +LH E
Sbjct: 70 GLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLH---E 124
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKV-IDIGETYASSEVRGTFGYLDPEYRSNCK 487
I++RD+K N+LL KL+D+G+ K + G+T +S GT Y+ PE
Sbjct: 125 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEILRGED 182
Query: 488 VNSSGDVYSFGIVLLQILSGK 508
S D ++ G+++ ++++G+
Sbjct: 183 YGFSVDWWALGVLMFEMMAGR 203
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 318 NLIGEGITGKVYKGKLSNNQHV-AIKHITNEG---NVETFVREVASSSHVRHPNLVALLG 373
+++G+G T V++G+ + AIK N V+ +RE + H N+V L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 374 YC--LRVDECFLIYELCPNGNLAEWLFGKDKC--LSWIQRLEIAIDSARGLWFLHSYSEG 429
LI E CP G+L L L + L + D G+ L E
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---EN 131
Query: 430 CIVHRDIKPTNIL--LGPNFEA--KLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSN 485
IVHR+IKP NI+ +G + ++ KL+DFG ++ ++ E + + GT YL P+
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGTEEYLHPDMYER 189
Query: 486 C--------KVNSSGDVYSFGIVLLQILSG 507
K ++ D++S G+ +G
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVR-EVASSSHVRHPNLVALLGYC 375
L +G+G G+V++G ++VA+K ++ F E+ ++ +RH N++ +
Sbjct: 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 376 L----RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH-----SY 426
+ + +LI G+L ++L + L + L I + A GL LH +
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 427 SEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKV-------IDIGETYASSEVRGTFGYLD 479
+ I HRD+K NIL+ N + ++D GL+ + +D+G ++ GT Y+
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG----NNPRVGTKRYMA 185
Query: 480 PEY-----RSNC-KVNSSGDVYSFGIVLLQI 504
PE + +C D+++FG+VL ++
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHV-AIKHITNE-GNVETFVREVASSSHV-----R 364
+ + L +IG G KV +L + A+K + E N + + V + HV
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 365 HPNLVALLGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFL 423
HP LV L C + + F + E G+L + + K R A + + L +L
Sbjct: 69 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYL 126
Query: 424 HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKV-IDIGETYASSEVRGTFGYLDPEY 482
H E I++RD+K N+LL KL+D+G+ K + G+T +S GT Y+ PE
Sbjct: 127 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEI 181
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSGK 508
S D ++ G+++ ++++G+
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHVAIKHITNEGNVETFVR-EVASSSHVRHPNLVALLGYC 375
L +G+G G+V++G ++VA+K ++ F E+ ++ +RH N++ +
Sbjct: 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 376 L----RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH-----SY 426
+ + +LI G+L ++L + L + L I + A GL LH +
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 427 SEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKV-------IDIGETYASSEVRGTFGYLD 479
+ I HRD+K NIL+ N + ++D GL+ + +D+G ++ GT Y+
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG----NNPRVGTKRYMA 185
Query: 480 PEY-----RSNC-KVNSSGDVYSFGIVLLQI 504
PE + +C D+++FG+VL ++
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 25/219 (11%)
Query: 304 IREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREV 357
IR++ E + +IG G G+V + + + V A+K + + F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 358 ASSSHVRHPNLVALLGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQ----RLEI 412
+ P +V L Y + D +++ E P G+L + D W + + +
Sbjct: 126 DIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL 184
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
A+D+ + F +HRD+KP N+LL + KL+DFG ++
Sbjct: 185 ALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 473 GTFGYLDPE-YRSNCKVNSSG---DVYSFGIVLLQILSG 507
GT Y+ PE +S G D +S G+ L ++L G
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL + +++ EL + NL Q +++ +D R
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLC-------------QVIQMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++
Sbjct: 128 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 185 EVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 23/199 (11%)
Query: 320 IGEGITG--KVYKGKLSNNQHVAIKHITNEGNVETFV-REVASSSHVRHPNLVALLGYCL 376
IG G G ++ + K SN + VA+K+I ++ V RE+ + +RHPN+V L
Sbjct: 27 IGSGNFGVARLMRDKQSN-ELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 377 RVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
++ E G L E + F +D+ + Q+L G+ + H+ +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCHAMQ---V 136
Query: 432 VHRDIKPTNILL--GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVN 489
HRD+K N LL P K+ FG SK + + GT Y+ PE + +
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ--PKDTVGTPAYIAPEVLLKKEYD 194
Query: 490 SS-GDVYSFGIVLLQILSG 507
DV+S G+ L +L G
Sbjct: 195 GKVADVWSCGVTLYVMLVG 213
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 25/219 (11%)
Query: 304 IREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREV 357
IR++ E + +IG G G+V + + + V A+K + + F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 358 ASSSHVRHPNLVALLGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQ----RLEI 412
+ P +V L Y + D +++ E P G+L + D W + + +
Sbjct: 126 DIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL 184
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
A+D+ + F +HRD+KP N+LL + KL+DFG ++
Sbjct: 185 ALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 473 GTFGYLDPE-YRSNCKVNSSG---DVYSFGIVLLQILSG 507
GT Y+ PE +S G D +S G+ L ++L G
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 25/219 (11%)
Query: 304 IREVHYATEKLNELNLIGEGITGKVYKGKLSNNQHV-AIK-----HITNEGNVETFVREV 357
IR++ E + +IG G G+V + + + V A+K + + F E
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 358 ASSSHVRHPNLVALLGYCLRVDE-CFLIYELCPNGNLAEWLFGKDKCLSWIQ----RLEI 412
+ P +V L Y + D +++ E P G+L + D W + + +
Sbjct: 121 DIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL 179
Query: 413 AIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVR 472
A+D+ + F +HRD+KP N+LL + KL+DFG ++
Sbjct: 180 ALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 230
Query: 473 GTFGYLDPE-YRSNCKVNSSG---DVYSFGIVLLQILSG 507
GT Y+ PE +S G D +S G+ L ++L G
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 16/136 (11%)
Query: 380 ECFLIYELCPNGNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHR 434
+C LI C +G LF + D+ + + EI + +LHS + I HR
Sbjct: 86 KCLLIVMECLDGGE---LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 139
Query: 435 DIKPTNILLG---PNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSS 491
D+KP N+L PN KL+DFG +K + + +E T Y+ PE K + S
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKS 197
Query: 492 GDVYSFGIVLLQILSG 507
D++S G+++ +L G
Sbjct: 198 CDMWSLGVIMYILLCG 213
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 112/243 (46%), Gaps = 34/243 (13%)
Query: 320 IGEGITGKVYK-GKLSNNQHVAIKHITNEGNVETFVR-EVASSSHVRHPNLVALLGYCLR 377
+G G G V++ + S+ + K + +G + V+ E++ + RH N++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 378 VDECFLIYELCPNGNLAEWL------FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCI 431
++E +I+E ++ E + + + +S++ ++ L FLHS++ G
Sbjct: 73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQV------CEALQFLHSHNIG-- 124
Query: 432 VHRDIKPTNILLGPNFEA--KLSDFGLSKVIDIGETYASSEVRGTFG---YLDPEYRSNC 486
H DI+P NI+ + K+ +FG ++ + G+ + R F Y PE +
Sbjct: 125 -HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF-----RLLFTAPEYYAPEVHQHD 178
Query: 487 KVNSSGDVYSFGIVLLQILSG-------KKAKVLTRAGSALELADPKLDREYSIEAFDLT 539
V+++ D++S G ++ +LSG +++ +A D + +E SIEA D
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFV 238
Query: 540 LQL 542
+L
Sbjct: 239 DRL 241
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHV-AIKHITNE-GNVETFVREVASSSHV-----RHPNLV 369
L +IG G KV +L + A++ + E N + + V + HV HP LV
Sbjct: 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 116
Query: 370 ALLGYCLRVD-ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSE 428
L C + + F + E G+L + + K R A + + L +LH E
Sbjct: 117 GLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLH---E 171
Query: 429 GCIVHRDIKPTNILLGPNFEAKLSDFGLSKV-IDIGETYASSEVRGTFGYLDPEYRSNCK 487
I++RD+K N+LL KL+D+G+ K + G+T +S GT Y+ PE
Sbjct: 172 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPEILRGED 229
Query: 488 VNSSGDVYSFGIVLLQILSGK 508
S D ++ G+++ ++++G+
Sbjct: 230 YGFSVDWWALGVLMFEMMAGR 250
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 380 ECFLIYELCPNGNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHR 434
+C LI C +G LF + D+ + + EI + +LHS + I HR
Sbjct: 132 KCLLIVMECLDGGE---LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 185
Query: 435 DIKPTNILLG---PNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKV 488
D+KP N+L PN KL+DFG +K ET + + + T Y+ PE K
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKY 240
Query: 489 NSSGDVYSFGIVLLQILSG 507
+ S D++S G+++ +L G
Sbjct: 241 DKSCDMWSLGVIMYILLCG 259
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 40/218 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ L IG G G V Y L N VAIK ++ N+ + + RE+ V
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N++ LL + +++ EL + NL Q +++ +D R
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLC-------------QVIQMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ G ++
Sbjct: 128 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + D++S G ++ +++ K
Sbjct: 185 EVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 380 ECFLIYELCPNGNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHR 434
+C LI C +G LF + D+ + + EI + +LHS + I HR
Sbjct: 94 KCLLIVMECLDGGE---LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 147
Query: 435 DIKPTNILLG---PNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKV 488
D+KP N+L PN KL+DFG +K ET + + + T Y+ PE K
Sbjct: 148 DVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKY 202
Query: 489 NSSGDVYSFGIVLLQILSG 507
+ S D++S G+++ +L G
Sbjct: 203 DKSCDMWSLGVIMYILLCG 221
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 380 ECFLIYELCPNGNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHR 434
+C LI C +G LF + D+ + + EI + +LHS + I HR
Sbjct: 138 KCLLIVMECLDGGE---LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 191
Query: 435 DIKPTNILLG---PNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKV 488
D+KP N+L PN KL+DFG +K ET + + + T Y+ PE K
Sbjct: 192 DVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKY 246
Query: 489 NSSGDVYSFGIVLLQILSG 507
+ S D++S G+++ +L G
Sbjct: 247 DKSCDMWSLGVIMYILLCG 265
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 380 ECFLIYELCPNGNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHR 434
+C LI C +G LF + D+ + + EI + +LHS + I HR
Sbjct: 88 KCLLIVMECLDGGE---LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 141
Query: 435 DIKPTNILLG---PNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKV 488
D+KP N+L PN KL+DFG +K ET + + + T Y+ PE K
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKY 196
Query: 489 NSSGDVYSFGIVLLQILSG 507
+ S D++S G+++ +L G
Sbjct: 197 DKSCDMWSLGVIMYILLCG 215
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 380 ECFLIYELCPNGNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHR 434
+C LI C +G LF + D+ + + EI + +LHS + I HR
Sbjct: 86 KCLLIVMECLDGGE---LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 139
Query: 435 DIKPTNILLG---PNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKV 488
D+KP N+L PN KL+DFG +K ET + + + T Y+ PE K
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKY 194
Query: 489 NSSGDVYSFGIVLLQILSG 507
+ S D++S G+++ +L G
Sbjct: 195 DKSCDMWSLGVIMYILLCG 213
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 380 ECFLIYELCPNGNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHR 434
+C LI C +G LF + D+ + + EI + +LHS + I HR
Sbjct: 93 KCLLIVMECLDGGE---LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 146
Query: 435 DIKPTNILLG---PNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKV 488
D+KP N+L PN KL+DFG +K ET + + + T Y+ PE K
Sbjct: 147 DVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKY 201
Query: 489 NSSGDVYSFGIVLLQILSG 507
+ S D++S G+++ +L G
Sbjct: 202 DKSCDMWSLGVIMYILLCG 220
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 380 ECFLIYELCPNGNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHR 434
+C LI C +G LF + D+ + + EI + +LHS + I HR
Sbjct: 88 KCLLIVMECLDGGE---LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 141
Query: 435 DIKPTNILLG---PNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKV 488
D+KP N+L PN KL+DFG +K ET + + + T Y+ PE K
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKY 196
Query: 489 NSSGDVYSFGIVLLQILSG 507
+ S D++S G+++ +L G
Sbjct: 197 DKSCDMWSLGVIMYILLCG 215
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 380 ECFLIYELCPNGNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHR 434
+C LI C +G LF + D+ + + EI + +LHS + I HR
Sbjct: 92 KCLLIVMECLDGGE---LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 145
Query: 435 DIKPTNILLG---PNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKV 488
D+KP N+L PN KL+DFG +K ET + + + T Y+ PE K
Sbjct: 146 DVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKY 200
Query: 489 NSSGDVYSFGIVLLQILSG 507
+ S D++S G+++ +L G
Sbjct: 201 DKSCDMWSLGVIMYILLCG 219
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 380 ECFLIYELCPNGNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHR 434
+C LI C +G LF + D+ + + EI + +LHS + I HR
Sbjct: 87 KCLLIVMECLDGGE---LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 140
Query: 435 DIKPTNILLG---PNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKV 488
D+KP N+L PN KL+DFG +K ET + + + T Y+ PE K
Sbjct: 141 DVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKY 195
Query: 489 NSSGDVYSFGIVLLQILSG 507
+ S D++S G+++ +L G
Sbjct: 196 DKSCDMWSLGVIMYILLCG 214
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 380 ECFLIYELCPNGNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHR 434
+C LI C +G LF + D+ + + EI + +LHS + I HR
Sbjct: 102 KCLLIVMECLDGGE---LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHR 155
Query: 435 DIKPTNILLG---PNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKV 488
D+KP N+L PN KL+DFG +K ET + + + T Y+ PE K
Sbjct: 156 DVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKY 210
Query: 489 NSSGDVYSFGIVLLQILSG 507
+ S D++S G+++ +L G
Sbjct: 211 DKSCDMWSLGVIMYILLCG 229
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 318 NLIGEGITGKVYKGKLSN-NQHVAIKHIT----NEGNVETFVREVASSSHVRHPNLVALL 372
+LIG G G VY N N++VAIK + + + + +RE+ + ++ ++ L
Sbjct: 34 HLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLH 93
Query: 373 GYC-----LRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
L+ DE +++ E+ + +L + LF L+ I + G F+H
Sbjct: 94 DLIIPEDLLKFDELYIVLEIA-DSDLKK-LFKTPIFLTEQHVKTILYNLLLGEKFIH--- 148
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVID 461
E I+HRD+KP N LL + K+ DFGL++ I+
Sbjct: 149 ESGIIHRDLKPANCLLNQDCSVKICDFGLARTIN 182
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 12/198 (6%)
Query: 317 LNLIGEGITGKVYKGKLSNNQHV-AIKH-----ITNEGNVETFVREVASSSHVR-HPNLV 369
+ ++G+G GKV ++ + A+K I + +VE + E S R HP L
Sbjct: 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLT 87
Query: 370 ALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEG 429
L D F + E G+L + K + + A + L FLH
Sbjct: 88 QLFCCFQTPDRLFFVMEFVNGGDLM-FHIQKSRRFDEARARFYAAEIISALMFLHDKG-- 144
Query: 430 CIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVN 489
I++RD+K N+LL KL+DFG+ K I ++ GT Y+ PE
Sbjct: 145 -IIYRDLKLDNVLLDHEGHCKLADFGMCKE-GICNGVTTATFCGTPDYIAPEILQEMLYG 202
Query: 490 SSGDVYSFGIVLLQILSG 507
+ D ++ G++L ++L G
Sbjct: 203 PAVDWWAMGVLLYEMLCG 220
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPN 367
++LN L + E +G+++KG+ N + +K + + F E HPN
Sbjct: 10 KQLNFLTKLNENHSGELWKGRWQGND-IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68
Query: 368 LVALLGYCLR--VDECFLIYELCPNGNLAEWLF-GKDKCLSWIQRLEIAIDSARGLWFLH 424
++ +LG C LI P G+L L G + + Q ++ A+D ARG+ FLH
Sbjct: 69 VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH 128
Query: 425 SYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRS 484
+ E I + ++++ + A++S + D+ ++ S ++ PE
Sbjct: 129 TL-EPLIPRHALNSRSVMIDEDMTARIS------MADVKFSFQSPGRMYAPAWVAPEALQ 181
Query: 485 NCKVNS---SGDVYSFGIVLLQILS 506
++ S D++SF ++L ++++
Sbjct: 182 KKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 312 EKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNEGNVETFVREVA----SSSHVRHP 366
+ L + +G G G V K + + + Q A+K I N + R + S V P
Sbjct: 34 DDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCP 93
Query: 367 NLVALLGYCLRVDECFLIYELCPNG--NLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLH 424
V G R + ++ EL + + K + + +IA+ + L LH
Sbjct: 94 FTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 153
Query: 425 SYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSK--VIDIGETYASSEVRGTFGYLDPEY 482
S + ++HRD+KP+N+L+ + K DFG+S V D+ + + G Y PE
Sbjct: 154 S--KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA----GCKPYXAPE- 206
Query: 483 RSNCKVNSSG-----DVYSFGIVLLQI 504
R N ++N G D++S GI +++
Sbjct: 207 RINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE ++ V
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQ---------QAVNF 101
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 156
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ K++DFG +K + G T+ + GT YL P
Sbjct: 157 -YLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX---LCGTPEYLAP 208
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 368 LVALLGYCLRVDECFLIYE-LCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E + P +L +++ +R + + AR W +
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFI---------TERGALQEELARSFFWQVLE 125
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 182
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 37/219 (16%)
Query: 320 IGEGITGKVYKG-KLSNNQHVAIKHI----TNEGNVETFVREVASSSHVR-HPNLVALLG 373
+G+G G V+K + VA+K I N + + RE+ + + H N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 374 YCLRVD---ECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGC 430
LR D + +L+++ A + L + + + + + +LHS G
Sbjct: 77 -VLRADNDRDVYLVFDYMETDLHA---VIRANILEPVHKQYVVYQLIKVIKYLHS---GG 129
Query: 431 IVHRDIKPTNILLGPNFEAKLSDFGLSKV------------IDIGETYAS--------SE 470
++HRD+KP+NILL K++DFGLS+ + I E + ++
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 471 VRGTFGYLDPE-YRSNCKVNSSGDVYSFGIVLLQILSGK 508
T Y PE + K D++S G +L +IL GK
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQR--LEIAIDSARGLWFLH 424
++ LL + R D LI E P +L +++ + + R +++ R H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR-----H 125
Query: 425 SYSEGCIVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEY- 482
++ G ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y PE+
Sbjct: 126 CHNXG-VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 181
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSG 507
R + S V+S GI+L ++ G
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 12/195 (6%)
Query: 319 LIGEGITGKVYK-GKLSNNQHVAIKHITNEG--NVETFVREVASSSHVRHPNLVALLGYC 375
++G G G+V+K + + +A K I G + E E++ + + H NL+ L
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 376 LRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRD 435
++ L+ E G L + + + L+ + + G+ +H I+H D
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLD 212
Query: 436 IKPTNILLGPNFEAK---LSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSG 492
+KP NIL N +AK + DFGL++ E + GT +L PE + V+
Sbjct: 213 LKPENILC-VNRDAKQIKIIDFGLARRYKPREKLKVN--FGTPEFLAPEVVNYDFVSFPT 269
Query: 493 DVYSFGIVLLQILSG 507
D++S G++ +LSG
Sbjct: 270 DMWSVGVIAYMLLSG 284
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 21/137 (15%)
Query: 381 CFLIYELCPNGNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRD 435
C LI C G LF + D+ + + EI D + FLHS++ I HRD
Sbjct: 100 CLLIIMECMEGGE---LFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRD 153
Query: 436 IKPTNILLGPNFE---AKLSDFGLSKVIDIGETYASSEVRGTFG--YLDPEYRSNCKVNS 490
+KP N+L + KL+DFG +K ET ++ + Y+ PE K +
Sbjct: 154 VKPENLLYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDK 208
Query: 491 SGDVYSFGIVLLQILSG 507
S D++S G+++ +L G
Sbjct: 209 SCDMWSLGVIMYILLCG 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 21/137 (15%)
Query: 381 CFLIYELCPNGNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRD 435
C LI C G LF + D+ + + EI D + FLHS++ I HRD
Sbjct: 81 CLLIIMECMEGGE---LFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRD 134
Query: 436 IKPTNILLGPNFE---AKLSDFGLSKVIDIGETYASSEVRGTFG--YLDPEYRSNCKVNS 490
+KP N+L + KL+DFG +K ET ++ + Y+ PE K +
Sbjct: 135 VKPENLLYTSKEKDAVLKLTDFGFAK-----ETTQNALQTPCYTPYYVAPEVLGPEKYDK 189
Query: 491 SGDVYSFGIVLLQILSG 507
S D++S G+++ +L G
Sbjct: 190 SCDMWSLGVIMYILLCG 206
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 318 NLIGEGITGKVYKG-KLSNNQHVAIKHITNE-GNVETFV-REVASSSHVR-HPNLVALLG 373
+++GEG +V L +Q A+K I + G++ + V REV + H N++ L+
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 374 YCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVH 433
+ D +L++E G++ + K + + ++ + D A L FLH+ I H
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIH-KRRHFNELEASVVVQDVASALDFLHNKG---IAH 134
Query: 434 RDIKPTNILL-GPN--FEAKLSDFGLSKVIDIG---ETYASSEVR---GTFGYLDPEYRS 484
RD+KP NIL PN K+ DFGL I + ++ E+ G+ Y+ PE
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 485 NCKVNSS-----GDVYSFGIVLLQILSG 507
+S D++S G++L +LSG
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 40/217 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ +L IG G G V + L N VA+K ++ N+ + + RE+ V
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGIN--VAVKKLSRPFQNQTHAKRAYRELVLLKCVN 79
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q + + +D R
Sbjct: 80 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC-------------QVIHMELDHER 125
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ + +
Sbjct: 126 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--ASTNFMMTP 182
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
T Y PE + D++S G ++ +++ G
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 22/139 (15%)
Query: 380 ECFLIYELCPNGNLAEWLFGK-----DKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHR 434
+C LI C +G LF + D+ + + EI + +LHS + I HR
Sbjct: 132 KCLLIVXECLDGGE---LFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSIN---IAHR 185
Query: 435 DIKPTNILLG---PNFEAKLSDFGLSKVIDIGETYASSEVRG---TFGYLDPEYRSNCKV 488
D+KP N+L PN KL+DFG +K ET + + + T Y+ PE K
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSHNSLTTPCYTPYYVAPEVLGPEKY 240
Query: 489 NSSGDVYSFGIVLLQILSG 507
+ S D +S G++ +L G
Sbjct: 241 DKSCDXWSLGVIXYILLCG 259
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 33/228 (14%)
Query: 307 VHYATEKLNELNLIGEGITGKVYKGKLS-NNQHVAIKHITN-EGNVETFVREV---ASSS 361
+ YA++ E+ ++G+G G+V K + + ++++ AIK I + E + T + EV AS +
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLN 60
Query: 362 H---VRH-------PNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLE 411
H VR+ N V + F+ E C N L + + ++ +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 412 IAIDSARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVI----DI----- 462
+ L ++HS I+HR++KP NI + + K+ DFGL+K + DI
Sbjct: 121 LFRQILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 463 ----GETYASSEVRGTFGYLDPEYRSNC-KVNSSGDVYSFGIVLLQIL 505
G + + GT Y+ E N D YS GI+ + +
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 140
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 197
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 140
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 197
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNEG-----NVETFVREVASSSHVRH 365
++ + IG G G+V K + H A+K + + +E + E V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G++ L F + + ++ + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 155
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ K++DFG +K + G T+ + GT YL P
Sbjct: 156 -YLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX---LCGTPEYLAP 207
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNEG-----NVETFVREVASSSHVRH 365
++ + IG G G+V K + H A+K + + +E + E V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G++ L F + + ++ + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 155
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ K++DFG +K + G T+ + GT YL P
Sbjct: 156 -YLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX---LCGTPEYLAP 207
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 141
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 198
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFL 423
+HPN++ L +L+ EL G L + + + K S + + + + +L
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL-RQKFFSEREASFVLHTIGKTVEYL 137
Query: 424 HSYSEGCIVHRDIKPTNILL---GPNFE-AKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
HS +VHRD+KP+NIL N E ++ DFG +K + + T ++
Sbjct: 138 HSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVA 193
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILSG----------KKAKVLTRAGSA 519
PE + D++S GI+L +L+G ++LTR GS
Sbjct: 194 PEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSG 243
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 126
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 183
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 125
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 182
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 168
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 225
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 141
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 198
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 141
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 198
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 153
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 210
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 154
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 211
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 325 TGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE 380
TG Y K+ + Q V I+H NE + V P LV L
Sbjct: 65 TGNHYAMKILDKQKVVKLKEIEHTLNEKRI---------LQAVNFPFLVKLEFSFKDNSN 115
Query: 381 CFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRD 435
+++ E P G + L F + + ++ + + +LHS +++RD
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------YLHSLD---LIYRD 166
Query: 436 IKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
+KP N+++ K++DFGL+K + G T+ + GT YL PE + N + D +
Sbjct: 167 LKPENLMIDQQGYIKVTDFGLAKRVK-GRTWX---LCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 496 SFGIVLLQILSG 507
+ G+++ ++ +G
Sbjct: 223 ALGVLIYEMAAG 234
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVRH--PN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 154
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 211
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 153
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 210
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVRH--PN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 154
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 211
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 126
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 183
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 153
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 210
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 154
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 211
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 153
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 210
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 168
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 225
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 126
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 183
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 40/217 (18%)
Query: 312 EKLNELNLIGEGITGKV---YKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVR 364
++ +L IG G G V + L N VA+K ++ N+ + + RE+ V
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGIN--VAVKKLSRPFQNQTHAKRAYRELVLLKCVN 81
Query: 365 HPNLVALLGYCL------RVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSAR 418
H N+++LL + +L+ EL + NL Q + + +D R
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLC-------------QVIHMELDHER 127
Query: 419 GLWFL--------HSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSE 470
+ L H +S G I+HRD+KP+NI++ + K+ DFGL++ + +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART--ACTNFMMTP 184
Query: 471 VRGTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
T Y PE ++ D++S G ++ +++ G
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 121
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 178
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 124
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 181
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 182 EWIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFL 423
+HPN++ L +L+ EL G L + + + K S + + + + +L
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL-RQKFFSEREASFVLHTIGKTVEYL 137
Query: 424 HSYSEGCIVHRDIKPTNILL---GPNFE-AKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
HS +VHRD+KP+NIL N E ++ DFG +K + + T ++
Sbjct: 138 HSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVA 193
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILSG----------KKAKVLTRAGSA 519
PE + D++S GI+L +L+G ++LTR GS
Sbjct: 194 PEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSG 243
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVRH--PN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 160
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 161 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 217
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 218 EWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVRH--PN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 173
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 174 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 230
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 231 EWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTF 475
A+G+ FL S CI HRD+ NILL K+ DFGL++ I Y + R
Sbjct: 203 AKGMEFLASRK--CI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE + DV+SFG++L +I S
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 312 EKLNELNLIGEGITGKVYKGK-LSNNQHVAIKHITNEG-----NVETFVREVASSSHVRH 365
++ + IG G G+V K + H A+K + + +E + E V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 155
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ K++DFG +K + G T+ + GT YL P
Sbjct: 156 -YLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX---LCGTPEYLAP 207
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 121
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 178
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTF 475
A+G+ FL S CI HRD+ NILL K+ DFGL++ I Y + R
Sbjct: 210 AKGMEFLASRK--CI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE + DV+SFG++L +I S
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTF 475
A+G+ FL S CI HRD+ NILL K+ DFGL++ I Y + R
Sbjct: 208 AKGMEFLASRK--CI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE + DV+SFG++L +I S
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 417 ARGLWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYA-SSEVRGTF 475
A+G+ FL S CI HRD+ NILL K+ DFGL++ I Y + R
Sbjct: 201 AKGMEFLASRK--CI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 476 GYLDPEYRSNCKVNSSGDVYSFGIVLLQILS 506
++ PE + DV+SFG++L +I S
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 34/203 (16%)
Query: 275 KRYYKSNPPAKIT-SFKGVQLKDPGCPRYTIREVHYATEKLNELNLIGEGITGKVYKG-- 331
K+++ S P A + Q+ D RY IR +LIG G G V +
Sbjct: 31 KQHHSSKPTASMPRPHSDWQIPD----RYEIR------------HLIGTGSYGHVCEAYD 74
Query: 332 KLSNNQHVAIKHI----TNEGNVETFVREVASSSHVRHPNLVALLGYCL-----RVDECF 382
KL + VAIK I + + + +RE+A + + H ++V +L + + DE +
Sbjct: 75 KLEK-RVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY 133
Query: 383 LIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRDIKPTNIL 442
++ E+ + + LF L+ + + + G+ ++HS I+HRD+KP N L
Sbjct: 134 VVLEIADSD--FKKLFRTPVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCL 188
Query: 443 LGPNFEAKLSDFGLSKVIDIGET 465
+ + K+ DFGL++ +D E
Sbjct: 189 VNQDCSVKVCDFGLARTVDYPEN 211
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 319 LIGEGITGKVYKG-KLSNNQHVAIKH-----ITNEGNVETFVR---EVASSSHVR--HPN 367
L+G G G VY G ++S+N VAIKH I++ G + R EV V
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 368 LVALLGYCLRVDECFLIYELC-PNGNLAEWLFGKDKCLSWIQRLEIAIDSARGL-WFLHS 425
++ LL + R D LI E P +L +++ +R + + AR W +
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLE 148
Query: 426 YSEGC----IVHRDIKPTNILLGPNF-EAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
C ++HRDIK NIL+ N E KL DFG ++ + ++ GT Y P
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 205
Query: 481 EY-RSNCKVNSSGDVYSFGIVLLQILSG 507
E+ R + S V+S GI+L ++ G
Sbjct: 206 EWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFL 423
+HPN++ L +++ EL G L + + + K S + + + + +L
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL-RQKFFSEREASAVLFTITKTVEYL 132
Query: 424 HSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
H+ +VHRD+KP+NIL G ++ DFG +K + + T ++
Sbjct: 133 HAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANFVA 188
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILSG 507
PE +++ D++S G++L +L+G
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 101
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 156
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+++ K++DFG +K + G T+ + GT YL P
Sbjct: 157 -YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX---LCGTPEYLAP 208
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 309 YATEKLNELNLIGEGITGKVYK-GKLSNNQHVAIKH----ITNEGNVETFVREVASSSHV 363
Y TE +EL IG G G V+K K + AIK + + + +REV + + +
Sbjct: 7 YTTE-FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 364 -RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARG 419
+H ++V D + E C G+LA+ + + +S+ + E+ + RG
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLG----PNF---EAKLSDFGLSKVI 460
L ++HS S +VH DIKP+NI + PN E D+ +KV+
Sbjct: 126 LRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVM 170
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
Query: 309 YATEKLNELNLIGEGITGKVYK-GKLSNNQHVAIKH----ITNEGNVETFVREVASSSHV 363
Y TE +EL IG G G V+K K + AIK + + + +REV + + +
Sbjct: 9 YTTE-FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 364 -RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARG 419
+H ++V D + E C G+LA+ + + +S+ + E+ + RG
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 420 LWFLHSYSEGCIVHRDIKPTNILL 443
L ++HS S +VH DIKP+NI +
Sbjct: 128 LRYIHSMS---LVHMDIKPSNIFI 148
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 309 YATEKLNELNLIGEGITGKVYK-GKLSNNQHVAIKH----ITNEGNVETFVREVASSSHV 363
Y TE +EL IG G G V+K K + AIK + + + +REV + + +
Sbjct: 7 YTTE-FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 364 -RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARG 419
+H ++V D + E C G+LA+ + + +S+ + E+ + RG
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLG----PNF---EAKLSDFGLSKVI 460
L ++HS S +VH DIKP+NI + PN E D+ +KV+
Sbjct: 126 LRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVM 170
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 15/154 (9%)
Query: 318 NLIGEGITGKVYKGKLSNNQ-HVAIKHIT----NEGNVETFVREVASSSHVRHPNLVALL 372
+LIG G G VY N + +VAIK + + + + +RE+ + ++ ++ L
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLY 91
Query: 373 GYC-----LRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYS 427
L+ DE +++ E+ + +L + LF L+ I + G F+H
Sbjct: 92 DLIIPDDLLKFDELYIVLEIA-DSDLKK-LFKTPIFLTEEHIKTILYNLLLGENFIH--- 146
Query: 428 EGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVID 461
E I+HRD+KP N LL + K+ DFGL++ I+
Sbjct: 147 ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 325 TGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRHPNLVALLGYCLRVDE 380
TG Y K+ + Q V I+H NE + V P LV L
Sbjct: 65 TGNHYAMKILDKQKVVKLKEIEHTLNEKRI---------LQAVNFPFLVKLEFSFKDNSN 115
Query: 381 CFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHRD 435
+++ E P G + L F + + ++ + + +LHS +++RD
Sbjct: 116 LYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------YLHSLD---LIYRD 166
Query: 436 IKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPEYRSNCKVNSSGDVY 495
+KP N+++ +++DFGL+K + G T+ + GT YL PE + N + D +
Sbjct: 167 LKPENLMIDQQGYIQVTDFGLAKRVK-GRTWX---LCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 496 SFGIVLLQILSG 507
+ G+++ ++ +G
Sbjct: 223 ALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 100
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 155
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+++ K++DFG +K + G T+ + GT YL P
Sbjct: 156 -YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX---LCGTPEYLAP 207
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 309 YATEKLNELNLIGEGITGKVYK-GKLSNNQHVAIKH----ITNEGNVETFVREVASSSHV 363
Y TE +EL IG G G V+K K + AIK + + + +REV + + +
Sbjct: 5 YTTE-FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 364 -RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIA---IDSARG 419
+H ++V D + E C G+LA+ + + +S+ + E+ + RG
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLG----PNF---EAKLSDFGLSKVI 460
L ++HS S +VH DIKP+NI + PN E D+ +KV+
Sbjct: 124 LRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVM 168
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 101
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 156
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL P
Sbjct: 157 -YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLAP 208
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 41/223 (18%)
Query: 320 IGEGITGKVYKG----KLSNNQHVAIKHITNEGNVETFVREVASSSHVRHPNLVALLGYC 375
IGEG VY ++ + +A+KH+ + E+ + + V + YC
Sbjct: 29 IGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYC 88
Query: 376 LRV-DECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVHR 434
R D + + + + L LS+ + E ++ + L +H + IVHR
Sbjct: 89 FRKNDHVVIAMPYLEHESFLDIL----NSLSFQEVREYMLNLFKALKRIHQFG---IVHR 141
Query: 435 DIKPTNILLGPNFEA-KLSDFGLSK--------VIDIGETYASSE--------------- 470
D+KP+N L + L DFGL++ ++ ++ A E
Sbjct: 142 DVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQ 201
Query: 471 ----VRGTFGYLDPEYRSNCKVNSSG-DVYSFGIVLLQILSGK 508
GT G+ PE + C ++ D++S G++ L +LSG+
Sbjct: 202 QVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 100
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE----- 155
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+++ K++DFG +K + G T+ + GT YL P
Sbjct: 156 -YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX---LCGTPEYLAP 207
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 101
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 156
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL P
Sbjct: 157 -YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLAP 208
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 43 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 93
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 148
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL P
Sbjct: 149 -YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLAP 200
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 101
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 156
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL P
Sbjct: 157 -YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLAP 208
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 71 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 121
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 176
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL P
Sbjct: 177 -YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLAP 228
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 24/172 (13%)
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQ 408
+ E RE + ++HP++V LL ++++E ++ G D C ++
Sbjct: 71 STEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFE---------FMDGADLCFEIVK 121
Query: 409 RLE--------IAIDSARGLWFLHSY-SEGCIVHRDIKPTNILLGP---NFEAKLSDFGL 456
R + +A R + Y + I+HRD+KP +LL + KL FG+
Sbjct: 122 RADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 181
Query: 457 SKVIDIGETYASSEVR-GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ I +GE+ + R GT ++ PE DV+ G++L +LSG
Sbjct: 182 A--IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 364 RHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFL 423
+HPN++ L +++ EL G L + + + K S + + + + +L
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL-RQKFFSEREASAVLFTITKTVEYL 132
Query: 424 HSYSEGCIVHRDIKPTNILL----GPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
H+ +VHRD+KP+NIL G ++ DFG +K + + T ++
Sbjct: 133 HAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANFVA 188
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILSG 507
PE +++ D++S G++L L+G
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 36 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 86
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 141
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL P
Sbjct: 142 -YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWT---LCGTPEYLAP 193
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 194 EIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 101
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 156
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL P
Sbjct: 157 -YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWT---LCGTPEYLAP 208
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 24/172 (13%)
Query: 349 NVETFVREVASSSHVRHPNLVALLGYCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQ 408
+ E RE + ++HP++V LL ++++E ++ G D C ++
Sbjct: 69 STEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFE---------FMDGADLCFEIVK 119
Query: 409 RLE--------IAIDSARGLWFLHSY-SEGCIVHRDIKPTNILLGP---NFEAKLSDFGL 456
R + +A R + Y + I+HRD+KP +LL + KL FG+
Sbjct: 120 RADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179
Query: 457 SKVIDIGETYASSEVR-GTFGYLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
+ I +GE+ + R GT ++ PE DV+ G++L +LSG
Sbjct: 180 A--IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 40/217 (18%)
Query: 318 NLIGEGITGKVYKG-KLSNNQHVAIKHITNE-GNVETFV-REVASSSHVR-HPNLVALLG 373
L+GEG KV L N + A+K I + G+ + V REV + + + N++ L+
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 374 YCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVH 433
+ +L++E G++ + K K + + + D A L FLH+ I H
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHI-QKQKHFNEREASRVVRDVAAALDFLHTKG---IAH 134
Query: 434 RDIKPTNIL------LGPNFEAKLSDFGLSKVIDIGET---YASSEVR---GTFGYLDPE 481
RD+KP NIL + P K+ DF L + + + + E+ G+ Y+ PE
Sbjct: 135 RDLKPENILCESPEKVSP---VKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 482 -----------YRSNCKVNSSGDVYSFGIVLLQILSG 507
Y C D++S G+VL +LSG
Sbjct: 192 VVEVFTDQATFYDKRC------DLWSLGVVLYIMLSG 222
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 101
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 156
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL P
Sbjct: 157 -YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLAP 208
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 318 NLIGEGITGKVYKG-KLSNNQHVAIKHITNE-GNVETFV-REVASSSHVR-HPNLVALLG 373
+++GEG +V L +Q A+K I + G++ + V REV + H N++ L+
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 374 YCLRVDECFLIYELCPNGNLAEWLFGKDKCLSWIQRLEIAIDSARGLWFLHSYSEGCIVH 433
+ D +L++E G++ + K + + ++ + D A L FLH+ I H
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIH-KRRHFNELEASVVVQDVASALDFLHNKG---IAH 134
Query: 434 RDIKPTNILL-GPN--FEAKLSDFGLSKVIDIG---ETYASSEVR---GTFGYLDPEYRS 484
RD+KP NIL PN K+ DF L I + ++ E+ G+ Y+ PE
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 485 NCKVNSS-----GDVYSFGIVLLQILSG 507
+S D++S G++L +LSG
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 43 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 93
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE----- 148
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL P
Sbjct: 149 -YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLAP 200
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 100
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 155
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL P
Sbjct: 156 -YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLAP 207
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 100
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 155
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL P
Sbjct: 156 -YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLAP 207
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 100
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 155
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL P
Sbjct: 156 -YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLAP 207
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 24/243 (9%)
Query: 312 EKLNELNLIGEGITGKVYKGKLSNNQHVAIKHIT----NEGNVETFVREVASSSHVRHPN 367
++LN L + E +G+++KG+ N + +K + + F E HPN
Sbjct: 10 KQLNFLTKLNENHSGELWKGRWQGND-IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68
Query: 368 LVALLGYCLR--VDECFLIYELCPNGNLAEWLF-GKDKCLSWIQRLEIAIDSARGLWFLH 424
++ +LG C LI P G+L L G + + Q ++ A+D ARG FLH
Sbjct: 69 VLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH 128
Query: 425 SYSEGCIVHRDIKPTNILLGPNFEAKLS--DFGLSKVIDIGETYASSEVRGTFGYLDPEY 482
+ E I + ++ + + A++S D S G YA + V PE
Sbjct: 129 TL-EPLIPRHALNSRSVXIDEDXTARISXADVKFS-FQSPGRXYAPAWVAPEALQKKPED 186
Query: 483 RSNCKVNSSGDVYSFGIVLLQILSGKKAKVLTRAGSALELADPKLDREYSIEAFDLTLQL 542
+ S D +SF ++L ++ +TR +L++ ++ + ++E T+
Sbjct: 187 TN----RRSADXWSFAVLLWEL--------VTREVPFADLSNXEIGXKVALEGLRPTIPP 234
Query: 543 ALS 545
+S
Sbjct: 235 GIS 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 101
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE----- 156
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL P
Sbjct: 157 -YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLAP 208
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 100
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE----- 155
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL P
Sbjct: 156 -YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLAP 207
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 100
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 155
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+++ +++DFG +K + G T+ + GT YL P
Sbjct: 156 -YLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLAP 207
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 100
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P LV L +++ E P G + L F + + ++ + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE----- 155
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL P
Sbjct: 156 -YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLAP 207
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE 481
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL PE
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LXGTPEYLAPE 208
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSG 507
+ N + D ++ G+++ ++ +G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 37/211 (17%)
Query: 317 LNLIGEGITGKVYKGKLSN-NQHVAIKHITNEGNVETFVREVASS----SHVRHP----- 366
L +IG+G G+V K +QHVA+K + NE + F R+ A H+R
Sbjct: 102 LKVIGKGXFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 367 -NLVALL-GYCLRVDECFLIYELCPNGNLAEWLFGKDK----CLSWIQRLEIAIDSARGL 420
N++ +L + R C + +EL + NL E L K+K L +++ +I L
Sbjct: 159 MNVIHMLENFTFRNHIC-MTFELL-SMNLYE-LIKKNKFQGFSLPLVRKFAHSI-----L 210
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGET-YASSEVRGTFG--- 476
L + + I+H D+KP NILL + + KVID G + Y V
Sbjct: 211 QCLDALHKNRIIHCDLKPENILLKQQGRSGI------KVIDFGSSCYEHQRVYXXIQSRF 264
Query: 477 YLDPEYRSNCKVNSSGDVYSFGIVLLQILSG 507
Y PE + D++S G +L ++L+G
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 101
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P L L +++ E P G + L F + + ++ + +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 156
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+++ K++DFG +K + G T+ + GT YL P
Sbjct: 157 -YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX---LCGTPEYLAP 208
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 312 EKLNELNLIGEGITGKVY--KGKLSNNQHVAIKHITNEG-----NVETFVREVASSSHVR 364
++ + +G G G+V K K + N H A+K + + +E + E V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGN-HFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARG 419
P LV L +++ E P G + L F + + ++ + +
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE---- 155
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL
Sbjct: 156 --YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLA 206
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILSG 507
PE + N + D ++ G+++ ++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 310 ATEKLNELNLIGEGITGKVYKGKLSNNQHVA----IKHITNEGNVETFVREVASSSHVRH 365
T + L+ TG Y K+ + Q V I+H NE + V
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---------LQAVNF 101
Query: 366 PNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARGL 420
P L L +++ E P G + L F + + ++ + +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----- 156
Query: 421 WFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDP 480
+LHS +++RD+KP N+++ K++DFG +K + G T+ + GT YL P
Sbjct: 157 -YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX---LCGTPEYLAP 208
Query: 481 EYRSNCKVNSSGDVYSFGIVLLQILSG 507
E + N + D ++ G+++ ++ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 422 FLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLDPE 481
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL PE
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LAGTPEYLAPE 208
Query: 482 YRSNCKVNSSGDVYSFGIVLLQILSG 507
+ N + D ++ G+++ ++ +G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 312 EKLNELNLIGEGITGKVY--KGKLSNNQHVAIKHITNEG-----NVETFVREVASSSHVR 364
++ + +G G G+V K K + N H A+K + + +E + E V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGN-HFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 365 HPNLVALLGYCLRVDECFLIYELCPNGNLAEWL-----FGKDKCLSWIQRLEIAIDSARG 419
P LV L +++ E P G + L F + + ++ + +
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE---- 155
Query: 420 LWFLHSYSEGCIVHRDIKPTNILLGPNFEAKLSDFGLSKVIDIGETYASSEVRGTFGYLD 479
+LHS +++RD+KP N+L+ +++DFG +K + G T+ + GT YL
Sbjct: 156 --YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX---LCGTPEYLA 206
Query: 480 PEYRSNCKVNSSGDVYSFGIVLLQILSG 507
PE + N + D ++ G+++ ++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,116,606
Number of Sequences: 62578
Number of extensions: 644750
Number of successful extensions: 3656
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 273
Number of HSP's that attempted gapping in prelim test: 1396
Number of HSP's gapped (non-prelim): 1196
length of query: 588
length of database: 14,973,337
effective HSP length: 104
effective length of query: 484
effective length of database: 8,465,225
effective search space: 4097168900
effective search space used: 4097168900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)