BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042872
(381 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147783250|emb|CAN73069.1| hypothetical protein VITISV_005845 [Vitis vinifera]
Length = 1640
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/402 (56%), Positives = 267/402 (66%), Gaps = 64/402 (15%)
Query: 1 MDCHDFEFEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLA 60
MD HD E EKARLLSLAL+FGFD++SA K L+RL+ LYGDDGQDFI+VEHCGDDF+A L
Sbjct: 95 MDGHDLEMEKARLLSLALDFGFDEESAMKCLDRLVHLYGDDGQDFITVEHCGDDFLAALV 154
Query: 61 ETMQDSEEWDDLQAMESEACGALNNMFDKRVIDNNQANDNDNSREYIDILDDSPEPKRRP 120
E+++DSE+WDDLQA+E+EACG LN+MFD V+ ++ YI+ + S EP++
Sbjct: 155 ESVEDSEDWDDLQAIETEACGTLNDMFDNDVLHGYGSDYGIYREGYINATEYSYEPQKHQ 214
Query: 121 TLMELDSLSDTEDLDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVSTS 180
++LDS SD+ED F I +K A S PDG S FT SS+KH+S+SVD K V
Sbjct: 215 NFVQLDSSSDSEDSSFRILDKKGAAPTSPSWPDGSSSAFTQSSIKHASRSVDSKISVIQG 274
Query: 181 SASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAK 240
S SS+SNK+ S +S++E+GTLS+E L LDD E ANVVIFGNR FRPLQHQACKASV K
Sbjct: 275 SVSSISNKRARSQMSEDENGTLSYEALLDLDDFELANVVIFGNRTFRPLQHQACKASVTK 334
Query: 241 QDCFVLLPTGGGKSLCY---------------------QDQIITLNLKFGIPATFLNSQQ 279
+DCFVL+PTGGGKSLCY QDQIITLNL FGIPATFL+SQQ
Sbjct: 335 RDCFVLMPTGGGKSLCYQLPATLQPGVTVVVCPLLSLIQDQIITLNLNFGIPATFLSSQQ 394
Query: 280 TVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSE 339
T SQAAAVL+EL RKDKPSCKLLYVTPERI GN +F E
Sbjct: 395 TASQAAAVLKEL-----------------------RKDKPSCKLLYVTPERIAGNSTFFE 431
Query: 340 VLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+LK LH KG QLAGFVVDEAHCV
Sbjct: 432 ILKSLHWKG--------------------QLAGFVVDEAHCV 453
>gi|118489987|gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 617
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/406 (57%), Positives = 275/406 (67%), Gaps = 82/406 (20%)
Query: 1 MDCHDFEFEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLA 60
M D E E+AR LSLALEFGFD++SANK L+RLISLYG+DGQDFI+VE CGDDF+ LA
Sbjct: 1 MGGRDLELERARFLSLALEFGFDEESANKCLDRLISLYGEDGQDFITVECCGDDFLVALA 60
Query: 61 ETMQDSEEW--DDLQAMESEACGALNNMFDKRV-IDNNQANDNDNSREYIDILDDSPEPK 117
E+MQD+E+W DDLQ +ESEACG L NMF++ V +NN+AND+DNSR YID+ DDSPEPK
Sbjct: 61 ESMQDTEDWGDDDLQIIESEACGTLTNMFEEHVEKNNNKANDDDNSRTYIDVTDDSPEPK 120
Query: 118 RRPTLMELDSLSDTED-LDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSG 176
+ T MELDS SD+E+ DF++ ++ +FTP + K S S+DCKS
Sbjct: 121 KTRTFMELDSSSDSEEEPDFSLEEEN-------------HDLFTPLT-KRISGSLDCKSS 166
Query: 177 VSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKA 236
V+ S SSV NK++ +S ++H +L++EELQALDD E ANVVIFGN+ FRPLQHQACKA
Sbjct: 167 VTQGSVSSVGNKRQCPRMSKDDHRSLNYEELQALDDFELANVVIFGNKTFRPLQHQACKA 226
Query: 237 SVAKQDCFVLLPTGGGKSLCY---------------------QDQIITLNLKFGIPATFL 275
+VAKQDCFVL+PTGGGKSLCY QDQIITLNLKFGI ATFL
Sbjct: 227 TVAKQDCFVLMPTGGGKSLCYQLPATLKPGVTVVISPLLSLIQDQIITLNLKFGIRATFL 286
Query: 276 NSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQ 335
NSQQT +QAAA+LQEL RKDKPSCKLLYVTPERI GN
Sbjct: 287 NSQQTSAQAAAILQEL-----------------------RKDKPSCKLLYVTPERIAGNP 323
Query: 336 SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+F E+LKCLH KG QLAGFVVDEAHCV
Sbjct: 324 AFLEILKCLHLKG--------------------QLAGFVVDEAHCV 349
>gi|224123710|ref|XP_002330189.1| predicted protein [Populus trichocarpa]
gi|222871645|gb|EEF08776.1| predicted protein [Populus trichocarpa]
Length = 588
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/405 (54%), Positives = 254/405 (62%), Gaps = 109/405 (26%)
Query: 1 MDCHDFEFEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLA 60
M D E E+AR LSLALEFGFD++SANK L+RLISLYGDDGQDFI+VE CGDDF+ LA
Sbjct: 1 MGGRDLELERARFLSLALEFGFDEESANKCLDRLISLYGDDGQDFITVECCGDDFLVALA 60
Query: 61 ETMQDSEEW--DDLQAMESEACGALNNMFDKRVIDNNQANDNDN-SREYIDILDDSPEPK 117
E+MQD+E+W DDLQ +ESEACG L NMF++ V+ NN ++D+ SR YID+ DDSPEPK
Sbjct: 61 ESMQDTEDWGDDDLQIIESEACGTLTNMFEEHVVKNNNKANDDDNSRTYIDVTDDSPEPK 120
Query: 118 RRPTLMELDSLSDTEDLDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGV 177
+ T MELDS SD+E+ PD
Sbjct: 121 KTRTFMELDSSSDSEEE-----------------PD------------------------ 139
Query: 178 STSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKAS 237
SS SSV NK++ +S ++H +L++EELQALDD E ANVVIFGN+ FRPLQHQACKA+
Sbjct: 140 -FSSVSSVGNKRQCPRMSKDDHRSLNYEELQALDDFELANVVIFGNKTFRPLQHQACKAT 198
Query: 238 VAKQDCFVLLPTGGGKSLCY---------------------QDQIITLNLKFGIPATFLN 276
VAKQDCFVL+PTGGGKSLCY QDQIITLNLKFGIPATFLN
Sbjct: 199 VAKQDCFVLMPTGGGKSLCYQLPATLKPGVTVVISPLLSLIQDQIITLNLKFGIPATFLN 258
Query: 277 SQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQS 336
SQQT +QAAA+LQELR DKPSCKLLYVTPERI GN +
Sbjct: 259 SQQTSAQAAAILQELRH-----------------------DKPSCKLLYVTPERIAGNPA 295
Query: 337 FSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F E+LKCLH KG QLAGFVVDEAHCV
Sbjct: 296 FLEILKCLHLKG--------------------QLAGFVVDEAHCV 320
>gi|296089753|emb|CBI39572.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/402 (52%), Positives = 247/402 (61%), Gaps = 98/402 (24%)
Query: 1 MDCHDFEFEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLA 60
MD HD E EKARLLSLAL+FGFD++SA K L+RL+ LYGDDGQDFI+VEHCGDDF+A L
Sbjct: 1 MDGHDLEMEKARLLSLALDFGFDEESAMKCLDRLVHLYGDDGQDFITVEHCGDDFLAALV 60
Query: 61 ETMQDSEEWDDLQAMESEACGALNNMFDKRVIDNNQANDNDNSREYIDILDDSPEPKRRP 120
E+++DSE+WDDLQA+E+EACG LN+MFD
Sbjct: 61 ESVEDSEDWDDLQAIETEACGTLNDMFDN------------------------------- 89
Query: 121 TLMELDSLSDTEDLDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVSTS 180
D + S DG S FT SS+KH+S+SVD K V
Sbjct: 90 ----------------------DVLHGYGSDYDGSSSAFTQSSIKHASRSVDSKISVIQG 127
Query: 181 SASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAK 240
S SS+SNK+ S +S++E+GTLS+E L LDD E ANVVIFGNR FRPLQHQACKASV K
Sbjct: 128 SVSSISNKRARSQMSEDENGTLSYEALLDLDDFELANVVIFGNRTFRPLQHQACKASVTK 187
Query: 241 QDCFVLLPTGGGKSLCY---------------------QDQIITLNLKFGIPATFLNSQQ 279
+DCFVL+PTGGGKSLCY QDQIITLNL FGIPATFL+SQQ
Sbjct: 188 RDCFVLMPTGGGKSLCYQLPATLQPGVTVVVCPLLSLIQDQIITLNLNFGIPATFLSSQQ 247
Query: 280 TVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSE 339
T SQAAAVL+ELR L+ F Q ++L KDKPSCKLLYVTPERI GN +F E
Sbjct: 248 TASQAAAVLKELR--LLFPGICF--QNCYLLLSFEVKDKPSCKLLYVTPERIAGNSTFFE 303
Query: 340 VLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+LK LH KG QLAGFVVDEAHCV
Sbjct: 304 ILKSLHWKG--------------------QLAGFVVDEAHCV 325
>gi|255542856|ref|XP_002512491.1| DNA helicase hus2, putative [Ricinus communis]
gi|223548452|gb|EEF49943.1| DNA helicase hus2, putative [Ricinus communis]
Length = 586
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/412 (53%), Positives = 257/412 (62%), Gaps = 104/412 (25%)
Query: 1 MDCHDFEFEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLA 60
M HD E EKAR LSLA E GFD++SANK L+RLISLYGDDGQDF++VE CGDDF+A LA
Sbjct: 1 MARHDLELEKARFLSLAQECGFDEESANKCLDRLISLYGDDGQDFVTVECCGDDFLAALA 60
Query: 61 ETMQDSEEWDD-LQAMESEACGALNN-MF-DKRVIDNN----QANDNDNSREYIDILDDS 113
E+M+DSE+WDD LQA+ESEACGAL N MF D+ I++N +N+N+R YI++ DD
Sbjct: 61 ESMRDSEDWDDDLQAIESEACGALANYMFSDENAINSNCTKVDNGNNENARGYINVTDDD 120
Query: 114 PEPKRRPTLMELDSLSDTE---DLDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKS 170
EPK + T M+LDS S +E D +F+I + K ++
Sbjct: 121 DEPKEKQTWMDLDSSSVSEESEDPEFSITEGKSSL------------------------- 155
Query: 171 VDCKSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQ 230
++ SASS+ NKK+ I + LS+EELQALDD E ANVVIFGN +FRPLQ
Sbjct: 156 -----SATSGSASSICNKKKHPGIQKDGRPMLSYEELQALDDFELANVVIFGNMSFRPLQ 210
Query: 231 HQACKASVAKQDCFVLLPTGGGKSLCY---------------------QDQIITLNLKFG 269
HQACKASVAK+DCFVL+PTGGGKSLCY QDQIITLNLKFG
Sbjct: 211 HQACKASVAKRDCFVLMPTGGGKSLCYQLPATLKPGVTVVVSPLLSLIQDQIITLNLKFG 270
Query: 270 IPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPE 329
IPATFLNSQQT SQAAAVLQEL RKDKPSCKLLYVTPE
Sbjct: 271 IPATFLNSQQTASQAAAVLQEL-----------------------RKDKPSCKLLYVTPE 307
Query: 330 RIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
RI GN F E+LKCLH KG QLAGFVVDEAHCV
Sbjct: 308 RIAGNLGFLEILKCLHWKG--------------------QLAGFVVDEAHCV 339
>gi|357441847|ref|XP_003591201.1| Bloom syndrome protein-like protein [Medicago truncatula]
gi|355480249|gb|AES61452.1| Bloom syndrome protein-like protein [Medicago truncatula]
Length = 603
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 203/399 (50%), Positives = 247/399 (61%), Gaps = 98/399 (24%)
Query: 4 HDFEFEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLAETM 63
HD E EK RL+SLALE GFD+ +AN+ +RL+SLYGDDG+DFI+VEHCGDDF+A L E++
Sbjct: 14 HDLELEKVRLISLALELGFDELAANQCFDRLVSLYGDDGRDFITVEHCGDDFLAALGESV 73
Query: 64 QDSEEWDDLQAMESEACGALNNMFDKRVIDNNQANDNDNSREYIDILDDSPEPKRRPTLM 123
Q++EEWDDL MES+A G LN++ D R D S+ +IDI+DDSP+ K+ +
Sbjct: 74 QNTEEWDDLHEMESQAVGTLNHVLDTR---------GDGSKCFIDIIDDSPK-KQGNKFV 123
Query: 124 ELDSLSDTEDLDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVSTSSAS 183
EL S D ED +F + S V+H + V+ + G++ S S
Sbjct: 124 ELGSSDDEEDTNFDV-----------------------SRVQHPTNLVNGRKGITQGSVS 160
Query: 184 SVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDC 243
S S K +SS D + TLS+EEL+ LDD+E ANVVIFGN++ RPLQHQACKA++AKQD
Sbjct: 161 STSRKIKSSAAKD-RNSTLSYEELKTLDDIELANVVIFGNKSLRPLQHQACKAALAKQDS 219
Query: 244 FVLLPTGGGKSLCY---------------------QDQIITLNLKFGIPATFLNSQQTVS 282
F+L+PTGGGKSLCY QDQIITLNLKFGIPATFLNSQQ S
Sbjct: 220 FILMPTGGGKSLCYQLPATLQPGVTVVVSPLLSLIQDQIITLNLKFGIPATFLNSQQNAS 279
Query: 283 QAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLK 342
QAAAVLQEL RKDKPSCKLLYVTPERI GNQSF +LK
Sbjct: 280 QAAAVLQEL-----------------------RKDKPSCKLLYVTPERIAGNQSFVGILK 316
Query: 343 CLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
C+H+KG QLAGFVVDEAHCV
Sbjct: 317 CMHQKG--------------------QLAGFVVDEAHCV 335
>gi|225450636|ref|XP_002282715.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Vitis
vinifera]
Length = 602
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 215/402 (53%), Positives = 254/402 (63%), Gaps = 87/402 (21%)
Query: 1 MDCHDFEFEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLA 60
MD HD E EKARLLSLAL+FGFD++SA K L+RL+ LYGDDGQDFI+VEHCGDDF+A L
Sbjct: 1 MDGHDLEMEKARLLSLALDFGFDEESAMKCLDRLVHLYGDDGQDFITVEHCGDDFLAALV 60
Query: 61 ETMQDSEEWDDLQAMESEACGALNNMFDKRVIDNNQANDNDNSREYIDILDDSPEPKRRP 120
E+++DSE+WDDLQA+E+EACG LN+MFD V+ ++ YI+ + S EP++
Sbjct: 61 ESVEDSEDWDDLQAIETEACGTLNDMFDNDVLHGYGSDYGIYREGYINATEYSYEPQKHQ 120
Query: 121 TLMELDSLSDTEDLDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVSTS 180
++LDS SD+ED F I +K A S PDG S+S
Sbjct: 121 NFVQLDSSSDSEDSSFRILDKKGAAPTSPSWPDG-----------------------SSS 157
Query: 181 SASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAK 240
S SS+SNK+ S +S++E+GTLS+E L LDD E ANVVIFGNR FRPLQHQACKASV K
Sbjct: 158 SVSSISNKRARSQMSEDENGTLSYEALLDLDDFELANVVIFGNRTFRPLQHQACKASVTK 217
Query: 241 QDCFVLLPTGGGKSLCY---------------------QDQIITLNLKFGIPATFLNSQQ 279
+DCFVL+PTGGGKSLCY QDQIITLNL FGIPATFL+SQQ
Sbjct: 218 RDCFVLMPTGGGKSLCYQLPATLQPGVTVVVCPLLSLIQDQIITLNLNFGIPATFLSSQQ 277
Query: 280 TVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSE 339
T SQAAAVL+EL RKDKPSCKLLYVTPERI GN +F E
Sbjct: 278 TASQAAAVLKEL-----------------------RKDKPSCKLLYVTPERIAGNSTFFE 314
Query: 340 VLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+LK LH KG QLAGFVVDEAHCV
Sbjct: 315 ILKSLHWKG--------------------QLAGFVVDEAHCV 336
>gi|356533550|ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
1-like [Glycine max]
Length = 612
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 208/405 (51%), Positives = 255/405 (62%), Gaps = 97/405 (23%)
Query: 4 HDFEFEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLAETM 63
D E EK RL+SLALEFGFD+ SANK L+RLI+LYG+DG+DFI+VEHCGDDF+A LAE+M
Sbjct: 10 QDLELEKVRLISLALEFGFDESSANKCLDRLIALYGEDGRDFITVEHCGDDFLAALAESM 69
Query: 64 QDSEEWDDLQAMESEACGALNNMFDKRVIDNNQANDNDNSRE-YIDILDDSPEPKRRP-- 120
Q +E+WDD Q MES+ACG L ++ DK V A+++D SR ++DI+DDSP+P+RR
Sbjct: 70 Q-TEDWDDQQEMESQACGTLTHVLDKTVDTCADADNDDASRSFFVDIVDDSPQPQRRKGK 128
Query: 121 ---TLMELDSLSDTEDLDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGV 177
++ELDS SD ED+ ++ ++K + +Q F +
Sbjct: 129 SHTNVVELDS-SDDEDMHCSVSREKPTV----------TQXF---------------DFI 162
Query: 178 STSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKAS 237
S SS S+K +SS S + + ++EELQALDD+E ANVVIFGNR FRPLQHQACKA+
Sbjct: 163 IIWSVSSTSSKMQSSFASRDTSSSPTYEELQALDDIELANVVIFGNRTFRPLQHQACKAA 222
Query: 238 VAKQDCFVLLPTGGGKSLCY---------------------QDQIITLNLKFGIPATFLN 276
+AKQD F+L+PTGGGKSLCY QDQIITLNLKFGIP+TFLN
Sbjct: 223 LAKQDSFILMPTGGGKSLCYQLPATLQPGVTVVVSPLLSLIQDQIITLNLKFGIPSTFLN 282
Query: 277 SQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQS 336
SQQT SQ AVLQEL RKDKPSCKLLYVTPERI GNQS
Sbjct: 283 SQQTASQVTAVLQEL-----------------------RKDKPSCKLLYVTPERIAGNQS 319
Query: 337 FSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F E+LK +H+KG QLAGFVVDEAHCV
Sbjct: 320 FLEILKFMHQKG--------------------QLAGFVVDEAHCV 344
>gi|30679600|ref|NP_187225.2| ATP-dependent DNA helicase Q-like 1 [Arabidopsis thaliana]
gi|75334309|sp|Q9FT74.1|RQL1_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 1; AltName:
Full=RecQ-like protein 1; Short=AtRecQ1; Short=AtRecQl1
gi|10944747|emb|CAC14163.1| DNA Helicase [Arabidopsis thaliana]
gi|332640767|gb|AEE74288.1| ATP-dependent DNA helicase Q-like 1 [Arabidopsis thaliana]
Length = 606
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 203/414 (49%), Positives = 250/414 (60%), Gaps = 107/414 (25%)
Query: 1 MDCHDFEFEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLA 60
M D E EK RL+SLA + GFD+DSA K L+R + LYGDDG+DFI+VE CGDDF+A LA
Sbjct: 1 MKDQDLELEKVRLISLATKLGFDEDSAKKCLDRFVDLYGDDGRDFITVELCGDDFLAALA 60
Query: 61 ETMQDSEEWDDLQAMESEACGALNNMFDKRVIDNNQANDNDN----------SREYIDIL 110
+ + +EEWDD+QA+ESEA G L MFDK N +DN SR + ++
Sbjct: 61 DFEEGTEEWDDIQAIESEAQGNLAEMFDK------STNPSDNGFDTDDDDDDSRVEVHVI 114
Query: 111 DDSPEPKRRPTLMELDSLSDTEDLD--FTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSS 168
+DSPEPK++P ++ELDS SD ED++ F +P+ RSQ S
Sbjct: 115 EDSPEPKKKPEIVELDSSSDLEDVETRFKVPR--------------RSQT--------CS 152
Query: 169 KSVDCKSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRP 228
+S+D S S++S +K S IS+ +H T S+EELQALDD+EFAN+VIFGN+ FRP
Sbjct: 153 RSMDYSM---EDSVSTISGRKPSVQISNKDHETPSYEELQALDDLEFANLVIFGNKVFRP 209
Query: 229 LQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QDQIITLNLK 267
LQHQAC+AS+ ++DCFVL+PTGGGKSLCY QDQI+ LNLK
Sbjct: 210 LQHQACRASMERKDCFVLMPTGGGKSLCYQLPATLKAGVTIVISPLLSLIQDQIVALNLK 269
Query: 268 FGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVT 327
FGIPATFLNSQQT SQAAAVLQEL R+D PSCKLLYVT
Sbjct: 270 FGIPATFLNSQQTSSQAAAVLQEL-----------------------RRDNPSCKLLYVT 306
Query: 328 PERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
PE+I G+ SF E L+CL RKG LAGFVVDEAHCV
Sbjct: 307 PEKIAGSSSFLETLRCLDRKG--------------------LLAGFVVDEAHCV 340
>gi|449454038|ref|XP_004144763.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Cucumis
sativus]
Length = 601
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 195/403 (48%), Positives = 244/403 (60%), Gaps = 92/403 (22%)
Query: 1 MDCHDFEFEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLA 60
M HD E E+ARLLSLA E GFD+ SA L+R+I+LYGDDG++F+SVEHCGDDF+A LA
Sbjct: 1 MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60
Query: 61 ETMQDSEEWDDLQAMESEACGALNNMFDKRVIDNNQANDNDNSREYIDILDDSPEPKRRP 120
E+ D+EEWDDLQAMESEACGAL+ + D+ V + + A + N I+I++DS E + P
Sbjct: 61 ESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEENP 120
Query: 121 TLMELDSLSDT-EDLDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVST 179
L+ +DS S++ ED +F K+++ V K+ +
Sbjct: 121 NLVNIDSSSESDEDANFNASKKRNL--------------------------VQGKNSTTR 154
Query: 180 SSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVA 239
S S +++ S S+ TL++EELQ LDD E ANVVIFGN+AFRPLQH+ACKA+ +
Sbjct: 155 GSVYSSPGERQYSRTSEAGPKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAAS 214
Query: 240 KQDCFVLLPTGGGKSLCY---------------------QDQIITLNLKFGIPATFLNSQ 278
KQDCF+L+PTGGGKSLCY QDQI+TLNLKFGIP+TFLNSQ
Sbjct: 215 KQDCFILMPTGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQ 274
Query: 279 QTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFS 338
QT SQAA VLQELRQ DKPSCKLLYVTPERI QSF
Sbjct: 275 QTSSQAAVVLQELRQ-----------------------DKPSCKLLYVTPERI-ATQSFL 310
Query: 339 EVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E+L+ +H K +QLAGFVVDEAHCV
Sbjct: 311 EILRFMHMK--------------------KQLAGFVVDEAHCV 333
>gi|449517902|ref|XP_004165983.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Cucumis
sativus]
Length = 601
Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 193/403 (47%), Positives = 242/403 (60%), Gaps = 92/403 (22%)
Query: 1 MDCHDFEFEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLA 60
M HD E E+ARLLSLA E GFD+ SA L+R+I+LYGDDG++F+SVEHCGDDF+A LA
Sbjct: 1 MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60
Query: 61 ETMQDSEEWDDLQAMESEACGALNNMFDKRVIDNNQANDNDNSREYIDILDDSPEPKRRP 120
E+ D+EEWDDLQAMESEACGAL+ + D+ V + + A + N I+I++DS E + P
Sbjct: 61 ESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEENP 120
Query: 121 TLMELDSLSDT-EDLDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVST 179
L+ + S S++ ED +F K+++ V K+ +
Sbjct: 121 NLVNIGSSSESDEDANFNASKKRNL--------------------------VQGKNSTTR 154
Query: 180 SSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVA 239
S S +++ S S+ TL++EELQ LDD E ANVVIFGN+AFRPLQH+ACKA+ +
Sbjct: 155 GSVYSSPGERQYSRTSEAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAAS 214
Query: 240 KQDCFVLLPTGGGKSLCY---------------------QDQIITLNLKFGIPATFLNSQ 278
KQDCF+L+PTGGGKSLCY QDQI+TLNLKFGIP+TFLNSQ
Sbjct: 215 KQDCFILMPTGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQ 274
Query: 279 QTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFS 338
QT SQAA VLQELRQ DKPSCKLLYVTPERI QSF
Sbjct: 275 QTSSQAAVVLQELRQ-----------------------DKPSCKLLYVTPERI-ATQSFL 310
Query: 339 EVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E+L+ +H K +QLA FVVDEAHCV
Sbjct: 311 EILRFMHMK--------------------KQLASFVVDEAHCV 333
>gi|6714387|gb|AAF26076.1|AC012393_2 putative DNA helicase [Arabidopsis thaliana]
Length = 624
Score = 343 bits (880), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 203/432 (46%), Positives = 250/432 (57%), Gaps = 125/432 (28%)
Query: 1 MDCHDFEFEKARLLSLALEFGFDQDSANKSLNRLISLYG------------------DDG 42
M D E EK RL+SLA + GFD+DSA K L+R + LYG DDG
Sbjct: 1 MKDQDLELEKVRLISLATKLGFDEDSAKKCLDRFVDLYGTKIQIKILETYALVIDCGDDG 60
Query: 43 QDFISVEHCGDDFIATLAETMQDSEEWDDLQAMESEACGALNNMFDKRVIDNNQANDNDN 102
+DFI+VE CGDDF+A LA+ + +EEWDD+QA+ESEA G L MFDK N +DN
Sbjct: 61 RDFITVELCGDDFLAALADFEEGTEEWDDIQAIESEAQGNLAEMFDK------STNPSDN 114
Query: 103 ----------SREYIDILDDSPEPKRRPTLMELDSLSDTEDLD--FTIPKQKDAILNLSS 150
SR + +++DSPEPK++P ++ELDS SD ED++ F +P+
Sbjct: 115 GFDTDDDDDDSRVEVHVIEDSPEPKKKPEIVELDSSSDLEDVETRFKVPR---------- 164
Query: 151 CPDGRSQIFTPSSVKHSSKSVDCKSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQAL 210
RSQ S+S+D S S++S +K S IS+ +H T S+EELQAL
Sbjct: 165 ----RSQT--------CSRSMDYSM---EDSVSTISGRKPSVQISNKDHETPSYEELQAL 209
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------- 257
DD+EFAN+VIFGN+ FRPLQHQAC+AS+ ++DCFVL+PTGGGKSLCY
Sbjct: 210 DDLEFANLVIFGNKVFRPLQHQACRASMERKDCFVLMPTGGGKSLCYQLPATLKAGVTIV 269
Query: 258 --------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
QDQI+ LNLKFGIPATFLNSQQT SQAAAVLQEL
Sbjct: 270 ISPLLSLIQDQIVALNLKFGIPATFLNSQQTSSQAAAVLQEL------------------ 311
Query: 310 LTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
R+D PSCKLLYVTPE+I G+ SF E L+CL RKG
Sbjct: 312 -----RRDNPSCKLLYVTPEKIAGSSSFLETLRCLDRKG--------------------L 346
Query: 370 LAGFVVDEAHCV 381
LAGFVVDEAHCV
Sbjct: 347 LAGFVVDEAHCV 358
>gi|413920232|gb|AFW60164.1| hypothetical protein ZEAMMB73_604033 [Zea mays]
Length = 618
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/398 (38%), Positives = 214/398 (53%), Gaps = 79/398 (19%)
Query: 9 EKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLAETMQDSEE 68
E+ RLL LA+E GFD+D A L RL+ +YG+DG D ++V++CG+DF+A+LA+ Q +++
Sbjct: 9 EQHRLLDLAVESGFDRDLAASCLARLLEVYGEDGLDMVTVDNCGNDFLASLADATQPTDD 68
Query: 69 WDDLQAMESEACGALNNMFDKRVIDNNQANDNDNSREYIDILDDSPEP----KRRPTLME 124
WDDL+ +E+EACG LN+M K V D N ID S EP +R P +E
Sbjct: 69 WDDLKGIETEACGNLNDMMMKNVPDCNGG-------VAIDSRYTSREPNSSSQRAPNHLE 121
Query: 125 LDSLSDTEDLDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVSTSSASS 184
+ ++D DF + D ++ R+ + + S+KS + +
Sbjct: 122 AFKFA-SDDSDFEMDNLPDKSCSMQRQTQSRN---SGMQTRSSAKSTVTRETSRYEPTTP 177
Query: 185 VSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCF 244
SN++ LS+E+L LDD+ FAN VIFGN+ FRPLQ++AC+A++ QDCF
Sbjct: 178 TSNREMPPAAFHQRRELLSYEQLCCLDDVNFANAVIFGNKGFRPLQYEACRAAMDNQDCF 237
Query: 245 VLLPTGGGKSLCY---------------------QDQIITLNLKFGIPATFLNSQQTVSQ 283
+L+PTGGGKSLCY QDQI+ L +F +PA FLNSQQT +Q
Sbjct: 238 ILMPTGGGKSLCYQLPATLHPGVTVVVSPLLSLIQDQIVALTYRFAVPAAFLNSQQTSAQ 297
Query: 284 AAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKC 343
A+AV+QELR G KP+ KLLYVTPERIV N SF E L+
Sbjct: 298 ASAVIQELRCG-----------------------KPAFKLLYVTPERIVTNYSFMETLRG 334
Query: 344 LHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L ++G LA FV+DEAHCV
Sbjct: 335 LDQRG--------------------LLARFVIDEAHCV 352
>gi|357155794|ref|XP_003577240.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Brachypodium
distachyon]
Length = 599
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/395 (39%), Positives = 203/395 (51%), Gaps = 88/395 (22%)
Query: 8 FEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLAETMQDSE 67
E+ RLL LA +GFD+ A + L++LYG DGQ FI+VE+CGDDF+ LA+ QD++
Sbjct: 4 IERERLLELAAGYGFDRGLAADCIATLLNLYGADGQGFITVENCGDDFLGALADATQDTD 63
Query: 68 EWDDLQAMESEACGALNNMFDKRVIDNNQANDNDNSREYIDILDDSPEPKRRPTLMELDS 127
+WDDL A+E+EACG LN M K V E + ++P +R T S
Sbjct: 64 DWDDLNAIETEACGNLNKMMGKGV-----------PHEKGGVAANTPLSERANT-----S 107
Query: 128 LSDTEDLDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVSTSSASSVSN 187
T D T+ D + S T V S S + S+
Sbjct: 108 SQHTPDNPKTLSFSSDDDSDFEMTTHRDSSFGTQKKVTKGSNRY--------GSPTPTSS 159
Query: 188 KKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLL 247
K+R + TLS+E+L LDD+ AN VIFGN++FRPLQ++AC A++ +DCF+L+
Sbjct: 160 KERRPNTFHQKRETLSYEQLSCLDDLNLANAVIFGNKSFRPLQYEACSAALNNRDCFILM 219
Query: 248 PTGGGKSLCY---------------------QDQIITLNLKFGIPATFLNSQQTVSQAAA 286
PTGGGKSLCY QDQ++ L KFGI A+FLNSQQT SQA+
Sbjct: 220 PTGGGKSLCYQLPATLHPGVTVVVCPLLSLIQDQVVALTFKFGIQASFLNSQQTSSQASV 279
Query: 287 VLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHR 346
V+QELR G PS KLLYVTPER+VGN SF E+L+ LH+
Sbjct: 280 VMQELRNG-----------------------TPSFKLLYVTPERMVGNYSFMEILRGLHQ 316
Query: 347 KGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+G LA FV+DEAHCV
Sbjct: 317 RG--------------------LLARFVIDEAHCV 331
>gi|242071927|ref|XP_002451240.1| hypothetical protein SORBIDRAFT_05g026350 [Sorghum bicolor]
gi|241937083|gb|EES10228.1| hypothetical protein SORBIDRAFT_05g026350 [Sorghum bicolor]
Length = 624
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 158/399 (39%), Positives = 212/399 (53%), Gaps = 86/399 (21%)
Query: 13 LLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLAETMQDSEEWDDL 72
LL LA+E GFD+D A L RL+ +YG+DG ++VE+CG+DF+A+LA+ Q +++WDDL
Sbjct: 16 LLDLAVESGFDRDLAASCLARLLEVYGEDGLALVTVENCGNDFLASLADATQPTDDWDDL 75
Query: 73 QAMESEACGALNNMFDKRVIDNNQANDNDN---SRE---YIDILDDSPEPKRRPTLMEL- 125
+ +E+EACG LN+M K V D DN SRE D LD S + +
Sbjct: 76 KGIETEACGNLNDMMMKNVTDCTGGVAMDNSHTSREPNLSSDALDHSEDFDFASDDSDFE 135
Query: 126 --DSLSDTEDLDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVSTSSAS 183
D + + D F + +Q + +S RS S+KS ++ S +
Sbjct: 136 MGDGMDNLHDNSFNMQRQTQS---RNSGMQSRS----------SAKSTVTRATNRYESMT 182
Query: 184 SVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDC 243
SN++ LS+E+L LDD+ FANVVIFGN++FRPLQ++AC+A++ QDC
Sbjct: 183 PTSNREMPPAAFHQRREVLSYEQLCGLDDVNFANVVIFGNKSFRPLQYEACRAAMNNQDC 242
Query: 244 FVLLPTGGGKSLCY---------------------QDQIITLNLKFGIPATFLNSQQTVS 282
F+L+PTGGGKSLCY QDQI+ L KF IPA FLNSQQT +
Sbjct: 243 FILMPTGGGKSLCYQLPATLHPGVTVVVSPLLSLIQDQIVALTYKFAIPAAFLNSQQTPA 302
Query: 283 QAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLK 342
QA+AV+QELR G PS KLLYVTPERI N SF E+L+
Sbjct: 303 QASAVIQELRYG-----------------------TPSFKLLYVTPERIAANYSFMEMLR 339
Query: 343 CLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L ++G LA FV+DEAHCV
Sbjct: 340 GLDQRG--------------------LLARFVIDEAHCV 358
>gi|115486585|ref|NP_001068436.1| Os11g0672700 [Oryza sativa Japonica Group]
gi|77552472|gb|ABA95269.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
gi|113645658|dbj|BAF28799.1| Os11g0672700 [Oryza sativa Japonica Group]
gi|125535256|gb|EAY81804.1| hypothetical protein OsI_36975 [Oryza sativa Indica Group]
gi|125568785|gb|EAZ10300.1| hypothetical protein OsJ_00135 [Oryza sativa Japonica Group]
Length = 588
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 161/397 (40%), Positives = 207/397 (52%), Gaps = 101/397 (25%)
Query: 6 FEFEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLAETMQD 65
+E EK RLL LA + GF++D A L+R++ LYG+ GQ FI+VE+CGDDF+ LA+ +
Sbjct: 4 YEREKKRLLDLAADSGFERDLAADCLDRIVRLYGEGGQGFITVENCGDDFLGALADATNN 63
Query: 66 SEEWDDLQAMESEACGALNNMFDKRVIDNNQANDNDNSREYIDILDDSPEPKRRPTLMEL 125
+++WDDL A+E+EACG LN M VID D E L E R T + L
Sbjct: 64 NDDWDDLNAIENEACGNLNGMMKHGVID-------DKEVEVRTPLFRQAESSARQTRINL 116
Query: 126 DSLSDTEDLDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVSTSSASSV 185
DS + D DF + C VST +
Sbjct: 117 DSFGFSSDDDF------------------------------ETLESHCDRSVSTQKKVNR 146
Query: 186 SNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFV 245
N + S S + TLS+++L +LDD+ FANVVIFGN++FRPLQ++AC+A+V+ D FV
Sbjct: 147 GNNRCESSTSTSNRETLSYQQLYSLDDINFANVVIFGNKSFRPLQYEACRAAVSNMDTFV 206
Query: 246 LLPTGGGKSLCYQ---------------------DQIITLNLKFGIPATFLNSQQTVSQA 284
L+PTGGGKSLCYQ DQI+ LN KF IPA FLNSQQT SQ+
Sbjct: 207 LMPTGGGKSLCYQLPATLHPGVTVVVCPLLSLIEDQIVALNFKFAIPAAFLNSQQTPSQS 266
Query: 285 AAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCL 344
+AV+QELR G KPS KLLYVTPER+ GN SF +L L
Sbjct: 267 SAVIQELRSG-----------------------KPSFKLLYVTPERMAGNSSFIGILIGL 303
Query: 345 HRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
H++G LA FV+DEAHCV
Sbjct: 304 HQRG--------------------LLARFVIDEAHCV 320
>gi|302782143|ref|XP_002972845.1| hypothetical protein SELMODRAFT_98462 [Selaginella moellendorffii]
gi|300159446|gb|EFJ26066.1| hypothetical protein SELMODRAFT_98462 [Selaginella moellendorffii]
Length = 602
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 203/409 (49%), Gaps = 108/409 (26%)
Query: 6 FEFEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLAETMQD 65
E E++RL++LAL+ GFD+D N L++LISLYG +G+DF++VEHCGDDF+A LA++ Q
Sbjct: 1 MERERSRLVALALDVGFDRDVVNACLDQLISLYGYEGRDFVTVEHCGDDFLARLADSTQA 60
Query: 66 SEEWDDLQAMESEACGALNNMFDKRVIDNNQANDNDNSREYIDILDDSPEPKRRPT-LME 124
E+W+ + + G + V+ +++ + +NS D+ S E + ++E
Sbjct: 61 HEDWETSSPLAASEDGDDAFELKENVVADSENEEVENSM-VRDVSSSSAEEEDDDVIIIE 119
Query: 125 LDSLSDTEDLDFTIPKQKDAILNLSSCP----------DGR-SQIFTPSSVKHSSKSVDC 173
D + + P +K ++ + P DGR S ++PS
Sbjct: 120 ADEATPIK------PNEKKSLAQKNHPPSTAGSVTKKLDGRISSFYSPS----------- 162
Query: 174 KSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQA 233
G TSS +S + + ++E L+ LDD + AN IF + FRP Q
Sbjct: 163 -PGTPTSSENSATRRP-------------TYEHLRLLDDFDLANTGIFYHNKFRPFQRMG 208
Query: 234 CKASVAKQDCFVLLPTGGGKSLCY---------------------QDQIITLNLKFGIPA 272
C+A++A +D F+LLPTGGGKSLCY QDQ++ L KF IPA
Sbjct: 209 CEAAMAGKDLFILLPTGGGKSLCYQLPAVMSPGVTVVVSPLLSLIQDQVLALVEKFRIPA 268
Query: 273 TFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIV 332
FL+SQ + SQAAAV+QEL RK +PSCKLLYVTPE++
Sbjct: 269 AFLSSQLSSSQAAAVMQEL-----------------------RKQRPSCKLLYVTPEKLA 305
Query: 333 GNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ SF +VL L R R LA FV+DEAHCV
Sbjct: 306 KSASFQDVLHGLDR--------------------HRLLARFVIDEAHCV 334
>gi|302805332|ref|XP_002984417.1| hypothetical protein SELMODRAFT_234552 [Selaginella moellendorffii]
gi|300147805|gb|EFJ14467.1| hypothetical protein SELMODRAFT_234552 [Selaginella moellendorffii]
Length = 605
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 197/397 (49%), Gaps = 82/397 (20%)
Query: 6 FEFEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLAETMQD 65
E E++RL++LAL+ GFD+D AN L++LISLYG +G+DF++VEHCGDDF+A LA++ Q
Sbjct: 1 MERERSRLIALALDVGFDRDVANAVLDQLISLYGYEGRDFVTVEHCGDDFLARLADSTQA 60
Query: 66 SEEWDDLQAMESEACGALNNMFDKRVIDNNQANDNDNSREYIDILDDSPEPKRRPTLMEL 125
E+W+ + + G + V+ +++ + +NS S + ++E
Sbjct: 61 HEDWETSSPLAAPEDGDDAFELKENVVADSENEEVENSMVRDVSSSSSEDEDDDVIIIEA 120
Query: 126 DSLSDTEDLDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVSTSSASSV 185
D + + + KQ A N PS+ + K+ +S+ + S
Sbjct: 121 DEETPIKPNE----KQSSARKN-----------HPPSTAGSAKKAKKLDGRISSFYSPSP 165
Query: 186 SNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFV 245
S D+ ++E L+ LDD + AN IF + FRP Q C+A++A +D F+
Sbjct: 166 GT---PSSSEDSATRRPTYEHLRLLDDFDLANTAIFYHNKFRPFQRMGCEAAMAGKDLFI 222
Query: 246 LLPTGGGKSLCY---------------------QDQIITLNLKFGIPATFLNSQQTVSQA 284
LLPTGGGKSLCY QDQ++ L KF IPA FL+SQ + SQA
Sbjct: 223 LLPTGGGKSLCYQLPAVMSPGVTVVVSPLLSLIQDQVLALVEKFRIPAAFLSSQLSSSQA 282
Query: 285 AAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCL 344
AAV+QEL RK +PSCKLLYVTPE++ + SF +VL L
Sbjct: 283 AAVMQEL-----------------------RKQRPSCKLLYVTPEKLAKSASFQDVLHGL 319
Query: 345 HRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
R R LA FV+DEAHCV
Sbjct: 320 DR--------------------HRLLARFVIDEAHCV 336
>gi|308803687|ref|XP_003079156.1| putative DNA helicase (ISS) [Ostreococcus tauri]
gi|116057611|emb|CAL53814.1| putative DNA helicase (ISS) [Ostreococcus tauri]
Length = 445
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 93/193 (48%), Gaps = 64/193 (33%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------ 257
+DD + ANV+IF N +FR Q + C+ SV +DCFVL+PTGGGKSLCY
Sbjct: 187 MDDFDLANVMIFKNGSFRHCQREVCEQSVLGKDCFVLMPTGGGKSLCYMLPAALQGGVTV 246
Query: 258 ---------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
QDQ+ L F IPATFL+S Q+ A AVL+EL
Sbjct: 247 VCSPLLSLIQDQVSHLVKDFQIPATFLSSAQSQGDAVAVLREL----------------- 289
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
RK KP+ +LLYVTPE++ + + +++L L G
Sbjct: 290 ------RKRKPTIRLLYVTPEKLASSATLADILHQLDSNG-------------------- 323
Query: 369 QLAGFVVDEAHCV 381
L FV+DEAHCV
Sbjct: 324 MLTRFVIDEAHCV 336
>gi|307107282|gb|EFN55525.1| hypothetical protein CHLNCDRAFT_133956 [Chlorella variabilis]
Length = 817
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 94/197 (47%), Gaps = 66/197 (33%)
Query: 208 QALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------- 257
Q LD +++AN+ +FGN +FR Q Q +A+++ +DCFVL+PTGGGKSL Y
Sbjct: 270 QHLDLLDYANLKVFGNSSFRSEQRQIIEAALSGRDCFVLMPTGGGKSLTYQLPAVLTPGV 329
Query: 258 -----------QDQIITLNL--KFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLH 304
QDQ+ L L G+P T+L+SQQTV++ AV EL
Sbjct: 330 TVVVTPLLSLMQDQVQALTLLPSGGVPTTYLSSQQTVAETRAVFLEL------------- 376
Query: 305 QLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPH 364
K +P+ KLLYVTPE++V + L+ LH G
Sbjct: 377 ----------GKARPTIKLLYVTPEQLVRGERLKGALRALHSHGL--------------- 411
Query: 365 TCQRQLAGFVVDEAHCV 381
LA VVDEAHCV
Sbjct: 412 -----LARLVVDEAHCV 423
>gi|384247288|gb|EIE20775.1| ATP-dependent DNA helicase [Coccomyxa subellipsoidea C-169]
Length = 455
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 93/195 (47%), Gaps = 66/195 (33%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------ 257
+D ++F N+ +FGN AFR Q + + + +D FVL+PTGGGKSLCY
Sbjct: 1 MDLLDFVNLKVFGNSAFREQQRRVIETVLKDRDAFVLMPTGGGKSLCYQLPAVISRGLTV 60
Query: 258 ---------QDQIITL--NLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
QDQ+ L G+PAT+LNSQQT + AV EL
Sbjct: 61 VISPLLSLMQDQVRALVTTASGGVPATYLNSQQTEREKRAVFSEL--------------- 105
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
+K++P+ KLLY+TPE++V + + + L+ L R+G
Sbjct: 106 --------QKEQPTVKLLYITPEQLVASAALASTLESLQRRG------------------ 139
Query: 367 QRQLAGFVVDEAHCV 381
LA FVVDEAHCV
Sbjct: 140 --LLARFVVDEAHCV 152
>gi|145346893|ref|XP_001417916.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578144|gb|ABO96209.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 87/184 (47%), Gaps = 64/184 (34%)
Query: 219 VIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------------------- 257
+IF N +FR Q + C+ SV +DCFVL+PTGGGKSLCY
Sbjct: 1 MIFKNASFRHCQREICEQSVRGEDCFVLMPTGGGKSLCYMLPAILQGGVTIVCSPLLSLI 60
Query: 258 QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD 317
QDQ+ L F IPATFL+S Q+ A AVL+EL RK
Sbjct: 61 QDQVSHLVKDFNIPATFLSSAQSQGDAVAVLREL-----------------------RKR 97
Query: 318 KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDE 377
KP+ +LLYVTPE++ + + ++++ L R G L FV+DE
Sbjct: 98 KPTIRLLYVTPEKLASSSTLADIMDQLDRNG--------------------LLTRFVIDE 137
Query: 378 AHCV 381
AHCV
Sbjct: 138 AHCV 141
>gi|412989281|emb|CCO15872.1| predicted protein [Bathycoccus prasinos]
Length = 857
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 85/192 (44%), Gaps = 64/192 (33%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------- 257
D ++ AN IFGN +FRP Q + C+A VA +D FVL+PTGGGK+LCY
Sbjct: 349 DMLDAANYYIFGNESFRPNQREICEACVANEDVFVLMPTGGGKTLCYALPAVCSEGVTIV 408
Query: 258 --------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
QDQ+ L +F IP+ L + +VL+EL
Sbjct: 409 FSPLVSLVQDQVKKLVYEFDIPSVALLGSAGEGETKSVLREL------------------ 450
Query: 310 LTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
K+ P+ KLLYVTPE+ + S + L KG +
Sbjct: 451 -----YKENPTIKLLYVTPEKFQASPSLRNAFQSLFEKG--------------------K 485
Query: 370 LAGFVVDEAHCV 381
LA FVVDEAHCV
Sbjct: 486 LARFVVDEAHCV 497
>gi|303286391|ref|XP_003062485.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456002|gb|EEH53304.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 491
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 87/196 (44%), Gaps = 70/196 (35%)
Query: 213 MEFANVVIFGNRAFRPLQHQACKASV------AKQDCFVLLPTGGGKSLCY--------- 257
M+ N +FGN AFR Q ++ A +DCFVL+PTGGGKSLCY
Sbjct: 1 MDLCNKEVFGNEAFRSPQFSVASHAIRGGRGYAGRDCFVLMPTGGGKSLCYQLPAIITGG 60
Query: 258 ------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQ 305
QDQ+ L + +PAT+L+S QT + A A EL
Sbjct: 61 VTVVCSPLLSLIQDQVRHLVHDYDVPATYLSSAQTETDARAAFAEL-------------- 106
Query: 306 LIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
RKDKP+ +LLYVTPE++ + + L+ L+ G
Sbjct: 107 ---------RKDKPTIRLLYVTPEKLASSDALWTCLEALYDSG----------------- 140
Query: 366 CQRQLAGFVVDEAHCV 381
QLA FV+DEAHCV
Sbjct: 141 ---QLARFVIDEAHCV 153
>gi|325187369|emb|CCA21907.1| bloom syndrome protein putative [Albugo laibachii Nc14]
Length = 590
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 98/213 (46%), Gaps = 67/213 (31%)
Query: 193 LISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGG 252
++S + S E ++ D + AN +IFGN +FR +Q +A++A++DCFVL+PTGGG
Sbjct: 136 MVSPVRQLSKSLEIAESSDRYDRANALIFGNASFRTIQRSVIEATMAQKDCFVLMPTGGG 195
Query: 253 KSLCY---------------------QDQIITL--NLKFGIPATFLNSQQTVSQAAAVLQ 289
KSLCY QDQ+ L N GIP +L+SQ ++ +
Sbjct: 196 KSLCYQLPAVLSQGVTIVVSPLLSLIQDQVTQLIQNPSAGIPTAYLSSQTGIALKKTIYA 255
Query: 290 ELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQS-FSEVLKCLHRKG 348
EL ++ +PS KLLYVT ERI + F +L LH+K
Sbjct: 256 EL-----------------------KRPRPSIKLLYVTAERIGSVAADFMSLLHDLHQK- 291
Query: 349 SIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ LA FV+DEAHC+
Sbjct: 292 -------------------KMLARFVIDEAHCI 305
>gi|345495259|ref|XP_001605753.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1426
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 114/261 (43%), Gaps = 72/261 (27%)
Query: 146 LNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVSTSSASSVSNKKRSSLISDNEHGTLS-- 203
+N+ S PD + S+ SS+ S S + + S SN + I + ++ +S
Sbjct: 598 INMISEPD---YGYVQSNCNTSSQKFSQNSTNSKTESKSNSNDVVAQFIGNFKNDGVSGE 654
Query: 204 FEELQALDDMEFANVV--IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--- 258
F+ ++ E NV FG +FRP Q QA A++ DCF+L+PTGGGKSLCYQ
Sbjct: 655 FDSMKYPHSREMMNVFRQKFGLYSFRPNQLQAINAAICGYDCFILMPTGGGKSLCYQLPA 714
Query: 259 ------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQH 300
DQ+ L + I A L+S T QA +V +EL
Sbjct: 715 LLTPGVTIVVSPLKSLIIDQVQKL-ISLDISAAHLSSSVTDEQAQSVYREL--------- 764
Query: 301 YFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVV 360
K +PS KLLY+TPE+I +Q + L+ L+ +G
Sbjct: 765 --------------AKKEPSLKLLYLTPEKISASQKIGDALRALYERG------------ 798
Query: 361 VLPHTCQRQLAGFVVDEAHCV 381
LA FV+DEAHCV
Sbjct: 799 --------MLARFVIDEAHCV 811
>gi|350417151|ref|XP_003491281.1| PREDICTED: Bloom syndrome protein homolog [Bombus impatiens]
Length = 1344
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 81/182 (44%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q QA A++ DCFVL+PTGGGKSLCYQ D
Sbjct: 636 FGLYSFRPNQLQAINAAILGFDCFVLMPTGGGKSLCYQLPALLLPGVTIVISPLKSLILD 695
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPA ++ T SQA+ + +EL K +P
Sbjct: 696 QVQKLT-SLDIPAAHMSGGITDSQASGIYREL-----------------------SKKEP 731
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
S KLLYVTPE+I +Q F +L L+ +G LA FV+DEAH
Sbjct: 732 SLKLLYVTPEKISASQKFCNLLTTLYERG--------------------LLARFVIDEAH 771
Query: 380 CV 381
CV
Sbjct: 772 CV 773
>gi|302830616|ref|XP_002946874.1| hypothetical protein VOLCADRAFT_103112 [Volvox carteri f.
nagariensis]
gi|300267918|gb|EFJ52100.1| hypothetical protein VOLCADRAFT_103112 [Volvox carteri f.
nagariensis]
Length = 735
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 86/175 (49%), Gaps = 44/175 (25%)
Query: 207 LQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNL 266
L+ + + +FGN FRP Q + K++++ +D FVL+PTGGGKSLCYQ +
Sbjct: 129 LRLANKWVWGKWRVFGNEGFRPNQMEVMKSTLSGRDVFVLMPTGGGKSLCYQLPAVVSQG 188
Query: 267 KFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYV 326
+ L S QT +A +VL+EL C K++PSCKLLY+
Sbjct: 189 VTVVVCPLL-SLQTQDEAVSVLREL--------------------C---KERPSCKLLYL 224
Query: 327 TPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
TPE +V ++L LH++G +LA FV+DEAHCV
Sbjct: 225 TPEALVKGTRVKDLLDRLHQRG--------------------RLARFVIDEAHCV 259
>gi|299473691|emb|CBN78084.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 645
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 92/203 (45%), Gaps = 67/203 (33%)
Query: 203 SFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---- 258
++ L+ +DD AN IFGN FR +Q + +A++ +DCFVL+PTGGGKSLCYQ
Sbjct: 201 GYDPLELMDD---ANREIFGNNGFRGVQERVIRATLCGRDCFVLMPTGGGKSLCYQLPAC 257
Query: 259 -----------------DQIITLNLKF---GIPATFLNSQQTVSQAAAVLQELRQGLVLS 298
DQ+ L LK GIPA L S + + ++L +
Sbjct: 258 LSKGVTFVMSPLLSLIEDQVTQL-LKAPCGGIPAAHLTSATPTTAIKQIYKDLGR----- 311
Query: 299 QHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTD 358
A R +PS KLLYVTPER+ + S + + L+ KG
Sbjct: 312 --------------ADRDREPSVKLLYVTPERLGNSDSMLDFMHRLNDKG---------- 347
Query: 359 VVVLPHTCQRQLAGFVVDEAHCV 381
LA FV+DEAHCV
Sbjct: 348 ----------MLARFVIDEAHCV 360
>gi|383859981|ref|XP_003705470.1| PREDICTED: Bloom syndrome protein homolog [Megachile rotundata]
Length = 1362
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 83/182 (45%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q QA A++ DCFVL+PTGGGKSLCYQ D
Sbjct: 637 FGLYSFRPNQLQAINAAMLGFDCFVLMPTGGGKSLCYQLPALLLPGVTIVISPLKSLILD 696
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPA L+ T +QA A+ +EL S+KD P
Sbjct: 697 QVQKLT-SLDIPAAHLSGTITDAQADAIYREL----------------------SKKD-P 732
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ KLLYVTPE+I +Q F +L L+ +G LA FV+DEAH
Sbjct: 733 ALKLLYVTPEKISASQKFCNLLSSLYERG--------------------LLAKFVIDEAH 772
Query: 380 CV 381
CV
Sbjct: 773 CV 774
>gi|328778036|ref|XP_396209.4| PREDICTED: Bloom syndrome protein homolog, partial [Apis mellifera]
Length = 1179
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 82/182 (45%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q QA A++ DCF+L+PTGGGKSLCYQ D
Sbjct: 610 FGLYSFRPNQLQAINAAILGFDCFILMPTGGGKSLCYQLPALLLPGVTIVISPLKSLILD 669
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT ++ T SQA + +EL S+KD P
Sbjct: 670 QVQKLT-SLDIPATHMSGGITDSQALGIYREL----------------------SKKD-P 705
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ KLLYVTPE+I + F +L L+ + R LA FV+DEAH
Sbjct: 706 ALKLLYVTPEKISASPKFCNILSSLYNR--------------------RLLARFVIDEAH 745
Query: 380 CV 381
CV
Sbjct: 746 CV 747
>gi|380011350|ref|XP_003689771.1| PREDICTED: Bloom syndrome protein homolog [Apis florea]
Length = 1167
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 82/182 (45%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q QA A++ DCF+L+PTGGGKSLCYQ D
Sbjct: 481 FGLYSFRPNQLQAINAAILGFDCFILMPTGGGKSLCYQLPALLLPGVTIVISPLKSLILD 540
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT ++ T SQA + +EL S+KD P
Sbjct: 541 QVQKLT-SLDIPATHMSGGITDSQALGIYREL----------------------SKKD-P 576
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ KLLYVTPE+I + F +L L+ + R LA FV+DEAH
Sbjct: 577 ALKLLYVTPEKISASPKFCNILSSLYNR--------------------RLLARFVIDEAH 616
Query: 380 CV 381
CV
Sbjct: 617 CV 618
>gi|159490912|ref|XP_001703417.1| ATP-dependent DNA helicase [Chlamydomonas reinhardtii]
gi|158280341|gb|EDP06099.1| ATP-dependent DNA helicase [Chlamydomonas reinhardtii]
Length = 330
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 71/140 (50%), Gaps = 48/140 (34%)
Query: 247 LPTGGGKSLCYQDQ-----IITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHY 301
+PTGGGKSLCYQ Q + +L G+PATFL+SQQT ++A AV++EL
Sbjct: 1 MPTGGGKSLCYQMQDQVRALCSLRAGGGVPATFLSSQQTAAEAMAVMREL---------- 50
Query: 302 FLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVV 361
RKD+PS KLLY+TPE +V E+L LH +
Sbjct: 51 -------------RKDRPSIKLLYLTPEALVKGGRVKELLDRLHSR-------------- 83
Query: 362 LPHTCQRQLAGFVVDEAHCV 381
+ LA FV+DEAHCV
Sbjct: 84 ------QHLARFVIDEAHCV 97
>gi|357622484|gb|EHJ73945.1| putative blooms syndrome DNA helicase [Danaus plexippus]
Length = 551
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q Q A++ DCFVL+PTGGGKSLCYQ D
Sbjct: 349 FGLTSFRPNQKQVINATLLGHDCFVLMPTGGGKSLCYQLPAILTPGVTIVISPLRSLMLD 408
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L IPA L S T +++ V +L Q +P
Sbjct: 409 QVNKL-LALDIPAAHLGSDVTEAKSNYVYDDLNQ-----------------------QEP 444
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ KLLYVTPE+I + F E L L+ K ++++ FV+DEAH
Sbjct: 445 TIKLLYVTPEKIQSSPKFQETLTRLYEK--------------------QKISRFVIDEAH 484
Query: 380 CV 381
CV
Sbjct: 485 CV 486
>gi|354683879|gb|AER35068.1| ATP-dependent DNA helicase [Dictyostelium lacteum]
Length = 748
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 101/228 (44%), Gaps = 71/228 (31%)
Query: 177 VSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKA 236
+ ++ +S S ++ S+ S NE + FE + + + N ++FGN +FR LQ +A A
Sbjct: 241 IGSNYNNSNSKEEEVSISSGNESYSKQFEWDRVVSE---CNKMVFGNDSFRRLQKEAINA 297
Query: 237 SVAKQDCFVLLPTGGGKSLCY-----------------------QDQIITLNLKFGIPAT 273
++ +D F+ LPTGGGKSLC+ QDQ+ L G+P
Sbjct: 298 ILSNKDTFISLPTGGGKSLCFQLPALIGKDAGVNIVISPLLALMQDQLSKLK-SLGVPVE 356
Query: 274 FLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVG 333
LNSQ ++S+ V QEL + C S KLLYVTPER G
Sbjct: 357 TLNSQLSISERKRVFQELNN----------------INC-------SIKLLYVTPERFSG 393
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ F E+L +H +G QL +VDEAH +
Sbjct: 394 S-DFQEILVNIHDRG--------------------QLKRLIVDEAHSI 420
>gi|307195272|gb|EFN77228.1| Bloom syndrome protein-like protein [Harpegnathos saltator]
Length = 1091
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRP Q QA A++ DCFVL+PTGGGKSLCYQ D
Sbjct: 405 FGLYTFRPNQLQAINATLVGFDCFVLMPTGGGKSLCYQLPALLSTGLTVVISPLKSLILD 464
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + IPA L+S T QA AV +EL C K +P
Sbjct: 465 QVQKL-ISLDIPAAQLSSSVTDKQAEAVYREL--------------------C---KKEP 500
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ K+LYVTPE+I +Q F + L+ + L FV+DEAH
Sbjct: 501 ALKILYVTPEKISASQKFCNTMTTLYERD--------------------LLTRFVIDEAH 540
Query: 380 CV 381
CV
Sbjct: 541 CV 542
>gi|332023927|gb|EGI64145.1| Bloom syndrome protein-like protein [Acromyrmex echinatior]
Length = 1254
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 78/182 (42%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRP Q QA A++ DCF+L+PTGGGKSLCYQ D
Sbjct: 525 FGLYTFRPNQLQAINATLLGFDCFILMPTGGGKSLCYQLPALLNVGLTIVISPLKSLILD 584
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + IPA L+ T +QA A+ +EL K +P
Sbjct: 585 QVQKL-ISLDIPAAHLSGSITDNQAEAIYREL-----------------------SKKEP 620
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ K+LYVTPE+I +Q F L L+ + L FV+DEAH
Sbjct: 621 ALKILYVTPEKISASQKFCNTLTILYER--------------------ELLTRFVIDEAH 660
Query: 380 CV 381
CV
Sbjct: 661 CV 662
>gi|157104176|ref|XP_001648286.1| blooms syndrome DNA helicase [Aedes aegypti]
gi|108880401|gb|EAT44626.1| AAEL004039-PA [Aedes aegypti]
Length = 1406
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 76/172 (44%), Gaps = 45/172 (26%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG ++FRP Q Q A++ DCFVL+PTGGGKSLCYQ +PA N
Sbjct: 669 FGLQSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQ-----------LPALLTNGVTI 717
Query: 281 VSQAAAVL-----QELRQGLVLSQH------YFLHQLIFVLTCASRKDKPSCKLLYVTPE 329
V L +L + + H Y Q I+ + R P KLLYVTPE
Sbjct: 718 VVSPLKSLILDQVNKLSSLDIEAAHLSGNISYAEEQRIYYDLQSPR---PKMKLLYVTPE 774
Query: 330 RIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+I + F VL LH +QLA FV+DEAHCV
Sbjct: 775 KISSSGRFQNVLSGLH--------------------AMKQLARFVIDEAHCV 806
>gi|312373074|gb|EFR20899.1| hypothetical protein AND_18334 [Anopheles darlingi]
Length = 1384
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG R FRP Q Q A++ +DCFVL+PTGGGKSLCYQ D
Sbjct: 599 FGLRTFRPNQLQVINATLLGRDCFVLMPTGGGKSLCYQLPALLTTGVTIVVSPLKSLILD 658
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN IPA L+ + ++ + +L +C P
Sbjct: 659 QVQKLN-TLDIPAGSLSGEAQMADVQRIYDDLYS-----------------SC------P 694
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + F +L LHR+ RQL V+DEAH
Sbjct: 695 VLKLLYVTPEKISSSAKFQNLLSALHRR--------------------RQLGRIVIDEAH 734
Query: 380 CV 381
CV
Sbjct: 735 CV 736
>gi|340383049|ref|XP_003390030.1| PREDICTED: Bloom syndrome protein homolog [Amphimedon
queenslandica]
Length = 1085
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 99/215 (46%), Gaps = 49/215 (22%)
Query: 179 TSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVI---FGNRAFRPLQHQACK 235
T S+S + K S + DN S E + D V FG + FRP Q +A
Sbjct: 410 TVSSSLIKPSKGSETVPDN-----SAEFRGSYDHAPLLRKVFREKFGLQEFRPNQLEAIN 464
Query: 236 ASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQ-TVSQAAAVLQELRQG 294
A+V ++CF+L+PTGGGKSLCYQ +PA L+ VS +++Q+ Q
Sbjct: 465 AAVLGKNCFILMPTGGGKSLCYQ-----------LPALLLDGVTIVVSPLRSLIQDQVQK 513
Query: 295 LV--------LSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHR 346
L LS Y + + V T SR D P KLLYVTPE++ + + L+ L+
Sbjct: 514 LNSLEISACHLSGEYSQSEELRVYTELSRLD-PGIKLLYVTPEKLAASTKLLKTLQSLYS 572
Query: 347 KGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+G I + FV+DEAHC+
Sbjct: 573 RGKI--------------------SRFVIDEAHCI 587
>gi|38345369|emb|CAE03209.2| OSJNBa0088K19.8 [Oryza sativa Japonica Group]
Length = 1164
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 35/173 (20%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITL-NLKFGI 270
++E N +FGNR+FRP Q + A+++ D FVL+PTGGGKSL YQ Q +++ + GI
Sbjct: 424 ELEANNKRVFGNRSFRPNQREIINATMSGNDVFVLMPTGGGKSLTYQSQNVSIFEVGTGI 483
Query: 271 PATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSC--KLLYVTP 328
N + + +AA L + Q L +L+ P+C KLLYVTP
Sbjct: 484 KRVGRNDWRKANISAAYLSASMEW--SEQQEILRELM----------SPTCTYKLLYVTP 531
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E+I + + L+ L+ +G L+ V+DEAHCV
Sbjct: 532 EKIAKSDALLRQLENLYSRG--------------------HLSRIVIDEAHCV 564
>gi|345494123|ref|XP_001606008.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1223
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 78/182 (42%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRP Q QA A++ DCF+L+PTGGGKSLCYQ D
Sbjct: 480 FGLFNFRPNQLQAINAALLGFDCFILMPTGGGKSLCYQLPALLTPGITIVVSPLKSLILD 539
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q L + IPA ++ QT SQ A+ +E+ S+KD P
Sbjct: 540 QTQKL-ISLDIPAAHMSGDQTDSQTDAIYREM----------------------SKKD-P 575
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ +Q L L+ +G L FV+DEAH
Sbjct: 576 VLKLLYVTPEKLSASQKLCNALTALYERG--------------------LLGRFVIDEAH 615
Query: 380 CV 381
CV
Sbjct: 616 CV 617
>gi|426248114|ref|XP_004017810.1| PREDICTED: Bloom syndrome protein [Ovis aries]
Length = 1429
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 103/249 (41%), Gaps = 75/249 (30%)
Query: 163 SVKHSSKSVDCKSGVSTS-------SASSVSNKKRSSLISDNEHGTLSFEELQALDDMEF 215
S + SS DC G ST+ S + +K +L S N F+ L E
Sbjct: 609 SERPSSAKTDCLPGASTTQNKNFSESIPNYPDKMEQNLASRNPKHE-RFQSLNFPHTKEM 667
Query: 216 ANVV--IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------- 258
+ FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ
Sbjct: 668 MKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISP 727
Query: 259 ------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTC 312
DQ+ L IPAT+L +T S+A ++ +L
Sbjct: 728 LRSLIVDQVQKLT-SLDIPATYLTGDKTDSEATSIYLQL--------------------- 765
Query: 313 ASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAG 372
S+KD P KLLYVTPE++ + L+ L+ +G LA
Sbjct: 766 -SKKD-PIIKLLYVTPEKVCASNRLISTLENLYERG--------------------LLAR 803
Query: 373 FVVDEAHCV 381
FV+DEAHCV
Sbjct: 804 FVIDEAHCV 812
>gi|427712781|ref|YP_007061405.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
gi|427376910|gb|AFY60862.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
Length = 732
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 80/182 (43%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG AFRP Q + AS+ +QD +LPTGGGKS+C+Q D
Sbjct: 11 FGYEAFRPGQAEIINASLNQQDVLAILPTGGGKSICFQLPALLKPGVTLVVSPLIALMLD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L K GIPATFLNS ++A A + + G V
Sbjct: 71 QVLALQ-KNGIPATFLNSTLAAAEARARIHSILNGEV----------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER+V + SF+ +L +H+ I A FVVDEAH
Sbjct: 107 --KLLYVAPERLVSD-SFTALLANIHQTVGI--------------------ASFVVDEAH 143
Query: 380 CV 381
CV
Sbjct: 144 CV 145
>gi|328725542|ref|XP_001947924.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 77/179 (43%), Gaps = 59/179 (32%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FRP Q + A++ DCFVL+PTGGGKSLCYQ +PA
Sbjct: 450 FGLHNFRPNQLETINAALLGHDCFVLMPTGGGKSLCYQ-----------LPA-------V 491
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQL------------------IFVLTCASRKDKPSCK 322
+S+ ++ + LV+ Q L L IF C S +P K
Sbjct: 492 ISKGVTLVISPLKSLVIDQTEKLKSLDIPTAHLLGNMKPEEENIIFTKLCMS---EPGLK 548
Query: 323 LLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+LYVTPE+I + ++L LH C+ +LA V+DEAHCV
Sbjct: 549 MLYVTPEKIAASMKLGQILNNLH--------------------CRGKLARLVIDEAHCV 587
>gi|328697674|ref|XP_001952385.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 77/179 (43%), Gaps = 59/179 (32%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FRP Q + A++ DCFVL+PTGGGKSLCYQ +PA
Sbjct: 450 FGLHNFRPNQLETINAALLGHDCFVLMPTGGGKSLCYQ-----------LPA-------V 491
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQL------------------IFVLTCASRKDKPSCK 322
+S+ ++ + LV+ Q L L IF C S +P K
Sbjct: 492 ISKGVTLVISPLKSLVIDQTEKLKSLDIPTAHLLGNMKPEEENIIFTKLCMS---EPGLK 548
Query: 323 LLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+LYVTPE+I + ++L LH C+ +LA V+DEAHCV
Sbjct: 549 MLYVTPEKIAASMKLGQILNNLH--------------------CRGKLARLVIDEAHCV 587
>gi|396484512|ref|XP_003841962.1| hypothetical protein LEMA_P098920.1 [Leptosphaeria maculans JN3]
gi|312218537|emb|CBX98483.1| hypothetical protein LEMA_P098920.1 [Leptosphaeria maculans JN3]
Length = 1753
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 80/195 (41%), Gaps = 66/195 (33%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D+ A V FG R FRP Q +A ++ + CFVL+PTGGGKSLCYQ
Sbjct: 826 DLRNALVRRFGLRGFRPGQLEAINTTLGGEHCFVLMPTGGGKSLCYQLPSVITSGKTRGV 885
Query: 259 ------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
DQ+ +FG+ A +N + T +Q ++ L++
Sbjct: 886 TIVVSPLLSLMEDQVAACEQRFGMQAFLINGESTAAQKNMIMDALKE------------- 932
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
R + ++LYVTPE + NQ L+ LH +G
Sbjct: 933 --------RDPQKFIQILYVTPEMLSKNQRMVGTLQQLHSRG------------------ 966
Query: 367 QRQLAGFVVDEAHCV 381
LA V+DEAHCV
Sbjct: 967 --HLARIVIDEAHCV 979
>gi|326431575|gb|EGD77145.1| RecQ5 [Salpingoeca sp. ATCC 50818]
Length = 1451
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 86/171 (50%), Gaps = 43/171 (25%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
G R FRP Q +AC A++ +DCF+L+PTGGGKSLCYQ +T K G+ TF+
Sbjct: 716 LGLRKFRPNQLEACNAALTGRDCFILMPTGGGKSLCYQLPALT---KKGV--TFV----- 765
Query: 281 VSQAAAVLQE----LRQG------LVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPER 330
+S +++Q+ LRQ L+ +Q I C KD CKL+YVTPER
Sbjct: 766 ISPLISLIQDQVSALRQNNIRALCLLSTQDQKTQSQIHRTLCM--KDV-LCKLIYVTPER 822
Query: 331 IVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
I + + ++ L+ +G L+ FV+DEAHCV
Sbjct: 823 IAASHRLKQTMQNLYTRG--------------------LLSRFVIDEAHCV 853
>gi|291410501|ref|XP_002721547.1| PREDICTED: Bloom syndrome protein [Oryctolagus cuniculus]
Length = 1414
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 107/253 (42%), Gaps = 81/253 (32%)
Query: 162 SSVKHSSKSVDCKSGVSTSSASSVS-------NKKRSSLISDNEHGTLSFEELQALD--- 211
+S + SS C VST+ +S +K SL S G L E Q+L+
Sbjct: 598 ASERISSAKTSCLPMVSTAHRRHISESVQNDADKPAQSLAS----GNLKHERFQSLNFPH 653
Query: 212 --DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ----------- 258
DM FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ
Sbjct: 654 TKDMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACISPGVTI 713
Query: 259 ----------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
DQ+ L IPAT+L +T S+AA++ +L
Sbjct: 714 VISPLRSLIVDQVQKLT-SLDIPATYLTGDKTDSEAASIYLQL----------------- 755
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
S+KD P KLLYVTPE++ + L+ L+ + +
Sbjct: 756 -----SKKD-PIIKLLYVTPEKVCASNRLISTLENLYER--------------------K 789
Query: 369 QLAGFVVDEAHCV 381
LA FV+DEAHCV
Sbjct: 790 LLARFVIDEAHCV 802
>gi|307183296|gb|EFN70165.1| Bloom syndrome protein-like protein [Camponotus floridanus]
Length = 1313
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 76/182 (41%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRP Q QA A++ DCFVL+PTGGGKSLCYQ D
Sbjct: 630 FGLYTFRPNQLQAINATLLGFDCFVLMPTGGGKSLCYQLPALLSVGLTIVISPLKSLILD 689
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPA L+S T +QA AV +EL K +P
Sbjct: 690 QVQKLT-SLDIPAAHLSSSITDNQAEAVYREL-----------------------AKKEP 725
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K+LYVTPE+I + L L+ + LA FV+DEAH
Sbjct: 726 ILKILYVTPEKISASTKLCNTLTILYER--------------------ELLARFVIDEAH 765
Query: 380 CV 381
CV
Sbjct: 766 CV 767
>gi|326514896|dbj|BAJ99809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 763
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 91/209 (43%), Gaps = 74/209 (35%)
Query: 195 SDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKS 254
+ + HGT S +EL+++ FG FR Q +A +A ++ +DCF L+PTGGGKS
Sbjct: 12 AGSRHGTKSPKELESVLKQ------YFGYSEFRGRQLEAIEAVLSGRDCFCLMPTGGGKS 65
Query: 255 LCYQ---------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQ 293
+CYQ +Q+ +L K GIPA FL+S QT + + ++L
Sbjct: 66 MCYQIPALVKTGVVLVISPLIALMENQVSSLKSK-GIPAEFLSSTQTTANKNKIHEDLDS 124
Query: 294 GLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLK 353
G +PS KLLYVTPE +V F L LH +G
Sbjct: 125 G-----------------------RPSLKLLYVTPE-LVATSGFKAKLTKLHNRG----- 155
Query: 354 VLTTDVVVLPHTCQRQLAGFV-VDEAHCV 381
L G V +DEAHC+
Sbjct: 156 ----------------LLGLVAIDEAHCI 168
>gi|290991859|ref|XP_002678552.1| predicted protein [Naegleria gruberi]
gi|284092165|gb|EFC45808.1| predicted protein [Naegleria gruberi]
Length = 424
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 84/187 (44%), Gaps = 69/187 (36%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG +FR LQ +A A+++ +D F+++PTGGGKSLCY
Sbjct: 16 VFGIPSFRTLQLEAINATLSGRDVFIIMPTGGGKSLCYQLPAIIDVGSSGGVTIVISPLL 75
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+++L + IPA FL S+Q + +EL S
Sbjct: 76 SLIQDQVMSL-INLDIPAVFLTSEQDSETTKDIYREL---------------------GS 113
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
R PS +LLYVTPE+I +++F +L+ LH +G + V
Sbjct: 114 R--NPSFRLLYVTPEKISRSETFLNILRRLHERGLFKR--------------------VV 151
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 152 VDEAHCV 158
>gi|149057328|gb|EDM08651.1| Bloom syndrome homolog (human) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149057329|gb|EDM08652.1| Bloom syndrome homolog (human) (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 999
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 81/182 (44%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 654 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 713
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L F IPAT+L +T S+AA + +L S+KD P
Sbjct: 714 QVQKLT-SFDIPATYLTGDKTDSEAANIYLQL----------------------SKKD-P 749
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 750 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 789
Query: 380 CV 381
CV
Sbjct: 790 CV 791
>gi|323453683|gb|EGB09554.1| hypothetical protein AURANDRAFT_2515, partial [Aureococcus
anophagefferens]
Length = 415
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 80/184 (43%), Gaps = 61/184 (33%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG+ +FRP Q +A + ++ +D V+LPTGGGKSLCYQ D
Sbjct: 1 FGHGSFRPGQQRAIRGALHGRDVVVVLPTGGGKSLCYQLPALLTPGVTIVVSPLLSLIED 60
Query: 260 QIITL--NLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD 317
Q+ L GIPA L S + + +VL EL + +
Sbjct: 61 QVSALLGAACGGIPAAHLTSGTKEAASRSVLHELHKA------------------GEGRG 102
Query: 318 KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDE 377
+ KLLYVTPER+ + +F E L LHR+ R LA FVVDE
Sbjct: 103 ELGLKLLYVTPERLAASPTFGECLAKLHRR--------------------RLLARFVVDE 142
Query: 378 AHCV 381
AHCV
Sbjct: 143 AHCV 146
>gi|440913178|gb|ELR62661.1| Bloom syndrome protein [Bos grunniens mutus]
Length = 1430
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 103/249 (41%), Gaps = 75/249 (30%)
Query: 163 SVKHSSKSVDCKSGVSTS-------SASSVSNKKRSSLISDNEHGTLSFEELQALDDMEF 215
S + SS DC G ST+ S + +K +L S N F+ L E
Sbjct: 610 SERPSSAKTDCLPGASTTQNKNFSESIPNYPDKMEQNLASRNPKHE-RFQSLNFPHTKEM 668
Query: 216 ANVV--IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------- 258
+ FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ
Sbjct: 669 MKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISP 728
Query: 259 ------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTC 312
DQ+ L IPAT+L +T S+A ++ +L
Sbjct: 729 LRSLIVDQVQKLT-SLDIPATYLTGDKTDSEATSIYLQL--------------------- 766
Query: 313 ASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAG 372
S+KD P KLLYVTPE++ + L+ L+ + + LA
Sbjct: 767 -SKKD-PIIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLAR 804
Query: 373 FVVDEAHCV 381
FV+DEAHCV
Sbjct: 805 FVIDEAHCV 813
>gi|443726019|gb|ELU13361.1| hypothetical protein CAPTEDRAFT_91032 [Capitella teleta]
Length = 579
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 80/183 (43%), Gaps = 65/183 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
IFG FR Q QA A++ DCF+L+PTGGGKSLCY Q
Sbjct: 8 IFGLNEFRHNQLQAVNAALLGHDCFILMPTGGGKSLCYQLPALVTPGVTLVISPLRSLIQ 67
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L +PAT L+S + +QA LHQ I
Sbjct: 68 DQVQRL-CSLDVPATHLSSDVSPAQANQTFM------------LLHQKI----------- 103
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
P KLLY+TPE+IV + + VL+ L+R+ + LA F++DEA
Sbjct: 104 PPVKLLYLTPEKIVASAKLNSVLENLYRR--------------------KMLARFIIDEA 143
Query: 379 HCV 381
HCV
Sbjct: 144 HCV 146
>gi|348580071|ref|XP_003475802.1| PREDICTED: Bloom syndrome protein-like [Cavia porcellus]
Length = 1405
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 82/182 (45%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 650 FGLHNFRTNQLEAINATLLGEDCFILMPTGGGKSLCYQLPACVLPGVTIVISPLRSLIVD 709
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+AA++ +L S+KD P
Sbjct: 710 QVQKLT-SLDIPATYLTGDKTDSEAASIYLQL----------------------SKKD-P 745
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + +L+ L+ + + LA FV+DEAH
Sbjct: 746 IIKLLYVTPEKVCASNRLISILENLYER--------------------KLLARFVIDEAH 785
Query: 380 CV 381
CV
Sbjct: 786 CV 787
>gi|119913638|ref|XP_613809.3| PREDICTED: Bloom syndrome protein [Bos taurus]
Length = 1430
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 103/249 (41%), Gaps = 75/249 (30%)
Query: 163 SVKHSSKSVDCKSGVSTS-------SASSVSNKKRSSLISDNEHGTLSFEELQALDDMEF 215
S + SS DC G ST+ S + +K +L S N F+ L E
Sbjct: 610 SERPSSAKTDCLPGASTTQNKNFSESIPNYPDKMEQNLASRNPKHE-RFQSLNFPHTKEM 668
Query: 216 ANVV--IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------- 258
+ FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ
Sbjct: 669 MKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISP 728
Query: 259 ------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTC 312
DQ+ L IPAT+L +T S+A ++ +L
Sbjct: 729 LRSLIVDQVQKLT-SLDIPATYLTGDKTDSEATSIYLQL--------------------- 766
Query: 313 ASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAG 372
S+KD P KLLYVTPE++ + L+ L+ + + LA
Sbjct: 767 -SKKD-PIIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLAR 804
Query: 373 FVVDEAHCV 381
FV+DEAHCV
Sbjct: 805 FVIDEAHCV 813
>gi|297487976|ref|XP_002696629.1| PREDICTED: Bloom syndrome protein [Bos taurus]
gi|296475516|tpg|DAA17631.1| TPA: Bloom syndrome, RecQ helicase-like [Bos taurus]
Length = 1430
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 103/249 (41%), Gaps = 75/249 (30%)
Query: 163 SVKHSSKSVDCKSGVSTS-------SASSVSNKKRSSLISDNEHGTLSFEELQALDDMEF 215
S + SS DC G ST+ S + +K +L S N F+ L E
Sbjct: 610 SERPSSAKTDCLPGASTTQNKNFSESIPNYPDKMEQNLASRNPKHE-RFQSLNFPHTKEM 668
Query: 216 ANVV--IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------- 258
+ FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ
Sbjct: 669 MKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISP 728
Query: 259 ------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTC 312
DQ+ L IPAT+L +T S+A ++ +L
Sbjct: 729 LRSLIVDQVQKLT-SLDIPATYLTGDKTDSEATSIYLQL--------------------- 766
Query: 313 ASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAG 372
S+KD P KLLYVTPE++ + L+ L+ + + LA
Sbjct: 767 -SKKD-PIIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLAR 804
Query: 373 FVVDEAHCV 381
FV+DEAHCV
Sbjct: 805 FVIDEAHCV 813
>gi|354504169|ref|XP_003514150.1| PREDICTED: Bloom syndrome protein homolog, partial [Cricetulus
griseus]
Length = 950
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 81/182 (44%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 659 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 718
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L F IPAT+L +T S+AA + +L S+KD P
Sbjct: 719 QVQKLT-SFDIPATYLTGDKTDSEAANIYLQL----------------------SKKD-P 754
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 755 IIKLLYVTPEKVCASNRLISTLENLYDR--------------------KLLARFVIDEAH 794
Query: 380 CV 381
CV
Sbjct: 795 CV 796
>gi|226693393|ref|NP_031576.4| Bloom syndrome protein homolog isoform 1 [Mus musculus]
Length = 1419
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 81/182 (44%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 674 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 733
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L F IPAT+L +T S+AA + +L S+KD P
Sbjct: 734 QVQKLT-SFDIPATYLTGDKTDSEAANIYLQL----------------------SKKD-P 769
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 770 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 809
Query: 380 CV 381
CV
Sbjct: 810 CV 811
>gi|110225360|ref|NP_001035992.1| Bloom syndrome protein homolog isoform 2 [Mus musculus]
gi|5921178|sp|O88700.1|BLM_MOUSE RecName: Full=Bloom syndrome protein homolog; Short=mBLM; AltName:
Full=RecQ helicase homolog
gi|3452495|emb|CAB10933.1| BLM protein [Mus musculus]
gi|162318414|gb|AAI57096.1| Bloom syndrome homolog (human) [synthetic construct]
Length = 1416
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 81/182 (44%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 671 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 730
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L F IPAT+L +T S+AA + +L S+KD P
Sbjct: 731 QVQKLT-SFDIPATYLTGDKTDSEAANIYLQL----------------------SKKD-P 766
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 767 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 806
Query: 380 CV 381
CV
Sbjct: 807 CV 808
>gi|148675035|gb|EDL06982.1| Bloom syndrome homolog (human), isoform CRA_a [Mus musculus]
Length = 1420
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 81/182 (44%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 675 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 734
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L F IPAT+L +T S+AA + +L S+KD P
Sbjct: 735 QVQKLT-SFDIPATYLTGDKTDSEAANIYLQL----------------------SKKD-P 770
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 771 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 810
Query: 380 CV 381
CV
Sbjct: 811 CV 812
>gi|148675036|gb|EDL06983.1| Bloom syndrome homolog (human), isoform CRA_b [Mus musculus]
Length = 1417
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 81/182 (44%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 672 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 731
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L F IPAT+L +T S+AA + +L S+KD P
Sbjct: 732 QVQKLT-SFDIPATYLTGDKTDSEAANIYLQL----------------------SKKD-P 767
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 768 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 807
Query: 380 CV 381
CV
Sbjct: 808 CV 809
>gi|170042287|ref|XP_001848863.1| ATP-dependent DNA helicase hus2 [Culex quinquefasciatus]
gi|167865792|gb|EDS29175.1| ATP-dependent DNA helicase hus2 [Culex quinquefasciatus]
Length = 1437
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 80/168 (47%), Gaps = 37/168 (22%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-PATFL--- 275
FG R+FRP Q Q A++ DCFVL+PTGGGKSLCYQ I+T + + P L
Sbjct: 692 FGLRSFRPNQLQVINATLLGHDCFVLMPTGGGKSLCYQLPAIMTEGVTIVVSPLKSLIHD 751
Query: 276 --NSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVG 333
N ++ AA L G V Y Q I+ + KP KLLYVTPE+I
Sbjct: 752 QVNKLGSLDIPAAHL----SGEV---SYADQQKIYADLSSP---KPVLKLLYVTPEKISS 801
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ F +L L+R +QL FV+DEAHCV
Sbjct: 802 SGRFQNILTELYR--------------------MKQLGRFVIDEAHCV 829
>gi|392337763|ref|XP_003753349.1| PREDICTED: Bloom syndrome protein homolog [Rattus norvegicus]
Length = 1401
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 81/182 (44%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 654 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 713
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L F IPAT+L +T S+AA + +L S+KD P
Sbjct: 714 QVQKLT-SFDIPATYLTGDKTDSEAANIYLQL----------------------SKKD-P 749
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 750 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 789
Query: 380 CV 381
CV
Sbjct: 790 CV 791
>gi|3370996|dbj|BAA32001.1| mBlm [Mus musculus]
Length = 1416
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 81/182 (44%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 671 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 730
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L F IPAT+L +T S+AA + +L S+KD P
Sbjct: 731 QVQKLT-SFDIPATYLTGDKTDSEAANIYLQL----------------------SKKD-P 766
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 767 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 806
Query: 380 CV 381
CV
Sbjct: 807 CV 808
>gi|392344358|ref|XP_003748936.1| PREDICTED: Bloom syndrome protein homolog [Rattus norvegicus]
Length = 1401
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 81/182 (44%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 654 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 713
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L F IPAT+L +T S+AA + +L S+KD P
Sbjct: 714 QVQKLT-SFDIPATYLTGDKTDSEAANIYLQL----------------------SKKD-P 749
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 750 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 789
Query: 380 CV 381
CV
Sbjct: 790 CV 791
>gi|351700321|gb|EHB03240.1| Bloom syndrome protein [Heterocephalus glaber]
Length = 842
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 81/182 (44%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 653 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 712
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+AA++ +L S+KD P
Sbjct: 713 QVQKLT-SLDIPATYLTGDKTDSEAASIYLQL----------------------SKKD-P 748
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 749 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 788
Query: 380 CV 381
CV
Sbjct: 789 CV 790
>gi|169618104|ref|XP_001802466.1| hypothetical protein SNOG_12240 [Phaeosphaeria nodorum SN15]
gi|160703551|gb|EAT80652.2| hypothetical protein SNOG_12240 [Phaeosphaeria nodorum SN15]
Length = 1681
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 77/186 (41%), Gaps = 66/186 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------- 258
FG R FRP Q A A++ + CFVL+PTGGGKSLCYQ
Sbjct: 769 FGLRGFRPGQLDAINATLGGEHCFVLMPTGGGKSLCYQLPAVITSGKTQGVTIVVSPLLS 828
Query: 259 ---DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
DQ+ + +F + A +N + T +Q +++ LR+ R
Sbjct: 829 LMEDQVTSAMERFNVQAFLINGESTQAQKTHIMEGLRE---------------------R 867
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
+ +LLYVTPE + NQ + LH +R+LA V+
Sbjct: 868 DPQKFMQLLYVTPEMLSKNQRMISAFQQLH--------------------SRRRLARIVI 907
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 908 DEAHCV 913
>gi|357137820|ref|XP_003570497.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Brachypodium
distachyon]
Length = 777
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 92/212 (43%), Gaps = 78/212 (36%)
Query: 194 ISDNEHGTLSFEELQALDDMEFANVV--IFGNRAFRPLQHQACKASVAKQDCFVLLPTGG 251
++ + HGT+S +EL+ NV+ FG FR Q +A +A ++ +DCF L+PTGG
Sbjct: 11 LAGSRHGTISPKELE--------NVLKQYFGYSGFRGRQLEAIEAVLSGRDCFCLMPTGG 62
Query: 252 GKSLCYQ---------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQE 290
GKS+CYQ +Q+ +L K G+PA FL+S QT + ++
Sbjct: 63 GKSMCYQIPALVKAGIVLVISPLIALMENQVTSLKSK-GVPAEFLSSTQTAKNKNEIYED 121
Query: 291 LRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSI 350
L G PS KLLYVTPE +V F L L+ +G
Sbjct: 122 LDSG-----------------------NPSLKLLYVTPE-LVATFGFKAKLTKLYSRG-- 155
Query: 351 RLKVLTTDVVVLPHTCQRQLAGFV-VDEAHCV 381
L G V +DEAHC+
Sbjct: 156 -------------------LLGLVAIDEAHCI 168
>gi|242066738|ref|XP_002454658.1| hypothetical protein SORBIDRAFT_04g035010 [Sorghum bicolor]
gi|241934489|gb|EES07634.1| hypothetical protein SORBIDRAFT_04g035010 [Sorghum bicolor]
Length = 714
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 84/185 (45%), Gaps = 52/185 (28%)
Query: 203 SFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---- 258
S E +A ++E FG FR Q +A +A ++ +DCF L+PTGGGKS+CYQ
Sbjct: 11 SGREKKAPKELESVLNQYFGYSGFRGKQLEAIEAVLSGRDCFCLMPTGGGKSMCYQVPAL 70
Query: 259 -DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD 317
+Q+ +L K GIPA FL+S Q + ++L G
Sbjct: 71 ENQVASLKNK-GIPAEFLSSTQASHTKQRIHEDLDTG----------------------- 106
Query: 318 KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV-VD 376
PS KLLYVTPE +V F LK L+ +G L G V +D
Sbjct: 107 NPSLKLLYVTPE-LVATSGFMAKLKKLYNRG---------------------LLGLVAID 144
Query: 377 EAHCV 381
EAHC+
Sbjct: 145 EAHCI 149
>gi|319957274|ref|YP_004168537.1| ATP-dependent DNA helicase recq [Nitratifractor salsuginis DSM
16511]
gi|319419678|gb|ADV46788.1| ATP-dependent DNA helicase RecQ [Nitratifractor salsuginis DSM
16511]
Length = 594
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 78/182 (42%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG++ FRPLQ +A A ++++D ++LPTGGGKSLCYQ D
Sbjct: 11 FGHQGFRPLQEEAVDAILSRRDLLMILPTGGGKSLCYQLPTLMMPGVTIVVSPLLALMHD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L+ GIPA L S Q+ + ++ LR+G
Sbjct: 71 QVTAL-LEMGIPAAMLGSMQSFEEQQETVRRLRRG------------------------- 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER+ N FS++L L + FV+DEAH
Sbjct: 105 ELKLLYVAPERL-NNDFFSQLLSTL------------------------PINFFVIDEAH 139
Query: 380 CV 381
CV
Sbjct: 140 CV 141
>gi|222628902|gb|EEE61034.1| hypothetical protein OsJ_14872 [Oryza sativa Japonica Group]
Length = 2486
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 85/193 (44%), Gaps = 69/193 (35%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------- 257
++E N +FGNR+FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 1731 ELEANNKRVFGNRSFRPNQREIINATMSGNDVFVLMPTGGGKSLTYQLPALICNGVTLVV 1790
Query: 258 -------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
QDQI+ L L+ I A +L++ S+ +L+EL
Sbjct: 1791 SPLVSLIQDQIMHL-LQANISAAYLSASMEWSEQQEILRELMS----------------- 1832
Query: 311 TCASRKDKPSC--KLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
P+C KLLYVTPE+I + + L+ L+ +G
Sbjct: 1833 --------PTCTYKLLYVTPEKIAKSDALLRQLENLYSRG-------------------- 1864
Query: 369 QLAGFVVDEAHCV 381
L+ V+DEAHCV
Sbjct: 1865 HLSRIVIDEAHCV 1877
>gi|301096912|ref|XP_002897552.1| bloom syndrome protein, DEAD/DEAH box helicase [Phytophthora
infestans T30-4]
gi|262107012|gb|EEY65064.1| bloom syndrome protein, DEAD/DEAH box helicase [Phytophthora
infestans T30-4]
Length = 400
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 73/164 (44%), Gaps = 66/164 (40%)
Query: 241 QDCFVLLPTGGGKSLCY---------------------QDQIITL--NLKFGIPATFLNS 277
+DCFVL+PTGGGKSLCY QDQ+ L N GIPA FL S
Sbjct: 4 EDCFVLMPTGGGKSLCYQLPAVLSKGVTIVVSPLLSLIQDQVTALIQNPGCGIPAAFLTS 63
Query: 278 QQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSF 337
Q +++ ++ EL ++ PS KLLY+TPE+I+ +
Sbjct: 64 QTSLTLKRSITAEL-----------------------KRSAPSVKLLYLTPEKIIKSPEM 100
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
++LK LHR + LA FV+DEAHCV
Sbjct: 101 MDLLKDLHR--------------------NKMLARFVIDEAHCV 124
>gi|302799268|ref|XP_002981393.1| hypothetical protein SELMODRAFT_10144 [Selaginella moellendorffii]
gi|300150933|gb|EFJ17581.1| hypothetical protein SELMODRAFT_10144 [Selaginella moellendorffii]
Length = 703
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 85/176 (48%), Gaps = 35/176 (19%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQII-----TLNL 266
D++ N FGN++FRP QH+ A+++ D FVL+PTGGGKSL YQ I TL +
Sbjct: 23 DLKANNRRYFGNKSFRPNQHEIINATMSGHDVFVLMPTGGGKSLTYQLPAICCPGVTL-V 81
Query: 267 KFGIPATFLNSQQTVSQAAAVLQELRQGLVL-SQHYFLHQLIFVLTCASRKDKPSCKLLY 325
+ + ++ +SQA+ + L L Q L QL F D +LLY
Sbjct: 82 VCPLVSLIMDQIMHLSQASIRAEHLSSNLEYEEQRQILQQLNF--------DHCEYRLLY 133
Query: 326 VTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
VTPE+I + + L+ LHR+ R LA V+DEAHCV
Sbjct: 134 VTPEKIARSDNLLRNLENLHRR--------------------RLLARIVIDEAHCV 169
>gi|296204062|ref|XP_002749167.1| PREDICTED: Bloom syndrome protein isoform 2 [Callithrix jacchus]
Length = 1415
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 662 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 721
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A + +L S+KD P
Sbjct: 722 QVQKLT-SLDIPATYLTGDKTDSEATNIYLQL----------------------SKKD-P 757
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + L+ L+ + R LA FV+DEAH
Sbjct: 758 IIKLLYVTPEKICASNRLISTLENLYER--------------------RLLARFVIDEAH 797
Query: 380 CV 381
CV
Sbjct: 798 CV 799
>gi|322801995|gb|EFZ22532.1| hypothetical protein SINV_04660 [Solenopsis invicta]
Length = 1148
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 76/182 (41%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRP Q QA A++ DCF+L+PTGGGKSLCYQ D
Sbjct: 516 FGLYTFRPNQLQAINATLLGFDCFILMPTGGGKSLCYQLPALLSIGLTVVVSPLKSLISD 575
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + IPA L+ T +QA A+ +EL K +P
Sbjct: 576 QVQKL-ISLDIPAAHLSGSITENQAEAIYREL-----------------------SKKEP 611
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ K+LYVTPE+I + L L+ + LA FV+DE H
Sbjct: 612 ALKILYVTPEKISASPKLCSTLTNLYER--------------------ELLARFVIDEVH 651
Query: 380 CV 381
CV
Sbjct: 652 CV 653
>gi|195157038|ref|XP_002019403.1| GL12253 [Drosophila persimilis]
gi|194115994|gb|EDW38037.1| GL12253 [Drosophila persimilis]
Length = 1349
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 121/293 (41%), Gaps = 64/293 (21%)
Query: 114 PEPKRRPTLMELDSLSDTEDLDFTIPKQ------KDAILNLSS----CPDGRSQIFTPSS 163
P+PK P + LD E D TI +Q +I +L+S C S+I +S
Sbjct: 469 PKPKETPKTLSLDDDGFPE-YDETIFEQMHSQAASASITDLTSPSPSCSRSFSKITDLTS 527
Query: 164 VKHSSKSVDCKSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGN 223
S++ +S +++ A +S S++ +D G + + + FG
Sbjct: 528 GPSCSRTPTSRSQPTSTDAQKISGNFHSNVHNDGVTGEFDGQHFEHSTRLMHGLSYSFGL 587
Query: 224 RAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQTVSQ 283
++FRP Q Q A++ + DCFVL+PTGGGKSLCYQ +PA +++
Sbjct: 588 KSFRPNQLQVINATLLRNDCFVLMPTGGGKSLCYQ-----------LPA-------ILTE 629
Query: 284 AAAVLQELRQGLVLSQHYFLHQL---------------IFVLTCASRKDKPSCKLLYVTP 328
++ + L+ Q L L + + P KLLYVTP
Sbjct: 630 GVTIVISPLKSLIFDQINKLASLDICSKSLSGDVAMADVMAIYRDLESHPPMVKLLYVTP 689
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E+I + F ++L L+ I + FV+DEAHCV
Sbjct: 690 EKISSSARFQDILDTLNANNYI--------------------SRFVIDEAHCV 722
>gi|302772997|ref|XP_002969916.1| hypothetical protein SELMODRAFT_10140 [Selaginella moellendorffii]
gi|300162427|gb|EFJ29040.1| hypothetical protein SELMODRAFT_10140 [Selaginella moellendorffii]
Length = 703
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 85/176 (48%), Gaps = 35/176 (19%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQII-----TLNL 266
D++ N FGN++FRP QH+ A+++ D FVL+PTGGGKSL YQ I TL +
Sbjct: 23 DLKANNRRYFGNKSFRPNQHEIINATMSGHDVFVLMPTGGGKSLTYQLPAICCPGVTL-V 81
Query: 267 KFGIPATFLNSQQTVSQAAAVLQELRQGLVL-SQHYFLHQLIFVLTCASRKDKPSCKLLY 325
+ + ++ +SQA+ + L L Q L QL F D +LLY
Sbjct: 82 VCPLVSLIMDQIMHLSQASIRAEHLSSNLEYEEQRQILQQLNF--------DHCEYRLLY 133
Query: 326 VTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
VTPE+I + + L+ LHR+ R LA V+DEAHCV
Sbjct: 134 VTPEKIARSDNLLRNLENLHRR--------------------RLLARIVIDEAHCV 169
>gi|348679514|gb|EGZ19330.1| hypothetical protein PHYSODRAFT_491373 [Phytophthora sojae]
Length = 400
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 74/164 (45%), Gaps = 66/164 (40%)
Query: 241 QDCFVLLPTGGGKSLCY---------------------QDQIITL--NLKFGIPATFLNS 277
+DCFVL+PTGGGKSLCY QDQ+ L N GIPA FL S
Sbjct: 4 EDCFVLMPTGGGKSLCYQLPAVLSPGVTIVVSPLLSLIQDQVTALIQNPGCGIPAAFLTS 63
Query: 278 QQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSF 337
Q ++ ++ ELR+ + PS KLLY+TPE+IV +
Sbjct: 64 QTALTLKRSITAELRRPV-----------------------PSLKLLYLTPEKIVKSAEM 100
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+++L+ L+R + LA FV+DEAHCV
Sbjct: 101 ADLLQTLYR--------------------NKMLARFVIDEAHCV 124
>gi|158290315|ref|XP_311930.4| AGAP002967-PA [Anopheles gambiae str. PEST]
gi|157017834|gb|EAA07614.4| AGAP002967-PA [Anopheles gambiae str. PEST]
Length = 1425
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 75/182 (41%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG R FRP+Q Q A++ DCFVL+PTGGGKSLCYQ D
Sbjct: 649 FGLRTFRPIQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAVLTVGLTIVVSPLKSLILD 708
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN IPA L+ + ++ + +L +C P
Sbjct: 709 QVQKLN-SLDIPAGHLSGEANMADVQRIYDDLYS-----------------SC------P 744
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + F +L L+R+ L V+DEAH
Sbjct: 745 ELKLLYVTPEKISSSAKFQNLLSALYRRS--------------------LLGRIVIDEAH 784
Query: 380 CV 381
CV
Sbjct: 785 CV 786
>gi|218194880|gb|EEC77307.1| hypothetical protein OsI_15961 [Oryza sativa Indica Group]
Length = 2505
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 85/193 (44%), Gaps = 69/193 (35%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------- 257
++E N +FGNR+FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 1750 ELEANNKRVFGNRSFRPNQREIINATMSGNDVFVLMPTGGGKSLTYQLPALICNGVTLVV 1809
Query: 258 -------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
QDQI+ L L+ I A +L++ S+ +L+EL
Sbjct: 1810 SPLVSLIQDQIMHL-LQANISAAYLSASMEWSEQQEILRELMS----------------- 1851
Query: 311 TCASRKDKPSC--KLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
P+C KLLYVTPE+I + + L+ L+ +G
Sbjct: 1852 --------PTCTYKLLYVTPEKIAKSDALLRQLENLYSRG-------------------- 1883
Query: 369 QLAGFVVDEAHCV 381
L+ V+DEAHCV
Sbjct: 1884 HLSRIVIDEAHCV 1896
>gi|297849458|ref|XP_002892610.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
gi|297338452|gb|EFH68869.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
Length = 1189
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 85/201 (42%), Gaps = 65/201 (32%)
Query: 202 LSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---- 257
S E +E N +FGN +FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 428 WSSREFPWTRKLEVNNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPA 487
Query: 258 -----------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQH 300
QDQI+ L L+ IPA L++ ++ + QEL S+H
Sbjct: 488 LICGGITLVISPLVSLIQDQIMNL-LQANIPAASLSAGMEWAEQLKIFQELN-----SEH 541
Query: 301 YFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVV 360
KLLYVTPE++ + S L+ L+ +G
Sbjct: 542 ------------------SKYKLLYVTPEKVAKSDSLLRHLENLNSRG------------ 571
Query: 361 VLPHTCQRQLAGFVVDEAHCV 381
LA FV+DEAHCV
Sbjct: 572 --------LLARFVIDEAHCV 584
>gi|452005005|gb|EMD97461.1| hypothetical protein COCHEDRAFT_1220872 [Cochliobolus heterostrophus
C5]
Length = 1794
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 78/195 (40%), Gaps = 66/195 (33%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D+ A + FG R FRP Q + ++A CFVL+PTGGGKSLCYQ
Sbjct: 851 DLRTALIRRFGLRGFRPGQLETINTTLAGNHCFVLMPTGGGKSLCYQLPSVIASGKTHGV 910
Query: 259 ------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
DQ+ +FG+ A +N + T +Q ++ LR+
Sbjct: 911 TLVVSPLLSLMEDQVEACRQRFGMQAFLINGESTAAQKKMIMDGLRE------------- 957
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
R + ++LYVTPE + NQ + LH G+
Sbjct: 958 --------RDPQQFIQILYVTPEMLSKNQRMISAFQQLHSGGN----------------- 992
Query: 367 QRQLAGFVVDEAHCV 381
LA V+DEAHCV
Sbjct: 993 ---LARIVIDEAHCV 1004
>gi|451855559|gb|EMD68851.1| hypothetical protein COCSADRAFT_178603 [Cochliobolus sativus ND90Pr]
Length = 1787
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 83/208 (39%), Gaps = 69/208 (33%)
Query: 199 HGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ 258
H ++F Q D+ A + FG R FRP Q + ++A CFVL+PTGGGKSLCYQ
Sbjct: 841 HPGMNFPWSQ---DLRTALIRRFGLRGFRPGQLETINTTLAGDHCFVLMPTGGGKSLCYQ 897
Query: 259 -------------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQ 293
DQ+ +FG+ A +N + T +Q ++ LR+
Sbjct: 898 LPSVIASGKTHGVTLVVSPLLSLMEDQVEACRQRFGMQAFLINGESTAAQKKMIMDGLRE 957
Query: 294 GLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLK 353
R + ++LYVTPE + NQ + LH G+
Sbjct: 958 ---------------------RDPQQFIQILYVTPEMLSKNQRMINAFQQLHSGGN---- 992
Query: 354 VLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
LA V+DEAHCV
Sbjct: 993 ----------------LARIVIDEAHCV 1004
>gi|30681987|ref|NP_172562.2| ATP-dependent DNA helicase Q-like 4A [Arabidopsis thaliana]
gi|75329797|sp|Q8L840.1|RQL4A_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 4A; AltName:
Full=RecQ-like protein 4A; Short=AtRecQ4A;
Short=AtRecQl4A; AltName: Full=SGS1-like protein;
Short=AtSGS1
gi|21539533|gb|AAM53319.1| DNA helicase isolog [Arabidopsis thaliana]
gi|33589672|gb|AAQ22602.1| At1g10930 [Arabidopsis thaliana]
gi|332190544|gb|AEE28665.1| ATP-dependent DNA helicase Q-like 4A [Arabidopsis thaliana]
Length = 1188
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 85/201 (42%), Gaps = 65/201 (32%)
Query: 202 LSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---- 257
S E +E N +FGN +FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 430 WSSREFPWTRKLEVNNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPA 489
Query: 258 -----------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQH 300
QDQI+ L L+ IPA L++ ++ + QEL S+H
Sbjct: 490 LICGGITLVISPLVSLIQDQIMNL-LQANIPAASLSAGMEWAEQLKIFQELN-----SEH 543
Query: 301 YFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVV 360
KLLYVTPE++ + S L+ L+ +G
Sbjct: 544 ------------------SKYKLLYVTPEKVAKSDSLLRHLENLNSRG------------ 573
Query: 361 VLPHTCQRQLAGFVVDEAHCV 381
LA FV+DEAHCV
Sbjct: 574 --------LLARFVIDEAHCV 586
>gi|395502424|ref|XP_003755581.1| PREDICTED: Bloom syndrome protein [Sarcophilus harrisii]
Length = 1445
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A + +DCFVL+PTGGGKSLCYQ D
Sbjct: 697 FGLHHFRTNQLEAINAVLLGEDCFVLMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIID 756
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+AA + +L S+KD P
Sbjct: 757 QVQKLT-SLDIPATYLTGDKTDSEAANIYLQL----------------------SKKD-P 792
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 793 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 832
Query: 380 CV 381
CV
Sbjct: 833 CV 834
>gi|189200787|ref|XP_001936730.1| ATP-dependent DNA helicase hus2/rqh1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983829|gb|EDU49317.1| ATP-dependent DNA helicase hus2/rqh1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1420
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 88/221 (39%), Gaps = 69/221 (31%)
Query: 186 SNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFV 245
S KK + H ++F Q D+ A + FG R FRP Q +A +++ CFV
Sbjct: 483 SPKKAQLNMPAKNHPGMNFPWSQ---DLRTALLHRFGLRGFRPGQLEAINTTLSGDHCFV 539
Query: 246 LLPTGGGKSLCYQ-------------------------DQIITLNLKFGIPATFLNSQQT 280
L+PTGGGKSLCYQ DQ+ +FG+ A +N + T
Sbjct: 540 LMPTGGGKSLCYQLPSVIASGKTRGVTIVVSPLLSLMEDQVDACRNRFGMQAFLINGEST 599
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEV 340
+Q ++ LRQ R + ++LYVTPE + NQ
Sbjct: 600 AAQKNMIMDALRQ---------------------RDPQQFIQILYVTPEMLSKNQRMISA 638
Query: 341 LKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ LH G+ LA V+DEAHCV
Sbjct: 639 FQQLHSGGN--------------------LARIVIDEAHCV 659
>gi|281204428|gb|EFA78623.1| ATP-dependent DNA helicase RecQ family protein [Polysphondylium
pallidum PN500]
Length = 1358
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 74/166 (44%), Gaps = 23/166 (13%)
Query: 216 ANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFL 275
N IFGNR+FR Q + AS+A D FVL+PTGGGKSLCYQ I L G+
Sbjct: 679 TNRNIFGNRSFRLNQEEIINASMAGHDIFVLMPTGGGKSLCYQ---IPALLADGLTIIIS 735
Query: 276 NSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQ 335
+ +LQ L + + R D P+ KLLY+TPE++V +
Sbjct: 736 PLISLIQDQVMLLQNLSYPTAALTGSISSEEQTRIFKELRSDNPTIKLLYLTPEKVVQST 795
Query: 336 SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
S + L+ +G +L V+DEAHCV
Sbjct: 796 SIISLFHQLNSRG--------------------KLIRAVIDEAHCV 821
>gi|11121449|emb|CAC14868.1| DNA Helicase [Arabidopsis thaliana]
Length = 1182
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 85/201 (42%), Gaps = 65/201 (32%)
Query: 202 LSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---- 257
S E +E N +FGN +FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 424 WSSREFPWTRKLEVNNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPA 483
Query: 258 -----------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQH 300
QDQI+ L L+ IPA L++ ++ + QEL S+H
Sbjct: 484 LICGGITLVISPLVSLIQDQIMNL-LQANIPAASLSAGMEWAEQLKIFQELN-----SEH 537
Query: 301 YFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVV 360
KLLYVTPE++ + S L+ L+ +G
Sbjct: 538 ------------------SKYKLLYVTPEKVAKSDSLLRHLENLNSRG------------ 567
Query: 361 VLPHTCQRQLAGFVVDEAHCV 381
LA FV+DEAHCV
Sbjct: 568 --------LLARFVIDEAHCV 580
>gi|126273765|ref|XP_001368666.1| PREDICTED: Bloom syndrome protein [Monodelphis domestica]
Length = 1401
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A + +DCFVL+PTGGGKSLCYQ D
Sbjct: 647 FGLHHFRTNQLEAINAVLLGEDCFVLMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 706
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+AA + +L S+KD P
Sbjct: 707 QVQKLT-SLDIPATYLTGDKTDSEAANIYLQL----------------------SKKD-P 742
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 743 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 782
Query: 380 CV 381
CV
Sbjct: 783 CV 784
>gi|391333104|ref|XP_003740962.1| PREDICTED: Bloom syndrome protein-like [Metaseiulus occidentalis]
Length = 1216
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 77/183 (42%), Gaps = 68/183 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
FG FR Q QA A++ DCFVL+PTGGGKSLCYQ
Sbjct: 565 FFGLTEFRHNQKQAINAALLNNDCFVLMPTGGGKSLCYQLPAICSKGVTVVVSPLKSLIY 624
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L GIPAT + S+ + + V ++LR+ +
Sbjct: 625 DQVTKLK-SMGIPATAMMSEVSDRE---VYEDLRRA-----------------------E 657
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
P KLLYVTPE++ + + LHR+ QLA FV+DEA
Sbjct: 658 PLLKLLYVTPEKLAASNLLKNTFEKLHRRN--------------------QLARFVIDEA 697
Query: 379 HCV 381
HCV
Sbjct: 698 HCV 700
>gi|328707887|ref|XP_001947908.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1128
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 53/176 (30%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG R FRP Q +A A++ +CF+L+PTGGGKSLCYQ +PA L
Sbjct: 394 FGLRHFRPNQFEAINAALLGHNCFILMPTGGGKSLCYQ-----------LPAVIL----- 437
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQL----IFVLTCASRKDK-----------PSCKLLY 325
+ V+ + L++ Q L L +L+ + ++ P KLLY
Sbjct: 438 --KGITVVISPLKSLIIDQTQKLKSLDIPAAHLLSSITPDEENTIYSELWGADPGLKLLY 495
Query: 326 VTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
VTPE++ + +VL LH C+ LA V+DEAHCV
Sbjct: 496 VTPEKVAASNKLIQVLNNLH--------------------CRNLLARIVIDEAHCV 531
>gi|189054874|dbj|BAG36927.1| unnamed protein product [Homo sapiens]
Length = 1417
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 663 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVD 722
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A + +L S+KD P
Sbjct: 723 QVQKLT-SLDIPATYLTGDKTDSEATNIYLQL----------------------SKKD-P 758
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + L+ L+ + + LA FV+DEAH
Sbjct: 759 IIKLLYVTPEKICASNRLISTLENLYER--------------------KLLARFVIDEAH 798
Query: 380 CV 381
CV
Sbjct: 799 CV 800
>gi|178056740|ref|NP_001116556.1| Bloom syndrome protein [Sus scrofa]
gi|168084100|dbj|BAG09489.1| Bloom syndrome protein [Sus scrofa]
Length = 1426
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 80/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 675 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSSGVTIVISPLRSLIVD 734
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A ++ +L S+KD P
Sbjct: 735 QVQKLT-SLDIPATYLTGDKTDSEATSIYLQL----------------------SKKD-P 770
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 771 IIKLLYVTPEKVCASNRLISTLENLYNR--------------------KLLARFVIDEAH 810
Query: 380 CV 381
CV
Sbjct: 811 CV 812
>gi|281206277|gb|EFA80466.1| ATP-dependent DNA helicase RecQ family protein [Polysphondylium
pallidum PN500]
Length = 842
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 82/192 (42%), Gaps = 69/192 (35%)
Query: 213 MEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-------------- 258
+E N ++FGN RPLQ A + + ++D FV LPTGGGKSLC+Q
Sbjct: 381 VEGCNRLVFGNERLRPLQSDAINSVLYRRDTFVSLPTGGGKSLCFQLPAIIDSGVTLVIS 440
Query: 259 -------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLT 311
DQ+ L L+ G+P LNS VS+ +++EL
Sbjct: 441 PLLALMFDQLSKL-LQLGVPTCALNSSVPVSEKKKIIKELL------------------- 480
Query: 312 CASRKDKPSC--KLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
D C KLLYVTPER+ Q F ++L+ L+ Q
Sbjct: 481 -----DPAGCPYKLLYVTPERM-KTQEFIDILEHLNNTS--------------------Q 514
Query: 370 LAGFVVDEAHCV 381
L V+DEAHC+
Sbjct: 515 LKRLVIDEAHCI 526
>gi|395861752|ref|XP_003803142.1| PREDICTED: Bloom syndrome protein [Otolemur garnettii]
Length = 1389
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 80/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 653 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVD 712
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A ++ +L S+KD P
Sbjct: 713 QVQKLT-SLDIPATYLTGDKTDSEATSIYLQL----------------------SKKD-P 748
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 749 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 788
Query: 380 CV 381
CV
Sbjct: 789 CV 790
>gi|345315332|ref|XP_001515695.2| PREDICTED: Bloom syndrome protein [Ornithorhynchus anatinus]
Length = 865
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 81/182 (44%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 83 FGLHHFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACISPGVSIVISPLRSLIVD 142
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+AA++ +L S+KD P
Sbjct: 143 QVQKLT-SLDIPATYLTGDKTDSEAASIYLQL----------------------SKKD-P 178
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 179 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 218
Query: 380 CV 381
CV
Sbjct: 219 CV 220
>gi|4557365|ref|NP_000048.1| Bloom syndrome protein [Homo sapiens]
gi|1705486|sp|P54132.1|BLM_HUMAN RecName: Full=Bloom syndrome protein; AltName: Full=DNA helicase,
RecQ-like type 2; Short=RecQ2; AltName: Full=RecQ
protein-like 3
gi|1072122|gb|AAA87850.1| Bloom's syndrome protein [Homo sapiens]
gi|58003498|gb|AAW62255.1| Bloom syndrome [Homo sapiens]
gi|62739395|gb|AAH93622.1| Bloom syndrome [Homo sapiens]
gi|75517719|gb|AAI01568.1| Bloom syndrome [Homo sapiens]
gi|92096020|gb|AAI15033.1| Bloom syndrome [Homo sapiens]
gi|92097932|gb|AAI15031.1| Bloom syndrome [Homo sapiens]
gi|119622513|gb|EAX02108.1| Bloom syndrome, isoform CRA_b [Homo sapiens]
Length = 1417
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 663 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVD 722
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A + +L S+KD P
Sbjct: 723 QVQKLT-SLDIPATYLTGDKTDSEATNIYLQL----------------------SKKD-P 758
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + L+ L+ + + LA FV+DEAH
Sbjct: 759 IIKLLYVTPEKICASNRLISTLENLYER--------------------KLLARFVIDEAH 798
Query: 380 CV 381
CV
Sbjct: 799 CV 800
>gi|397472473|ref|XP_003807768.1| PREDICTED: Bloom syndrome protein isoform 1 [Pan paniscus]
gi|397472475|ref|XP_003807769.1| PREDICTED: Bloom syndrome protein isoform 2 [Pan paniscus]
Length = 1417
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 663 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVD 722
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A + +L S+KD P
Sbjct: 723 QVQKLT-SLDIPATYLTGDKTDSEATNIYLQL----------------------SKKD-P 758
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + L+ L+ + + LA FV+DEAH
Sbjct: 759 IIKLLYVTPEKICASNRLISTLENLYER--------------------KLLARFVIDEAH 798
Query: 380 CV 381
CV
Sbjct: 799 CV 800
>gi|410346341|gb|JAA40688.1| Bloom syndrome, RecQ helicase-like [Pan troglodytes]
Length = 1417
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 87/208 (41%), Gaps = 70/208 (33%)
Query: 200 GTLSFEELQALD---DMEFANVV--IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKS 254
G L E Q+L E + FG FR Q +A A++ +DCF+L+PTGGGKS
Sbjct: 637 GNLKHERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKS 696
Query: 255 LCYQ---------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQ 293
LCYQ DQ+ L IPAT+L +T S+A + +L
Sbjct: 697 LCYQLPACVSPGVTVVISPLRSLIVDQVQKLT-SLDIPATYLTGDKTDSEATNIYLQL-- 753
Query: 294 GLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLK 353
S+KD P KLLYVTPE+I + L+ L+ +
Sbjct: 754 --------------------SKKD-PIIKLLYVTPEKICASNRLISTLENLYER------ 786
Query: 354 VLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ LA FV+DEAHCV
Sbjct: 787 --------------KLLARFVIDEAHCV 800
>gi|410261436|gb|JAA18684.1| Bloom syndrome, RecQ helicase-like [Pan troglodytes]
Length = 1417
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 87/208 (41%), Gaps = 70/208 (33%)
Query: 200 GTLSFEELQALD---DMEFANVV--IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKS 254
G L E Q+L E + FG FR Q +A A++ +DCF+L+PTGGGKS
Sbjct: 637 GNLKHERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKS 696
Query: 255 LCYQ---------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQ 293
LCYQ DQ+ L IPAT+L +T S+A + +L
Sbjct: 697 LCYQLPACVSPGVTVVISPLRSLIVDQVQKLT-SLDIPATYLTGDKTDSEATNIYLQL-- 753
Query: 294 GLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLK 353
S+KD P KLLYVTPE+I + L+ L+ +
Sbjct: 754 --------------------SKKD-PIIKLLYVTPEKICASNRLISTLENLYER------ 786
Query: 354 VLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ LA FV+DEAHCV
Sbjct: 787 --------------KLLARFVIDEAHCV 800
>gi|345798304|ref|XP_003434427.1| PREDICTED: Bloom syndrome protein [Canis lupus familiaris]
Length = 1420
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 108/262 (41%), Gaps = 80/262 (30%)
Query: 152 PDGRSQIFTPSSVKHSSKSVDCKSGVSTS------SASSVSNKKRSSLISDNEHGTLSFE 205
P + P S + SS +C ST+ S + ++K +L S N L E
Sbjct: 589 PIKEGRPVKPVSERISSAKTNCLPVASTAQNKNSESIQNYTDKSAQNLASRN----LKHE 644
Query: 206 ELQALD---DMEFANVV--IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-- 258
Q+L E + FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ
Sbjct: 645 RFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLP 704
Query: 259 -------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQ 299
DQ+ L IPAT+L +T S+A ++ +L
Sbjct: 705 ACVSPGVTIVISPLRSLIVDQVQKLT-SLDIPATYLTGDKTDSEATSIYLQL-------- 755
Query: 300 HYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDV 359
S+KD P KLLYVTPE++ + L+ L+ +
Sbjct: 756 --------------SKKD-PIIKLLYVTPEKVCASNRLLSTLENLYER------------ 788
Query: 360 VVLPHTCQRQLAGFVVDEAHCV 381
+ LA FV+DEAHCV
Sbjct: 789 --------KLLARFVIDEAHCV 802
>gi|109082375|ref|XP_001097543.1| PREDICTED: Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 662 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 721
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A + +L S+KD P
Sbjct: 722 QVQKLT-SLDIPATYLTGDKTDSEATNIYLQL----------------------SKKD-P 757
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + L+ L+ + + LA FV+DEAH
Sbjct: 758 IIKLLYVTPEKICASNRLISTLENLYER--------------------KLLARFVIDEAH 797
Query: 380 CV 381
CV
Sbjct: 798 CV 799
>gi|403258502|ref|XP_003921799.1| PREDICTED: Bloom syndrome protein [Saimiri boliviensis boliviensis]
Length = 1499
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 662 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 721
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A + +L S+KD P
Sbjct: 722 QVQKLT-SLDIPATYLTGDKTDSEATNIYLQL----------------------SKKD-P 757
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + L+ L+ + + LA FV+DEAH
Sbjct: 758 IIKLLYVTPEKICASNRLVSTLENLYER--------------------KLLARFVIDEAH 797
Query: 380 CV 381
CV
Sbjct: 798 CV 799
>gi|383420697|gb|AFH33562.1| Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 662 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 721
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A + +L S+KD P
Sbjct: 722 QVQKLT-SLDIPATYLTGDKTDSEATNIYLQL----------------------SKKD-P 757
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + L+ L+ + + LA FV+DEAH
Sbjct: 758 IIKLLYVTPEKICASNRLISTLENLYER--------------------KLLARFVIDEAH 797
Query: 380 CV 381
CV
Sbjct: 798 CV 799
>gi|114658901|ref|XP_510594.2| PREDICTED: Bloom syndrome protein isoform 2 [Pan troglodytes]
gi|332844655|ref|XP_003314898.1| PREDICTED: Bloom syndrome protein isoform 1 [Pan troglodytes]
Length = 1417
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 87/208 (41%), Gaps = 70/208 (33%)
Query: 200 GTLSFEELQALD---DMEFANVV--IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKS 254
G L E Q+L E + FG FR Q +A A++ +DCF+L+PTGGGKS
Sbjct: 637 GNLKHERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKS 696
Query: 255 LCYQ---------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQ 293
LCYQ DQ+ L IPAT+L +T S+A + +L
Sbjct: 697 LCYQLPACVSPGVTVVISPLRSLIVDQVQKLT-SLDIPATYLTGDKTDSEATNIYLQL-- 753
Query: 294 GLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLK 353
S+KD P KLLYVTPE+I + L+ L+ +
Sbjct: 754 --------------------SKKD-PIIKLLYVTPEKICASNRLISTLENLYER------ 786
Query: 354 VLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ LA FV+DEAHCV
Sbjct: 787 --------------KLLARFVIDEAHCV 800
>gi|355692996|gb|EHH27599.1| Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 662 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 721
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A + +L S+KD P
Sbjct: 722 QVQKLT-SLDIPATYLTGDKTDSEATNIYLQL----------------------SKKD-P 757
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + L+ L+ + + LA FV+DEAH
Sbjct: 758 IIKLLYVTPEKICASNRLISTLENLYER--------------------KLLARFVIDEAH 797
Query: 380 CV 381
CV
Sbjct: 798 CV 799
>gi|301768849|ref|XP_002919837.1| PREDICTED: Bloom syndrome protein-like [Ailuropoda melanoleuca]
gi|281350343|gb|EFB25927.1| hypothetical protein PANDA_008500 [Ailuropoda melanoleuca]
Length = 1423
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 108/262 (41%), Gaps = 80/262 (30%)
Query: 152 PDGRSQIFTPSSVKHSSKSVDCKSGVSTS------SASSVSNKKRSSLISDNEHGTLSFE 205
P + P S + SS +C ST+ S + ++K +L S N L E
Sbjct: 594 PIKEGRPVKPVSERISSAKANCLPVASTAQDKNSESVQNYTDKSAQNLASRN----LKHE 649
Query: 206 ELQALD---DMEFANVV--IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-- 258
Q+L E + FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ
Sbjct: 650 RFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLP 709
Query: 259 -------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQ 299
DQ+ L IPAT+L +T S+A ++ +L
Sbjct: 710 ACVSPGVTIVISPLRSLIVDQVQKLT-SLDIPATYLTGDKTDSEATSIYLQL-------- 760
Query: 300 HYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDV 359
S+KD P KLLYVTPE++ + L+ L+ +
Sbjct: 761 --------------SKKD-PIIKLLYVTPEKVCASNRLISTLENLYER------------ 793
Query: 360 VVLPHTCQRQLAGFVVDEAHCV 381
+ LA FV+DEAHCV
Sbjct: 794 --------KLLARFVIDEAHCV 807
>gi|149690733|ref|XP_001502766.1| PREDICTED: Bloom syndrome protein [Equus caballus]
Length = 1421
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 80/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 669 FGLHHFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 728
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A ++ +L S+KD P
Sbjct: 729 QVQKLT-SLDIPATYLTGDKTDSEATSIYLQL----------------------SKKD-P 764
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 765 IIKLLYVTPEKVCASNRLITTLENLYER--------------------KLLARFVIDEAH 804
Query: 380 CV 381
CV
Sbjct: 805 CV 806
>gi|395747150|ref|XP_002825880.2| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein [Pongo
abelii]
Length = 1398
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 79/173 (45%), Gaps = 55/173 (31%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------DQIITLNLKF---- 268
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ I+ L+
Sbjct: 652 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 711
Query: 269 GIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTP 328
IPAT+L +T S+A + +L S+KD P KLLYVTP
Sbjct: 712 QIPATYLTGDKTDSEATNIYLQL----------------------SKKD-PIIKLLYVTP 748
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E+I + L+ L+ + + LA FV+DEAHCV
Sbjct: 749 EKICASNRLVSTLENLYER--------------------KLLARFVIDEAHCV 781
>gi|242063976|ref|XP_002453277.1| hypothetical protein SORBIDRAFT_04g003070 [Sorghum bicolor]
gi|241933108|gb|EES06253.1| hypothetical protein SORBIDRAFT_04g003070 [Sorghum bicolor]
Length = 1154
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 86/193 (44%), Gaps = 71/193 (36%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------- 257
D+E N FGNR+FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 428 DLEAKNRNKFGNRSFRPNQREIINATMSGYDVFVLMPTGGGKSLTYQLPALISVGLTLVV 487
Query: 258 -------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
QDQI+ L+ + IPAT+L+ S+ ++++L+
Sbjct: 488 CPLVSLIQDQIMHLS-QANIPATYLSGNLDWSEQQEIMRDLK------------------ 528
Query: 311 TCASRKDKPSC--KLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
SC KLLYVTPE+I + + S +L+ L +G
Sbjct: 529 ---------SCRYKLLYVTPEKIARSGALSGLLRDLDSQG-------------------- 559
Query: 369 QLAGFVVDEAHCV 381
L+ V+DEAHCV
Sbjct: 560 HLSRIVIDEAHCV 572
>gi|431920255|gb|ELK18290.1| Bloom syndrome protein [Pteropus alecto]
Length = 1272
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 671 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 730
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A ++ +L S+KD P
Sbjct: 731 QVQKLT-SLDIPATYLTGDKTDSEATSIYLQL----------------------SKKD-P 766
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + LA FV+DEAH
Sbjct: 767 IIKLLYVTPEKVCASNRLISTLENLYERN--------------------LLARFVIDEAH 806
Query: 380 CV 381
CV
Sbjct: 807 CV 808
>gi|327265368|ref|XP_003217480.1| PREDICTED: Bloom syndrome protein homolog [Anolis carolinensis]
Length = 1383
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 81/183 (44%), Gaps = 67/183 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCFVL+PTGGGKSLCYQ D
Sbjct: 642 FGLHHFRTNQQEAINAALLGEDCFVLMPTGGGKSLCYQLPACILVGVTIVISPLRSLIVD 701
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T ++A+ + +L S+KD P
Sbjct: 702 QVQKLT-SMDIPATYLTGDKTDAEASRIYMQL----------------------SKKD-P 737
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ-LAGFVVDEA 378
KLLYVTPE++ + L+ L+ QRQ LA FV+DEA
Sbjct: 738 IIKLLYVTPEKVCSSGRLMSTLENLY---------------------QRQLLARFVIDEA 776
Query: 379 HCV 381
HCV
Sbjct: 777 HCV 779
>gi|219518767|gb|AAI43281.1| BLM protein [Homo sapiens]
Length = 1042
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 288 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVD 347
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A + +L S+KD P
Sbjct: 348 QVQKLT-SLDIPATYLTGDKTDSEATNIYLQL----------------------SKKD-P 383
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + L+ L+ + + LA FV+DEAH
Sbjct: 384 IIKLLYVTPEKICASNRLISTLENLYER--------------------KLLARFVIDEAH 423
Query: 380 CV 381
CV
Sbjct: 424 CV 425
>gi|402875293|ref|XP_003901445.1| PREDICTED: Bloom syndrome protein-like [Papio anubis]
Length = 1042
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 288 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 347
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A + +L S+KD P
Sbjct: 348 QVQKLT-SLDIPATYLTGDKTDSEATNIYLQL----------------------SKKD-P 383
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + L+ L+ + + LA FV+DEAH
Sbjct: 384 IIKLLYVTPEKICASNRLISTLENLYER--------------------KLLARFVIDEAH 423
Query: 380 CV 381
CV
Sbjct: 424 CV 425
>gi|221040662|dbj|BAH12008.1| unnamed protein product [Homo sapiens]
Length = 1047
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 316 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVD 375
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A + +L S+KD P
Sbjct: 376 QVQKLT-SLDIPATYLTGDKTDSEATNIYLQL----------------------SKKD-P 411
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + L+ L+ + + LA FV+DEAH
Sbjct: 412 IIKLLYVTPEKICASNRLISTLENLYER--------------------KLLARFVIDEAH 451
Query: 380 CV 381
CV
Sbjct: 452 CV 453
>gi|410960520|ref|XP_003986837.1| PREDICTED: Bloom syndrome protein [Felis catus]
Length = 1428
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 80/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 674 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 733
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A ++ +L S+KD P
Sbjct: 734 QVQKLT-SLDIPATYLTGDKTDSEATSIYLQL----------------------SKKD-P 769
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 770 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 809
Query: 380 CV 381
CV
Sbjct: 810 CV 811
>gi|380797039|gb|AFE70395.1| Bloom syndrome protein, partial [Macaca mulatta]
Length = 786
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 32 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 91
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A + +L S+KD P
Sbjct: 92 QVQKLT-SLDIPATYLTGDKTDSEATNIYLQL----------------------SKKD-P 127
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + L+ L+ + + LA FV+DEAH
Sbjct: 128 IIKLLYVTPEKICASNRLISTLENLYER--------------------KLLARFVIDEAH 167
Query: 380 CV 381
CV
Sbjct: 168 CV 169
>gi|432093931|gb|ELK25783.1| Bloom syndrome protein [Myotis davidii]
Length = 1296
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 80/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 544 FGLHHFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 603
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A ++ +L S+KD P
Sbjct: 604 QVQKLT-SLDIPATYLTGDKTDSEATSIYLQL----------------------SKKD-P 639
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 640 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 679
Query: 380 CV 381
CV
Sbjct: 680 CV 681
>gi|261289349|ref|XP_002603118.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
gi|229288434|gb|EEN59129.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
Length = 666
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 78/183 (42%), Gaps = 65/183 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q +AC A++ +DCF+L+PTGGGKSLCY Q
Sbjct: 19 VFGLHRFRTNQLEACNAALLGKDCFILMPTGGGKSLCYQLPAIVSGGVTIVISPLKSLIQ 78
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ LN +PA L+ + + A+ V +L +
Sbjct: 79 DQVSKLN-GLEVPAAHLSGELSQQVASGVYMDL-----------------------ARRT 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
P KLLYVTPE++ ++ LK L+++G L FV+DEA
Sbjct: 115 PQTKLLYVTPEKVSSSEKLLSTLKSLYQRG--------------------LLDRFVIDEA 154
Query: 379 HCV 381
HCV
Sbjct: 155 HCV 157
>gi|413935535|gb|AFW70086.1| hypothetical protein ZEAMMB73_899248 [Zea mays]
Length = 613
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 85/191 (44%), Gaps = 67/191 (35%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------- 257
++E N FGN +FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 445 ELEAKNRNKFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALISSGLTLVV 504
Query: 258 -------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
QDQI+ L+ + IPAT+L+ S+ ++++L +
Sbjct: 505 CPLVSLIQDQIMHLS-QANIPATYLSGNLDWSEQQEIMKDL------------------M 545
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
+C KLLYVTPE+I + + S +L L+ +G L
Sbjct: 546 SC-------RYKLLYVTPEKIAKSGALSRLLDNLNSQG--------------------HL 578
Query: 371 AGFVVDEAHCV 381
+ V+DEAHCV
Sbjct: 579 SRIVIDEAHCV 589
>gi|355672742|gb|AER95092.1| Bloom syndrome, RecQ helicase-like protein [Mustela putorius furo]
Length = 843
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 80/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 85 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 144
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A ++ +L S+KD P
Sbjct: 145 QVQKLT-SLDIPATYLTGDKTDSEATSIYLQL----------------------SKKD-P 180
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 181 IIKLLYVTPEKVCASNRLISTLENLYER--------------------KLLARFVIDEAH 220
Query: 380 CV 381
CV
Sbjct: 221 CV 222
>gi|344284334|ref|XP_003413923.1| PREDICTED: Bloom syndrome protein [Loxodonta africana]
Length = 1429
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 80/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 675 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACIAPGVTIVISPLRSLIVD 734
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A ++ +L S+KD P
Sbjct: 735 QVQKLT-SLDIPATYLTGDKTDSEATSIYLQL----------------------SKKD-P 770
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+++ LA FV+DEAH
Sbjct: 771 IIKLLYVTPEKVCASNRLISTLENLYQRT--------------------LLARFVIDEAH 810
Query: 380 CV 381
CV
Sbjct: 811 CV 812
>gi|291237646|ref|XP_002738744.1| PREDICTED: Bloom syndrome protein-like [Saccoglossus kowalevskii]
Length = 1050
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 79/171 (46%), Gaps = 41/171 (23%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNS-Q 278
IFG FR Q +A A++ +DCF+L+PTGGGKSLCYQ +P +
Sbjct: 461 IFGLHKFRTNQLEAINAALLSKDCFILMPTGGGKSLCYQ-----------LPGSISKGLT 509
Query: 279 QTVSQAAAVLQELRQGLVLSQHYFLH--------QLIFVLTCASRKDKPSCKLLYVTPER 330
VS +++Q+ Q L L H ++ + SR+D P KLLYVTPE+
Sbjct: 510 LVVSPLKSLIQDQVQKLCLRDVPSAHLSGDASPNEVELIYRELSRRD-PQLKLLYVTPEK 568
Query: 331 IVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
I + L+ L+ +G L+ FV+DEAHCV
Sbjct: 569 ISSSSKLVSTLENLYSRG--------------------MLSRFVIDEAHCV 599
>gi|334183459|ref|NP_176289.7| RECQ helicase L4B [Arabidopsis thaliana]
gi|75334305|sp|Q9FT70.1|RQL4B_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 4B; AltName:
Full=RecQ-like protein 4B; Short=AtRecQ4B;
Short=AtRecQl4B
gi|11121451|emb|CAC14869.1| DNA Helicase [Arabidopsis thaliana]
gi|332195628|gb|AEE33749.1| RECQ helicase L4B [Arabidopsis thaliana]
Length = 1150
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 84/191 (43%), Gaps = 65/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------- 257
++E N ++FGN +FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 456 NLEVYNKLVFGNHSFRPNQREIINATMSGCDVFVLMPTGGGKSLTYQLPALLCAGITLVI 515
Query: 258 -------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
QDQI+ L L+ I A L++ ++ +LQEL
Sbjct: 516 SPLVSLIQDQIMNL-LQTNISAASLSAGMEWAEQLEILQELSS----------------- 557
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
+K KLLYVTPE++ ++S L+ L+ + L
Sbjct: 558 ------EKSKYKLLYVTPEKVAKSESLLRHLEILNSRS--------------------LL 591
Query: 371 AGFVVDEAHCV 381
A FV+DEAHCV
Sbjct: 592 ARFVIDEAHCV 602
>gi|148236484|ref|NP_001079095.1| Bloom syndrome protein homolog [Xenopus laevis]
gi|17366056|sp|Q9DEY9.1|BLM_XENLA RecName: Full=Bloom syndrome protein homolog; Short=xBLM; AltName:
Full=RecQ helicase homolog
gi|11120568|gb|AAG30928.1|AF307841_1 Bloom's syndrome-like protein [Xenopus laevis]
Length = 1364
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 81/183 (44%), Gaps = 67/183 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A + +DCF+L+PTGGGKSLCYQ D
Sbjct: 615 FGLHRFRTNQLEAINACLCGEDCFILMPTGGGKSLCYQLPGCISPGVTIVISPLRSLIVD 674
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T ++AA++ +L S+KD P
Sbjct: 675 QVQKLT-SLDIPATYLTGDKTDAEAASIYLQL----------------------SKKD-P 710
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ-LAGFVVDEA 378
KLLYVTPE++ + ++ L+ +RQ LA FV+DEA
Sbjct: 711 IIKLLYVTPEKVCASTRLISTMENLY---------------------ERQLLARFVIDEA 749
Query: 379 HCV 381
HCV
Sbjct: 750 HCV 752
>gi|67971772|dbj|BAE02228.1| unnamed protein product [Macaca fascicularis]
Length = 408
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 93 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 152
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT+L +T S+A + +L S+KD P
Sbjct: 153 QVQKLT-SLDIPATYLTGDKTDSEATNIYLQL----------------------SKKD-P 188
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + L+ L+ + + LA FV+DEAH
Sbjct: 189 IIKLLYVTPEKICASNRLISTLENLYER--------------------KLLARFVIDEAH 228
Query: 380 CV 381
CV
Sbjct: 229 CV 230
>gi|209882405|ref|XP_002142639.1| ATP-dependent DNA helicase, RecQ family protein [Cryptosporidium
muris RN66]
gi|209558245|gb|EEA08290.1| ATP-dependent DNA helicase, RecQ family protein [Cryptosporidium
muris RN66]
Length = 997
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 81/196 (41%), Gaps = 69/196 (35%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D+ N IFGNR+FR Q + A ++++D FV++PTGGGKSLC+Q
Sbjct: 207 DLYRINEKIFGNRSFRENQREIMNAIISQRDVFVMMPTGGGKSLCFQLPGLIPQNPHGSV 266
Query: 259 ------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
DQI LNL GI LNS Q A+ LR G
Sbjct: 267 TVVVMPLLALMVDQIEQLNL-LGIKCAGLNSNQNKEVVNAIYNSLRNG------------ 313
Query: 307 IFVLTCASRKDKPSC-KLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
D +C + L+VTPE++ ++ +L L+
Sbjct: 314 ----------DPQTCPQFLFVTPEKLKHSEVLFSILHTLNN------------------- 344
Query: 366 CQRQLAGFVVDEAHCV 381
Q +L FV+DEAHCV
Sbjct: 345 -QSRLLRFVIDEAHCV 359
>gi|330841793|ref|XP_003292875.1| hypothetical protein DICPUDRAFT_157642 [Dictyostelium purpureum]
gi|325076832|gb|EGC30587.1| hypothetical protein DICPUDRAFT_157642 [Dictyostelium purpureum]
Length = 884
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 79/187 (42%), Gaps = 66/187 (35%)
Query: 217 NVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------------- 257
N ++FGN +FRPLQ Q + + +D FV LPTGGGKSLC+
Sbjct: 406 NRMVFGNSSFRPLQQQVINSILHGRDTFVSLPTGGGKSLCFQIPSLVDSSGISIVLSPLL 465
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L G+PA +NS T Q +++L
Sbjct: 466 SLMQDQVHKLKL-LGVPACSINSSNTPLQNRKTIEQLLD--------------------- 503
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
KD + ++YV+PER+ F EVL L+ +G I+ +
Sbjct: 504 -KDNCNISIVYVSPERL-SQTEFLEVLNTLNNQGRIK--------------------RLI 541
Query: 375 VDEAHCV 381
VDEAHC+
Sbjct: 542 VDEAHCI 548
>gi|355336772|gb|AER57871.1| ATP-dependent DNA helicase RecQ family protein [Acytostelium
subglobosum]
Length = 1147
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 65/192 (33%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------- 257
D++E N +FGNR++R Q + A ++ D FVL+PTGGGKSLCY
Sbjct: 476 DEVERINRTVFGNRSWRKNQVEIINACMSGHDVFVLMPTGGGKSLCYQIPAMCNEGVTII 535
Query: 258 --------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
QDQ++ L PA L + + ++LRQ
Sbjct: 536 ISPLISLIQDQVMLLQT-LAYPAAALTGTTSSEDVTQIYRDLRQT--------------- 579
Query: 310 LTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
P+ KLLY+TPE++V + + ++ + L+ G
Sbjct: 580 --------PPTLKLLYLTPEKVVQSPAIMDLFRNLNNNG--------------------L 611
Query: 370 LAGFVVDEAHCV 381
LA V+DEAHCV
Sbjct: 612 LARAVIDEAHCV 623
>gi|67605840|ref|XP_666710.1| DEAD/DEAH box helicase [Cryptosporidium hominis TU502]
gi|54657750|gb|EAL36476.1| DEAD/DEAH box helicase [Cryptosporidium hominis]
Length = 990
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 103/242 (42%), Gaps = 73/242 (30%)
Query: 170 SVDCKSGVSTSSASSVSNKK----RSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRA 225
+V KS +T+ SS + KK R + + + E+ + +DM+ N +FGN +
Sbjct: 178 TVKTKSRKNTTKKSSSNEKKLLNCRRKVQVNEKDQNWEREDFEWSEDMKRINEQVFGNES 237
Query: 226 FRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-------------------------DQ 260
FR Q Q A V+++D FV++PTGGGKSLC+Q DQ
Sbjct: 238 FRSNQRQIMNAVVSQRDVFVMMPTGGGKSLCFQLPGLLKYNNPASVTVVIMPLVALMVDQ 297
Query: 261 IITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
I LN+ GI LNS Q+ + + L++G D +
Sbjct: 298 IEQLNI-LGIKCASLNSNQSADELNHITSLLKKG----------------------DPET 334
Query: 321 C-KLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
C L+VTPE++ +++ +LK ++ + +L F +DEAH
Sbjct: 335 CPAFLFVTPEKLKHSKTLFSLLKQIND--------------------ESRLLRFAIDEAH 374
Query: 380 CV 381
CV
Sbjct: 375 CV 376
>gi|328866871|gb|EGG15254.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
fasciculatum]
Length = 834
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 86/207 (41%), Gaps = 70/207 (33%)
Query: 198 EHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY 257
E TL +E D + +FG R LQ A A + ++D FV LPTGGGKSLC+
Sbjct: 363 EDNTLFSQEFPWDDLVNSCAKTVFGVGELRALQKDAINAILYRRDTFVSLPTGGGKSLCF 422
Query: 258 Q---------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELR--QG 294
Q DQ+ L + GIPA LNS +VS+ ++EL QG
Sbjct: 423 QLPALIDAGLTVVVSPLLALMNDQVTKLRQR-GIPAAVLNSGISVSERTRTMEELENPQG 481
Query: 295 LVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKV 354
S KLLYVTPER+V ++ F++ + H +G +R
Sbjct: 482 -------------------------SIKLLYVTPERLV-SEDFAKRMARWHYQGRLRR-- 513
Query: 355 LTTDVVVLPHTCQRQLAGFVVDEAHCV 381
V+DEAHC+
Sbjct: 514 ------------------LVIDEAHCI 522
>gi|452823697|gb|EME30705.1| ATP-dependent DNA helicase RecQ [Galdieria sulphuraria]
Length = 1210
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 105/245 (42%), Gaps = 34/245 (13%)
Query: 139 PKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVSTSSASSVSNKKRSSLISDNE 198
P++ + + + C ++ I PS V S + + S K+ + I N+
Sbjct: 318 PEKPNVLTEDNCCRTEKTLIHNPSRVSSSVNN-------AVMDISQSPEKEWNIPIVRND 370
Query: 199 HGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ 258
+ E ++ N + FGN +FRP Q ++ A ++ +D FVL+PTGGGKSLCYQ
Sbjct: 371 YNLQWTGEFPWTYQLKKDNYIYFGNVSFRPNQLESMNAILSNRDVFVLMPTGGGKSLCYQ 430
Query: 259 DQIITLNLKFGIPATFLNSQ--QTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRK 316
L +G T + S ++ + L E Q+ + R
Sbjct: 431 -----LPALWGPGVTIVVSPLISLITDQVSQLHEKGIFAAALTASTSAQVRKSIFDDLRA 485
Query: 317 DKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
P +LLYVTPERI +Q F + L L+ + + LA FV+D
Sbjct: 486 TFPRLRLLYVTPERISKSQMFHKFLNQLYGR--------------------KLLARFVID 525
Query: 377 EAHCV 381
EAHCV
Sbjct: 526 EAHCV 530
>gi|330932861|ref|XP_003303943.1| hypothetical protein PTT_16345 [Pyrenophora teres f. teres 0-1]
gi|311319743|gb|EFQ87962.1| hypothetical protein PTT_16345 [Pyrenophora teres f. teres 0-1]
Length = 1750
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 78/195 (40%), Gaps = 66/195 (33%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D+ A + FG R FRP Q +A +++ CFVL+PTGGGKSLCYQ
Sbjct: 835 DLRTALLHRFGLRGFRPGQLEAINTTLSGDHCFVLMPTGGGKSLCYQLPSVIASGKTRGV 894
Query: 259 ------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
DQ+ +F + A +N + T +Q ++ LRQ
Sbjct: 895 TIVVSPLLSLMEDQVDACRNRFAMQAFLINGESTAAQKNMIMDALRQ------------- 941
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
R + ++LYVTPE + NQ + LH G+
Sbjct: 942 --------RDPQQFIQILYVTPEMLSKNQRMISAFQQLHSGGN----------------- 976
Query: 367 QRQLAGFVVDEAHCV 381
LA V+DEAHCV
Sbjct: 977 ---LARIVIDEAHCV 988
>gi|388581963|gb|EIM22269.1| ATP-dependent DNA helicase [Wallemia sebi CBS 633.66]
Length = 1115
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 81/170 (47%), Gaps = 35/170 (20%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQ 278
+F AFR Q +A A++ +D FVL+PTGGGKS+CYQ + L G+
Sbjct: 368 MFKLNAFRKNQREAIDATLDAKDVFVLMPTGGGKSVCYQIPACVDLGKTHGVSI------ 421
Query: 279 QTVSQAAAVLQELRQGLV---LSQHYFLHQLIFVLTCAS----RKDKPSCKLLYVTPERI 331
+S +++Q+ Q LV + + + A R+ KP +LLYVTPE +
Sbjct: 422 -VISPLLSLIQDQVQQLVSKDVPSYAYSGGTALADKRAIQDDLRRPKPITRLLYVTPEML 480
Query: 332 VGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ +F ++LK LH K QLA FVVDEAHCV
Sbjct: 481 GQSNAFKDILKQLHAKD--------------------QLARFVVDEAHCV 510
>gi|328865354|gb|EGG13740.1| hypothetical protein DFA_11501 [Dictyostelium fasciculatum]
Length = 1329
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 83/186 (44%), Gaps = 53/186 (28%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGI 270
D+ N +FGN +FR Q + A++ D FVL+PTGGGKSLCYQ I
Sbjct: 610 DEARRINSELFGNASFRHNQLEIINAAMDGNDVFVLMPTGGGKSLCYQ-----------I 658
Query: 271 PATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV---LTCASRKDK--------- 318
PA ++N TV + + L+ Q FL + ++ LT A+ D+
Sbjct: 659 PA-YMNQGLTVIISPLI------SLIQDQVTFLKGMGYMARSLTSATDADEKREIYADIK 711
Query: 319 ---PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
P KLLY+TPERIV +Q + L+ ++ A ++
Sbjct: 712 STDPQTKLLYLTPERIVQDQGMMGIFSNLY--------------------SRQMFARVII 751
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 752 DEAHCV 757
>gi|413935533|gb|AFW70084.1| hypothetical protein ZEAMMB73_899248 [Zea mays]
Length = 750
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 85/191 (44%), Gaps = 67/191 (35%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------- 257
++E N FGN +FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 430 ELEAKNRNKFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALISSGLTLVV 489
Query: 258 -------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
QDQI+ L+ + IPAT+L+ S+ ++++L +
Sbjct: 490 CPLVSLIQDQIMHLS-QANIPATYLSGNLDWSEQQEIMKDL------------------M 530
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
+C KLLYVTPE+I + + S +L L+ +G L
Sbjct: 531 SCRY-------KLLYVTPEKIAKSGALSRLLDNLNSQG--------------------HL 563
Query: 371 AGFVVDEAHCV 381
+ V+DEAHCV
Sbjct: 564 SRIVIDEAHCV 574
>gi|198454689|ref|XP_001359676.2| GA19957 [Drosophila pseudoobscura pseudoobscura]
gi|198132910|gb|EAL28826.2| GA19957 [Drosophila pseudoobscura pseudoobscura]
Length = 1349
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 120/293 (40%), Gaps = 64/293 (21%)
Query: 114 PEPKRRPTLMELDSLSDTEDLDFTIPKQ------KDAILNLSS----CPDGRSQIFTPSS 163
P+PK P + LD E D T+ +Q +I +L+S C +I ++
Sbjct: 469 PKPKETPQTLSLDDDGFPE-YDETMFEQMHSQAASASITDLTSPSPSCSRSFGKITDLTA 527
Query: 164 VKHSSKSVDCKSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGN 223
S++ +S +++ A +S S++ +D G + + + FG
Sbjct: 528 GPSCSRTPTSRSQPTSTDAQKISGNFHSNVHNDGVTGEFDGQHFEHSTRLMHGLSYSFGL 587
Query: 224 RAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQTVSQ 283
++FRP Q Q A++ + DCFVL+PTGGGKSLCYQ +PA +++
Sbjct: 588 KSFRPNQLQVINATLLRNDCFVLMPTGGGKSLCYQ-----------LPA-------ILTE 629
Query: 284 AAAVLQELRQGLVLSQHYFLHQL---------------IFVLTCASRKDKPSCKLLYVTP 328
++ + L+ Q L L + + P KLLYVTP
Sbjct: 630 GVTIVISPLKSLIFDQINKLASLDICSKSLSGDVAMADVMAIYRDLESHPPMVKLLYVTP 689
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E+I + F ++L L+ I + FV+DEAHCV
Sbjct: 690 EKISSSARFQDILDTLNANNYI--------------------SRFVIDEAHCV 722
>gi|66475914|ref|XP_627773.1| RecQ bloom helicase (RNA helicase+hrdc) [Cryptosporidium parvum
Iowa II]
gi|32399019|emb|CAD98259.1| DEAD/DEAH box helicase [Cryptosporidium parvum]
gi|46229189|gb|EAK90038.1| RecQ bloom helicase (RNA helicase+hrdc) [Cryptosporidium parvum
Iowa II]
Length = 990
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 103/242 (42%), Gaps = 73/242 (30%)
Query: 170 SVDCKSGVSTSSASSVSNKK----RSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRA 225
+V KS +T+ SS + KK R + + + E+ + +DM+ N +FGN +
Sbjct: 178 TVKTKSRKNTTKKSSSNEKKLLNCRRKVQVNEKDQDWEREDFEWSEDMKRINEQVFGNES 237
Query: 226 FRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-------------------------DQ 260
FR Q Q A V+++D FV++PTGGGKSLC+Q DQ
Sbjct: 238 FRSNQRQIMNAVVSQRDVFVMMPTGGGKSLCFQLPGLLKYNNPASVTVVIMPLVALMVDQ 297
Query: 261 IITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
I LN+ GI LNS Q+ + + L++G D +
Sbjct: 298 IEQLNI-LGIKCASLNSNQSADELNHITSLLKKG----------------------DPET 334
Query: 321 C-KLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
C L+VTPE++ +++ +LK ++ + +L F +DEAH
Sbjct: 335 CPAFLFVTPEKLKHSKTLFSLLKQIND--------------------ESRLLRFAIDEAH 374
Query: 380 CV 381
CV
Sbjct: 375 CV 376
>gi|297837387|ref|XP_002886575.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332416|gb|EFH62834.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1172
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 83/191 (43%), Gaps = 65/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------- 257
++E N ++FGN +FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 481 NLEVYNKIVFGNHSFRPNQREIINATMSGCDVFVLMPTGGGKSLTYQLPALLCAGITLVI 540
Query: 258 -------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
QDQI+ L L+ I A L++ ++ +LQEL
Sbjct: 541 SPLVSLIQDQIMNL-LQTNISAASLSAGMEWAEQLEILQELSS----------------- 582
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
+ KLLYVTPE++ ++S L+ L+ + L
Sbjct: 583 ------ENSKYKLLYVTPEKVAKSESLIRHLEILNSRS--------------------LL 616
Query: 371 AGFVVDEAHCV 381
A FV+DEAHCV
Sbjct: 617 ARFVIDEAHCV 627
>gi|332238724|ref|XP_003268551.1| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein [Nomascus
leucogenys]
Length = 1417
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 101/247 (40%), Gaps = 79/247 (31%)
Query: 167 SSKSVDCKSGVSTS-------SASSVSNKKRSSLISDNEHGTLSFEELQALD---DMEFA 216
SS +C ST+ S + +NK +L S N L E Q+L E
Sbjct: 601 SSAKTNCLPVASTAQNINFSESIQNYTNKSAQNLASRN----LKHERFQSLSFPHTKEMM 656
Query: 217 NVV--IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------DQIITLNL 266
+ FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D I L
Sbjct: 657 KIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGDTIEISPL 716
Query: 267 K------------FGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
+ IPAT+L +T S+ + +L S
Sbjct: 717 RSLIVDPVQKLTSLDIPATYLTGDKTDSETTNIYLQL----------------------S 754
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
+KD P KLLYVTPE+I + L+ L+ + + LA FV
Sbjct: 755 KKD-PIIKLLYVTPEKICASNRLISTLENLYER--------------------KLLARFV 793
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 794 IDEAHCV 800
>gi|195451292|ref|XP_002072850.1| GK13825 [Drosophila willistoni]
gi|194168935|gb|EDW83836.1| GK13825 [Drosophila willistoni]
Length = 1457
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 100/245 (40%), Gaps = 76/245 (31%)
Query: 167 SSKSVDCKSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQA-LDDMEF--------AN 217
+ +++D G STS S+ +K S S N H + + + D ++F A
Sbjct: 632 TPRTLDLTGGPSTSK--SIVSKNPSQESSGNFHSNVQNDGITGEFDGLKFDHSSRMTQAL 689
Query: 218 VVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------------- 258
FG ++FRP Q Q A++ DCFVL+PTGGGKSLCYQ
Sbjct: 690 SYSFGLKSFRPNQLQVINAALLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSL 749
Query: 259 --DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRK 316
DQ+ L I A ++ +Q++S A + ++L
Sbjct: 750 IFDQVNKL-ASLDICAKSMSGEQSMSDAMTIYRDLES----------------------- 785
Query: 317 DKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
P KLLYVTPE+I + F + L L+ I + FV+D
Sbjct: 786 HPPLVKLLYVTPEKISSSARFQDTLDTLNSNNYI--------------------SRFVID 825
Query: 377 EAHCV 381
EAHCV
Sbjct: 826 EAHCV 830
>gi|195571657|ref|XP_002103819.1| GD20640 [Drosophila simulans]
gi|194199746|gb|EDX13322.1| GD20640 [Drosophila simulans]
Length = 1473
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 92/234 (39%), Gaps = 70/234 (29%)
Query: 174 KSGVSTSSASSVSNKKRSSLISDNEH-----GTLSFEELQALDDMEFANVVIFGNRAFRP 228
KS V T S+V ++K S N H G ++ + + FG ++FRP
Sbjct: 695 KSVVPTKQTSAVDSQKLSGNFHANVHNDGITGEFDGQKFEHSTRLMHGLSYSFGLKSFRP 754
Query: 229 LQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------DQIITLNLK 267
Q Q A++ DCFVL+PTGGGKSLCYQ DQI L
Sbjct: 755 NQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFDQINKL-AS 813
Query: 268 FGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVT 327
I A L+ +Q ++ A+ ++L P KLLYVT
Sbjct: 814 LDICAKSLSGEQKMADVMAIYRDLES-----------------------QPPMVKLLYVT 850
Query: 328 PERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
PE+I + F + L L+ I + FV+DEAHCV
Sbjct: 851 PEKISSSARFQDTLDTLNSNNYI--------------------SRFVIDEAHCV 884
>gi|386312124|ref|YP_006008289.1| ATP-dependent DNA helicase RecQ [Shewanella putrefaciens 200]
gi|319424749|gb|ADV52823.1| ATP-dependent DNA helicase RecQ [Shewanella putrefaciens 200]
Length = 607
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 75/182 (41%), Gaps = 70/182 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN-------------- 265
+FG R FR Q + + QDC V++PTGGGKSLCYQ + +N
Sbjct: 20 VFGYRDFRDGQREVIERVCGGQDCLVIMPTGGGKSLCYQLPALMMNGITIVVSPLISLMK 79
Query: 266 ------LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
L+ G+ A +LNS Q+A VL++LR G
Sbjct: 80 DQVDSLLQTGVAAAYLNSSLPREQSAEVLRQLRHG------------------------- 114
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV+PER++ F E ++ L QLA F +DEAH
Sbjct: 115 ELKLLYVSPERLL-TADFIERMQSL------------------------QLAMFAIDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|1931649|gb|AAB65484.1| DNA helicase isolog; 74946-78841 [Arabidopsis thaliana]
Length = 665
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 83/190 (43%), Gaps = 65/190 (34%)
Query: 213 MEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------------- 257
++ N +FGN +FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 112 VQVNNKKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALICGGITLVIS 171
Query: 258 ------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLT 311
QDQI+ L L+ IPA L++ ++ + QEL S+H
Sbjct: 172 PLVSLIQDQIMNL-LQANIPAASLSAGMEWAEQLKIFQELN-----SEH----------- 214
Query: 312 CASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLA 371
KLLYVTPE++ + S L+ L+ +G LA
Sbjct: 215 -------SKYKLLYVTPEKVAKSDSLLRHLENLNSRG--------------------LLA 247
Query: 372 GFVVDEAHCV 381
FV+DEAHCV
Sbjct: 248 RFVIDEAHCV 257
>gi|270010585|gb|EFA07033.1| hypothetical protein TcasGA2_TC010005 [Tribolium castaneum]
Length = 1017
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 77/182 (42%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG R FRP Q + AS+ +QDCFVL+PTGGGKSLCYQ D
Sbjct: 292 FGLRHFRPHQEEIINASLTQQDCFVLMPTGGGKSLCYQLPAVLMPGVTIVISPLRALISD 351
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN IP+ L S + + Q+L +P
Sbjct: 352 QVDKLNA-LDIPSAHLCSDVKKADVDVIFQKLHV-----------------------REP 387
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+TPE++ + ++++K L+ + +LA FV+DE H
Sbjct: 388 ILKLLYLTPEKMSASGKVTDMIKSLY--------------------ARNKLARFVIDEVH 427
Query: 380 CV 381
C+
Sbjct: 428 CL 429
>gi|195501810|ref|XP_002097953.1| GE10090 [Drosophila yakuba]
gi|194184054|gb|EDW97665.1| GE10090 [Drosophila yakuba]
Length = 1490
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 113/279 (40%), Gaps = 81/279 (29%)
Query: 140 KQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVST--SSASSVSNKKRSSL---- 193
K+K+A +N+S DG + + S++ KS VS S++ SV K SS
Sbjct: 639 KRKEAPINISLDDDGFPEYDEAMFEQMHSQAAANKSAVSAVPSTSKSVVTAKLSSAPDSQ 698
Query: 194 -ISDNEHGTLSFEELQA-LDDMEFANVV--------IFGNRAFRPLQHQACKASVAKQDC 243
+S N H + + + D +F + FG ++FRP Q Q A++ DC
Sbjct: 699 KLSGNFHANVHNDGITGEFDGQKFEHSTRLMHGLSYSFGLKSFRPNQLQVINATLLGNDC 758
Query: 244 FVLLPTGGGKSLCYQ---------------------DQIITLNLKFGIPATFLNSQQTVS 282
FVL+PTGGGKSLCYQ DQI L I A L+ +Q ++
Sbjct: 759 FVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFDQINKL-ASLDICAKSLSGEQKMA 817
Query: 283 QAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLK 342
A+ ++L P KLLYVTPE+I + F + L
Sbjct: 818 DVMAIYRDLES-----------------------QPPMVKLLYVTPEKISSSARFQDTLD 854
Query: 343 CLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L+ I + FV+DEAHCV
Sbjct: 855 TLNSNNYI--------------------SRFVIDEAHCV 873
>gi|427713763|ref|YP_007062387.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
gi|427377892|gb|AFY61844.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
Length = 730
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 78/182 (42%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG AFRP Q AS+ +QD +LPTGGGKS+C+Q D
Sbjct: 11 FGYEAFRPGQADIITASLNQQDVLAILPTGGGKSICFQLPALLKTGITLVVSPLIALMLD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L K GI ATFLNS + ++A + + G V
Sbjct: 71 QVVALQ-KNGIAATFLNSTLSAAEARGRIAAIMAGEV----------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER+V + SF+ +L+ +H+ I + VVDEAH
Sbjct: 107 --KLLYVAPERLVSD-SFTALLETIHQTVGI--------------------SSIVVDEAH 143
Query: 380 CV 381
CV
Sbjct: 144 CV 145
>gi|120597203|ref|YP_961777.1| ATP-dependent DNA helicase RecQ [Shewanella sp. W3-18-1]
gi|146291576|ref|YP_001182000.1| ATP-dependent DNA helicase RecQ [Shewanella putrefaciens CN-32]
gi|120557296|gb|ABM23223.1| ATP-dependent DNA helicase RecQ [Shewanella sp. W3-18-1]
gi|145563266|gb|ABP74201.1| ATP-dependent DNA helicase RecQ [Shewanella putrefaciens CN-32]
Length = 607
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 75/182 (41%), Gaps = 70/182 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN-------------- 265
+FG R FR Q + + QDC V++PTGGGKSLCYQ + +N
Sbjct: 20 VFGYRDFRDGQREVIERICGGQDCLVIMPTGGGKSLCYQLPALMMNGITIVVSPLISLMK 79
Query: 266 ------LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
L+ G+ A +LNS Q+A VL++LR G
Sbjct: 80 DQVDSLLQTGVAAAYLNSSLPREQSAEVLRQLRHG------------------------- 114
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV+PER++ F E ++ L QLA F +DEAH
Sbjct: 115 ELKLLYVSPERLL-TADFIERMQSL------------------------QLAMFAIDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|312091032|ref|XP_003146836.1| RecQ helicase [Loa loa]
Length = 970
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 75/176 (42%), Gaps = 53/176 (30%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FR Q A A++ DCF+L+PTG GKSLCYQ +PA
Sbjct: 287 FGFNQFRHRQKHAIIAALLGYDCFILMPTGAGKSLCYQ-----------LPA-------V 328
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQL---IFVLTC------------ASRKDKPSCKLLY 325
+S+ V+ + L+ Q + +L + LT ++ P KLLY
Sbjct: 329 LSEGVTVVISPLKSLIEDQKMKMKELEICCYALTSELSQAESDRIYGMLNENSPKIKLLY 388
Query: 326 VTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
VTPE+I ++ + V LHR+G L FVVDEAHCV
Sbjct: 389 VTPEKIAASEKLNNVFHSLHRRG--------------------LLTRFVVDEAHCV 424
>gi|393911582|gb|EJD76373.1| CBR-HIM-6 protein [Loa loa]
Length = 1044
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 75/176 (42%), Gaps = 53/176 (30%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FR Q A A++ DCF+L+PTG GKSLCYQ +PA
Sbjct: 287 FGFNQFRHRQKHAIIAALLGYDCFILMPTGAGKSLCYQ-----------LPA-------V 328
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQL---IFVLTC------------ASRKDKPSCKLLY 325
+S+ V+ + L+ Q + +L + LT ++ P KLLY
Sbjct: 329 LSEGVTVVISPLKSLIEDQKMKMKELEICCYALTSELSQAESDRIYGMLNENSPKIKLLY 388
Query: 326 VTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
VTPE+I ++ + V LHR+G L FVVDEAHCV
Sbjct: 389 VTPEKIAASEKLNNVFHSLHRRG--------------------LLTRFVVDEAHCV 424
>gi|224070434|ref|XP_002303149.1| predicted protein [Populus trichocarpa]
gi|222840581|gb|EEE78128.1| predicted protein [Populus trichocarpa]
Length = 1194
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 83/190 (43%), Gaps = 65/190 (34%)
Query: 213 MEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------------- 257
+E N +FGN +FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 446 LEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALVCPGITLVIS 505
Query: 258 ------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLT 311
QDQI+ L L+ IPA +L++ ++ +L+EL
Sbjct: 506 PLVSLIQDQIMHL-LQANIPAAYLSANMEWTEQQEILREL-------------------- 544
Query: 312 CASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLA 371
C+ D +LLYVTPE++ + L+ L+ +G LA
Sbjct: 545 CS---DYCKYRLLYVTPEKVAKSDVLLRNLESLNGRG--------------------LLA 581
Query: 372 GFVVDEAHCV 381
V+DEAHCV
Sbjct: 582 RIVIDEAHCV 591
>gi|373947884|ref|ZP_09607845.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS183]
gi|386326268|ref|YP_006022385.1| ATP-dependent DNA helicase RecQ [Shewanella baltica BA175]
gi|333820413|gb|AEG13079.1| ATP-dependent DNA helicase RecQ [Shewanella baltica BA175]
gi|373884484|gb|EHQ13376.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS183]
Length = 607
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 78/183 (42%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FR Q + + QDC V++PTGGGKSLCYQ
Sbjct: 20 VFGYRDFRDGQREVIERVCGGQDCLVIMPTGGGKSLCYQLPALLMDGITIVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L L+ G+ A +LNS Q+A VL++LR G
Sbjct: 80 DQVDSL-LQTGVAAAYLNSSLPREQSAEVLRQLRHG------------------------ 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ + F E ++ L QLA F +DEA
Sbjct: 115 -ELKLLYVSPERLL-SADFIERMQSL------------------------QLAMFAIDEA 148
Query: 379 HCV 381
HC+
Sbjct: 149 HCI 151
>gi|152998934|ref|YP_001364615.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS185]
gi|151363552|gb|ABS06552.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS185]
Length = 607
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 78/183 (42%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FR Q + + QDC V++PTGGGKSLCYQ
Sbjct: 20 VFGYRDFRDGQREVIERVCGGQDCLVIMPTGGGKSLCYQLPALLMDGITIVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L L+ G+ A +LNS Q+A VL++LR G
Sbjct: 80 DQVDSL-LQTGVAAAYLNSSLPREQSAEVLRQLRHG------------------------ 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ + F E ++ L QLA F +DEA
Sbjct: 115 -ELKLLYVSPERLL-SADFIERMQSL------------------------QLAMFAIDEA 148
Query: 379 HCV 381
HC+
Sbjct: 149 HCI 151
>gi|217971615|ref|YP_002356366.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS223]
gi|217496750|gb|ACK44943.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS223]
Length = 607
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 78/183 (42%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FR Q + + QDC V++PTGGGKSLCYQ
Sbjct: 20 VFGYRDFRDGQREVIERVCGGQDCLVIMPTGGGKSLCYQLPALLMDGITIVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L L+ G+ A +LNS Q+A VL++LR G
Sbjct: 80 DQVDSL-LQTGVAAAYLNSSLPREQSAEVLRQLRHG------------------------ 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ + F E ++ L QLA F +DEA
Sbjct: 115 -ELKLLYVSPERLL-SADFIERMQSL------------------------QLAMFAIDEA 148
Query: 379 HCV 381
HC+
Sbjct: 149 HCI 151
>gi|160873520|ref|YP_001552836.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS195]
gi|378706760|ref|YP_005271654.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS678]
gi|418025211|ref|ZP_12664191.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS625]
gi|160859042|gb|ABX47576.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS195]
gi|315265749|gb|ADT92602.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS678]
gi|353535624|gb|EHC05186.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS625]
Length = 607
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 78/183 (42%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FR Q + + QDC V++PTGGGKSLCYQ
Sbjct: 20 VFGYRDFRDGQREVIERVCGGQDCLVIMPTGGGKSLCYQLPALLMDGITIVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L L+ G+ A +LNS Q+A VL++LR G
Sbjct: 80 DQVDSL-LQTGVAAAYLNSSLPREQSAEVLRQLRHG------------------------ 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ + F E ++ L QLA F +DEA
Sbjct: 115 -ELKLLYVSPERLL-SADFIERMQSL------------------------QLAMFAIDEA 148
Query: 379 HCV 381
HC+
Sbjct: 149 HCI 151
>gi|429961617|gb|ELA41162.1| RecQ family ATP-dependent DNA helicase [Vittaforma corneae ATCC
50505]
Length = 733
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 78/183 (42%), Gaps = 66/183 (36%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F FR Q + KA++ K+D FVL+PTGGGKSLCYQ
Sbjct: 166 VFNLENFRGNQEEIIKAALNKEDIFVLMPTGGGKSLCYQLPAMIQDGLTVVISPLLSLIH 225
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L L IPA LNS T S+ +++ L+ C
Sbjct: 226 DQVSNL-LNKNIPAVALNSNCTYSERTLIMKTLQ------------------ACH----- 261
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
S K++YVTPE + + FS +L L R+G +L FV+DEA
Sbjct: 262 -SVKIVYVTPELLNKSTQFSNILHELDRRG--------------------RLCRFVIDEA 300
Query: 379 HCV 381
HCV
Sbjct: 301 HCV 303
>gi|126172636|ref|YP_001048785.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS155]
gi|386339411|ref|YP_006035777.1| RecQ familyATP-dependent DNA helicase [Shewanella baltica OS117]
gi|125995841|gb|ABN59916.1| ATP-dependent DNA helicase RecQ [Shewanella baltica OS155]
gi|334861812|gb|AEH12283.1| ATP-dependent DNA helicase, RecQ family [Shewanella baltica OS117]
Length = 607
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 78/183 (42%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FR Q + + QDC V++PTGGGKSLCYQ
Sbjct: 20 VFGYRDFRDGQREVIERVCGGQDCLVIMPTGGGKSLCYQLPALLMDGITIVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L L+ G+ A +LNS Q+A VL++LR G
Sbjct: 80 DQVDSL-LQTGVAAAYLNSSLPREQSAEVLRQLRHG------------------------ 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ + F E ++ L QLA F +DEA
Sbjct: 115 -ELKLLYVSPERLL-SADFIERMQSL------------------------QLAMFAIDEA 148
Query: 379 HCV 381
HC+
Sbjct: 149 HCI 151
>gi|242764771|ref|XP_002340840.1| RecQ family helicase MusN [Talaromyces stipitatus ATCC 10500]
gi|218724036|gb|EED23453.1| RecQ family helicase MusN [Talaromyces stipitatus ATCC 10500]
Length = 1574
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 76/186 (40%), Gaps = 67/186 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------- 258
F + FRP Q +A A++ +D FVL+PTGGGKSLCYQ
Sbjct: 700 FHLKGFRPNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPSVIHSGRTKGVTIVVSPLLS 759
Query: 259 ---DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
DQ+ L K GI A F+N T V+ LS + +L
Sbjct: 760 LMEDQVDHLQ-KLGIKAFFINGDVTPEHKRWVMS------ALSSPFADREL--------- 803
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
+LLYVTPE + N + ++LK LH R+LA V+
Sbjct: 804 ------ELLYVTPEMVNKNLTLRDILKTLH--------------------ANRKLARLVI 837
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 838 DEAHCV 843
>gi|386285117|ref|ZP_10062335.1| ATP-dependent DNA helicase RecQ [Sulfurovum sp. AR]
gi|385343970|gb|EIF50688.1| ATP-dependent DNA helicase RecQ [Sulfurovum sp. AR]
Length = 594
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 77/182 (42%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG+ +FRPLQ + A +AKQD ++LPTGGGKSLCYQ D
Sbjct: 11 FGHSSFRPLQEEVVDAILAKQDVLMILPTGGGKSLCYQLPTLLMEGITVVVSPLLALMHD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L + GI A L+S Q + ++ + LR G
Sbjct: 71 QVVALK-ENGIAAEMLSSMQDLEESQQIETRLRAG------------------------- 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER+ N F L LH+ LP + FV+DEAH
Sbjct: 105 EIKLLYVAPERLT-NAYF---LNLLHQ---------------LP------INFFVIDEAH 139
Query: 380 CV 381
CV
Sbjct: 140 CV 141
>gi|242013217|ref|XP_002427311.1| blooms syndrome DNA helicase, putative [Pediculus humanus corporis]
gi|212511652|gb|EEB14573.1| blooms syndrome DNA helicase, putative [Pediculus humanus corporis]
Length = 1152
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 75/177 (42%), Gaps = 55/177 (31%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG ++FR Q Q A++ DCFVL+PTGGGKSLCYQ +PA
Sbjct: 403 FGLKSFRTNQLQVMNAALLGHDCFVLMPTGGGKSLCYQ-----------LPA-------I 444
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD----------------KPSCKLL 324
VSQ V+ + L+L Q L L + C D +P KLL
Sbjct: 445 VSQGVTVVISPLRSLILDQVTKLVTLD-IKACHLSGDVKESEVVDIYRKLNMPEPEIKLL 503
Query: 325 YVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
YVTPE++ + S + L+ + LA FV+DEAHCV
Sbjct: 504 YVTPEKVGASTSLRNIFSRLYNRN--------------------MLARFVIDEAHCV 540
>gi|356528815|ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
Length = 1160
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 81/191 (42%), Gaps = 65/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------- 257
++E N +FGN +FRP Q + AS++ D FVL+PTGGGKSL Y
Sbjct: 397 ELEVNNKKVFGNHSFRPNQREIINASMSGCDVFVLMPTGGGKSLTYQLPALIRPGITLVI 456
Query: 258 -------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
QDQI+ L L+ IPA +L++ ++ +L+EL
Sbjct: 457 SPLVSLIQDQIMHL-LQANIPAAYLSANMEWAEQQEILRELNS----------------- 498
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
D KLLYVTPE++ + + L LH + L
Sbjct: 499 ------DYCKYKLLYVTPEKVARSDNLLRHLDNLHFR--------------------ELL 532
Query: 371 AGFVVDEAHCV 381
A V+DEAHCV
Sbjct: 533 ARIVIDEAHCV 543
>gi|384253210|gb|EIE26685.1| ATP-dependent DNA helicase, partial [Coccomyxa subellipsoidea
C-169]
Length = 513
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 77/190 (40%), Gaps = 65/190 (34%)
Query: 213 MEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------------- 257
+ AN FGN +FRP Q +A A++ DCFVL+PTGGGKSLCY
Sbjct: 1 LAIANEDFFGNASFRPNQLEAINATIKGNDCFVLMPTGGGKSLCYQLPALLTNGVTVVIS 60
Query: 258 ------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLT 311
QDQ+ L + GI +L+ Q + +++Q L+Q
Sbjct: 61 PLVSLIQDQVFHLQ-QAGIACGYLSGTQDYEDSRSIMQRLQQ------------------ 101
Query: 312 CASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLA 371
P ++L+VTPE++ + L LH + R L
Sbjct: 102 -----TPPDIRVLFVTPEKVARSDYLMRTLDVLHSR--------------------RLLD 136
Query: 372 GFVVDEAHCV 381
VDEAHCV
Sbjct: 137 RVAVDEAHCV 146
>gi|341891934|gb|EGT47869.1| hypothetical protein CAEBREN_30811 [Caenorhabditis brenneri]
Length = 978
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 73/164 (44%), Gaps = 29/164 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FR Q Q +++ D FVL+PTG GKSLCYQ + L G+ +
Sbjct: 234 FGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILP---GVTVVVSPLRSL 290
Query: 281 VSQAAAVLQELRQG---LVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSF 337
+ ++EL G L H+ I+ + + P+ KLLYVTPE+I +
Sbjct: 291 IEDQKMKMKELGIGCEALTADLTASAHEEIYSDLSS---ENPTIKLLYVTPEKISASGRL 347
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
S V LHR+G LA FV+DEAHCV
Sbjct: 348 SSVFYTLHRRG--------------------LLARFVIDEAHCV 371
>gi|194744401|ref|XP_001954683.1| GF16620 [Drosophila ananassae]
gi|190627720|gb|EDV43244.1| GF16620 [Drosophila ananassae]
Length = 1512
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-PATFLNSQ 278
FG ++FRP Q Q AS+ DCFVL+PTGGGKSLCYQ I+T + I P L
Sbjct: 685 FGLKSFRPNQLQVINASLLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFD 744
Query: 279 QTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFS 338
QT A L + L Q I+ A P KLLYVTPE+I + F
Sbjct: 745 QT--NKLASLDICAKSLSGEQKLADAMAIYRDLEAQ---PPMVKLLYVTPEKISSSARFQ 799
Query: 339 EVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ L L+ I + FV+DEAHCV
Sbjct: 800 DTLDTLNANNYI--------------------SRFVIDEAHCV 822
>gi|356541884|ref|XP_003539402.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
Length = 1534
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 81/191 (42%), Gaps = 65/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------- 257
++E N +FGN +FRP Q + AS++ D FVL+PTGGGKSL Y
Sbjct: 771 ELEVNNKKVFGNHSFRPNQREIINASMSGCDVFVLMPTGGGKSLTYQLPALIHPGITLVI 830
Query: 258 -------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
QDQI+ L L+ IPA +L++ ++ +L+EL
Sbjct: 831 SPLVSLIQDQIMHL-LQANIPAAYLSANMEWTEQQDILRELNS----------------- 872
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
D KLLYVTPE++ + + L LH + L
Sbjct: 873 ------DYCKYKLLYVTPEKVARSDNLLRHLDNLHFR--------------------ELL 906
Query: 371 AGFVVDEAHCV 381
A V+DEAHCV
Sbjct: 907 ARIVIDEAHCV 917
>gi|24646066|ref|NP_524319.2| bloom syndrome helicase ortholog [Drosophila melanogaster]
gi|17366114|sp|Q9VGI8.1|BLM_DROME RecName: Full=Bloom syndrome protein homolog; Short=Dmblm; AltName:
Full=Mutagen-sensitive protein 309; AltName: Full=RecQ
helicase homolog
gi|7299503|gb|AAF54691.1| bloom syndrome helicase ortholog [Drosophila melanogaster]
Length = 1487
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 113/280 (40%), Gaps = 82/280 (29%)
Query: 140 KQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVST----SSASSVSNKKRSSL-- 193
K K+ +N+S DG + + S++ KS VS+ +S S V K+ S+L
Sbjct: 635 KHKETPINISLDDDGFPEYDEAMFEQMHSQAAANKSRVSSAGPSTSKSVVPTKQTSALHS 694
Query: 194 --ISDNEHGTLSFEELQA-LDDMEFANVV--------IFGNRAFRPLQHQACKASVAKQD 242
+S N H + + + D +F + FG ++FRP Q Q A++ D
Sbjct: 695 QKLSGNFHANVHNDGITGEFDGQKFEHSTRLMHGLSYSFGLKSFRPNQLQVINATLLGND 754
Query: 243 CFVLLPTGGGKSLCYQ---------------------DQIITLNLKFGIPATFLNSQQTV 281
CFVL+PTGGGKSLCYQ DQI L I A L+ +Q +
Sbjct: 755 CFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFDQINKL-ASLDICAKSLSGEQKM 813
Query: 282 SQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVL 341
+ A+ ++L P KLLYVTPE+I + F + L
Sbjct: 814 ADVMAIYRDLES-----------------------QPPMVKLLYVTPEKISSSARFQDTL 850
Query: 342 KCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L+ I + FV+DEAHCV
Sbjct: 851 DTLNSNNYI--------------------SRFVIDEAHCV 870
>gi|429964145|gb|ELA46143.1| RecQ family ATP-dependent DNA helicase [Vavraia culicis
'floridensis']
Length = 955
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 82/245 (33%)
Query: 176 GVSTSSASSVSNKKRS--------SLISDNEHGTLSF---------EELQALDDMEFANV 218
G S++ S SN ++ S++S+ GT +F + +Q+ D++ + +
Sbjct: 389 GTSSTIGKSTSNDEKVGSTDCNTVSILSNTMTGTSTFYDQFNDAIPDTVQSTDNILYRTL 448
Query: 219 V-IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------------- 257
IF ++FRP Q + A + ++D FVL+PTGGGKSLCY
Sbjct: 449 TEIFKLKSFRPNQEEIINAVLDEKDVFVLMPTGGGKSLCYFLPALLTDRVTVVISPLLSL 508
Query: 258 -QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRK 316
+DQI L L+ I + LNS TV + V + LR+GL +
Sbjct: 509 IEDQIQEL-LRLNISSLTLNSGMTVKERNVVFRVLREGLRVGNV---------------- 551
Query: 317 DKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
+ K+L++TPE +V + + +LK +A V+D
Sbjct: 552 -RKRVKILFLTPETLVQSHALQGILKG-------------------------NIARVVID 585
Query: 377 EAHCV 381
EAHCV
Sbjct: 586 EAHCV 590
>gi|5281068|gb|AAD41441.1|U92536_1 RECQ helicase homolog [Drosophila melanogaster]
Length = 1487
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 113/280 (40%), Gaps = 82/280 (29%)
Query: 140 KQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVST----SSASSVSNKKRSSL-- 193
K K+ +N+S DG + + S++ KS VS+ +S S V K+ S+L
Sbjct: 635 KHKETPINISLDDDGFPEYDEAMFEQMHSQAAANKSRVSSAGPSTSKSVVPTKQTSALHS 694
Query: 194 --ISDNEHGTLSFEELQA-LDDMEFANVV--------IFGNRAFRPLQHQACKASVAKQD 242
+S N H + + + D +F + FG ++FRP Q Q A++ D
Sbjct: 695 QKLSGNFHANVHNDGITGEFDGQKFEHSTRLMHGLSYSFGLKSFRPNQLQVINATLLGND 754
Query: 243 CFVLLPTGGGKSLCYQ---------------------DQIITLNLKFGIPATFLNSQQTV 281
CFVL+PTGGGKSLCYQ DQI L I A L+ +Q +
Sbjct: 755 CFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFDQINKL-ASLDICAESLSGEQKM 813
Query: 282 SQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVL 341
+ A+ ++L P KLLYVTPE+I + F + L
Sbjct: 814 ADVMAIYRDLES-----------------------QPPMVKLLYVTPEKISSSARFQDTL 850
Query: 342 KCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L+ I + FV+DEAHCV
Sbjct: 851 DTLNSNNYI--------------------SRFVIDEAHCV 870
>gi|284006614|emb|CBA71875.1| ATP-dependent DNA helicase [Arsenophonus nasoniae]
Length = 608
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 63/134 (47%), Gaps = 47/134 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
IFG + FRP Q Q + KQDC V++PTGGGKSLCYQ
Sbjct: 20 IFGYQQFRPGQEQIINTILTKQDCLVVMPTGGGKSLCYQIPALILPGLTIVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L+ ++GI A++LNS QT Q V++ RQG +
Sbjct: 80 DQVDQLS-QYGIEASYLNSSQTGQQQKQVIEYCRQGKI---------------------- 116
Query: 319 PSCKLLYVTPERIV 332
KLLY+ PER+V
Sbjct: 117 ---KLLYIAPERLV 127
>gi|212529002|ref|XP_002144658.1| RecQ family helicase MusN [Talaromyces marneffei ATCC 18224]
gi|210074056|gb|EEA28143.1| RecQ family helicase MusN [Talaromyces marneffei ATCC 18224]
Length = 1573
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 75/186 (40%), Gaps = 67/186 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------- 258
F + FRP Q +A A++ +D FVL+PTGGGKSLCYQ
Sbjct: 701 FHLKGFRPHQLEAINATLGGKDAFVLMPTGGGKSLCYQLPSVIHSGRTKGVTIVVSPLLS 760
Query: 259 ---DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
DQ+ L K GI A F+N G V S+H A R
Sbjct: 761 LMEDQVDHLQ-KLGIKAYFIN-----------------GDVSSEHKRWVMSALASPYADR 802
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
+ +LLYVTPE I N + ++LK LH R+ A V+
Sbjct: 803 E----IELLYVTPEMINKNVTLCDILKTLHD--------------------NRKFARLVI 838
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 839 DEAHCV 844
>gi|384487467|gb|EIE79647.1| hypothetical protein RO3G_04352 [Rhizopus delemar RA 99-880]
Length = 692
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 70/181 (38%), Gaps = 68/181 (37%)
Query: 226 FRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------------------QDQ 260
FRP Q +A ++ D FVL+PTGGGKSLCY QDQ
Sbjct: 165 FRPNQLEAINTTLNGDDVFVLMPTGGGKSLCYQLPAIIQRYKTQGVTFVVSPLLSLMQDQ 224
Query: 261 IITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
+ L GI A LNS T Q + L Q D P+
Sbjct: 225 VEQLVKGRGIAAGMLNSSVTAEQKKWIYNNLYQ-----------------------DTPT 261
Query: 321 CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
+LLY+TPE + + V+ LHR+ +LA FV+DEAHC
Sbjct: 262 LQLLYITPELMSKSDQLRNVMDSLHRRN--------------------KLARFVIDEAHC 301
Query: 381 V 381
V
Sbjct: 302 V 302
>gi|319945102|ref|ZP_08019364.1| ATP-dependent helicase RecQ [Lautropia mirabilis ATCC 51599]
gi|319741672|gb|EFV94097.1| ATP-dependent helicase RecQ [Lautropia mirabilis ATCC 51599]
Length = 607
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 74/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG AFR LQH + + VL+PTGGGKSLCY Q
Sbjct: 10 VFGYPAFRGLQHDIIEHVAGGGNALVLMPTGGGKSLCYQIPALMREGVGIVVSPLIALMQ 69
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A +LNS + ++AA + ++LRQG
Sbjct: 70 DQVAALR-ELGVAAAYLNSSLSAAEAADIERQLRQG------------------------ 104
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PER+ LT + L H C QLA +DEA
Sbjct: 105 -ELKLLYVAPERL-----------------------LTERCLALLHRC--QLALIAIDEA 138
Query: 379 HCV 381
HCV
Sbjct: 139 HCV 141
>gi|428184545|gb|EKX53400.1| hypothetical protein GUITHDRAFT_64555, partial [Guillardia theta
CCMP2712]
Length = 513
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 80/164 (48%), Gaps = 29/164 (17%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQ 278
IF +FRPLQ + A +AK+D FVLLPTGGGKSLCYQ II + I Q
Sbjct: 2 IFNLSSFRPLQLEIINAFLAKKDVFVLLPTGGGKSLCYQLPAIIIPGIMVVISPLLSLMQ 61
Query: 279 QTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSC--KLLYVTPERIVGNQS 336
V Q A+ E ++LS ++ VL + K SC KLLYVTPERI ++
Sbjct: 62 DQVEQLRALGVEC---MMLSSATSKEEMREVLGAMT---KGSCKLKLLYVTPERISKSRL 115
Query: 337 FSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
F L+ H QR ++ FV+DEAHC
Sbjct: 116 FLSKLE-------------------QAHDMQR-ISSFVIDEAHC 139
>gi|429855219|gb|ELA30187.1| RecQ family ATP-dependent DNA helicase [Colletotrichum
gloeosporioides Nara gc5]
Length = 1695
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 77/168 (45%), Gaps = 31/168 (18%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATF 274
F R FRP Q +A A++A +D FVL+PTGGGKSLCYQ II GI P
Sbjct: 798 FRMRGFRPNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAIINSGKTRGITIVVSPLLS 857
Query: 275 LNSQQTVSQAAAVLQELR-QGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVG 333
L Q +A +Q + G SQ IF + R + +LLYVTPE +
Sbjct: 858 LMQDQVDHMSALNIQAVSLNGETTSQK---RNQIFS-SFKERSPELFVQLLYVTPEMLNN 913
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ SF + L LH ++LA V+DEAHCV
Sbjct: 914 SPSFMKALTTLH--------------------SGKRLARIVIDEAHCV 941
>gi|402583828|gb|EJW77771.1| hypothetical protein WUBG_11320 [Wuchereria bancrofti]
Length = 479
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 70/164 (42%), Gaps = 29/164 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FR Q A A++ DCF+L+PTG GKSLCYQ I L GI +
Sbjct: 288 FGFNQFRHRQKHAIIAALLGYDCFILMPTGAGKSLCYQLPAI---LSKGITVVISPLKSL 344
Query: 281 VSQAAAVLQELR---QGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSF 337
+ ++EL L I+ + S P KLLYVTPE+I ++
Sbjct: 345 IEDQKMKMRELEICCYALTSELSQAESDRIYSMLNESF---PKIKLLYVTPEKIAASEKL 401
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ V LHR+G L FVVDEAHCV
Sbjct: 402 NNVFFSLHRRG--------------------LLTRFVVDEAHCV 425
>gi|348506232|ref|XP_003440664.1| PREDICTED: Bloom syndrome protein homolog [Oreochromis niloticus]
Length = 1403
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 79/182 (43%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +D FVL+PTGGGKSLCYQ D
Sbjct: 654 FGLHQFRFNQLEAINAALLGEDAFVLMPTGGGKSLCYQLPACVSLGVTVVVSPLKSLIVD 713
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L IPAT L+ ++ S+A+ + +L SRKD P
Sbjct: 714 QVQKLTT-LDIPATSLSGDKSDSEASRIYMQL----------------------SRKD-P 749
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ +G LA F++DEAH
Sbjct: 750 IIKLLYVTPEKLSASNRLISALQNLYERG--------------------LLARFIIDEAH 789
Query: 380 CV 381
CV
Sbjct: 790 CV 791
>gi|194901954|ref|XP_001980516.1| GG17198 [Drosophila erecta]
gi|190652219|gb|EDV49474.1| GG17198 [Drosophila erecta]
Length = 1457
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 74/182 (40%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG ++FRP Q Q A++ DCFVL+PTGGGKSLCYQ D
Sbjct: 703 FGLKSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFD 762
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
QI L I A L+ +Q ++ A+ ++L P
Sbjct: 763 QINKL-ASLDICAKSLSGEQKMADVMAIYRDLES-----------------------QPP 798
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + F + L L+ I + FV+DEAH
Sbjct: 799 MVKLLYVTPEKISSSARFQDTLDTLNSNNYI--------------------SRFVIDEAH 838
Query: 380 CV 381
CV
Sbjct: 839 CV 840
>gi|30690461|ref|NP_195299.2| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
gi|75334307|sp|Q9FT72.1|RQL3_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 3; AltName:
Full=RecQ-like protein 3; Short=AtRecQ3; Short=AtRecQl3
gi|11121447|emb|CAC14867.1| DNA Helicase [Arabidopsis thaliana]
gi|332661156|gb|AEE86556.1| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
Length = 713
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 66/182 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG+ FR Q +A +A V+ +DCF L+PTGGGKS+CYQ +
Sbjct: 32 FGHADFRGKQLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPGIVLVVSPLIALMEN 91
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L K GI A +L+S Q + ++L G KP
Sbjct: 92 QVMALKEK-GIAAEYLSSTQATHVKNKIHEDLDSG-----------------------KP 127
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
S +LLYVTPE ++ + F L+ LH +G + L +DEAH
Sbjct: 128 SVRLLYVTPE-LIATKGFMLKLRKLHSRGLLNL--------------------IAIDEAH 166
Query: 380 CV 381
C+
Sbjct: 167 CI 168
>gi|157278040|ref|NP_001098120.1| Bloom syndrome helicase [Oryzias latipes]
gi|140083401|gb|ABO84823.1| Bloom syndrome helicase [Oryzias latipes]
Length = 1393
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 78/182 (42%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +D FVL+PTGGGKSLCYQ D
Sbjct: 642 FGLHQFRFNQLEAINAALLGEDAFVLMPTGGGKSLCYQLPACVSPGVTVVVSPLKSLIVD 701
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
QI L IPAT L+ ++ S+A + +L SRKD P
Sbjct: 702 QIQKLTT-LDIPATSLSGDKSDSEAGRIYMQL----------------------SRKD-P 737
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ +G LA F++DEAH
Sbjct: 738 LIKLLYVTPEKVSASGRLISALQNLYERG--------------------LLARFIIDEAH 777
Query: 380 CV 381
CV
Sbjct: 778 CV 779
>gi|357445423|ref|XP_003592989.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
gi|355482037|gb|AES63240.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
Length = 1156
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 81/191 (42%), Gaps = 65/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------- 257
++E N +FGN +FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 395 ELEVNNKKVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALINPGITLVI 454
Query: 258 -------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
QDQI+ L L+ IPA +L++ ++ +L+EL
Sbjct: 455 SPLVSLIQDQIMHL-LQANIPAAYLSANLEWAEQQEILREL------------------- 494
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
D KLLYVTPE++ + L+ LH + L
Sbjct: 495 ----NSDYCKYKLLYVTPEKVARSDVLLRQLESLHGR--------------------ELL 530
Query: 371 AGFVVDEAHCV 381
+ V+DEAHCV
Sbjct: 531 SRIVIDEAHCV 541
>gi|297738545|emb|CBI27790.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 66/182 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG+ FR Q +A +A ++ +DCF L+PTGGGKS+CYQ +
Sbjct: 32 FGHAEFRGRQLEAIEAILSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVCPLIALMEN 91
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L K GI A FL+S QT + ++L+ G KP
Sbjct: 92 QVMALKEK-GIAAEFLSSTQTTKVRDKIHEDLQSG-----------------------KP 127
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
S +LLYVTPE ++ F L +H +G + L +DEAH
Sbjct: 128 SLRLLYVTPE-LIATPGFMSRLTKIHARGLLNL--------------------IAIDEAH 166
Query: 380 CV 381
C+
Sbjct: 167 CI 168
>gi|357450081|ref|XP_003595317.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
gi|355484365|gb|AES65568.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
Length = 776
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 77/182 (42%), Gaps = 66/182 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR LQ +A +A ++ +DCF L+PTGGGKS+CYQ +
Sbjct: 38 FGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIVLVVCPLIALMEN 97
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L K GI A FL+S +T + ++L G KP
Sbjct: 98 QVMALKEK-GIAAEFLSSTKTAKAKDKIHEDLGSG-----------------------KP 133
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
S +LLYVTPE ++ F L +H +G + L +DEAH
Sbjct: 134 STRLLYVTPE-LIATPGFMSKLTKIHSRGLLSL--------------------IAIDEAH 172
Query: 380 CV 381
C+
Sbjct: 173 CI 174
>gi|330795187|ref|XP_003285656.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
gi|325084382|gb|EGC37811.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
Length = 529
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 74/173 (42%), Gaps = 39/173 (22%)
Query: 217 NVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLN 276
N FG FR Q + + + +D FVL+PTGGGKSLCYQ IP +
Sbjct: 1 NKKTFGFNQFRENQREIINSVLDSKDTFVLMPTGGGKSLCYQ-----------IPGLYQQ 49
Query: 277 SQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS--------RKDKPSCKLLYVTP 328
V L E + +L+ Y L +T R + P +LLYVTP
Sbjct: 50 GVTIVVSPLISLIEDQVKFLLALDYPAAALCSGITSDDAKKVFRDLRSNSPKTRLLYVTP 109
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
ER+ N++F ++L L++KG + V+DEAHCV
Sbjct: 110 ERVASNETFMDILGDLYQKG--------------------KFMRIVIDEAHCV 142
>gi|195329754|ref|XP_002031575.1| GM26077 [Drosophila sechellia]
gi|194120518|gb|EDW42561.1| GM26077 [Drosophila sechellia]
Length = 1268
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 113/280 (40%), Gaps = 82/280 (29%)
Query: 140 KQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVST----SSASSVSNKKRSSL-- 193
K K+ +N+S DG + + S++ KS VS+ +S S V+ K+ +L
Sbjct: 416 KHKETPINISLDDDGFPEYDEAMFEQMHSQAAANKSRVSSAGPSTSKSVVATKQTGALDS 475
Query: 194 --ISDNEHGTLSFEELQA-LDDMEFANVV--------IFGNRAFRPLQHQACKASVAKQD 242
+S N H + + + D +F + FG ++FRP Q Q A++ D
Sbjct: 476 QKLSGNFHANVHNDGITGEFDGQKFEHSTRLMHGLSYSFGLKSFRPNQLQVINATLLGND 535
Query: 243 CFVLLPTGGGKSLCYQ---------------------DQIITLNLKFGIPATFLNSQQTV 281
CFVL+PTGGGKSLCYQ DQI L I A L+ +Q +
Sbjct: 536 CFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFDQINKL-ASLDICAKSLSGEQKM 594
Query: 282 SQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVL 341
+ A+ ++L P KLLYVTPE+I + F + L
Sbjct: 595 ADVMAIYRDLES-----------------------QPPMVKLLYVTPEKISSSARFQDTL 631
Query: 342 KCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L+ I + FV+DEAHCV
Sbjct: 632 DTLNSNNYI--------------------SRFVIDEAHCV 651
>gi|119193364|ref|XP_001247288.1| hypothetical protein CIMG_01059 [Coccidioides immitis RS]
gi|392863466|gb|EAS35781.2| RecQ family ATP-dependent DNA helicase [Coccidioides immitis RS]
Length = 1569
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 82/195 (42%), Gaps = 67/195 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++ A IF R FRP Q +A A+++ +D FVL+PTGGGKSLCYQ
Sbjct: 696 DVKAALRDIFNLRGFRPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVVQSGRTRGV 755
Query: 259 ------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
DQ+ L + A F+N ++ +L+ L+ V Q
Sbjct: 756 TVVISPLLSLMDDQVGQLR-SLSVKAHFINGSLKAAERRQILEYLQDPRVEDQ------- 807
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
+LLYVTPE + +Q+ + L+ LHR+
Sbjct: 808 --------------IQLLYVTPEMVNKSQAMLDTLRQLHRR------------------- 834
Query: 367 QRQLAGFVVDEAHCV 381
++ A V+DEAHCV
Sbjct: 835 -KKFARLVIDEAHCV 848
>gi|225444694|ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Vitis
vinifera]
Length = 730
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 66/182 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG+ FR Q +A +A ++ +DCF L+PTGGGKS+CYQ +
Sbjct: 32 FGHAEFRGRQLEAIEAILSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVCPLIALMEN 91
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L K GI A FL+S QT + ++L+ G KP
Sbjct: 92 QVMALKEK-GIAAEFLSSTQTTKVRDKIHEDLQSG-----------------------KP 127
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
S +LLYVTPE ++ F L +H +G + L +DEAH
Sbjct: 128 SLRLLYVTPE-LIATPGFMSRLTKIHARGLLNL--------------------IAIDEAH 166
Query: 380 CV 381
C+
Sbjct: 167 CI 168
>gi|320040058|gb|EFW21992.1| RecQ helicase MUSN [Coccidioides posadasii str. Silveira]
Length = 1569
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 82/195 (42%), Gaps = 67/195 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++ A IF R FRP Q +A A+++ +D FVL+PTGGGKSLCYQ
Sbjct: 696 DVKAALRDIFNLRGFRPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVVQSGRTRGV 755
Query: 259 ------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
DQ+ L + A F+N ++ +L+ L+ V Q
Sbjct: 756 TVVISPLLSLMDDQVGQLR-SLSVKAHFINGSLKAAERRQILEYLQDPRVEDQ------- 807
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
+LLYVTPE + +Q+ + L+ LHR+
Sbjct: 808 --------------IQLLYVTPEMVNKSQAMLDTLRQLHRR------------------- 834
Query: 367 QRQLAGFVVDEAHCV 381
++ A V+DEAHCV
Sbjct: 835 -KKFARLVIDEAHCV 848
>gi|167535712|ref|XP_001749529.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771921|gb|EDQ85580.1| predicted protein [Monosiga brevicollis MX1]
Length = 2199
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 77/182 (42%), Gaps = 66/182 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG FRP Q +A A++ QDCFVL+PTGGGKSLCY QD
Sbjct: 605 FGLHRFRPHQLEAVNAALLGQDCFVLMPTGGGKSLCYQLPAVTSRGVTVVISPLISLIQD 664
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GI FL+S Q+ ++ V ++L CA D
Sbjct: 665 QVAGLQ-ALGIRVLFLSSTQSRAEQNEVHRQL--------------------CA---DAV 700
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
LLY+TPER+ + + + LH +G LA FV+DEAH
Sbjct: 701 QDDLLYITPERLKSSM-MRQTFESLHARG--------------------LLARFVIDEAH 739
Query: 380 CV 381
CV
Sbjct: 740 CV 741
>gi|168052509|ref|XP_001778692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669907|gb|EDQ56485.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 521
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 80/190 (42%), Gaps = 67/190 (35%)
Query: 213 MEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-------------- 258
M+ N FGN++FR Q + A+++ +D FVL+PTGGGKSL YQ
Sbjct: 2 MQVNNKKFFGNKSFRLNQREIINATMSGRDVFVLMPTGGGKSLTYQLPAICSAGVTLVVS 61
Query: 259 -------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLT 311
DQI+ L+ + IPA +L+ + +L+ L G+
Sbjct: 62 PLVSLIMDQIMHLS-EANIPAAYLSGTMEWQEQNEILRNLDAGVY--------------- 105
Query: 312 CASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLA 371
KLLYVTPE+I + S+ L L+ QR LA
Sbjct: 106 ----------KLLYVTPEKIARSDRLSQHLTSLYD--------------------QRLLA 135
Query: 372 GFVVDEAHCV 381
VVDEAHCV
Sbjct: 136 RIVVDEAHCV 145
>gi|303312131|ref|XP_003066077.1| DNA helicase recq1, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105739|gb|EER23932.1| DNA helicase recq1, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 1310
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 82/195 (42%), Gaps = 67/195 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++ A IF R FRP Q +A A+++ +D FVL+PTGGGKSLCYQ
Sbjct: 437 DVKAALRDIFNLRGFRPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVVQSGRTRGV 496
Query: 259 ------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
DQ+ L + A F+N ++ +L+ L+ V Q
Sbjct: 497 TVVISPLLSLMDDQVGQLR-SLSVKAHFINGSLKAAERRQILEYLQDPRVEDQ------- 548
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
+LLYVTPE + +Q+ + L+ LHR+
Sbjct: 549 --------------IQLLYVTPEMVNKSQAMLDTLRQLHRR------------------- 575
Query: 367 QRQLAGFVVDEAHCV 381
++ A V+DEAHCV
Sbjct: 576 -KKFARLVIDEAHCV 589
>gi|224133974|ref|XP_002327725.1| predicted protein [Populus trichocarpa]
gi|222836810|gb|EEE75203.1| predicted protein [Populus trichocarpa]
Length = 326
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 78/182 (42%), Gaps = 66/182 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FR Q +A +A ++ +DCF L+PTGGGKS+CYQ +
Sbjct: 33 FGYQDFRGKQLEAIEAVLSGRDCFCLMPTGGGKSMCYQIPALAKRGIVLVVSPLIALMEN 92
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L K GI A FL+S QT S + ++L G KP
Sbjct: 93 QVMALKEK-GIAAEFLSSTQTSSVRNKIHEDLDSG-----------------------KP 128
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
S +LLYVTPE ++ F L +H +G + L +DEAH
Sbjct: 129 SVRLLYVTPE-LIATPGFMSKLTKIHTRGLLNL--------------------IAIDEAH 167
Query: 380 CV 381
C+
Sbjct: 168 CI 169
>gi|91791699|ref|YP_561350.1| ATP-dependent DNA helicase RecQ [Shewanella denitrificans OS217]
gi|91713701|gb|ABE53627.1| ATP-dependent DNA helicase RecQ [Shewanella denitrificans OS217]
Length = 613
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R+FR Q + + ++A +D V++PTGGGKS+CYQ
Sbjct: 26 VFGYRSFREGQREVMERTLAGEDTLVIMPTGGGKSICYQLPALLFQGLTIVVSPLISLMK 85
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L ++ G+PA +LNS Q + VL++L G +
Sbjct: 86 DQVDSL-IQTGVPAAYLNSSQPREVSMNVLRQLHSGEI---------------------- 122
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ + F E L+ LH ++ F VDEA
Sbjct: 123 ---KLLYVSPERLL-REDFIERLQHLH------------------------VSLFAVDEA 154
Query: 379 HCV 381
HC+
Sbjct: 155 HCI 157
>gi|196013025|ref|XP_002116374.1| hypothetical protein TRIADDRAFT_30770 [Trichoplax adhaerens]
gi|190580965|gb|EDV21044.1| hypothetical protein TRIADDRAFT_30770 [Trichoplax adhaerens]
Length = 752
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 50/223 (22%)
Query: 175 SGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVI------FGNRAFRP 228
+G S++ A+ + + L + G EL+ ++ F+N + FG FR
Sbjct: 27 TGDSSNHANLTTTNQNQDLGTITTDGKCKIRELRC-NNHHFSNKMKEIFRSKFGLHKFRT 85
Query: 229 LQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQTV--SQAAA 286
Q +A A++ DCF+L+PTGGGKSLCYQ +PA +N TV S +
Sbjct: 86 NQLEAINAALLGYDCFILMPTGGGKSLCYQ-----------LPA-IVNDGVTVVISPLRS 133
Query: 287 VLQELRQGLVLSQHYFLHQLIFVLTCASR--------KDKPSCKLLYVTPERIVGNQSFS 338
++Q+ QGL L+ + + Q +T K PS LLY+TPE++ +
Sbjct: 134 LIQDQVQGL-LNLDFPVGQFTGEMTMKENNEMYQELYKRIPSISLLYLTPEKLSASSKLL 192
Query: 339 EVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
VL+ LH + + L+ FV+DEAHC+
Sbjct: 193 SVLRSLHLR--------------------KMLSRFVIDEAHCI 215
>gi|298708608|emb|CBJ26095.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 1537
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 81/183 (44%), Gaps = 62/183 (33%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
IFG+ FR Q + ++ +D FVL+PTGGGKSLCY Q
Sbjct: 587 IFGHAKFRTGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQ 646
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ + G+ A ++NS+Q E+R +V+ Q Y L +D
Sbjct: 647 DQVAQMRAT-GVEAAYINSEQDYD------SEVR--VVMDQLYRL------------QDY 685
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLY+TPE+ + S ++ L+ LH KG L+ FV+DEA
Sbjct: 686 GGLKLLYITPEKFCRSPSMNKALQRLHSKG--------------------LLSRFVIDEA 725
Query: 379 HCV 381
HCV
Sbjct: 726 HCV 728
>gi|166240658|ref|XP_645178.2| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
gi|165988694|gb|EAL71344.2| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
Length = 973
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 81/191 (42%), Gaps = 66/191 (34%)
Query: 213 MEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------------- 257
+E N IFGN+ FR LQ +A + + +D FV LPTGGGKSLC+
Sbjct: 466 VETCNRDIFGNKEFRNLQIEAINSILHDRDTFVSLPTGGGKSLCFQIPSIVDHRGVTFVI 525
Query: 258 -------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
QDQ+ L GIPA +NS + + VL +L G
Sbjct: 526 SPLLALMQDQVHKLK-SLGIPAESINSSGSQRENRDVLDQLLNG---------------E 569
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
TC KL+Y+TPER+ ++ F +L L+ +G +R
Sbjct: 570 TCK-------LKLIYITPERLAQSE-FLHLLDQLYDQGRLR------------------- 602
Query: 371 AGFVVDEAHCV 381
VVDEAHC+
Sbjct: 603 -RLVVDEAHCI 612
>gi|269862559|ref|XP_002650886.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
gi|220065467|gb|EED43171.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
Length = 491
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 78/192 (40%), Gaps = 66/192 (34%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------- 257
D+ F IF FR Q + +AS+ D FVL+PTGGGKSLCY
Sbjct: 263 DEKYFYLKTIFRLDEFRSNQKKIIEASLRGDDVFVLMPTGGGKSLCYQLPALINVGLTIV 322
Query: 258 --------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
QDQI +L L IPA LNS TV + + + +R
Sbjct: 323 ISPLLSLIQDQISSL-LNKNIPAAALNSNCTVGERDLIYKCIR----------------- 364
Query: 310 LTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
D +LLYVTPE + + F +LK L+ C+ +
Sbjct: 365 -------DTNLIRLLYVTPELLNNSDRFKGILKSLY--------------------CENK 397
Query: 370 LAGFVVDEAHCV 381
+ FV+DEAHCV
Sbjct: 398 VCRFVIDEAHCV 409
>gi|241999220|ref|XP_002434253.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215496012|gb|EEC05653.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 556
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 77/174 (44%), Gaps = 50/174 (28%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQ 279
+FG + FR Q +A A++ +DCF+L+PTGGGKSLCYQ +PA
Sbjct: 25 VFGLKQFRLNQLEAINAALLGEDCFILMPTGGGKSLCYQ-----------LPA------- 66
Query: 280 TVSQAAAVLQELRQGLVLSQHYFLHQL------------IFVLTCASRKDKPSCKLLYVT 327
VS+ V+ + L+ Q L L F + R +P +LLYVT
Sbjct: 67 VVSEGVTVVISPLKSLIYDQVQKLGSLDVPANHLSGDSDDFSVYSDLRSTQPRLRLLYVT 126
Query: 328 PERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
PE++ + + L LH G +L+ FV+DEAHCV
Sbjct: 127 PEKVSASGRLLDALSRLHANG--------------------RLSRFVIDEAHCV 160
>gi|254583105|ref|XP_002499284.1| ZYRO0E08250p [Zygosaccharomyces rouxii]
gi|238942858|emb|CAR31029.1| ZYRO0E08250p [Zygosaccharomyces rouxii]
Length = 1294
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 78/186 (41%), Gaps = 71/186 (38%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------- 258
FG R+FRP Q QA +++A +D FVL+PTGGGKSLCYQ
Sbjct: 557 FGLRSFRPNQLQAVNSTLAGKDVFVLMPTGGGKSLCYQLPAIVKSGKTRGTTIVISPLIS 616
Query: 259 ---DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
DQ+ L L I A+ +S+ T Q RQ L F+H L+
Sbjct: 617 LMQDQVEHL-LNNNIKASMFSSRGTADQR-------RQTFNL----FIHGLL-------- 656
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
L+Y++PE I ++ +K LH G +LA VV
Sbjct: 657 ------DLIYISPEMISASEQCKRGIKKLHNDG--------------------KLARIVV 690
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 691 DEAHCV 696
>gi|301106430|ref|XP_002902298.1| bloom syndrome protein [Phytophthora infestans T30-4]
gi|262098918|gb|EEY56970.1| bloom syndrome protein [Phytophthora infestans T30-4]
Length = 1022
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 76/167 (45%), Gaps = 32/167 (19%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-----DQIITLNLKFGIPATF 274
+FG+ AFRP Q + + + +D FVL+PTGGGKSLC+Q D +T+ + P
Sbjct: 215 VFGHNAFRPSQERTVMEAFSGRDVFVLMPTGGGKSLCFQLPACIDDGVTIVIS---PLVS 271
Query: 275 LNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGN 334
L Q Q L L Q Y Q + S + + K+LYVTPE+I +
Sbjct: 272 LIQDQV--QQLEALDVGVANLKGDQDYATEQRPIISELFSNQIR--IKMLYVTPEKIASS 327
Query: 335 QSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
S + K L ++G LA FV+DEAHC+
Sbjct: 328 GMLSNLFKSLEKRG--------------------LLARFVIDEAHCI 354
>gi|407917347|gb|EKG10661.1| Helicase [Macrophomina phaseolina MS6]
Length = 1739
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQQ 279
F R FRP Q + A++A +DCFVL+PTGGGKSLCYQ ++ G+
Sbjct: 862 FHLRGFRPHQLETINATLAGKDCFVLMPTGGGKSLCYQLPAVVQSGKTRGVTVVISPLLS 921
Query: 280 TVSQAAAVLQELR-QGLVLSQHYFLHQLIFVLTCASRKD-KPSCKLLYVTPERIVGNQSF 337
+ L+ L Q ++ Q F++ + ++LYVTPE + NQ+
Sbjct: 922 LMEDQVNHLRALHIQAFYINGELSYEQRRFIMNALREPQVEKFIQVLYVTPEMLSKNQAM 981
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+L+ LH + ++LA V+DEAHCV
Sbjct: 982 VNLLQDLHHR--------------------QRLARIVIDEAHCV 1005
>gi|194706042|gb|ACF87105.1| unknown [Zea mays]
Length = 406
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 85/201 (42%), Gaps = 68/201 (33%)
Query: 203 SFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---- 258
S E +A ++E FG FR Q +A +A ++ +DCF L+PTGGGKS+CYQ
Sbjct: 11 SGREKKAPKELESVLNRYFGYSGFRGKQLEAIEAVLSGRDCFCLMPTGGGKSMCYQIPAL 70
Query: 259 -----------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHY 301
+Q+ +L K G+PA FL+S Q + ++L G
Sbjct: 71 VKTGIVLVIPPLIALMENQVASLKNK-GVPAEFLSSTQASHTKQRIHEDLDTG------- 122
Query: 302 FLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVV 361
PS KLLYVTPE +V SF LK L+ +G
Sbjct: 123 ----------------NPSLKLLYVTPE-LVATSSFMAKLKKLYNRG------------- 152
Query: 362 LPHTCQRQLAGFV-VDEAHCV 381
L G V +DEAHC+
Sbjct: 153 --------LLGLVAIDEAHCI 165
>gi|269861548|ref|XP_002650477.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
gi|220066069|gb|EED43580.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
Length = 793
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 78/192 (40%), Gaps = 66/192 (34%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------- 257
D+ F IF FR Q + +AS+ D FVL+PTGGGKSLCY
Sbjct: 263 DEKYFYLKTIFRLDEFRSNQKKIIEASLRGDDVFVLMPTGGGKSLCYQLPALINVGLTIV 322
Query: 258 --------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
QDQI +L L IPA LNS TV + + + +R
Sbjct: 323 ISPLLSLIQDQISSL-LNKNIPAAALNSNCTVGERDLIYKCIR----------------- 364
Query: 310 LTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
D +LLYVTPE + + F +LK L+ C+ +
Sbjct: 365 -------DTNLIRLLYVTPELLNNSDRFKGILKSLY--------------------CENK 397
Query: 370 LAGFVVDEAHCV 381
+ FV+DEAHCV
Sbjct: 398 VCRFVIDEAHCV 409
>gi|152993842|ref|YP_001359563.1| ATP-dependent DNA helicase RecQ [Sulfurovum sp. NBC37-1]
gi|151425703|dbj|BAF73206.1| ATP-dependent DNA helicase RecQ [Sulfurovum sp. NBC37-1]
Length = 592
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 81/197 (41%), Gaps = 79/197 (40%)
Query: 206 ELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------- 258
+LQ L+D FG++ FRPLQ + A + ++D ++LPTGGGKSLCYQ
Sbjct: 3 KLQTLEDY-------FGHKTFRPLQEEVVDAILNREDVLMILPTGGGKSLCYQLPTLLME 55
Query: 259 --------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLH 304
DQ+I L GI A L+S Q + ++ + +L++G
Sbjct: 56 GVTVVVSPLLALMHDQVIALRAN-GISAAMLSSMQDMEESRQIEAQLQRG---------- 104
Query: 305 QLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPH 364
KLLYV PER+ N F L LH
Sbjct: 105 ---------------EIKLLYVAPERLT-NAYF---LNMLH------------------- 126
Query: 365 TCQRQLAGFVVDEAHCV 381
Q + FV+DEAHCV
Sbjct: 127 --QLDINFFVIDEAHCV 141
>gi|269859903|ref|XP_002649675.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
gi|220066870|gb|EED44340.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
Length = 793
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 78/192 (40%), Gaps = 66/192 (34%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------- 257
D+ F IF FR Q + +AS+ D FVL+PTGGGKSLCY
Sbjct: 263 DEKYFYLKTIFRLDEFRSNQKKIIEASLRGDDVFVLMPTGGGKSLCYQLPALINVGLTIV 322
Query: 258 --------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
QDQI +L L IPA LNS TV + + + +R
Sbjct: 323 ISPLLSLIQDQISSL-LNKNIPAAALNSNCTVGERDLIYKCIR----------------- 364
Query: 310 LTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
D +LLYVTPE + + F +LK L+ C+ +
Sbjct: 365 -------DTNLIRLLYVTPELLNNSDRFKGILKSLY--------------------CENK 397
Query: 370 LAGFVVDEAHCV 381
+ FV+DEAHCV
Sbjct: 398 VCRFVIDEAHCV 409
>gi|396081744|gb|AFN83359.1| ATP-dependent DNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 765
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 23/168 (13%)
Query: 214 EFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPAT 273
EF +F + FR Q + +A ++ +D FVL+PTGGGKS+CYQ + + +
Sbjct: 225 EFYLREVFKMKEFRMNQREVIQACLSGKDVFVLMPTGGGKSICYQLPALVYEGITIVVSP 284
Query: 274 FLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVG 333
L+ Q Q +LQ+ L ++ + ++ V A R D+ CK+ YVTPE I
Sbjct: 285 LLSLVQ--DQIRNLLQKDILALPINSNLSRNERSLVFE-ALRSDELICKIFYVTPELIAK 341
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ F +V+ L R+G +L FV+DEAHCV
Sbjct: 342 SGHFHDVVSELVRRG--------------------RLKRFVIDEAHCV 369
>gi|195112008|ref|XP_002000568.1| GI22449 [Drosophila mojavensis]
gi|193917162|gb|EDW16029.1| GI22449 [Drosophila mojavensis]
Length = 1409
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 49/233 (21%)
Query: 164 VKHSSKSVDCKSGVSTSSASSVSNKKRSSLISDNEH-----GTLSFEELQALDDMEFANV 218
V+ SK+ SG +TS+ +V+ +K + N H G ++ + + A
Sbjct: 585 VEAQSKATPSTSG-ATSAPVAVTAQKIEANFHSNVHNDGITGEFDGQKYEHSTRLMQALS 643
Query: 219 VIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIP------ 271
FG ++FRP Q Q A++ DCFVL+PTGGGKSLCYQ I+T + I
Sbjct: 644 FSFGLKSFRPNQLQVINAALLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLI 703
Query: 272 ---ATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTP 328
+ L+S +++ + Q L + + + + H P KLLYVTP
Sbjct: 704 FDQVSKLSSLDICAKSISGDQSLDEVMTIYRDLESH-------------PPLVKLLYVTP 750
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E+I + F + L L+ I + FV+DEAHCV
Sbjct: 751 EKISSSPRFQDTLDQLNANNYI--------------------SRFVIDEAHCV 783
>gi|325189523|emb|CCA24010.1| bloom syndrome protein putative [Albugo laibachii Nc14]
Length = 700
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 76/166 (45%), Gaps = 30/166 (18%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQ 278
IFG+ FRP Q + + K+D FVL+PTGGGKSLCYQ + L I Q
Sbjct: 360 IFGHTTFRPNQERVIHNAFEKRDIFVLMPTGGGKSLCYQLPACVDDGLTVVISPLVSLIQ 419
Query: 279 QTVSQAAAVLQELRQGLVL---SQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQ 335
V Q LQ L G+ Q Y Q V S +++ KLLYVTPE+I +
Sbjct: 420 DQVQQ----LQALDVGVAYLNGEQDYETVQRPIVSELFSSQNR--IKLLYVTPEKIASSG 473
Query: 336 SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+++ + L + +LA FV+DEAHC+
Sbjct: 474 MLTKLFESLENRS--------------------KLARFVIDEAHCI 499
>gi|227114714|ref|ZP_03828370.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|403060389|ref|YP_006648606.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402807715|gb|AFR05353.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 608
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 72/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L +G+ A LNS QT Q V+ R G +
Sbjct: 81 QVDQLQ-AYGVSAACLNSTQTREQQLEVMAGCRTGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER LTTD L H Q+A VDEAH
Sbjct: 117 --KLLYIAPER------------------------LTTD-SFLDHLAHWQIALIAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|357167600|ref|XP_003581242.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Brachypodium
distachyon]
Length = 1126
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 82/176 (46%), Gaps = 33/176 (18%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-----DQIITLNL 266
++E N +FGN +FRP Q + A++ D FVL+PTGGGKSL YQ D+ ITL +
Sbjct: 354 ELEAHNKRVFGNHSFRPNQREIINATMYGSDVFVLMPTGGGKSLTYQLPALIDEGITLVV 413
Query: 267 KFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHY-FLHQLIFVLTCASRKDKPSCKLLY 325
P L Q + A A + + LS + + Q + S + KLLY
Sbjct: 414 ---CPLVSLIQDQIMHLAQANI----PAICLSANVEWTEQQRILRDLMSPSSTCTYKLLY 466
Query: 326 VTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
VTPE+I + + L+ L+ +G L+ V+DEAHCV
Sbjct: 467 VTPEKIAKSDALLRQLEILYSRG--------------------HLSRIVIDEAHCV 502
>gi|302818699|ref|XP_002991022.1| hypothetical protein SELMODRAFT_41328 [Selaginella moellendorffii]
gi|300141116|gb|EFJ07830.1| hypothetical protein SELMODRAFT_41328 [Selaginella moellendorffii]
Length = 600
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 66/182 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG+ +FR LQ A +A +A +DCF ++PTG GKSLCYQ D
Sbjct: 9 FGHSSFRGLQLDAIEAVLAGKDCFCMMPTGAGKSLCYQIPALAKPGIVLVVSPLIALMED 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + I A +L+S Q V + +EL+ G KP
Sbjct: 69 QVAALKSR-QIFAEYLSSSQPVKMRNKIFEELQSG-----------------------KP 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ KLLYVTPE + N ++ K LH + + L +DEAH
Sbjct: 105 NLKLLYVTPESVATNHLMQKLRK-LHERSLLSL--------------------IAIDEAH 143
Query: 380 CV 381
C+
Sbjct: 144 CI 145
>gi|345486372|ref|XP_001605988.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1211
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 71/175 (40%), Gaps = 51/175 (29%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FRP Q A A + DCFVL+PTGGGKSLCYQ +PA
Sbjct: 523 FGLHQFRPNQLPAINAVILGHDCFVLMPTGGGKSLCYQ-----------LPALL------ 565
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS-----------RK---DKPSCKLLYV 326
V+ LR +V L I L RK + + KLLYV
Sbjct: 566 APGVTIVISPLRSLIVDQTQKLLSLDISALYLTGDLSNEQMNGVYRKLYNTESNLKLLYV 625
Query: 327 TPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
TPE+I + F + L L+R G +LA FV+DE HCV
Sbjct: 626 TPEKISKSTKFCDSLLRLYRDG--------------------KLARFVIDEVHCV 660
>gi|302820099|ref|XP_002991718.1| hypothetical protein SELMODRAFT_41332 [Selaginella moellendorffii]
gi|300140567|gb|EFJ07289.1| hypothetical protein SELMODRAFT_41332 [Selaginella moellendorffii]
Length = 594
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 66/182 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG+ +FR LQ A +A +A +DCF ++PTG GKSLCYQ D
Sbjct: 9 FGHSSFRGLQLDAIEAVLAGKDCFCMMPTGAGKSLCYQIPALAKPGIVLVVSPLIALMED 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + I A +L+S Q V + +EL+ G KP
Sbjct: 69 QVAALKSR-QIFAEYLSSSQPVKMRNKIFEELQSG-----------------------KP 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ KLLYVTPE + N ++ K LH + + L +DEAH
Sbjct: 105 NLKLLYVTPESVATNHLMQKLRK-LHERSLLSL--------------------IAIDEAH 143
Query: 380 CV 381
C+
Sbjct: 144 CI 145
>gi|449471881|ref|XP_004175079.1| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein homolog
[Taeniopygia guttata]
Length = 1069
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 78/182 (42%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 391 FGLHCFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTIVISPLRSLIID 450
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L I AT+L +T + A+ + +L S+KD P
Sbjct: 451 QVQKLK-TLDIAATYLTGDRTDADASKIYMQL----------------------SKKD-P 486
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 487 VIKLLYVTPEKVCASNRLMSTLENLYDR--------------------KLLARFVIDEAH 526
Query: 380 CV 381
CV
Sbjct: 527 CV 528
>gi|269863164|ref|XP_002651119.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
gi|220065094|gb|EED42937.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
Length = 354
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 78/192 (40%), Gaps = 66/192 (34%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------- 257
D+ F IF FR Q + +AS+ D FVL+PTGGGKSLCY
Sbjct: 58 DEKYFYLKTIFRLDEFRSNQKKIIEASLRGDDVFVLMPTGGGKSLCYQLPALINVGLTIV 117
Query: 258 --------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
QDQI +L L IPA LNS TV + + + +R
Sbjct: 118 ISPLLSLIQDQISSL-LNKNIPAAALNSNCTVGERDLIYKCIR----------------- 159
Query: 310 LTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
D +LLYVTPE + + F +LK L+ C+ +
Sbjct: 160 -------DTNLIRLLYVTPELLNNSDRFKGILKSLY--------------------CENK 192
Query: 370 LAGFVVDEAHCV 381
+ FV+DEAHCV
Sbjct: 193 VCRFVIDEAHCV 204
>gi|392396238|ref|YP_006432839.1| ATP-dependent DNA helicase RecQ [Flexibacter litoralis DSM 6794]
gi|390527316|gb|AFM03046.1| ATP-dependent DNA helicase RecQ [Flexibacter litoralis DSM 6794]
Length = 725
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 76/181 (41%), Gaps = 70/181 (38%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG FRPLQ + AK D VL+PTGGGKS+C+Q ITL+
Sbjct: 14 FGYSTFRPLQEDIISSVYAKNDTLVLMPTGGGKSICFQIPAITLDGICIVISPLIALMKD 73
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
GI A FLNS Q +++ + E++QG +
Sbjct: 74 QVNALQTNGISAAFLNSSQDMAEQREIESEVKQGKI------------------------ 109
Query: 321 CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
KLLYV+PE+++ +SF+ L+ L SI L F VDEAHC
Sbjct: 110 -KLLYVSPEKLL-TESFTYFLQSL----SISL--------------------FAVDEAHC 143
Query: 381 V 381
+
Sbjct: 144 I 144
>gi|253690325|ref|YP_003019515.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756903|gb|ACT14979.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 608
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 72/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L +G+ A LNS QT Q V+ R G +
Sbjct: 81 QVDQLQ-AYGVSAACLNSTQTREQQLEVMAGCRTGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER LTTD L H Q+A VDEAH
Sbjct: 117 --KLLYIAPER------------------------LTTD-SFLDHLAHWQIALIAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|66802111|ref|XP_629849.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
gi|60463228|gb|EAL61421.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
Length = 1259
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 82/201 (40%), Gaps = 56/201 (27%)
Query: 196 DNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSL 255
DN +F Q + D+ N +FG FR Q + +++ D FVL+PTGGGKSL
Sbjct: 500 DNSRFKGNFPWSQKIIDI---NRSMFGFHVFRENQREIINSTLEGNDTFVLMPTGGGKSL 556
Query: 256 CYQDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS- 314
CYQ IPA + + ++ L+ Q FL L + S
Sbjct: 557 CYQ-----------IPALY-------QKGLTIVISPLISLINDQVEFLETLGYPAAALSS 598
Query: 315 --------------RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVV 360
R + P +LLY+TPER+V + S E+L L +KG
Sbjct: 599 AVSSDAAIDVYKDIRSNSPKIRLLYLTPERVVKSDSLIEILANLDQKG------------ 646
Query: 361 VLPHTCQRQLAGFVVDEAHCV 381
+ V+DEAHCV
Sbjct: 647 --------LFSRIVIDEAHCV 659
>gi|255579679|ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative [Ricinus communis]
Length = 1233
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 80/190 (42%), Gaps = 65/190 (34%)
Query: 213 MEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------------- 257
+E N +FGN +FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 447 LEAYNKKVFGNHSFRPNQREVINATMSGFDVFVLMPTGGGKSLTYQLPALVCPGITLVIS 506
Query: 258 ------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLT 311
QDQI+ L L+ I A +L++ ++ +L+EL
Sbjct: 507 PLVSLIQDQIMHL-LQANISAAYLSANMEWAEQQEILRELSS------------------ 547
Query: 312 CASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLA 371
D KLLYVTPE++ + L+ L+ +G LA
Sbjct: 548 -----DYCKYKLLYVTPEKVAKSDVLLRNLESLNARG--------------------LLA 582
Query: 372 GFVVDEAHCV 381
V+DEAHCV
Sbjct: 583 RIVIDEAHCV 592
>gi|238756279|ref|ZP_04617594.1| ATP-dependent DNA helicase recQ [Yersinia ruckeri ATCC 29473]
gi|238705485|gb|EEP97887.1| ATP-dependent DNA helicase recQ [Yersinia ruckeri ATCC 29473]
Length = 609
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 77/182 (42%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A++A QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIINATLAGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A LNS QT Q AV+ R G +
Sbjct: 81 QVDQL-LAYGVAAGCLNSSQTREQQLAVMDGCRNGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+V ++F E L+ H + ++ VDEAH
Sbjct: 117 --KLLYIAPERLV-MENFLEQLE--HWRPAL----------------------LAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|361131758|gb|EHL03410.1| putative ATP-dependent DNA helicase hus2/rqh1 [Glarea lozoyensis
74030]
Length = 855
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 95/230 (41%), Gaps = 37/230 (16%)
Query: 164 VKHSSKSVDCKSGVSTSS------ASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFAN 217
K S+K + STSS + + NK D H ++ A D++ A
Sbjct: 63 AKSSTKPYETPRNASTSSRLPDNHSRADVNKSTMYTTMDPAHASMMKHPWSA--DVKKAL 120
Query: 218 VVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----P 271
FG R FR Q +A A++ +D F+L+PTGGGKSLCYQ ++ G+ P
Sbjct: 121 RDRFGLRGFRQNQLEAINATLGGKDAFILMPTGGGKSLCYQLPAVVQSGKTRGVTLVVSP 180
Query: 272 ATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERI 331
L S Q A +Q L+ + I RK + +LLYVTPE +
Sbjct: 181 LLSLMSDQVDHLKARNIQAC---LISGDTSKEERSIVFAALEERKPEQYIQLLYVTPEMV 237
Query: 332 VGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
++ L LHR QR LA V+DEAHCV
Sbjct: 238 ANSRKLESTLDKLHR-------------------IQR-LARIVIDEAHCV 267
>gi|38230500|gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]
Length = 772
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 76/179 (42%), Gaps = 63/179 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------------DQII 262
FG + FR Q +A +A ++ +DCF L+PTGGGKS+CYQ +Q+I
Sbjct: 33 FGYQDFRGKQLEAIEAVLSGRDCFCLMPTGGGKSMCYQIPALAKHGIVLVVSPLIENQVI 92
Query: 263 TLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCK 322
L K GI A FL+S Q + ++L G KPS +
Sbjct: 93 ALKEK-GIAAEFLSSTQHQVVRNKIHEDLDSG-----------------------KPSVR 128
Query: 323 LLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
LLYVTPE ++ F L +H +G + L +DEAHC+
Sbjct: 129 LLYVTPE-LIATPGFMSKLTKIHTRGLLNL--------------------IAIDEAHCI 166
>gi|119773474|ref|YP_926214.1| ATP-dependent DNA helicase RecQ [Shewanella amazonensis SB2B]
gi|119765974|gb|ABL98544.1| ATP-dependent DNA helicase RecQ [Shewanella amazonensis SB2B]
Length = 607
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 75/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FRP Q + +DC V++PTGGGKSLCYQ
Sbjct: 20 VFGYRDFRPGQREVMTRVCQGEDCLVIMPTGGGKSLCYQVPALVLPGVTLVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L ++ G+ A +LNS Q QA VL++LR G
Sbjct: 80 DQVDSL-IQSGVAAAYLNSSQPREQAIEVLRQLRFG------------------------ 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ S L LH ++ F VDEA
Sbjct: 115 -ELKLLYVSPERLLQGDFLSR-LDELH------------------------ISLFAVDEA 148
Query: 379 HCV 381
HC+
Sbjct: 149 HCI 151
>gi|427722202|ref|YP_007069479.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7376]
gi|427353922|gb|AFY36645.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7376]
Length = 715
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 81/190 (42%), Gaps = 68/190 (35%)
Query: 213 MEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------------- 257
+E A FG +FRP Q +A++ +D L+PTG GKS+C+
Sbjct: 7 LEAALKHFFGYESFRPGQKTVIEAALQNRDVLALMPTGAGKSICFQLPALLKSGLTVVIS 66
Query: 258 ------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLT 311
QDQ+ +L GI ATFLNS ++QA + +Q + G +
Sbjct: 67 PLIALMQDQVDSLT-DNGIGATFLNSTLNLNQARSRIQAILNGKI--------------- 110
Query: 312 CASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLA 371
KLLYV PER+ N+ F E L + TD V L+
Sbjct: 111 ----------KLLYVAPERLF-NEGFQEFLNDV------------TDSV--------GLS 139
Query: 372 GFVVDEAHCV 381
GFVVDEAHCV
Sbjct: 140 GFVVDEAHCV 149
>gi|425778070|gb|EKV16215.1| RecQ family helicase MusN [Penicillium digitatum Pd1]
gi|425780607|gb|EKV18613.1| RecQ family helicase MusN [Penicillium digitatum PHI26]
Length = 1426
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQQ 279
F R FRP Q +A A++A +D F+L+PTGGGKSLCYQ ++T G+
Sbjct: 569 FHLRGFRPNQLEAIDATLAGKDTFILMPTGGGKSLCYQLPSVVTGGSTTGVTIVISPLLS 628
Query: 280 TVSQAAAVLQELR-QGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFS 338
+ + LQ+L+ + +++ + ++++ + ++LY+TPE + +Q+
Sbjct: 629 LMEDQVSHLQKLKVKAFMINGDTNPEEKSWIMSQLTNAGGEGMEVLYITPEMLSKSQALI 688
Query: 339 EVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L+ LH + +LA V+DEAHCV
Sbjct: 689 RALEKLHGRN--------------------RLARLVIDEAHCV 711
>gi|336313085|ref|ZP_08568028.1| ATP-dependent DNA helicase RecQ [Shewanella sp. HN-41]
gi|335863205|gb|EGM68363.1| ATP-dependent DNA helicase RecQ [Shewanella sp. HN-41]
Length = 607
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 76/183 (41%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FR Q + + QDC V++PTGGGKSLCYQ
Sbjct: 20 VFGYRDFRDGQREVIERVCNGQDCLVIMPTGGGKSLCYQLPALLMDGITIVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L L+ G+ A +LNS Q+A VL++LR G
Sbjct: 80 DQVDSL-LQTGVAAAYLNSSLPREQSAEVLRQLRHG------------------------ 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ F E ++ + LA F +DEA
Sbjct: 115 -ELKLLYVSPERLL-TADFIERMQSM------------------------PLAMFAIDEA 148
Query: 379 HCV 381
HC+
Sbjct: 149 HCI 151
>gi|303271731|ref|XP_003055227.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463201|gb|EEH60479.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 581
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 73/182 (40%), Gaps = 63/182 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
F + FR +Q ++AK DC VL+PTGGGKSLCY QD
Sbjct: 67 FNAQDFRGMQLATINCTLAKHDCLVLMPTGGGKSLCYQLPALISSGVTVVISPLVSLIQD 126
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L+ + IPA L S + QAA Q SQ Y + P
Sbjct: 127 QLHHLS-EMNIPAAVLGSAENEGQAA-------QDATYSQLY--------------SNPP 164
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+TPE++ + L+ LH +G LA VVDE H
Sbjct: 165 GLKLLYLTPEKVARSPKLMRALETLHGRG--------------------MLARIVVDEVH 204
Query: 380 CV 381
C+
Sbjct: 205 CI 206
>gi|449015395|dbj|BAM78797.1| ATP-dependent DNA helicase RecQ [Cyanidioschyzon merolae strain
10D]
Length = 1603
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 81/190 (42%), Gaps = 69/190 (36%)
Query: 217 NVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------------ 258
N V FGN+ FR Q +A A++ +D FVL+PTGGGKSL YQ
Sbjct: 774 NRVQFGNQGFRANQKEAINAAMCGRDVFVLMPTGGGKSLVYQLAATLTGPAGCGVTVVVS 833
Query: 259 -------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLT 311
DQ++ L IP L + +++ ++++LR LH
Sbjct: 834 PLKSLIMDQVMRLQ-ALRIPCGALCGATSETESRELMRDLRS---------LH------- 876
Query: 312 CASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLA 371
P ++LYVTPE+I +++F +L L ++ LA
Sbjct: 877 -------PKTRILYVTPEKISLSEAFRSILDWL--------------------ASRKLLA 909
Query: 372 GFVVDEAHCV 381
FV+DEAHCV
Sbjct: 910 RFVIDEAHCV 919
>gi|303390001|ref|XP_003073232.1| ATP-dependent DNA helicase [Encephalitozoon intestinalis ATCC
50506]
gi|303302377|gb|ADM11872.1| ATP-dependent DNA helicase [Encephalitozoon intestinalis ATCC
50506]
Length = 762
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 23/179 (12%)
Query: 203 SFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQII 262
S E+ + EF +F + FR Q + +A ++ +D FVL+PTGGGKS+CYQ +
Sbjct: 211 SHEDFEPKSIEEFYLREVFKMKEFRTNQREVIQACLSGKDVFVLMPTGGGKSICYQLPAL 270
Query: 263 TLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCK 322
+ + L+ Q Q +LQ+ L ++ + + V A D+ CK
Sbjct: 271 VYEGVTIVVSPLLSLVQ--DQILNLLQKDILALPINSNLSRTERRLVFE-ALGSDELICK 327
Query: 323 LLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ YVTPE I + F EV+ L R+G +L FV+DEAHCV
Sbjct: 328 IFYVTPELIAKSGHFHEVVSGLVRRG--------------------RLKRFVIDEAHCV 366
>gi|195054415|ref|XP_001994120.1| GH17364 [Drosophila grimshawi]
gi|193895990|gb|EDV94856.1| GH17364 [Drosophila grimshawi]
Length = 1404
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 65/229 (28%)
Query: 174 KSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQA 233
++ + +SA +S +++ +D G ++ + + A FG ++FRP Q Q
Sbjct: 592 RTSIVPASAQKISGNFHANVHNDGITGEFDGQKFEHSTRLMQALSFSFGLKSFRPNQLQV 651
Query: 234 CKASVAKQDCFVLLPTGGGKSLCYQ---------------------DQIITLNLKFGIPA 272
A++ DCFVL+PTGGGKSLCYQ DQ+ L I A
Sbjct: 652 INAALLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFDQVSKL-ASLDICA 710
Query: 273 TFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIV 332
++ +Q++ A+ ++L P KLLYVTPE+I
Sbjct: 711 KSMSGEQSMEDTMAIYRDL-----------------------EGHSPLVKLLYVTPEKIS 747
Query: 333 GNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ F + L L + ++ FV+DEAHCV
Sbjct: 748 SSARFQDTLDHL--------------------SANNFISRFVIDEAHCV 776
>gi|225448193|ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
vinifera]
Length = 1224
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 79/192 (41%), Gaps = 71/192 (36%)
Query: 213 MEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------------- 257
+E N +FGN +FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 415 LEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALISPGITLVIS 474
Query: 258 ------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLT 311
QDQI+ L L+ IPA +L++ ++ +L+EL
Sbjct: 475 PLVSLIQDQIMHL-LQANIPAAYLSASMEWNEQQEILRELS------------------- 514
Query: 312 CASRKDKPSC--KLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
SC KLLY TPE++ + L LH +
Sbjct: 515 --------SCKYKLLYATPEKVAKSDVLMRNLDNLH--------------------AREL 546
Query: 370 LAGFVVDEAHCV 381
L+ V+DEAHCV
Sbjct: 547 LSRIVIDEAHCV 558
>gi|182415498|ref|YP_001820564.1| ATP-dependent DNA helicase RecQ [Opitutus terrae PB90-1]
gi|177842712|gb|ACB76964.1| ATP-dependent DNA helicase RecQ [Opitutus terrae PB90-1]
Length = 612
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 78/194 (40%), Gaps = 72/194 (37%)
Query: 209 ALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------- 258
A DD++ FG +FRPLQ + A++A QD F LLPTGGGKSLC+Q
Sbjct: 4 APDDLDLTLKRTFGYGSFRPLQREIIAATLAGQDVFALLPTGGGKSLCFQLPALVRPGLT 63
Query: 259 -----------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLI 307
DQ+ L G+ ATFLNS ++ L+ L QG
Sbjct: 64 VVVSPLIALMKDQVDALQAS-GVAATFLNSTLDADESRRRLRGLHQG------------- 109
Query: 308 FVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQ 367
KLLYV PER++ N + + L+
Sbjct: 110 ------------EFKLLYVAPERLMLN-GWQDNLRAW----------------------- 133
Query: 368 RQLAGFVVDEAHCV 381
Q+A +DEAHC+
Sbjct: 134 -QIACLAIDEAHCI 146
>gi|297739574|emb|CBI29756.3| unnamed protein product [Vitis vinifera]
Length = 1235
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 79/192 (41%), Gaps = 71/192 (36%)
Query: 213 MEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------------- 257
+E N +FGN +FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 426 LEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALISPGITLVIS 485
Query: 258 ------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLT 311
QDQI+ L L+ IPA +L++ ++ +L+EL
Sbjct: 486 PLVSLIQDQIMHL-LQANIPAAYLSASMEWNEQQEILRELS------------------- 525
Query: 312 CASRKDKPSC--KLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
SC KLLY TPE++ + L LH +
Sbjct: 526 --------SCKYKLLYATPEKVAKSDVLMRNLDNLH--------------------AREL 557
Query: 370 LAGFVVDEAHCV 381
L+ V+DEAHCV
Sbjct: 558 LSRIVIDEAHCV 569
>gi|348680141|gb|EGZ19957.1| hypothetical protein PHYSODRAFT_312852 [Phytophthora sojae]
Length = 1112
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 32/167 (19%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-----DQIITLNLKFGIPATF 274
+FG+ AFRP Q + + +++D FVL+PTGGGKSLCYQ D +T+ + +
Sbjct: 303 VFGHNAFRPNQERTVMEAFSRRDVFVLMPTGGGKSLCYQLPACIDDGVTI-----VVSPL 357
Query: 275 LNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGN 334
++ Q Q L L Q Y Q + S + + K+LYVTPE+I +
Sbjct: 358 VSLIQDQVQQLEALDVGVANLNGDQDYDTVQKPIISELFSNRIR--IKMLYVTPEKIASS 415
Query: 335 QSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ + + L ++G LA FV+DEAHC+
Sbjct: 416 GMLNNLFESLEKRG--------------------LLARFVIDEAHCI 442
>gi|443925918|gb|ELU44675.1| RecQ type DNA helicase Rqh1 [Rhizoctonia solani AG-1 IA]
Length = 1389
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 77/187 (41%), Gaps = 69/187 (36%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG +FR Q A A+++ QD FVL+PTGGGKSLCYQ
Sbjct: 592 VFGLESFRTNQAPAVDATMSGQDVFVLMPTGGGKSLCYQLPAVCTTGRTRGVTFVVSPLK 651
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L K G+ +S Q+ A +E R LV +
Sbjct: 652 SLMIDQVRQLRSK-GVDVIMFSSDQSAKAA----REARNRLV-----------------A 689
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
R KPS L YVTPE++ + +L L R G +LA FV
Sbjct: 690 RGPKPS--LAYVTPEKLERSGDMRSILDKLMRSG--------------------ELARFV 727
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 728 IDEAHCV 734
>gi|410907219|ref|XP_003967089.1| PREDICTED: Bloom syndrome protein homolog [Takifugu rubripes]
Length = 1392
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 75/182 (41%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +D FVL+PTGGGKSLCYQ D
Sbjct: 639 FGLHQFRYNQLEAINATLQGEDTFVLMPTGGGKSLCYQLPACVSPGVTVVISPLKSLIVD 698
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
QI L IPAT L+ +A + +L SRK+ P
Sbjct: 699 QIQKLTT-LDIPATSLSGDLGEREAGRIYMQL----------------------SRKE-P 734
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ +G LA FV+DEAH
Sbjct: 735 IVKLLYVTPEKVSASNKLISALQNLYERG--------------------LLARFVIDEAH 774
Query: 380 CV 381
CV
Sbjct: 775 CV 776
>gi|308452165|ref|XP_003088938.1| hypothetical protein CRE_17749 [Caenorhabditis remanei]
gi|308244257|gb|EFO88209.1| hypothetical protein CRE_17749 [Caenorhabditis remanei]
Length = 1020
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 72/169 (42%), Gaps = 39/169 (23%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FR Q Q +++ D FVL+PTG GKSLCYQ + L G+ +
Sbjct: 277 FGFNQFRHRQKQCILSTLMGNDTFVLMPTGAGKSLCYQLPAVILP---GVTVVVSPLRSL 333
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD--------KPSCKLLYVTPERIV 332
+ ++EL G L L+ +++D P+ KLLYVTPE+I
Sbjct: 334 IEDQKMKMKELGIG--------CEALTADLSAGAQEDIYSDLTSENPTIKLLYVTPEKIS 385
Query: 333 GNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ V LHR+G LA FV+DEAHCV
Sbjct: 386 ASGRLISVFYTLHRRG--------------------LLARFVIDEAHCV 414
>gi|163751804|ref|ZP_02159020.1| ATP-dependent DNA helicase RecQ [Shewanella benthica KT99]
gi|161328289|gb|EDP99450.1| ATP-dependent DNA helicase RecQ [Shewanella benthica KT99]
Length = 610
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 75/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FR Q + + A DC V++PTGGGKSLCYQ
Sbjct: 22 VFGYRTFRKGQREVIEQICAGIDCLVIMPTGGGKSLCYQLPALQMPGLTIVVSPLISLMK 81
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L + G+ A +LNS Q + A +L+E+ G
Sbjct: 82 DQVDSLQ-QMGVNAGYLNSSQAGEERARILREMHSG------------------------ 116
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ SF E L LH ++ F +DEA
Sbjct: 117 -ELKLLYVSPERLL-QASFIERLHELH------------------------ISLFAIDEA 150
Query: 379 HCV 381
HC+
Sbjct: 151 HCI 153
>gi|221505512|gb|EEE31157.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii VEG]
Length = 1753
Score = 71.6 bits (174), Expect = 5e-10, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 32/199 (16%)
Query: 186 SNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFV 245
S R + +S N FE +A+ N +FGNRAFRP+Q A ++++D FV
Sbjct: 703 SGSVRVNTVSRNWEAERGFEWDEAV---RACNEKVFGNRAFRPMQRAIINAVLSQRDVFV 759
Query: 246 LLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQG---LVLSQHYF 302
++PTGGGKSLC+Q I + G+ + ++ +Q L G +Q +
Sbjct: 760 MMPTGGGKSLCFQLPAI---VSGGVTVVVMPLVSLITDQLEQMQLLNVGCRAFAANQPWE 816
Query: 303 LHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVL 362
+ ++ R+ LL VTPE++ G+ L L+R+G
Sbjct: 817 EQKAVYD---ELRRGTGEIHLLLVTPEKLKGSSLLRSCLHELNREGC------------- 860
Query: 363 PHTCQRQLAGFVVDEAHCV 381
L F +DEAHCV
Sbjct: 861 -------LDRFAIDEAHCV 872
>gi|261330758|emb|CBH13743.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
brucei gambiense DAL972]
Length = 1548
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 194 ISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGK 253
I+ G S E +++ V +FG FR LQ + A +A +D FVLLPTGGGK
Sbjct: 432 IAKASTGEFSGEHYPWSEELRRTMVDVFGLHNFRFLQLEIMNACMANRDVFVLLPTGGGK 491
Query: 254 SLCYQDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTC- 312
SLCYQ +PA N + + ++ ++ + + Y L +
Sbjct: 492 SLCYQ-----------LPALLPNPAKVTIVISPLVSLIQDQVYALRAYDLPAMALTGQTL 540
Query: 313 -ASRKD--------KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLP 363
A R+D + C L+YVTPE + F + LK L +G
Sbjct: 541 DAPRRDLFNEWSSGRIVCTLVYVTPEYFGRSDHFVQSLKSLENRG--------------- 585
Query: 364 HTCQRQLAGFVVDEAHCV 381
L FVVDEAHCV
Sbjct: 586 -----LLNRFVVDEAHCV 598
>gi|123440598|ref|YP_001004592.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087559|emb|CAL10340.1| ATP-dependent DNA helicase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 616
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 76/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A LNS QT Q AV+ R G +
Sbjct: 81 QVDQL-LAYGVGAGCLNSSQTREQQLAVMDGCRSGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+V +SF L LH Q + A VDEAH
Sbjct: 117 --KLLYIAPERLV-MESF---LDQLH---------------------QWRPALLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|261823379|ref|YP_003261485.1| ATP-dependent DNA helicase RecQ [Pectobacterium wasabiae WPP163]
gi|261607392|gb|ACX89878.1| ATP-dependent DNA helicase RecQ [Pectobacterium wasabiae WPP163]
gi|385873847|gb|AFI92367.1| ATP-dependent DNA helicase RecQ [Pectobacterium sp. SCC3193]
Length = 608
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 72/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L +G+ A LNS QT Q V+ R G +
Sbjct: 81 QVDQLQ-AYGVSAACLNSTQTREQQLEVMAGCRTGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER LTTD L H Q++ VDEAH
Sbjct: 117 --KLLYIAPER------------------------LTTD-SFLDHLAHWQISLIAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|238763624|ref|ZP_04624584.1| ATP-dependent DNA helicase recQ [Yersinia kristensenii ATCC 33638]
gi|238698102|gb|EEP90859.1| ATP-dependent DNA helicase recQ [Yersinia kristensenii ATCC 33638]
Length = 610
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 76/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A LNS QT Q AV+ R G +
Sbjct: 81 QVDQL-LAYGVGAGCLNSSQTREQQLAVMDGCRSGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+V +SF L LH Q + A VDEAH
Sbjct: 117 --KLLYIAPERLV-MESF---LDQLH---------------------QWRPALLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|421079860|ref|ZP_15540796.1| ATP-dependent helicase RecQ [Pectobacterium wasabiae CFBP 3304]
gi|401705347|gb|EJS95534.1| ATP-dependent helicase RecQ [Pectobacterium wasabiae CFBP 3304]
Length = 608
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 72/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L +G+ A LNS QT Q V+ R G +
Sbjct: 81 QVDQLQ-AYGVSAACLNSTQTREQQLEVMAGCRTGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER LTTD L H Q++ VDEAH
Sbjct: 117 --KLLYIAPER------------------------LTTD-SFLDHLAHWQISLIAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|237842165|ref|XP_002370380.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|211968044|gb|EEB03240.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|221502834|gb|EEE28548.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii VEG]
Length = 1626
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 39/173 (22%)
Query: 217 NVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITL-NLKFGI-PATF 274
N +FG FR LQ A A ++ +DCF+++PTGGGKSLCYQ L L I P
Sbjct: 636 NKEVFGYTDFRGLQLGAINAVMSGRDCFLVMPTGGGKSLCYQLPAYALGGLTLVISPLLA 695
Query: 275 LNSQQTVS------QAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTP 328
L Q S +AA + E+ +G +L+ + L Q F L ++L TP
Sbjct: 696 LMGDQLRSLKNLGVEAAKIDGEISKGDLLALYDELSQPSFSL-----------RVLMATP 744
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E + +++ + VL+ +H +G + L VVDEAHCV
Sbjct: 745 EFLARSEALTTVLRSVHARGLLSL--------------------LVVDEAHCV 777
>gi|238750693|ref|ZP_04612192.1| ATP-dependent DNA helicase recQ [Yersinia rohdei ATCC 43380]
gi|238711083|gb|EEQ03302.1| ATP-dependent DNA helicase recQ [Yersinia rohdei ATCC 43380]
Length = 610
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 76/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTEGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A LNS QT Q AV+ R G +
Sbjct: 81 QVDQL-LAYGVGAGCLNSSQTREQQLAVMDGCRSGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+V +SF L LH Q + A VDEAH
Sbjct: 117 --KLLYIAPERLV-MESF---LDQLH---------------------QWRPALLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|399215939|emb|CCF72627.1| unnamed protein product [Babesia microti strain RI]
Length = 706
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 47/182 (25%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGI 270
++++ N +F N FRP+Q + + ++ D F L+PTGGGK+LCYQ +
Sbjct: 163 NEIKRINSEVFNNTGFRPMQLEIINSVISGNDTFALVPTGGGKTLCYQ-----------L 211
Query: 271 PATFLNS-QQTVSQAAAVLQELRQGLVL----------SQHYFLHQLIFVLTCASRKDKP 319
PA + + +S +++Q+ Q L Q YF L+ +
Sbjct: 212 PAIYSDGITLVISPLISLIQDQVQRLEFLNISCASFPTEQEYFER-----LSIIEKLRNA 266
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K+L+VTPE+IV ++ F VL L+ K L FV+DEAH
Sbjct: 267 EIKVLFVTPEKIVSSKWFQSVLDELYSK--------------------ELLVRFVIDEAH 306
Query: 380 CV 381
C+
Sbjct: 307 CI 308
>gi|332159828|ref|YP_004296405.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386310846|ref|YP_006006902.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418243645|ref|ZP_12870111.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|420261107|ref|ZP_14763764.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|433548693|ref|ZP_20504742.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica IP 10393]
gi|318607629|emb|CBY29127.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664058|gb|ADZ40702.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862578|emb|CBX72731.1| ATP-dependent DNA helicase recQ [Yersinia enterocolitica W22703]
gi|351776862|gb|EHB19136.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|404511396|gb|EKA25274.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|431790342|emb|CCO67782.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica IP 10393]
Length = 616
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 76/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A LNS QT Q AV+ R G +
Sbjct: 81 QVDQL-LAYGVGAGCLNSSQTREQQLAVMDGCRSGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+V +SF L LH Q + A VDEAH
Sbjct: 117 --KLLYIAPERLV-MESF---LDQLH---------------------QWRPALLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|72393397|ref|XP_847499.1| ATP-dependent DEAD/H DNA helicase recQ [Trypanosoma brucei TREU927]
gi|62359597|gb|AAX80030.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
brucei]
gi|70803529|gb|AAZ13433.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 1548
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 83/198 (41%), Gaps = 41/198 (20%)
Query: 194 ISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGK 253
I+ G S E +++ V +FG FR LQ + A +A +D FVLLPTGGGK
Sbjct: 432 IAKASTGEFSGEHYPWSEELRRTMVDVFGLHNFRFLQLEIMNACMANRDVFVLLPTGGGK 491
Query: 254 SLCYQDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTC- 312
SLCYQ +PA N + + ++ ++ + + Y L +
Sbjct: 492 SLCYQ-----------LPALLPNPAKVTIVISPLVSLIQDQVYALRAYDLPAMALTGQTL 540
Query: 313 -ASRKD--------KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLP 363
A R+D + C L+YVTPE + F + LK L +G
Sbjct: 541 DAPRRDLFNEWSSGRIVCTLVYVTPEYFGRSDHFVQSLKSLENRG--------------- 585
Query: 364 HTCQRQLAGFVVDEAHCV 381
L FVVDEAHCV
Sbjct: 586 -----LLNRFVVDEAHCV 598
>gi|227325786|ref|ZP_03829810.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 609
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 72/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L +G+ A LNS QT Q V+ R G +
Sbjct: 81 QVDQLQ-AYGVSAACLNSTQTREQQLEVMAGCRTGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER LTTD L H Q++ VDEAH
Sbjct: 117 --KLLYIAPER------------------------LTTD-SFLDHLAHWQISLIAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|237838631|ref|XP_002368613.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|211966277|gb|EEB01473.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
Length = 1753
Score = 71.6 bits (174), Expect = 6e-10, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 32/199 (16%)
Query: 186 SNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFV 245
S R + +S N FE +A+ N +FGNRAFRP+Q A ++++D FV
Sbjct: 703 SGSVRVNTVSRNWEAERGFEWDEAV---RACNEKVFGNRAFRPMQRAIINAVLSQRDVFV 759
Query: 246 LLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQG---LVLSQHYF 302
++PTGGGKSLC+Q I + G+ + ++ +Q L G +Q +
Sbjct: 760 MMPTGGGKSLCFQLPAI---VSGGVTVVVMPLVSLITDQLEQMQLLNVGCRAFAANQPWE 816
Query: 303 LHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVL 362
+ ++ R+ LL VTPE++ G+ L L+R+G
Sbjct: 817 EQKAVYD---ELRRGTGEIHLLLVTPEKLKGSSLLRSCLHELNREGC------------- 860
Query: 363 PHTCQRQLAGFVVDEAHCV 381
L F +DEAHCV
Sbjct: 861 -------LDRFAIDEAHCV 872
>gi|238760167|ref|ZP_04621314.1| ATP-dependent DNA helicase recQ [Yersinia aldovae ATCC 35236]
gi|238701603|gb|EEP94173.1| ATP-dependent DNA helicase recQ [Yersinia aldovae ATCC 35236]
Length = 605
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 76/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ QDC V++PTGGGKSLCYQ D
Sbjct: 16 FGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISLMKD 75
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A LNS QT Q AV+ R G +
Sbjct: 76 QVDQL-LAYGVGAGCLNSSQTREQQLAVMDGCRSGQI----------------------- 111
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+V +SF L LH Q + A VDEAH
Sbjct: 112 --KLLYIAPERLV-MESF---LDQLH---------------------QWRPALLAVDEAH 144
Query: 380 CV 381
C+
Sbjct: 145 CI 146
>gi|17366086|sp|Q9I920.1|BLM_CHICK RecName: Full=Bloom syndrome protein homolog; AltName: Full=RecQ
helicase homolog
gi|8567899|dbj|BAA96742.1| Gd BLM [Gallus gallus]
Length = 1142
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 77/182 (42%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 393 FGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIID 452
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L I AT+L T + A+ +L S+KD P
Sbjct: 453 QVQKLKT-LDIAATYLTGDITDADASKTYMQL----------------------SKKD-P 488
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 489 IIKLLYVTPEKVCASNRLLSALENLYDR--------------------KLLARFVIDEAH 528
Query: 380 CV 381
CV
Sbjct: 529 CV 530
>gi|170728871|ref|YP_001762897.1| ATP-dependent DNA helicase RecQ [Shewanella woodyi ATCC 51908]
gi|169814218|gb|ACA88802.1| ATP-dependent DNA helicase RecQ [Shewanella woodyi ATCC 51908]
Length = 608
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 81/193 (41%), Gaps = 72/193 (37%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ----------- 258
LD + + +FG R FR Q + + S + DC V++PTGGGKSLCYQ
Sbjct: 10 LDPLSLSLQSVFGYRTFRDGQKEVIEQSCSGYDCLVIMPTGGGKSLCYQLPALQLPGLTL 69
Query: 259 ----------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
DQ+ +L ++ G+ A +LNS Q ++A +LQ++ G
Sbjct: 70 VVSPLISLMKDQVDSL-IQMGVSAAYLNSSQPREESARILQQMHSG-------------- 114
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
KLLYV+PER++ F + L L+
Sbjct: 115 -----------ELKLLYVSPERLLQGH-FIDRLHELN----------------------- 139
Query: 369 QLAGFVVDEAHCV 381
L+ F +DEAHC+
Sbjct: 140 -LSLFAIDEAHCI 151
>gi|238789392|ref|ZP_04633178.1| ATP-dependent DNA helicase recQ [Yersinia frederiksenii ATCC 33641]
gi|238722535|gb|EEQ14189.1| ATP-dependent DNA helicase recQ [Yersinia frederiksenii ATCC 33641]
Length = 610
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 75/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A++A QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIINATLAGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A LNS QT Q AV+ R G +
Sbjct: 81 QVDQL-LAYGVGAGCLNSSQTREQQLAVMDGCRSGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+V +SF L LH Q + VDEAH
Sbjct: 117 --KLLYIAPERLV-MESF---LDQLH---------------------QWRPGLLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|170593171|ref|XP_001901338.1| Bloom's syndrome protein homolog [Brugia malayi]
gi|158591405|gb|EDP30018.1| Bloom's syndrome protein homolog, putative [Brugia malayi]
Length = 1054
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 70/164 (42%), Gaps = 29/164 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FR Q A A++ DCF+L+PTG GKSLCYQ I L GI +
Sbjct: 293 FGFNQFRHRQKHAIIAALLGYDCFILMPTGAGKSLCYQLPAI---LSKGITVVISPLKSL 349
Query: 281 VSQAAAVLQELR---QGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSF 337
+ ++EL L + I+ + S P KLLYVTPE+I ++
Sbjct: 350 IEDQKMKMKELEICCYALTSELNQAESDRIYSMLNES---SPKIKLLYVTPEKIAASEKL 406
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ + LHR+ L FVVDEAHCV
Sbjct: 407 NNMFFSLHRRD--------------------LLTRFVVDEAHCV 430
>gi|238798601|ref|ZP_04642077.1| ATP-dependent DNA helicase recQ [Yersinia mollaretii ATCC 43969]
gi|238717557|gb|EEQ09397.1| ATP-dependent DNA helicase recQ [Yersinia mollaretii ATCC 43969]
Length = 610
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 76/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A LNS QT Q AV+ R G +
Sbjct: 81 QVDQL-LAYGVGAGCLNSSQTREQQLAVMDGCRSGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+V +SF L LH Q + A VDEAH
Sbjct: 117 --KLLYIAPERLV-MESF---LDQLH---------------------QWRPALLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|392558417|gb|EIW51605.1| ATP-dependent DNA helicase [Trametes versicolor FP-101664 SS1]
Length = 717
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 78/183 (42%), Gaps = 59/183 (32%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG +FR Q C AS+ +D ++PTGGGKSL YQ
Sbjct: 4 VFGFDSFRLCQEGICNASMDGRDVVGIMPTGGGKSLGYQLPALMVSGCTLVISPLLALIR 63
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQI+ LN + G+ A L S + ++ + LR+ + H
Sbjct: 64 DQIMHLN-EAGVDAVMLTSATSQAEQNNIYSRLREMASGASH-----------------A 105
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
P KL YVTPE+I +++F+ L+ L+R +LA FV+DEA
Sbjct: 106 PEIKLCYVTPEKIAKSKTFTSALEKLYRVN--------------------KLARFVIDEA 145
Query: 379 HCV 381
HCV
Sbjct: 146 HCV 148
>gi|340386966|ref|XP_003391979.1| PREDICTED: Bloom syndrome protein-like, partial [Amphimedon
queenslandica]
Length = 175
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 41/155 (26%)
Query: 236 ASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQ-TVSQAAAVLQELRQG 294
A+V ++CF+L+PTGGGKSLCYQ +PA L+ VS +++Q+ Q
Sbjct: 2 AAVLGKNCFILMPTGGGKSLCYQ-----------LPALLLDGVTIVVSPLRSLIQDQVQK 50
Query: 295 L--------VLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHR 346
L LS Y + + V T SR D P KLLYVTPE++ + + L+ L+
Sbjct: 51 LNSLEISACHLSGEYSQSEELRVYTELSRLD-PGIKLLYVTPEKLAASTKLLKTLQSLYS 109
Query: 347 KGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+G I + FV+DEAHC+
Sbjct: 110 RGKI--------------------SRFVIDEAHCI 124
>gi|212556507|gb|ACJ28961.1| ATP-dependent DNA helicase RecQ [Shewanella piezotolerans WP3]
Length = 607
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FR Q + + A QDC V++PTGGGKSLCYQ
Sbjct: 20 VFGYRTFRDGQREVIEQICAGQDCLVIMPTGGGKSLCYQLPALQLPGLTVVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L ++ G+ A +LNS Q ++ +LQ++R G
Sbjct: 80 DQVDSL-IQTGVSAAYLNSSQPREESLKILQQMRYG------------------------ 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ SF + L L+ ++ F +DEA
Sbjct: 115 -ELKLLYVSPERLL-QASFIDRLHELN------------------------ISLFAIDEA 148
Query: 379 HCV 381
HC+
Sbjct: 149 HCI 151
>gi|308462738|ref|XP_003093650.1| CRE-HIM-6 protein [Caenorhabditis remanei]
gi|308249588|gb|EFO93540.1| CRE-HIM-6 protein [Caenorhabditis remanei]
Length = 1039
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 71/169 (42%), Gaps = 39/169 (23%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FR Q Q +++ D FVL+PTG GKSLCYQ +PA L
Sbjct: 277 FGFNQFRHRQKQCILSTLMGNDTFVLMPTGAGKSLCYQ-----------LPAVILPGVTV 325
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD--------KPSCKLLYVTPERIV 332
V L E ++ + L L+ +++D P+ KLLYVTPE+I
Sbjct: 326 VVSPLRSLIEDQKMKMKELGIGCEALTADLSAGAQEDIYSDLTSENPTIKLLYVTPEKIS 385
Query: 333 GNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ V LHR+G LA FV+DEAHCV
Sbjct: 386 ASGRLISVFYTLHRRG--------------------LLARFVIDEAHCV 414
>gi|335042077|ref|ZP_08535104.1| superfamily II DNA helicase [Methylophaga aminisulfidivorans MP]
gi|333788691|gb|EGL54573.1| superfamily II DNA helicase [Methylophaga aminisulfidivorans MP]
Length = 708
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 75/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
IFG FR QH + + D VL+PTGGGKSLCYQ
Sbjct: 15 IFGYNGFRHNQHDIVEHVIQGGDALVLMPTGGGKSLCYQIPALIRPGTGIVVSPLIALMQ 74
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ LN + G+ A FLNS + S+A +V Q+L GL+
Sbjct: 75 DQVVALN-ELGVKAAFLNSSLSASEAYSVEQQLEDGLI---------------------- 111
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+LY+ PER++ ++ S +L+ + L F +DEA
Sbjct: 112 ---DVLYIAPERLLNERTIS---------------LLSRVTISL----------FAIDEA 143
Query: 379 HCV 381
HCV
Sbjct: 144 HCV 146
>gi|145344767|ref|XP_001416896.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577122|gb|ABO95189.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 470
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 74/174 (42%), Gaps = 51/174 (29%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
F ++FR LQ A A++A +DC VL+PTGGGKSLCYQ +PA
Sbjct: 28 FNAKSFRSLQLLAVNATMAARDCLVLMPTGGGKSLCYQ-----------LPA-------V 69
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS-------------RKDKPSCKLLYVT 327
V V+ L+ Q + L ++ T S R P +LLYVT
Sbjct: 70 VKPGITVVISPLISLIQDQLHHLSEMGIPATVLSAAKDSDNTIYDDLRSPTPELRLLYVT 129
Query: 328 PERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
PE++V + L+ L+ +G L FV+DEAHC+
Sbjct: 130 PEKVVRSGKLKTALQRLYERG--------------------MLNRFVLDEAHCI 163
>gi|195396248|ref|XP_002056744.1| GJ10048 [Drosophila virilis]
gi|194143453|gb|EDW59856.1| GJ10048 [Drosophila virilis]
Length = 1324
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 75/182 (41%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG ++FRP Q Q A++ DCFVL+PTGGGKSLCYQ D
Sbjct: 564 FGLKSFRPNQLQVINAALLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKSLIFD 623
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L I A ++ +QT+ + + ++L C P
Sbjct: 624 QVNKL-ASLDICAKSMSGEQTLDEVMTIYRDLE-------------------C----HPP 659
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I + F + L L + ++ FV+DEAH
Sbjct: 660 LVKLLYVTPEKISSSARFQDTLDQL--------------------SANNYISRFVIDEAH 699
Query: 380 CV 381
CV
Sbjct: 700 CV 701
>gi|156085174|ref|XP_001610070.1| ATP-dependent DNA helicase, RecQ family protein [Babesia bovis]
gi|154797322|gb|EDO06502.1| ATP-dependent DNA helicase, RecQ family protein [Babesia bovis]
Length = 832
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 70/197 (35%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------- 257
D + N +F N FRP Q +A ++K+D FV++PTGGGKSLC+
Sbjct: 170 DAVHRINREVFKNPGFRPTQLEAINCILSKRDTFVVMPTGGGKSLCFQLPVVYDGMLRTG 229
Query: 258 -------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLH 304
QDQI LN GIP L + + S V +++R
Sbjct: 230 GVTVVVMPLVSLIQDQIKRLN-TLGIPCNALVGEISYSDREVVFEDIRS----------- 277
Query: 305 QLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPH 364
+ + SC +L+VTPERI +++ +V + L
Sbjct: 278 -----------RGEGSC-VLFVTPERITTSKAVLQVFRNLE------------------- 306
Query: 365 TCQRQLAGFVVDEAHCV 381
Q +L+ FV+DEAHCV
Sbjct: 307 -SQNRLSRFVIDEAHCV 322
>gi|294142824|ref|YP_003558802.1| ATP-dependent DNA helicase RecQ [Shewanella violacea DSS12]
gi|293329293|dbj|BAJ04024.1| ATP-dependent DNA helicase RecQ [Shewanella violacea DSS12]
Length = 610
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 80/193 (41%), Gaps = 72/193 (37%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ----------- 258
LD + + +FG R FR Q + + A DC V++PTGGGKSLCYQ
Sbjct: 12 LDPLSSSLQSVFGYRTFRKGQREVIEQICAGVDCLVIMPTGGGKSLCYQLPALQMPGLTI 71
Query: 259 ----------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
DQ+ +L + G+ A +LNS Q ++A +L+E+ G
Sbjct: 72 VVSPLISLMKDQVDSLQ-QMGVNAGYLNSSQAGQESARILREMHSG-------------- 116
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
KLLYV+PER++ SF + L LH
Sbjct: 117 -----------ELKLLYVSPERLL-QASFIDRLHELH----------------------- 141
Query: 369 QLAGFVVDEAHCV 381
++ F +DEAHC+
Sbjct: 142 -ISLFAIDEAHCI 153
>gi|238793565|ref|ZP_04637189.1| ATP-dependent DNA helicase recQ [Yersinia intermedia ATCC 29909]
gi|238727155|gb|EEQ18685.1| ATP-dependent DNA helicase recQ [Yersinia intermedia ATCC 29909]
Length = 610
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A LNS QT Q AV+ R G +
Sbjct: 81 QVDQL-LAYGVGAGCLNSSQTREQQLAVMDGCRSGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+V +SF L Q + A VDEAH
Sbjct: 117 --KLLYIAPERLV-MESF------------------------LDQLYQWRPALLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|53133486|emb|CAG32072.1| hypothetical protein RCJMB04_17c23 [Gallus gallus]
Length = 1183
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 434 FGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIID 493
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L I +T+L T + A+ +L S+KD P
Sbjct: 494 QVQKLKT-LDIASTYLTGDITDADASKTYMQL----------------------SKKD-P 529
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 530 IIKLLYVTPEKVCASNRLLSALENLYNR--------------------KLLARFVIDEAH 569
Query: 380 CV 381
CV
Sbjct: 570 CV 571
>gi|402471219|gb|EJW05076.1| RecQ family ATP-dependent DNA helicase [Edhazardia aedis USNM 41457]
Length = 1768
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 29/163 (17%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQ 278
+F + FR Q + +A+++ D FVL+PTGGGKS+C+Q IIT + + + L+
Sbjct: 1063 VFKLQNFRSQQKEVIEAALSHDDVFVLMPTGGGKSICFQLPAIITDGITL-VVSPLLSLI 1121
Query: 279 QTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFS 338
Q Q +L++ L +S + FV + D P CK+ YVTPE IV + F
Sbjct: 1122 Q--DQIKNLLKKNIIALAISSQLTETERRFVFEILKQPD-PICKIFYVTPELIVNSSLFQ 1178
Query: 339 EVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
++++ + ++A V+DEAHCV
Sbjct: 1179 DIIR------------------------KTKVARIVIDEAHCV 1197
>gi|350295161|gb|EGZ76138.1| hypothetical protein NEUTE2DRAFT_97732 [Neurospora tetrasperma FGSC
2509]
Length = 1994
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 39/224 (17%)
Query: 173 CKSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFA--NVVI------FGNR 224
+S +STS+A+++ +KR+ + + +L + + M++A N V F
Sbjct: 879 SQSVMSTSTATTIKPRKRNENANTKKAKSLHAKLSMPPEKMKYAWSNDVRKALKDRFRMS 938
Query: 225 AFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATFLNSQ 278
FR Q +A A++ +D FVL+PTGGGKSLCYQ ++ GI P L
Sbjct: 939 GFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVRSGKTRGITVVISPLLSLMLD 998
Query: 279 QTVSQAAAVLQELR-QGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSF 337
Q A ++Q G + S+ + +++F A + +LLYVTPE + NQ+F
Sbjct: 999 QVNHLANLMIQAYAFNGDMNSE---MRRMVFQKLDAEHPEH-ELQLLYVTPEMVSKNQTF 1054
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ L+R+ ++LA V+DEAHCV
Sbjct: 1055 VNKMMDLYRR--------------------KKLARIVIDEAHCV 1078
>gi|336465540|gb|EGO53780.1| hypothetical protein NEUTE1DRAFT_93386 [Neurospora tetrasperma FGSC
2508]
Length = 2005
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 39/224 (17%)
Query: 173 CKSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFA--NVVI------FGNR 224
+S +STS+A+++ +KR+ + + +L + + M++A N V F
Sbjct: 890 SQSVMSTSTATTIKPRKRNENANTKKAKSLHAKLSMPPEKMKYAWSNDVRKALKDRFRMS 949
Query: 225 AFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATFLNSQ 278
FR Q +A A++ +D FVL+PTGGGKSLCYQ ++ GI P L
Sbjct: 950 GFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVRSGKTRGITVVISPLLSLMLD 1009
Query: 279 QTVSQAAAVLQELR-QGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSF 337
Q A ++Q G + S+ + +++F A + +LLYVTPE + NQ+F
Sbjct: 1010 QVNHLANLMIQAYAFNGDMNSE---MRRMVFQKLDAEHPEH-ELQLLYVTPEMVSKNQTF 1065
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ L+R+ ++LA V+DEAHCV
Sbjct: 1066 VNKMMDLYRR--------------------KKLARIVIDEAHCV 1089
>gi|356532786|ref|XP_003534951.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Glycine max]
Length = 732
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 76/182 (41%), Gaps = 66/182 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR +Q A +A ++ +DCF L+PTGGGKS+CYQ +
Sbjct: 34 FGYPDFRDMQLDAIQAVLSGKDCFCLMPTGGGKSMCYQIPALAKAGIVLVVCPLIALMEN 93
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L K GI A FL+S +T + ++L G KP
Sbjct: 94 QVMALKEK-GIAAEFLSSTKTTDAKVKIHEDLDSG-----------------------KP 129
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
S +LLYVTPE ++ F L ++ +G + L +DEAH
Sbjct: 130 STRLLYVTPE-LITTPGFMTKLTKIYTRGLLNL--------------------IAIDEAH 168
Query: 380 CV 381
C+
Sbjct: 169 CI 170
>gi|397614043|gb|EJK62561.1| hypothetical protein THAOC_16821 [Thalassiosira oceanica]
Length = 1292
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 66/186 (35%)
Query: 219 VIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-------------------- 258
+FG+ FRP Q + + ++ +D FVLLPTGGGKSLCYQ
Sbjct: 463 TMFGHDRFRPGQQEVIENAMRGRDVFVLLPTGGGKSLCYQLPAWCQPGLSVVISPLLALM 522
Query: 259 -DQIITLNLKFGIPATFLNSQQTVS-QAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRK 316
DQ+ ++ ++ G+ + FLNS Q+ + ++Q+L Q L+ H +
Sbjct: 523 EDQVQSM-VRAGVESVFLNSTQSYEDEQQFIVQKLNQ---LTPHGGI------------- 565
Query: 317 DKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAG-FVV 375
KLLYVTPE++ + +++ L QR L FVV
Sbjct: 566 -----KLLYVTPEKLTHSGMIRGIIQSL---------------------SQRNLVSRFVV 599
Query: 376 DEAHCV 381
DEAHC+
Sbjct: 600 DEAHCL 605
>gi|408399479|gb|EKJ78580.1| hypothetical protein FPSE_01246 [Fusarium pseudograminearum CS3096]
Length = 1673
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATF 274
F + FR Q +A A++ +D FVL+PTGGGKSLCYQ ++ G+ P
Sbjct: 829 FRMKGFRCNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVKTGKTRGVTIVVSPLLS 888
Query: 275 LNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGN 334
L Q A +Q + S Y Q++ R + +LLYVTPE + N
Sbjct: 889 LMQDQVDHMKALGIQAVAFNGECSAEY-KRQVMSAFN--ERSPEHFLELLYVTPEMVSKN 945
Query: 335 QSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+F+ L+ LHRKG + A V+DEAHCV
Sbjct: 946 ANFNNGLQTLHRKG--------------------KFARLVIDEAHCV 972
>gi|22124312|ref|NP_667735.1| ATP-dependent DNA helicase RecQ [Yersinia pestis KIM10+]
gi|45442967|ref|NP_994506.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Microtus
str. 91001]
gi|51594557|ref|YP_068748.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis IP
32953]
gi|108806187|ref|YP_650103.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Antiqua]
gi|108810297|ref|YP_646064.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Nepal516]
gi|145600700|ref|YP_001164776.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Pestoides F]
gi|153947607|ref|YP_001399215.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis IP
31758]
gi|153997111|ref|ZP_02022244.1| ATP-dependent DNA helicase [Yersinia pestis CA88-4125]
gi|162418857|ref|YP_001605148.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Angola]
gi|165926240|ref|ZP_02222072.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939115|ref|ZP_02227666.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011675|ref|ZP_02232573.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166213635|ref|ZP_02239670.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167401854|ref|ZP_02307342.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167421077|ref|ZP_02312830.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426281|ref|ZP_02318034.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167469646|ref|ZP_02334350.1| ATP-dependent DNA helicase RecQ [Yersinia pestis FV-1]
gi|218930836|ref|YP_002348711.1| ATP-dependent DNA helicase RecQ [Yersinia pestis CO92]
gi|229837162|ref|ZP_04457327.1| ATP-dependent DNA helicase [Yersinia pestis Pestoides A]
gi|229839522|ref|ZP_04459681.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229900085|ref|ZP_04515222.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229900469|ref|ZP_04515598.1| ATP-dependent DNA helicase [Yersinia pestis Nepal516]
gi|270488824|ref|ZP_06205898.1| ATP-dependent DNA helicase RecQ [Yersinia pestis KIM D27]
gi|294505497|ref|YP_003569559.1| ATP-dependent DNA helicase [Yersinia pestis Z176003]
gi|384123966|ref|YP_005506586.1| ATP-dependent DNA helicase [Yersinia pestis D106004]
gi|384127827|ref|YP_005510441.1| ATP-dependent DNA helicase [Yersinia pestis D182038]
gi|384138308|ref|YP_005521010.1| ATP-dependent DNA helicase RecQ [Yersinia pestis A1122]
gi|384413065|ref|YP_005622427.1| ATP-dependent DNA helicase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|420549046|ref|ZP_15046797.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-01]
gi|420554379|ref|ZP_15051553.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-02]
gi|420560006|ref|ZP_15056434.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-03]
gi|420565382|ref|ZP_15061272.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-04]
gi|420581390|ref|ZP_15075799.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-07]
gi|420586787|ref|ZP_15080681.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-08]
gi|420591869|ref|ZP_15085252.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-09]
gi|420597248|ref|ZP_15090090.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-10]
gi|420602944|ref|ZP_15095145.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-11]
gi|420608335|ref|ZP_15100039.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-12]
gi|420613725|ref|ZP_15104865.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-13]
gi|420619086|ref|ZP_15109540.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-14]
gi|420624397|ref|ZP_15114328.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-15]
gi|420629378|ref|ZP_15118846.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-16]
gi|420639815|ref|ZP_15128223.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-25]
gi|420645253|ref|ZP_15133196.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-29]
gi|420650581|ref|ZP_15137995.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-32]
gi|420661646|ref|ZP_15147913.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-36]
gi|420666997|ref|ZP_15152736.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-42]
gi|420671856|ref|ZP_15157169.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-45]
gi|420682761|ref|ZP_15167043.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-47]
gi|420688171|ref|ZP_15171857.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-48]
gi|420693441|ref|ZP_15176465.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-52]
gi|420699163|ref|ZP_15181511.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-53]
gi|420705063|ref|ZP_15186161.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-54]
gi|420710327|ref|ZP_15190893.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-55]
gi|420721372|ref|ZP_15200506.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-58]
gi|420726804|ref|ZP_15205306.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-59]
gi|420732302|ref|ZP_15210251.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-60]
gi|420737293|ref|ZP_15214760.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-61]
gi|420742774|ref|ZP_15219685.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-63]
gi|420753919|ref|ZP_15229361.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-65]
gi|420765089|ref|ZP_15238752.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-71]
gi|420780906|ref|ZP_15252870.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-88]
gi|420797138|ref|ZP_15267335.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-91]
gi|420802233|ref|ZP_15271911.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-92]
gi|420812973|ref|ZP_15281585.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-94]
gi|420818445|ref|ZP_15286557.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-95]
gi|420823785|ref|ZP_15291325.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-96]
gi|420828848|ref|ZP_15295891.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-98]
gi|420834430|ref|ZP_15300927.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-99]
gi|420839377|ref|ZP_15305399.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-100]
gi|420844579|ref|ZP_15310118.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-101]
gi|420850225|ref|ZP_15315189.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-102]
gi|420855965|ref|ZP_15320020.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-103]
gi|420861052|ref|ZP_15324517.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-113]
gi|421765358|ref|ZP_16202143.1| ATP-dependent DNA helicase RecQ [Yersinia pestis INS]
gi|21957085|gb|AAM83986.1|AE013640_5 ATP-dependent DNA helicase [Yersinia pestis KIM10+]
gi|45437834|gb|AAS63383.1| ATP-dependent DNA helicase [Yersinia pestis biovar Microtus str.
91001]
gi|51587839|emb|CAH19442.1| ATP-dependent DNA helicase [Yersinia pseudotuberculosis IP 32953]
gi|108773945|gb|ABG16464.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Nepal516]
gi|108778100|gb|ABG12158.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Antiqua]
gi|115349447|emb|CAL22420.1| ATP-dependent DNA helicase [Yersinia pestis CO92]
gi|145212396|gb|ABP41803.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Pestoides F]
gi|149289417|gb|EDM39495.1| ATP-dependent DNA helicase [Yersinia pestis CA88-4125]
gi|152959102|gb|ABS46563.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis IP
31758]
gi|162351672|gb|ABX85620.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Angola]
gi|165912888|gb|EDR31514.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. IP275]
gi|165921764|gb|EDR38961.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989444|gb|EDR41745.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166205308|gb|EDR49788.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166961206|gb|EDR57227.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167048747|gb|EDR60155.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167054800|gb|EDR64604.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229682488|gb|EEO78575.1| ATP-dependent DNA helicase [Yersinia pestis Nepal516]
gi|229686865|gb|EEO78944.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695888|gb|EEO85935.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229706105|gb|EEO92114.1| ATP-dependent DNA helicase [Yersinia pestis Pestoides A]
gi|262363562|gb|ACY60283.1| ATP-dependent DNA helicase [Yersinia pestis D106004]
gi|262367491|gb|ACY64048.1| ATP-dependent DNA helicase [Yersinia pestis D182038]
gi|270337328|gb|EFA48105.1| ATP-dependent DNA helicase RecQ [Yersinia pestis KIM D27]
gi|294355956|gb|ADE66297.1| ATP-dependent DNA helicase [Yersinia pestis Z176003]
gi|320013569|gb|ADV97140.1| ATP-dependent DNA helicase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342853437|gb|AEL71990.1| ATP-dependent DNA helicase RecQ [Yersinia pestis A1122]
gi|391421158|gb|EIQ83878.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-01]
gi|391421371|gb|EIQ84073.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-02]
gi|391421448|gb|EIQ84143.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-03]
gi|391436188|gb|EIQ97169.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-04]
gi|391453252|gb|EIR12582.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-07]
gi|391453411|gb|EIR12729.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-08]
gi|391455260|gb|EIR14393.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-09]
gi|391469060|gb|EIR26879.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-10]
gi|391469818|gb|EIR27555.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-11]
gi|391471272|gb|EIR28850.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-12]
gi|391484954|gb|EIR41152.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-13]
gi|391486455|gb|EIR42485.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-15]
gi|391486548|gb|EIR42569.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-14]
gi|391501084|gb|EIR55520.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-16]
gi|391506158|gb|EIR60104.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-25]
gi|391517115|gb|EIR69950.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-29]
gi|391518917|gb|EIR71596.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-32]
gi|391531438|gb|EIR82932.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-36]
gi|391534305|gb|EIR85494.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-42]
gi|391536661|gb|EIR87623.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-45]
gi|391550077|gb|EIR99727.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-47]
gi|391550347|gb|EIR99969.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-48]
gi|391564613|gb|EIS12805.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-52]
gi|391566044|gb|EIS14081.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-53]
gi|391569386|gb|EIS16980.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-54]
gi|391579599|gb|EIS25700.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-55]
gi|391591637|gb|EIS36175.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-58]
gi|391595137|gb|EIS39212.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-60]
gi|391595868|gb|EIS39867.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-59]
gi|391609696|gb|EIS52066.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-61]
gi|391610048|gb|EIS52385.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-63]
gi|391623135|gb|EIS63973.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-65]
gi|391633409|gb|EIS72815.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-71]
gi|391648413|gb|EIS85930.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-88]
gi|391666018|gb|EIT01535.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-91]
gi|391675612|gb|EIT10109.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-92]
gi|391675850|gb|EIT10329.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-94]
gi|391689548|gb|EIT22669.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-95]
gi|391691498|gb|EIT24422.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-96]
gi|391693223|gb|EIT25990.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-98]
gi|391706602|gb|EIT38024.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-99]
gi|391707573|gb|EIT38908.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-100]
gi|391710357|gb|EIT41433.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-101]
gi|391722570|gb|EIT52360.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-102]
gi|391722697|gb|EIT52473.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-103]
gi|391723511|gb|EIT53184.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-113]
gi|411173338|gb|EKS43383.1| ATP-dependent DNA helicase RecQ [Yersinia pestis INS]
Length = 610
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A LNS QT Q AV+ R G +
Sbjct: 81 QVDQL-LAYGVGAGCLNSSQTREQQLAVMDGCRSGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+V +SF L Q + A VDEAH
Sbjct: 117 --KLLYIAPERLV-MESF------------------------LDQLYQWRPALLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|443316688|ref|ZP_21046123.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 6406]
gi|442783715|gb|ELR93620.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 6406]
Length = 720
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 80/194 (41%), Gaps = 68/194 (35%)
Query: 209 ALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY----------- 257
A +E A FG FR Q A +A + +QD V++PTGGGKSLCY
Sbjct: 8 AFPSLEAALKHFFGYDQFRLQQRAAIEAVLNQQDALVVMPTGGGKSLCYQLPALLRLGVT 67
Query: 258 ----------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLI 307
QDQ+ LN GI ATFLNS + +A + +L QG
Sbjct: 68 IVVSPLIALMQDQVEALN-NNGIAATFLNSSLDLMEARSREYDLLQG------------- 113
Query: 308 FVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQ 367
KLLYV PER++ +++F L L + Q
Sbjct: 114 ------------RTKLLYVAPERLL-SENFWPFLTRLQQ--------------------Q 140
Query: 368 RQLAGFVVDEAHCV 381
LAGF +DEAHCV
Sbjct: 141 VGLAGFAIDEAHCV 154
>gi|342879842|gb|EGU81076.1| hypothetical protein FOXB_08424 [Fusarium oxysporum Fo5176]
Length = 1668
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 75/168 (44%), Gaps = 31/168 (18%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATF 274
F + FR Q +A A++ QD FVL+PTGGGKSLCYQ ++ G+ P
Sbjct: 823 FRMKGFRCNQLEAINATLGGQDAFVLMPTGGGKSLCYQLPAVVKTGKTRGVTIVVSPLLS 882
Query: 275 LNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS-CKLLYVTPERIVG 333
L Q A +Q + S Y V++ + K +LLYVTPE +
Sbjct: 883 LMQDQVDHMKALGIQAVAFNGECSAEYKRQ----VMSAFNEKSPEHFLELLYVTPEMVSK 938
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
N +F+ L+ LHRKG + A V+DEAHCV
Sbjct: 939 NVNFNSGLETLHRKG--------------------KFARLVIDEAHCV 966
>gi|324502420|gb|ADY41066.1| Bloom syndrome protein [Ascaris suum]
Length = 1090
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 67/161 (41%), Gaps = 23/161 (14%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FR Q A A++ DCFVL+PTG GKSLCYQ + L G+ +
Sbjct: 313 FGFNQFRHRQKTAIIAALLGYDCFVLMPTGAGKSLCYQLPSV---LSGGVTVVISPLKSL 369
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEV 340
+ +++L + A + P LLYVTPE+I ++ + V
Sbjct: 370 IEDQKTKMKQLEINCCALTSDLSQAESDRIYAALSETNPKINLLYVTPEKIAASEKLNNV 429
Query: 341 LKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
LHR+G L FV+DEAHC+
Sbjct: 430 FASLHRRG--------------------LLTRFVIDEAHCI 450
>gi|392553532|ref|ZP_10300669.1| ATP-dependent DNA helicase [Pseudoalteromonas spongiae
UST010723-006]
Length = 607
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 75/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG + FR Q Q A +A QDC VL+PTGGGKSLCY Q
Sbjct: 23 VFGYKQFRAGQEQVIDAVLAGQDCLVLMPTGGGKSLCYQVPALLLPGITIVVSPLISLMQ 82
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A ++N+ Q+ + + Q L QG +
Sbjct: 83 DQVAQLKAQ-GVAAAYINNSQSREEQQLIYQGLHQGQI---------------------- 119
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
K+LYV PER++ + FS L+ L+ + F +DEA
Sbjct: 120 ---KILYVAPERLLTD-DFSTRLQHLN------------------------IGLFAIDEA 151
Query: 379 HCV 381
HCV
Sbjct: 152 HCV 154
>gi|290490724|dbj|BAI79322.1| BLM helicase [Gallus gallus]
Length = 1380
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 77/182 (42%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 631 FGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIID 690
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L I AT+L T + A+ +L S+KD P
Sbjct: 691 QVQKLKT-LDIAATYLTGDITDADASKTYMQL----------------------SKKD-P 726
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ + + LA FV+DEAH
Sbjct: 727 IIKLLYVTPEKVCASNRLLSALENLYDR--------------------KLLARFVIDEAH 766
Query: 380 CV 381
CV
Sbjct: 767 CV 768
>gi|170026209|ref|YP_001722714.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis YPIII]
gi|186893559|ref|YP_001870671.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis PB1/+]
gi|420570412|ref|ZP_15065845.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-05]
gi|420576075|ref|ZP_15070964.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-06]
gi|420634593|ref|ZP_15123519.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-19]
gi|420656190|ref|ZP_15143047.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-34]
gi|420677196|ref|ZP_15162026.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-46]
gi|420715828|ref|ZP_15195768.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-56]
gi|420748668|ref|ZP_15224634.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-64]
gi|420759919|ref|ZP_15234148.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-66]
gi|420770307|ref|ZP_15243422.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-72]
gi|420775288|ref|ZP_15247941.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-76]
gi|420786536|ref|ZP_15257793.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-89]
gi|420791561|ref|ZP_15262319.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-90]
gi|420807567|ref|ZP_15276750.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-93]
gi|169752743|gb|ACA70261.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis YPIII]
gi|186696585|gb|ACC87214.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis PB1/+]
gi|391437458|gb|EIQ98312.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-05]
gi|391441078|gb|EIR01593.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-06]
gi|391501167|gb|EIR55597.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-19]
gi|391518233|gb|EIR70963.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-34]
gi|391549862|gb|EIR99531.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-46]
gi|391581169|gb|EIS27080.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-56]
gi|391611365|gb|EIS53551.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-64]
gi|391626018|gb|EIS66438.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-66]
gi|391635100|gb|EIS74299.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-72]
gi|391645325|gb|EIS83215.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-76]
gi|391652808|gb|EIS89836.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-89]
gi|391658455|gb|EIS94858.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-90]
gi|391675277|gb|EIT09812.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-93]
Length = 597
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ QDC V++PTGGGKSLCYQ D
Sbjct: 8 FGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISLMKD 67
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A LNS QT Q AV+ R G +
Sbjct: 68 QVDQL-LAYGVGAGCLNSSQTREQQLAVMDGCRSGQI----------------------- 103
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+V +SF L Q + A VDEAH
Sbjct: 104 --KLLYIAPERLV-MESF------------------------LDQLYQWRPALLAVDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|238786204|ref|ZP_04630153.1| ATP-dependent DNA helicase recQ [Yersinia bercovieri ATCC 43970]
gi|238712894|gb|EEQ04957.1| ATP-dependent DNA helicase recQ [Yersinia bercovieri ATCC 43970]
Length = 610
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 75/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A++ QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIINATLEGQDCLVVMPTGGGKSLCYQIPALVTDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A LNS QT Q AV+ R G +
Sbjct: 81 QVDQL-LAYGVGAGCLNSSQTREQQLAVMDGCRSGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+V +SF L LH Q + A VDEAH
Sbjct: 117 --KLLYIAPERLV-MESF---LDQLH---------------------QWRPALLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|378733670|gb|EHY60129.1| bloom syndrome protein [Exophiala dermatitidis NIH/UT8656]
Length = 1681
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 76/186 (40%), Gaps = 67/186 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY----------------------- 257
F R FR Q +A A+++ +D FVL+PTGGGKSLCY
Sbjct: 826 FHLRGFRHNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVVQSGHTRGVTIVISPLLS 885
Query: 258 --QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
QDQ+ L I A +N + TV+ +L LR S H F+
Sbjct: 886 LMQDQVEHLKA-LNIQAQLINGETTVAHRKTILDHLRGD---SPHDFV------------ 929
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
+LLYVTPE + NQ+F + LH + C LA V+
Sbjct: 930 ------QLLYVTPEMVNQNQTFVRAFEGLHSR------------------C--LLARIVI 963
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 964 DEAHCV 969
>gi|158338684|ref|YP_001519861.1| ATP-dependent DNA helicase RecQ [Acaryochloris marina MBIC11017]
gi|158308925|gb|ABW30542.1| ATP-dependent DNA helicase RecQ [Acaryochloris marina MBIC11017]
Length = 736
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 75/182 (41%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG FR Q +A++ +QD V++PTGGGKSLC+ QD
Sbjct: 23 FGYDQFRVGQRPVIEAALQRQDLMVVMPTGGGKSLCFQLPGLLLPGLTVVISPLIALMQD 82
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL + IPATFLNS + A + E+ G +
Sbjct: 83 QVTTLQVN-DIPATFLNSSIDAATARQRISEIYSGKI----------------------- 118
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ N+SF +L + Q LA F VDEAH
Sbjct: 119 --KLLYVAPERLL-NESFLNLLDQVQ--------------------AQVGLAAFAVDEAH 155
Query: 380 CV 381
CV
Sbjct: 156 CV 157
>gi|46107336|ref|XP_380727.1| hypothetical protein FG00551.1 [Gibberella zeae PH-1]
Length = 1672
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATF 274
F + FR Q +A A++ +D FVL+PTGGGKSLCYQ ++ G+ P
Sbjct: 828 FRMKGFRCNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVKTGKTRGVTIVVSPLLS 887
Query: 275 LNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGN 334
L Q A +Q + S Y Q++ R + +LLYVTPE + N
Sbjct: 888 LMQDQVDHMKALGIQAVAFNGECSAEY-KRQVMSAFN--ERSPEHFLELLYVTPEMVSKN 944
Query: 335 QSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+F+ L+ LHRKG + A V+DEAHCV
Sbjct: 945 ANFNNGLQTLHRKG--------------------KFARLVIDEAHCV 971
>gi|25145561|ref|NP_502390.2| Protein HIM-6 [Caenorhabditis elegans]
gi|28201770|sp|O18017.2|BLM_CAEEL RecName: Full=Bloom syndrome protein homolog; AltName: Full=High
incidence of males protein 6; AltName: Full=RecQ
helicase homolog
gi|20853750|gb|AAM26298.1| RecQ helicase [Caenorhabditis elegans]
gi|22859109|emb|CAB05609.2| Protein HIM-6 [Caenorhabditis elegans]
Length = 988
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 71/164 (43%), Gaps = 29/164 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FR Q Q +++ D FVL+PTG GKSLCYQ + L G+ +
Sbjct: 243 FGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILP---GVTVVVSPLRSL 299
Query: 281 VSQAAAVLQELRQG---LVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSF 337
+ ++EL G L + I+ + PS KLLYVTPE+I +
Sbjct: 300 IEDQKMKMKELGIGCEALTADLGAPAQEKIYAELGSG---NPSIKLLYVTPEKISASGRL 356
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ V LHR+G LA FV+DEAHCV
Sbjct: 357 NSVFFDLHRRG--------------------LLARFVIDEAHCV 380
>gi|390940709|ref|YP_006404446.1| ATP-dependent DNA helicase RecQ [Sulfurospirillum barnesii SES-3]
gi|390193816|gb|AFL68871.1| ATP-dependent DNA helicase RecQ [Sulfurospirillum barnesii SES-3]
Length = 596
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 75/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG+ +FR Q +A A +A +D ++LPTG GKSLCYQ
Sbjct: 11 VFGHHSFRANQEEAVNAILAHKDLMMILPTGAGKSLCYQLPSLVMEGMSVVISPLLALMH 70
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQI L+ FGI A ++S Q+ SQ +Q R G
Sbjct: 71 DQITALS-AFGIKAAMISSMQSPSQIQESMQACRNG------------------------ 105
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PER+ G +SF L+ L C + FV+DEA
Sbjct: 106 -ELKLLYVAPERLKG-ESFLNFLQSL---------------------C---INFFVIDEA 139
Query: 379 HCV 381
HCV
Sbjct: 140 HCV 142
>gi|113971918|ref|YP_735711.1| ATP-dependent DNA helicase RecQ [Shewanella sp. MR-4]
gi|113886602|gb|ABI40654.1| ATP-dependent DNA helicase RecQ [Shewanella sp. MR-4]
Length = 607
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 77/183 (42%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FR Q + + + +DC V++PTGGGKSLCYQ
Sbjct: 20 VFGYRDFRDGQREVIERVCSGEDCLVIMPTGGGKSLCYQLPALLMPGITIVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L L+ G+ A +LNS Q Q+ VL++L +G
Sbjct: 80 DQVDSL-LQTGVNAAYLNSSQPREQSVEVLRQLHRG------------------------ 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ F E ++ L L+ F +DEA
Sbjct: 115 -ELKLLYVSPERLL-TADFIERMRSL------------------------PLSMFAIDEA 148
Query: 379 HCV 381
HC+
Sbjct: 149 HCI 151
>gi|157373532|ref|YP_001472132.1| ATP-dependent DNA helicase RecQ [Shewanella sediminis HAW-EB3]
gi|157315906|gb|ABV35004.1| ATP-dependent DNA helicase RecQ [Shewanella sediminis HAW-EB3]
Length = 607
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 72/193 (37%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ----------- 258
LD + + +FG R FR Q + + S + DC V++PTGGGKSLCYQ
Sbjct: 10 LDPLSSSLQSVFGYRTFREGQREVIEQSCSGYDCLVIMPTGGGKSLCYQLPALQLPGLTI 69
Query: 259 ----------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
DQ+ +L + G+ A +LNS ++A +LQ++ +G +
Sbjct: 70 VVSPLISLMKDQVDSLT-QMGVSAAYLNSSLPREESARILQQMHKGEI------------ 116
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
KLLYV+PER++ F + L LH
Sbjct: 117 -------------KLLYVSPERLLQGH-FIDRLHELH----------------------- 139
Query: 369 QLAGFVVDEAHCV 381
++ F +DEAHC+
Sbjct: 140 -ISLFAIDEAHCI 151
>gi|320167845|gb|EFW44744.1| DEAD/DEAH box helicase [Capsaspora owczarzaki ATCC 30864]
Length = 1784
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 66/192 (34%)
Query: 212 DMEFANVVIFG-NRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------- 257
D++ A +FG N+ FR Q + +++ + C VL+PTGGGKSLCY
Sbjct: 822 DVQKAMRKVFGLNKGFRTHQLEVINCTMSGRHCLVLMPTGGGKSLCYQNPAVISKGVTIV 881
Query: 258 --------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
QDQ+ L ++ I A FL+ QT ++ + V EL
Sbjct: 882 VSPLLSLIQDQVEAL-VQLNIGAVFLSGSQTEAEQSRVYLEL------------------ 922
Query: 310 LTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
SR+D+ CK++Y+TPE+I + L L++ ++
Sbjct: 923 ----SRQDE-RCKVVYMTPEKISHSTRLLSQLDMLYQS--------------------KR 957
Query: 370 LAGFVVDEAHCV 381
LA FV+DEAHCV
Sbjct: 958 LARFVIDEAHCV 969
>gi|149049048|gb|EDM01502.1| rCG29929, isoform CRA_b [Rattus norvegicus]
Length = 645
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 78/182 (42%), Gaps = 65/182 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F + FRPLQ + A++A++D F+++PTGGGKSLCYQ
Sbjct: 86 VFKLQKFRPLQLETVNATMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLME 145
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + GI AT LNS + V E+ ++++ L
Sbjct: 146 DQLMVLQ-QLGISATMLNSSSSKEHVKCVHTEM-----MNKNSHL--------------- 184
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YVTPE+I ++ F L+ + G +L G VDE
Sbjct: 185 ---KLIYVTPEKIAKSKMFMSRLEKAYEAG--------------------RLTGVAVDEV 221
Query: 379 HC 380
HC
Sbjct: 222 HC 223
>gi|47224193|emb|CAG13113.1| unnamed protein product [Tetraodon nigroviridis]
Length = 827
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 75/182 (41%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A A++ +D FVL+PTGGGKSLCYQ D
Sbjct: 27 FGLHQFRFNQLEAINATLGGEDTFVLMPTGGGKSLCYQLPACVSPGVTVVISPLKSLIVD 86
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
QI L IPAT L+ +A + +L SRK+ P
Sbjct: 87 QIQKLTT-LDIPATSLSGDLGDREAGRIYMQL----------------------SRKE-P 122
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ + L+ L+ +G LA FV+DEAH
Sbjct: 123 IVKLLYVTPEKVSASNKLISALQNLYERG--------------------LLARFVIDEAH 162
Query: 380 CV 381
CV
Sbjct: 163 CV 164
>gi|357445429|ref|XP_003592992.1| ATP-dependent DNA helicase Q1, partial [Medicago truncatula]
gi|355482040|gb|AES63243.1| ATP-dependent DNA helicase Q1, partial [Medicago truncatula]
Length = 556
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 80/191 (41%), Gaps = 65/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------- 257
++E N +FGN +FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 378 ELEVNNKKVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALINPGITLVI 437
Query: 258 -------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
QDQI+ L L+ I A +L++ ++ +L+EL
Sbjct: 438 SPLVSLIQDQIMHL-LQANITAAYLSANLEWAEQQEILREL------------------- 477
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
D KLLYVTPE++ + L+ LH + L
Sbjct: 478 ----NSDYCKYKLLYVTPEKVGRSDVLLRQLESLHGR--------------------ELL 513
Query: 371 AGFVVDEAHCV 381
+ V+DEAHCV
Sbjct: 514 SRIVIDEAHCV 524
>gi|58865766|ref|NP_001012098.1| ATP-dependent DNA helicase Q1 [Rattus norvegicus]
gi|81910891|sp|Q6AYJ1.1|RECQ1_RAT RecName: Full=ATP-dependent DNA helicase Q1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|50925619|gb|AAH79026.1| RecQ protein-like (DNA helicase Q1-like) [Rattus norvegicus]
gi|149049049|gb|EDM01503.1| rCG29929, isoform CRA_c [Rattus norvegicus]
Length = 621
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 78/182 (42%), Gaps = 65/182 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F + FRPLQ + A++A++D F+++PTGGGKSLCYQ
Sbjct: 86 VFKLQKFRPLQLETVNATMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLME 145
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + GI AT LNS + V E+ ++++ L
Sbjct: 146 DQLMVLQ-QLGISATMLNSSSSKEHVKCVHTEM-----MNKNSHL--------------- 184
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YVTPE+I ++ F L+ + G +L G VDE
Sbjct: 185 ---KLIYVTPEKIAKSKMFMSRLEKAYEAG--------------------RLTGVAVDEV 221
Query: 379 HC 380
HC
Sbjct: 222 HC 223
>gi|50123092|ref|YP_052259.1| ATP-dependent DNA helicase RecQ [Pectobacterium atrosepticum
SCRI1043]
gi|49613618|emb|CAG77069.1| ATP-dependent DNA helicase [Pectobacterium atrosepticum SCRI1043]
Length = 608
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 72/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L +G+ A LNS QT Q V+ R G +
Sbjct: 81 QVDQLQ-AYGVSAACLNSTQTREQQFEVMAGCRTGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+ +SF L H Q++ VDEAH
Sbjct: 117 --KLLYIAPERLT-TESF------------------------LDHLAHWQISLIAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|358054510|dbj|GAA99436.1| hypothetical protein E5Q_06135 [Mixia osmundae IAM 14324]
Length = 1229
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 33/165 (20%)
Query: 225 AFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPA------TFLNS 277
+FRP Q +A A++A D F+L+PTGGGKSLCYQ ++ G+ + ++
Sbjct: 495 SFRPNQLKAINATLAADDVFILMPTGGGKSLCYQLPAVVQSGKTRGVSIVISPLLSLIHD 554
Query: 278 Q-QTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQS 336
Q Q + + L S F +I L A +P C L+YVTPE I +
Sbjct: 555 QCQALMDKDVIALAFNSDLKKSDRDF---VINELRTADDDTRP-C-LIYVTPEMIAKSTL 609
Query: 337 FSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F +VL+ LHR+ ++LA FV+DEAHC+
Sbjct: 610 FKDVLRNLHRR--------------------QRLARFVIDEAHCI 634
>gi|255932597|ref|XP_002557855.1| Pc12g10330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582474|emb|CAP80660.1| Pc12g10330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1511
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 22/163 (13%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQQ 279
F R FRP Q +A A++A +D F+L+PTGGGKSLCYQ ++T G+
Sbjct: 643 FHLRGFRPNQLEAIDATLAGKDTFILMPTGGGKSLCYQLPSVVTGGRTTGVTIVISPLLS 702
Query: 280 TVSQAAAVLQELR-QGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFS 338
+ + L++L + +++ + ++++ S ++LY+TPE + +Q+
Sbjct: 703 LMEDQVSHLRKLNIKAFMVNGDTNPEEKSWIMSQLSNAAGEGMEVLYITPEMLSKSQALI 762
Query: 339 EVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L+ LH + +LA V+DEAHCV
Sbjct: 763 RALEKLHGRN--------------------RLARLVIDEAHCV 785
>gi|117922195|ref|YP_871387.1| ATP-dependent DNA helicase RecQ [Shewanella sp. ANA-3]
gi|117614527|gb|ABK49981.1| ATP-dependent DNA helicase RecQ [Shewanella sp. ANA-3]
Length = 607
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 77/183 (42%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FR Q + + + +DC V++PTGGGKSLCYQ
Sbjct: 20 VFGYRDFRDGQREVIERVCSGEDCLVIMPTGGGKSLCYQLPALLMPGITIVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L L+ G+ A +LNS Q Q+ VL++L +G
Sbjct: 80 DQVDSL-LQTGVNAAYLNSSQPREQSVEVLRQLHRG------------------------ 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ F E ++ L L+ F +DEA
Sbjct: 115 -ELKLLYVSPERLL-TGDFIERMRSL------------------------PLSMFAIDEA 148
Query: 379 HCV 381
HC+
Sbjct: 149 HCI 151
>gi|347800747|ref|NP_001007088.2| Bloom syndrome protein homolog [Gallus gallus]
Length = 1380
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 77/176 (43%), Gaps = 53/176 (30%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG +FR Q +A A++ +DCF+L+PTGGGKSLCYQ +PA
Sbjct: 631 FGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQ-----------LPAC------- 672
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQLIFVLTC---------ASR------KDKPSCKLLY 325
VS V+ + L++ Q L L T AS+ K P KLLY
Sbjct: 673 VSAGVTVVISPLRSLIIDQVQKLKTLDIASTYLTGDITDADASKTYMQLSKKDPIIKLLY 732
Query: 326 VTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
VTPE++ + L+ L+ + + LA FV+DEAHCV
Sbjct: 733 VTPEKVCASNRLLSALENLYNR--------------------KLLARFVIDEAHCV 768
>gi|336265633|ref|XP_003347587.1| SGS1 protein [Sordaria macrospora k-hell]
gi|380096454|emb|CCC06502.1| putative SGS1 protein [Sordaria macrospora k-hell]
Length = 2276
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 59/245 (24%)
Query: 162 SSVKHSSKSVDCKSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEF--ANVV 219
S+ H++ +S +STS+A+++ +KR+ + + E D M+F +N V
Sbjct: 1145 STATHTNNQSRSRSVMSTSTATTIKPRKRNEKANTKKAKPRQAELSMPPDKMKFPWSNDV 1204
Query: 220 I------FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPAT 273
F FR Q +A A++ +D FVL+PTGGGKSLCYQ +PA
Sbjct: 1205 RKALKDRFRMAGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQ-----------LPAV 1253
Query: 274 FLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV-------LTCASRK------DKP- 319
+ + ++ V+ L+L Q L L+ + +R+ D P
Sbjct: 1254 VKSGK---TRGITVVISPLLSLMLDQVNHLKNLMITAYAFNGDMNAETRRMVFQKLDTPH 1310
Query: 320 ---SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
+LLYVTPE + N F + L+++ +LA V+D
Sbjct: 1311 PEHELQLLYVTPEMVSKNMQFVGKMGDLYQRN--------------------KLARIVID 1350
Query: 377 EAHCV 381
EAHCV
Sbjct: 1351 EAHCV 1355
>gi|114045876|ref|YP_736426.1| ATP-dependent DNA helicase RecQ [Shewanella sp. MR-7]
gi|113887318|gb|ABI41369.1| ATP-dependent DNA helicase RecQ [Shewanella sp. MR-7]
Length = 607
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 77/183 (42%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FR Q + + + +DC V++PTGGGKSLCYQ
Sbjct: 20 VFGYRDFRDGQREVIERVCSGEDCLVIMPTGGGKSLCYQLPALLMPGITIVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L L+ G+ A +LNS Q Q+ VL++L +G
Sbjct: 80 DQVDSL-LQTGVNAAYLNSSQPREQSLEVLRQLHRG------------------------ 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ F E ++ L L+ F +DEA
Sbjct: 115 -ELKLLYVSPERLL-TADFIERMRSL------------------------PLSMFAIDEA 148
Query: 379 HCV 381
HC+
Sbjct: 149 HCI 151
>gi|308801525|ref|XP_003078076.1| DNA helicase isolog (ISS) [Ostreococcus tauri]
gi|116056527|emb|CAL52816.1| DNA helicase isolog (ISS) [Ostreococcus tauri]
Length = 1174
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 73/174 (41%), Gaps = 51/174 (29%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
F ++FR LQ A A++A +DC VL+PTGGGKSLCYQ +PA
Sbjct: 347 FNAKSFRSLQLLAVNATMAARDCLVLMPTGGGKSLCYQ-----------LPA-------V 388
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS-------------RKDKPSCKLLYVT 327
V V+ L+ Q + L ++ T S R P +LLYVT
Sbjct: 389 VKPGVTVVISPLISLIQDQLHHLSEMGIPATVLSAAKESDNSIYDDLRSSTPELRLLYVT 448
Query: 328 PERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
PE++V + L+ L+ + L FV+DEAHC+
Sbjct: 449 PEKVVRSGKLKTALQRLYERN--------------------MLNRFVLDEAHCI 482
>gi|383934161|ref|ZP_09987603.1| ATP-dependent DNA helicase RecQ [Rheinheimera nanhaiensis E407-8]
gi|383704617|dbj|GAB57694.1| ATP-dependent DNA helicase RecQ [Rheinheimera nanhaiensis E407-8]
Length = 604
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 71/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR QH +A++A QD FVL+PTGGGKSLCYQ D
Sbjct: 13 FGYSEFRSGQHAVIEAALAGQDSFVLMPTGGGKSLCYQLPALLLPQVTIVVSPLMSLMKD 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GI A F+NS + Q V LRQG
Sbjct: 73 QVDALKAN-GIAAEFVNSSLSREQVLQVFARLRQG------------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ KLLYV PER++ Q + DV V + F +DEAH
Sbjct: 107 TLKLLYVAPERLLQPQFLDRL----------------QDVGV---------SLFAIDEAH 141
Query: 380 CV 381
C+
Sbjct: 142 CI 143
>gi|255579791|ref|XP_002530733.1| DNA helicase, putative [Ricinus communis]
gi|223529697|gb|EEF31639.1| DNA helicase, putative [Ricinus communis]
Length = 718
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 76/182 (41%), Gaps = 66/182 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG+ FR Q +A ++ ++ +DCF L+PTGGGKS+CYQ +
Sbjct: 36 FGHSDFRGKQLEAIQSVLSGRDCFCLMPTGGGKSMCYQIPALSRPGIVLVVSPLIALMEN 95
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L K I A FL+S QT + ++L G KP
Sbjct: 96 QVMALKEK-EIAAEFLSSTQTSQLKTKIHEDLDSG-----------------------KP 131
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
S +LLYVTPE ++ F L +H +G + L +DEAH
Sbjct: 132 SIRLLYVTPE-LIATPGFMSKLTRIHARGLLNL--------------------IAIDEAH 170
Query: 380 CV 381
C+
Sbjct: 171 CI 172
>gi|358339333|dbj|GAA38465.2| bloom syndrome protein homolog [Clonorchis sinensis]
Length = 949
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 77/183 (42%), Gaps = 65/183 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG ++FR Q QA A++ DCFV++PTGGGKSLCYQ
Sbjct: 212 LFGLKSFRRNQLQAINAALLGLDCFVIMPTGGGKSLCYQLPAAVQDGLTLVISPLKALVL 271
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ + GI A L + T++++ V L + +
Sbjct: 272 DQVTKMQ-SLGIVAAHLTGEATMTESDRVYASLHLATLRT-------------------- 310
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYVTPE+I + L+ L+R+ + QR FV+DEA
Sbjct: 311 ---KLLYVTPEKIAASDKLKGCLEQLYRRNLL----------------QR----FVIDEA 347
Query: 379 HCV 381
HCV
Sbjct: 348 HCV 350
>gi|431796165|ref|YP_007223069.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
gi|430786930|gb|AGA77059.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
Length = 708
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 73/184 (39%), Gaps = 72/184 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+G +FR Q ++ + +QD VL+PTGGGKS+CYQ
Sbjct: 11 FYGYDSFRGQQEAIIQSILKQQDTIVLMPTGGGKSVCYQIPAMVNDGLTLVISPLIALMK 70
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ LN GIPA +LNS Q+ S+ V +E+R G
Sbjct: 71 DQVDALN-GMGIPAAYLNSSQSASEQRFVSEEIRSG------------------------ 105
Query: 319 PSCKLLYVTPERIVGNQ-SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDE 377
KLLYV PER+ G +E LK +L+ +DE
Sbjct: 106 -KLKLLYVAPERLFGGAFPLTETLKT------------------------SRLSLVAIDE 140
Query: 378 AHCV 381
AHCV
Sbjct: 141 AHCV 144
>gi|6934278|gb|AAF31695.1|AF205407_1 QDE3 protein [Neurospora crassa]
Length = 1955
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 39/224 (17%)
Query: 173 CKSGVSTSSASSVSNKKRSSLISDNE----HGTLSF--EELQAL--DDMEFANVVIFGNR 224
+S +STS+A+++ +KR+ + + H LS E+++ +D+ A F
Sbjct: 845 SQSVMSTSTATTIKPRKRNENANAKKPKSVHAKLSMPPEKMKYAWSNDVRKALKDRFRMS 904
Query: 225 AFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATFLNSQ 278
FR Q +A A++ +D FVL+PTGGGKSLCYQ ++ GI P L
Sbjct: 905 GFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVRSGKTRGITVVISPLLSLMLD 964
Query: 279 QTVSQAAAVLQELR-QGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSF 337
Q A ++Q G + S+ + +++F A + +LLYVTPE + NQ+F
Sbjct: 965 QVNHLANLMIQAYAFNGDMNSE---MRRMVFQKLDAEHPEH-ELQLLYVTPEMVSKNQTF 1020
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ L+R+ ++LA V+DEAHCV
Sbjct: 1021 VNKMMDLYRR--------------------KKLARIVIDEAHCV 1044
>gi|164423365|ref|XP_964030.2| hypothetical protein NCU08598 [Neurospora crassa OR74A]
gi|157070060|gb|EAA34794.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1955
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 39/224 (17%)
Query: 173 CKSGVSTSSASSVSNKKRSSLISDNE----HGTLSF--EELQAL--DDMEFANVVIFGNR 224
+S +STS+A+++ +KR+ + + H LS E+++ +D+ A F
Sbjct: 845 SQSVMSTSTATTIKPRKRNENANAKKAKSVHAKLSMPPEKMKYAWSNDVRKALKDRFRMS 904
Query: 225 AFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATFLNSQ 278
FR Q +A A++ +D FVL+PTGGGKSLCYQ ++ GI P L
Sbjct: 905 GFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVRSGKTRGITVVISPLLSLMLD 964
Query: 279 QTVSQAAAVLQELR-QGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSF 337
Q A ++Q G + S+ + +++F A + +LLYVTPE + NQ+F
Sbjct: 965 QVNHLANLMIQAYAFNGDMNSE---MRRMVFQKLDAEHPEH-ELQLLYVTPEMVSKNQTF 1020
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ L+R+ ++LA V+DEAHCV
Sbjct: 1021 VNKMMDLYRR--------------------KKLARIVIDEAHCV 1044
>gi|449329518|gb|AGE95789.1| ATP-dependent DNA helicase [Encephalitozoon cuniculi]
Length = 766
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 78/189 (41%), Gaps = 65/189 (34%)
Query: 214 EFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------- 257
EF +F + FR Q + +A ++ +D FVL+PTGGGKS+CY
Sbjct: 226 EFYLREVFKMKEFRTNQREVIQACLSGKDVFVLMPTGGGKSICYQLPALVYDGITIVVSP 285
Query: 258 -----QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTC 312
QDQI L L+ GI A +NS + ++ V Q L
Sbjct: 286 LLSLVQDQIRNL-LQKGILALPINSNLSRAERDLVFQVLGG------------------- 325
Query: 313 ASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAG 372
D+ CK+ YVTPE I + F +VL L C+ +L
Sbjct: 326 ----DELICKIFYVTPELIAKSGHFHDVLSGL--------------------VCRGRLKR 361
Query: 373 FVVDEAHCV 381
FV+DEAHCV
Sbjct: 362 FVIDEAHCV 370
>gi|418020168|ref|ZP_12659486.1| ATP-dependent DNA helicase, partial [Candidatus Regiella
insecticola R5.15]
gi|347604486|gb|EGY29134.1| ATP-dependent DNA helicase [Candidatus Regiella insecticola R5.15]
Length = 534
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 61/135 (45%), Gaps = 47/135 (34%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG + FRP Q + A ++ QDC V++PTGGGKSLCYQ
Sbjct: 20 VFGYQQFRPGQKEIIAAILSGQDCLVIMPTGGGKSLCYQIPALVMKGLTLVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L L +G+ A LNS QT Q + V+ + R G +
Sbjct: 80 DQVDQL-LAYGVTAACLNSSQTWQQQSEVIAKCRSGKI---------------------- 116
Query: 319 PSCKLLYVTPERIVG 333
KLLY+ PER+V
Sbjct: 117 ---KLLYIAPERLVA 128
>gi|19074536|ref|NP_586042.1| ATP-DEPENDENT DNA HELICASE [Encephalitozoon cuniculi GB-M1]
gi|19069178|emb|CAD25646.1| ATP-DEPENDENT DNA HELICASE [Encephalitozoon cuniculi GB-M1]
Length = 766
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 78/189 (41%), Gaps = 65/189 (34%)
Query: 214 EFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------- 257
EF +F + FR Q + +A ++ +D FVL+PTGGGKS+CY
Sbjct: 226 EFYLREVFKMKEFRTNQREVIQACLSGKDVFVLMPTGGGKSICYQLPALVYDGITIVVSP 285
Query: 258 -----QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTC 312
QDQI L L+ GI A +NS + ++ V Q L
Sbjct: 286 LLSLVQDQIRNL-LQKGILALPINSNLSRAERDLVFQVLGG------------------- 325
Query: 313 ASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAG 372
D+ CK+ YVTPE I + F +VL L C+ +L
Sbjct: 326 ----DELICKIFYVTPELIAKSGHFHDVLSGL--------------------VCRGRLKR 361
Query: 373 FVVDEAHCV 381
FV+DEAHCV
Sbjct: 362 FVIDEAHCV 370
>gi|401401364|ref|XP_003880993.1| hypothetical protein NCLIV_040350 [Neospora caninum Liverpool]
gi|325115405|emb|CBZ50960.1| hypothetical protein NCLIV_040350 [Neospora caninum Liverpool]
Length = 1699
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/213 (27%), Positives = 84/213 (39%), Gaps = 68/213 (31%)
Query: 190 RSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPT 249
R + S N G SFE + N +FGNR+FRP+Q A ++++D FV++PT
Sbjct: 639 RVNTASRNWEGDRSFEWDSKIHQ---CNQEVFGNRSFRPMQRAIINAVLSQRDVFVMMPT 695
Query: 250 GGGKSLCYQ---------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVL 288
GGGKSLC+Q DQ+ + L + + Q + AV
Sbjct: 696 GGGKSLCFQLPAVVSGGVTVVVMPLVSLITDQLEQMQL-LNVGCRAFAANQPWEEQKAVY 754
Query: 289 QELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKG 348
ELR+G LL VTPE++ G+ L L+R+G
Sbjct: 755 DELRRG-----------------------DGEINLLLVTPEKLKGSSLLRSCLHELNREG 791
Query: 349 SIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+L F +DEAHCV
Sbjct: 792 --------------------RLDRFAIDEAHCV 804
>gi|114564972|ref|YP_752486.1| ATP-dependent DNA helicase RecQ [Shewanella frigidimarina NCIMB
400]
gi|114336265|gb|ABI73647.1| ATP-dependent DNA helicase RecQ [Shewanella frigidimarina NCIMB
400]
Length = 615
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 79/183 (43%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG RAFR Q + + S+ QD V++PTGGGKS+CYQ
Sbjct: 29 VFGYRAFREGQREVIEQSLQGQDTLVIMPTGGGKSMCYQLPAIVLPGVTVVVSPLISLMK 88
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L L+ G+ A +LNS Q+A VL++L G +
Sbjct: 89 DQVDSL-LQSGVSAAYLNSSLPREQSAEVLRKLHSGEI---------------------- 125
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ F E L+ + DV + F VDEA
Sbjct: 126 ---KLLYVSPERLL-RPDFIERLQ-------------SVDVSM-----------FAVDEA 157
Query: 379 HCV 381
HC+
Sbjct: 158 HCI 160
>gi|449682531|ref|XP_002167927.2| PREDICTED: Bloom syndrome protein-like [Hydra magnipapillata]
Length = 649
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 78/169 (46%), Gaps = 39/169 (23%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG AFR Q A +++ K+DCFVL+PTGGGKSLCYQ +T L G+ +
Sbjct: 45 FGLHAFRQNQLDAILSALDKKDCFVLMPTGGGKSLCYQ---LTALLTPGLTVVVSPLRSL 101
Query: 281 VSQAAAVLQELRQGLVLSQHYFL-------HQLIFVLTCASRKDKPSCKLLYVTPERIVG 333
+ L+ L+ +S Y Q +++ K +PS KLLYVTPE++
Sbjct: 102 IIDQVQKLKSLK----ISAAYLSSDVTKDEEQQVYIDLA---KREPSLKLLYVTPEKLSI 154
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAG-FVVDEAHCV 381
+ + K L+ RQL FV+DEAHC+
Sbjct: 155 SYKLTSCFKGLY---------------------DRQLLDRFVIDEAHCI 182
>gi|302678065|ref|XP_003028715.1| hypothetical protein SCHCODRAFT_70092 [Schizophyllum commune H4-8]
gi|300102404|gb|EFI93812.1| hypothetical protein SCHCODRAFT_70092 [Schizophyllum commune H4-8]
Length = 788
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 42/215 (19%)
Query: 178 STSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVV------IFGNRAFRPLQH 231
ST+S +V K+R + G + ++ DD + + + +FG R FR Q
Sbjct: 44 STASKPTVKGKERQT-------GGIDYDS----DDFPWMSALRAKMKEVFGIREFRLAQK 92
Query: 232 QACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-PATFLNSQQTVSQAAAVLQ 289
+A AS+ +D +++PTGGGKSL YQ ++T I P L S Q + A ++
Sbjct: 93 KAINASMDGRDIVLVMPTGGGKSLTYQLPALMTPGCTLVISPLVALISDQILHLEEAGVR 152
Query: 290 ELRQGLVLSQHY---FLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHR 346
++ + QL + + + P KL YVTPERI +++F +L+ L
Sbjct: 153 AVKITAATPKEQSREITQQLTAMANRSLPRGTPEIKLCYVTPERIAKSKTFLSLLQRLA- 211
Query: 347 KGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
KG++ LA V+DEAHCV
Sbjct: 212 KGAM-------------------LARIVIDEAHCV 227
>gi|167386794|ref|XP_001737905.1| ATP-dependent helicase SGS1 [Entamoeba dispar SAW760]
gi|165899114|gb|EDR25795.1| ATP-dependent helicase SGS1, putative [Entamoeba dispar SAW760]
Length = 1162
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 52/207 (25%)
Query: 188 KKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLL 247
KK +S+ SD E S++E +++ N +FGN +FRP Q +++ + VL+
Sbjct: 413 KKFASIDSDWEKQEFSWKE-----NIKKCNNAVFGNDSFRPSQEAIINCVMSRNNALVLM 467
Query: 248 PTGGGKSLCYQDQIITLNLKFGIPATFLNS-QQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
PTGGGKSLCYQ +P+ F+ VS +++Q+ LV + + +
Sbjct: 468 PTGGGKSLCYQ-----------LPSYFIKGITVVVSPLVSLIQDQVSNLVETG---MEAI 513
Query: 307 IFVLTCAS------------RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKV 354
F +S ++ K + K ++VTPERI ++SF E L + + +
Sbjct: 514 AFYSGSSSEEAKQFYKESYQKEGKCTIKFVFVTPERITQSKSFKEALNRYYENNNFGM-- 571
Query: 355 LTTDVVVLPHTCQRQLAGFVVDEAHCV 381
V+DEAHC+
Sbjct: 572 ------------------VVIDEAHCI 580
>gi|386826289|ref|ZP_10113396.1| ATP-dependent DNA helicase RecQ [Beggiatoa alba B18LD]
gi|386427173|gb|EIJ41001.1| ATP-dependent DNA helicase RecQ [Beggiatoa alba B18LD]
Length = 733
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 71/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q + +A D VL+PTGGGKSLCY Q
Sbjct: 13 VFGYEHFRGHQETIIQHVMAGGDALVLMPTGGGKSLCYQIPALLRSGVGVVISPLIALMQ 72
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L L+ GI A FLNS Q +Q ++Q+LRQ
Sbjct: 73 DQVDAL-LQLGIRAAFLNSSQDSAQTRQIVQQLRQN------------------------ 107
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+ LLYV PER+ N F E L L LA F +DEA
Sbjct: 108 -ALDLLYVAPERL-NNPRFLEFLDSL------------------------PLALFAIDEA 141
Query: 379 HCV 381
HCV
Sbjct: 142 HCV 144
>gi|377555791|ref|ZP_09785519.1| ATP-dependent DNA helicase RecQ [endosymbiont of Bathymodiolus sp.]
Length = 732
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 79/183 (43%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG +FRPLQ QA +A +D ++LPTGGGKSLCY Q
Sbjct: 11 VFGFDSFRPLQEQAVDKILAGEDVLLILPTGGGKSLCYQLPALLMEGVLVVISPLLALMQ 70
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQI+ L K G+ A L+S QT ++E+R T A+ K++
Sbjct: 71 DQILGLENK-GVKAAMLSSMQT-------MEEIRA-----------------TEAALKNQ 105
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
K+L+V PER+ N F LK + ++A F VDEA
Sbjct: 106 -DIKVLFVAPERL-QNAYFLSFLKSI------------------------KIAFFAVDEA 139
Query: 379 HCV 381
HCV
Sbjct: 140 HCV 142
>gi|409046313|gb|EKM55793.1| hypothetical protein PHACADRAFT_95968 [Phanerochaete carnosa
HHB-10118-sp]
Length = 620
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 47/238 (19%)
Query: 152 PDGRSQIFTPSSVKHSSKSVDCKSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALD 211
P G +F P S + +V TS ++ V +R S + + L +
Sbjct: 44 PPGPDAVFPPRSTQLQVTTV-------TSHSAHVLPDRRPSPLPN-----LDLTKTPFYS 91
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKF-GI 270
D+ + FG R FRP Q +AC AS+ D FVL+PTGGGKSLC+Q + N + G+
Sbjct: 92 DLLWTLRNAFGLRTFRPNQLEACTASMQGHDVFVLMPTGGGKSLCFQLPAVVKNAQMDGV 151
Query: 271 P------ATFLNSQQTVSQAAAVLQELRQGLVLSQHY-FLHQLIFVLTCASRKDKPSCKL 323
+ ++ Q + +A V G S+ +HQ++ + + +P+ +
Sbjct: 152 TVVISPLVSLMHDQVSALRAKGVKVACFVGDQTSEEANNVHQML-----KTPRHRPA--I 204
Query: 324 LYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
LY TPE++ ++ L+ L+ G L V DEAHC+
Sbjct: 205 LYATPEKLDKSERLKNDLQALYEAG--------------------LLVRIVADEAHCI 242
>gi|302509478|ref|XP_003016699.1| RecQ family helicase MusN [Arthroderma benhamiae CBS 112371]
gi|291180269|gb|EFE36054.1| RecQ family helicase MusN [Arthroderma benhamiae CBS 112371]
Length = 1441
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 126/290 (43%), Gaps = 32/290 (11%)
Query: 101 DNSREYIDILDDSPEPKRRPT-----LMELDSLSDTEDLDFTIPKQKDAILNLSSCPDGR 155
D++ +++D+LDD P P R L + D++ D + D + + P+ +
Sbjct: 549 DDAEDFVDMLDDDP-PYSRTMDAPCGLATTATAGDSDFDDRSASNPYDELEDFFDSPNSK 607
Query: 156 SQIFTPSSVKHSSKSVDCKSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALD-DME 214
+ P+ + S+ + + V ++ + S +S + G +S E D++
Sbjct: 608 PALSAPAPPESHSQFPNRE--VFRETSGNQSKPPSVKHLSQKDVGQISSVEGHPWSKDVK 665
Query: 215 FANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPAT 273
A F R FRP Q +A ++++ +D FVL+PTGGGKSLCYQ II G+
Sbjct: 666 SAMRETFKLRGFRPNQLEAINSTLSGKDTFVLMPTGGGKSLCYQLPSIIRTGKTKGVTIV 725
Query: 274 FLNSQQTVSQAAAVLQELR-QGLVLSQHYFLHQLIFVL-TCASRKDKPSCKLLYVTPERI 331
+ A LQ+L + +++ + ++ S + +LLYVTPE +
Sbjct: 726 ISPLLSLMQDQVAHLQKLNVKAFLINGDVSKDERATIMNNLRSLRADSLIQLLYVTPEML 785
Query: 332 VGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+++ VL LH +LA V+DEAHCV
Sbjct: 786 AKSRAMESVLLQLH--------------------SNDKLARIVIDEAHCV 815
>gi|94970568|ref|YP_592616.1| ATP-dependent DNA helicase RecQ [Candidatus Koribacter versatilis
Ellin345]
gi|94552618|gb|ABF42542.1| ATP-dependent DNA helicase, RecQ family [Candidatus Koribacter
versatilis Ellin345]
Length = 644
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRPLQ + ++ VA +D V++PTGGGKSLCYQ D
Sbjct: 17 FGYDRFRPLQERIIRSIVANKDVCVIMPTGGGKSLCYQLPAAISQKTTVVISPLIALMND 76
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L + GIPA LNS + V++ R+G
Sbjct: 77 QVVQLT-QMGIPAALLNSSLPYDEQKKVMRAAREG------------------------- 110
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLY++PER+V + G +R +P L F +DEAH
Sbjct: 111 KYRLLYLSPERLVREDTV----------GWLR---------TVP------LGVFAIDEAH 145
Query: 380 CV 381
C+
Sbjct: 146 CI 147
>gi|304414091|ref|ZP_07395459.1| ATP-dependent DNA helicase [Candidatus Regiella insecticola LSR1]
gi|304283305|gb|EFL91701.1| ATP-dependent DNA helicase [Candidatus Regiella insecticola LSR1]
Length = 629
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 60/135 (44%), Gaps = 47/135 (34%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG + FRP Q + A ++ QDC V++PTGGGKSLCYQ
Sbjct: 25 VFGYQQFRPGQKEIIAAILSGQDCLVIMPTGGGKSLCYQIPALVMKGLTLVVSPLISLMK 84
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L L +G+ A LNS QT Q + V+ R G +
Sbjct: 85 DQVDQL-LAYGVTAACLNSSQTWQQQSEVIANCRSGKI---------------------- 121
Query: 319 PSCKLLYVTPERIVG 333
KLLY+ PER+V
Sbjct: 122 ---KLLYIAPERLVA 133
>gi|449304030|gb|EMD00038.1| hypothetical protein BAUCODRAFT_63664, partial [Baudoinia
compniacensis UAMH 10762]
Length = 533
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 67/186 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------- 258
F + FR Q QA A++A +D F+L+PTGGGKSLCYQ
Sbjct: 29 FRLKGFRENQLQAINATLAGKDTFILMPTGGGKSLCYQLPSLITTGKTKGVTVVVSPLLS 88
Query: 259 ---DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
DQ+ L L+ GI A +N + T + + + L Q R
Sbjct: 89 LMEDQVQHL-LELGIQAFLVNGESTAGEKNQIREALGQ---------------------R 126
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
+ + LYVTPE + N+S + + L+++ RQLA V+
Sbjct: 127 DAQEFIQCLYVTPEMLSKNESMLSIFERLYQR--------------------RQLARIVI 166
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 167 DEAHCV 172
>gi|189527306|ref|XP_701357.3| PREDICTED: Bloom syndrome protein homolog, partial [Danio rerio]
Length = 1261
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 76/182 (41%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q +A AS+ +D FVL+PTGGGKSLCYQ D
Sbjct: 674 FGLHQFRFNQLEAINASLLGEDTFVLMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIVD 733
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L I AT L+ + S+AA + +L SRKD P
Sbjct: 734 QVQKLTT-LDICATSLSGDKKDSEAARIYMQL----------------------SRKD-P 769
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ KLLY TPE++ + L+ L+ +G LA V+DEAH
Sbjct: 770 AIKLLYATPEKVCASGRMISALQNLYERG--------------------LLARLVIDEAH 809
Query: 380 CV 381
CV
Sbjct: 810 CV 811
>gi|449457093|ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus]
gi|449511185|ref|XP_004163888.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus]
Length = 1269
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 65/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------- 257
++E N +FGN +FRP Q + A+++ D FVL+PTGGGKSL Y
Sbjct: 504 ELEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALICPGVTLVI 563
Query: 258 -------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
QDQI+ L ++ I A +L++ S+ + ++L
Sbjct: 564 SPLVSLIQDQIMHL-IQANISAAYLSANMEWSEQQEIFRDLSS----------------- 605
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
D KLLYVTPE++ + L+ L+ + L
Sbjct: 606 ------DCSKYKLLYVTPEKVAKSDVLLRHLESLN--------------------ARHLL 639
Query: 371 AGFVVDEAHCV 381
A V+DEAHCV
Sbjct: 640 ARIVIDEAHCV 650
>gi|392373492|ref|YP_003205325.1| ATP-dependent DNA helicase RecQ [Candidatus Methylomirabilis
oxyfera]
gi|258591185|emb|CBE67480.1| ATP-dependent DNA helicase RecQ [Candidatus Methylomirabilis
oxyfera]
Length = 622
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 76/183 (41%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
++G A PLQ +A A +A++D V+LPTGGGKSLCYQ
Sbjct: 11 VWGYDALLPLQEEAIGAVLARRDSIVILPTGGGKSLCYQAPAAAMGKLAVVVSPLIALMK 70
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+PA FLNS T ++ + L +G V + Y
Sbjct: 71 DQVDGLTTA-GVPAAFLNSSLTPNE-----RRLVEGNVANGRY----------------- 107
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER+V F L+ L + G +A F +DEA
Sbjct: 108 ---HLLYVAPERLV----FPPCLRLLKQAG---------------------VAFFAIDEA 139
Query: 379 HCV 381
HC+
Sbjct: 140 HCI 142
>gi|240960494|ref|XP_002400557.1| DNA helicase, putative [Ixodes scapularis]
gi|215490700|gb|EEC00343.1| DNA helicase, putative [Ixodes scapularis]
Length = 981
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 84/179 (46%), Gaps = 52/179 (29%)
Query: 219 VIFGNRAFRP-LQHQACKASVAK--QDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI---P 271
+FG+ AFR LQ +A +A VA+ QD FV +PTG GKSLCYQ ++T + + P
Sbjct: 16 TVFGHTAFRSGLQEKAVEA-VAQCAQDVFVSMPTGAGKSLCYQLPAVVTPDSSVTVVVSP 74
Query: 272 ATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK---------PSCK 322
L S Q LQ+LR + + + I S +D+ P +
Sbjct: 75 LIALMSDQ--------LQKLRDLGIDA------ETINSTMKKSERDRVRSDLLSMSPETR 120
Query: 323 LLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
LLYVTPE+ V + F +LK LHR G +LA F +DEAHCV
Sbjct: 121 LLYVTPEQ-VATEGFQGILKALHRIG--------------------KLARFAIDEAHCV 158
>gi|406901172|gb|EKD43910.1| ATP-dependent DNA helicase RecQ, partial [uncultured bacterium]
Length = 308
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 76/183 (41%), Gaps = 72/183 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FR Q + + + K+D FVL+PTGGGKSLCYQ D
Sbjct: 12 FGYESFRFNQEEIIQTIMQKRDAFVLMPTGGGKSLCYQIPALLFDGLTIVISPLIALMKD 71
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L GI A ++NS + + + ++L +G
Sbjct: 72 QVDALRLN-GISAAYMNSSLDSDEISDIYEQLNKG------------------------- 105
Query: 320 SCKLLYVTPERIVG-NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++G NQ F L+ L +++ F +DEA
Sbjct: 106 KIKLLYVSPERLLGNNQQFLVFLRGL------------------------KISLFAIDEA 141
Query: 379 HCV 381
HC+
Sbjct: 142 HCI 144
>gi|387015566|gb|AFJ49902.1| ATP-dependent DNA helicase Q1 [Crotalus adamanteus]
Length = 652
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 77/181 (42%), Gaps = 65/181 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRPLQ + A++A +D F+++PTGGGKSLCYQ D
Sbjct: 87 FGLQNFRPLQLETINATMAGRDVFLVMPTGGGKSLCYQLPAEGSPGFTLVICPLISLMED 146
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L + G+ AT LN+ + V E+ LS++ L
Sbjct: 147 QLMMLE-QLGVSATLLNASSSKEHVKWVHAEM-----LSRNSQL---------------- 184
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE+I ++ F L+ ++ G QL VDE H
Sbjct: 185 --KLLYVTPEKIAKSKMFMSKLEKAYQTG--------------------QLTRIAVDEVH 222
Query: 380 C 380
C
Sbjct: 223 C 223
>gi|398390493|ref|XP_003848707.1| ATP-dependent DNA helicase RecQ [Zymoseptoria tritici IPO323]
gi|339468582|gb|EGP83683.1| ATP-dependent DNA helicase RecQ [Zymoseptoria tritici IPO323]
Length = 1455
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 75/186 (40%), Gaps = 67/186 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------- 258
F + FR Q A A++A +D FVL+PTGGGKSLCYQ
Sbjct: 590 FRLKGFRENQIDAINATLAGKDTFVLMPTGGGKSLCYQLPALVRSGRTRGVTVVISPLVS 649
Query: 259 ---DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
DQ+ L K I A +NS+ T Q +A++ L V + +H
Sbjct: 650 LMEDQVQHLQ-KLNIQAFLVNSETTQDQRSALMDSLYSADVEN---LVH----------- 694
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
LLYVTPE + + + LHRK +LA FV+
Sbjct: 695 -------LLYVTPEMLAKSTKMVSTFQWLHRKN--------------------RLARFVI 727
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 728 DEAHCV 733
>gi|296813367|ref|XP_002847021.1| RecQ family helicase MusN [Arthroderma otae CBS 113480]
gi|238842277|gb|EEQ31939.1| RecQ family helicase MusN [Arthroderma otae CBS 113480]
Length = 1550
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 23/173 (13%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI 270
D++ A IF R FRP Q ++ ++++ +D FVL+PTGGGKSLCYQ II G+
Sbjct: 688 DVKSAMREIFHLRGFRPNQLESINSTLSGRDTFVLMPTGGGKSLCYQLPSIIKTGQTKGV 747
Query: 271 PATFLNSQQTVSQAAAVLQELR-QGLVLSQHYFLHQLIFVLT-CASRKDKPSCKLLYVTP 328
+ A LQ+L + +++ + +++ S + +LLYVTP
Sbjct: 748 TIVISPLLSLMQDQVAHLQKLHVKAFLINGDVSKDERTSIMSNLRSLRADSHIQLLYVTP 807
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E + +++ L LH ++LA V+DEAHCV
Sbjct: 808 EMLAKSRAMESALLQLH--------------------SNKKLARIVIDEAHCV 840
>gi|358367182|dbj|GAA83801.1| RecQ family helicase MusN [Aspergillus kawachii IFO 4308]
Length = 1549
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 23/164 (14%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQQ 279
F R FR Q +A A+++ +D FVL+PTGGGKSLCYQ ++T G+
Sbjct: 711 FHLRGFRLNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSVVTSGSTRGVTIVISPLLS 770
Query: 280 TVSQAAAVLQELR-QGLVLSQHYFLHQLIFVL-TCASRKDKPSCKLLYVTPERIVGNQSF 337
+ + L +L + +L+ Q ++L T + + +LLY+TPE + +Q+
Sbjct: 771 LMQDQVSHLNKLNIKAYLLNGETPKEQRQWILSTLSGFSAEEDIELLYITPEMVNKSQAI 830
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
++ L L+ C R+LA V+DEAHCV
Sbjct: 831 TKSLDKLN--------------------CSRKLARIVIDEAHCV 854
>gi|449704341|gb|EMD44603.1| ATP-dependent helicase SGS1, putative [Entamoeba histolytica KU27]
Length = 1170
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 52/207 (25%)
Query: 188 KKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLL 247
KK +S+ SD E S++E +++ N +FGN +FRP Q +++ + VL+
Sbjct: 418 KKFASIDSDWEKQEFSWKE-----NIKKCNNTVFGNDSFRPSQEAIINCVMSRNNALVLM 472
Query: 248 PTGGGKSLCYQDQIITLNLKFGIPATFLNS-QQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
PTGGGKSLCYQ +P+ F+ VS +++Q+ LV + + +
Sbjct: 473 PTGGGKSLCYQ-----------LPSYFIKGITLVVSPLVSLIQDQVSNLVETG---MEAI 518
Query: 307 IFVLTCAS------------RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKV 354
F +S ++ K + K ++VTPERI ++SF E L + + +
Sbjct: 519 AFYSGSSSEDAKQFYKESYQKEGKCTIKFVFVTPERITQSKSFKEALNRYYENNNFGM-- 576
Query: 355 LTTDVVVLPHTCQRQLAGFVVDEAHCV 381
V+DEAHC+
Sbjct: 577 ------------------VVIDEAHCI 585
>gi|407042405|gb|EKE41307.1| recQ family helicase, putative [Entamoeba nuttalli P19]
Length = 1173
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 52/207 (25%)
Query: 188 KKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLL 247
KK +S+ SD E S++E +++ N +FGN +FRP Q +++ + VL+
Sbjct: 421 KKFASIDSDWEKQEFSWKE-----NIKKCNNTVFGNDSFRPSQEAIINCVMSRNNALVLM 475
Query: 248 PTGGGKSLCYQDQIITLNLKFGIPATFLNS-QQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
PTGGGKSLCYQ +P+ F+ VS +++Q+ LV + + +
Sbjct: 476 PTGGGKSLCYQ-----------LPSYFIKGITLVVSPLVSLIQDQVSNLVETG---MEAI 521
Query: 307 IFVLTCAS------------RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKV 354
F +S ++ K + K ++VTPERI ++SF E L + + +
Sbjct: 522 AFYSGSSSEEAKQFYKESYQKEGKCTIKFVFVTPERITQSKSFKEALNRYYENNNFGM-- 579
Query: 355 LTTDVVVLPHTCQRQLAGFVVDEAHCV 381
V+DEAHC+
Sbjct: 580 ------------------VVIDEAHCI 588
>gi|115399192|ref|XP_001215185.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192068|gb|EAU33768.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1367
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQQ 279
F R FR Q +A A+++ +D F+L+PTGGGKSLCYQ ++T G+ T +
Sbjct: 698 FHLRGFRMNQLEAIDATLSGKDAFILMPTGGGKSLCYQLPSVVTSGATRGV--TIV---- 751
Query: 280 TVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSC--------------KLLY 325
VS +++Q+ +SQ LH ++L + K++ +LLY
Sbjct: 752 -VSPLLSLMQDQ-----VSQLRKLHIKAYLLNGETPKEERQWIMRTLSGYGAEDEIELLY 805
Query: 326 VTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+TPE + NQ+ L+ L+RK +LA V+DEAHCV
Sbjct: 806 ITPEMLTKNQTLVNSLEKLNRKS--------------------RLARIVIDEAHCV 841
>gi|67469885|ref|XP_650914.1| recQ family helicase [Entamoeba histolytica HM-1:IMSS]
gi|56467579|gb|EAL45525.1| recQ family helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 1182
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 52/207 (25%)
Query: 188 KKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLL 247
KK +S+ SD E S++E +++ N +FGN +FRP Q +++ + VL+
Sbjct: 430 KKFASIDSDWEKQEFSWKE-----NIKKCNNTVFGNDSFRPSQEAIINCVMSRNNALVLM 484
Query: 248 PTGGGKSLCYQDQIITLNLKFGIPATFLNS-QQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
PTGGGKSLCYQ +P+ F+ VS +++Q+ LV + + +
Sbjct: 485 PTGGGKSLCYQ-----------LPSYFIKGITLVVSPLVSLIQDQVSNLVETG---MEAI 530
Query: 307 IFVLTCAS------------RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKV 354
F +S ++ K + K ++VTPERI ++SF E L + + +
Sbjct: 531 AFYSGSSSEDAKQFYKESYQKEGKCTIKFVFVTPERITQSKSFKEALNRYYENNNFGM-- 588
Query: 355 LTTDVVVLPHTCQRQLAGFVVDEAHCV 381
V+DEAHC+
Sbjct: 589 ------------------VVIDEAHCI 597
>gi|440494379|gb|ELQ76762.1| ATP-dependent DNA helicase [Trachipleistophora hominis]
Length = 838
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 64/183 (34%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
IF R+FRP Q + A + ++D FVL+PTGGGKSLCY +
Sbjct: 337 IFKLRSFRPNQEEIINAVLDEKDVFVLMPTGGGKSLCYFLPAVLTHNLTVVISPLLSLIE 396
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQI L L+ I + LNS + + V + LR+G+ + H+ I
Sbjct: 397 DQIQEL-LRLNIASLTLNSAMSARERGVVFRALREGVRVGT---AHKRI----------- 441
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
K+L++TPE ++ + + +LK LA V+DEA
Sbjct: 442 ---KILFLTPETLMQSDALQRMLKG-------------------------NLARVVIDEA 473
Query: 379 HCV 381
HCV
Sbjct: 474 HCV 476
>gi|380491813|emb|CCF35054.1| RecQ family ATP-dependent DNA helicase [Colletotrichum
higginsianum]
Length = 1601
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 77/168 (45%), Gaps = 31/168 (18%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATF 274
F R FR Q +A A++A +D FVL+PTGGGKSLCYQ II+ GI P
Sbjct: 704 FRMRGFRSNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAIISSGKTRGITIVVSPLLS 763
Query: 275 LNSQQTVSQAAAVLQELR-QGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVG 333
L Q +A +Q + G +Q IF + R + +LLYVTPE +
Sbjct: 764 LMQDQVDHMSALNIQAVSLNGETNAQK---RNQIFS-SFKERSPELYIQLLYVTPEMLNN 819
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+Q+F L L+ ++LA V+DEAHCV
Sbjct: 820 SQNFMRALTNLY--------------------VNKRLARIVIDEAHCV 847
>gi|297622522|ref|YP_003703956.1| ATP-dependent DNA helicase RecQ [Truepera radiovictrix DSM 17093]
gi|297163702|gb|ADI13413.1| ATP-dependent DNA helicase RecQ [Truepera radiovictrix DSM 17093]
Length = 598
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 72/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG AFR LQ Q + D VL+PTGGGKSLCYQ
Sbjct: 12 VFGYPAFRGLQAQVIERVARGGDALVLMPTGGGKSLCYQIPALLRPGVGVVVSPLIALMK 71
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L L+ G+ A +LNS + +AAAV + L G
Sbjct: 72 DQVDAL-LQLGVRAAYLNSSLSSQEAAAVERALLAG------------------------ 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PER++ + S + + QLA F VDEA
Sbjct: 107 -ELKLLYVAPERLLTPRFLSLLARA-------------------------QLALFAVDEA 140
Query: 379 HCV 381
HCV
Sbjct: 141 HCV 143
>gi|307103815|gb|EFN52072.1| hypothetical protein CHLNCDRAFT_36987 [Chlorella variabilis]
Length = 589
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 77/192 (40%), Gaps = 65/192 (33%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------- 257
D++ N FGNR FR Q ++++ +D FVL+PTGGGKSLCY
Sbjct: 30 DELRVRNREAFGNRDFRHNQLGIMNSTLSNKDVFVLMPTGGGKSLCYQLPALLSKGVTIV 89
Query: 258 --------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
QDQ+ L + GIPA F+ Q A R S V
Sbjct: 90 VSPLVSLIQDQVHHLTV-LGIPAAFVGGSMDWKQQA------RPADFFSA---------V 133
Query: 310 LTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
L C ++L++TPE++ + L LHR+G
Sbjct: 134 LRC--------WQVLFITPEKLSASGKLQSTLDSLHRRG--------------------L 165
Query: 370 LAGFVVDEAHCV 381
LA V+DEAHCV
Sbjct: 166 LARVVIDEAHCV 177
>gi|146322807|ref|XP_749627.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
gi|129556812|gb|EAL87589.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
Length = 1563
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 23/164 (14%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQQ 279
F R FR Q +A A+++ +D FVL+PTGGGKSLCYQ I+T G+
Sbjct: 728 FHLRGFRMNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSIVTSGSTRGVTIVVSPLLS 787
Query: 280 TVSQAAAVLQELR-QGLVLSQHYFLHQLIFVL-TCASRKDKPSCKLLYVTPERIVGNQSF 337
+ + L+ L+ + +L+ + +++ T + + +LLY+TPE + +Q+
Sbjct: 788 LMQDQVSHLKRLKIKAFLLNGETKQEERQWIMQTLSGPAAEEQIELLYITPEMVNKSQAL 847
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L+ L+R+ R+LA V+DEAHCV
Sbjct: 848 IRSLEKLNRR--------------------RRLARIVIDEAHCV 871
>gi|119480183|ref|XP_001260120.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
gi|119408274|gb|EAW18223.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
Length = 1564
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 23/164 (14%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQQ 279
F R FR Q +A A+++ +D FVL+PTGGGKSLCYQ I+T G+
Sbjct: 730 FHLRGFRMNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSIVTSGSTRGVTIVVSPLLS 789
Query: 280 TVSQAAAVLQELR-QGLVLSQHYFLHQLIFVL-TCASRKDKPSCKLLYVTPERIVGNQSF 337
+ + L+ L+ + +L+ + +++ T + + +LLY+TPE + +Q+
Sbjct: 790 LMQDQVSHLKRLKIKAFLLNGETKQEERQWIMQTLSGPAAEEQIELLYITPEMVNKSQAL 849
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L+ L+R+ R+LA V+DEAHCV
Sbjct: 850 IRSLEKLNRR--------------------RRLARIVIDEAHCV 873
>gi|322421607|ref|YP_004200830.1| ATP-dependent DNA helicase RecQ [Geobacter sp. M18]
gi|320127994|gb|ADW15554.1| ATP-dependent DNA helicase RecQ [Geobacter sp. M18]
Length = 598
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 74/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
IFG +AFRP Q + + +A +D FVL+PTGGGKSLCYQ
Sbjct: 12 IFGYKAFRPRQQEIVETVLAGKDAFVLMPTGGGKSLCYQVPALCLPGTALVVSPLISLMK 71
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A NS ++A VL EL G
Sbjct: 72 DQVDALR-ENGVAAACYNSALGEAEARRVLAELHAG------------------------ 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PER++ + F E R+K L + F +DEA
Sbjct: 107 -ELKLLYVAPERLLSD-GFLE-----------RIKTLPISL-------------FAIDEA 140
Query: 379 HCV 381
HCV
Sbjct: 141 HCV 143
>gi|167622376|ref|YP_001672670.1| ATP-dependent DNA helicase RecQ [Shewanella halifaxensis HAW-EB4]
gi|167352398|gb|ABZ75011.1| ATP-dependent DNA helicase RecQ [Shewanella halifaxensis HAW-EB4]
Length = 607
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 76/183 (41%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FR Q + + A QDC V++PTGGGKSLCYQ
Sbjct: 20 VFGYRTFREGQREVIEQICAGQDCLVIMPTGGGKSLCYQLPALIMPGLTVVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L ++ G+ A +LNS ++ VLQ++R G
Sbjct: 80 DQVDSL-IQTGVSAAYLNSSLPREESLQVLQKMRYG------------------------ 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ SF + RL L + F +DEA
Sbjct: 115 -ELKLLYVSPERLL-QASFID-----------RLHELNVSL-------------FAIDEA 148
Query: 379 HCV 381
HC+
Sbjct: 149 HCI 151
>gi|221482271|gb|EEE20626.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii GT1]
Length = 1625
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 39/173 (22%)
Query: 217 NVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITL-NLKFGI-PATF 274
N +FG FR LQ A A ++ +DCF+++PTGGGKSLCYQ L L I P
Sbjct: 635 NKEVFGYTDFRGLQLGAINAVMSGRDCFLVMPTGGGKSLCYQLPAYALGGLTLVISPLLA 694
Query: 275 LNSQQTVS------QAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTP 328
L Q S +AA + E+ + +L+ + L Q F L ++L TP
Sbjct: 695 LMGDQLRSLKNLGVEAAKIDGEISKSDLLALYDELSQPSFSL-----------RVLMATP 743
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E + +++ + VL+ +H +G + L VVDEAHCV
Sbjct: 744 EFLARSEALTTVLRSVHARGLLSL--------------------LVVDEAHCV 776
>gi|157963641|ref|YP_001503675.1| ATP-dependent DNA helicase RecQ [Shewanella pealeana ATCC 700345]
gi|157848641|gb|ABV89140.1| ATP-dependent DNA helicase RecQ [Shewanella pealeana ATCC 700345]
Length = 607
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 76/183 (41%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FR Q + + A QDC V++PTGGGKSLCYQ
Sbjct: 20 VFGYRTFREGQREVIEQICAGQDCLVIMPTGGGKSLCYQLPALVLPGLTVVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L ++ G+ A +LNS ++ VLQ++R G
Sbjct: 80 DQVDSL-IQTGVSAAYLNSSLPREESLQVLQKMRYG------------------------ 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ SF + RL L + F +DEA
Sbjct: 115 -ELKLLYVSPERLL-QASFID-----------RLHELNVSL-------------FAIDEA 148
Query: 379 HCV 381
HC+
Sbjct: 149 HCI 151
>gi|159129033|gb|EDP54147.1| RecQ family helicase MusN [Aspergillus fumigatus A1163]
Length = 1563
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 23/164 (14%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQQ 279
F R FR Q +A A+++ +D FVL+PTGGGKSLCYQ I+T G+
Sbjct: 728 FHLRGFRMNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSIVTSGSTRGVTIVVSPLLS 787
Query: 280 TVSQAAAVLQELR-QGLVLSQHYFLHQLIFVL-TCASRKDKPSCKLLYVTPERIVGNQSF 337
+ + L+ L+ + +L+ + +++ T + + +LLY+TPE + +Q+
Sbjct: 788 LMQDQVSHLKRLKIKAFLLNGETKQEERQWIMQTLSGPAAEEQIELLYITPEMVNKSQAL 847
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L+ L+R+ R+LA V+DEAHCV
Sbjct: 848 IRSLEKLNRR--------------------RRLARIVIDEAHCV 871
>gi|440795009|gb|ELR16150.1| hypothetical protein ACA1_177590 [Acanthamoeba castellanii str.
Neff]
Length = 293
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 216 ANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ 258
AN +FGNR FRP Q + A++A +DCFVL+PTGGGKSLCYQ
Sbjct: 223 ANRNLFGNRTFRPNQREIINATMAGRDCFVLMPTGGGKSLCYQ 265
>gi|400595361|gb|EJP63166.1| RecQ family ATP-dependent DNA helicase [Beauveria bassiana ARSEF
2860]
Length = 1678
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATF 274
F + FR Q +A A+++ QD FVL+PTGGGKSLCYQ ++ G+ P
Sbjct: 802 FRMKGFRQNQLEAINATLSGQDAFVLMPTGGGKSLCYQLPAVVRTGKTRGVTIVVSPLLS 861
Query: 275 LNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGN 334
L Q A +Q + S Y + + T R + +LLY+TPE I N
Sbjct: 862 LMQDQVDHMKALGIQAVAFNGECSTEY---KRQVMSTFGERSPEHFIELLYITPEMISKN 918
Query: 335 QSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+F+ L+ L++ G + A V+DEAHCV
Sbjct: 919 MAFNNALQRLYQNG--------------------KFARLVIDEAHCV 945
>gi|342865477|gb|EGU71809.1| hypothetical protein FOXB_17682 [Fusarium oxysporum Fo5176]
Length = 482
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATF 274
F + FR Q +A A++ +D FVL+PTGGGKSLCYQ +I GI P
Sbjct: 303 FRMKRFRHNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVIRTGKTQGITIVVSPLLS 362
Query: 275 LNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGN 334
L Q A +Q + S Y Q++ S +D +LLYVTPE + N
Sbjct: 363 LMQDQVDHMKALGIQAVAFNGEYSAEY-KRQVMTAFEKRSPED--YIELLYVTPEMVSKN 419
Query: 335 QSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+F+ ++ L+ KG + A V+DEAHCV
Sbjct: 420 TTFNNGMRTLYDKG--------------------KFARIVIDEAHCV 446
>gi|390357198|ref|XP_781064.3| PREDICTED: uncharacterized protein LOC575579 [Strongylocentrotus
purpuratus]
Length = 1391
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 48/219 (21%)
Query: 174 KSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQA 233
++ + +S+ S ++ ++SDN +F + L + F FG FR Q +A
Sbjct: 733 QTAIPSSNMSEDMSEMPPEVVSDNPFSGYNFPHSRELHKV-FRKT--FGLHQFRENQLEA 789
Query: 234 CKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQTV-SQAAAVLQELR 292
A++ +DCF+L+PTGGGKSL YQ +P V S +++Q+
Sbjct: 790 INAALLGEDCFILMPTGGGKSLTYQ-----------LPGVLTKGVTIVISPLKSLIQDQV 838
Query: 293 QGLV---LSQHYFLHQL-------IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLK 342
Q LV + + + ++ I+ C P K+LYVTPE+I +Q ++
Sbjct: 839 QRLVSLEIQETHLSGEMAGAAADGIYRQLCMR---DPVVKMLYVTPEKISASQKLLSTME 895
Query: 343 CLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L+ +G L+ FV+DEAHCV
Sbjct: 896 HLYTRG--------------------LLSRFVIDEAHCV 914
>gi|391232165|ref|ZP_10268371.1| ATP-dependent DNA helicase RecQ [Opitutaceae bacterium TAV1]
gi|391221826|gb|EIQ00247.1| ATP-dependent DNA helicase RecQ [Opitutaceae bacterium TAV1]
Length = 620
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 75/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRPLQ + +AS+A +D F LLPTGGGKS+C+Q D
Sbjct: 12 FGYSGFRPLQREIIEASLAGRDVFALLPTGGGKSMCFQLPALHRTGLTVVVSPLIALMKD 71
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L G+ AT+LNS T +A + L L +G
Sbjct: 72 QVDQLQAA-GVAATYLNSSLTSGEARSRLAGLHRG------------------------- 105
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLYV PER++ + ++ E L+ + +A +DEAH
Sbjct: 106 EWRLLYVAPERLMLD-NWQENLRAWN------------------------VAALAIDEAH 140
Query: 380 CV 381
C+
Sbjct: 141 CI 142
>gi|422021069|ref|ZP_16367583.1| ATP-dependent DNA helicase RecQ [Providencia sneebia DSM 19967]
gi|414099974|gb|EKT61607.1| ATP-dependent DNA helicase RecQ [Providencia sneebia DSM 19967]
Length = 608
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG ++FRP Q +A + +DC VL+PTGGGKSLCYQ D
Sbjct: 21 FGYQSFRPGQEAVIRAILDNRDCLVLMPTGGGKSLCYQVPALVKDGITLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS QT + V+ QG +
Sbjct: 81 QVDQLQLH-GVNAACLNSSQTALEQREVMDACSQGKI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER L TD L H +A F VDEAH
Sbjct: 117 --KLLYVAPER------------------------LLTD-YFLSHLSNWNVALFAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|134079141|emb|CAK45953.1| unnamed protein product [Aspergillus niger]
Length = 1548
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 23/164 (14%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQQ 279
F R FR Q +A A+++ +D FVL+PTGGGKSLCYQ ++T G+
Sbjct: 710 FHLRGFRLNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSVVTSGSTRGVTIVISPLLS 769
Query: 280 TVSQAAAVLQELR-QGLVLSQHYFLHQLIFVL-TCASRKDKPSCKLLYVTPERIVGNQSF 337
+ + L L + +L+ Q ++L T + + +LLY+TPE + +Q+
Sbjct: 770 LMQDQVSHLNRLNIKAYLLNGETPKEQRQWILSTLSGSMAEEDIELLYITPEMVNKSQAI 829
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
++ L+ L+R R+LA V+DEAHCV
Sbjct: 830 TKSLEKLNR--------------------SRKLARIVIDEAHCV 853
>gi|254491083|ref|ZP_05104264.1| ATP-dependent DNA helicase RecQ [Methylophaga thiooxidans DMS010]
gi|224463596|gb|EEF79864.1| ATP-dependent DNA helicase RecQ [Methylophaga thiooxydans DMS010]
Length = 708
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 75/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
IFG AFR Q + ++ D VL+PTGGGKSLCY Q
Sbjct: 15 IFGYDAFRHNQQAIVEHVISGGDALVLMPTGGGKSLCYQIPALVRSGTAVVVSPLIALMQ 74
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + G+ A FLNS + +QA V Q+L G +
Sbjct: 75 DQVMALK-QLGVKAAFLNSSLSAAQARDVEQQLEAGQI---------------------- 111
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER++G + +L L R LP +A F +DEA
Sbjct: 112 ---DLLYVAPERLLGER----MLSFLER---------------LP------VALFAIDEA 143
Query: 379 HCV 381
HCV
Sbjct: 144 HCV 146
>gi|317032832|ref|XP_001394458.2| recQ family helicase MusN [Aspergillus niger CBS 513.88]
Length = 1460
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 23/164 (14%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQQ 279
F R FR Q +A A+++ +D FVL+PTGGGKSLCYQ ++T G+
Sbjct: 622 FHLRGFRLNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSVVTSGSTRGVTIVISPLLS 681
Query: 280 TVSQAAAVLQELR-QGLVLSQHYFLHQLIFVL-TCASRKDKPSCKLLYVTPERIVGNQSF 337
+ + L L + +L+ Q ++L T + + +LLY+TPE + +Q+
Sbjct: 682 LMQDQVSHLNRLNIKAYLLNGETPKEQRQWILSTLSGSMAEEDIELLYITPEMVNKSQAI 741
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
++ L+ L+R R+LA V+DEAHCV
Sbjct: 742 TKSLEKLNR--------------------SRKLARIVIDEAHCV 765
>gi|295659502|ref|XP_002790309.1| DNA helicase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281761|gb|EEH37327.1| DNA helicase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 572
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 80/193 (41%), Gaps = 66/193 (34%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ----------- 258
L D++F +FG + FRPLQ + +A++ D F+ T GKSLC+Q
Sbjct: 10 LIDIDFTLRRVFGKKTFRPLQREVIEAAIEGHDVFLQAATSFGKSLCFQLPAIVGHGVTI 69
Query: 259 ----------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
DQ+ L GIP +NS T+++ ++++L LS H
Sbjct: 70 VVSPLLALMVDQVTALEAN-GIPVATINSTTTLTRRREIVKDL-----LSGH-------- 115
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
P+ +LLYVTPE SF L+ +H +G
Sbjct: 116 ----------PTLRLLYVTPE-FCQTDSFRRNLQTVHLQG-------------------- 144
Query: 369 QLAGFVVDEAHCV 381
+LA +DEAHCV
Sbjct: 145 ELARIAIDEAHCV 157
>gi|406901072|gb|EKD43834.1| hypothetical protein ACD_72C00100G0005 [uncultured bacterium]
Length = 619
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 76/183 (41%), Gaps = 72/183 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FR Q + + + K+D FVL+PTGGGKSLCYQ D
Sbjct: 12 FGYESFRFNQEEIIQTIMQKRDAFVLMPTGGGKSLCYQIPALLFDGLTVVISPLIALMKD 71
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L GI A ++NS + + + ++L D+
Sbjct: 72 QVDALRLN-GIKAAYMNSSMDSDEISDLYEQL-------------------------DRH 105
Query: 320 SCKLLYVTPERIVG-NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++G NQ F L+ L+ ++ F +DEA
Sbjct: 106 EIKLLYVSPERLLGNNQQFLVYLRDLN------------------------ISLFAIDEA 141
Query: 379 HCV 381
HC+
Sbjct: 142 HCI 144
>gi|353234730|emb|CCA66752.1| related to RecQ family helicase RecQL1 [Piriformospora indica DSM
11827]
Length = 888
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 51/227 (22%)
Query: 176 GVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACK 235
G S + SS N + S ++ G F +++ +FG +FR Q C
Sbjct: 76 GFSRENESSNMNARNSLSGRADQRGIDYFSSFDWSGELKKRMKRVFGFDSFRLCQEGICN 135
Query: 236 ASVAKQDCFVLLPTGGGKSLCYQ---------------------DQIITLNLKFGIPATF 274
AS+ +D ++PTGGGKSL YQ DQI+ L+ + GI A
Sbjct: 136 ASMDNRDVIAVMPTGGGKSLTYQLPALLCPGTTLVISPLISLITDQILHLH-EAGIEACM 194
Query: 275 LNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGN 334
L + + + LQ + + ++ + KL+YVTPE+I +
Sbjct: 195 LTGSASKEEQRSTLQRMTPKATNGRR---------ISAVDGQADGEIKLVYVTPEKIAKS 245
Query: 335 QSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+SF VL+ + + G+ LA V+DEAHCV
Sbjct: 246 KSFLSVLQKMEKAGT--------------------LARIVIDEAHCV 272
>gi|350631262|gb|EHA19633.1| RecQ family helicase MusN [Aspergillus niger ATCC 1015]
Length = 1452
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 23/164 (14%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQQ 279
F R FR Q +A A+++ +D FVL+PTGGGKSLCYQ ++T G+
Sbjct: 628 FHLRGFRLNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSVVTSGSTRGVTIVISPLLS 687
Query: 280 TVSQAAAVLQELR-QGLVLSQHYFLHQLIFVL-TCASRKDKPSCKLLYVTPERIVGNQSF 337
+ + L L + +L+ Q ++L T + + +LLY+TPE I +Q+
Sbjct: 688 LMQDQVSHLNRLNIKAYLLNGETPKEQRQWILSTLSGSLAEEDIELLYITPEMINKSQAI 747
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ L+ L+R R+LA V+DEAHCV
Sbjct: 748 TRSLEKLNR--------------------SRKLARIVIDEAHCV 771
>gi|310790854|gb|EFQ26387.1| RecQ family ATP-dependent DNA helicase [Glomerella graminicola
M1.001]
Length = 1602
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 77/168 (45%), Gaps = 31/168 (18%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATF 274
F R FR Q +A A++A +D FVL+PTGGGKSLCYQ II+ GI P
Sbjct: 709 FRMRGFRSNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAIISSGKTRGITIVVSPLLS 768
Query: 275 LNSQQTVSQAAAVLQELR-QGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVG 333
L Q +A +Q + G +Q IF + R + +LLYVTPE +
Sbjct: 769 LMQDQVDHMSALNIQAVSLNGETNAQK---RNQIFS-SFKERSPELYIQLLYVTPEMLNN 824
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+Q+F L L+ ++LA V+DEAHCV
Sbjct: 825 SQNFMRALTNLY--------------------SNKRLARIVIDEAHCV 852
>gi|226287868|gb|EEH43381.1| DNA helicase [Paracoccidioides brasiliensis Pb18]
Length = 572
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 80/193 (41%), Gaps = 66/193 (34%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ----------- 258
L D++F +FG + FRPLQ + +A++ D F+ T GKSLC+Q
Sbjct: 10 LIDIDFTLRRVFGKKTFRPLQREVIEAAIEGHDVFLQAATSFGKSLCFQLPAIVGHGVTI 69
Query: 259 ----------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
DQ+ L GIP +NS T+++ ++++L LS H
Sbjct: 70 VVSPLLALMVDQVTALEAN-GIPVATINSTTTLTRRREIVKDL-----LSGH-------- 115
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
P+ +LLYVTPE SF L+ +H +G
Sbjct: 116 ----------PTLRLLYVTPE-FCQTDSFRRNLQTVHVQG-------------------- 144
Query: 369 QLAGFVVDEAHCV 381
+LA +DEAHCV
Sbjct: 145 ELARIAIDEAHCV 157
>gi|387592527|gb|EIJ87551.1| hypothetical protein NEQG_02098 [Nematocida parisii ERTm3]
gi|387595153|gb|EIJ92778.1| hypothetical protein NEPG_02177 [Nematocida parisii ERTm1]
Length = 861
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 58/202 (28%)
Query: 202 LSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---- 257
L+F+++QA + +F FR Q Q A + +D FVL+PTGGGKSL +
Sbjct: 309 LTFKQIQAYVCLR----KVFRLYDFRQNQLQIISAVLDGRDVFVLMPTGGGKSLTFQLPA 364
Query: 258 -----------------QDQIITLNLKFGIPATFLNSQQTVSQA-AAVLQELRQGLVLSQ 299
QDQI L L GIPA +NS T S+ A L GL +
Sbjct: 365 IISRGITVVVSPLLALIQDQIKNL-LAKGIPAVAINSSLTKSERDIAYHMILMVGLDKDK 423
Query: 300 HYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDV 359
H + K P K++Y TPE +V +Q+F+ L+ L +
Sbjct: 424 HE-----------PTEKRMPVTKIVYATPELLVESQTFNRALETLSQ------------- 459
Query: 360 VVLPHTCQRQLAGFVVDEAHCV 381
Q +L FV+DEAHCV
Sbjct: 460 -------QNRLTRFVIDEAHCV 474
>gi|302883319|ref|XP_003040560.1| hypothetical protein NECHADRAFT_88354 [Nectria haematococca mpVI
77-13-4]
gi|256721447|gb|EEU34847.1| hypothetical protein NECHADRAFT_88354 [Nectria haematococca mpVI
77-13-4]
Length = 838
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 77/175 (44%), Gaps = 45/175 (25%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQ-Q 279
F + FR Q +A A++ +D FVL+PTGGGKSLCYQ +PA + Q
Sbjct: 75 FRMKRFRHNQLEAINATLGGKDAFVLMPTGGGKSLCYQ-----------LPAVVKTGKTQ 123
Query: 280 TVSQAAAVLQELRQGLVLSQHYF-LHQLIFVLTCAS------------RKDKPSCKLLYV 326
V+ + L L Q V + + F C++ R + +LLYV
Sbjct: 124 GVTIVVSPLLSLMQDQVDHMKSLGIQAVAFNGECSAEYKRQVMTAFKERSPEDYIELLYV 183
Query: 327 TPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
TPE + N +F+ ++ LH KG +LA V+DEAHCV
Sbjct: 184 TPEMVSKNITFNNGMRTLHDKG--------------------KLARIVIDEAHCV 218
>gi|295673364|ref|XP_002797228.1| ATP-dependent DNA helicase Q1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282600|gb|EEH38166.1| ATP-dependent DNA helicase Q1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1550
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 23/173 (13%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI 270
D++ A + FG FR Q +A A+++ +D FVL+PTGGGKSLCYQ ++ G+
Sbjct: 682 DVKSALLHRFGLSGFRLNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVVNSGTTKGV 741
Query: 271 PATFLNSQQTVSQAAAVLQELR-QGLVLSQHYFL-HQLIFVLTCASRKDKPSCKLLYVTP 328
+ A L+EL Q +L+ H+ + A+ + +LLYVTP
Sbjct: 742 TVVISPLLSLMEDQVAHLKELHIQAFLLNGDVSKEHKSLIYSALANPNVEKLIQLLYVTP 801
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E + N + L LH +++LA V+DEAHCV
Sbjct: 802 EMVNKNGALLGALSHLH--------------------SRKKLARIVIDEAHCV 834
>gi|452978196|gb|EME77960.1| hypothetical protein MYCFIDRAFT_216933 [Pseudocercospora fijiensis
CIRAD86]
Length = 1607
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 76/187 (40%), Gaps = 67/187 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+F + FR Q +A A++ QD FVL+PTGGGKSL Y
Sbjct: 701 VFKLKGFRKNQLEAINATLEGQDVFVLMPTGGGKSLTYQLPALVPTGKTQGVTIVISPLL 760
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L K G+ AT +NS+ + + ++ L
Sbjct: 761 SLMQDQVEHLR-KLGVQATLINSETSREERDLIMDAL---------------------WD 798
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
R+ + +LLYVTPE + ++ + LHRK R+LA V
Sbjct: 799 REPERMVQLLYVTPEMLGKSEKMLRTFEGLHRK--------------------RKLARIV 838
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 839 IDEAHCV 845
>gi|403174685|ref|XP_003333617.2| hypothetical protein PGTG_15039 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171080|gb|EFP89198.2| hypothetical protein PGTG_15039 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 796
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 42/182 (23%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
I+G +FR Q C A ++ +D V++PTGGGKSL YQ
Sbjct: 102 IWGIESFRLNQEAVCNAVLSNRDVLVIMPTGGGKSLTYQLPAVLSEGTSLVISPLVALMA 161
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ + L + G+PA LN+ + AA +++ L +V + + A D
Sbjct: 162 DQNMHLK-EAGVPAEMLNASTSRQDAALIMKRLLHSVVDQKPKRGSKSSKGKEKAHEDDL 220
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL YVTPE+I +++F L+ ++ G +L+ ++DEA
Sbjct: 221 APIKLCYVTPEKIAKSKTFVSTLQKMYGAG--------------------RLSRVIIDEA 260
Query: 379 HC 380
HC
Sbjct: 261 HC 262
>gi|225680226|gb|EEH18510.1| ATP-dependent DNA helicase recQ [Paracoccidioides brasiliensis
Pb03]
Length = 572
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 80/193 (41%), Gaps = 66/193 (34%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ----------- 258
L D++F +FG + FRPLQ + +A++ D F+ T GKSLC+Q
Sbjct: 10 LIDIDFTLRRVFGKKTFRPLQREVIEAAIEGHDVFLQAATSFGKSLCFQLPAIVGHGVTI 69
Query: 259 ----------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
DQ+ L GIP +NS T+++ ++++L LS H
Sbjct: 70 VVSPLLALMVDQVTALEAN-GIPVATINSTTTLTRRREIVKDL-----LSGH-------- 115
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
P+ +LLYVTPE SF L+ +H +G
Sbjct: 116 ----------PTLRLLYVTPE-FCQTDSFRRNLQTVHVQG-------------------- 144
Query: 369 QLAGFVVDEAHCV 381
+LA +DEAHCV
Sbjct: 145 ELARIAIDEAHCV 157
>gi|403411346|emb|CCL98046.1| predicted protein [Fibroporia radiculosa]
Length = 862
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 80/197 (40%), Gaps = 58/197 (29%)
Query: 206 ELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------- 258
E + D + +FG FR QH C A++ ++D ++PTGGGKSL YQ
Sbjct: 154 EYEWSDALRGKMKAVFGIDNFRLCQHGVCNANMDRRDIICVMPTGGGKSLTYQLPALFVS 213
Query: 259 --------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLH 304
DQI+ L + G+ A S + +A +E+ LV H
Sbjct: 214 GCTLVISPLISLMNDQILHLR-EAGVEAVMFTSSTSKEEA----REIDNRLVAMAH---- 264
Query: 305 QLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPH 364
KL YVTPE+I N++F +L+ L++
Sbjct: 265 --------GRSGSDADIKLCYVTPEKIAKNKAFMPLLEKLYK------------------ 298
Query: 365 TCQRQLAGFVVDEAHCV 381
R+L FV+DEAHCV
Sbjct: 299 --ARKLERFVIDEAHCV 313
>gi|225681066|gb|EEH19350.1| ATP-dependent DNA helicase hus2/rqh1 [Paracoccidioides brasiliensis
Pb03]
Length = 1550
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 23/173 (13%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI 270
D++ A + FG FR Q +A A+++ +D FVL+PTGGGKSLCYQ ++ G+
Sbjct: 683 DVKSALLHRFGLSGFRLNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVVNSGTTKGV 742
Query: 271 PATFLNSQQTVSQAAAVLQELR-QGLVLSQHYFL-HQLIFVLTCASRKDKPSCKLLYVTP 328
+ A L+EL Q +L+ H+ + A+ + +LLYVTP
Sbjct: 743 TVVISPLLSLMEDQVAHLKELHIQAFLLNGDVNKEHKSLIYSALANPNVEKLIQLLYVTP 802
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E + N + L LH +++LA V+DEAHCV
Sbjct: 803 EMVNKNGALLGALSRLH--------------------SRKKLARIVIDEAHCV 835
>gi|67523261|ref|XP_659691.1| hypothetical protein AN2087.2 [Aspergillus nidulans FGSC A4]
gi|8101762|gb|AAF72650.1|AF259396_1 RecQ helicase MUSN [Emericella nidulans]
gi|40745763|gb|EAA64919.1| hypothetical protein AN2087.2 [Aspergillus nidulans FGSC A4]
gi|259487457|tpe|CBF86151.1| TPA: Putative uncharacterized proteinRecQ helicase MUSN ;
[Source:UniProtKB/TrEMBL;Acc:Q9P8H3] [Aspergillus
nidulans FGSC A4]
Length = 1534
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 44/196 (22%)
Query: 199 HGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ 258
HGTL + + D++ A F R FRP Q +A ++++ +D FVL+PTGGGKSLCYQ
Sbjct: 675 HGTL-WGQHPWTKDVKIALKERFHLRGFRPNQLEAIDSTLSGKDTFVLMPTGGGKSLCYQ 733
Query: 259 -DQIITLNLKFGIPATFLNSQQTVSQAAAVLQE----LRQGLVLSQHYFLH-------QL 306
+I+ G+ T + +S +++Q+ LRQ + + Y ++ +
Sbjct: 734 LPSVISSGSTRGV--TLV-----ISPLLSLMQDQVSHLRQNKI--KAYLINGDTPSEERQ 784
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
+ T +S + +LLY+TPE I + + ++ ++ L C
Sbjct: 785 WIMSTLSSHNPETHIELLYITPEMISKSHALTDRIEKL---------------------C 823
Query: 367 Q-RQLAGFVVDEAHCV 381
++LA V+DEAHCV
Sbjct: 824 SIQKLARVVIDEAHCV 839
>gi|428224630|ref|YP_007108727.1| ATP-dependent DNA helicase RecQ [Geitlerinema sp. PCC 7407]
gi|427984531|gb|AFY65675.1| ATP-dependent DNA helicase RecQ [Geitlerinema sp. PCC 7407]
Length = 741
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 80/193 (41%), Gaps = 68/193 (35%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ----------- 258
D +E A FG +FRP Q + +A++ ++D V++PTGGGKSLC+Q
Sbjct: 12 FDTLEDALKHFFGYESFRPGQREIVEAALDRRDVMVIMPTGGGKSLCFQLPALLNSGVSV 71
Query: 259 ----------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
DQ+ +L K G+ ATFLNS + + + E+ G +
Sbjct: 72 VVSPLIALMQDQVASLQ-KNGVGATFLNSSISGEEVRSRQNEILDGRI------------ 118
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
KLLYV PER++ Q + DV Q
Sbjct: 119 -------------KLLYVAPERLLNEQFL----------------LWLNDV-----RQQV 144
Query: 369 QLAGFVVDEAHCV 381
L+ FV+DEAHCV
Sbjct: 145 GLSTFVIDEAHCV 157
>gi|226292234|gb|EEH47654.1| ATP-dependent DNA helicase Q1 [Paracoccidioides brasiliensis Pb18]
Length = 1550
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI 270
D++ A + FG FR Q +A A++ +D FVL+PTGGGKSLCYQ ++ G+
Sbjct: 683 DVKSALLHRFGLSGFRLNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVNSGTTKGV 742
Query: 271 PATFLNSQQTVSQAAAVLQELR-QGLVLSQHYFL-HQLIFVLTCASRKDKPSCKLLYVTP 328
+ A L+EL Q +L+ H+ + A+ + +LLYVTP
Sbjct: 743 TVVISPLLSLMEDQVAHLKELHIQAFLLNGDVNKEHKSLIYSALANPNVEKLIQLLYVTP 802
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E + N + L LH +++LA V+DEAHCV
Sbjct: 803 EMVNKNGALLGALSRLH--------------------SRKKLARIVIDEAHCV 835
>gi|127514402|ref|YP_001095599.1| ATP-dependent DNA helicase RecQ [Shewanella loihica PV-4]
gi|126639697|gb|ABO25340.1| ATP-dependent DNA helicase RecQ [Shewanella loihica PV-4]
Length = 610
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 74/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FR Q + + QD V++PTGGGKSLCYQ
Sbjct: 23 VFGYRTFRTGQREVIEQVCGGQDALVIMPTGGGKSLCYQLPALVLHGLTLVVSPLISLMK 82
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L + G+ A +LNS Q+ +A + ++L G
Sbjct: 83 DQVDSLK-QMGVAAAYLNSSQSREEALTIYRQLHNG------------------------ 117
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ + SF E L L L+ F +DEA
Sbjct: 118 -ELKLLYVSPERLLTD-SFIERLHNL------------------------PLSLFAIDEA 151
Query: 379 HCV 381
HC+
Sbjct: 152 HCI 154
>gi|213408509|ref|XP_002175025.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
gi|212003072|gb|EEB08732.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
Length = 1283
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 75/186 (40%), Gaps = 69/186 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------- 258
F + FR Q +A ++A +D FVL+PTGGGKSLCYQ
Sbjct: 475 FQLKGFRKNQIEAINGTLAGKDVFVLMPTGGGKSLCYQLPAVMETGNSRGVTLVISPLLS 534
Query: 259 ---DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
DQ+ L K IPA L+ +Q + V+ F++
Sbjct: 535 LMQDQLEHLR-KLNIPALPLSGEQPSDERKQVIS------------------FLMA---- 571
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
K KLLYVTPE + N + S VL+ L+ ++ LA V+
Sbjct: 572 -KKVQVKLLYVTPEGLASNGAISRVLESLY--------------------TRKLLARIVI 610
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 611 DEAHCV 616
>gi|326471382|gb|EGD95391.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1556
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI 270
D++ A F R FRP Q +A ++++ +D FVL+PTGGGKSLCYQ II G+
Sbjct: 692 DVKSAMRETFKLRGFRPNQLEAINSTLSGKDTFVLMPTGGGKSLCYQLPSIIRTGKTKGV 751
Query: 271 PATFLNSQQTVSQAAAVLQELR-QGLVLSQHYFLHQLIFVL-TCASRKDKPSCKLLYVTP 328
+ A LQ+L + +++ + ++ S + +LLYVTP
Sbjct: 752 TIVISPLLSLMQDQVAHLQKLNVKAFLINGDVSKDERATIMNNLRSLRADSLIQLLYVTP 811
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E + +++ VL LH +LA V+DEAHCV
Sbjct: 812 EMLAKSRAMESVLLQLH--------------------SNDKLARIVIDEAHCV 844
>gi|154281633|ref|XP_001541629.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411808|gb|EDN07196.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1557
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 23/173 (13%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI 270
D++ A + F FRP Q +A A+++ +D FVL+PTGGGKSLCYQ +I G+
Sbjct: 673 DVKHALLHRFQLNGFRPNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPSVIQSGTTKGV 732
Query: 271 PATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS--CKLLYVTP 328
+ A L+ L L + V+ A R + +LLYVTP
Sbjct: 733 TVVISPLLSLMEDQVAHLKRLHIQAFLLNGDVSREGKKVIYGALRNARVEHLIQLLYVTP 792
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E + N + ++L LH + +LA V+DEAHCV
Sbjct: 793 EMVNKNGALLDILSHLH--------------------SRHKLARIVIDEAHCV 825
>gi|348026653|ref|YP_004766458.1| ATP-dependent DNA helicase RecQ [Megasphaera elsdenii DSM 20460]
gi|341822707|emb|CCC73631.1| ATP-dependent DNA helicase RecQ [Megasphaera elsdenii DSM 20460]
Length = 606
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP QH+ + + +DC ++PTG GKS+C+Q D
Sbjct: 11 FGYTSFRPGQHEVIQTLLEGRDCLAIMPTGAGKSICFQLPALMMPGVTLVISPLISLMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L + IPAT++NSQ T +A A +R G V
Sbjct: 71 QVDSL-VNQEIPATYINSQCTFEEAKARFAAIRAGRV----------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KL+Y++PER+ N+ F+ ++ L ++ F++DEAH
Sbjct: 107 --KLVYISPERL-ENEFFTSFMQSL------------------------PISMFIIDEAH 139
Query: 380 CV 381
CV
Sbjct: 140 CV 141
>gi|387126473|ref|YP_006295078.1| ATP-dependent DNA helicase RecQ [Methylophaga sp. JAM1]
gi|386273535|gb|AFI83433.1| ATP-dependent DNA helicase RecQ [Methylophaga sp. JAM1]
Length = 708
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 73/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG AFR Q +A D VL+PTGGGKSLCY Q
Sbjct: 15 VFGYSAFRHNQQTIVDHVIAGGDALVLMPTGGGKSLCYQLPALIRQGTGVVVSPLIALMQ 74
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + G+ A FLNS + ++A AV +L G +
Sbjct: 75 DQVMALQ-QLGVNAAFLNSSLSAAEANAVETQLEAGQI---------------------- 111
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER++ ++ + +L+ Q++ F +DEA
Sbjct: 112 ---DLLYVAPERLLNERTLAMLLRI-------------------------QVSLFAIDEA 143
Query: 379 HCV 381
HCV
Sbjct: 144 HCV 146
>gi|443243562|ref|YP_007376787.1| ATP-dependent DNA helicase [Nonlabens dokdonensis DSW-6]
gi|442800961|gb|AGC76766.1| ATP-dependent DNA helicase [Nonlabens dokdonensis DSW-6]
Length = 720
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 22/95 (23%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ Q +A +D V++PTGGGKS+C+Q D
Sbjct: 11 FGYDSFRPLQEQVIDDVIAGKDLMVVMPTGGGKSMCFQLPSLLLDGITLVVSPLIALMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQG 294
Q+ L GIPA++ NS Q Q +LQELR G
Sbjct: 71 QVDALRAN-GIPASYFNSSQDAKQQEEMLQELRSG 104
>gi|171057247|ref|YP_001789596.1| ATP-dependent DNA helicase RecQ [Leptothrix cholodnii SP-6]
gi|170774692|gb|ACB32831.1| ATP-dependent DNA helicase RecQ [Leptothrix cholodnii SP-6]
Length = 659
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 72/187 (38%), Gaps = 72/187 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG AFR Q + VA D VL+PTGGGKSLCYQ
Sbjct: 19 VFGYSAFRGQQQAIIEHVVAGGDALVLMPTGGGKSLCYQVPAIVRQRAGQGVAVVVSPLI 78
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L + G+ A+FLNS +QA A+ +EL G
Sbjct: 79 ALMHDQVGALE-EVGVHASFLNSTLDNAQAQAIERELLSG-------------------- 117
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
+LYV PER++ +L LH +G + L F
Sbjct: 118 -----RLTMLYVAPERLL-TPRLQGMLASLHERGRLSL--------------------FA 151
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 152 IDEAHCV 158
>gi|260221542|emb|CBA30210.1| ATP-dependent DNA helicase recQ [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 615
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 72/187 (38%), Gaps = 72/187 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG +AFR Q + +A D VL+PTGGGKSLCYQ
Sbjct: 10 VFGYQAFRGPQQAIVEHVIAGGDALVLMPTGGGKSLCYQVPAIARQQAGLGATLVISPLI 69
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L+ + G+ A FLNS T +A + Q+L +G
Sbjct: 70 ALMHDQVGALH-EAGVSAAFLNSTLTSDEAYQIEQQLLRG-------------------- 108
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLY PER V N F +L L +G + L F
Sbjct: 109 -----EITLLYAAPER-VSNARFLALLDSLFERGKLSL--------------------FA 142
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 143 IDEAHCV 149
>gi|359458485|ref|ZP_09247048.1| ATP-dependent DNA helicase RecQ [Acaryochloris sp. CCMEE 5410]
Length = 739
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 75/182 (41%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG FR Q +A++ +QD V++PTGGGKSLC+ QD
Sbjct: 23 FGYDQFRVGQRPVIEAALQQQDLMVVMPTGGGKSLCFQLPGLLLPGLTVVISPLIALMQD 82
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL + IPATFLNS + A + E+ G +
Sbjct: 83 QVTTLQVN-DIPATFLNSSIDAATARQRISEIYSGKI----------------------- 118
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ ++SF +L + Q LA F VDEAH
Sbjct: 119 --KLLYVAPERLL-HESFLNLLDQVQ--------------------AQVGLAAFAVDEAH 155
Query: 380 CV 381
CV
Sbjct: 156 CV 157
>gi|354595778|ref|ZP_09013795.1| ATP-dependent DNA helicase RecQ [Brenneria sp. EniD312]
gi|353673713|gb|EHD19746.1| ATP-dependent DNA helicase RecQ [Brenneria sp. EniD312]
Length = 610
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 71/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + A+++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQEIINATISGRDCLVIMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L +G+ A LNS QT Q V+ R G +
Sbjct: 81 QVDQLQ-AYGVSAACLNSTQTREQQHEVMAGCRSGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER LTTD L H + + VDEAH
Sbjct: 117 --KLLYIAPER------------------------LTTD-SFLDHLIHWRPSLIAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|268680155|ref|YP_003304586.1| ATP-dependent DNA helicase RecQ [Sulfurospirillum deleyianum DSM
6946]
gi|268618186|gb|ACZ12551.1| ATP-dependent DNA helicase RecQ [Sulfurospirillum deleyianum DSM
6946]
Length = 596
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 75/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG+ FR Q +A A +A +D ++LPTG GKSLCYQ
Sbjct: 11 VFGHHHFRANQEEAVNAILAHKDLMMILPTGAGKSLCYQLPSLVMEGLSVVISPLLALMH 70
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQI L+ FGI A+ ++S Q+ + +Q R+G
Sbjct: 71 DQITALS-AFGIKASMISSMQSPQEIQESMQACRKG------------------------ 105
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PER+ G +SF L+ L C + FV+DEA
Sbjct: 106 -ELKLLYVAPERLKG-ESFLHFLQTL---------------------C---INFFVIDEA 139
Query: 379 HCV 381
HCV
Sbjct: 140 HCV 142
>gi|327303226|ref|XP_003236305.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
gi|326461647|gb|EGD87100.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
Length = 1556
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI 270
D++ A F R FRP Q +A ++++ +D FVL+PTGGGKSLCYQ II G+
Sbjct: 692 DVKSAMRETFKLRGFRPNQLEAINSTLSGKDTFVLMPTGGGKSLCYQLPSIIRTGKTKGV 751
Query: 271 PATFLNSQQTVSQAAAVLQELR-QGLVLSQHYFLHQLIFVL-TCASRKDKPSCKLLYVTP 328
+ A LQ+L + +++ + ++ S + +LLYVTP
Sbjct: 752 TIVISPLLSLMQDQVAHLQKLNVKAFLINGDVSKDERATIMNNLRSLRADSLIQLLYVTP 811
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E + +++ VL LH +LA V+DEAHCV
Sbjct: 812 EMLAKSRAMESVLLQLH--------------------SNDKLARIVIDEAHCV 844
>gi|19114004|ref|NP_593092.1| RecQ type DNA helicase Rqh1 [Schizosaccharomyces pombe 972h-]
gi|1175484|sp|Q09811.1|HUS2_SCHPO RecName: Full=ATP-dependent DNA helicase hus2/rqh1
gi|1019410|emb|CAA91177.1| RecQ type DNA helicase Rqh1 [Schizosaccharomyces pombe]
gi|1684754|emb|CAA70577.1| DNA-helicase [Schizosaccharomyces pombe]
Length = 1328
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 74/186 (39%), Gaps = 69/186 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------- 258
F + FR Q +A +++ +D F+L+PTGGGKSLCYQ
Sbjct: 515 FHLKGFRKNQLEAINGTLSGKDVFILMPTGGGKSLCYQLPAVIEGGASRGVTLVISPLLS 574
Query: 259 ---DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
DQ+ L K IP+ L+ +Q + V+ L VL
Sbjct: 575 LMQDQLDHLR-KLNIPSLPLSGEQPADERRQVISFLMAKNVL------------------ 615
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
KLLYVTPE + N + + VLK L+ + + LA V+
Sbjct: 616 -----VKLLYVTPEGLASNGAITRVLKSLYER--------------------KLLARIVI 650
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 651 DEAHCV 656
>gi|315050368|ref|XP_003174558.1| ATP-dependent DNA helicase hus2/rqh1 [Arthroderma gypseum CBS
118893]
gi|311339873|gb|EFQ99075.1| ATP-dependent DNA helicase hus2/rqh1 [Arthroderma gypseum CBS
118893]
Length = 1412
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 79/195 (40%), Gaps = 67/195 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------- 257
D++ A F R FRP Q +A ++++ +D FVL+PTGGGKSLCY
Sbjct: 675 DVKSAMRETFKLRGFRPNQLEAINSTLSGKDTFVLMPTGGGKSLCYQLPSIIRTGKTKGV 734
Query: 258 -----------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
QDQ+ L K + A +N + + A+++ LR
Sbjct: 735 TIVISPLLSLMQDQVAHLQ-KLNVKAFLINGDVSKDERASIMNNLR-------------- 779
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
S + +LLYVTPE + +++ VL LH
Sbjct: 780 -------SLRADSLIQLLYVTPEMLAKSRAIESVLLQLH--------------------S 812
Query: 367 QRQLAGFVVDEAHCV 381
+LA V+DEAHCV
Sbjct: 813 NDKLARIVIDEAHCV 827
>gi|239610810|gb|EEQ87797.1| RecQ family helicase RecQ [Ajellomyces dermatitidis ER-3]
gi|327350343|gb|EGE79200.1| RecQ family helicase RecQ [Ajellomyces dermatitidis ATCC 18188]
Length = 574
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 66/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++F +FG +AFRPLQ + +A++A D F+ T GKSLC+Q
Sbjct: 12 DIDFTLRRVFGKKAFRPLQREVIEAAIAGHDVFLQAATSFGKSLCFQLPAIVGHGVTVVV 71
Query: 259 --------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
DQ+ L GIP +NS +++ ++++L LS H
Sbjct: 72 SPLLALMVDQVAALEAN-GIPVATINSTTPLTKRREIVKDL-----LSGH---------- 115
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE +F L+ +H +G +L
Sbjct: 116 --------PITRLLYVTPE-YCQTDAFRRNLQTVHLQG--------------------EL 146
Query: 371 AGFVVDEAHCV 381
A +DEAHCV
Sbjct: 147 ARIAIDEAHCV 157
>gi|74203917|dbj|BAE28550.1| unnamed protein product [Mus musculus]
Length = 634
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 65/182 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F + FRPLQ + ++A++D F+++PTGGGKSLCYQ
Sbjct: 86 VFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLME 145
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + GI AT LN+ + V E+
Sbjct: 146 DQLMVLK-QLGISATMLNASSSKEHVKWVHAEMVN-----------------------KN 181
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YVTPE+I ++ F L+ + G +L G VDE
Sbjct: 182 SQLKLIYVTPEKIAKSKMFMSRLEKAYEAG--------------------RLTGVAVDEV 221
Query: 379 HC 380
HC
Sbjct: 222 HC 223
>gi|326479495|gb|EGE03505.1| RecQ family helicase MusN [Trichophyton equinum CBS 127.97]
Length = 1531
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI 270
D++ A F R FRP Q +A ++++ +D FVL+PTGGGKSLCYQ II G+
Sbjct: 661 DVKSAMRETFKLRGFRPNQLEAINSTLSGKDTFVLMPTGGGKSLCYQLPSIIRTGKTKGV 720
Query: 271 PATFLNSQQTVSQAAAVLQELR-QGLVLSQHYFLHQLIFVL-TCASRKDKPSCKLLYVTP 328
+ A LQ+L + +++ + ++ S + +LLYVTP
Sbjct: 721 TIVISPLLSLMQDQVAHLQKLNVKAFLINGDVSKDERATIMNNLRSLRADSLIQLLYVTP 780
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E + +++ VL LH +LA V+DEAHCV
Sbjct: 781 EMLAKSRAMESVLLQLH--------------------SNDKLARIVIDEAHCV 813
>gi|302653064|ref|XP_003018365.1| RecQ family helicase MusN [Trichophyton verrucosum HKI 0517]
gi|291182004|gb|EFE37720.1| RecQ family helicase MusN [Trichophyton verrucosum HKI 0517]
Length = 1341
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI 270
D++ A F R FRP Q +A ++++ +D FVL+PTGGGKSLCYQ II G+
Sbjct: 692 DVKSAMRETFKLRGFRPNQLEAINSTLSGKDTFVLMPTGGGKSLCYQLPSIIRTGKTKGV 751
Query: 271 PATFLNSQQTVSQAAAVLQELR-QGLVLSQHYFLHQLIFVL-TCASRKDKPSCKLLYVTP 328
+ A LQ+L + +++ + ++ S + +LLYVTP
Sbjct: 752 TIVISPLLSLMQDQVAHLQKLNVKAFLINGDVSKDERATIMNNLRSLRADSLIQLLYVTP 811
Query: 329 ERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
E + +++ VL LH +LA V+DEAHCV
Sbjct: 812 EMLAKSRAMESVLLQLH--------------------SNDKLARIVIDEAHCV 844
>gi|261206438|ref|XP_002627956.1| RecQ family helicase RecQ [Ajellomyces dermatitidis SLH14081]
gi|239593015|gb|EEQ75596.1| RecQ family helicase RecQ [Ajellomyces dermatitidis SLH14081]
Length = 574
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 66/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++F +FG +AFRPLQ + +A++A D F+ T GKSLC+Q
Sbjct: 12 DIDFTLRRVFGKKAFRPLQREVIEAAIAGHDVFLQAATSFGKSLCFQLPAIVGHGVTVVV 71
Query: 259 --------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
DQ+ L GIP +NS +++ ++++L LS H
Sbjct: 72 SPLLALMVDQVAALEAN-GIPVATINSTTPLTKRREIVKDL-----LSGH---------- 115
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE +F L+ +H +G +L
Sbjct: 116 --------PITRLLYVTPE-YCQTDAFRRNLQTVHLQG--------------------EL 146
Query: 371 AGFVVDEAHCV 381
A +DEAHCV
Sbjct: 147 ARIAIDEAHCV 157
>gi|322699139|gb|EFY90903.1| QDE3 protein [Metarhizium acridum CQMa 102]
Length = 1698
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATF 274
F + FR Q +A A++ +D FVL+PTGGGKSLCYQ ++ G+ P
Sbjct: 833 FRMKGFRQNQLEAINATLGGKDAFVLMPTGGGKSLCYQLPAVVRTGKTRGVTIVVSPLLS 892
Query: 275 LNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGN 334
L Q A +Q + S Y Q++ R + +LLYVTPE + N
Sbjct: 893 LMQDQVDHMKALGIQAVAFNGGCSAEY-KRQIMSAFN--ERSPEHFIELLYVTPEMVSMN 949
Query: 335 QSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+F+ ++ L+++G + A V+DEAHCV
Sbjct: 950 PAFNNAMQTLYQRG--------------------KFARLVIDEAHCV 976
>gi|4579746|dbj|BAA75086.1| DNA helicase Q1 [Mus musculus]
Length = 631
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 65/182 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F + FRPLQ + ++A++D F+++PTGGGKSLCYQ
Sbjct: 86 VFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLME 145
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + GI AT LN+ + V E+
Sbjct: 146 DQLMVLK-QLGISATMLNASSSKEHVKWVHAEMVN-----------------------KN 181
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YVTPE+I ++ F L+ + G +L G VDE
Sbjct: 182 SQLKLIYVTPEKIAKSKMFMSRLEKAYEAG--------------------RLTGVAVDEV 221
Query: 379 HC 380
HC
Sbjct: 222 HC 223
>gi|4579744|dbj|BAA75085.1| DNA helicase Q1 [Mus musculus]
Length = 648
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 65/182 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F + FRPLQ + ++A++D F+++PTGGGKSLCYQ
Sbjct: 86 VFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLME 145
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + GI AT LN+ + V E+
Sbjct: 146 DQLMVLK-QLGISATMLNASSSKEHVKWVHAEMVN-----------------------KN 181
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YVTPE+I ++ F L+ + G +L G VDE
Sbjct: 182 SQLKLIYVTPEKIAKSKMFMSRLEKAYEAG--------------------RLTGVAVDEV 221
Query: 379 HC 380
HC
Sbjct: 222 HC 223
>gi|296136620|ref|YP_003643862.1| ATP-dependent DNA helicase RecQ [Thiomonas intermedia K12]
gi|295796742|gb|ADG31532.1| ATP-dependent DNA helicase RecQ [Thiomonas intermedia K12]
Length = 617
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 73/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
++G AFR LQ QA VA +D VL+PTGGGKSLC+ Q
Sbjct: 15 VWGYPAFRSLQAQAIDHVVAGRDALVLMPTGGGKSLCFQIPALLREGMGIVVSPLIALMQ 74
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A FLNS ++A AV + RQG
Sbjct: 75 DQVAALR-ELGLRAAFLNSTLDATEARAVQRAARQG------------------------ 109
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLY+ PER++ + L D+ ++A F +DEA
Sbjct: 110 -ELDLLYMAPERLLSESG----------------QALLDDL---------RIALFAIDEA 143
Query: 379 HCV 381
HCV
Sbjct: 144 HCV 146
>gi|434389644|ref|YP_007100255.1| ATP-dependent DNA helicase RecQ [Chamaesiphon minutus PCC 6605]
gi|428020634|gb|AFY96728.1| ATP-dependent DNA helicase RecQ [Chamaesiphon minutus PCC 6605]
Length = 743
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 77/194 (39%), Gaps = 70/194 (36%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------ 257
+ +E A FG FR Q + ++A +D V++PTGGGKSLC+
Sbjct: 8 FETLEHALKHYFGYDEFRSGQREIITTALANRDLLVVMPTGGGKSLCFQLPALLKNGVTI 67
Query: 258 ---------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
QDQ+ L GIPATFLNS T + + + G +
Sbjct: 68 VVSPLIALMQDQVQLL-ANNGIPATFLNSSITTEEKRDRVAAIHNGEI------------ 114
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSF-SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQ 367
KLLYV PER+ NQ F S L LH++ I
Sbjct: 115 -------------KLLYVAPERL--NQEFISNFLVDLHQEVGI----------------- 142
Query: 368 RQLAGFVVDEAHCV 381
AGF +DEAHCV
Sbjct: 143 ---AGFAIDEAHCV 153
>gi|261854926|ref|YP_003262209.1| ATP-dependent DNA helicase RecQ [Halothiobacillus neapolitanus c2]
gi|261835395|gb|ACX95162.1| ATP-dependent DNA helicase RecQ [Halothiobacillus neapolitanus c2]
Length = 609
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 72/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG AFR Q + ++ +D VL+PTGGGKSLCY Q
Sbjct: 16 VFGYPAFRGPQAEVIDTVMSGRDALVLMPTGGGKSLCYQVPALALSGTAIVVSPLIALMQ 75
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A FLNS QT +A V ++LR G
Sbjct: 76 DQVAALR-QAGVAAAFLNSTQTGEEAQLVRKQLRAG------------------------ 110
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+ LLYV PER++ + S L R SI L +DEA
Sbjct: 111 -TLDLLYVAPERLLNADTLS-----LLRDASINL--------------------IAIDEA 144
Query: 379 HCV 381
HCV
Sbjct: 145 HCV 147
>gi|410694325|ref|YP_003624947.1| ATP-dependent DNA helicase recQ [Thiomonas sp. 3As]
gi|294340750|emb|CAZ89142.1| ATP-dependent DNA helicase recQ [Thiomonas sp. 3As]
Length = 617
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 73/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
++G AFR LQ QA VA +D VL+PTGGGKSLC+ Q
Sbjct: 15 VWGYPAFRSLQAQAIDHVVAGRDALVLMPTGGGKSLCFQIPALLREGVGIVVSPLIALMQ 74
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A FLNS ++A AV + RQG
Sbjct: 75 DQVAALR-ELGLRAAFLNSTLDATEARAVQRAARQG------------------------ 109
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLY+ PER++ + L D+ ++A F +DEA
Sbjct: 110 -ELDLLYMAPERLLSESG----------------QALLDDL---------RIALFAIDEA 143
Query: 379 HCV 381
HCV
Sbjct: 144 HCV 146
>gi|343425568|emb|CBQ69103.1| related to RecQ family helicase RecQL1 [Sporisorium reilianum SRZ2]
Length = 791
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 44/191 (23%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------ 258
D + A + +FG +FR Q A++ ++D V++PTGGGKSLCYQ
Sbjct: 111 DTIRLAALSVFGIPSFRFCQEAVINAAMDRRDAVVVMPTGGGKSLCYQLPAILTPGVTLV 170
Query: 259 ---------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
DQ++ L + GI + L + + A+L+++R G F +
Sbjct: 171 VSPLISLMTDQVLHLQ-EVGIESQLLCGSTSREDSNAILKQIRLGTASDDRSFSSKSGDA 229
Query: 310 LTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
+ D KLLYVTPERI +++ L+ + +G +
Sbjct: 230 SWNQHQND--GIKLLYVTPERIAKSKTCLSALQSAYEQG--------------------R 267
Query: 370 LAGFVVDEAHC 380
L+ V+DEAHC
Sbjct: 268 LSRIVIDEAHC 278
>gi|15928520|gb|AAH14735.1| RecQ protein-like [Mus musculus]
Length = 648
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 65/182 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F + FRPLQ + ++A++D F+++PTGGGKSLCYQ
Sbjct: 86 VFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLME 145
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + GI AT LN+ + V E+
Sbjct: 146 DQLMVLK-QLGISATMLNASSSKEHVKWVHAEMVN-----------------------KN 181
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YVTPE+I ++ F L+ + G +L G VDE
Sbjct: 182 SQLKLIYVTPEKIAKSKMFMSRLEKAYEAG--------------------RLTGVAVDEV 221
Query: 379 HC 380
HC
Sbjct: 222 HC 223
>gi|302926382|ref|XP_003054285.1| hypothetical protein NECHADRAFT_30968 [Nectria haematococca mpVI
77-13-4]
gi|256735226|gb|EEU48572.1| hypothetical protein NECHADRAFT_30968 [Nectria haematococca mpVI
77-13-4]
Length = 1678
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATF 274
F + FR Q +A A++ +D FVL+PTGGGKSLCYQ +I G+ P
Sbjct: 831 FRMKGFRHNQLEAINATLEGKDAFVLMPTGGGKSLCYQLPAVIKSGRTRGVTIVVSPLLS 890
Query: 275 LNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGN 334
L Q A +Q + S Y Q++ R + +LLYVTPE + N
Sbjct: 891 LMQDQVDHMKALGIQAVAFNGECSAQY-KRQVMSAFD--ERSPEHFIELLYVTPEMVSKN 947
Query: 335 QSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+F+ ++ LH KG + A V+DEAHCV
Sbjct: 948 VAFNNGMRTLHSKG--------------------KFARLVIDEAHCV 974
>gi|294899983|ref|XP_002776841.1| ATP-dependent DNA helicase recQ, putative [Perkinsus marinus ATCC
50983]
gi|239884042|gb|EER08657.1| ATP-dependent DNA helicase recQ, putative [Perkinsus marinus ATCC
50983]
Length = 567
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 80/176 (45%), Gaps = 48/176 (27%)
Query: 221 FGNRA-FRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQ 279
FGN+ FRP Q + A ++K+D F+++PTGGGKSLCYQ IPA +N +
Sbjct: 137 FGNQGGFRPNQLETINAVLSKRDVFLVMPTGGGKSLCYQ-----------IPA-LVNHEA 184
Query: 280 TVSQAAAVLQELRQGLVLSQHYFLHQ---LIFVLTCASRKDKPSC-----------KLLY 325
V+ L L+L Q L Q L L+ ++ P ++L+
Sbjct: 185 RRGGTTVVICPL-VSLILDQEAQLSQCGILCAGLSSSAAHTMPPVETFKKLFSGKLRVLF 243
Query: 326 VTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
VTPER+ ++ ++L L+R L GFVVDEAHCV
Sbjct: 244 VTPERLSASKRLLDLLAGLYRNS--------------------LLHGFVVDEAHCV 279
>gi|409082538|gb|EKM82896.1| hypothetical protein AGABI1DRAFT_104723 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 682
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 40/171 (23%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKF-GIPATFLNSQ 278
+FG FR Q +A A++ +D F+L+PTGGGKSLC+Q + N+K G+
Sbjct: 100 VFGLSEFRANQLEAINATMEGKDVFLLMPTGGGKSLCFQLPAVCSNIKTQGVTV------ 153
Query: 279 QTVSQAAAVLQELRQGLV---LSQHYF-----LHQLIFVLTCASRKDKPSCKLLYVTPER 330
VS A++++ L +S Y+ H++ L R KP+ LLY+TPE+
Sbjct: 154 -VVSPLTALMEDQVSALTSRGISAFYWSADSPQHEVNAKLWSGDR--KPA--LLYLTPEK 208
Query: 331 IVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
I + + +L L+ +G QLA F +DEAHC+
Sbjct: 209 IKASPACRNLLLKLYNQG--------------------QLARFAIDEAHCI 239
>gi|197287158|ref|YP_002153030.1| ATP-dependent DNA helicase RecQ [Proteus mirabilis HI4320]
gi|227357149|ref|ZP_03841518.1| ATP-dependent DNA helicase [Proteus mirabilis ATCC 29906]
gi|425070259|ref|ZP_18473373.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW6]
gi|425074080|ref|ZP_18477185.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW4]
gi|194684645|emb|CAR46565.1| ATP-dependent DNA helicase [Proteus mirabilis HI4320]
gi|227162681|gb|EEI47648.1| ATP-dependent DNA helicase [Proteus mirabilis ATCC 29906]
gi|404594320|gb|EKA94907.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW4]
gi|404595525|gb|EKA96065.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW6]
Length = 609
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 79/198 (39%), Gaps = 75/198 (37%)
Query: 208 QALDDMEFANVVI---FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------ 258
+ L+ M A V++ FG + FRP Q + + +DC V++PTGGGKSLCYQ
Sbjct: 5 EVLNSMPSAQVILRETFGYQQFRPGQQEIIDTIITGRDCLVVMPTGGGKSLCYQIPALLL 64
Query: 259 ---------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFL 303
DQ+ L L GI A FLNS Q+ + V ++G +
Sbjct: 65 DGLTVVVSPLISLMKDQVDQLCLH-GIDAAFLNSTQSRDEQLQVQMRCQRGEI------- 116
Query: 304 HQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLP 363
KLLY+ PER++ +SF L
Sbjct: 117 ------------------KLLYIAPERLM-MESF------------------------LH 133
Query: 364 HTCQRQLAGFVVDEAHCV 381
H Q Q A VDEAHC+
Sbjct: 134 HLVQWQPALLAVDEAHCI 151
>gi|326368214|ref|NP_001191835.1| ATP-dependent DNA helicase Q1 isoform 2 [Mus musculus]
Length = 634
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 65/182 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F + FRPLQ + ++A++D F+++PTGGGKSLCYQ
Sbjct: 86 VFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLME 145
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + GI AT LN+ + V E+
Sbjct: 146 DQLMVLK-QLGISATMLNASSSKEHVKWVHAEMVN-----------------------KN 181
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YVTPE+I ++ F L+ + G +L G VDE
Sbjct: 182 SQLKLIYVTPEKIAKSKMFMSRLEKAYEAG--------------------RLTGAAVDEV 221
Query: 379 HC 380
HC
Sbjct: 222 HC 223
>gi|225154844|ref|ZP_03723342.1| ATP-dependent DNA helicase RecQ [Diplosphaera colitermitum TAV2]
gi|224804374|gb|EEG22599.1| ATP-dependent DNA helicase RecQ [Diplosphaera colitermitum TAV2]
Length = 611
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + + S+ +D F LLPTGGGKS+C+Q D
Sbjct: 12 FGYDSFRPLQREIIETSLDGRDVFALLPTGGGKSMCFQLPAMHRVGLTIVVSPLIALMKD 71
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L G+ AT+LNS T +++ + L L +G
Sbjct: 72 QVDQLQAA-GVAATYLNSSLTSTESRSRLAGLHRG------------------------- 105
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ + +++E L+ + +A F +DEAH
Sbjct: 106 EWKLLYVAPERLMLD-NWAENLRAWN------------------------VAAFAIDEAH 140
Query: 380 CV 381
C+
Sbjct: 141 CI 142
>gi|395324100|gb|EJF56547.1| ATP-dependent DNA helicase [Dichomitus squalens LYAD-421 SS1]
Length = 817
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 75/184 (40%), Gaps = 59/184 (32%)
Query: 219 VIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-------------------- 258
+FG +FR Q C A++ ++D ++PTGGGKSL YQ
Sbjct: 104 TVFGFDSFRSCQESICNANLDRRDIVAIMPTGGGKSLGYQLPALLTPGCTLVISPLLALI 163
Query: 259 -DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD 317
DQ++ L+ + G+ A L + + + Q L Q + T +
Sbjct: 164 ADQVMHLH-EAGVDAVMLTGATSKEEQNRIYQRL-------------QAMANGTPGA--- 206
Query: 318 KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDE 377
P KL YVTPE+I ++ F L LHR +LA FV+DE
Sbjct: 207 -PDIKLCYVTPEKIANSKKFKAALDKLHR--------------------VHKLARFVIDE 245
Query: 378 AHCV 381
AHCV
Sbjct: 246 AHCV 249
>gi|346322515|gb|EGX92114.1| RecQ family helicase MusN [Cordyceps militaris CM01]
Length = 1700
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATF 274
F + FR Q +A A+++ QD FVL+PTGGGKSLCYQ ++ G+ P
Sbjct: 813 FRMKGFRQNQLEAINATLSGQDAFVLMPTGGGKSLCYQLPAVVRTGKTRGVTIVISPLLS 872
Query: 275 LNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGN 334
L Q A +Q + S Y Q++ R + +LLY+TPE I N
Sbjct: 873 LMQDQVDHMKALGIQAVAFNGECSAEY-KRQVMNAF--GERSPEHFIELLYITPEMISKN 929
Query: 335 QSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+F+ L+ L++ G + A V+DEAHCV
Sbjct: 930 MAFNAALQKLYQNG--------------------KFARLVIDEAHCV 956
>gi|387891019|ref|YP_006321317.1| ATP-dependent DNA helicase RecQ [Escherichia blattae DSM 4481]
gi|386925852|gb|AFJ48806.1| ATP-dependent DNA helicase RecQ [Escherichia blattae DSM 4481]
Length = 609
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 76/199 (38%), Gaps = 73/199 (36%)
Query: 206 ELQALDDMEFANVVI---FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQII 262
E + L+ + A V+ FG + FRP Q A + QD V++PTGGGKSLCYQ +
Sbjct: 3 EAEVLNQVSLAKQVLQETFGYQQFRPGQEAIIDAILGGQDSLVVMPTGGGKSLCYQIPAL 62
Query: 263 TLN--------------------LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYF 302
L+ L G+PA LNS Q+ Q AV+ R G
Sbjct: 63 ILDGLTVVVSPLISLMKDQVDQLLANGVPAACLNSTQSREQQLAVMNGCRHG-------- 114
Query: 303 LHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVL 362
+LLYV PER++ + ++
Sbjct: 115 -----------------EIRLLYVAPERLMMDSLIDQL---------------------- 135
Query: 363 PHTCQRQLAGFVVDEAHCV 381
Q +LA VDEAHC+
Sbjct: 136 ---SQWKLALLAVDEAHCI 151
>gi|239610645|gb|EEQ87632.1| RecQ family helicase MusN [Ajellomyces dermatitidis ER-3]
gi|327348921|gb|EGE77778.1| RecQ family helicase MusN [Ajellomyces dermatitidis ATCC 18188]
Length = 1562
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 23/160 (14%)
Query: 225 AFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQQTVSQ 283
FRP Q +A A+++ +D FVL+PTGGGKSLCYQ +I G+ +
Sbjct: 693 GFRPNQLEAINATLSGKDVFVLMPTGGGKSLCYQLPSVIQSGKTKGVTVVISPLLSLMED 752
Query: 284 AAAVLQELR-QGLVLSQHYFLHQLIFVLTCASRKD-KPSCKLLYVTPERIVGNQSFSEVL 341
A L++L+ Q VL+ + + + + + +LLYVTPE + N + ++L
Sbjct: 753 QVAHLRDLKIQASVLNGDASKEEKMEIYGALRNANVEKLIQLLYVTPEMVNKNGALLDIL 812
Query: 342 KCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
LH + C +LA V+DEAHCV
Sbjct: 813 SHLHSR------------------C--KLARIVIDEAHCV 832
>gi|123426519|ref|XP_001307056.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
gi|121888663|gb|EAX94126.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
Length = 1279
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 79/198 (39%)
Query: 214 EFANVV------IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------- 258
E+ NV+ +FG+ +FR +Q A A+V D F+L+PTGGGKSLCY
Sbjct: 554 EYINVLNEVNKNVFGHDSFRGVQLPAIAAAVRGNDVFILMPTGGGKSLCYMLTGMVQGGV 613
Query: 259 ---------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFL 303
DQ+ +LN++ A +N + + + +L E +QG V
Sbjct: 614 TLVISPLLSLIKDQVDQLKSLNIQ----AELINYETKQEEESKILNEAKQGRV------- 662
Query: 304 HQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLP 363
+ LY+TPE++ + + S+ L ++
Sbjct: 663 ------------------RFLYMTPEKLNLSGNVSQFLNDIY------------------ 686
Query: 364 HTCQRQLAGFVVDEAHCV 381
Q +L VVDEAHCV
Sbjct: 687 --SQNKLTRIVVDEAHCV 702
>gi|428310069|ref|YP_007121046.1| ATP-dependent DNA helicase RecQ [Microcoleus sp. PCC 7113]
gi|428251681|gb|AFZ17640.1| ATP-dependent DNA helicase RecQ [Microcoleus sp. PCC 7113]
Length = 757
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 104/244 (42%), Gaps = 61/244 (25%)
Query: 143 DAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVSTSSASSVSNKKRSSLISDNEHGTL 202
D I ++CP+ RS + S S V T ASS N+
Sbjct: 10 DRIFRYTACPNTRSVL---------DASRLYSSAVGTIIASSAQNQS------------- 47
Query: 203 SFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQII 262
+LQ+L++ A FG AFRP Q Q + ++A++D V++PTGGGKSLC+Q +
Sbjct: 48 IMYQLQSLEE---ALKHFFGYDAFRPGQRQIVEEALAQRDLLVIMPTGGGKSLCFQ---L 101
Query: 263 TLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQ--HYFLHQLIFVLTCASRKD--- 317
LK G+ VS A++Q+ LV + FL+ + SR+
Sbjct: 102 PALLKPGLTVV-------VSPLIALMQDQVDALVDNGIGATFLNSTLSWDDVRSRELAIL 154
Query: 318 KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDE 377
KLLYV PER++G + + K + G ++ F +DE
Sbjct: 155 NGKIKLLYVAPERLLGEKFLPFLEKVRAQIG---------------------ISAFAIDE 193
Query: 378 AHCV 381
AHCV
Sbjct: 194 AHCV 197
>gi|261195180|ref|XP_002623994.1| RecQ family helicase MusN [Ajellomyces dermatitidis SLH14081]
gi|239587866|gb|EEQ70509.1| RecQ family helicase MusN [Ajellomyces dermatitidis SLH14081]
Length = 1562
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 23/160 (14%)
Query: 225 AFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQQTVSQ 283
FRP Q +A A+++ +D FVL+PTGGGKSLCYQ +I G+ +
Sbjct: 693 GFRPNQLEAINATLSGKDVFVLMPTGGGKSLCYQLPSVIQSGKTKGVTVVISPLLSLMED 752
Query: 284 AAAVLQELR-QGLVLSQHYFLHQLIFVLTCASRKD-KPSCKLLYVTPERIVGNQSFSEVL 341
A L++L+ Q VL+ + + + + + +LLYVTPE + N + ++L
Sbjct: 753 QVAHLRDLKIQASVLNGDASKEEKMEIYGALRNANVEKLIQLLYVTPEMVNKNGALLDIL 812
Query: 342 KCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
LH + C +LA V+DEAHCV
Sbjct: 813 SHLHSR------------------C--KLARIVIDEAHCV 832
>gi|378730872|gb|EHY57331.1| RecQ family helicase RecQ [Exophiala dermatitidis NIH/UT8656]
Length = 510
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 30/176 (17%)
Query: 209 ALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLK 267
+L D+ F +FG AFRPLQ A ++ D F+ T GKSLCYQ +++L +
Sbjct: 11 SLTDLRFTLRRVFGKEAFRPLQEDVISAVLSGHDVFLCAATSFGKSLCYQLPAVVSLGVT 70
Query: 268 FGIPA--TFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLY 325
I +++Q +QA + E G ++ L C PS KLLY
Sbjct: 71 VVISPLLALMHNQVQSAQALGIAVESINGKTPRAEKV--RIETDLLCG----HPSTKLLY 124
Query: 326 VTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
VTPE + F +++ +HR+G QL VDEAHC+
Sbjct: 125 VTPE-LCATDHFRKLILKVHRQG--------------------QLVRIAVDEAHCI 159
>gi|124005481|ref|ZP_01690321.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
gi|123988915|gb|EAY28508.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
Length = 712
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 70/181 (38%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG FRPLQ + A + +D F L+PTGGGKSLCYQ + N
Sbjct: 14 FGYSRFRPLQKEIISAILEGKDVFALMPTGGGKSLCYQVPALMFNGLCVVVSPLIALMKN 73
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
++ IPA +LNS Q+ ++A QEL + C +++
Sbjct: 74 QVAALAQYNIPAAYLNSTQS-NEA----QELIEN----------------KCFNKE---- 108
Query: 321 CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
KLLYV+PE++ +++F LK + Q++ F +DEAHC
Sbjct: 109 IKLLYVSPEKLT-SETFLNFLKII------------------------QVSMFAIDEAHC 143
Query: 381 V 381
+
Sbjct: 144 I 144
>gi|406835090|ref|ZP_11094684.1| ATP-dependent DNA helicase RecQ [Schlesneria paludicola DSM 18645]
Length = 617
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 76/184 (41%), Gaps = 76/184 (41%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
+G AFRPLQ +A +A + +D V+LPTGGGKS+C+Q D
Sbjct: 19 WGYDAFRPLQEEAMRAVLEHRDSIVVLPTGGGKSICFQAPAVAMPGLAVVVSPLISLMKD 78
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + GIPA +NS + S+ V + +R G
Sbjct: 79 QVDALT-ECGIPAACVNSSMSQSERLKVTESIRSG------------------------- 112
Query: 320 SCKLLYVTPERIVGNQ--SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDE 377
+ KLLYV PER+ ++ SF E LK ++ F +DE
Sbjct: 113 TLKLLYVAPERLCNDRMLSFLESLK---------------------------VSFFAIDE 145
Query: 378 AHCV 381
AHC+
Sbjct: 146 AHCI 149
>gi|110625690|ref|NP_075529.2| ATP-dependent DNA helicase Q1 isoform 1 [Mus musculus]
gi|341941960|sp|Q9Z129.2|RECQ1_MOUSE RecName: Full=ATP-dependent DNA helicase Q1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|74215762|dbj|BAE23422.1| unnamed protein product [Mus musculus]
gi|74216639|dbj|BAE37751.1| unnamed protein product [Mus musculus]
gi|148678691|gb|EDL10638.1| RecQ protein-like, isoform CRA_b [Mus musculus]
Length = 648
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 65/182 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F + FRPLQ + ++A++D F+++PTGGGKSLCYQ
Sbjct: 86 VFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLME 145
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + GI AT LN+ + V E+
Sbjct: 146 DQLMVLK-QLGISATMLNASSSKEHVKWVHAEMVN-----------------------KN 181
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YVTPE+I ++ F L+ + G +L G VDE
Sbjct: 182 SQLKLIYVTPEKIAKSKMFMSRLEKAYEAG--------------------RLTGAAVDEV 221
Query: 379 HC 380
HC
Sbjct: 222 HC 223
>gi|326368226|ref|NP_001191836.1| ATP-dependent DNA helicase Q1 isoform 3 [Mus musculus]
gi|74209854|dbj|BAE23625.1| unnamed protein product [Mus musculus]
gi|148678693|gb|EDL10640.1| RecQ protein-like, isoform CRA_d [Mus musculus]
Length = 631
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 65/182 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F + FRPLQ + ++A++D F+++PTGGGKSLCYQ
Sbjct: 86 VFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLME 145
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + GI AT LN+ + V E+
Sbjct: 146 DQLMVLK-QLGISATMLNASSSKEHVKWVHAEMVN-----------------------KN 181
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YVTPE+I ++ F L+ + G +L G VDE
Sbjct: 182 SQLKLIYVTPEKIAKSKMFMSRLEKAYEAG--------------------RLTGAAVDEV 221
Query: 379 HC 380
HC
Sbjct: 222 HC 223
>gi|367004206|ref|XP_003686836.1| hypothetical protein TPHA_0H01970 [Tetrapisispora phaffii CBS 4417]
gi|357525138|emb|CCE64402.1| hypothetical protein TPHA_0H01970 [Tetrapisispora phaffii CBS 4417]
Length = 1355
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 74/187 (39%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F FRP Q A A+++ +D FVL+PTGGGKSLCYQ
Sbjct: 595 VFKLPGFRPNQEDAVNATLSGKDVFVLMPTGGGKSLCYQLPAIIKSGNTKGTTIVVSPLI 654
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L L I A+ +S+ T Q RQ L F+H L+
Sbjct: 655 SLMQDQVDHL-LAKNIKASMFSSKGTADQR-------RQTFNL----FIHGLL------- 695
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
L+Y++PE I ++ + LH G+ LA V
Sbjct: 696 -------DLIYISPEMISASEQCKRAIAKLHEDGN--------------------LARIV 728
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 729 VDEAHCV 735
>gi|154324014|ref|XP_001561321.1| hypothetical protein BC1G_00406 [Botryotinia fuckeliana B05.10]
Length = 1677
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 111/273 (40%), Gaps = 83/273 (30%)
Query: 143 DAILNLS-SCPDGRSQIFTPSSVKHSSKSVDCKSGVSTSSASSVSNKKRSSLISDNEHGT 201
+AIL+L+ G S F PSS K SS + + S SS KR SL SD
Sbjct: 728 EAILDLTHQVEQGNS--FKPSSTK-SSLNASFRDASRDPSRSS----KRGSLKSDKPKDM 780
Query: 202 LSFEELQALD--------DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGK 253
S + D D++ A F + FR Q +A A++A +D F+L+PTGGGK
Sbjct: 781 YSVVDSSRTDMYSHAWSNDVKKALKDRFRLKGFRHNQLEAINATLAGRDAFILMPTGGGK 840
Query: 254 SLCYQ-------------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVL 288
SLCYQ DQ+ L+ K I A NS+ T
Sbjct: 841 SLCYQLPAIVQSGKTKGVTIVVSPLLALMHDQVDHLH-KLRIQAYLFNSEST-------- 891
Query: 289 QELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKG 348
QE RQ QL L RK + +LLYVTPE I + + L L+ K
Sbjct: 892 QETRQ-----------QLFNGLN--ERKPEQFVELLYVTPEMINKSNAIQSKLDDLYAK- 937
Query: 349 SIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
++LA V+DEAHCV
Sbjct: 938 -------------------KRLARIVIDEAHCV 951
>gi|414595339|ref|ZP_11444964.1| ATP-dependent DNA helicase RecQ [Escherichia blattae NBRC 105725]
gi|403193686|dbj|GAB82616.1| ATP-dependent DNA helicase RecQ [Escherichia blattae NBRC 105725]
Length = 630
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 78/203 (38%), Gaps = 73/203 (35%)
Query: 202 LSFEELQALDDMEFANVVI---FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ 258
++ E + L+ + A V+ FG + FRP Q A + QD V++PTGGGKSLCYQ
Sbjct: 20 VNVAEAEVLNQVSLAKQVLQETFGYQQFRPGQEAIIDAILGGQDSLVVMPTGGGKSLCYQ 79
Query: 259 DQIITLN--------------------LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLS 298
+ L+ L G+PA LNS Q+ Q AV+ R G
Sbjct: 80 IPALILDGLTVVVSPLISLMKDQVDQLLANGVPAACLNSTQSREQQLAVMNGCRHG---- 135
Query: 299 QHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTD 358
+LLYV PER++ + ++
Sbjct: 136 ---------------------EIRLLYVAPERLMMDSLIDQL------------------ 156
Query: 359 VVVLPHTCQRQLAGFVVDEAHCV 381
Q +LA VDEAHC+
Sbjct: 157 -------SQWKLALLAVDEAHCI 172
>gi|408675008|ref|YP_006874756.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
gi|387856632|gb|AFK04729.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
Length = 715
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 47/135 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG +FRPLQ + + +A++DC VL+PTGGGKS+C+ QD
Sbjct: 11 FGYDSFRPLQAEIIETIIAQKDCMVLMPTGGGKSICFQVPAMVMPGITLVISPLIALMQD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GIPA FLNS + + + ++ + G
Sbjct: 71 QVQALKSN-GIPAAFLNSTLSTIEQRTIEEDCKNG------------------------- 104
Query: 320 SCKLLYVTPERIVGN 334
S KLLY++PE++ N
Sbjct: 105 SLKLLYISPEKLFSN 119
>gi|426200367|gb|EKV50291.1| hypothetical protein AGABI2DRAFT_64426 [Agaricus bisporus var.
bisporus H97]
Length = 648
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 40/171 (23%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKF-GIPATFLNSQ 278
+FG FR Q +A A++ +D F+L+PTGGGKSLC+Q + N+K G+
Sbjct: 42 VFGLSEFRANQLEAINATMEGKDVFLLMPTGGGKSLCFQLPAVCSNMKTQGVTV------ 95
Query: 279 QTVSQAAAVLQELRQGLV---LSQHYF-----LHQLIFVLTCASRKDKPSCKLLYVTPER 330
VS A++++ L +S Y+ H++ L R KP+ LLY+TPE+
Sbjct: 96 -VVSPLTALMEDQVSALTSRGISAFYWSADSPQHEVNAKLWSGDR--KPA--LLYLTPEK 150
Query: 331 IVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
I + + +L L+ +G QLA F +DEAHC+
Sbjct: 151 IKASPACRNLLLKLYNQG--------------------QLARFAIDEAHCI 181
>gi|452821743|gb|EME28770.1| ATP-dependent DNA helicase RecQ [Galdieria sulphuraria]
Length = 529
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 80/165 (48%), Gaps = 29/165 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLK--FGIPATFLNSQ 278
FG FRPLQ + + + +D F L PTGGGKSLC+Q + L K F I +
Sbjct: 14 FGYENFRPLQQEVITSVLEGKDVFFLAPTGGGKSLCFQLPALLLEGKVSFVISPLVALIE 73
Query: 279 QTVSQAAAVLQELRQGLVLSQHYFLH-QLIFVLTCASRKDK-PSCKLLYVTPERIVGNQS 336
V++ A+ +R +LS H + IF L S K++ PS L+Y+TPE + N+
Sbjct: 74 DQVNKLTAL--NIRAYSILSCQGKKHKERIFSLLEQSHKERLPS--LIYLTPECVSTNR- 128
Query: 337 FSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F ++LK L+R I L F VDEAHC+
Sbjct: 129 FQKLLKSLYRNKEIGL--------------------FAVDEAHCI 153
>gi|354566185|ref|ZP_08985358.1| ATP-dependent DNA helicase RecQ [Fischerella sp. JSC-11]
gi|353546693|gb|EHC16141.1| ATP-dependent DNA helicase RecQ [Fischerella sp. JSC-11]
Length = 719
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 74/182 (40%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG FRP Q + + +++ +D +++PTGGGKSLC+ QD
Sbjct: 15 FGYDNFRPGQREIVEDALSNRDLLIIMPTGGGKSLCFQLPALIKKGLTVVVSPLIALMQD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L K G+ ATFLNS Q + Q + QG V
Sbjct: 75 QVEALR-KNGVAATFLNSSLNSYQTRSREQYILQGKV----------------------- 110
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER+V ++ F L +H + I + F +DEAH
Sbjct: 111 --KLLYVAPERLVSDR-FLPFLDLIHHQVGI--------------------SAFAIDEAH 147
Query: 380 CV 381
CV
Sbjct: 148 CV 149
>gi|407928616|gb|EKG21469.1| Helicase [Macrophomina phaseolina MS6]
Length = 492
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 32/186 (17%)
Query: 200 GTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ- 258
G + + Q + D++F IFG + FRPLQ + A++ K D F+ T GKSLCYQ
Sbjct: 5 GRTARRKSQPMIDIDFTLKRIFGKKTFRPLQREVINAALDKHDIFLQAATSFGKSLCYQL 64
Query: 259 DQIITLNLKFGI-PATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV--LTCASR 315
+I L I P L + Q + AA +++ + S + + + L C
Sbjct: 65 PAVIDHGLTVVISPLLALMNNQVAALRAA---DIKVATINSTTPYSQKTAIMEDLQCG-- 119
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
P +LLY+TPE SF +L+ +H R+LA +
Sbjct: 120 --HPRTRLLYITPE-YCQLDSFRRILRIIH--------------------THRELARIAI 156
Query: 376 DEAHCV 381
DEAHC+
Sbjct: 157 DEAHCI 162
>gi|242237700|ref|YP_002985881.1| ATP-dependent DNA helicase RecQ [Dickeya dadantii Ech703]
gi|242129757|gb|ACS84059.1| ATP-dependent DNA helicase RecQ [Dickeya dadantii Ech703]
Length = 607
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 61/140 (43%), Gaps = 48/140 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A+V+ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQAIIHAAVSGRDCLVIMPTGGGKSLCYQIPALVLDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L +G+ A LNS QT Q AV+ R G +
Sbjct: 81 QVDQLQ-AYGVSAACLNSTQTREQQMAVIAGCRSGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSE 339
+LLY+ PER+ N+ F E
Sbjct: 117 --RLLYIAPERLT-NEGFLE 133
>gi|148678690|gb|EDL10637.1| RecQ protein-like, isoform CRA_a [Mus musculus]
Length = 645
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 65/182 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F + FRPLQ + ++A++D F+++PTGGGKSLCYQ
Sbjct: 86 VFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLME 145
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + GI AT LN+ + V E+
Sbjct: 146 DQLMVLK-QLGISATMLNASSSKEHVKWVHAEMVN-----------------------KN 181
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YVTPE+I ++ F L+ + G +L G VDE
Sbjct: 182 SQLKLIYVTPEKIAKSKMFMSRLEKAYEAG--------------------RLTGAAVDEV 221
Query: 379 HC 380
HC
Sbjct: 222 HC 223
>gi|440636643|gb|ELR06562.1| hypothetical protein GMDG_08035 [Geomyces destructans 20631-21]
Length = 1823
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 75/186 (40%), Gaps = 67/186 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY----------------------- 257
F R FR Q +A A++ +D FVL+PTGGGKSLCY
Sbjct: 878 FHLRGFRQNQLEAINATLGGKDTFVLMPTGGGKSLCYQLPAIIRSGTTRGVTIVISPLLS 937
Query: 258 --QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
QDQ+ L K GI A +NS+ T S V+ L + + FV
Sbjct: 938 LMQDQVDHLQ-KLGIQAFVINSEVTQSYKNMVMSGLEERIPED---------FV------ 981
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
+LLYVTPE + +++ LHR+ +LA V+
Sbjct: 982 ------ELLYVTPEMVTKSEAILSRFASLHRR--------------------HKLARIVI 1015
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 1016 DEAHCV 1021
>gi|253991584|ref|YP_003042940.1| ATP-dependent DNA helicase [Photorhabdus asymbiotica]
gi|211638462|emb|CAR67084.1| atp-dependent dna helicase recq (ec 3.6.1.-) [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253783034|emb|CAQ86199.1| ATP-dependent DNA helicase [Photorhabdus asymbiotica]
Length = 608
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q Q + +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQQVINTILEGRDCLVIMPTGGGKSLCYQIPALIQEGVTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L G+ A LNS Q Q V++ RQG+V
Sbjct: 81 QVDQLQAN-GVAADCLNSTQAREQQIDVIRRCRQGMV----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER++ + ++L+ Q A VDEAH
Sbjct: 117 --KLLYIAPERLMMDNFLEQLLEW-------------------------QPAILAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|293393904|ref|ZP_06638211.1| ATP-dependent helicase RecQ [Serratia odorifera DSM 4582]
gi|291423731|gb|EFE96953.1| ATP-dependent helicase RecQ [Serratia odorifera DSM 4582]
Length = 614
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 73/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A++ QDC V++PTGGGKSLCYQ D
Sbjct: 25 FGYQQFRPGQQTIINAAINGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 84
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A NS QT Q V+ R+G V
Sbjct: 85 QVDQL-LAYGVSAACYNSTQTREQQLEVMAGCRRGDV----------------------- 120
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER++ + SF ++L CQ L VDEAH
Sbjct: 121 --KLLYIAPERLMMD-SFLDLLD----------------------HCQPAL--LAVDEAH 153
Query: 380 CV 381
C+
Sbjct: 154 CI 155
>gi|258574619|ref|XP_002541491.1| hypothetical protein UREG_01007 [Uncinocarpus reesii 1704]
gi|237901757|gb|EEP76158.1| hypothetical protein UREG_01007 [Uncinocarpus reesii 1704]
Length = 1432
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 31/177 (17%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI 270
D++ A +F R FRP Q +A A++ +D FVL+PTGGGKSLCYQ ++ G+
Sbjct: 610 DVKAALRDVFKLRGFRPNQLEAINATLNGKDAFVLMPTGGGKSLCYQLPSVVQSGRTRGV 669
Query: 271 PATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCA--SRKDKPSC----KLL 324
+S +++LR L + H+ L C + KP ++L
Sbjct: 670 TVVI---SPLLSLMDDQVEQLR-SLSIKAHFINGSLSAADRCEILAYLHKPRVEDYLQIL 725
Query: 325 YVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
YVTPE + ++ L+ LHR ++ A V+DEAHCV
Sbjct: 726 YVTPEMVNKSRVMLGALRQLHRA--------------------KKFARLVIDEAHCV 762
>gi|148678692|gb|EDL10639.1| RecQ protein-like, isoform CRA_c [Mus musculus]
Length = 662
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 65/182 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F + FRPLQ + ++A++D F+++PTGGGKSLCYQ
Sbjct: 100 VFKLQKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLME 159
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + GI AT LN+ + V E+
Sbjct: 160 DQLMVLK-QLGISATMLNASSSKEHVKWVHAEMVN-----------------------KN 195
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YVTPE+I ++ F L+ + G +L G VDE
Sbjct: 196 SQLKLIYVTPEKIAKSKMFMSRLEKAYEAG--------------------RLTGAAVDEV 235
Query: 379 HC 380
HC
Sbjct: 236 HC 237
>gi|302689945|ref|XP_003034652.1| hypothetical protein SCHCODRAFT_15081 [Schizophyllum commune H4-8]
gi|300108347|gb|EFI99749.1| hypothetical protein SCHCODRAFT_15081 [Schizophyllum commune H4-8]
Length = 702
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 73/184 (39%), Gaps = 67/184 (36%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
IFG +FR Q +A +A+V QD FVL PTG GKSLC+Q
Sbjct: 71 IFGYPSFRGKQKEAVEAAVQGQDVFVLAPTGMGKSLCFQVPAVAAAHGVTLVVSPLLALM 130
Query: 259 -DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD 317
+Q+ L+ K G+ L S+ S AV+ +LR
Sbjct: 131 KNQVEALDAK-GVHVASLTSETLKSVKNAVINDLRSA----------------------- 166
Query: 318 KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDE 377
+P +LLYV+PER F +L+ LH G L VVDE
Sbjct: 167 RPKTRLLYVSPERFC-TADFQAILEGLHDNG--------------------MLNRLVVDE 205
Query: 378 AHCV 381
AHC+
Sbjct: 206 AHCI 209
>gi|270157372|ref|ZP_06186029.1| ATP-dependent DNA helicase RecQ [Legionella longbeachae D-4968]
gi|289164234|ref|YP_003454372.1| ATP-dependent DNA helicase [Legionella longbeachae NSW150]
gi|269989397|gb|EEZ95651.1| ATP-dependent DNA helicase RecQ [Legionella longbeachae D-4968]
gi|288857407|emb|CBJ11235.1| ATP-dependent DNA helicase [Legionella longbeachae NSW150]
Length = 604
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 71/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q K +A D VL+PTGGGKSLCYQ D
Sbjct: 20 FGFDSFRPPQEDIIKDVIAGNDVLVLMPTGGGKSLCYQIPALIRPGVGIVVSPLIALMED 79
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L+ GI A + NS T +A VL +L G
Sbjct: 80 QVTALRLQ-GIRAAYYNSSLTSIEAKNVLIQLHHG------------------------- 113
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
LLY+ PER++ N SF + LK C +A F +DEAH
Sbjct: 114 ELDLLYIAPERLI-NISFLDRLK----------------------EC--NIALFAIDEAH 148
Query: 380 CV 381
C+
Sbjct: 149 CI 150
>gi|242022338|ref|XP_002431597.1| ATP-dependent DNA helicase Q1, putative [Pediculus humanus
corporis]
gi|212516905|gb|EEB18859.1| ATP-dependent DNA helicase Q1, putative [Pediculus humanus
corporis]
Length = 652
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 21/169 (12%)
Query: 203 SFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---- 258
+F Q +D++ N F FRP Q + A+++K+D +++PTGGGKSLCYQ
Sbjct: 63 TFPWSQKVDNLLKEN---FKISEFRPFQLEVINATLSKEDVILIMPTGGGKSLCYQLPAL 119
Query: 259 -DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD 317
D+ ITL + P L Q ++ L+++ ++ + + ++T A +
Sbjct: 120 VDKGITLVVS---PLVSLMEDQVMA-----LKKINYPALMLSANSSKEDVKLVTAALQDS 171
Query: 318 KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
P KL+YVTPE++ ++ F L+ H++G R L D V H C
Sbjct: 172 CPKHKLIYVTPEKLAKSKRFMSQLQKCHQQG--RFTRLAIDEV---HCC 215
>gi|119476327|ref|ZP_01616678.1| ATP-dependent DNA helicase RecQ [marine gamma proteobacterium
HTCC2143]
gi|119450191|gb|EAW31426.1| ATP-dependent DNA helicase RecQ [marine gamma proteobacterium
HTCC2143]
Length = 610
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 72/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
IFG +FR Q + + VA D VL+PTGGGKS+CY Q
Sbjct: 17 IFGYPSFRGHQEEIIDSIVAGNDALVLMPTGGGKSMCYQIPALVRDGVGIIISPLIALMQ 76
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ + + G+ A FLNS TV + V Q+L+ G
Sbjct: 77 DQVDAMQ-QLGVHAAFLNSTLTVMEQRRVEQQLQDG------------------------ 111
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER++ +F + +C ++A F +DEA
Sbjct: 112 -QLDLLYVAPERLLQQNTFQLLSQC-------------------------EIALFAIDEA 145
Query: 379 HCV 381
HCV
Sbjct: 146 HCV 148
>gi|347829887|emb|CCD45584.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1775
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 111/273 (40%), Gaps = 83/273 (30%)
Query: 143 DAILNLS-SCPDGRSQIFTPSSVKHSSKSVDCKSGVSTSSASSVSNKKRSSLISDNEHGT 201
+AIL+L+ G S F PSS K SS + + S SS KR SL SD
Sbjct: 825 EAILDLTHQVEQGNS--FKPSSTK-SSLNASFRDASRDPSRSS----KRGSLKSDKPKDM 877
Query: 202 LSFEELQALD--------DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGK 253
S + D D++ A F + FR Q +A A++A +D F+L+PTGGGK
Sbjct: 878 YSVVDSSRTDMYSHAWSNDVKKALKDRFRLKGFRHNQLEAINATLAGRDAFILMPTGGGK 937
Query: 254 SLCYQ-------------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVL 288
SLCYQ DQ+ L+ K I A NS+ T
Sbjct: 938 SLCYQLPAIVQSGKTKGVTIVVSPLLALMHDQVDHLH-KLRIQAYLFNSEST-------- 988
Query: 289 QELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKG 348
QE RQ QL L RK + +LLYVTPE I + + L L+ K
Sbjct: 989 QETRQ-----------QLFNGLN--ERKPEQFVELLYVTPEMINKSNAIQSKLDDLYAK- 1034
Query: 349 SIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
++LA V+DEAHCV
Sbjct: 1035 -------------------KRLARIVIDEAHCV 1048
>gi|367043916|ref|XP_003652338.1| hypothetical protein THITE_2113711 [Thielavia terrestris NRRL 8126]
gi|346999600|gb|AEO66002.1| hypothetical protein THITE_2113711 [Thielavia terrestris NRRL 8126]
Length = 1637
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 35/170 (20%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIP------AT 273
F FR Q +A A++A +D FVL+PTGGGKSLCYQ ++ GI +
Sbjct: 701 FRMTGFRHNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAMVNSGKTRGITLVISPLLS 760
Query: 274 FLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS--CKLLYVTPERI 331
+N Q + +L G + S+ + ++ V R++ P +LLY TPE +
Sbjct: 761 LMNDQVAHLKRLNILATSFNGSINSE--LRNHILSVF----REENPEHFIQLLYATPEML 814
Query: 332 VGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ +F + ++ L+RK ++LA V+DEAHCV
Sbjct: 815 TSSPAFRKGIETLYRK--------------------KKLARIVIDEAHCV 844
>gi|449446630|ref|XP_004141074.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Cucumis
sativus]
gi|449488107|ref|XP_004157941.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Cucumis
sativus]
Length = 729
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 66/182 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG+ FR Q + +A ++ +DCF L+PTGGGKS+CYQ +
Sbjct: 32 FGHSEFRGKQLETIEAVLSGKDCFCLMPTGGGKSVCYQIPALASNGMVLVVCPLIALMEN 91
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L K GI A +L+S Q+ + ++L KP
Sbjct: 92 QVMALKEK-GISAEYLSSTQSTQAKNKIHEDLNSS-----------------------KP 127
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ +LLYVTPE I + ++++K ++ +G + L +DEAH
Sbjct: 128 TLRLLYVTPELIATSGFMAKLMK-IYSRGLLNL--------------------IAIDEAH 166
Query: 380 CV 381
C+
Sbjct: 167 CI 168
>gi|389625891|ref|XP_003710599.1| RecQ helicase MUSN [Magnaporthe oryzae 70-15]
gi|351650128|gb|EHA57987.1| RecQ helicase MUSN [Magnaporthe oryzae 70-15]
Length = 1780
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 80/175 (45%), Gaps = 45/175 (25%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQ- 279
F FR Q +A A+++ +D FVL+PTGGGKSLCYQ +PA N
Sbjct: 868 FRMSGFRHNQLEAINATLSGKDAFVLMPTGGGKSLCYQ-----------LPAVVNNGATR 916
Query: 280 ----TVSQAAAVLQE----LRQGLVLSQHYF-----LHQLIFVLTCASRKDKPSCKLLYV 326
VS +++Q+ LR + + + H+ + + ++ + KLLYV
Sbjct: 917 GITIVVSPLLSLMQDQVDHLRDINIQAAQFSGDIDKTHKNMILDALNNKNPENFLKLLYV 976
Query: 327 TPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
TPE I + +F+ L+ +R ++LA FV+DEAHCV
Sbjct: 977 TPEMISKSVTFTNALQRTYR--------------------NKKLARFVIDEAHCV 1011
>gi|440712393|ref|ZP_20893014.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Rhodopirellula baltica SWK14]
gi|436442914|gb|ELP36007.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Rhodopirellula baltica SWK14]
Length = 745
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 81/195 (41%), Gaps = 75/195 (38%)
Query: 211 DDMEFANVV---IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------- 258
D+M+ A+ V ++G +FRPLQ A + + +D V+LPTGGGKSLCYQ
Sbjct: 19 DEMDRAHSVLRSVWGYDSFRPLQADAVQDVIQGRDSLVVLPTGGGKSLCYQVPALVRDGM 78
Query: 259 ------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
DQ+ L G+ A +NS Q+V Q + LR+G +
Sbjct: 79 SVVVSPLISLMKDQVDALTSN-GVSAALVNSTQSVEQKRETAERLRRGEI---------- 127
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
K+LY+ PER++ ++ + L+ L
Sbjct: 128 ---------------KILYLAPERLLTPKTL-DFLRSL---------------------- 149
Query: 367 QRQLAGFVVDEAHCV 381
++ F +DEAHCV
Sbjct: 150 --PISFFAIDEAHCV 162
>gi|159465525|ref|XP_001690973.1| hypothetical protein CHLREDRAFT_128016 [Chlamydomonas reinhardtii]
gi|158279659|gb|EDP05419.1| predicted protein [Chlamydomonas reinhardtii]
Length = 489
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 29/164 (17%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-PATFLNS 277
+FG +RPLQ + AS+ +D LLP+GGGKSLCYQ ++ L + P L
Sbjct: 8 VFGLHDYRPLQREVMNASMQGRDVLCLLPSGGGKSLCYQLPALLRPGLTLVVSPLLALIQ 67
Query: 278 QQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSF 337
Q +S A + G L+ L V SR D+ KLLYVTPE+IV ++ F
Sbjct: 68 DQVLSLRALSI----DGACLTS---LSSKEDVADVYSRMDRGQLKLLYVTPEKIVSSKRF 120
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L+ H+ G +L +DEAHC
Sbjct: 121 MSKLEKAHQAG--------------------RLDRIAIDEAHCA 144
>gi|440468642|gb|ELQ37793.1| RecQ helicase MUSN [Magnaporthe oryzae Y34]
gi|440478855|gb|ELQ59654.1| RecQ helicase MUSN [Magnaporthe oryzae P131]
Length = 1780
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 80/175 (45%), Gaps = 45/175 (25%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQ- 279
F FR Q +A A+++ +D FVL+PTGGGKSLCYQ +PA N
Sbjct: 868 FRMSGFRHNQLEAINATLSGKDAFVLMPTGGGKSLCYQ-----------LPAVVNNGATR 916
Query: 280 ----TVSQAAAVLQE----LRQGLVLSQHYF-----LHQLIFVLTCASRKDKPSCKLLYV 326
VS +++Q+ LR + + + H+ + + ++ + KLLYV
Sbjct: 917 GITIVVSPLLSLMQDQVDHLRDINIQAAQFSGDIDKTHKNMILDALNNKNPENFLKLLYV 976
Query: 327 TPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
TPE I + +F+ L+ +R ++LA FV+DEAHCV
Sbjct: 977 TPEMISKSVTFTNALQRTYR--------------------NKKLARFVIDEAHCV 1011
>gi|225560535|gb|EEH08816.1| DNA helicase [Ajellomyces capsulatus G186AR]
Length = 572
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 66/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++F +FG +AFRPLQ + +A++ D F+ T GKSLC+Q
Sbjct: 12 DIDFTLRRVFGKKAFRPLQREVIEAAIEGHDVFLQAATSFGKSLCFQLPAIVGHGVTVVV 71
Query: 259 --------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
DQ+ L GIP +NS ++++ ++++L LS H
Sbjct: 72 SPLLALMVDQVSALEAN-GIPVATINSTTSLTKRREIVKDL-----LSGH---------- 115
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE SF L+ +H +G +L
Sbjct: 116 --------PITRLLYVTPE-FCQTDSFRRHLQTVHLQG--------------------EL 146
Query: 371 AGFVVDEAHCV 381
A +DEAHCV
Sbjct: 147 ARIAIDEAHCV 157
>gi|172059335|ref|YP_001806987.1| ATP-dependent DNA helicase RecQ [Burkholderia ambifaria MC40-6]
gi|171991852|gb|ACB62771.1| ATP-dependent DNA helicase RecQ [Burkholderia ambifaria MC40-6]
Length = 615
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR+G +
Sbjct: 71 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + F E+L+ + ++ F
Sbjct: 112 -------DLLYVAPERLMTGR-FLELLE------------------------RARIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|390941990|ref|YP_006405751.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
gi|390415418|gb|AFL82996.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
Length = 711
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 75/184 (40%), Gaps = 72/184 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
FG FR Q Q ++ ++K+D VL+PTGGGKS+CYQ
Sbjct: 17 FFGYSEFRGNQKQIIQSVLSKKDTIVLMPTGGGKSVCYQVPAMIFDGLTLVISPLISLMK 76
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ LN GIPA FLNS Q+ S+ + +++ G +
Sbjct: 77 DQVDALNAN-GIPAAFLNSSQSQSEQRFISSQIQSGKI---------------------- 113
Query: 319 PSCKLLYVTPERIV-GNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDE 377
KLLY+ PER+ G+ + LK ++ L+ +DE
Sbjct: 114 ---KLLYIAPERLYRGDYPLIDFLKTVN------------------------LSLVAIDE 146
Query: 378 AHCV 381
AHCV
Sbjct: 147 AHCV 150
>gi|198465617|ref|XP_001353701.2| GA18497 [Drosophila pseudoobscura pseudoobscura]
gi|198150241|gb|EAL29434.2| GA18497 [Drosophila pseudoobscura pseudoobscura]
Length = 1034
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 79/185 (42%), Gaps = 69/185 (37%)
Query: 221 FGNRAFR-PLQHQACKASVAK-QDCFVLLPTGGGKSLCYQ-------------------- 258
FG+ F+ LQ +A K +V K QD +V +PTG GKSLC+Q
Sbjct: 15 FGHSKFKSELQEKAIKCAVKKKQDVYVSMPTGSGKSLCFQLPGLMCENQLTIVFSPLLAL 74
Query: 259 --DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRK 316
DQI L K +PA LNS+ T+ + V+ +LR
Sbjct: 75 IKDQIDHLT-KLKVPADSLNSKMTLKERDRVIMDLRAV---------------------- 111
Query: 317 DKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
K + K LY+TPE+ + F E+L+ LH+ ++LA F VD
Sbjct: 112 -KTNLKFLYITPEQ-AATKFFQELLQTLHK--------------------HKKLAYFAVD 149
Query: 377 EAHCV 381
EAHCV
Sbjct: 150 EAHCV 154
>gi|373849778|ref|ZP_09592579.1| ATP-dependent DNA helicase RecQ [Opitutaceae bacterium TAV5]
gi|372475943|gb|EHP35952.1| ATP-dependent DNA helicase RecQ [Opitutaceae bacterium TAV5]
Length = 620
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRPLQ + +AS+A +D F LLPTGGGKS+C+Q D
Sbjct: 12 FGYSGFRPLQREIIEASLAGRDVFALLPTGGGKSMCFQLPALHRTGLTVVVSPLIALMKD 71
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L G+ AT+LNS T +A + L L +
Sbjct: 72 QVDQLQAA-GVAATYLNSSLTSGEARSRLAGLH-------------------------RS 105
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLYV PER++ + ++ E L+ + +A +DEAH
Sbjct: 106 EWRLLYVAPERLMLD-NWQENLRAWN------------------------VAALAIDEAH 140
Query: 380 CV 381
C+
Sbjct: 141 CI 142
>gi|338211691|ref|YP_004655744.1| ATP-dependent DNA helicase RecQ [Runella slithyformis DSM 19594]
gi|336305510|gb|AEI48612.1| ATP-dependent DNA helicase RecQ [Runella slithyformis DSM 19594]
Length = 715
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRPLQ + A DC VL+PTGGGKS+CYQ D
Sbjct: 13 FGYETFRPLQAEIIDWIAAGNDCMVLMPTGGGKSVCYQVPALMKEGITLVISPLIALMKD 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GI A FLNS Q+ S+ A+ ++ G
Sbjct: 73 QVQALRAN-GIEAAFLNSTQSASEQYAIEKQCHSG------------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PE++ S V R +I L F VDE+H
Sbjct: 107 ELKLLYIAPEKLFAAGSLDFV-----RSLNINL--------------------FAVDESH 141
Query: 380 CV 381
CV
Sbjct: 142 CV 143
>gi|195172475|ref|XP_002027023.1| GL20982 [Drosophila persimilis]
gi|194112795|gb|EDW34838.1| GL20982 [Drosophila persimilis]
Length = 1017
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 79/185 (42%), Gaps = 69/185 (37%)
Query: 221 FGNRAFR-PLQHQACKASVAK-QDCFVLLPTGGGKSLCYQ-------------------- 258
FG+ F+ LQ +A K +V K QD +V +PTG GKSLC+Q
Sbjct: 15 FGHSKFKSELQEKAIKCAVKKKQDVYVSMPTGSGKSLCFQLPGLMCENQLTIVFSPLLAL 74
Query: 259 --DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRK 316
DQI L K +PA LNS+ T+ + V+ +LR
Sbjct: 75 IKDQIDHLT-KLKVPADSLNSKMTLKERDRVIMDLRAV---------------------- 111
Query: 317 DKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
K + K LY+TPE+ + F E+L+ LH+ ++LA F VD
Sbjct: 112 -KTNLKFLYITPEQ-AATKFFQELLQTLHK--------------------HKKLAYFAVD 149
Query: 377 EAHCV 381
EAHCV
Sbjct: 150 EAHCV 154
>gi|107024309|ref|YP_622636.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia AU 1054]
gi|116688366|ref|YP_833989.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia HI2424]
gi|170731676|ref|YP_001763623.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia MC0-3]
gi|254246602|ref|ZP_04939923.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia PC184]
gi|105894498|gb|ABF77663.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia AU 1054]
gi|116646455|gb|ABK07096.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia HI2424]
gi|124871378|gb|EAY63094.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia PC184]
gi|169814918|gb|ACA89501.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia MC0-3]
Length = 615
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR+G +
Sbjct: 71 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + F E+L+ + ++ F
Sbjct: 112 -------DLLYVAPERLMTGR-FLELLE------------------------RAKIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|421868326|ref|ZP_16299976.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia H111]
gi|444370507|ref|ZP_21170158.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia
K56-2Valvano]
gi|358071686|emb|CCE50854.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia H111]
gi|443597336|gb|ELT65770.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia
K56-2Valvano]
Length = 615
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR+G +
Sbjct: 71 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + F E+L+ + ++ F
Sbjct: 112 -------DLLYVAPERLMTGR-FLELLE------------------------RAKIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|307132960|ref|YP_003884976.1| ATP-dependent DNA helicase [Dickeya dadantii 3937]
gi|306530489|gb|ADN00420.1| ATP-dependent DNA helicase [Dickeya dadantii 3937]
Length = 614
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 56/132 (42%), Gaps = 47/132 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A+V+ +DC V++PTGGGKSLCYQ D
Sbjct: 26 FGYQQFRPGQQAIINAAVSGRDCLVIMPTGGGKSLCYQIPALVLEGLTLVVSPLISLMKD 85
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L +G+ A LNS QT Q AV R+G
Sbjct: 86 QVDQLQ-AYGVAAACLNSTQTREQQQAVFSACRRG------------------------- 119
Query: 320 SCKLLYVTPERI 331
KLLY+ PER+
Sbjct: 120 ELKLLYIAPERL 131
>gi|115350316|ref|YP_772155.1| ATP-dependent DNA helicase RecQ [Burkholderia ambifaria AMMD]
gi|115280304|gb|ABI85821.1| ATP-dependent DNA helicase RecQ [Burkholderia ambifaria AMMD]
Length = 615
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR+G +
Sbjct: 71 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + F E+L+ + ++ F
Sbjct: 112 -------DLLYVAPERLMTGR-FLELLE------------------------RARIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|32474001|ref|NP_866995.1| ATP-dependent DNA helicase RecQ [Rhodopirellula baltica SH 1]
gi|32444538|emb|CAD74537.1| ATP-dependent DNA helicase RecQ [Rhodopirellula baltica SH 1]
Length = 749
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 81/195 (41%), Gaps = 75/195 (38%)
Query: 211 DDMEFANVV---IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------- 258
D+M+ A+ V ++G +FRPLQ A + + +D V+LPTGGGKSLCYQ
Sbjct: 23 DEMDRAHSVLRSVWGYDSFRPLQADAVQDVIQGRDSLVVLPTGGGKSLCYQVPALVRDGM 82
Query: 259 ------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
DQ+ L G+ A +NS Q+V Q + LR+G +
Sbjct: 83 SVVVSPLISLMKDQVDALTSN-GVSAALVNSTQSVEQKRETAERLRRGEI---------- 131
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
K+LY+ PER++ ++ + L+ L
Sbjct: 132 ---------------KILYLAPERLLTPKTL-DFLRSL---------------------- 153
Query: 367 QRQLAGFVVDEAHCV 381
++ F +DEAHCV
Sbjct: 154 --PISFFAIDEAHCV 166
>gi|358638633|dbj|BAL25930.1| ATP-dependent DNA helicase protein [Azoarcus sp. KH32C]
Length = 609
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 72/183 (39%), Gaps = 68/183 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG AFR Q A D VL+PTGGGKSLCY Q
Sbjct: 19 VFGYTAFRGEQEAIVTHVGAGGDALVLMPTGGGKSLCYQVPALLRSGTAVVVSPLIALMQ 78
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A +LNS Q ++AAV ++L +G
Sbjct: 79 DQVSALQ-EAGVAAAYLNSSQAQDESAAVERDLIEG------------------------ 113
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER++ + L LHR R++A F +DEA
Sbjct: 114 -RLDLLYVAPERLLTARLLG-TLDRLHR--------------------DRRIALFAIDEA 151
Query: 379 HCV 381
HCV
Sbjct: 152 HCV 154
>gi|240280098|gb|EER43602.1| DNA helicase [Ajellomyces capsulatus H143]
Length = 572
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 66/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++F +FG +AFRPLQ + +A++ D F+ T GKSLC+Q
Sbjct: 12 DIDFTLRRVFGKKAFRPLQREVIEAAIEGHDVFLQAATSFGKSLCFQLPAIVGHGVTVVV 71
Query: 259 --------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
DQ+ L GIP +NS ++++ ++++L LS H
Sbjct: 72 SPLLALMVDQVSALEAN-GIPVATINSTTSLTKRREIVKDL-----LSGH---------- 115
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE SF L+ +H +G +L
Sbjct: 116 --------PITRLLYVTPE-FCQTDSFRRHLQTVHLQG--------------------EL 146
Query: 371 AGFVVDEAHCV 381
A +DEAHCV
Sbjct: 147 ARIAIDEAHCV 157
>gi|206558635|ref|YP_002229395.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia J2315]
gi|444357342|ref|ZP_21158885.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia BC7]
gi|198034672|emb|CAR50539.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia J2315]
gi|443606451|gb|ELT74231.1| ATP-dependent DNA helicase RecQ [Burkholderia cenocepacia BC7]
Length = 615
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR+G +
Sbjct: 71 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + F E+L+ + ++ F
Sbjct: 112 -------DLLYVAPERLMTGR-FLELLE------------------------RAKIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|328864030|gb|EGG13129.1| hypothetical protein MELLADRAFT_46354 [Melampsora larici-populina
98AG31]
Length = 498
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI 270
D+ A IF +A+R Q A A+++ + CFVL+PTGGGKSLCYQ ++ G+
Sbjct: 8 DVAKALTKIFKLKAWRRNQLDAINATLSGEHCFVLMPTGGGKSLCYQLPAVVRSGKTHGV 67
Query: 271 PATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPER 330
++ L E G Q +T R PS LLYVTPE
Sbjct: 68 TIVVSPLLSLITDQIQSLCEKEIGAAPWTGTMSKQEKAAVTSDLRSKDPSLCLLYVTPES 127
Query: 331 IVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
++ + +LK L ++ I A FV+DEAHC+
Sbjct: 128 MMQSGELKGILKDLQKRSLI--------------------ARFVIDEAHCL 158
>gi|337277744|ref|YP_004617215.1| ATP-dependent DNA helicase [Ramlibacter tataouinensis TTB310]
gi|334728820|gb|AEG91196.1| Candidate ATP-dependent DNA helicase [Ramlibacter tataouinensis
TTB310]
Length = 621
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 72/187 (38%), Gaps = 72/187 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR Q + +A D VL+PTGGGKSLCYQ
Sbjct: 11 VFGYEQFRGPQAAIVEHVIAGGDALVLMPTGGGKSLCYQVPAIARQRAGHGITVVVSPLI 70
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L+ + G+ A FLNS + +AA V + L +G V
Sbjct: 71 ALMHDQVGALH-EAGVEAAFLNSTLSGEEAAGVEKRLLRGEV------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLY PER+ F L LH++G QLA F
Sbjct: 112 -------TLLYAAPERVT-TPRFLAQLDSLHQRG--------------------QLALFA 143
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 144 IDEAHCV 150
>gi|435850506|ref|YP_007312092.1| ATP-dependent DNA helicase RecQ [Methanomethylovorans hollandica
DSM 15978]
gi|433661136|gb|AGB48562.1| ATP-dependent DNA helicase RecQ [Methanomethylovorans hollandica
DSM 15978]
Length = 692
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 56/131 (42%), Gaps = 47/131 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRPLQ K +A +D FVL+PTGGGKS+CYQ D
Sbjct: 9 FGYDTFRPLQEDIIKDVIAGKDVFVLMPTGGGKSICYQLPALLMNGVTVVVSPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL G+ A +LNS + ++ + QEL ++
Sbjct: 69 QVDTLRAN-GVEAAYLNSTLSYKESNQIKQELENNII----------------------- 104
Query: 320 SCKLLYVTPER 330
KLLYV PER
Sbjct: 105 --KLLYVAPER 113
>gi|71021179|ref|XP_760820.1| hypothetical protein UM04673.1 [Ustilago maydis 521]
gi|46100194|gb|EAK85427.1| hypothetical protein UM04673.1 [Ustilago maydis 521]
Length = 748
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 53/194 (27%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------ 258
DD+ A + +FG +FR Q A++ ++ V++PTGGGKSLCYQ
Sbjct: 112 DDVRLAALSVFGIPSFRFCQLGVINAALDGRNAVVVMPTGGGKSLCYQLPAILRRGVTLV 171
Query: 259 ---------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
DQ++ L + GI + L S ++ A+L+++R G I
Sbjct: 172 VSPLISLMTDQVLHLQ-QVGIQSELLCSTTPRERSNAILKQIRLGTTSE--------IEQ 222
Query: 310 LTCASRKD---KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
TC+S + KLLYVTPERI +++ L+ +
Sbjct: 223 ATCSSGWNYHQNDGIKLLYVTPERIAKSKTCLSALQSAYE-------------------- 262
Query: 367 QRQLAGFVVDEAHC 380
Q +L+ V+DEAHC
Sbjct: 263 QARLSRIVIDEAHC 276
>gi|325088818|gb|EGC42128.1| DNA helicase [Ajellomyces capsulatus H88]
Length = 572
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 66/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++F +FG +AFRPLQ + +A++ D F+ T GKSLC+Q
Sbjct: 12 DIDFTLRRVFGKKAFRPLQREVIEAAIEGHDVFLQAATSFGKSLCFQLPAIVGHGVTVVV 71
Query: 259 --------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
DQ+ L GIP +NS ++++ ++++L LS H
Sbjct: 72 SPLLALMVDQVSALEAN-GIPVATINSTTSLTKRREIVKDL-----LSGH---------- 115
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE SF L+ +H +G +L
Sbjct: 116 --------PITRLLYVTPE-FCQTDSFRRHLQTVHLQG--------------------EL 146
Query: 371 AGFVVDEAHCV 381
A +DEAHCV
Sbjct: 147 ARIAIDEAHCV 157
>gi|161523423|ref|YP_001578435.1| ATP-dependent DNA helicase RecQ [Burkholderia multivorans ATCC
17616]
gi|189351804|ref|YP_001947432.1| ATP-dependent DNA helicase [Burkholderia multivorans ATCC 17616]
gi|160340852|gb|ABX13938.1| ATP-dependent DNA helicase RecQ [Burkholderia multivorans ATCC
17616]
gi|189335826|dbj|BAG44896.1| ATP-dependent DNA helicase [Burkholderia multivorans ATCC 17616]
Length = 615
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYSAFRGQQGEIVEHVASGGDCLVLMPTGGGKSLCYQIPALMRREAGHGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++AAA + LR+G +
Sbjct: 71 ALMQDQVAALR-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + F E+L+ + ++ F
Sbjct: 112 -------DLLYVAPERLMTGR-FLELLE------------------------RAKIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|154278603|ref|XP_001540115.1| hypothetical protein HCAG_05582 [Ajellomyces capsulatus NAm1]
gi|150413700|gb|EDN09083.1| hypothetical protein HCAG_05582 [Ajellomyces capsulatus NAm1]
Length = 572
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 66/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++F +FG +AFRPLQ + +A++ D F+ T GKSLC+Q
Sbjct: 12 DIDFTLRRVFGKKAFRPLQREVIEAAIEGHDVFLQAATSFGKSLCFQLPAIVGHGVTVVV 71
Query: 259 --------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
DQ+ L GIP +NS ++++ ++++L LS H
Sbjct: 72 SPLLALMVDQVSALEAN-GIPVATINSTTSLTKRREIVKDL-----LSGH---------- 115
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE SF L+ +H +G +L
Sbjct: 116 --------PITRLLYVTPE-FCQTDSFRRHLQTVHLQG--------------------EL 146
Query: 371 AGFVVDEAHCV 381
A +DEAHCV
Sbjct: 147 ARIAIDEAHCV 157
>gi|443322394|ref|ZP_21051417.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 73106]
gi|442787869|gb|ELR97579.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 73106]
Length = 701
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 78/193 (40%), Gaps = 68/193 (35%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------ 257
+ D++ A FG+ FRPLQ Q + +D V++PTGGGKSLCY
Sbjct: 1 MQDLKSALKRFFGHDVFRPLQEQIIAEVLNNRDLLVIMPTGGGKSLCYQLPALLKPGLTL 60
Query: 258 ---------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
QDQ+ L + GI ATFLNS + + +E+ QG
Sbjct: 61 VVSPLISLMQDQVNALKDR-GIGATFLNSSLNSQEIQSRSREILQG-------------- 105
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
+ KLLYV PER++ ++ FS L + + I
Sbjct: 106 -----------NIKLLYVAPERLL-SEGFSVFLTQIQQDVGI------------------ 135
Query: 369 QLAGFVVDEAHCV 381
+ +DEAHCV
Sbjct: 136 --SALAIDEAHCV 146
>gi|365987708|ref|XP_003670685.1| hypothetical protein NDAI_0F01230 [Naumovozyma dairenensis CBS 421]
gi|343769456|emb|CCD25442.1| hypothetical protein NDAI_0F01230 [Naumovozyma dairenensis CBS 421]
Length = 1110
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 71/213 (33%)
Query: 194 ISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGK 253
I++ ++ EE + +++ + F FRP Q +A +++ +D FVL+PTGGGK
Sbjct: 443 IAETRTANVNEEEYRWTEEVYYRLRHTFKLPGFRPNQLEAINSTLIGKDVFVLMPTGGGK 502
Query: 254 SLCY-------------------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVL 288
SLCY QDQ+ L L I A+ ++S+ T Q
Sbjct: 503 SLCYQLPAIVKSGKTKGTSIVISPLISLMQDQVEHL-LDLNIKASMISSKGTTQQRKQTF 561
Query: 289 QELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKG 348
QG L+Y++PE I ++ V+K L+++G
Sbjct: 562 SLFSQG-------------------------KLDLIYISPEMIASSKQCKRVIKKLYQEG 596
Query: 349 SIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ LA +VDEAHCV
Sbjct: 597 N--------------------LARIIVDEAHCV 609
>gi|319942147|ref|ZP_08016465.1| ATP-dependent DNA helicase RecQ [Sutterella wadsworthensis 3_1_45B]
gi|319804357|gb|EFW01241.1| ATP-dependent DNA helicase RecQ [Sutterella wadsworthensis 3_1_45B]
Length = 609
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 74/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG AFR Q + +A V +D VL+PTGGGKSLCY Q
Sbjct: 14 VFGYDAFRGFQEEVVRAVVRGEDVLVLMPTGGGKSLCYQIPALLRDGVAVVVSPLIALMQ 73
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A +LNS T AA V + LR G
Sbjct: 74 DQVDALE-ELGVSAAYLNSTLTPEAAADVRRRLRCG------------------------ 108
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER++ + ++ L ++V +++ F +DEA
Sbjct: 109 -ELDLLYVAPERLLMSS----------------MQALLSEV---------KISLFAIDEA 142
Query: 379 HCV 381
HCV
Sbjct: 143 HCV 145
>gi|171319362|ref|ZP_02908472.1| ATP-dependent DNA helicase RecQ [Burkholderia ambifaria MEX-5]
gi|171095433|gb|EDT40405.1| ATP-dependent DNA helicase RecQ [Burkholderia ambifaria MEX-5]
Length = 644
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 40 VFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQGAGIVVSPLI 99
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR+G +
Sbjct: 100 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 140
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + F E+L+ + ++ F
Sbjct: 141 -------DLLYVAPERLMTGR-FLELLE------------------------RARIGLFA 168
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 169 IDEAHCV 175
>gi|170701422|ref|ZP_02892380.1| ATP-dependent DNA helicase RecQ [Burkholderia ambifaria IOP40-10]
gi|170133674|gb|EDT02044.1| ATP-dependent DNA helicase RecQ [Burkholderia ambifaria IOP40-10]
Length = 652
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 48 VFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQGAGIVVSPLI 107
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR+G +
Sbjct: 108 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 148
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + F E+L+ + ++ F
Sbjct: 149 -------DLLYVAPERLMTGR-FLELLE------------------------RARIGLFA 176
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 177 IDEAHCV 183
>gi|56963874|ref|YP_175605.1| ATP-dependent DNA helicase RecS [Bacillus clausii KSM-K16]
gi|56910117|dbj|BAD64644.1| ATP-dependent DNA helicase RecS [Bacillus clausii KSM-K16]
Length = 697
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 78/193 (40%), Gaps = 72/193 (37%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ----------- 258
+D E ++G AFRP Q + ++ + K+D V++PTGGGKSLCYQ
Sbjct: 1 MDQAEHVLRSLYGYTAFRPGQQKIIESILNKEDALVVMPTGGGKSLCYQIPAAVLEGVTL 60
Query: 259 ----------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
DQ+ +N + GIPAT++NS T ++ L+++ G
Sbjct: 61 VISPLIALMKDQVDAVN-EIGIPATYINSSLTKAEERKRLKDVADG-------------- 105
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
+ LLYV PER+ SF L ++
Sbjct: 106 -----------NISLLYVAPERLY-EPSFQAAL------------------------AKQ 129
Query: 369 QLAGFVVDEAHCV 381
LA +DEAHC+
Sbjct: 130 PLALIAIDEAHCM 142
>gi|342868828|gb|EGU72897.1| hypothetical protein FOXB_16594 [Fusarium oxysporum Fo5176]
Length = 141
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 75/163 (46%), Gaps = 29/163 (17%)
Query: 224 RAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATFLNS 277
+ FR Q +A +++ +D FVL+PTGGGKSLCYQ +I GI P L
Sbjct: 2 KGFRHNQLEAINSTLGGKDAFVLMPTGGGKSLCYQLPAVIRTGKTQGITIVVSPLLSLMQ 61
Query: 278 QQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSF 337
Q A +Q + S Y Q++ L S +D +LLYVTPE + N +F
Sbjct: 62 DQVDHMKALGIQAVAFNGEYSAEY-KRQVMTALEERSPED--YIELLYVTPEMVSKNTTF 118
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
+ ++ L+ KG +LA V+DEAHC
Sbjct: 119 NNGMRTLYDKG--------------------KLARIVIDEAHC 141
>gi|134294437|ref|YP_001118172.1| ATP-dependent DNA helicase RecQ [Burkholderia vietnamiensis G4]
gi|134137594|gb|ABO53337.1| ATP-dependent DNA helicase RecQ [Burkholderia vietnamiensis G4]
Length = 616
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREVGQGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++AAA + LR+G +
Sbjct: 71 ALMQDQVAALR-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + F E+L+ + ++ F
Sbjct: 112 -------DLLYVAPERLMTGR-FLELLE------------------------RARIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|320539379|ref|ZP_08039048.1| ATP-dependent DNA helicase [Serratia symbiotica str. Tucson]
gi|320030504|gb|EFW12514.1| ATP-dependent DNA helicase [Serratia symbiotica str. Tucson]
Length = 618
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A++ QDC V++PTGGGKSLCYQ D
Sbjct: 29 FGYQQFRPGQQAIINAAIEGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 88
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A NS QT Q A + R G +
Sbjct: 89 QVDQL-LAYGVSAACYNSTQTREQQLAAMAGCRSGQI----------------------- 124
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER++ + + +C V+L VDEAH
Sbjct: 125 --KLLYIAPERLMMDSFLDSLGRC--------------PPVIL-----------AVDEAH 157
Query: 380 CV 381
C+
Sbjct: 158 CI 159
>gi|358056819|dbj|GAA97169.1| hypothetical protein E5Q_03845 [Mixia osmundae IAM 14324]
Length = 780
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 75/184 (40%), Gaps = 67/184 (36%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG + +R Q + A++ DC ++ PTG GKSLC+Q
Sbjct: 36 VFGKQDYRGKQEEVITAALQGHDCLLIAPTGMGKSLCFQVPAVAAPHGLTIVVSPLIALM 95
Query: 259 -DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD 317
DQ+ L+ K I A L+S+ QA +L+++ G
Sbjct: 96 DDQLQALD-KLNIAAGSLSSKTDPDQARLILRDMHSG----------------------- 131
Query: 318 KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDE 377
P +LLYVTPERI SF VL+ L+ G +L+ V+DE
Sbjct: 132 HPKTRLLYVTPERI-ALISFQRVLRVLYNHG--------------------ELSRLVIDE 170
Query: 378 AHCV 381
AHC+
Sbjct: 171 AHCI 174
>gi|422302785|ref|ZP_16390144.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
gi|389787941|emb|CCI16794.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
Length = 703
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 78/196 (39%), Gaps = 68/196 (34%)
Query: 207 LQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------- 257
+ A+D +E A FG FRP Q Q +A++ QD V++PTGGGKSLC+
Sbjct: 1 MAAIDSLEKALKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKG 60
Query: 258 ------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQ 305
QDQ+ L GI ATFLNS Q R+ L+L
Sbjct: 61 VTVVVSPLIALMQDQVTAL-ADNGIGATFLNSTLNAKQVRE-----RESLIL-------- 106
Query: 306 LIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
+ KLLYV PER++ + SF + L +
Sbjct: 107 ------------QGKIKLLYVAPERLL-SPSFLDFLAVIDNYLG---------------- 137
Query: 366 CQRQLAGFVVDEAHCV 381
LA VDEAHCV
Sbjct: 138 ----LACLAVDEAHCV 149
>gi|332707801|ref|ZP_08427828.1| ATP-dependent DNA helicase RecQ [Moorea producens 3L]
gi|332353504|gb|EGJ33017.1| ATP-dependent DNA helicase RecQ [Moorea producens 3L]
Length = 709
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 78/194 (40%), Gaps = 76/194 (39%)
Query: 213 MEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-------------- 258
+E A FG+ FRP Q Q + ++ QD +++PTGGGKSLCYQ
Sbjct: 7 LEHALKHFFGHDCFRPGQQQIIEEALQNQDLLIIMPTGGGKSLCYQLPALLKPGLTVVVS 66
Query: 259 -------DQIITLNLKFGIPATFLNS----QQTVSQAAAVLQELRQGLVLSQHYFLHQLI 307
DQ+ +L GI ATF+NS QQ S+ AA+L+
Sbjct: 67 PLISLMQDQVTSLE-DNGIGATFINSTLSFQQMRSREAAILEG----------------- 108
Query: 308 FVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQ 367
KLLYV+PER++ Q + L R S Q
Sbjct: 109 ------------KIKLLYVSPERLLAEQ----FIPFLDRVRS-----------------Q 135
Query: 368 RQLAGFVVDEAHCV 381
+ F +DEAHCV
Sbjct: 136 IGIPTFAIDEAHCV 149
>gi|189462633|ref|ZP_03011418.1| hypothetical protein BACCOP_03325 [Bacteroides coprocola DSM 17136]
gi|189430794|gb|EDU99778.1| ATP-dependent DNA helicase RecQ [Bacteroides coprocola DSM 17136]
Length = 607
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 73/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRPLQ + + K+D VL+PTGGGKS+CYQ D
Sbjct: 10 FGYTQFRPLQEEIITQILHKKDTLVLMPTGGGKSICYQLPALLMEGTAIVVSPLISLMKD 69
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L GI A LNS + A + E RQG V
Sbjct: 70 QVESLQAN-GIIARALNSTNDETTDANIRFECRQGRV----------------------- 105
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PER++G +F L D+ +++ F +DEAH
Sbjct: 106 --KLLYISPERLMGEVNF-----------------LMKDI---------RISLFAIDEAH 137
Query: 380 CV 381
C+
Sbjct: 138 CI 139
>gi|421479201|ref|ZP_15926916.1| ATP-dependent DNA helicase RecQ [Burkholderia multivorans CF2]
gi|400223482|gb|EJO53779.1| ATP-dependent DNA helicase RecQ [Burkholderia multivorans CF2]
Length = 641
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + + DC VL+PTGGGKSLCY
Sbjct: 37 VFGYSAFRGQQGEIVEHVASGGDCLVLMPTGGGKSLCYQIPALMRREAGHGAGIVVSPLI 96
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++AAA + LR+G +
Sbjct: 97 ALMQDQVAALR-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 137
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + F E+L+ + ++ F
Sbjct: 138 -------DLLYVAPERLMTGR-FLELLE------------------------RAKIGLFA 165
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 166 IDEAHCV 172
>gi|334121014|ref|ZP_08495090.1| ATP-dependent DNA helicase RecQ [Microcoleus vaginatus FGP-2]
gi|333455733|gb|EGK84376.1| ATP-dependent DNA helicase RecQ [Microcoleus vaginatus FGP-2]
Length = 731
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 76/186 (40%), Gaps = 76/186 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q + +A++ K+D +++PTGGGKSLC+Q D
Sbjct: 23 FGYDSFRPGQQEIVEAALQKRDMMIVMPTGGGKSLCFQLPALLKPGLTVVVSPLIALMQD 82
Query: 260 QIITLNLKFGIPATFLNS----QQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
Q+ L GI ATFLNS Q+T S+ A+L+
Sbjct: 83 QVEALQDN-GIGATFLNSTLSSQETRSRETAILEG------------------------- 116
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
KLLYV PER++G + F L + K I + F +
Sbjct: 117 ----KIKLLYVAPERLLG-ERFLPFLDIVANKLGI--------------------SAFAI 151
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 152 DEAHCV 157
>gi|428320783|ref|YP_007118665.1| ATP-dependent DNA helicase RecQ [Oscillatoria nigro-viridis PCC
7112]
gi|428244463|gb|AFZ10249.1| ATP-dependent DNA helicase RecQ [Oscillatoria nigro-viridis PCC
7112]
Length = 731
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 76/186 (40%), Gaps = 76/186 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q + +A++ K+D +++PTGGGKSLC+Q D
Sbjct: 23 FGYDSFRPGQQEIVEAALQKRDMMIVMPTGGGKSLCFQLPALLKPGLTVVVSPLIALMQD 82
Query: 260 QIITLNLKFGIPATFLNS----QQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
Q+ L GI ATFLNS Q+T S+ A+L+
Sbjct: 83 QVEALQDN-GIGATFLNSTLSTQETRSRETAILEG------------------------- 116
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
KLLYV PER++G + F L + K I + F +
Sbjct: 117 ----KIKLLYVAPERLLG-ERFLPFLDIVANKLGI--------------------SAFAI 151
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 152 DEAHCV 157
>gi|221201559|ref|ZP_03574597.1| ATP-dependent DNA helicase RecQ [Burkholderia multivorans CGD2M]
gi|221207366|ref|ZP_03580376.1| ATP-dependent DNA helicase RecQ [Burkholderia multivorans CGD2]
gi|421473545|ref|ZP_15921647.1| ATP-dependent DNA helicase RecQ [Burkholderia multivorans ATCC
BAA-247]
gi|221172954|gb|EEE05391.1| ATP-dependent DNA helicase RecQ [Burkholderia multivorans CGD2]
gi|221178375|gb|EEE10784.1| ATP-dependent DNA helicase RecQ [Burkholderia multivorans CGD2M]
gi|400220712|gb|EJO51226.1| ATP-dependent DNA helicase RecQ [Burkholderia multivorans ATCC
BAA-247]
Length = 660
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + + DC VL+PTGGGKSLCY
Sbjct: 56 VFGYSAFRGQQGEIVEHVASGGDCLVLMPTGGGKSLCYQIPALMRREAGHGAGIVVSPLI 115
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++AAA + LR+G +
Sbjct: 116 ALMQDQVAALR-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 156
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + F E+L+ + ++ F
Sbjct: 157 -------DLLYVAPERLMTGR-FLELLE------------------------RAKIGLFA 184
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 185 IDEAHCV 191
>gi|8250142|emb|CAB93500.1| DNA helicase [Emericella nidulans]
Length = 548
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 78/191 (40%), Gaps = 66/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++F +F ++FRPLQ A+V D F+ T GKSLCYQ
Sbjct: 55 DLDFYLHRVFRKKSFRPLQRDVTAAAVEGHDVFLQASTSFGKSLCYQLPAMTTHGVTVVV 114
Query: 259 --------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
DQ+ L G+P +NS ++++ +L++L LS H
Sbjct: 115 CPLLSLMTDQVNALQ-ALGVPVATINSTVSLAERRVILEDL-----LSGH---------- 158
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE + N +F L+ +H+ QR+L
Sbjct: 159 --------PRIRLLYVTPE-LCQNNTFRRNLQTMHK--------------------QRKL 189
Query: 371 AGFVVDEAHCV 381
+DEAHC+
Sbjct: 190 VRIAIDEAHCI 200
>gi|221213504|ref|ZP_03586479.1| ATP-dependent DNA helicase RecQ [Burkholderia multivorans CGD1]
gi|221166956|gb|EED99427.1| ATP-dependent DNA helicase RecQ [Burkholderia multivorans CGD1]
Length = 641
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + + DC VL+PTGGGKSLCY
Sbjct: 37 VFGYSAFRGQQGEIVEHVASGGDCLVLMPTGGGKSLCYQIPALTRREAGHGAGIVVSPLI 96
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++AAA + LR+G +
Sbjct: 97 ALMQDQVAALR-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 137
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + F E+L+ + ++ F
Sbjct: 138 -------DLLYVAPERLMTGR-FLELLE------------------------RAKIGLFA 165
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 166 IDEAHCV 172
>gi|359783323|ref|ZP_09286538.1| ATP-dependent DNA helicase RecQ [Pseudomonas psychrotolerans L19]
gi|359368750|gb|EHK69326.1| ATP-dependent DNA helicase RecQ [Pseudomonas psychrotolerans L19]
Length = 712
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 74/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG AFR Q + + + D VL+PTGGGKSLCYQ
Sbjct: 12 VFGYDAFRGNQARIIERVASGGDALVLMPTGGGKSLCYQVPALLRPGVAVVVSPLIALMD 71
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ TL L+ G+ AT LNS T Q AV +L +G
Sbjct: 72 DQVATL-LELGVSATALNSTMTGEQQRAVAAQLERG------------------------ 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLY+ PER+V + +L L R LP +A F +DEA
Sbjct: 107 -EIKLLYLAPERLVQPR----MLDFLKR---------------LP------IALFAIDEA 140
Query: 379 HCV 381
HCV
Sbjct: 141 HCV 143
>gi|223940604|ref|ZP_03632448.1| ATP-dependent DNA helicase RecQ [bacterium Ellin514]
gi|223890722|gb|EEF57239.1| ATP-dependent DNA helicase RecQ [bacterium Ellin514]
Length = 728
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + ++A +D F LLPTGGGKSLC+Q D
Sbjct: 20 FGFSSFRPLQEEIILDTLAGKDVFALLPTGGGKSLCFQLPALVRPGLTVVISPLIALMKD 79
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L G PATFLNS ++ L+ L +G
Sbjct: 80 QVDALTAS-GAPATFLNSSLEAGESTPRLRGLHKG------------------------- 113
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLYV PER++ S L+ L R+ ++ L F +DEAH
Sbjct: 114 EFRLLYVAPERLM----LSGFLEDL-RRWNVNL--------------------FAIDEAH 148
Query: 380 CV 381
CV
Sbjct: 149 CV 150
>gi|425466065|ref|ZP_18845368.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
gi|389831578|emb|CCI25550.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
Length = 703
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 78/196 (39%), Gaps = 68/196 (34%)
Query: 207 LQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------- 257
+ A+D +E A FG FRP Q Q +A++ QD V++PTGGGKSLC+
Sbjct: 1 MAAIDSLEKALKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKG 60
Query: 258 ------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQ 305
QDQ+ L GI ATFLNS Q R+ L+L
Sbjct: 61 VTVVVSPLIALMQDQVTAL-ADNGIGATFLNSTLNAKQVRE-----RESLIL-------- 106
Query: 306 LIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
+ KLLYV PER++ + SF + L +
Sbjct: 107 ------------QGKIKLLYVAPERLL-SPSFLDFLAVIDNYLG---------------- 137
Query: 366 CQRQLAGFVVDEAHCV 381
LA VDEAHCV
Sbjct: 138 ----LACLAVDEAHCV 149
>gi|387901024|ref|YP_006331363.1| ATP-dependent DNA helicase RecQ [Burkholderia sp. KJ006]
gi|387575916|gb|AFJ84632.1| ATP-dependent DNA helicase RecQ [Burkholderia sp. KJ006]
Length = 635
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 30 VFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREVGQGAGIVVSPLI 89
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++AAA + LR+G +
Sbjct: 90 ALMQDQVAALR-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 130
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + F E+L+ + ++ F
Sbjct: 131 -------DLLYVAPERLMTGR-FLELLE------------------------RARIGLFA 158
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 159 IDEAHCV 165
>gi|299740370|ref|XP_002910312.1| ATP-dependent DNA helicase [Coprinopsis cinerea okayama7#130]
gi|298404212|gb|EFI26818.1| ATP-dependent DNA helicase [Coprinopsis cinerea okayama7#130]
Length = 848
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 84/201 (41%), Gaps = 67/201 (33%)
Query: 209 ALDDMEFANVV------IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---- 258
A D+ +++N + +F FR Q C A++ ++D ++PTGGGKSL YQ
Sbjct: 96 AEDEFDWSNALQSRMKKMFNIDNFRHCQRGVCNANMDRRDIVCVMPTGGGKSLTYQLPAL 155
Query: 259 -----------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHY 301
DQ++ L + GI A L + ++ V+Q LR
Sbjct: 156 LTTGCTIVISPLLALITDQVLHLQ-ELGIAAAMLTGETPSAEKKDVVQRLR--------- 205
Query: 302 FLHQLIFVLTCASRKDKPS-CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVV 360
A+ ++K K +YVTPE++V + SF +L L G
Sbjct: 206 ---------NLANPQNKGEDLKFVYVTPEKLVKDNSFKGLLTKLAAAG------------ 244
Query: 361 VLPHTCQRQLAGFVVDEAHCV 381
+LA FV+DEAHCV
Sbjct: 245 --------RLARFVIDEAHCV 257
>gi|421615254|ref|ZP_16056286.1| ATP-dependent DNA helicase RecQ [Rhodopirellula baltica SH28]
gi|408494014|gb|EKJ98640.1| ATP-dependent DNA helicase RecQ [Rhodopirellula baltica SH28]
Length = 745
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 75/195 (38%)
Query: 211 DDMEFANVV---IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------- 258
D+M+ A+ V ++G +FRPLQ A + + +D V+LPTGGGKSLCYQ
Sbjct: 19 DEMDRAHSVLRSVWGYDSFRPLQADAVQDVIQGRDSLVVLPTGGGKSLCYQVPALVRDGM 78
Query: 259 ------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
DQ+ L G+ A +NS Q+V Q + +R+G +
Sbjct: 79 SVVVSPLISLMKDQVDALTSN-GVSAALVNSTQSVEQKRETAERIRRGEI---------- 127
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
K+LY+ PER++ ++ + L+ L
Sbjct: 128 ---------------KILYLAPERLLTPKTL-DFLRSL---------------------- 149
Query: 367 QRQLAGFVVDEAHCV 381
++ F +DEAHCV
Sbjct: 150 --PISFFAIDEAHCV 162
>gi|428773638|ref|YP_007165426.1| ATP-dependent DNA helicase RecQ [Cyanobacterium stanieri PCC 7202]
gi|428687917|gb|AFZ47777.1| ATP-dependent DNA helicase RecQ [Cyanobacterium stanieri PCC 7202]
Length = 713
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 75/182 (41%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG +FRP Q + + ++A +D V++PTGGGKSLC+ QD
Sbjct: 12 FGYDSFRPGQEKIVQDAIAHKDLLVIMPTGGGKSLCFQLPALLKQGVTIVISPLISLMQD 71
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GI AT+LNS Q ++RQ +L+
Sbjct: 72 QVTALQ-DNGIGATYLNSTLNYEQT-----KIRQRDILA--------------------G 105
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+V + +F L L +K I A F +DEAH
Sbjct: 106 KIKLLYLAPERLVSD-TFQPFLVTLAQKIGI--------------------AAFAIDEAH 144
Query: 380 CV 381
C+
Sbjct: 145 CI 146
>gi|166362830|ref|YP_001655103.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
gi|166085203|dbj|BAF99910.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
Length = 703
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 78/196 (39%), Gaps = 68/196 (34%)
Query: 207 LQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------- 257
+ A+D +E A FG FRP Q Q +A++ QD V++PTGGGKSLC+
Sbjct: 1 MAAIDSLEKALKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKG 60
Query: 258 ------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQ 305
QDQ+ L GI ATFLNS Q R+ L+L
Sbjct: 61 VTVVVSPLIALMQDQVTAL-ADNGIGATFLNSTLNAKQVRE-----RESLIL-------- 106
Query: 306 LIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
+ KLLYV PER++ + SF + L +
Sbjct: 107 ------------QGKIKLLYVAPERLL-SPSFLDFLAVIDNYLG---------------- 137
Query: 366 CQRQLAGFVVDEAHCV 381
LA VDEAHCV
Sbjct: 138 ----LACLAVDEAHCV 149
>gi|436838278|ref|YP_007323494.1| ATP-dependent DNA helicase RecQ [Fibrella aestuarina BUZ 2]
gi|384069691|emb|CCH02901.1| ATP-dependent DNA helicase RecQ [Fibrella aestuarina BUZ 2]
Length = 735
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
+G FRP+Q ++ ++ +D VL+PTGGGKS+C+Q D
Sbjct: 31 YGYDRFRPMQEAVIRSILSGRDTVVLMPTGGGKSVCFQIPALMQPGLCVVVSPLIALMKD 90
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ ++L GI A ++NS Q + AV + R+G +
Sbjct: 91 QVEAMHLN-GIAAAYINSSQGAKEIRAVEENCRKGQI----------------------- 126
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV+PE+++ ++SF L L +L+ F +DEAH
Sbjct: 127 --KLLYVSPEKLL-SESFYTFLNSL------------------------KLSMFAIDEAH 159
Query: 380 CV 381
C+
Sbjct: 160 CI 161
>gi|425470694|ref|ZP_18849554.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
gi|389883511|emb|CCI36062.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
Length = 701
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 78/196 (39%), Gaps = 68/196 (34%)
Query: 207 LQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------- 257
+ A+D +E A FG FRP Q Q +A++ QD V++PTGGGKSLC+
Sbjct: 1 MAAIDSLEKALKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKG 60
Query: 258 ------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQ 305
QDQ+ L GI ATFLNS Q R+ L+L
Sbjct: 61 VTVVVSPLIALMQDQVTAL-ADNGIGATFLNSTLNAKQVRE-----RESLIL-------- 106
Query: 306 LIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
+ KLLYV PER++ + SF + L +
Sbjct: 107 ------------QGKIKLLYVAPERLL-SPSFLDFLAVIDNYLG---------------- 137
Query: 366 CQRQLAGFVVDEAHCV 381
LA VDEAHCV
Sbjct: 138 ----LACLAVDEAHCV 149
>gi|344302418|gb|EGW32692.1| hypothetical protein SPAPADRAFT_49652 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1278
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+F +FR Q +A AS+ ++D FVL+PTGGGKSLCY
Sbjct: 534 VFKLNSFRSNQLEAVIASLLRKDVFVLMPTGGGKSLCYQLPALVKGGLTKGTTVVISPLI 593
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L K + +NS+ T + + R+GL+
Sbjct: 594 SLMQDQVHHLE-KLNVNVRMINSKGTADEKRHTMHLFREGLL------------------ 634
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
++Y++PE ++ + F +V++ L+ +G QLA V
Sbjct: 635 -------DIVYLSPEMVIKSAMFQKVIEKLYNEG--------------------QLARVV 667
Query: 375 VDEAHCV 381
+DEAHC+
Sbjct: 668 IDEAHCL 674
>gi|417300406|ref|ZP_12087617.1| ATP-dependent DNA helicase RecQ [Rhodopirellula baltica WH47]
gi|327543280|gb|EGF29713.1| ATP-dependent DNA helicase RecQ [Rhodopirellula baltica WH47]
Length = 745
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 75/195 (38%)
Query: 211 DDMEFANVV---IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------- 258
D+M+ A+ V ++G +FRPLQ A + + +D V+LPTGGGKSLCYQ
Sbjct: 19 DEMDRAHSVLRSVWGYDSFRPLQADAVQDVIQGRDSLVVLPTGGGKSLCYQVPALVRDGM 78
Query: 259 ------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
DQ+ L G+ A +NS Q+V Q + +R+G +
Sbjct: 79 SVVVSPLISLMKDQVDALTSN-GVSAALVNSTQSVEQKRETAERIRRGEI---------- 127
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
K+LY+ PER++ ++ + L+ L
Sbjct: 128 ---------------KILYLAPERLLTPKTL-DFLRSL---------------------- 149
Query: 367 QRQLAGFVVDEAHCV 381
++ F +DEAHCV
Sbjct: 150 --PISFFAIDEAHCV 162
>gi|290477101|ref|YP_003470014.1| ATP-dependent DNA helicase [Xenorhabdus bovienii SS-2004]
gi|289176447|emb|CBJ83256.1| ATP-dependent DNA helicase [Xenorhabdus bovienii SS-2004]
Length = 608
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 56/133 (42%), Gaps = 47/133 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q Q A + +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQQVIDAVLDGRDCLVVMPTGGGKSLCYQIPALINNGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L G+ A LNS Q Q ++Q RQG
Sbjct: 81 QVDQLRAN-GVEAECLNSTQNREQQVDIIQRCRQG------------------------- 114
Query: 320 SCKLLYVTPERIV 332
S KLLY+ PER+V
Sbjct: 115 SIKLLYIAPERLV 127
>gi|367034884|ref|XP_003666724.1| hypothetical protein MYCTH_2072733 [Myceliophthora thermophila ATCC
42464]
gi|347013997|gb|AEO61479.1| hypothetical protein MYCTH_2072733 [Myceliophthora thermophila ATCC
42464]
Length = 485
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 34/178 (19%)
Query: 209 ALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-----DQIIT 263
+L D++F F AFRP Q + A++ +D FV T GKSLC+Q D+ IT
Sbjct: 8 SLQDIDFTLRQQFNKTAFRPYQREIILAALDGKDVFVQAATSFGKSLCFQLPAVIDRGIT 67
Query: 264 LNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKL 323
+ + + + +N +T+ A + L + L++ ++Q + P +L
Sbjct: 68 IVIS-PLLSLMMNQVETLRAANVDARTLNSNISLAERDRIYQDLAT-------GHPRARL 119
Query: 324 LYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
LYVTPE + F E LK +H QR+LA VVDEAHC+
Sbjct: 120 LYVTPE-LCSLDRFRERLKFVHE--------------------QRELARIVVDEAHCI 156
>gi|251787844|ref|YP_003002565.1| ATP-dependent DNA helicase RecQ [Dickeya zeae Ech1591]
gi|247536465|gb|ACT05086.1| ATP-dependent DNA helicase RecQ [Dickeya zeae Ech1591]
Length = 599
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A+V+ +DC V++PTGGGKSLCYQ D
Sbjct: 11 FGYQQFRPGQQAIINAAVSGRDCLVIMPTGGGKSLCYQIPALVLDGLTLVVSPLISLMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L +G+ A LNS Q+ Q AV R+G
Sbjct: 71 QVDQLQ-AYGVAAACLNSTQSREQQQAVFSACRRG------------------------- 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER LTTD L A +DEAH
Sbjct: 105 ELKLLYIAPER------------------------LTTD-GFLDQLAHWNTALIAIDEAH 139
Query: 380 CV 381
C+
Sbjct: 140 CI 141
>gi|453080950|gb|EMF09000.1| ATP-dependent DNA helicase [Mycosphaerella populorum SO2202]
Length = 1518
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 90/224 (40%), Gaps = 69/224 (30%)
Query: 185 VSNKKRSSLISDNEHGTLSFEELQALDDMEFANVV--IFGNRAFRPLQHQACKASVAKQD 242
V K+ ++ S+ E E ++ E A+ + +F + FR Q QA A+++ +D
Sbjct: 580 VKTKRGPAVQSEAEKQAAHRENMRFPWSQEVADRLTKVFKMKGFRENQFQAINATLSGKD 639
Query: 243 CFVLLPTGGGKSLCY-------------------------QDQIITLNLKFGIPATFLNS 277
FVL+PTGGGKSL Y QDQ+ L + GI A +N
Sbjct: 640 VFVLMPTGGGKSLTYQLPALIQTGKTRGVTVVVSPLLSLMQDQVQHLK-QLGIQAFLING 698
Query: 278 QQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSF 337
+ T V+ L + V Q + +LLYVTPE + +++
Sbjct: 699 ETTPEDKRRVMDALWKPNV-------EQFV--------------QLLYVTPEMLGKSENM 737
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ LHR+G + A V+DEAHCV
Sbjct: 738 LRAFEGLHRRG--------------------KFARLVIDEAHCV 761
>gi|308051389|ref|YP_003914955.1| ATP-dependent DNA helicase RecQ [Ferrimonas balearica DSM 9799]
gi|307633579|gb|ADN77881.1| ATP-dependent DNA helicase RecQ [Ferrimonas balearica DSM 9799]
Length = 608
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQ 279
+FG RAFRP Q + ++A +DC V++PTGGGKSLCYQ + L P +
Sbjct: 22 VFGFRAFRPGQDEVVAQTLAGRDCLVIMPTGGGKSLCYQLPALVL------PGLTVVISP 75
Query: 280 TVSQAAAVLQELRQGLV----LSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIV 332
+S + LR+ V L+ H+++ ++ R + KLLY++PER++
Sbjct: 76 LISLMKDQVDALRESGVAAAALNSSLERHEVVELMGAIHRGE---IKLLYISPERLL 129
>gi|121710174|ref|XP_001272703.1| RecQ family helicase MusN [Aspergillus clavatus NRRL 1]
gi|119400853|gb|EAW11277.1| RecQ family helicase MusN [Aspergillus clavatus NRRL 1]
Length = 1542
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 31/168 (18%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNS-- 277
F R FR Q +A A+++ +D FVL+PTGGGKSLCYQ ++T G+ T + S
Sbjct: 708 FHLRGFRMNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSVVTTGSTRGV--TIVVSPL 765
Query: 278 ----QQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVG 333
Q VS A+ ++ L+ + + + T + + +LLY+TPE I
Sbjct: 766 LSLMQDQVSHLKAI--NIKAFLLNGETKRDERTWIMQTLSGPVAEERIELLYITPEMINK 823
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+Q+ + L+ L+++ +LA V+DEAHCV
Sbjct: 824 SQALIQSLEKLNKR--------------------HRLARIVIDEAHCV 851
>gi|297802358|ref|XP_002869063.1| hypothetical protein ARALYDRAFT_491073 [Arabidopsis lyrata subsp.
lyrata]
gi|297314899|gb|EFH45322.1| hypothetical protein ARALYDRAFT_491073 [Arabidopsis lyrata subsp.
lyrata]
Length = 744
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 78/209 (37%), Gaps = 93/209 (44%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------- 258
FG+ FR Q +A +A V+ +DCF L+PTGGGKS+CYQ
Sbjct: 32 FGHADFRGKQLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPGIVLVVSPLIESLFL 91
Query: 259 --------------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELR 292
+Q++ L K GI A +L+S Q + ++L
Sbjct: 92 LVSLTMCFVSTLMLSCFFFNFSALMENQVMALKEK-GIAAEYLSSTQATHVKNKIHEDLD 150
Query: 293 QGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRL 352
G KPS +LLYVTPE ++ + F L+ LH +G + L
Sbjct: 151 SG-----------------------KPSVRLLYVTPE-LIATKGFMLKLRKLHSRGLLNL 186
Query: 353 KVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+DEAHC+
Sbjct: 187 --------------------IAIDEAHCI 195
>gi|261415059|ref|YP_003248742.1| ATP-dependent DNA helicase RecQ [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|385790017|ref|YP_005821140.1| ATP-dependent DNA helicase RecQ [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371515|gb|ACX74260.1| ATP-dependent DNA helicase RecQ [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326372|gb|ADL25573.1| ATP-dependent DNA helicase RecQ [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 614
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 71/183 (38%), Gaps = 73/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG AFRP+Q + + V+ +D VL+PTGGGKS+CYQ
Sbjct: 11 VFGYDAFRPMQEEIIEHVVSGKDALVLMPTGGGKSICYQIPALMFKGITVVISPLISLMK 70
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ LN GI A LNS + AA+ Q + G
Sbjct: 71 DQVDALNAN-GIGADALNSNNEEGENAAIRQRCKAG------------------------ 105
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
K+LY++PER+ + L + SI L F +DEA
Sbjct: 106 -QTKILYISPERL------QREIPWLQQHLSISL--------------------FAIDEA 138
Query: 379 HCV 381
HC+
Sbjct: 139 HCI 141
>gi|346979414|gb|EGY22866.1| ATP-dependent helicase SGS1 [Verticillium dahliae VdLs.17]
Length = 1518
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 53/179 (29%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATF 274
F R FR Q +A A++A +D FVL+PTGGGKSLCYQ ++T GI P
Sbjct: 621 FRMRGFRTNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAVVTSGKTKGITVVVSPLLS 680
Query: 275 LNSQQ----------TVSQAAAVLQELRQGLV--LSQHYFLHQLIFVLTCASRKDKPSCK 322
L Q + ++A+ R+ ++ ++ Y HQ
Sbjct: 681 LMQDQVDHLTALGIKAKAFSSAIQAPARREILEFMNSPYPDHQFT--------------- 725
Query: 323 LLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+LYV+PE + + F L ++R ++LA FVVDEAHCV
Sbjct: 726 MLYVSPEMLNASAQFERALANVYR--------------------NQKLARFVVDEAHCV 764
>gi|403419682|emb|CCM06382.1| predicted protein [Fibroporia radiculosa]
Length = 1116
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 74/186 (39%), Gaps = 67/186 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY----------------------- 257
FG +FR Q + A++ +D VL+PTGGGKSLCY
Sbjct: 387 FGLTSFRKNQLETIIATMTGRDTLVLMPTGGGKSLCYQLPAICTSGVTRGVTVVISPLLA 446
Query: 258 --QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
QDQ+ LN K GI + NS Q ++A V LR
Sbjct: 447 LMQDQVEQLNRK-GIDVLYFNSDQDREESARVASHLR-------------------AYGT 486
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
+KP ++Y TPE++ + F +LK L+ KG LA F +
Sbjct: 487 GNKPL--IVYATPEKLQHSGEFLSILKGLYSKG--------------------LLARFPI 524
Query: 376 DEAHCV 381
DEAHC+
Sbjct: 525 DEAHCI 530
>gi|336476813|ref|YP_004615954.1| ATP-dependent DNA helicase RecQ [Methanosalsum zhilinae DSM 4017]
gi|335930194|gb|AEH60735.1| ATP-dependent DNA helicase RecQ [Methanosalsum zhilinae DSM 4017]
Length = 611
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 74/181 (40%), Gaps = 70/181 (38%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-------------DQIITL--- 264
FG FRPLQ + + +D F L+PTGGGKSLCYQ +I+L
Sbjct: 9 FGYNDFRPLQKEIISDILEGKDTFALMPTGGGKSLCYQLPALMMDGVTVVISPLISLMKD 68
Query: 265 ---NLKF-GIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
NLK GI A +LNS SQ V ++L +
Sbjct: 69 QVDNLKSNGIAAEYLNSTLGYSQIKQVHEKLIDNRI------------------------ 104
Query: 321 CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
K+LYV PER++ + +FS + +KG + + F VDEAHC
Sbjct: 105 -KILYVAPERLIMSDTFSYL-----KKGKVSM--------------------FAVDEAHC 138
Query: 381 V 381
+
Sbjct: 139 I 139
>gi|391864070|gb|EIT73368.1| ATP-dependent DNA helicase [Aspergillus oryzae 3.042]
Length = 1174
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 27/166 (16%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIP---ATFLN 276
F R FR Q +A A+++ +D FVL+PTGGGKSLCYQ I+ G+ + L+
Sbjct: 349 FHLRGFRLNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSIVKSGTTRGVTIVISPLLS 408
Query: 277 SQQTVSQAAAVLQ-ELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQ 335
Q Q + Q E++ L+ + + + T +S + +LLY+TPE + NQ
Sbjct: 409 LMQ--DQVYHLRQLEIKAYLLNGETQKTERQWIMSTLSSSDAEGHIELLYITPEMVNKNQ 466
Query: 336 SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ + L+ L+ + +LA V+DEAHCV
Sbjct: 467 TLTRNLERLNNR--------------------HRLARIVIDEAHCV 492
>gi|395218411|ref|ZP_10402063.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
gi|394454486|gb|EJF09132.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
Length = 624
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 74/184 (40%), Gaps = 72/184 (39%)
Query: 219 VIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-------------------- 258
+ FG FRP+Q + ++D VL+PTGGGKS+CYQ
Sbjct: 14 LYFGYEQFRPMQEHIITNILQQKDVVVLMPTGGGKSVCYQVPAVVMPGLCVVVSPLIALM 73
Query: 259 -DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD 317
DQ+ L L GIPA +LNS QT + + ++ G +
Sbjct: 74 KDQVEAL-LANGIPAAYLNSSQTADEQYQIEEKSLAGQI--------------------- 111
Query: 318 KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDE 377
KLLYV+PE+++ FS LK L Q++ F VDE
Sbjct: 112 ----KLLYVSPEKLLSAGFFS-FLKRL------------------------QVSLFAVDE 142
Query: 378 AHCV 381
AHC+
Sbjct: 143 AHCI 146
>gi|398799825|ref|ZP_10559106.1| ATP-dependent DNA helicase RecQ [Pantoea sp. GM01]
gi|398097370|gb|EJL87679.1| ATP-dependent DNA helicase RecQ [Pantoea sp. GM01]
Length = 608
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 69/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + ++A +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQNIIETALAGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS QT Q V + R G
Sbjct: 81 QVDQL-LANGVAAACLNSTQTREQQQQVFADCRSG------------------------- 114
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER++ L LH+ + L VDEAH
Sbjct: 115 KLKLLYIAPERLM----MDNFLDSLHQWNPVML---------------------AVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|167587777|ref|ZP_02380165.1| ATP-dependent DNA helicase RecQ [Burkholderia ubonensis Bu]
Length = 615
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 72/187 (38%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + +QAAA + LR+G
Sbjct: 71 ALMQDQVAALS-EVGVRAAYLNSTLSGAQAAATERALREG-------------------- 109
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + L L R ++ F
Sbjct: 110 -----DIDLLYVAPERLMTGR----FLDLLDRA---------------------KIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|302414652|ref|XP_003005158.1| ATP-dependent helicase SGS1 [Verticillium albo-atrum VaMs.102]
gi|261356227|gb|EEY18655.1| ATP-dependent helicase SGS1 [Verticillium albo-atrum VaMs.102]
Length = 1714
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 53/179 (29%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPA------T 273
F R FR Q +A A++A +D FVL+PTGGGKSLCYQ ++T GI +
Sbjct: 816 FRMRGFRTNQLEAINATLAGKDAFVLMPTGGGKSLCYQLPAVVTSGKTKGITVVVSPLLS 875
Query: 274 FLNSQ---------QTVSQAAAVLQELRQGLV--LSQHYFLHQLIFVLTCASRKDKPSCK 322
+ Q + + ++A+ R+ ++ ++ Y HQ
Sbjct: 876 LMQDQVDHLTALGIKAKAFSSAIQAPARREILEFMNSPYPDHQFT--------------- 920
Query: 323 LLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+LYV+PE + + F L ++R ++LA FVVDEAHCV
Sbjct: 921 MLYVSPEMLNASAQFERALTNVYR--------------------NQKLARFVVDEAHCV 959
>gi|393763185|ref|ZP_10351808.1| ATP-dependent DNA helicase RecQ [Alishewanella agri BL06]
gi|392606102|gb|EIW88990.1| ATP-dependent DNA helicase RecQ [Alishewanella agri BL06]
Length = 606
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 74/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
IFG ++R Q + A++A +DCFVLLPTGGGKSLCYQ
Sbjct: 12 IFGYSSWRDGQAEIIAAALAGRDCFVLLPTGGGKSLCYQLPALQLPKVTVVVSPLMSLMK 71
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ TL GI A ++NS + VL +LR
Sbjct: 72 DQVDTLQAN-GIAAAYVNSSLSREAVLEVLNQLRYD------------------------ 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PER++ Q F E RL+ + + F +DEA
Sbjct: 107 -ELKLLYVAPERLLQPQ-FIE-----------RLQEVGVSL-------------FAIDEA 140
Query: 379 HCV 381
HCV
Sbjct: 141 HCV 143
>gi|299741849|ref|XP_001832077.2| DNA helicase [Coprinopsis cinerea okayama7#130]
gi|298404912|gb|EAU89723.2| DNA helicase [Coprinopsis cinerea okayama7#130]
Length = 1129
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 74/187 (39%), Gaps = 72/187 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG +FR Q +A +++ +D FVL+PTGGGKSLCYQ
Sbjct: 365 VFGLDSFRKNQLEAVLSAMDGKDTFVLMPTGGGKSLCYQLPAVCTSGPRRGVSIVVTPLV 424
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L K+ + A N+ S + + L QG +
Sbjct: 425 ALMNDQVGQLTKKYRVNAVLWNADNQAS--SEHITALNQGQIA----------------- 465
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYVTPE++V + ++ K L+ G LA FV
Sbjct: 466 --------LLYVTPEKLVESNRAKDIFKRLYESG--------------------LLARFV 497
Query: 375 VDEAHCV 381
+DEAHC+
Sbjct: 498 IDEAHCI 504
>gi|325298909|ref|YP_004258826.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
gi|324318462|gb|ADY36353.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
Length = 606
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 73/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + + K+D VL+PTGGGKSLCYQ D
Sbjct: 9 FGYTSFRPLQEEIISCVLQKKDTLVLMPTGGGKSLCYQIPALLTEGTAIVVSPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GI A LNS + A + E RQG V
Sbjct: 69 QVEALQ-NNGIIARALNSNNDETANANIRFECRQGRV----------------------- 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PER++ ++ +LK +H ++ F +DEAH
Sbjct: 105 --KLLYISPERLLAEINY--LLKDIH------------------------ISLFAIDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|242766468|ref|XP_002341176.1| RecQ family helicase RecQ, putative [Talaromyces stipitatus ATCC
10500]
gi|218724372|gb|EED23789.1| RecQ family helicase RecQ, putative [Talaromyces stipitatus ATCC
10500]
Length = 539
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 76/191 (39%), Gaps = 66/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++F +FG +FRPLQ + A + D F+ T GKSLC+Q
Sbjct: 11 DIDFTLRRVFGKTSFRPLQREVISAVIDGHDVFLQAATSFGKSLCFQLPAVVSHGVTLVV 70
Query: 259 --------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
DQ+ L +GIP +N +S+ A++++ +LS H
Sbjct: 71 SPLLSLMVDQVAALE-AYGIPVATINGTTPLSERKAIIED-----ILSGH---------- 114
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE ++F LK +H +G +L
Sbjct: 115 --------PKIRLLYVTPE-FCCTETFRRNLKRIHAQG--------------------EL 145
Query: 371 AGFVVDEAHCV 381
+DEAHC+
Sbjct: 146 TRVAIDEAHCI 156
>gi|22651415|gb|AAL05260.1| QDE3-like protein [Blumeria graminis]
Length = 1632
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 75/186 (40%), Gaps = 67/186 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------- 258
F + FR Q +A A++ +D F+L+PTGGGKSLCYQ
Sbjct: 795 FKLKGFRHHQLEAINATLNGEDAFILMPTGGGKSLCYQLPAVVQSGKTKGVTIVVSPLLS 854
Query: 259 ---DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
DQ+ L K I A +N ++ ++ LRQ QH H
Sbjct: 855 LMHDQVEHLR-KNSIQAATINGDTDSAERREIMNNLRQ-----QHPEQH----------- 897
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
+LLYVTPE + + ++L L+++ +LA FV+
Sbjct: 898 -----IQLLYVTPEMVSQSGQMGDILSSLNQRS--------------------KLARFVI 932
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 933 DEAHCV 938
>gi|392309341|ref|ZP_10271875.1| ATP-dependent DNA helicase [Pseudoalteromonas citrea NCIMB 1889]
Length = 603
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 72/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
IFG FR Q A++A+QD VLLPTGGGKSLCY Q
Sbjct: 18 IFGYSEFRDGQKAVIDAALARQDSLVLLPTGGGKSLCYQVPALVLDGITVVVSPLISLMQ 77
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+ A F+N+ Q A+ Q + G V
Sbjct: 78 DQVAQLQ-ALGVSAEFINNSVPREQQHAIYQRVHDGDV---------------------- 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PE+I+ E ++ LH LP ++ F +DEA
Sbjct: 115 ---KLLYVAPEKILQ----YEFIERLHH---------------LP------VSLFAIDEA 146
Query: 379 HCV 381
HCV
Sbjct: 147 HCV 149
>gi|365990115|ref|XP_003671887.1| hypothetical protein NDAI_0I00750 [Naumovozyma dairenensis CBS 421]
gi|343770661|emb|CCD26644.1| hypothetical protein NDAI_0I00750 [Naumovozyma dairenensis CBS 421]
Length = 1434
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 73/187 (39%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
IF FRP Q +A A+++ +D F+L+PTGGGKSLCY
Sbjct: 663 IFKLPGFRPNQEEAVSATLSGKDVFILMPTGGGKSLCYQLPAVIKSGKTKGTTIVISPLI 722
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L I A+ +S+ TV + V GL+
Sbjct: 723 SLMQDQVQHL-LDKNIKASMFSSRGTVEEKRQVFNLFICGLL------------------ 763
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
++Y++PE I ++ +K LH G +LA V
Sbjct: 764 -------DVVYISPEMISASEQCKRAIKRLHSDG--------------------KLARVV 796
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 797 VDEAHCV 803
>gi|302832866|ref|XP_002947997.1| hypothetical protein VOLCADRAFT_57553 [Volvox carteri f.
nagariensis]
gi|300266799|gb|EFJ50985.1| hypothetical protein VOLCADRAFT_57553 [Volvox carteri f.
nagariensis]
Length = 646
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 29/164 (17%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-PATFLNS 277
+FG R FR LQ + A++ +D LLP+GGGKSLCYQ +++ L + P L
Sbjct: 47 VFGLREFRALQREVMNAALQGRDVLCLLPSGGGKSLCYQLPALVSPGLTLVVSPLLSLIQ 106
Query: 278 QQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSF 337
Q +S A + G L+ L V + ++ KLLYVTPE+IV ++ F
Sbjct: 107 DQVLSLRALSI----NGSCLTS---LSSKEEVAEVYGKMERGELKLLYVTPEKIVSSKRF 159
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L+ +H+ G +L +DEAHC
Sbjct: 160 MSKLEKVHQGG--------------------RLDRIAIDEAHCA 183
>gi|193212332|ref|YP_001998285.1| ATP-dependent DNA helicase RecQ [Chlorobaculum parvum NCIB 8327]
gi|193085809|gb|ACF11085.1| ATP-dependent DNA helicase RecQ [Chlorobaculum parvum NCIB 8327]
Length = 609
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 72/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
IFG +FRP Q + +A + +D F ++PTGGGKSLCYQ
Sbjct: 20 IFGFHSFRPNQEEIVRALMGGRDVFAVMPTGGGKSLCYQLPAVLMPGTALVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L GI A FLNS + +AVL+ L+ G
Sbjct: 80 DQVDAARLN-GIKAAFLNSSLDFTDQSAVLRSLQSG------------------------ 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER +Q F E+L C +A V+DEA
Sbjct: 115 -DLDLLYVAPERFALDQ-FRELLA----------------------GCCISIA--VIDEA 148
Query: 379 HCV 381
HC+
Sbjct: 149 HCI 151
>gi|429329645|gb|AFZ81404.1| ATP-dependent DNA helicase, RecQ family member protein [Babesia
equi]
Length = 1077
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 80/192 (41%), Gaps = 62/192 (32%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------ 258
D ++ N +FG + FR +Q A A + +DCFV++ TGGGKS CYQ
Sbjct: 391 DKLDRLNETVFGYKGFRGVQLAAINAIMLGRDCFVMMATGGGKSHCYQLPSLLLNGLVVV 450
Query: 259 ---------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
DQI + +GI A LN++ T A L+ L + L+ F H I
Sbjct: 451 FSPLISLMEDQIHIIK-SYGIQAETLNAKST----AQDLRHLSKRLLDKNETFEHGCI-- 503
Query: 310 LTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
L++TPE+ + S ++L+ + ++L
Sbjct: 504 --------------LFITPEKFDKSTSVMKLLQNVDNADRLKL----------------- 532
Query: 370 LAGFVVDEAHCV 381
FV+DEAHCV
Sbjct: 533 ---FVIDEAHCV 541
>gi|367009466|ref|XP_003679234.1| hypothetical protein TDEL_0A06910 [Torulaspora delbrueckii]
gi|359746891|emb|CCE90023.1| hypothetical protein TDEL_0A06910 [Torulaspora delbrueckii]
Length = 1364
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 79/195 (40%), Gaps = 71/195 (36%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
++E+ IF FRP Q +A A+++ +D FVL+PTGGGKSLCYQ
Sbjct: 596 EVEYRLREIFKLPGFRPHQLEAINATLSGKDVFVLMPTGGGKSLCYQLPAVVKSGKTKGT 655
Query: 259 ------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
DQ+ L L I A+ +S+ T Q RQ L F+H L
Sbjct: 656 TIVISPLISLMQDQVEHL-LSNNIKASMFSSKGTAEQR-------RQTFNL----FIHGL 703
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
+ L+Y++PE I ++ + L+ G
Sbjct: 704 L--------------DLIYISPEMISASEQCKRGINKLYNDG------------------ 731
Query: 367 QRQLAGFVVDEAHCV 381
+LA VVDEAHCV
Sbjct: 732 --KLARIVVDEAHCV 744
>gi|254253522|ref|ZP_04946840.1| Superfamily II DNA helicase [Burkholderia dolosa AUO158]
gi|124896131|gb|EAY70011.1| Superfamily II DNA helicase [Burkholderia dolosa AUO158]
Length = 615
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 74/187 (39%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYSAFRGQQGDIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGHGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++AAA + LR+G +
Sbjct: 71 ALMQDQVAALR-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + F E+L+ + ++ F
Sbjct: 112 -------DLLYVAPERLMTGR-FLELLE------------------------RAKIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|410455550|ref|ZP_11309427.1| ATP-dependent DNA helicase RecQ [Bacillus bataviensis LMG 21833]
gi|409929031|gb|EKN66121.1| ATP-dependent DNA helicase RecQ [Bacillus bataviensis LMG 21833]
Length = 709
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q QA ++ +A+++ ++PTGGGKS+CYQ D
Sbjct: 13 FGYSTFRNGQEQAIRSVLAQENTICVMPTGGGKSICYQIPALVLPGTTIVISPLISLMKD 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L ++ GIPATF+NS + S+A + E +QG
Sbjct: 73 QVDAL-IQVGIPATFINSSLSYSEANKRIYEAKQG------------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+ + F E L+ + ++ VDEAH
Sbjct: 107 KYKLLYIAPERL-ESYEFVEDLRSM------------------------EIPLVAVDEAH 141
Query: 380 CV 381
C+
Sbjct: 142 CI 143
>gi|183600296|ref|ZP_02961789.1| hypothetical protein PROSTU_03856 [Providencia stuartii ATCC 25827]
gi|188020087|gb|EDU58127.1| ATP-dependent DNA helicase RecQ [Providencia stuartii ATCC 25827]
Length = 608
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 72/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG ++FRP Q +A + +DC VL+PTGGGKSLCYQ D
Sbjct: 21 FGYQSFRPGQEAVIRAILDNRDCLVLMPTGGGKSLCYQVPALVKEGVTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L GI A LNS QT + V+ QG +
Sbjct: 81 QVDQLRLH-GIKAACLNSSQTAQEQRDVMALCAQGAI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ + S++ S + +L VDEAH
Sbjct: 117 --KLLYVAPERLLTDYFLSQL-------SSWNISLLA------------------VDEAH 149
Query: 380 CV 381
CV
Sbjct: 150 CV 151
>gi|291001553|ref|XP_002683343.1| predicted protein [Naegleria gruberi]
gi|284096972|gb|EFC50599.1| predicted protein [Naegleria gruberi]
Length = 402
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 72/183 (39%), Gaps = 66/183 (36%)
Query: 221 FGNRAFRPLQHQACKASVA-KQDCFVLLPTGGGKSLCYQ--------------------- 258
F FRP Q + V KQD V+LPTGGGKSLCYQ
Sbjct: 9 FKLEEFRPNQFEIIFNLVKNKQDTLVILPTGGGKSLCYQLPSLILPGVTLVVSPLISLMH 68
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
+Q+ L+ IP+ + NS Q S+ + +L G
Sbjct: 69 NQVQALD-HLSIPSNYWNSSQKKSEIQKIQSDLESG-----------------------N 104
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
P+ KLLYVTPE + NQ+F +++ L + QL+ +DE+
Sbjct: 105 PNYKLLYVTPELLTSNQTFQSIMRLLASRD--------------------QLSLIAIDES 144
Query: 379 HCV 381
HC+
Sbjct: 145 HCI 147
>gi|398835929|ref|ZP_10593279.1| ATP-dependent DNA helicase RecQ [Herbaspirillum sp. YR522]
gi|398214251|gb|EJN00833.1| ATP-dependent DNA helicase RecQ [Herbaspirillum sp. YR522]
Length = 618
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 73/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG +FR Q + + + D VL+PTGGGKSLCY Q
Sbjct: 24 VFGYSSFRGQQGEIVRHVASGGDALVLMPTGGGKSLCYQVPSLLREGVGVVVSPLIALMQ 83
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L+ + G+ A FLNS Q+ +A + + LRQG
Sbjct: 84 DQVDALD-EVGVRAAFLNSSQSFDEAMQIERRLRQG------------------------ 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+LYV PER++ +CL SI++ + F +DEA
Sbjct: 119 -DLDVLYVAPERLMTQ-------RCLDLLDSIKIGL------------------FAIDEA 152
Query: 379 HCV 381
HCV
Sbjct: 153 HCV 155
>gi|340377955|ref|XP_003387494.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Amphimedon
queenslandica]
Length = 906
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 73/185 (39%), Gaps = 69/185 (37%)
Query: 221 FGNRAFRP-LQHQACKASV-AKQDCFVLLPTGGGKSLCYQ-------------------- 258
FG F+ LQ +A + K+D F+ +PTG GKSLCYQ
Sbjct: 19 FGYSEFKTSLQREAVECVFEGKKDVFISMPTGSGKSLCYQLPALLAKKGLALVLSPLIAL 78
Query: 259 --DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRK 316
DQ+ +L K G+PA LNS+ + S + + +L+
Sbjct: 79 IEDQVSSLQSK-GLPAVALNSKTSASDRSKIASQLKL----------------------- 114
Query: 317 DKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
P KLLYVTPE +V +F E L LHR G + +D
Sbjct: 115 KSPPIKLLYVTPE-MVATSNFRETLTRLHRNGGVVF--------------------IAID 153
Query: 377 EAHCV 381
EAHCV
Sbjct: 154 EAHCV 158
>gi|24375725|ref|NP_719768.1| ATP-dependent DNA helicase RecQ [Shewanella oneidensis MR-1]
gi|24350662|gb|AAN57212.1|AE015857_5 ATP-dependent DNA helicase RecQ [Shewanella oneidensis MR-1]
Length = 607
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 74/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FR Q + + +DC V++PTGGGKSLCYQ
Sbjct: 20 VFGYRDFRDGQREVIERVCRGEDCLVIMPTGGGKSLCYQLPALMMHGITIVVSPLISLMK 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L L+ G+ A +LNS Q + VL++L G
Sbjct: 80 DQVDSL-LQTGVNAAYLNSSQPRELSLEVLRQLHLG------------------------ 114
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ F E ++ L L+ F +DEA
Sbjct: 115 -ELKLLYVSPERLL-TADFIERMQSL------------------------PLSMFAIDEA 148
Query: 379 HCV 381
HC+
Sbjct: 149 HCI 151
>gi|405951075|gb|EKC19019.1| ATP-dependent DNA helicase Q5 [Crassostrea gigas]
Length = 1138
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 80/185 (43%), Gaps = 68/185 (36%)
Query: 220 IFGNRAFRP-LQHQACKASV-AKQDCFVLLPTGGGKSLCY-------------------- 257
IF + F+ LQ +A K V K D F+ +PTG GKSLCY
Sbjct: 12 IFKHDDFKSDLQKRAVKCVVEGKNDVFISMPTGAGKSLCYQLPAVASPGITVVVSPLIAL 71
Query: 258 -QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRK 316
QDQ+ L + IPA +NS+ T Q A V+++L +
Sbjct: 72 MQDQLEHLEI-LKIPAETINSKMTTKQRAKVVEDLNRA---------------------- 108
Query: 317 DKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
KP KLLY+TPE Q+ SE + L +G ++ ++LT FVVD
Sbjct: 109 -KPKTKLLYITPE-----QAASEGCRTLI-EGLVKRQMLTY---------------FVVD 146
Query: 377 EAHCV 381
EAHCV
Sbjct: 147 EAHCV 151
>gi|33151690|ref|NP_873043.1| ATP-dependent DNA helicase [Haemophilus ducreyi 35000HP]
gi|33147911|gb|AAP95432.1| ATP-dependent DNA helicase [Haemophilus ducreyi 35000HP]
Length = 601
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 72/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
IFG + FR Q + +A + QDC V++ TGGGKSLCYQ
Sbjct: 15 IFGYQHFRNGQQEVIEAVLTGQDCLVIMTTGGGKSLCYQVPALCLEGITLVISPLISLMK 74
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L L +GI A ++N QT + V Q+ G
Sbjct: 75 DQVDQL-LTYGIEAGYINCSQTFEEQQRVEQKALSG------------------------ 109
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLY++PE+++ FS + C +++ VVDEA
Sbjct: 110 -QLKLLYLSPEKVMTQAFFSFIFHC-------------------------KISLIVVDEA 143
Query: 379 HCV 381
HCV
Sbjct: 144 HCV 146
>gi|402567923|ref|YP_006617268.1| ATP-dependent DNA helicase RecQ [Burkholderia cepacia GG4]
gi|402249120|gb|AFQ49574.1| ATP-dependent DNA helicase RecQ [Burkholderia cepacia GG4]
Length = 615
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 72/187 (38%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++AAA + LR+G +
Sbjct: 71 ALMQDQVAALR-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + L L R ++ F
Sbjct: 112 -------DLLYVAPERLMTGR----FLDLLERA---------------------KIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|386821390|ref|ZP_10108606.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
gi|386426496|gb|EIJ40326.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
Length = 699
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 47/132 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + + DC V++PTGGGKS+CYQ D
Sbjct: 15 FGYDSFRPLQREIIDTILNGNDCLVIMPTGGGKSICYQLPALLQDGLTIVISPLIALMKD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN+ GIPA FLNS Q+ ++ + ++ +
Sbjct: 75 QVDGLNVN-GIPACFLNSSQSTAEQEVIFNDI-------------------------EAK 108
Query: 320 SCKLLYVTPERI 331
KLLYV PE +
Sbjct: 109 KIKLLYVAPESL 120
>gi|258566155|ref|XP_002583822.1| hypothetical protein UREG_06789 [Uncinocarpus reesii 1704]
gi|237907523|gb|EEP81924.1| hypothetical protein UREG_06789 [Uncinocarpus reesii 1704]
Length = 1196
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 77/191 (40%), Gaps = 66/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++F +FG +AFRPLQ + +A + D F+ T GKS+CYQ
Sbjct: 632 DVDFTLRRVFGKKAFRPLQREVIQAVIEGHDVFLQAATSFGKSICYQLPAVISHGITIVV 691
Query: 259 --------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
DQ+ TL GIP +NS S+ A+ + +LS H
Sbjct: 692 SPLLSLMVDQVSTLEAN-GIPVATINSTTPQSKRKAITAD-----ILSGH---------- 735
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE ++F + +K +H +G +L
Sbjct: 736 --------PIIRLLYVTPE-YCQTEAFRKHVKQVHSQG--------------------EL 766
Query: 371 AGFVVDEAHCV 381
+DEAHCV
Sbjct: 767 NRIAIDEAHCV 777
>gi|342320631|gb|EGU12570.1| Hypothetical Protein RTG_01103 [Rhodotorula glutinis ATCC 204091]
Length = 979
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 51/228 (22%)
Query: 177 VSTSSASSVSNKKRSSLISDNEHGTLSF--EELQALDDMEFANVVIFGNRAFRPLQHQAC 234
V+ +S S + K +S+ S G + + + D+ E I+G + +RP Q A
Sbjct: 139 VTIASRKSSAPKAKSAAPSRPSAGAVDYTSKRFSWSDEAERLAGDIWGVKKWRPGQEGAI 198
Query: 235 KASVAKQDCFVLLPTGGGKSLCYQ---------------------DQIITLNLKFGIPAT 273
A++ ++ +LPTGGGKSL +Q DQ+ L+ + G+ A
Sbjct: 199 NATLDGREVVAVLPTGGGKSLIFQIPALLSKGTTIVITPLISLMSDQVHNLHAR-GVAAE 257
Query: 274 FLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVG 333
+++ + ++ ++Q + G V S+ + KL+YVTPERI
Sbjct: 258 MIHASTSQAEIKEIMQRM-LGTVGSKGKGKKAAAAMEQAE------EVKLVYVTPERIEK 310
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+++F L+ ++ G LA FV+DEAHCV
Sbjct: 311 SKTFVNTLQKMYDAG--------------------LLARFVIDEAHCV 338
>gi|32476457|ref|NP_869451.1| hypothetical protein RB10487 [Rhodopirellula baltica SH 1]
gi|32447002|emb|CAD78908.1| recQ [Rhodopirellula baltica SH 1]
Length = 1002
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A A DC ++PTGGGKSLCYQ D
Sbjct: 43 FGLKEFRPGQRDVVDALAAGTDCLCVMPTGGGKSLCYQLPSLAREGTTIVVSPLIALMKD 102
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL + GI A LNS Q+ Q +V++E+ G
Sbjct: 103 QVDTLQRR-GIQARLLNSTQSPGQQESVMEEMAAG------------------------- 136
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
L+YV PER+ N F +V+ K ++ L VDEAH
Sbjct: 137 KLDLIYVAPERLR-NGRFLDVVP----KANVSL--------------------LAVDEAH 171
Query: 380 CV 381
CV
Sbjct: 172 CV 173
>gi|421614059|ref|ZP_16055128.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula baltica
SH28]
gi|408495266|gb|EKJ99855.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula baltica
SH28]
Length = 1002
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A A DC ++PTGGGKSLCYQ D
Sbjct: 43 FGLKEFRPGQRDVVDALAAGTDCLCVMPTGGGKSLCYQLPSLAREGTTIVVSPLIALVKD 102
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL + GI A LNS Q+ Q +V++E+ G
Sbjct: 103 QVDTLQRR-GIQARLLNSTQSPGQQESVMEEMAAG------------------------- 136
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
L+YV PER+ N F +V+ K ++ L VDEAH
Sbjct: 137 KLDLIYVAPERLR-NGRFLDVVP----KANVSL--------------------LAVDEAH 171
Query: 380 CV 381
CV
Sbjct: 172 CV 173
>gi|296274236|ref|YP_003656867.1| ATP-dependent DNA helicase RecQ [Arcobacter nitrofigilis DSM 7299]
gi|296098410|gb|ADG94360.1| ATP-dependent DNA helicase RecQ [Arcobacter nitrofigilis DSM 7299]
Length = 702
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 69/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
IFG+ FR Q + + + KQD +LPTGGGKSLCY Q
Sbjct: 11 IFGHEHFRSFQEEVVDSIINKQDVLTILPTGGGKSLCYQLPTLLMSGTTVVISPLIALMQ 70
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQI LN I A ++S QT + +Q+L +G
Sbjct: 71 DQIKALN-DLDIKADMISSSQTNDENGFTMQKLLRG------------------------ 105
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
K +YV PER N F VL+ ++ + FV+DEA
Sbjct: 106 -ELKFIYVAPERFTSN-DFVGVLQRIN------------------------INYFVIDEA 139
Query: 379 HCV 381
HCV
Sbjct: 140 HCV 142
>gi|307106002|gb|EFN54249.1| hypothetical protein CHLNCDRAFT_16802, partial [Chlorella
variabilis]
Length = 351
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 46/149 (30%)
Query: 225 AFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QDQIIT 263
+FR Q +A A++A QDCFVL+PTGGGKSLCY QDQ+
Sbjct: 4 SFRGRQLEAIMAALAGQDCFVLMPTGGGKSLCYALVPAIRPGTVLVVSPLIALMQDQVQA 63
Query: 264 LNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKL 323
L + G+ A L+S +T + +L++L+Q +P +L
Sbjct: 64 LRAR-GLRADLLSSTRTEADRRRLLEDLQQ-----------------------HRPDTQL 99
Query: 324 LYVTPERIVGNQSFSEVLKCLHRKGSIRL 352
LYVTPE ++ F L+ + G+++L
Sbjct: 100 LYVTPE-LLATAGFMRCLRGAYAAGALQL 127
>gi|300721460|ref|YP_003710735.1| ATP-dependent DNA helicase [Xenorhabdus nematophila ATCC 19061]
gi|297627952|emb|CBJ88501.1| ATP-dependent DNA helicase [Xenorhabdus nematophila ATCC 19061]
Length = 608
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q Q A + DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQQVIDAVLDGLDCLVVMPTGGGKSLCYQIPALVKDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L G+ A LNS Q+ Q ++Q RQG
Sbjct: 81 QVDQLRAN-GVEAECLNSTQSREQQFDIIQRCRQG------------------------- 114
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
S KLLY+ PER+V + L+ LH + L VDEAH
Sbjct: 115 SIKLLYIAPERLVTD----NFLEQLHDWRPVVL---------------------AVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|296826998|ref|XP_002851081.1| DNA helicase [Arthroderma otae CBS 113480]
gi|238838635|gb|EEQ28297.1| DNA helicase [Arthroderma otae CBS 113480]
Length = 576
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 77/191 (40%), Gaps = 66/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++F +FG R+FRPLQ +A++ D F+ T GKSLC+Q
Sbjct: 7 DIDFTLRRVFGKRSFRPLQRDVIQAAIEGHDVFLQAATSFGKSLCFQLPAVVAHGVTVVV 66
Query: 259 --------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
DQ+ +L + IP +NS VS+ +L + +LS H
Sbjct: 67 SPLLSLMVDQVASLEAR-AIPVATINSTTPVSKRKKILAD-----ILSGH---------- 110
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE ++F + +H++G +L
Sbjct: 111 --------PVTRLLYVTPE-YCQTETFRRSILTVHQQG--------------------EL 141
Query: 371 AGFVVDEAHCV 381
+DEAHCV
Sbjct: 142 TRVAIDEAHCV 152
>gi|385207800|ref|ZP_10034668.1| ATP-dependent DNA helicase RecQ [Burkholderia sp. Ch1-1]
gi|385180138|gb|EIF29414.1| ATP-dependent DNA helicase RecQ [Burkholderia sp. Ch1-1]
Length = 615
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 73/187 (39%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPSLVRRERGFGTGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++A A + LR+G +
Sbjct: 71 ALMQDQVAALT-EVGVRAAYLNSTLSSAEAMATERALREGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F E+L+ + ++ F
Sbjct: 112 -------DLLYVAPERLM-TPRFQELLE------------------------RTRIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|440714432|ref|ZP_20895011.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula baltica
SWK14]
gi|436440628|gb|ELP33932.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula baltica
SWK14]
Length = 1002
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A A DC ++PTGGGKSLCYQ D
Sbjct: 43 FGLKEFRPGQRDVVDALAAGTDCLCVMPTGGGKSLCYQLPSLAREGTTIVVSPLIALMKD 102
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL + GI A LNS Q+ Q +V++E+ G
Sbjct: 103 QVDTLQRR-GIQARLLNSTQSPGQQESVMEEMAAG------------------------- 136
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
L+YV PER+ N F +V+ K ++ L VDEAH
Sbjct: 137 KLDLIYVAPERLR-NGRFLDVVP----KANVSL--------------------LAVDEAH 171
Query: 380 CV 381
CV
Sbjct: 172 CV 173
>gi|417304365|ref|ZP_12091388.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula baltica
WH47]
gi|327539317|gb|EGF25938.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula baltica
WH47]
Length = 1002
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A A DC ++PTGGGKSLCYQ D
Sbjct: 43 FGLKEFRPGQRDVVDALAAGTDCLCVMPTGGGKSLCYQLPSLAREGTTIVVSPLIALMKD 102
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL + GI A LNS Q+ Q +V++E+ G
Sbjct: 103 QVDTLQRR-GIQARLLNSTQSPGQQESVMEEMAAG------------------------- 136
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
L+YV PER+ N F +V+ K ++ L VDEAH
Sbjct: 137 KLDLIYVAPERLR-NGRFLDVVP----KANVSL--------------------LAVDEAH 171
Query: 380 CV 381
CV
Sbjct: 172 CV 173
>gi|390343347|ref|XP_786769.3| PREDICTED: ATP-dependent DNA helicase Q1 [Strongylocentrotus
purpuratus]
Length = 980
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 75/183 (40%), Gaps = 65/183 (35%)
Query: 219 VIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-------------------- 258
+FG + +RPLQ + AS++ +D +L+PTGGGKSLCYQ
Sbjct: 94 TVFGIKKYRPLQEKTMNASLSGRDVILLMPTGGGKSLCYQLPALVSKGFTLVVSPLLSLM 153
Query: 259 -DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD 317
DQ + L + G+ AT LNS V + Q+I
Sbjct: 154 EDQTMALE-EIGVNATVLNSNTPPESVKDVHR---------------QMIDA-------- 189
Query: 318 KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDE 377
+ KLLYVTPE+I ++ F + CL + + + +LT +DE
Sbjct: 190 RSELKLLYVTPEKIAKSKRF---MACLEK--AYKANLLTR---------------IAIDE 229
Query: 378 AHC 380
HC
Sbjct: 230 VHC 232
>gi|386743723|ref|YP_006216902.1| ATP-dependent DNA helicase RecQ [Providencia stuartii MRSN 2154]
gi|384480416|gb|AFH94211.1| ATP-dependent DNA helicase RecQ [Providencia stuartii MRSN 2154]
Length = 608
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 75/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG ++FRP Q +A + +DC VL+PTGGGKSLCYQ D
Sbjct: 21 FGYQSFRPGQEAVIRAILDNRDCLVLMPTGGGKSLCYQVPALVKEGVTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L GI A LNS QT QE R + L CA +
Sbjct: 81 QVDQLRLH-GIKAACLNSSQTA-------QEQRDVMAL--------------CA----EG 114
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ KLLYV PER++ + S++ S + +L VDEAH
Sbjct: 115 AIKLLYVAPERLLTDYFLSQL-------SSWNISLLA------------------VDEAH 149
Query: 380 CV 381
CV
Sbjct: 150 CV 151
>gi|186477594|ref|YP_001859064.1| ATP-dependent DNA helicase RecQ [Burkholderia phymatum STM815]
gi|184194053|gb|ACC72018.1| ATP-dependent DNA helicase RecQ [Burkholderia phymatum STM815]
Length = 615
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + A DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVSAGGDCLVLMPTGGGKSLCYQIPSLVRREAGLGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++AAA + LR+G +
Sbjct: 71 ALMQDQVAALT-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++L+ + ++ F
Sbjct: 112 -------DLLYVAPERLM-TPRFLDLLE------------------------RTRIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|302337379|ref|YP_003802585.1| ATP-dependent DNA helicase RecQ [Spirochaeta smaragdinae DSM 11293]
gi|301634564|gb|ADK79991.1| ATP-dependent DNA helicase RecQ [Spirochaeta smaragdinae DSM 11293]
Length = 601
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 72/182 (39%), Gaps = 70/182 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-------------DQIITL-- 264
+FG +F+ Q + A +A +D F +PTGGGKSLCYQ +I L
Sbjct: 11 VFGYSSFKANQKEVINAILAGRDLFAAMPTGGGKSLCYQIPALLFDGLTVVVSPLIALMK 70
Query: 265 -----NLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
L GIPA FLNS Q+ A + L +G +
Sbjct: 71 DQVDAALSLGIPAAFLNSSQSQEDATETYRRLYRGEI----------------------- 107
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PER+ + F+E L + ++ F VDEAH
Sbjct: 108 --KLLYLSPERLAVD-GFTERLAAFN------------------------VSLFAVDEAH 140
Query: 380 CV 381
C+
Sbjct: 141 CL 142
>gi|121609320|ref|YP_997127.1| ATP-dependent DNA helicase RecQ [Verminephrobacter eiseniae EF01-2]
gi|121553960|gb|ABM58109.1| ATP-dependent DNA helicase RecQ [Verminephrobacter eiseniae EF01-2]
Length = 622
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 73/187 (39%), Gaps = 72/187 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR Q + +A D VL+PTGGGKSLCYQ
Sbjct: 11 VFGYEQFRGPQQAIVEHVIAGGDALVLMPTGGGKSLCYQVPAIVRQQQGRGVGIVVSPLI 70
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L+ + G+ A FLNS Q+ Q V ++L+ G +
Sbjct: 71 ALMHDQVGALH-EAGVDAAFLNSTQSFEQTLEVERQLQTGAI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLY PER+ F +L L++ QRQL+ F
Sbjct: 112 -------TLLYAAPERL-NTPRFLGLLDGLYQ--------------------QRQLSLFA 143
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 144 IDEAHCV 150
>gi|110597180|ref|ZP_01385469.1| ATP-dependent DNA helicase, RecQ family:ATP-dependent DNA helicase
RecQ [Chlorobium ferrooxidans DSM 13031]
gi|110341371|gb|EAT59836.1| ATP-dependent DNA helicase, RecQ family:ATP-dependent DNA helicase
RecQ [Chlorobium ferrooxidans DSM 13031]
Length = 597
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 73/182 (40%), Gaps = 70/182 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITL--------------- 264
+FG R FRP Q + +A + K+D F ++PTGGGKSLCYQ + L
Sbjct: 4 VFGFREFRPNQEKIVRAILEKRDVFAVMPTGGGKSLCYQLPAVLLPGTCMVISPLIALMK 63
Query: 265 -----NLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
GI A FLNS Q + +V++EL LS
Sbjct: 64 DQVDGARANGIRAAFLNSSQLPEERESVMREL-----LSN-------------------- 98
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
S LLYV PER + F E+L G + + + V+DEAH
Sbjct: 99 SLDLLYVAPERFTFDH-FRELL------GRVNISMA------------------VIDEAH 133
Query: 380 CV 381
CV
Sbjct: 134 CV 135
>gi|449138839|ref|ZP_21774090.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula europaea
6C]
gi|448882613|gb|EMB13176.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula europaea
6C]
Length = 1002
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A A DC ++PTGGGKSLCYQ D
Sbjct: 43 FGLKEFRPGQRDVVDALAAGTDCLCVMPTGGGKSLCYQLPSLAREGTTIVVSPLIALMKD 102
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL + GI A LNS Q+ Q +V++E+ G
Sbjct: 103 QVDTLQRR-GIQARLLNSTQSPGQQESVMEEMAAG------------------------- 136
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
L+YV PER+ N F +V+ K ++ L VDEAH
Sbjct: 137 KLDLIYVAPERLR-NGRFLDVVP----KANVSL--------------------LAVDEAH 171
Query: 380 CV 381
CV
Sbjct: 172 CV 173
>gi|332667951|ref|YP_004450739.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
gi|332336765|gb|AEE53866.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
Length = 713
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 40/177 (22%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFG 269
LD + A FG FRPLQ + +A A +D VL+PTGGGKS+C+Q +T+
Sbjct: 3 LDKAKQALKRYFGYDQFRPLQAEIIRAIFAGKDALVLMPTGGGKSVCFQIPAVTM----- 57
Query: 270 IPATFLNSQQTVSQAAAVLQELRQGLVLS--QHYFLHQLI---FVLTCASRKDKPSCKLL 324
P T + VS +++++ +GL + Q FL+ I L + LL
Sbjct: 58 -PGTCV----VVSPLISLMKDQVEGLRANGIQAAFLNSAIDSREQLKVEESFYAGALNLL 112
Query: 325 YVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
YV+PE++V +F +LK +G I L F +DEAHC+
Sbjct: 113 YVSPEKLVSG-NFVSILK----RGKINL--------------------FAIDEAHCI 144
>gi|296115204|ref|ZP_06833845.1| putative ATP-dependent DNA helicase recQ [Gluconacetobacter
hansenii ATCC 23769]
gi|295978305|gb|EFG85042.1| putative ATP-dependent DNA helicase recQ [Gluconacetobacter
hansenii ATCC 23769]
Length = 623
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 72/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR LQ QA +A QDC VL+PTGGGKS+CYQ
Sbjct: 27 VFGFPDFRGLQQQAVDQVMAGQDCLVLMPTGGGKSVCYQVPALSRPGTGLVISPLIALMD 86
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A L+S+Q AA V +L G R D
Sbjct: 87 DQVAALR-QLGVNAGALHSEQEADDAARVRSDLASG--------------------RLD- 124
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+LYV+PER++ RL LT V+ +DEA
Sbjct: 125 ----ILYVSPERLLSPGMLE------------RLSRLTLSVI-------------AIDEA 155
Query: 379 HCV 381
HC+
Sbjct: 156 HCI 158
>gi|118579582|ref|YP_900832.1| ATP-dependent DNA helicase RecQ [Pelobacter propionicus DSM 2379]
gi|118502292|gb|ABK98774.1| ATP-dependent DNA helicase RecQ [Pelobacter propionicus DSM 2379]
Length = 714
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 74/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG +FRP Q + + VA +D F+++PTGGGKSLCYQ
Sbjct: 12 VFGYGSFRPPQREVIQRVVAGEDVFLVMPTGGGKSLCYQIPALHREGVAIVVSPLISLMK 71
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A NS T ++ AV ++L QG
Sbjct: 72 DQVDGL-VDAGVRAACYNSSLTAEESRAVSRQLAQG------------------------ 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER++ + L R G ++L + F +DEA
Sbjct: 107 -ELDLLYVAPERLL-------LPDFLERLGGLKLAL------------------FAIDEA 140
Query: 379 HCV 381
HC+
Sbjct: 141 HCI 143
>gi|238487580|ref|XP_002375028.1| RecQ family helicase MusN [Aspergillus flavus NRRL3357]
gi|317143477|ref|XP_001819502.2| recQ family helicase MusN [Aspergillus oryzae RIB40]
gi|220699907|gb|EED56246.1| RecQ family helicase MusN [Aspergillus flavus NRRL3357]
Length = 1524
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 27/166 (16%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIP---ATFLN 276
F R FR Q +A A+++ +D FVL+PTGGGKSLCYQ I+ G+ + L+
Sbjct: 699 FHLRGFRLNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSIVKSGTTRGVTIVISPLLS 758
Query: 277 SQQTVSQAAAVLQ-ELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQ 335
Q Q + Q E++ L+ + + + T +S + +LLY+TPE + NQ
Sbjct: 759 LMQ--DQVYHLRQLEIKAYLLNGETQKTERQWIMSTLSSSDAEGHIELLYITPEMVNKNQ 816
Query: 336 SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ L+ L+ + +LA V+DEAHCV
Sbjct: 817 TLIRNLERLNNR--------------------HRLARIVIDEAHCV 842
>gi|195019459|ref|XP_001984985.1| GH16802 [Drosophila grimshawi]
gi|193898467|gb|EDV97333.1| GH16802 [Drosophila grimshawi]
Length = 1110
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 69/185 (37%)
Query: 221 FGNRAFR-PLQHQACKASVAK-QDCFVLLPTGGGKSLCYQ-------------------- 258
FG+++F+ LQ QA K +V K QD +V +PTG GKSLC+Q
Sbjct: 22 FGHKSFKSELQQQAIKCAVKKKQDVYVSMPTGSGKSLCFQLPGLMCKDQLTIVFSPLLAL 81
Query: 259 --DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRK 316
DQI L K +PA LNS+ + + V+ +LR
Sbjct: 82 IKDQIDHL-AKLKVPADSLNSKMSSKERERVITDLRAI---------------------- 118
Query: 317 DKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
K + + LY+TPE+ + F ++L LH+ ++LA F VD
Sbjct: 119 -KTNIRFLYITPEQ-AATKFFQDLLHSLHK--------------------HKKLAYFAVD 156
Query: 377 EAHCV 381
EAHCV
Sbjct: 157 EAHCV 161
>gi|95930254|ref|ZP_01312992.1| ATP-dependent DNA helicase RecQ [Desulfuromonas acetoxidans DSM
684]
gi|95133717|gb|EAT15378.1| ATP-dependent DNA helicase RecQ [Desulfuromonas acetoxidans DSM
684]
Length = 598
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 73/183 (39%), Gaps = 74/183 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG R FR Q Q + +A QDCFVL+PTGGGKSLCYQ D
Sbjct: 11 FGFREFREPQQQIIETLIAGQDCFVLMPTGGGKSLCYQIPALHRQGVAIVVSPLISLMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQEL-RQGLVLSQHYFLHQLIFVLTCASRKDK 318
Q+ LN G+ A NS +A VL +L RQ L
Sbjct: 71 QVDALNAN-GVSAACYNSSLAAQEARDVLSQLHRQQL----------------------- 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER++ + L+ LH D+ ++A VDEA
Sbjct: 107 ---DLLYVAPERLLS----PDFLERLH------------DI---------KIALIAVDEA 138
Query: 379 HCV 381
HCV
Sbjct: 139 HCV 141
>gi|428778146|ref|YP_007169933.1| ATP-dependent DNA helicase RecQ [Halothece sp. PCC 7418]
gi|428692425|gb|AFZ45719.1| ATP-dependent DNA helicase RecQ [Halothece sp. PCC 7418]
Length = 709
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 74/193 (38%), Gaps = 68/193 (35%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------ 257
+ ++E A FG FRP Q +A ++D ++PTGGGKSLCY
Sbjct: 1 MSELETALKQYFGYETFRPGQKAIIEAVYQQRDVLAVMPTGGGKSLCYQLPALLKPGLAV 60
Query: 258 ---------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
QDQ+ TL K GI ATFLNS T +A + + G
Sbjct: 61 VVSPLIALMQDQVETLQ-KNGIAATFLNSSLTAEEARSRRLSILNG-------------- 105
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
KLLY+ PE++V S L+ + K + L
Sbjct: 106 -----------EMKLLYLAPEKLVSPAS-KTFLQAVQEKHGLSL---------------- 137
Query: 369 QLAGFVVDEAHCV 381
F +DEAHC+
Sbjct: 138 ----FAIDEAHCI 146
>gi|172036703|ref|YP_001803204.1| ATP-requiring DNA helicase [Cyanothece sp. ATCC 51142]
gi|354554517|ref|ZP_08973821.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. ATCC 51472]
gi|171698157|gb|ACB51138.1| ATP-requiring DNA helicase [Cyanothece sp. ATCC 51142]
gi|353553326|gb|EHC22718.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. ATCC 51472]
Length = 711
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 77/193 (39%), Gaps = 68/193 (35%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ----------- 258
+ +E A FG FR Q Q ++ +D V++PTGGGKSLC+Q
Sbjct: 5 FNSLENALKYFFGYDQFRSGQKQIINEALNNKDLLVIMPTGGGKSLCFQLPALLKSGVCI 64
Query: 259 ----------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
DQ+ TL L GI ATFLNS + + R+ +L
Sbjct: 65 VVSPLIALMQDQVDTL-LDNGIGATFLNSTLNREELQS-----RENAIL----------- 107
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
K KLLYV PER++ N +F L L +K
Sbjct: 108 ---------KGKIKLLYVAPERLL-NDNFLNFLDFLRQKVG------------------- 138
Query: 369 QLAGFVVDEAHCV 381
L+GF +DEAHCV
Sbjct: 139 -LSGFAIDEAHCV 150
>gi|448111284|ref|XP_004201806.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
gi|359464795|emb|CCE88500.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
Length = 1430
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+F ++FRP Q +A +++ +D FVL+PTGGGKSLCY
Sbjct: 744 LFHLKSFRPNQLEAIVSTLNGRDVFVLMPTGGGKSLCYQLPALISSGKTRGTTIVISPLI 803
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L I A ++S+ + ++ + L++ R G
Sbjct: 804 SLMQDQVQHL-LHKNIRAGMISSKGSAAERKSTLEQFRNG-------------------- 842
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
+L+Y++PE + +Q ++ L+ RQLA V
Sbjct: 843 -----ELQLVYLSPEMVNTSQHIQRIIARLYES--------------------RQLARVV 877
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 878 VDEAHCV 884
>gi|308188864|ref|YP_003932995.1| ATP-dependent DNA helicase RecQ [Pantoea vagans C9-1]
gi|308059374|gb|ADO11546.1| ATP-dependent DNA helicase RecQ [Pantoea vagans C9-1]
Length = 609
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 71/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q +++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQTIINEALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A +LNS T Q V+ + R G V
Sbjct: 81 QVDQL-LANGVAAAYLNSTMTRDQQQTVMADCRTGRV----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER++ + +F E L Q A VDEAH
Sbjct: 117 --KLLYIAPERLMMD-NFLESL------------------------AHWQPAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|254472207|ref|ZP_05085607.1| ATP-dependent DNA helicase RecQ [Pseudovibrio sp. JE062]
gi|211958490|gb|EEA93690.1| ATP-dependent DNA helicase RecQ [Pseudovibrio sp. JE062]
Length = 612
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 75/183 (40%), Gaps = 68/183 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG AFR Q + +A + C VL+PTG GKSLCY Q
Sbjct: 22 VFGYDAFRGNQQVVIDSVMAGESCCVLMPTGAGKSLCYQVPALCRRGVGIVVSPLIALMQ 81
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQI TL + G+ AT +NS + + A ++LR G
Sbjct: 82 DQIATLR-ELGVRATSINSALSYDEVQAAYRDLRAG------------------------ 116
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER+V ++ F +L+ L+++G I L +DEA
Sbjct: 117 -ELDLLYVAPERLVRSE-FVGLLEELNQRGLIAL--------------------LAIDEA 154
Query: 379 HCV 381
HC+
Sbjct: 155 HCI 157
>gi|390440423|ref|ZP_10228752.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
gi|389836165|emb|CCI32878.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
Length = 703
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 78/196 (39%), Gaps = 68/196 (34%)
Query: 207 LQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------- 257
+ A++ +E A FG FRP Q Q +A++ QD V++PTGGGKSLC+
Sbjct: 1 MAAIESLEKALKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKG 60
Query: 258 ------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQ 305
QDQ+ L GI ATFLNS Q R+ L+L
Sbjct: 61 VTVVVSPLIALMQDQVTAL-ADNGIGATFLNSTLNAKQVRE-----RESLIL-------- 106
Query: 306 LIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
+ KLLYV PER++ + SF + L +
Sbjct: 107 ------------QGKIKLLYVAPERLL-SPSFLDFLAVIDNYLG---------------- 137
Query: 366 CQRQLAGFVVDEAHCV 381
LA VDEAHCV
Sbjct: 138 ----LACLAVDEAHCV 149
>gi|67475629|ref|XP_653505.1| recQ family DNA helicase [Entamoeba histolytica HM-1:IMSS]
gi|56470462|gb|EAL48119.1| recQ family DNA helicase [Entamoeba histolytica HM-1:IMSS]
gi|449702365|gb|EMD43019.1| ATP-dependent DNA helicase recQ, putative [Entamoeba histolytica
KU27]
Length = 509
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 66/182 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
F ++FRP Q + +++ +D V++PTGGGKSLC+ Q+
Sbjct: 32 FNIQSFRPQQREIILSTLQHKDTLVIMPTGGGKSLCFQLQPVLTERITIVISPLIALMQN 91
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN K GI + LNS + S+A VL L P
Sbjct: 92 QVDGLN-KRGITSFILNSTLSKSEATKVLSILNSS-----------------------NP 127
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
LLYVTPE+I Q F ++K L+ SI ++L F VDEAH
Sbjct: 128 ELYLLYVTPEQI-KTQRFQNIMKKLY---SI-----------------KKLGMFAVDEAH 166
Query: 380 CV 381
C+
Sbjct: 167 CI 168
>gi|406997576|gb|EKE15607.1| hypothetical protein ACD_11C00117G0003 [uncultured bacterium]
Length = 719
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 73/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRPLQ + + + K+D FVL+PTGGGKSLCYQ D
Sbjct: 9 FGFDEFRPLQREIIENVLNKRDTFVLMPTGGGKSLCYQLPALKFPGITLVISPLIALMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L G+ A FLNS + + + +E+++G V
Sbjct: 69 QVDFLKAS-GVAAEFLNSSLSGDEIQRIQKEIKEGKV----------------------- 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K+LY+ PER+ N F L+ L K S+ VDEAH
Sbjct: 105 --KILYIAPERMASN-GFENFLQNL--KPSL----------------------IAVDEAH 137
Query: 380 CV 381
C+
Sbjct: 138 CI 139
>gi|406866234|gb|EKD19274.1| QDE3-like protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1765
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 51/178 (28%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
F + FR Q A A+++ QD FVL+PTGGGKSLCYQ +PA +NS +T
Sbjct: 895 FKLKGFRRHQIDAINATLSGQDAFVLMPTGGGKSLCYQ-----------LPA-VVNSGKT 942
Query: 281 --VSQAAAVLQELRQGLVLSQHYFLHQLIFV-------------LTCASRKDKPS--CKL 323
V+ + L L V QH + ++ + A R++ P +L
Sbjct: 943 RGVTLVISPLLSLMNDQV--QHLLVKKIQAATLNSDSPSEVKSDIWSALREENPEQYIQL 1000
Query: 324 LYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
LY+TPE I + L L++KG +LA V+DEAHCV
Sbjct: 1001 LYITPEMINKSPPMIAALTRLYKKG--------------------KLARIVIDEAHCV 1038
>gi|195082859|ref|XP_001997375.1| GH24741 [Drosophila grimshawi]
gi|193891438|gb|EDV90304.1| GH24741 [Drosophila grimshawi]
Length = 909
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 69/185 (37%)
Query: 221 FGNRAFR-PLQHQACKASVAK-QDCFVLLPTGGGKSLCYQ-------------------- 258
FG+++F+ LQ QA K +V K QD +V +PTG GKSLC+Q
Sbjct: 22 FGHKSFKSELQQQAIKCAVKKKQDVYVSMPTGSGKSLCFQLPGLMCKDQLTVVFSPLLAL 81
Query: 259 --DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRK 316
DQI L K +PA LNS+ + + V+ +L R
Sbjct: 82 IKDQIDHL-AKLKVPADSLNSKMSSKERERVITDL-----------------------RA 117
Query: 317 DKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
K + + LY+TPE+ + F ++L LH+ ++LA F VD
Sbjct: 118 IKTNIRFLYITPEQ-AATKFFQDLLHSLHK--------------------HKKLAYFAVD 156
Query: 377 EAHCV 381
EAHCV
Sbjct: 157 EAHCV 161
>gi|365119359|ref|ZP_09337481.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
gi|363648680|gb|EHL87834.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
Length = 709
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 72/182 (39%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
+G FR Q + ++ +DC VL+PTGGGKSLCYQ D
Sbjct: 16 YGYDTFRLQQAEIIDTIISGRDCLVLMPTGGGKSLCYQIPAIIKGGTTVVVSPLLALMKD 75
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL+ GIPA LNS Q ++ V R+G
Sbjct: 76 QVDTLDSN-GIPAAMLNSLQNETETVKVKIAARRG------------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLY++PER++G + L R+ +I L F +DEAH
Sbjct: 110 DLRLLYISPERLMGE------IDGLLREMNISL--------------------FAIDEAH 143
Query: 380 CV 381
C+
Sbjct: 144 CI 145
>gi|366995175|ref|XP_003677351.1| hypothetical protein NCAS_0G01110 [Naumovozyma castellii CBS 4309]
gi|342303220|emb|CCC70998.1| hypothetical protein NCAS_0G01110 [Naumovozyma castellii CBS 4309]
Length = 989
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 71/182 (39%)
Query: 225 AFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------------------QD 259
FRP Q +A ++++ +D FVL+PTGGGKSLCY QD
Sbjct: 350 GFRPNQLEAINSTLSGKDVFVLMPTGGGKSLCYQLPAVVKSGRTKGTTIVISPLISLMQD 409
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L I A+ ++S+ T Q +GL+
Sbjct: 410 QVAHL-LDLNIKASMISSKGTTQQRKQTFNLFVKGLL----------------------- 445
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
L+Y++PE I ++ ++ L+++G +LA VVDEAH
Sbjct: 446 --DLIYISPEMISASKQCKRAIQTLYQQG--------------------KLARIVVDEAH 483
Query: 380 CV 381
CV
Sbjct: 484 CV 485
>gi|404497566|ref|YP_006721672.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens GS-15]
gi|418065091|ref|ZP_12702466.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens RCH3]
gi|78195168|gb|ABB32935.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens GS-15]
gi|373562723|gb|EHP88930.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens RCH3]
Length = 601
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 68/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG R FRP Q + + D FVL+PTGGGKSLCYQ
Sbjct: 13 VFGYRTFRPFQEEIVTRLIGGGDAFVLMPTGGGKSLCYQIPAIHRPGVGIVVSPLISLMK 72
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ TL + G+ A NS +A VL L G
Sbjct: 73 DQVDTLR-ENGVAAAAYNSAMGEREARQVLARLHAG------------------------ 107
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER++ +F E L+ + +A F +DEA
Sbjct: 108 -ELDLLYVAPERLM-TDAFLERLREI------------------------PVALFAIDEA 141
Query: 379 HCV 381
HCV
Sbjct: 142 HCV 144
>gi|425444700|ref|ZP_18824746.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|425454418|ref|ZP_18834158.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
gi|389735511|emb|CCI01005.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|389804921|emb|CCI15689.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
Length = 703
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 77/196 (39%), Gaps = 68/196 (34%)
Query: 207 LQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------- 257
+ A+D +E FG FRP Q Q +A++ QD V++PTGGGKSLC+
Sbjct: 1 MAAIDSLEKVLKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKG 60
Query: 258 ------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQ 305
QDQ+ L GI ATFLNS Q R+ L+L
Sbjct: 61 VTVVVSPLIALMQDQVTAL-ADNGIGATFLNSTLNAKQVRE-----RESLIL-------- 106
Query: 306 LIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
+ KLLYV PER++ + SF + L +
Sbjct: 107 ------------QGKIKLLYVAPERLL-SPSFLDFLAVIDNYLG---------------- 137
Query: 366 CQRQLAGFVVDEAHCV 381
LA VDEAHCV
Sbjct: 138 ----LACLAVDEAHCV 149
>gi|430812018|emb|CCJ30545.1| unnamed protein product [Pneumocystis jirovecii]
Length = 704
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 76/191 (39%), Gaps = 65/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGI- 270
D+ F +FG FR Q +A + ++ +D F++ PTG GKSLCYQ I ++ I
Sbjct: 12 DISFTLRKVFGKPDFRGCQKEAIECALRGEDIFIIAPTGMGKSLCYQLPAIVVDHGVTIV 71
Query: 271 --------------------PATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
PA LNS ++ +L++L G
Sbjct: 72 VSPLLALMNNQVDILCAKNLPAATLNSTTSIENRKRILEDLACG---------------- 115
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE ++ ++F L +++ G +L
Sbjct: 116 -------HPQVRLLYVTPE-LLSTENFRNKLLNVYQHG--------------------EL 147
Query: 371 AGFVVDEAHCV 381
FV+DEAHCV
Sbjct: 148 HRFVIDEAHCV 158
>gi|148241552|ref|YP_001226709.1| ATP-dependent DNA helicase [Synechococcus sp. RCC307]
gi|147849862|emb|CAK27356.1| ATP-dependent DNA helicase [Synechococcus sp. RCC307]
Length = 530
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 75/168 (44%), Gaps = 40/168 (23%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQQ 279
FG FRP Q + +A + +DC +LPTG GKSLCYQ ++ + I Q
Sbjct: 16 FGYSDFRPGQREVVEALLEGRDCLAVLPTGAGKSLCYQLPALVRGGVVLVISPLVALMQD 75
Query: 280 TVSQ------AAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVG 333
V+Q AAA L GL L + L Q I + + +LLY+ PER+ G
Sbjct: 76 QVAQLRRRGIAAACLHN---GLPLQELRKLQQQI---------QQGTLRLLYLAPERLQG 123
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
++ ++L+ LH QRQL VDEAHC+
Sbjct: 124 -EACRQLLEDLHD--------------------QRQLVALAVDEAHCI 150
>gi|407004913|gb|EKE21161.1| Strongly similar to ATP-dependent DNA helicase, partial [uncultured
bacterium]
Length = 125
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 47/132 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRPLQ + +A +D FVL+PTGGGKSLCYQ D
Sbjct: 9 FGFEEFRPLQGEIISNILAGRDTFVLMPTGGGKSLCYQLPALKFPGITIVISPLIALMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L G+ A FLNS +V + + E+++G V
Sbjct: 69 QVDSLKAN-GVAAEFLNSSLSVGEIGKIKSEVQKGKV----------------------- 104
Query: 320 SCKLLYVTPERI 331
K+LY+ PER+
Sbjct: 105 --KILYIAPERM 114
>gi|332526902|ref|ZP_08402995.1| ATP-dependent DNA helicase RecQ [Rubrivivax benzoatilyticus JA2]
gi|332111344|gb|EGJ11328.1| ATP-dependent DNA helicase RecQ [Rubrivivax benzoatilyticus JA2]
Length = 634
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 73/187 (39%), Gaps = 72/187 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG AFR Q + + A D VL+PTGGGKSLCYQ
Sbjct: 18 VFGYTAFRGRQREIVEHVAAGGDALVLMPTGGGKSLCYQVPAILRHRAGQGVTVVVSPLI 77
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L+ + G+PA FLNS +A + +EL G ++
Sbjct: 78 ALMHDQVGALD-EVGVPAAFLNSTLDGDEARRIERELLAGRLV----------------- 119
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLY PERI+ F +L+ L + +LA F
Sbjct: 120 --------LLYAAPERIL-TPRFLAMLESLAERD--------------------RLALFA 150
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 151 IDEAHCV 157
>gi|91785471|ref|YP_560677.1| ATP-dependent DNA helicase RecQ [Burkholderia xenovorans LB400]
gi|91689425|gb|ABE32625.1| ATP-dependent DNA helicase RecQ [Burkholderia xenovorans LB400]
Length = 615
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 72/187 (38%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPSLVRRERGFGTGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++A A + LR+G
Sbjct: 71 ALMQDQVAALT-EVGVRAAYLNSTLSSAEAMATERALREG-------------------- 109
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F E+L+ + ++ F
Sbjct: 110 -----DIDLLYVAPERLM-TPRFQELLE------------------------RTRIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|119488495|ref|ZP_01621668.1| ATP-dependent DNA helicase RecQ [Lyngbya sp. PCC 8106]
gi|119455306|gb|EAW36446.1| ATP-dependent DNA helicase RecQ [Lyngbya sp. PCC 8106]
Length = 335
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 77/186 (41%), Gaps = 76/186 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG +FRP Q + + ++ ++D +++PTGGGKSLC+ QD
Sbjct: 23 FGYDSFRPGQREIIEQALQRRDLLIVMPTGGGKSLCFQLPALLKPGITVVVSPLIALMQD 82
Query: 260 QIITLNLKFGIPATFLNS----QQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
Q+I L GI A FLNS ++ S+ AA+L
Sbjct: 83 QVIALE-DNGIAANFLNSTLLPEELRSREAAIL--------------------------- 114
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
K KL+YV PER++G + S + DVV Q ++ F +
Sbjct: 115 --KGKIKLVYVAPERLLGERFLSFL-----------------DVV----NTQVGISAFAI 151
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 152 DEAHCV 157
>gi|317494839|ref|ZP_07953250.1| ATP-dependent DNA helicase RecQ [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917164|gb|EFV38512.1| ATP-dependent DNA helicase RecQ [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 612
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A++A +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQTIINAAIAGRDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L G+ A LNS Q Q V R G +
Sbjct: 81 QVDQLQAN-GVSAACLNSTQNREQQQEVYAGCRSGAI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER++ + + LPH LA VDEAH
Sbjct: 117 --KLLYIAPERLMMDNFLDQ----------------------LPHWNPSLLA---VDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|440298813|gb|ELP91444.1| DNA helicase hus2, putative [Entamoeba invadens IP1]
Length = 1361
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 83/194 (42%), Gaps = 40/194 (20%)
Query: 195 SDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKS 254
+D EH + +++E+ AL N FGN +FRP Q +++ + VL+PTGGGKS
Sbjct: 609 TDWEHTSFTWDEV-ALK----QNHNDFGNDSFRPSQKAIINCALSGHNTLVLMPTGGGKS 663
Query: 255 LCYQDQIITLNLKFGI-----PATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
LCYQ + L GI P L Q + + L+ + + F
Sbjct: 664 LCYQ---LASALMTGITVVISPLVSLIQDQVANLNSTSLENNVLAYYQGSDFEAGKRFF- 719
Query: 310 LTCASRKD--KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQ 367
A K KP KL+++TPERI + SF E L +
Sbjct: 720 ---AESKSVCKPKLKLVFLTPERIQLD-SFLEALDSYYN--------------------N 755
Query: 368 RQLAGFVVDEAHCV 381
R A VVDEAHCV
Sbjct: 756 RNFALIVVDEAHCV 769
>gi|386812206|ref|ZP_10099431.1| DNA helicase RecQ [planctomycete KSU-1]
gi|386404476|dbj|GAB62312.1| DNA helicase RecQ [planctomycete KSU-1]
Length = 714
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +F PLQ K +A++D FVL+PTGGGKSLCYQ D
Sbjct: 9 FGYTSFYPLQEDIIKEVLAQRDAFVLMPTGGGKSLCYQLPALLFSGVTIVVSPLIALMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L GIPA F+NS + S+ A RQ L+ ++
Sbjct: 69 QVDGL-LANGIPAIFINSSLSYSEIDAK----RQSLLNNE-------------------- 103
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K+LY+ PER+ + F + L+ L +++ F +DE+H
Sbjct: 104 -IKILYIAPERLFMPE-FLQFLQGL------------------------KISLFAIDESH 137
Query: 380 CV 381
C+
Sbjct: 138 CI 139
>gi|295102974|emb|CBL00518.1| ATP-dependent DNA helicase, RecQ family [Faecalibacterium
prausnitzii SL3/3]
Length = 525
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 73/185 (39%), Gaps = 76/185 (41%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG +FRP Q Q +A QD ++PTG GKS+CYQ
Sbjct: 11 VFGYDSFRPGQEQIVSRLLAGQDVLAVMPTGAGKSICYQVPALLLPGITIVVSPLVSLMK 70
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L ++ G+ A FLN+ T +Q A +L R+G
Sbjct: 71 DQVGAL-VQAGVAAAFLNNSLTDNQKALMLHRAREGWY---------------------- 107
Query: 319 PSCKLLYVTPERI--VGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
K++YV PER+ G Q F++ +RQ++ VD
Sbjct: 108 ---KIIYVAPERLEMPGFQRFAQ---------------------------ERQISMVTVD 137
Query: 377 EAHCV 381
EAHC+
Sbjct: 138 EAHCI 142
>gi|425441134|ref|ZP_18821420.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
gi|389718248|emb|CCH97777.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
Length = 703
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 77/196 (39%), Gaps = 68/196 (34%)
Query: 207 LQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------- 257
+ A+D +E FG FRP Q Q +A++ QD V++PTGGGKSLC+
Sbjct: 1 MAAIDSLEKVLKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKG 60
Query: 258 ------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQ 305
QDQ+ L GI ATFLNS Q R+ L+L
Sbjct: 61 VTVVVSPLIALMQDQVTAL-ADNGIGATFLNSTLNAKQVRE-----RESLIL-------- 106
Query: 306 LIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
+ KLLYV PER++ + SF + L +
Sbjct: 107 ------------QGKIKLLYVAPERLL-SPSFLDFLAVIDNYLG---------------- 137
Query: 366 CQRQLAGFVVDEAHCV 381
LA VDEAHCV
Sbjct: 138 ----LACLAVDEAHCV 149
>gi|300708803|ref|XP_002996574.1| hypothetical protein NCER_100319 [Nosema ceranae BRL01]
gi|239605886|gb|EEQ82903.1| hypothetical protein NCER_100319 [Nosema ceranae BRL01]
Length = 529
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 69/183 (37%), Gaps = 67/183 (36%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F FR Q K+ + K+D FVL+PTGGGKSLCYQ
Sbjct: 193 VFKLEKFRTNQESIIKSILEKKDVFVLMPTGGGKSLCYQIPALIDNGVTIIISPLLSLVH 252
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQI L + F NS S+ VL+ + G+V
Sbjct: 253 DQISNLLNNNILALPF-NSTLNASERRMVLENMTLGVV---------------------- 289
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
K+ YVTPE + N + LK L R +L+ FVVDEA
Sbjct: 290 ---KMFYVTPESLCANYNLESKLKELLR--------------------MNKLSRFVVDEA 326
Query: 379 HCV 381
HCV
Sbjct: 327 HCV 329
>gi|227509702|ref|ZP_03939751.1| ATP-dependent DNA helicase RecQ [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190852|gb|EEI70919.1| ATP-dependent DNA helicase RecQ [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 587
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 75/182 (41%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q +A ++ ++PTGGGKSLCYQ D
Sbjct: 11 FGYDSFRPGQQAVIDDILAHKNVLTIMPTGGGKSLCYQIPALLLKGVTLVVSPLIALMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN + GIPATF+NS + + +++R+G V
Sbjct: 71 QVDALN-ETGIPATFVNSTLSFEEIDERFEQVREGAV----------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV+PER+ + +FS+ L L D+V VDEAH
Sbjct: 107 --KLLYVSPERL-DSGAFSQ------------LASLPIDLV-------------AVDEAH 138
Query: 380 CV 381
C+
Sbjct: 139 CI 140
>gi|428210292|ref|YP_007094645.1| ATP-dependent DNA helicase RecQ [Chroococcidiopsis thermalis PCC
7203]
gi|428012213|gb|AFY90776.1| ATP-dependent DNA helicase RecQ [Chroococcidiopsis thermalis PCC
7203]
Length = 708
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 71/182 (39%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG +FRP Q Q + ++ +D +++PTGGGKSLC+ QD
Sbjct: 15 FGYDSFRPGQKQIVEQALQNRDQLIVMPTGGGKSLCFQLPALLQPGLTVVVSPLIALMQD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GI ATFLNS + Q + Q + G
Sbjct: 75 QVEALR-DNGIGATFLNSSLNLHQVRSREQAILSG------------------------- 108
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ N+ F L + K I A F +DEAH
Sbjct: 109 KTKLLYVAPERLL-NEKFLPFLDLIREKIGI--------------------AAFAIDEAH 147
Query: 380 CV 381
CV
Sbjct: 148 CV 149
>gi|300309830|ref|YP_003773922.1| ATP-dependent DNA helicase [Herbaspirillum seropedicae SmR1]
gi|300072615|gb|ADJ62014.1| ATP-dependent DNA helicase protein [Herbaspirillum seropedicae
SmR1]
Length = 618
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 71/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG +FR Q + + D VL+PTGGGKSLCY Q
Sbjct: 24 VFGYSSFRGHQGEIVQHVAGGGDALVLMPTGGGKSLCYQVPALLRQGTGVVISPLIALMQ 83
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L+ + G+ A FLNS Q+ +A + + LRQG
Sbjct: 84 DQVDALD-EVGVRAAFLNSTQSFDEAMQIERRLRQG------------------------ 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER++ +CL S R+ + F +DEA
Sbjct: 119 -DLDLLYVAPERLM-------TPRCLDLLESARISL------------------FAIDEA 152
Query: 379 HCV 381
HCV
Sbjct: 153 HCV 155
>gi|406933324|gb|EKD68008.1| hypothetical protein ACD_48C00110G0001, partial [uncultured
bacterium]
Length = 334
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 52/172 (30%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNS-QQ 279
FG +FRP+Q + +A + K+D VL+PTGGGKSLCYQ +PAT +
Sbjct: 14 FGFDSFRPMQEEIVQAVIEKKDVLVLMPTGGGKSLCYQ-----------LPATVQDGLTV 62
Query: 280 TVSQAAAVLQELRQGLVLS--QHYFL--------HQLIFVLTCASRKDKPSCKLLYVTPE 329
VS A++++ +GLV + + FL HQ I + ++ +LYV+PE
Sbjct: 63 VVSPLIALMKDQVEGLVANGIKAAFLNSSLELDEHQDI-----REQLERGDIDILYVSPE 117
Query: 330 RIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+++ +F LK K +++L F +DEAHC+
Sbjct: 118 KLI-TPNFQYSLK----KWNVQL--------------------FAIDEAHCI 144
>gi|365833970|ref|ZP_09375421.1| ATP-dependent DNA helicase RecQ [Hafnia alvei ATCC 51873]
gi|364570619|gb|EHM48223.1| ATP-dependent DNA helicase RecQ [Hafnia alvei ATCC 51873]
Length = 612
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A++A +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQTIINAAIAGRDCLVVMPTGGGKSLCYQIPALVMEGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L G+ A LNS Q Q V R G +
Sbjct: 81 QVDQLQAN-GVSAACLNSTQNREQQQEVYAGCRSGAI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER++ + + LPH LA VDEAH
Sbjct: 117 --KLLYIAPERLMMDNFLDQ----------------------LPHWNPALLA---VDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|448239974|ref|YP_007404027.1| ATP-dependent DNA helicase [Serratia marcescens WW4]
gi|445210338|gb|AGE16008.1| ATP-dependent DNA helicase [Serratia marcescens WW4]
Length = 614
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 69/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A++ QDC V++PTGGGKSLCYQ D
Sbjct: 25 FGYQQFRPGQQTIINAAIGGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 84
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A NS QT + V+ R G +
Sbjct: 85 QVDQL-LAYGVSAACYNSTQTREEQLDVMAGCRNGTI----------------------- 120
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K+LY+ PER++ S +L H LA VDEAH
Sbjct: 121 --KMLYIAPERLMMESFLS----------------------LLDHCPPAMLA---VDEAH 153
Query: 380 CV 381
C+
Sbjct: 154 CI 155
>gi|398793349|ref|ZP_10553767.1| ATP-dependent DNA helicase RecQ [Pantoea sp. YR343]
gi|398210961|gb|EJM97590.1| ATP-dependent DNA helicase RecQ [Pantoea sp. YR343]
Length = 608
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 69/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + +++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQNIIETALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS QT Q V + R G
Sbjct: 81 QVDQL-LANGVAAACLNSTQTREQQQQVFADCRTG------------------------- 114
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER++ L LH+ + L VDEAH
Sbjct: 115 KLKLLYIAPERLM----MDNFLDSLHQWNPVML---------------------AVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|407717397|ref|YP_006838677.1| ATP-dependent DNA helicase RecQ [Cycloclasticus sp. P1]
gi|407257733|gb|AFT68174.1| ATP-dependent DNA helicase RecQ [Cycloclasticus sp. P1]
Length = 704
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 69/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG AFR Q + +D FVL+PTGGGKSLCY QD
Sbjct: 12 FGYDAFREPQGEIIHELEQGRDAFVLMPTGGGKSLCYQIPAVLRDGTAIVVSPLIALMQD 71
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN + GI A +LNS V++A V +L G
Sbjct: 72 QVDALN-QLGIKAAYLNSTLNVAEAREVEAQLLNG------------------------- 105
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ LLYV PER++ S + +C +A F +DEAH
Sbjct: 106 ALDLLYVAPERLLNPIMLSLLERC-------------------------HIALFAIDEAH 140
Query: 380 CV 381
CV
Sbjct: 141 CV 142
>gi|253702373|ref|YP_003023562.1| ATP-dependent DNA helicase RecQ [Geobacter sp. M21]
gi|251777223|gb|ACT19804.1| ATP-dependent DNA helicase RecQ [Geobacter sp. M21]
Length = 599
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 75/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG ++FR QH+ + ++ +D FVL+PTGGGKSLCYQ
Sbjct: 12 VFGFKSFRSPQHEIVETVLSGRDAFVLMPTGGGKSLCYQIPALCFPGTALVVSPLISLMK 71
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + GI A NS ++A VL +L G
Sbjct: 72 DQVDALR-ENGISAACYNSALGEAEARRVLAQLHAG------------------------ 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PER++ + F E +K L SI L F +DEA
Sbjct: 107 -ELKLLYVAPERLLSD-GFLERIKPL----SISL--------------------FAIDEA 140
Query: 379 HCV 381
HCV
Sbjct: 141 HCV 143
>gi|291614340|ref|YP_003524497.1| ATP-dependent DNA helicase RecQ [Sideroxydans lithotrophicus ES-1]
gi|291584452|gb|ADE12110.1| ATP-dependent DNA helicase RecQ [Sideroxydans lithotrophicus ES-1]
Length = 614
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 73/182 (40%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG +FR Q + VA D VL+PTGGGKSLCY QD
Sbjct: 14 FGYASFRGAQQAIVEHVVAGGDALVLMPTGGGKSLCYQIPALMRKGVGIIVSPLIALMQD 73
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + G+ A FLNS +A V ++L + C
Sbjct: 74 QVDALK-QLGVSAAFLNSSLEAEEAREVSRQL------------------MRC------- 107
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ + F +L+ L++ +I L F +DEAH
Sbjct: 108 ELKLLYVAPERLL-TEGFLNLLERLNQDNNIAL--------------------FAIDEAH 146
Query: 380 CV 381
CV
Sbjct: 147 CV 148
>gi|443476000|ref|ZP_21065927.1| ATP-dependent DNA helicase RecQ [Pseudanabaena biceps PCC 7429]
gi|443019101|gb|ELS33248.1| ATP-dependent DNA helicase RecQ [Pseudanabaena biceps PCC 7429]
Length = 769
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 74/192 (38%), Gaps = 68/192 (35%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------ 258
D ++ A FG +FR Q + A +A +D ++PTGGGKS+C+Q
Sbjct: 32 DSLQQALKQYFGYESFRAGQREIIDAHLAGRDTLAIMPTGGGKSICFQLPALLKTGVTIV 91
Query: 259 ---------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
DQ+ L + GI ATFLNS + + Q + G +
Sbjct: 92 VSPLIALMQDQVTALK-ENGIGATFLNSTLSGRETNQRSQAILNGAI------------- 137
Query: 310 LTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
KL+YV PER+ Q F E L + K I
Sbjct: 138 ------------KLIYVAPERLFAEQ-FIEFLNIVKNKIGI------------------- 165
Query: 370 LAGFVVDEAHCV 381
AGF +DEAHCV
Sbjct: 166 -AGFAIDEAHCV 176
>gi|121600768|ref|YP_994462.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei SAVP1]
gi|121229578|gb|ABM52096.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei SAVP1]
Length = 763
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + A DC VL+PTGGGKSLCY
Sbjct: 159 VFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSEAGRGAGIVVSPLI 218
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR G +
Sbjct: 219 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALRDGDI------------------ 259
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++L+ + ++ F
Sbjct: 260 -------DLLYVAPERLM-TPRFLDLLE------------------------RARIGLFA 287
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 288 IDEAHCV 294
>gi|453064584|gb|EMF05549.1| ATP-dependent DNA helicase RecQ [Serratia marcescens VGH107]
Length = 610
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 71/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A++ QDC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQTIINAAIGGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A NS QT + V+ R G +
Sbjct: 81 QVDQL-LAYGVSAACYNSTQTREEQLDVMAGCRNGTI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K+LY+ PER++ +SF +L H LA VDEAH
Sbjct: 117 --KMLYIAPERLM-MESFLNLLD---------------------HCPPAMLA---VDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|449132273|ref|ZP_21768377.1| ATP-dependent DNA helicase RecQ [Rhodopirellula europaea 6C]
gi|448888483|gb|EMB18799.1| ATP-dependent DNA helicase RecQ [Rhodopirellula europaea 6C]
Length = 745
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 75/195 (38%)
Query: 211 DDMEFANVV---IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------- 258
++M+ A+ V ++G +FRPLQ A + + +D V+LPTGGGKSLCYQ
Sbjct: 19 NEMDRAHSVLRSVWGYDSFRPLQADAVQDVIQGRDSLVVLPTGGGKSLCYQVPALVRDGM 78
Query: 259 ------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
DQ+ L G+ A +NS Q+V Q + +R+G +
Sbjct: 79 SVVVSPLISLMKDQVDALTSN-GVSAALVNSTQSVEQKRETAERIRRGEI---------- 127
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
K+LY+ PER++ ++ + L+ L
Sbjct: 128 ---------------KILYLAPERLLTPKTL-DFLRSL---------------------- 149
Query: 367 QRQLAGFVVDEAHCV 381
++ F +DEAHCV
Sbjct: 150 --PISFFAIDEAHCV 162
>gi|76810512|ref|YP_335147.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1710b]
gi|76579965|gb|ABA49440.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1710b]
Length = 647
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + A DC VL+PTGGGKSLCY
Sbjct: 43 VFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSEAGRGAGIVVSPLI 102
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR G +
Sbjct: 103 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALRDGDI------------------ 143
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++L+ + ++ F
Sbjct: 144 -------DLLYVAPERLM-TPRFLDLLE------------------------RARIGLFA 171
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 172 IDEAHCV 178
>gi|383760482|ref|YP_005439468.1| ATP-dependent DNA helicase RecQ [Rubrivivax gelatinosus IL144]
gi|381381152|dbj|BAL97969.1| ATP-dependent DNA helicase RecQ [Rubrivivax gelatinosus IL144]
Length = 637
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 73/187 (39%), Gaps = 72/187 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG AFR Q + + A D VL+PTGGGKSLCYQ
Sbjct: 18 VFGYTAFRGRQREIVEHVAAGGDALVLMPTGGGKSLCYQVPAILRHRAGQGVTVVVSPLI 77
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L+ + G+PA FLNS +A + +EL G ++
Sbjct: 78 ALMHDQVGALD-EVGVPAAFLNSTLDGDEARRIERELLAGRLV----------------- 119
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLY PERI+ F +L+ L + +LA F
Sbjct: 120 --------LLYAAPERIL-TPRFLAMLESLAERD--------------------RLALFA 150
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 151 IDEAHCV 157
>gi|325570698|ref|ZP_08146424.1| ATP-dependent helicase RecQ [Enterococcus casseliflavus ATCC 12755]
gi|420264296|ref|ZP_14766929.1| ATP-dependent helicase RecQ [Enterococcus sp. C1]
gi|325156544|gb|EGC68724.1| ATP-dependent helicase RecQ [Enterococcus casseliflavus ATCC 12755]
gi|394768672|gb|EJF48578.1| ATP-dependent helicase RecQ [Enterococcus sp. C1]
Length = 588
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q ++ + +Q+ ++PTGGGKS+CYQ D
Sbjct: 12 FGYSQFREGQETIIQSILTQQNVLGIMPTGGGKSICYQLPALLLDGVTLVISPLISLMKD 71
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L + GIPA ++NS T +Q LQE RQG +
Sbjct: 72 QVDSL-VDMGIPAAYINSSLTGAQINQRLQEARQGRI----------------------- 107
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV+PER+ ++SF L+ Q +A VDEAH
Sbjct: 108 --KLLYVSPERL-DSESFRYSLR------------------------QMPIALLAVDEAH 140
Query: 380 CV 381
C+
Sbjct: 141 CI 142
>gi|167582628|ref|ZP_02375502.1| ATP-dependent DNA helicase RecQ [Burkholderia thailandensis TXDOH]
gi|167620742|ref|ZP_02389373.1| ATP-dependent DNA helicase RecQ [Burkholderia thailandensis Bt4]
gi|257137639|ref|ZP_05585901.1| ATP-dependent DNA helicase RecQ [Burkholderia thailandensis E264]
Length = 615
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + A DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSESGRGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR G +
Sbjct: 71 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALRDGDI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++L+ + ++ F
Sbjct: 112 -------DLLYVAPERLM-TPRFLDLLE------------------------RARIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|124384480|ref|YP_001027889.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei NCTC 10229]
gi|124292500|gb|ABN01769.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei NCTC 10229]
Length = 658
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + A DC VL+PTGGGKSLCY
Sbjct: 54 VFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSEAGRGAGIVVSPLI 113
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR G +
Sbjct: 114 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALRDGDI------------------ 154
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++L+ + ++ F
Sbjct: 155 -------DLLYVAPERLM-TPRFLDLLE------------------------RARIGLFA 182
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 183 IDEAHCV 189
>gi|257867932|ref|ZP_05647585.1| ATP-dependent DNA helicase RecQ [Enterococcus casseliflavus EC30]
gi|257874262|ref|ZP_05653915.1| ATP-dependent DNA helicase RecQ [Enterococcus casseliflavus EC10]
gi|257802015|gb|EEV30918.1| ATP-dependent DNA helicase RecQ [Enterococcus casseliflavus EC30]
gi|257808426|gb|EEV37248.1| ATP-dependent DNA helicase RecQ [Enterococcus casseliflavus EC10]
Length = 588
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q ++ + +Q+ ++PTGGGKS+CYQ D
Sbjct: 12 FGYSQFREGQETIIQSILTQQNVLGIMPTGGGKSICYQLPALLLDGVTLVISPLISLMKD 71
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L + GIPA ++NS T +Q LQE RQG +
Sbjct: 72 QVDSL-VDMGIPAAYINSSLTGAQINQRLQEARQGRI----------------------- 107
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV+PER+ ++SF L+ Q +A VDEAH
Sbjct: 108 --KLLYVSPERL-DSESFRYSLR------------------------QMPIALLAVDEAH 140
Query: 380 CV 381
C+
Sbjct: 141 CI 142
>gi|330815243|ref|YP_004358948.1| ATP-dependent DNA helicase RecQ [Burkholderia gladioli BSR3]
gi|327367636|gb|AEA58992.1| ATP-dependent DNA helicase RecQ [Burkholderia gladioli BSR3]
Length = 615
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVASGGDCLVLMPTGGGKSLCYQIPALVRHESGQGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++AAA + LR+G +
Sbjct: 71 ALMQDQVAALT-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++L+ + ++ F
Sbjct: 112 -------DLLYVAPERLM-TPRFLDLLE------------------------RTRIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|238025926|ref|YP_002910157.1| ATP-dependent DNA helicase RecQ [Burkholderia glumae BGR1]
gi|237875120|gb|ACR27453.1| ATP-dependent DNA helicase RecQ [Burkholderia glumae BGR1]
Length = 615
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 74/187 (39%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + A DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVSAGGDCLVLMPTGGGKSLCYQIPALVRHEAGQGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++AAA + LR+G
Sbjct: 71 ALMQDQVAALT-EVGVRAAYLNSTLSGAEAAATERALREG-------------------- 109
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++L+ + ++ F
Sbjct: 110 -----ELDLLYVAPERLM-TPRFLDLLE------------------------RTRIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|83718492|ref|YP_443578.1| ATP-dependent DNA helicase RecQ [Burkholderia thailandensis E264]
gi|83652317|gb|ABC36380.1| ATP-dependent DNA helicase RecQ [Burkholderia thailandensis E264]
Length = 644
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + A DC VL+PTGGGKSLCY
Sbjct: 40 VFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSESGRGAGIVVSPLI 99
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR G +
Sbjct: 100 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALRDGDI------------------ 140
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++L+ + ++ F
Sbjct: 141 -------DLLYVAPERLM-TPRFLDLLE------------------------RARIGLFA 168
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 169 IDEAHCV 175
>gi|386863477|ref|YP_006276426.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1026b]
gi|418534626|ref|ZP_13100465.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1026a]
gi|385358995|gb|EIF64975.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1026a]
gi|385660605|gb|AFI68028.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1026b]
Length = 615
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + A DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSEAGRGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR G +
Sbjct: 71 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALRDGDI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++L+ + ++ F
Sbjct: 112 -------DLLYVAPERLM-TPRFLDLLE------------------------RARIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|360043045|emb|CCD78457.1| putative blooms syndrome DNA helicase [Schistosoma mansoni]
Length = 881
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 78/200 (39%), Gaps = 82/200 (41%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTG-----------------GGKSLCYQ---- 258
+FG R+FR Q QA A++ +DCFV++PT GGKSLCYQ
Sbjct: 388 MFGLRSFRRNQLQAINAALLDRDCFVIMPTDITVMCASVHLFRSIVSRGGKSLCYQLPAV 447
Query: 259 -----------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHY 301
DQ+ L G+PA L + ++S+ V +
Sbjct: 448 VQSGLTVVISPLKALVLDQVTKLQ-SLGVPAAHLTGEASLSETDQV------------YT 494
Query: 302 FLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVV 361
LH L KLLYVTPE+I + L+ L+++
Sbjct: 495 ALHMANLRL-----------KLLYVTPEKIAASDKLKGCLEQLYKR-------------- 529
Query: 362 LPHTCQRQLAGFVVDEAHCV 381
++L FV+DEAHCV
Sbjct: 530 ------KRLDRFVIDEAHCV 543
>gi|304398161|ref|ZP_07380036.1| ATP-dependent DNA helicase RecQ [Pantoea sp. aB]
gi|440760554|ref|ZP_20939663.1| ATP-dependent DNA helicase RecQ [Pantoea agglomerans 299R]
gi|304354447|gb|EFM18819.1| ATP-dependent DNA helicase RecQ [Pantoea sp. aB]
gi|436425719|gb|ELP23447.1| ATP-dependent DNA helicase RecQ [Pantoea agglomerans 299R]
Length = 609
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 71/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q +++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQHFRPGQQTIIHQALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A +LNS T Q V+ + R G V
Sbjct: 81 QVDQL-LANGVAAAYLNSTMTRDQQQTVMADCRTGRV----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER++ + +F E L Q A VDEAH
Sbjct: 117 --KLLYIAPERLMMD-NFLESL------------------------AHWQPAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|53723860|ref|YP_104172.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei ATCC 23344]
gi|67640295|ref|ZP_00439107.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei GB8 horse 4]
gi|126441619|ref|YP_001060756.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 668]
gi|126448753|ref|YP_001082984.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei NCTC 10247]
gi|126454768|ref|YP_001068040.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1106a]
gi|134283152|ref|ZP_01769853.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 305]
gi|167003560|ref|ZP_02269346.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei PRL-20]
gi|167721582|ref|ZP_02404818.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei DM98]
gi|167740556|ref|ZP_02413330.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 14]
gi|167817761|ref|ZP_02449441.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 91]
gi|167826158|ref|ZP_02457629.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 9]
gi|167847670|ref|ZP_02473178.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei B7210]
gi|167896242|ref|ZP_02483644.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 7894]
gi|167904624|ref|ZP_02491829.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei NCTC
13177]
gi|167912889|ref|ZP_02499980.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 112]
gi|167920849|ref|ZP_02507940.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei BCC215]
gi|217424831|ref|ZP_03456328.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 576]
gi|237814152|ref|YP_002898603.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei MSHR346]
gi|242318091|ref|ZP_04817107.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1106b]
gi|254174750|ref|ZP_04881411.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei ATCC 10399]
gi|254180335|ref|ZP_04886933.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1655]
gi|254190298|ref|ZP_04896806.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei Pasteur
52237]
gi|254198524|ref|ZP_04904945.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei S13]
gi|254201243|ref|ZP_04907607.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei FMH]
gi|254206584|ref|ZP_04912935.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei JHU]
gi|254258378|ref|ZP_04949432.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1710a]
gi|254300574|ref|ZP_04968019.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 406e]
gi|254357123|ref|ZP_04973397.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei 2002721280]
gi|403520473|ref|YP_006654607.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei BPC006]
gi|418394508|ref|ZP_12968637.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 354a]
gi|418542174|ref|ZP_13107625.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1258a]
gi|418548697|ref|ZP_13113803.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1258b]
gi|418554635|ref|ZP_13119413.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 354e]
gi|52427283|gb|AAU47876.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei ATCC 23344]
gi|126221112|gb|ABN84618.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 668]
gi|126228410|gb|ABN91950.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1106a]
gi|126241623|gb|ABO04716.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei NCTC 10247]
gi|134245347|gb|EBA45440.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 305]
gi|147747137|gb|EDK54213.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei FMH]
gi|147752126|gb|EDK59192.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei JHU]
gi|148026187|gb|EDK84272.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei 2002721280]
gi|157810638|gb|EDO87808.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 406e]
gi|157937974|gb|EDO93644.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei Pasteur
52237]
gi|160695795|gb|EDP85765.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei ATCC 10399]
gi|169655264|gb|EDS87957.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei S13]
gi|184210874|gb|EDU07917.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1655]
gi|217392287|gb|EEC32312.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 576]
gi|237503436|gb|ACQ95754.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei MSHR346]
gi|238520989|gb|EEP84444.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei GB8 horse 4]
gi|242141330|gb|EES27732.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1106b]
gi|243060920|gb|EES43106.1| ATP-dependent DNA helicase RecQ [Burkholderia mallei PRL-20]
gi|254217067|gb|EET06451.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1710a]
gi|385356253|gb|EIF62379.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1258a]
gi|385357507|gb|EIF63562.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 1258b]
gi|385370015|gb|EIF75294.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 354e]
gi|385374909|gb|EIF79715.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei 354a]
gi|403076115|gb|AFR17695.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei BPC006]
Length = 615
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + A DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSEAGRGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR G +
Sbjct: 71 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALRDGDI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++L+ + ++ F
Sbjct: 112 -------DLLYVAPERLM-TPRFLDLLE------------------------RARIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|53720827|ref|YP_109813.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei K96243]
gi|52211241|emb|CAH37230.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei K96243]
Length = 644
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + A DC VL+PTGGGKSLCY
Sbjct: 40 VFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSEAGRGAGIVVSPLI 99
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR G +
Sbjct: 100 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALRDGDI------------------ 140
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++L+ + ++ F
Sbjct: 141 -------DLLYVAPERLM-TPRFLDLLE------------------------RARIGLFA 168
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 169 IDEAHCV 175
>gi|167838217|ref|ZP_02465076.1| ATP-dependent DNA helicase RecQ [Burkholderia thailandensis MSMB43]
gi|424907678|ref|ZP_18331149.1| ATP-dependent DNA helicase RecQ [Burkholderia thailandensis MSMB43]
gi|390926958|gb|EIP84375.1| ATP-dependent DNA helicase RecQ [Burkholderia thailandensis MSMB43]
Length = 615
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + A DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSEAGRGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR G +
Sbjct: 71 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALRDGDI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++L+ + ++ F
Sbjct: 112 -------DLLYVAPERLM-TPRFLDLLE------------------------RARIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|422007125|ref|ZP_16354111.1| ATP-dependent DNA helicase RecQ [Providencia rettgeri Dmel1]
gi|414097015|gb|EKT58670.1| ATP-dependent DNA helicase RecQ [Providencia rettgeri Dmel1]
Length = 608
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 72/187 (38%), Gaps = 82/187 (43%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG ++FRP Q A + K+DC VL+PTGGGKSLCYQ D
Sbjct: 21 FGYQSFRPGQDAVIGAILDKRDCLVLMPTGGGKSLCYQVPALVKEGVTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS QT + +++ QG +
Sbjct: 81 QVDQLRLH-GVNAACLNSSQTSQEQRQIMELCSQGEI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGF-----V 374
KLLYV PER++ + S QLAG+
Sbjct: 117 --KLLYVAPERLLTDYFLS------------------------------QLAGWNITLLA 144
Query: 375 VDEAHCV 381
VDEAHC+
Sbjct: 145 VDEAHCI 151
>gi|403173011|ref|XP_003332116.2| hypothetical protein PGTG_13483 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170091|gb|EFP87697.2| hypothetical protein PGTG_13483 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1231
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 37/179 (20%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI 270
D+ A V IF +R Q A +++ +DCFVL+PTGGGKSLCYQ ++ + G+
Sbjct: 453 DVGKALVKIFKLHTWRHNQIDAINTTLSGKDCFVLMPTGGGKSLCYQLPAVVRSGVTKGV 512
Query: 271 PATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD--------KPSCK 322
T + +S +++ + Q L ++H +T R++ P+
Sbjct: 513 --TIV-----ISPLISLITDQVQALC-AKHIGAAAFTGSMTAQERENVMNDLRSVDPALC 564
Query: 323 LLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L+YVTPE I+ + S +L L + + LA FV DEAHCV
Sbjct: 565 LVYVTPEMIMRSSVLSNILTDLKNR--------------------KLLARFVFDEAHCV 603
>gi|67924781|ref|ZP_00518182.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Crocosphaera watsonii WH 8501]
gi|416405865|ref|ZP_11687987.1| ATP-dependent DNA helicase RecQ [Crocosphaera watsonii WH 0003]
gi|67853376|gb|EAM48734.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Crocosphaera watsonii WH 8501]
gi|357261215|gb|EHJ10512.1| ATP-dependent DNA helicase RecQ [Crocosphaera watsonii WH 0003]
Length = 710
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 73/182 (40%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG FRP Q Q ++ +D V++PTGGGKSLC+ QD
Sbjct: 16 FGYDQFRPGQKQIITEALNNKDLLVIMPTGGGKSLCFQLPALLKPGLCIVVSPLIALMQD 75
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L L GI ATFLNS + Q + + G +
Sbjct: 76 QVDSL-LDNGIGATFLNSTLSREQLKSRENSILNGKI----------------------- 111
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ N SF L L++K L+ F +DEAH
Sbjct: 112 --KLLYVAPERLL-NDSFLNFLDFLNQKIG--------------------LSSFAIDEAH 148
Query: 380 CV 381
CV
Sbjct: 149 CV 150
>gi|407040860|gb|EKE40365.1| recQ family DNA helicase [Entamoeba nuttalli P19]
Length = 508
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 66/182 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
F ++FRP Q + +++ +D V++PTGGGKSLC+ Q+
Sbjct: 32 FNIQSFRPQQREIILSTLQHKDTLVIMPTGGGKSLCFQLQPVLTERITIVISPLIALMQN 91
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN K GI + LNS + S+A VL L P
Sbjct: 92 QVDGLN-KRGITSFILNSTLSKSEATKVLSILNSS-----------------------NP 127
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
LLYVTPE+I Q F ++K L+ ++L F VDEAH
Sbjct: 128 ELYLLYVTPEQI-KTQRFQNIMKKLY--------------------SVKKLGMFAVDEAH 166
Query: 380 CV 381
C+
Sbjct: 167 CI 168
>gi|392546619|ref|ZP_10293756.1| ATP-dependent DNA helicase [Pseudoalteromonas rubra ATCC 29570]
Length = 604
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 71/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q +A + +D VLLPTGGGKSLCY Q
Sbjct: 19 VFGYSDFRDGQLDVIQACLDGRDSLVLLPTGGGKSLCYQVPALILPGTCVVVSPLISLMQ 78
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L GI A F+N+ +Q A+ Q L QG +
Sbjct: 79 DQVAQLQ-ALGISAEFINNSLDRAQQQAIYQRLHQGEI---------------------- 115
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PE+I+ ++ F E L L QL F +DEA
Sbjct: 116 ---KLLYVAPEKILQSE-FIERLSHL------------------------QLGLFAIDEA 147
Query: 379 HCV 381
HCV
Sbjct: 148 HCV 150
>gi|428173190|gb|EKX42094.1| BLM RecQ DNA helicase family member, partial [Guillardia theta
CCMP2712]
Length = 412
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 29/169 (17%)
Query: 217 NVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-PATF 274
N +F N +FR Q + ++ DCFVL+PTGGGKSLCYQ +++ + I P
Sbjct: 13 NKHVFRNPSFRKHQEEIINTILSGHDCFVLMPTGGGKSLCYQLPALMSPGVTIVISPLVS 72
Query: 275 LNSQQTVSQAAAVLQELRQG-LVLSQHYFLHQLIFVLTC-ASRKDKPSCKLLYVTPERIV 332
L Q + L LR G +S + + +L + +C K+ +C+L+Y+TPE+
Sbjct: 73 LMHDQVYN-----LNLLRIGAYCISANTPMSELEEMYSCLRGVKEGINCQLIYITPEKFA 127
Query: 333 GNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+Q ++ + G +L+ ++DEAHCV
Sbjct: 128 HSQRLQNEMQRSFQNG--------------------KLSRIIIDEAHCV 156
>gi|226198145|ref|ZP_03793716.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei Pakistan
9]
gi|225929665|gb|EEH25681.1| ATP-dependent DNA helicase RecQ [Burkholderia pseudomallei Pakistan
9]
Length = 670
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + A DC VL+PTGGGKSLCY
Sbjct: 66 VFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSEAGRGAGIVVSPLI 125
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR G +
Sbjct: 126 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALRDGDI------------------ 166
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++L+ + ++ F
Sbjct: 167 -------DLLYVAPERLM-TPRFLDLLE------------------------RARIGLFA 194
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 195 IDEAHCV 201
>gi|194747940|ref|XP_001956407.1| GF25191 [Drosophila ananassae]
gi|190623689|gb|EDV39213.1| GF25191 [Drosophila ananassae]
Length = 1091
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 77/185 (41%), Gaps = 69/185 (37%)
Query: 221 FGNRAFR-PLQHQACKASVAK-QDCFVLLPTGGGKSLCYQ-------------------- 258
FG+ F+ LQ +A + +V K QD +V +PTG GKSLC+Q
Sbjct: 15 FGHSKFKSELQQKAVECAVKKKQDVYVSMPTGSGKSLCFQLPGLMCENQITIVFSPLLAL 74
Query: 259 --DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRK 316
DQI L K +PA LNS+ + + V+ +LR
Sbjct: 75 IKDQIDHLT-KLKVPADSLNSKMSTKERDRVIMDLRAV---------------------- 111
Query: 317 DKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
K + + LY+TPE+ + F E+L LH+ ++LA F VD
Sbjct: 112 -KTTLRFLYITPEQ-AATKFFQELLHTLHK--------------------HKKLAYFAVD 149
Query: 377 EAHCV 381
EAHCV
Sbjct: 150 EAHCV 154
>gi|374328402|ref|YP_005078586.1| DNA helicase, ATP-dependent, RecQ type, bacterial [Pseudovibrio sp.
FO-BEG1]
gi|359341190|gb|AEV34564.1| DNA helicase, ATP-dependent, RecQ type, bacterial [Pseudovibrio sp.
FO-BEG1]
Length = 612
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 73/183 (39%), Gaps = 68/183 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG AFR Q + +A + C VL+PTG GKSLCY Q
Sbjct: 22 VFGYDAFRGNQQVVIDSVMAGESCCVLMPTGAGKSLCYQVPALCRRGVGIVVSPLIALMQ 81
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQI TL + G+ AT +NS + + A ++LR G
Sbjct: 82 DQIATLR-ELGVRATSINSALSYDEVQAAYRDLRAG------------------------ 116
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER+V F +L+ L+++G I L +DEA
Sbjct: 117 -ELDLLYVAPERLV-RPEFVGLLEELNQRGLIAL--------------------LAIDEA 154
Query: 379 HCV 381
HC+
Sbjct: 155 HCI 157
>gi|156084252|ref|XP_001609609.1| ATP-dependent DNA helicase, RecQ family protein [Babesia bovis]
gi|154796861|gb|EDO06041.1| ATP-dependent DNA helicase, RecQ family protein [Babesia bovis]
Length = 1325
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 26/172 (15%)
Query: 213 MEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITL---NLKFG 269
+E N +FG +FR +Q A A + +DCFV++ TGGGKS CYQ + L + F
Sbjct: 539 VEEINRTVFGYTSFRGVQLAAINAILLNRDCFVMMATGGGKSHCYQLPSMLLCGVVVVFS 598
Query: 270 IPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPE 329
+ + Q + ++ + E S + IF ++ + S +L++TPE
Sbjct: 599 PLISLMEDQMRILRSYGIDAETVTANTSSGEL---RDIFEYYLSADHNFESGAILFITPE 655
Query: 330 RIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ + + +L LH G ++L FV+DEAHCV
Sbjct: 656 KFDKSITLVRLLGELHDAGRLKL--------------------FVIDEAHCV 687
>gi|271502372|ref|YP_003335398.1| ATP-dependent DNA helicase RecQ [Dickeya dadantii Ech586]
gi|270345927|gb|ACZ78692.1| ATP-dependent DNA helicase RecQ [Dickeya dadantii Ech586]
Length = 614
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 55/132 (41%), Gaps = 47/132 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A++ +DC V++PTGGGKSLCYQ D
Sbjct: 26 FGYQQFRPGQQDIINAAINGRDCLVIMPTGGGKSLCYQIPALVLDGLTLVVSPLISLMKD 85
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L +G+ A LNS Q+ Q AV R+G
Sbjct: 86 QVDQLQ-AYGVAAACLNSTQSREQQQAVFNACRRG------------------------- 119
Query: 320 SCKLLYVTPERI 331
KLLY+ PER+
Sbjct: 120 ELKLLYIAPERL 131
>gi|358387252|gb|EHK24847.1| hypothetical protein TRIVIDRAFT_212358 [Trichoderma virens Gv29-8]
Length = 1658
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 71/167 (42%), Gaps = 29/167 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATF 274
F + FR Q +A A++A D FVL+PTGGGKSLCYQ ++ G+ P
Sbjct: 778 FRMKGFRQNQLEAINATLAGDDAFVLMPTGGGKSLCYQLPAVVKSGRTRGVTIVVSPLLS 837
Query: 275 LNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGN 334
L Q A +Q + S Y Q++ R + +LLYVTPE +
Sbjct: 838 LMQDQVDHMKALGIQAVAFNSECSPEY-KRQVMSAFN--ERNPEHFIELLYVTPEMASKS 894
Query: 335 QSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F L+ L+R R+ A V+DEAHCV
Sbjct: 895 PQFMNALQSLYRS--------------------RKFARIVIDEAHCV 921
>gi|428302021|ref|YP_007140327.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 6303]
gi|428238565|gb|AFZ04355.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 6303]
Length = 724
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 72/182 (39%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG FR Q + + ++ +D V++PTGGGKSLC+ QD
Sbjct: 15 FGYDNFRLGQREIIEEALQNKDLMVVMPTGGGKSLCFQLPALMKKGVTIVVSPLIALMQD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL K GI ATFLNS Q + Q + +G V
Sbjct: 75 QVETLR-KNGIAATFLNSSLNSYQVRSREQAILEGKV----------------------- 110
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KL+YV PER+V + + H+ G +AGF +DEAH
Sbjct: 111 --KLVYVAPERLVSERFLPFLDLVNHQVG---------------------IAGFAIDEAH 147
Query: 380 CV 381
CV
Sbjct: 148 CV 149
>gi|406027740|ref|YP_006726572.1| ATP-dependent DNA helicase RecQ [Lactobacillus buchneri CD034]
gi|405126229|gb|AFS00990.1| ATP-dependent DNA helicase RecQ [Lactobacillus buchneri CD034]
Length = 592
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 72/182 (39%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q +A Q+ ++PTGGGKSLCYQ D
Sbjct: 11 FGYDSFRPGQQTVIDDILAHQNVLTIMPTGGGKSLCYQIPAMLEDGLTLVVSPLIALMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN + GIPATF+NS + Q+ R G V
Sbjct: 71 QVDALN-ETGIPATFINSSLDFDEIDERFQQARDGEV----------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV+PER+ + +F+ RL L D+V VDEAH
Sbjct: 107 --KLLYVSPERL-DSGAFN------------RLASLPIDLV-------------AVDEAH 138
Query: 380 CV 381
C+
Sbjct: 139 CI 140
>gi|167571568|ref|ZP_02364442.1| ATP-dependent DNA helicase RecQ [Burkholderia oklahomensis C6786]
Length = 615
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + A DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRNEAGCGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR G +
Sbjct: 71 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALRDGDI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++L+ + ++ F
Sbjct: 112 -------DLLYVAPERLM-TPRFLDLLE------------------------RARIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|21227319|ref|NP_633241.1| ATP-dependent DNA helicase [Methanosarcina mazei Go1]
gi|20905673|gb|AAM30913.1| ATP-dependent DNA helicase [Methanosarcina mazei Go1]
Length = 896
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG AFRPLQ + + + ++D FVL+PTGGGKS+CYQ D
Sbjct: 33 FGYTAFRPLQEEIIRDVLDRKDVFVLMPTGGGKSICYQLPSLLLDGVTVVVSPLISLMKD 92
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GI A +NS Q+ + V ++ FL +
Sbjct: 93 QVDGLEAN-GIAAACMNSTQSPRENRDV-----------KNAFLENRL------------ 128
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K+LY+ PER++ +F+ +KG + L F +DEAH
Sbjct: 129 --KVLYIAPERLMMPGTFA-----FLKKGKVSL--------------------FAIDEAH 161
Query: 380 CV 381
C+
Sbjct: 162 CI 163
>gi|349687060|ref|ZP_08898202.1| ATP-dependent DNA helicase RecQ [Gluconacetobacter oboediens
174Bp2]
Length = 611
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 73/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR LQ QA +A +DC VL+PTGGGKS+CYQ
Sbjct: 18 VFGFPDFRGLQQQAVDEVMAGRDCLVLMPTGGGKSVCYQVPALARPGTGLVISPLIALMD 77
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A L+S+Q AA V +L A R D
Sbjct: 78 DQVAALR-QLGVNAGALHSEQEADDAARVRADL--------------------MAGRLD- 115
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+LYV+PER++ L R G + L V+ +DEA
Sbjct: 116 ----ILYVSPERLLSP-------GMLERLGRLTLSVIA------------------IDEA 146
Query: 379 HCV 381
HC+
Sbjct: 147 HCI 149
>gi|78064918|ref|YP_367687.1| ATP-dependent DNA helicase RecQ [Burkholderia sp. 383]
gi|77965663|gb|ABB07043.1| ATP-dependent DNA helicase RecQ [Burkholderia sp. 383]
Length = 615
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 72/187 (38%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++AAA + LR+G +
Sbjct: 71 ALMQDQVAALR-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + L + R ++ F
Sbjct: 112 -------DLLYVAPERLMTGR----FLDLIERA---------------------KIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|343083870|ref|YP_004773165.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
gi|342352404|gb|AEL24934.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
Length = 709
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 69/184 (37%), Gaps = 72/184 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+G +FR Q + + K+DC L+PTG GKS+CYQ
Sbjct: 10 FYGYDSFRGQQESVIRQVIEKKDCIALMPTGAGKSVCYQVPAMVLPGLTLVISPLIALMK 69
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ LN + GIPA FLNS +S+ Q Y Q + K
Sbjct: 70 DQVDALN-EIGIPAAFLNSTMDISE---------------QRYVSDQAM----------K 103
Query: 319 PSCKLLYVTPERIV-GNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDE 377
KLLYV PER+ G LK ++ L+ VDE
Sbjct: 104 GGIKLLYVAPERLFSGTHPLVNALKEMN------------------------LSLVAVDE 139
Query: 378 AHCV 381
AHCV
Sbjct: 140 AHCV 143
>gi|167564422|ref|ZP_02357338.1| ATP-dependent DNA helicase RecQ [Burkholderia oklahomensis EO147]
Length = 615
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + A DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRNEAGCGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR G +
Sbjct: 71 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALRDGDI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++L+ + ++ F
Sbjct: 112 -------DLLYVAPERLM-TPRFLDLLE------------------------RARIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|167540323|ref|XP_001741831.1| ATP-dependent DNA helicase recQ [Entamoeba dispar SAW760]
gi|165893416|gb|EDR21673.1| ATP-dependent DNA helicase recQ, putative [Entamoeba dispar SAW760]
Length = 508
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 66/182 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
F ++FRP Q + +++ +D V++PTGGGKSLC+ Q+
Sbjct: 32 FNIQSFRPQQREIILSTLQHKDTVVIMPTGGGKSLCFQLQPVLTERITIVISPLIALMQN 91
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN K GI + LNS + S+A VL L P
Sbjct: 92 QVDGLN-KRGITSFILNSTLSKSEATKVLSLLNSS-----------------------NP 127
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
LLYVTPE+I Q F ++K L+ SI ++L F VDEAH
Sbjct: 128 ELYLLYVTPEQI-KTQRFQNIMKKLY---SI-----------------KKLGMFAVDEAH 166
Query: 380 CV 381
C+
Sbjct: 167 CI 168
>gi|430814293|emb|CCJ28450.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1066
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 69/187 (36%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG + FR Q +A +++ +D F+L+PTGGGKSLCY
Sbjct: 505 VFGLKEFRNNQLEAINTTLSGKDLFLLMPTGGGKSLCYQLPSLIDSGKTKGLTLVVSPLI 564
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L I + +N + + S+ +++ L +
Sbjct: 565 SLMQDQVEHL-LDININSASINGETSSSKRKEIVKMLYSNDIY----------------- 606
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
KLLYVTPE + N SF++ L ++ K + A V
Sbjct: 607 ------IKLLYVTPEFLAKNNSFNQALDHIYSKN--------------------KFARVV 640
Query: 375 VDEAHCV 381
VDEAHC+
Sbjct: 641 VDEAHCI 647
>gi|443668675|ref|ZP_21134223.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa DIANCHI905]
gi|159029588|emb|CAO90247.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330750|gb|ELS45444.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa DIANCHI905]
Length = 701
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 77/196 (39%), Gaps = 68/196 (34%)
Query: 207 LQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------- 257
+ A+D +E FG FRP Q Q +A++ QD V++PTGGGKSLC+
Sbjct: 1 MAAIDSLEKVLKYHFGYDQFRPNQRQIIEAALNNQDLLVIMPTGGGKSLCFQLPALIKKG 60
Query: 258 ------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQ 305
QDQ+ L GI ATFLNS Q R+ L+L
Sbjct: 61 VTVVVSPLIALMQDQVTAL-ADNGIGATFLNSTLNAKQVRD-----RESLIL-------- 106
Query: 306 LIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
+ KLLYV PER++ + SF + L +
Sbjct: 107 ------------QGKIKLLYVAPERLL-SPSFLDFLAVIDNYLG---------------- 137
Query: 366 CQRQLAGFVVDEAHCV 381
LA VDEAHCV
Sbjct: 138 ----LACLAVDEAHCV 149
>gi|170696806|ref|ZP_02887912.1| ATP-dependent DNA helicase RecQ [Burkholderia graminis C4D1M]
gi|170138284|gb|EDT06506.1| ATP-dependent DNA helicase RecQ [Burkholderia graminis C4D1M]
Length = 644
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 72/187 (38%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 40 VFGYPAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPSLVRREGGFGTGIVVSPLI 99
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++A A + LR G +
Sbjct: 100 ALMQDQVAALT-EVGVRAAYLNSTLSSAEAMATERALRDGEI------------------ 140
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F E+L+ + ++ F
Sbjct: 141 -------DLLYVAPERLM-TPRFQELLE------------------------RTRIGLFA 168
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 169 IDEAHCV 175
>gi|113476788|ref|YP_722849.1| ATP-dependent DNA helicase RecQ [Trichodesmium erythraeum IMS101]
gi|110167836|gb|ABG52376.1| ATP-dependent DNA helicase RecQ [Trichodesmium erythraeum IMS101]
Length = 731
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG +FRP Q Q + ++ ++D +++PTGGGKSLC+ QD
Sbjct: 22 FGYDSFRPGQKQIIQTALQQKDLLIIMPTGGGKSLCFQMPALLKPGLTIVVSPLISLMQD 81
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L GI ATFLNS +++ ++ G +
Sbjct: 82 QVESLK-DNGIAATFLNSTLDLTETRRRSTDIILGKI----------------------- 117
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ ++ F E L+ + + Q+ ++ F +DEAH
Sbjct: 118 --KLLYVAPERLL-SEKFLEFLELI--------------------SSQQGISTFAIDEAH 154
Query: 380 CV 381
CV
Sbjct: 155 CV 156
>gi|307731261|ref|YP_003908485.1| ATP-dependent DNA helicase RecQ [Burkholderia sp. CCGE1003]
gi|307585796|gb|ADN59194.1| ATP-dependent DNA helicase RecQ [Burkholderia sp. CCGE1003]
Length = 615
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 73/187 (39%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVASGGDCLVLMPTGGGKSLCYQIPSLVRRERGLGTGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++A A + LR G +
Sbjct: 71 ALMQDQVAALT-EVGVRAAYLNSTLSSAEAMATERALRDGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F E+L+ + ++ F
Sbjct: 112 -------DLLYVAPERLL-TPRFQELLE------------------------RTRIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|425461242|ref|ZP_18840722.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9808]
gi|389825935|emb|CCI23927.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9808]
Length = 701
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 77/196 (39%), Gaps = 68/196 (34%)
Query: 207 LQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------- 257
+ A+D +E FG FRP Q Q +A++ QD V++PTGGGKSLC+
Sbjct: 1 MAAIDSLEKVLKYHFGYDQFRPNQRQIIEAALNDQDLLVIMPTGGGKSLCFQLPALIKKG 60
Query: 258 ------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQ 305
QDQ+ L GI ATFLNS Q R+ L+L
Sbjct: 61 VTVVVSPLIALMQDQVTAL-ADNGIGATFLNSTLNAKQVRD-----RESLIL-------- 106
Query: 306 LIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
+ KLLYV PER++ + SF + L +
Sbjct: 107 ------------QGKIKLLYVAPERLL-SPSFLDFLAVIDNYLG---------------- 137
Query: 366 CQRQLAGFVVDEAHCV 381
LA VDEAHCV
Sbjct: 138 ----LACLAVDEAHCV 149
>gi|255037625|ref|YP_003088246.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
gi|254950381|gb|ACT95081.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
Length = 717
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 72/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q + +A +DC VL+PTGGGKS+C+Q D
Sbjct: 13 FGYDSFRPQQSEIIDTIMANRDCMVLMPTGGGKSVCFQIPAVLRDGLTIVISPLIALMKD 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GI A FLNS + ++ ++ ++R G
Sbjct: 73 QVEALRGN-GINAAFLNSTISGAEQDQIMWQIRLG------------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER+ +F L R+ ++ L F +DE+H
Sbjct: 107 ELKLLYIAPERLFAGNTFD-----LLREWNVTL--------------------FAIDESH 141
Query: 380 CV 381
C+
Sbjct: 142 CI 143
>gi|168700649|ref|ZP_02732926.1| ATP-dependent DNA helicase RecQ [Gemmata obscuriglobus UQM 2246]
Length = 741
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
+G + RPLQ A +A + ++D V+LPTGGGKSLC+Q D
Sbjct: 19 WGFASLRPLQEHAIRAVLNRRDSLVVLPTGGGKSLCFQAPAVVQGGLTIVVSPLIALMKD 78
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + G+PA L+S T ++ AA + +R G
Sbjct: 79 QVDGLT-RIGVPAARLDSTLTAAERAATFEGIRTG------------------------- 112
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ +L++ +PER+V +E+ + L + HT VDEAH
Sbjct: 113 TTRLVFTSPERLVN----TEIFRLLQSANT--------------HT-------IAVDEAH 147
Query: 380 CV 381
CV
Sbjct: 148 CV 149
>gi|148360486|ref|YP_001251693.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila str. Corby]
gi|148282259|gb|ABQ56347.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila str. Corby]
Length = 608
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q + + ++ +D VL+PTGGGKSLCYQ D
Sbjct: 22 FGFDSFRPPQEKIIEDVISGEDVLVLMPTGGGKSLCYQIPAIVRRGVGIVVSPLIALMED 81
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L+ GI A + NS T +A VL +L
Sbjct: 82 QVTALKLQ-GIRAAYYNSSLTAEEARNVLNQLHHN------------------------- 115
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
LLY+ PER++ + +C ++ F +DEAH
Sbjct: 116 ELDLLYIAPERLISTSFLDRLSEC-------------------------TISLFAIDEAH 150
Query: 380 CV 381
C+
Sbjct: 151 CI 152
>gi|288940303|ref|YP_003442543.1| ATP-dependent DNA helicase RecQ [Allochromatium vinosum DSM 180]
gi|288895675|gb|ADC61511.1| ATP-dependent DNA helicase RecQ [Allochromatium vinosum DSM 180]
Length = 620
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 71/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
IFG FR Q + + + D VL+PTGGGKSLCYQ
Sbjct: 12 IFGYDRFRGAQAEIIEHLIGGGDALVLMPTGGGKSLCYQIPALIRPGTAIVVSPLIALMQ 71
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A FLNS + +A AV + LR G
Sbjct: 72 DQVEALR-QLGVRAAFLNSSLDLDEARAVERALRNG------------------------ 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+ LLYV PER++ +CL SI ++A F +DEA
Sbjct: 107 -TLDLLYVAPERLLTE-------RCLSLLDSI------------------EIALFAIDEA 140
Query: 379 HCV 381
HCV
Sbjct: 141 HCV 143
>gi|307609659|emb|CBW99166.1| hypothetical protein LPW_09501 [Legionella pneumophila 130b]
Length = 608
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q + + ++ +D VL+PTGGGKSLCYQ D
Sbjct: 22 FGFDSFRPPQEKIIEDVISGEDVLVLMPTGGGKSLCYQIPAIVRRGVGIVVSPLIALMED 81
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L+ GI A + NS T +A VL +L
Sbjct: 82 QVTALKLQ-GIRAAYYNSSLTAEEARNVLNQLHHN------------------------- 115
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
LLY+ PER++ + +C ++ F +DEAH
Sbjct: 116 ELDLLYIAPERLISTSFLDRLSEC-------------------------TISLFAIDEAH 150
Query: 380 CV 381
C+
Sbjct: 151 CI 152
>gi|194335662|ref|YP_002017456.1| ATP-dependent DNA helicase RecQ [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308139|gb|ACF42839.1| ATP-dependent DNA helicase RecQ [Pelodictyon phaeoclathratiforme
BU-1]
Length = 599
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 69/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FRP Q + +A + K+D ++PTGGGKSLCYQ
Sbjct: 8 VFGFHEFRPNQERVVRAILDKRDVLAIMPTGGGKSLCYQLPAVMMEGTCMVISPLIALMK 67
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ GI A FLNS Q + VLQ L G
Sbjct: 68 DQVDGARAN-GIRAAFLNSSQNPDERDEVLQRLLSG------------------------ 102
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLY+ PER + + F E+L Q QL+ V+DEA
Sbjct: 103 -KLDLLYLAPERFILSH-FREIL------------------------GQVQLSMAVIDEA 136
Query: 379 HCV 381
HC+
Sbjct: 137 HCI 139
>gi|120436098|ref|YP_861784.1| ATP-dependent DNA helicase RecQ [Gramella forsetii KT0803]
gi|117578248|emb|CAL66717.1| ATP-dependent DNA helicase RecQ [Gramella forsetii KT0803]
Length = 702
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 54/132 (40%), Gaps = 47/132 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRPLQ + + QD V++PTGGGKS+CYQ D
Sbjct: 14 FGYENFRPLQKKIINSVFEGQDNLVIMPTGGGKSICYQLPAILLPEITLVISPLIALMKD 73
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN G+PA +LNS Q + A+ Q++ D
Sbjct: 74 QVDGLNAN-GVPAAYLNSSQEEADKQAIFQKI-------------------------DNK 107
Query: 320 SCKLLYVTPERI 331
KLLYV PE +
Sbjct: 108 EIKLLYVAPESL 119
>gi|416920299|ref|ZP_11932592.1| ATP-dependent DNA helicase RecQ, partial [Burkholderia sp. TJI49]
gi|325526981|gb|EGD04429.1| ATP-dependent DNA helicase RecQ [Burkholderia sp. TJI49]
Length = 375
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 68 VFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGHGAGIVVSPLI 127
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L+ + G+ A +LNS + ++AAA + LR+G +
Sbjct: 128 ALMQDQVAALS-EVGVRAAYLNSTLSGAEAAATERALREGEI------------------ 168
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ + F ++L+ + ++ F
Sbjct: 169 -------DLLYVAPERLMTGR-FLDLLE------------------------RAKIGLFA 196
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 197 IDEAHCV 203
>gi|425450984|ref|ZP_18830806.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 7941]
gi|389767941|emb|CCI06812.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 7941]
Length = 701
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 77/196 (39%), Gaps = 68/196 (34%)
Query: 207 LQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------- 257
+ A+D +E FG FRP Q Q +A++ QD V++PTGGGKSLC+
Sbjct: 1 MAAIDSLEKVLKYHFGYDQFRPNQRQIIEAALNDQDLLVIMPTGGGKSLCFQLPALIKKG 60
Query: 258 ------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQ 305
QDQ+ L GI ATFLNS Q R+ L+L
Sbjct: 61 VTVVVSPLIALMQDQVTAL-ADNGIGATFLNSTLNAKQVRD-----RESLIL-------- 106
Query: 306 LIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
+ KLLYV PER++ + SF + L +
Sbjct: 107 ------------QGKIKLLYVAPERLL-SPSFLDFLAVIDNYLG---------------- 137
Query: 366 CQRQLAGFVVDEAHCV 381
LA VDEAHCV
Sbjct: 138 ----LACLAVDEAHCV 149
>gi|294055968|ref|YP_003549626.1| RecQ family ATP-dependent DNA helicase [Coraliomargarita
akajimensis DSM 45221]
gi|293615301|gb|ADE55456.1| ATP-dependent DNA helicase, RecQ family [Coraliomargarita
akajimensis DSM 45221]
Length = 709
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q ++ +A +D V++PTGGGKSLCYQ D
Sbjct: 11 FGLTEFREPQRAIVESVLAGKDTLVVMPTGGGKSLCYQLPALLLPGVTLVVSPLIALMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L K G+PA LNS Q++ + A L+ +RQG
Sbjct: 71 QVDSLQAK-GLPAGLLNSSQSLDEQRASLEAIRQG------------------------- 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K++YV PER +QSF ++ L + + L +DEAH
Sbjct: 105 KLKMVYVAPERFR-SQSF--------------IRALPAEAISL----------LAIDEAH 139
Query: 380 CV 381
C+
Sbjct: 140 CL 141
>gi|254567515|ref|XP_002490868.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|238030664|emb|CAY68588.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|328351249|emb|CCA37649.1| bloom syndrome protein [Komagataella pastoris CBS 7435]
Length = 1302
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 76/186 (40%), Gaps = 71/186 (38%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY----------------------- 257
F +FR Q +A A+++ +D FVL+PTGGGKSLCY
Sbjct: 539 FKLESFRSNQLEAVNATLSGEDVFVLMPTGGGKSLCYQLPALVQSGSTRGTTVVVSPLIS 598
Query: 258 --QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
QDQ+ L + I A +NS+ TV QE RQ +F L +
Sbjct: 599 LMQDQVEHL-IANKIKAGMINSKGTV-------QERRQ-------------MFDLLNSGD 637
Query: 316 KDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVV 375
D L+Y++PE I + LK LHR G +LA VV
Sbjct: 638 LD-----LIYLSPEMISASNQARSSLKRLHRIG--------------------KLARIVV 672
Query: 376 DEAHCV 381
DEAHCV
Sbjct: 673 DEAHCV 678
>gi|296106447|ref|YP_003618147.1| Superfamily II DNA helicase [Legionella pneumophila 2300/99 Alcoy]
gi|295648348|gb|ADG24195.1| Superfamily II DNA helicase [Legionella pneumophila 2300/99 Alcoy]
Length = 608
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q + + ++ +D VL+PTGGGKSLCYQ D
Sbjct: 22 FGFDSFRPPQEKIIEDVISGEDVLVLMPTGGGKSLCYQIPAIVRPGVGIVVSPLIALMED 81
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L+ GI A + NS T +A VL +L
Sbjct: 82 QVTALKLQ-GIRAAYYNSSLTAEEARNVLNQLHHN------------------------- 115
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
LLY+ PER++ + +C ++ F +DEAH
Sbjct: 116 ELDLLYIAPERLISTSFLDRLSEC-------------------------TISLFAIDEAH 150
Query: 380 CV 381
C+
Sbjct: 151 CI 152
>gi|409404383|ref|ZP_11252862.1| ATP-dependent DNA helicase [Herbaspirillum sp. GW103]
gi|386435902|gb|EIJ48725.1| ATP-dependent DNA helicase [Herbaspirillum sp. GW103]
Length = 617
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 70/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG +FR Q + + D VL+PTGGGKSLCY Q
Sbjct: 24 VFGYSSFRGHQGEIVQHVAGGGDALVLMPTGGGKSLCYQVPALLRAGTGVVVSPLIALMQ 83
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A FLNS Q+ +A + + LRQG
Sbjct: 84 DQVDALA-EVGVRAAFLNSTQSFDEALQIERRLRQG------------------------ 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER++ +CL S R+ + F +DEA
Sbjct: 119 -DLDLLYVAPERLM-------TPRCLELLESARISL------------------FAIDEA 152
Query: 379 HCV 381
HCV
Sbjct: 153 HCV 155
>gi|428307721|ref|YP_007144546.1| ATP-dependent DNA helicase RecQ [Crinalium epipsammum PCC 9333]
gi|428249256|gb|AFZ15036.1| ATP-dependent DNA helicase RecQ [Crinalium epipsammum PCC 9333]
Length = 728
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 82/193 (42%), Gaps = 68/193 (35%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ----------- 258
L +E A FG FRP Q Q + ++ K+D +L+PTGGGKSLC+Q
Sbjct: 4 LASLEQALKHYFGYDNFRPGQRQIVEEALEKRDLLILMPTGGGKSLCFQLPALLKPGLTV 63
Query: 259 ----------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
DQ+ L L GI ATFLNS TV A +E+ G++
Sbjct: 64 VVSPLISLMQDQVEAL-LDNGIGATFLNS--TVDWADVRSREV--GIL------------ 106
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
K+LYV PER++ ++ F+ L+ + R+ I
Sbjct: 107 ---------NGKIKILYVAPERLLTDK-FTLFLEQVQRQVGI------------------ 138
Query: 369 QLAGFVVDEAHCV 381
+ F +DEAHCV
Sbjct: 139 --SAFAIDEAHCV 149
>gi|452209801|ref|YP_007489915.1| ATP-dependent DNA helicase RecQ [Methanosarcina mazei Tuc01]
gi|452099703|gb|AGF96643.1| ATP-dependent DNA helicase RecQ [Methanosarcina mazei Tuc01]
Length = 876
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG AFRPLQ + + + ++D FVL+PTGGGKS+CYQ D
Sbjct: 13 FGYTAFRPLQEEIIRDVLDRKDVFVLMPTGGGKSICYQLPSLLLDGVTVVVSPLISLMKD 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GI A +NS Q+ + V ++ FL +
Sbjct: 73 QVDGLEAN-GIAAACMNSTQSPRENRDV-----------KNAFLENRL------------ 108
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K+LY+ PER++ +F+ +KG + L F +DEAH
Sbjct: 109 --KVLYIAPERLMMPGTFA-----FLKKGKVSL--------------------FAIDEAH 141
Query: 380 CV 381
C+
Sbjct: 142 CI 143
>gi|331702262|ref|YP_004399221.1| ATP-dependent DNA helicase RecQ [Lactobacillus buchneri NRRL
B-30929]
gi|329129605|gb|AEB74158.1| ATP-dependent DNA helicase RecQ [Lactobacillus buchneri NRRL
B-30929]
Length = 592
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 72/182 (39%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q +A Q+ ++PTGGGKSLCYQ D
Sbjct: 11 FGYDSFRPGQQTVINDILAHQNVLTIMPTGGGKSLCYQIPAMLEDGLTLVVSPLIALMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN + GIPATF+NS + Q+ R G V
Sbjct: 71 QVDALN-ETGIPATFINSSLDFDEIDERFQQARDGEV----------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV+PER+ + +F+ RL L D+V VDEAH
Sbjct: 107 --KLLYVSPERL-DSGAFN------------RLANLPIDLV-------------AVDEAH 138
Query: 380 CV 381
C+
Sbjct: 139 CI 140
>gi|50307299|ref|XP_453628.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642762|emb|CAH00724.1| KLLA0D12694p [Kluyveromyces lactis]
Length = 1367
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 72/187 (38%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG +FRP Q +A A++ +D FVL+PTGGGKSLCY
Sbjct: 590 VFGLDSFRPNQLEAVNATLQGKDAFVLMPTGGGKSLCYQLPAIVKSGRTSGTTIVVSPLI 649
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L I A+ +S+ T Q GL+
Sbjct: 650 SLMQDQVEHL-LAKDIKASMFSSKGTAEQRRMTFNLFMNGLL------------------ 690
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
+L+Y++PE I + + + L+ G +LA V
Sbjct: 691 -------ELVYISPEMIKASVQCKKAISKLYEHG--------------------KLARIV 723
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 724 VDEAHCV 730
>gi|428781470|ref|YP_007173256.1| ATP-dependent DNA helicase RecQ [Dactylococcopsis salina PCC 8305]
gi|428695749|gb|AFZ51899.1| ATP-dependent DNA helicase RecQ [Dactylococcopsis salina PCC 8305]
Length = 713
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 74/182 (40%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG FRP Q +A +QD V++PTGGGKSLCY QD
Sbjct: 14 FGYDQFRPGQKDVIQAVCNQQDVLVVMPTGGGKSLCYQLPALLKPGLAVVVSPLIALMQD 73
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L K GI ATFLNS ++A + + QG
Sbjct: 74 QVESLQ-KNGIAATFLNSSLNPNEARSRRLSILQG------------------------- 107
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ KLLY+ PE++V + + + L+ + K + L F VDEAH
Sbjct: 108 NIKLLYLAPEKLVSSGA-KKFLQAVSEKQGLSL--------------------FAVDEAH 146
Query: 380 CV 381
C+
Sbjct: 147 CI 148
>gi|397663426|ref|YP_006504964.1| ATP-dependent DNA helicase [Legionella pneumophila subsp.
pneumophila]
gi|395126837|emb|CCD05020.1| ATP-dependent DNA helicase [Legionella pneumophila subsp.
pneumophila]
Length = 608
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q + + ++ +D VL+PTGGGKSLCYQ D
Sbjct: 22 FGFDSFRPPQEKIIEDVISGEDVLVLMPTGGGKSLCYQIPAIVRPGVGIVVSPLIALMED 81
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L+ GI A + NS T +A VL +L
Sbjct: 82 QVTALKLQ-GIRAAYYNSSLTAEEARNVLNQLHHN------------------------- 115
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
LLY+ PER++ + +C ++ F +DEAH
Sbjct: 116 ELDLLYIAPERLISTSFLDRLSEC-------------------------TISLFAIDEAH 150
Query: 380 CV 381
C+
Sbjct: 151 CI 152
>gi|187925622|ref|YP_001897264.1| ATP-dependent DNA helicase RecQ [Burkholderia phytofirmans PsJN]
gi|187716816|gb|ACD18040.1| ATP-dependent DNA helicase RecQ [Burkholderia phytofirmans PsJN]
Length = 615
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 71/187 (37%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPSLVRREGGFGTGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++A A + LR G
Sbjct: 71 ALMQDQVAALT-EVGVRAAYLNSTLSSAEAMATERALRDG-------------------- 109
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F E+L+ + ++ F
Sbjct: 110 -----DIDLLYVAPERLM-TPRFQELLE------------------------RTRIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|52841103|ref|YP_094902.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54296889|ref|YP_123258.1| hypothetical protein lpp0930 [Legionella pneumophila str. Paris]
gi|397666546|ref|YP_006508083.1| ATP-dependent DNA helicase [Legionella pneumophila subsp.
pneumophila]
gi|52628214|gb|AAU26955.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750674|emb|CAH12081.1| hypothetical protein lpp0930 [Legionella pneumophila str. Paris]
gi|395129957|emb|CCD08190.1| ATP-dependent DNA helicase [Legionella pneumophila subsp.
pneumophila]
Length = 608
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q + + ++ +D VL+PTGGGKSLCYQ D
Sbjct: 22 FGFDSFRPPQEKIIEDVISGEDVLVLMPTGGGKSLCYQIPAIVRPGVGIVVSPLIALMED 81
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L+ GI A + NS T +A VL +L
Sbjct: 82 QVTALKLQ-GIRAAYYNSSLTAEEARNVLNQLHHN------------------------- 115
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
LLY+ PER++ + +C ++ F +DEAH
Sbjct: 116 ELDLLYIAPERLISTSFLDRLSEC-------------------------TISLFAIDEAH 150
Query: 380 CV 381
C+
Sbjct: 151 CI 152
>gi|392556563|ref|ZP_10303700.1| ATP-dependent DNA helicase [Pseudoalteromonas undina NCIMB 2128]
Length = 607
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 68/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q A++ QD VLLPTGGGKS+CY Q
Sbjct: 22 VFGYSEFRDGQSAVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+ A ++N+ + V Q+L QGL+
Sbjct: 82 DQVTQLQ-ALGVKAAYINNSLAREEQQLVYQQLHQGLI---------------------- 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PE K L R+ RL L + F +DEA
Sbjct: 119 ---KLLYVAPE------------KVLQREFLERLSHLNVSL-------------FAIDEA 150
Query: 379 HCV 381
HCV
Sbjct: 151 HCV 153
>gi|303316590|ref|XP_003068297.1| ATP-dependent DNA helicase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107978|gb|EER26152.1| ATP-dependent DNA helicase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320038080|gb|EFW20016.1| RecQ family helicase RecQ [Coccidioides posadasii str. Silveira]
Length = 584
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 77/191 (40%), Gaps = 66/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++F +FG +FRPLQ + +A + D F+ T GKSLCYQ
Sbjct: 7 DIDFTLRRVFGKNSFRPLQREVIQAVIEGHDVFLQAATSFGKSLCYQLPAVVCHGITIVV 66
Query: 259 --------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
DQ+ L GIP +NS + S+ A++ + +LS H
Sbjct: 67 SPLLSLMVDQVSALEAN-GIPVATINSTTSHSKRKAIIAD-----ILSGH---------- 110
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE ++F + +K +H +G +L
Sbjct: 111 --------PHIRLLYVTPE-YCQTEAFRKHVKQVHSQG--------------------EL 141
Query: 371 AGFVVDEAHCV 381
+DEAHCV
Sbjct: 142 NRIAIDEAHCV 152
>gi|448097267|ref|XP_004198627.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
gi|359380049|emb|CCE82290.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
Length = 1415
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 71/183 (38%)
Query: 224 RAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------------------Q 258
++FRP Q +A +++ +D FVL+PTGGGKSLCY Q
Sbjct: 739 KSFRPNQLEAIVSTLNGRDVFVLMPTGGGKSLCYQLPALISSGKTRGTTIVISPLISLMQ 798
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L L I A ++S+ + ++ + L++ R G
Sbjct: 799 DQVQHL-LHKNIRAGMISSKGSAAERKSTLEQFRNG------------------------ 833
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+L+Y++PE + +Q ++ L+ RQLA VVDEA
Sbjct: 834 -ELQLVYLSPEMVNTSQHIQRIIARLYES--------------------RQLARVVVDEA 872
Query: 379 HCV 381
HCV
Sbjct: 873 HCV 875
>gi|424664440|ref|ZP_18101476.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
gi|404576022|gb|EKA80763.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
Length = 601
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 76/184 (41%), Gaps = 73/184 (39%)
Query: 219 VIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-------------------- 258
+ FG +FRPLQ + + ++K+D VL+PTGGGKS+CYQ
Sbjct: 7 IYFGYDSFRPLQEEIIRNLMSKRDALVLMPTGGGKSICYQLPALLMEGTAIVISPLISLM 66
Query: 259 -DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD 317
DQ+ +L GIPA LNS S+ A LR+ C S K
Sbjct: 67 KDQVESLCAN-GIPAGALNSSNDESENA----NLRRA-----------------CISGK- 103
Query: 318 KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDE 377
KLLY++PE+++ + L R +I L F VDE
Sbjct: 104 ---LKLLYISPEKLLSEADY------LLRDMTISL--------------------FAVDE 134
Query: 378 AHCV 381
AHC+
Sbjct: 135 AHCI 138
>gi|425433706|ref|ZP_18814184.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9432]
gi|389675683|emb|CCH95185.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9432]
Length = 701
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 77/196 (39%), Gaps = 68/196 (34%)
Query: 207 LQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------- 257
+ A+D +E FG FRP Q Q +A++ QD V++PTGGGKSLC+
Sbjct: 1 MAAIDSLEKVLKYHFGYDQFRPNQRQIIEAALNDQDLLVIMPTGGGKSLCFQLPALIKKG 60
Query: 258 ------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQ 305
QDQ+ L GI ATFLNS Q R+ L+L
Sbjct: 61 VTVVVSPLIALMQDQVTAL-ADNGIGATFLNSTLNAKQVRD-----RESLIL-------- 106
Query: 306 LIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
+ KLLYV PER++ + SF + L +
Sbjct: 107 ------------QGKIKLLYVAPERLL-SPSFLDFLAVIDNYLG---------------- 137
Query: 366 CQRQLAGFVVDEAHCV 381
LA VDEAHCV
Sbjct: 138 ----LACLAVDEAHCV 149
>gi|427733629|ref|YP_007053173.1| ATP-dependent DNA helicase RecQ [Rivularia sp. PCC 7116]
gi|427368670|gb|AFY52626.1| ATP-dependent DNA helicase RecQ [Rivularia sp. PCC 7116]
Length = 719
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG +FR Q + ++ +D V++PTGGGKSLC+ QD
Sbjct: 15 FGYDSFRSPQREIIVEALENRDLLVIMPTGGGKSLCFQLPALMKEGLTVVVSPLIALMQD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L K GIPATFLNS +VS ++E Q ++ +
Sbjct: 75 QVDGLR-KNGIPATFLNS--SVSPHKVRMRE--QAILAGK-------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ ++ F +L +H + I + F +DEAH
Sbjct: 110 -VKLLYVAPERLL-SERFLPLLDLVHHQIGI--------------------SAFAIDEAH 147
Query: 380 CV 381
CV
Sbjct: 148 CV 149
>gi|390436587|ref|ZP_10225125.1| ATP-dependent DNA helicase RecQ [Pantoea agglomerans IG1]
Length = 609
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q +++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQHFRPGQQTIINEALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A +LNS T Q V+ + R G V
Sbjct: 81 QVDQL-LANGVAAAYLNSTMTREQQQTVMADCRTGRV----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER++ + + Q A VDEAH
Sbjct: 117 --KLLYIAPERLMMDNFLDSL-------------------------AHWQPAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|317046403|ref|YP_004114051.1| ATP-dependent DNA helicase RecQ [Pantoea sp. At-9b]
gi|316948020|gb|ADU67495.1| ATP-dependent DNA helicase RecQ [Pantoea sp. At-9b]
Length = 607
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + ++A +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQTIIETALAGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS QT + V + R G
Sbjct: 81 QVDQL-LANGVAAACLNSTQTREEQQQVFADCRSG------------------------- 114
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER++ L LH + L VDEAH
Sbjct: 115 RLKLLYIAPERLM----MDNFLDSLHHWNPVML---------------------AVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|54310561|ref|YP_131581.1| ATP-dependent DNA helicase RecQ [Photobacterium profundum SS9]
gi|46915004|emb|CAG21779.1| putative ATP-dependent DNA helicase RecQ [Photobacterium profundum
SS9]
Length = 615
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 72/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG ++FR Q + +A V QDC V++PTGGGKSLCYQ
Sbjct: 24 VFGYQSFRIGQQEVIEAVVEGQDCLVIMPTGGGKSLCYQIPALIMPGITLVISPLISLMK 83
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ LN G+ A ++NS + + +R+G
Sbjct: 84 DQVDQLNAN-GVAAAYINSTMSREEVMETFLAMREG------------------------ 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YV+PER++ + F E L + L+ VDEA
Sbjct: 119 -DLKLVYVSPERVL-MRDFIERL------------------------YETPLSMVAVDEA 152
Query: 379 HCV 381
HCV
Sbjct: 153 HCV 155
>gi|402086461|gb|EJT81359.1| RecQ helicase MUSN [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1754
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIP---ATFLN 276
F FR Q +A A+++ +D FVL+PTGGGKSLCYQ +I G+ + L+
Sbjct: 842 FRMSGFRHNQLEAINATLSGKDAFVLMPTGGGKSLCYQLPAVIDTGNTRGVTIVVSPLLS 901
Query: 277 SQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQS 336
Q VL L + +I +S+ + +LLYVTPE I +Q+
Sbjct: 902 LMQDQIDHLKVLHILARQFSGDVDKAQRDMILDALRSSKNPENMVRLLYVTPEMIGKSQA 961
Query: 337 FSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F L KV + D +LA V+DEAHCV
Sbjct: 962 FLNALD----------KVYSND----------KLARIVIDEAHCV 986
>gi|359446850|ref|ZP_09236489.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20439]
gi|358039322|dbj|GAA72738.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20439]
Length = 607
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 68/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q A++ QD VLLPTGGGKS+CY Q
Sbjct: 22 VFGYSEFRDGQSAVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+ A ++N+ + V Q+L QGL+
Sbjct: 82 DQVTQLQ-ALGVKAAYINNSLAREEQQLVYQQLHQGLI---------------------- 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PE K L R+ RL L + F +DEA
Sbjct: 119 ---KLLYVAPE------------KVLQREFLERLSHLNVSL-------------FAIDEA 150
Query: 379 HCV 381
HCV
Sbjct: 151 HCV 153
>gi|85060315|ref|YP_456017.1| ATP-dependent DNA helicase RecQ [Sodalis glossinidius str.
'morsitans']
gi|84780835|dbj|BAE75612.1| ATP-dependent DNA helicase RecQ [Sodalis glossinidius str.
'morsitans']
Length = 625
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A ++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQAIIHAVLSGRDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS Q+ Q V+ R G +
Sbjct: 81 QVDQL-LANGVAAACLNSTQSREQQYEVMAACRAGRI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K+LY+ PER++ + +L Q +LA VDEAH
Sbjct: 117 --KMLYIAPERLMMDN-------------------------MLEQLQQWRLAMIAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|392587356|gb|EIW76690.1| ATP-dependent DNA helicase [Coniophora puteana RWD-64-598 SS2]
Length = 898
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 31/164 (18%)
Query: 225 AFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKF-GI-----PATFLNSQ 278
+FR Q +A A++ +D FVL+PTGGGKSLCYQ I K G+ P L +
Sbjct: 173 SFRTNQLEAITATLDGRDVFVLMPTGGGKSLCYQLPAICKTGKTQGVTIVITPLLALMTD 232
Query: 279 QTVSQAAAVLQELRQGLVLSQHYFLHQLIF-VLTCASRKDKPSCKLLYVTPERIVGNQSF 337
Q ++ A + + LS F + V + RK P L+YVTPER+ + S
Sbjct: 233 QVMALKAKNI----DAVSLSSGAFCGETTRDVESRLRRKGAPKPSLVYVTPERMQNSNSL 288
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+L L+ +QLA FVVDEAH +
Sbjct: 289 LSLLDELND--------------------SKQLARFVVDEAHVI 312
>gi|344942347|ref|ZP_08781635.1| ATP-dependent DNA helicase RecQ [Methylobacter tundripaludum SV96]
gi|344263539|gb|EGW23810.1| ATP-dependent DNA helicase RecQ [Methylobacter tundripaludum SV96]
Length = 712
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 72/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q + +A QD VL+PTGGGKSLCY Q
Sbjct: 12 VFGYDKFRGQQQDVIEQLIAGQDALVLMPTGGGKSLCYQIPALIRPGVGIVISPLIALMQ 71
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L L+ G+ A FLNS ++ ++ + Q+L G
Sbjct: 72 DQVSAL-LQLGVKAAFLNSTLSLEESRRIEQQLLNG------------------------ 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLY+ PER+ R G++ ++ ++A F +DEA
Sbjct: 107 -ELDLLYIAPERLTSA-----------RTGALFERI--------------KIALFAIDEA 140
Query: 379 HCV 381
HCV
Sbjct: 141 HCV 143
>gi|269863321|ref|XP_002651179.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
gi|220064997|gb|EED42877.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
Length = 409
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 65/156 (41%), Gaps = 46/156 (29%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------- 257
D+ F IF FR Q + +AS+ D FVL+PTGGGKSLCY
Sbjct: 263 DEKYFYLKTIFRLDEFRSNQKKIIEASLRGDDVFVLMPTGGGKSLCYQLPALINVGLTIV 322
Query: 258 --------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
QDQI +L L IPA LNS TV + + + +R
Sbjct: 323 ISPLLSLIQDQISSL-LNKNIPAAALNSNCTVGERDLIYKCIR----------------- 364
Query: 310 LTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLH 345
D +LLYVTPE + + F +LK L+
Sbjct: 365 -------DTNLIRLLYVTPELLNNSDRFKGILKSLY 393
>gi|126668479|ref|ZP_01739435.1| ATP-dependent DNA helicase RecQ [Marinobacter sp. ELB17]
gi|126627096|gb|EAZ97737.1| ATP-dependent DNA helicase RecQ, partial [Marinobacter sp. ELB17]
Length = 367
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 67/183 (36%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG +FRPLQ K A D VL+PTGGGKSLCY Q
Sbjct: 28 VFGYDSFRPLQEDIVKELCAGGDALVLMPTGGGKSLCYQVPALVRPGTGIVVSPLIALMQ 87
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A FLNS QA A L G
Sbjct: 88 DQVNALK-ELGVRAAFLNSTMDFEQARATEYALMSG------------------------ 122
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLY PER++ ++ ++ LH +A F +DEA
Sbjct: 123 -ELDLLYCAPERLIQPRT----IELLHNTS---------------------IALFAIDEA 156
Query: 379 HCV 381
HCV
Sbjct: 157 HCV 159
>gi|444313787|ref|XP_004177551.1| hypothetical protein TBLA_0A02320 [Tetrapisispora blattae CBS 6284]
gi|387510590|emb|CCH58032.1| hypothetical protein TBLA_0A02320 [Tetrapisispora blattae CBS 6284]
Length = 1416
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 71/182 (39%), Gaps = 71/182 (39%)
Query: 225 AFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------------------------QD 259
FRP Q +A A+++ +D FVL+PTGGGKSLCY QD
Sbjct: 733 GFRPHQLEAINATLSGRDVFVLMPTGGGKSLCYQLPAVIKSGKTRGTTVVISPLISLMQD 792
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L I A +S+ T Q RQ L H FL
Sbjct: 793 QVEHL-LDNNIKACMFSSKGTADQR-------RQHFNLFIHGFL---------------- 828
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
L+Y++PE I ++ LK L+ G +LA V+DEAH
Sbjct: 829 --DLIYMSPEMISASEQCKRALKKLYDDG--------------------KLARVVIDEAH 866
Query: 380 CV 381
CV
Sbjct: 867 CV 868
>gi|157368442|ref|YP_001476431.1| ATP-dependent DNA helicase RecQ [Serratia proteamaculans 568]
gi|157320206|gb|ABV39303.1| ATP-dependent DNA helicase RecQ [Serratia proteamaculans 568]
Length = 614
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 55/133 (41%), Gaps = 47/133 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q ++ QDC V++PTGGGKSLCYQ D
Sbjct: 25 FGYQQFRPGQQTIINTAIGGQDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 84
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A NS QT Q V+ R G +
Sbjct: 85 QVDQL-LAYGVAAACYNSTQTREQQLEVMAGCRSGQI----------------------- 120
Query: 320 SCKLLYVTPERIV 332
K+LY+ PER++
Sbjct: 121 --KMLYIAPERLM 131
>gi|423270795|ref|ZP_17249766.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|423274619|ref|ZP_17253565.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
gi|392698719|gb|EIY91901.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|392704877|gb|EIY98011.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
Length = 601
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + ++K+D VL+PTGGGKS+CYQ D
Sbjct: 9 FGYDSFRPLQEEIIHNLISKKDSLVLMPTGGGKSICYQLPALLMEGTAIVISPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL GIPA LNS ++ A LR+ + Q
Sbjct: 69 QVETLRAN-GIPAGALNSSNDETENA----NLRRACISGQ-------------------- 103
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + L D+ L+ F VDEAH
Sbjct: 104 -LKLLYISPEKLLSEADY-----------------LLRDMT---------LSLFAVDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|265765824|ref|ZP_06093865.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
gi|263253492|gb|EEZ24957.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
Length = 607
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + ++K+D VL+PTGGGKS+CYQ D
Sbjct: 15 FGYDSFRPLQEEIIHNLISKKDSLVLMPTGGGKSICYQLPALLMEGTAIVISPLISLMKD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL GIPA LNS ++ A LR+ + Q
Sbjct: 75 QVETLRAN-GIPAGALNSSNDETENA----NLRRACISGQ-------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + L D+ L+ F VDEAH
Sbjct: 110 -LKLLYISPEKLLSEADY-----------------LLRDMT---------LSLFAVDEAH 142
Query: 380 CV 381
C+
Sbjct: 143 CI 144
>gi|375359515|ref|YP_005112287.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
gi|301164196|emb|CBW23754.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
Length = 607
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + ++K+D VL+PTGGGKS+CYQ D
Sbjct: 15 FGYDSFRPLQEEIIHNLISKKDSLVLMPTGGGKSICYQLPALLMEGTAIVISPLISLMKD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL GIPA LNS ++ A LR+ + Q
Sbjct: 75 QVETLRAN-GIPAGALNSSNDETENA----NLRRACISGQ-------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + L D+ L+ F VDEAH
Sbjct: 110 -LKLLYISPEKLLSEADY-----------------LLRDMT---------LSLFAVDEAH 142
Query: 380 CV 381
C+
Sbjct: 143 CI 144
>gi|83767361|dbj|BAE57500.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 809
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 27/166 (16%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIP---ATFLN 276
F R FR Q +A A+++ +D FVL+PTGGGKSLCYQ I+ G+ + L+
Sbjct: 252 FHLRGFRLNQLEAIDATLSGKDTFVLMPTGGGKSLCYQLPSIVKSGTTRGVTIVISPLLS 311
Query: 277 SQQTVSQAAAVLQ-ELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQ 335
Q Q + Q E++ L+ + + + T +S + +LLY+TPE + NQ
Sbjct: 312 LMQ--DQVYHLRQLEIKAYLLNGETQKTERQWIMSTLSSSDAEGHIELLYITPEMVNKNQ 369
Query: 336 SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ L+ L+ + +LA V+DEAHCV
Sbjct: 370 TLIRNLERLNNR--------------------HRLARIVIDEAHCV 395
>gi|218245896|ref|YP_002371267.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8801]
gi|218166374|gb|ACK65111.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8801]
Length = 709
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 73/182 (40%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG +FRP Q + + ++ +D V++PTGGGKSLC+ QD
Sbjct: 15 FGYDSFRPGQAKIIQEALQNRDLLVIMPTGGGKSLCFQLPALLKPGLTVVVSPLIALMQD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL L GI ATFLNS + + Q + +G +
Sbjct: 75 QVDTL-LDNGIGATFLNSSLKSEEVRSREQAIIKGKI----------------------- 110
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ N F+ L L K + F +DEAH
Sbjct: 111 --KLLYVAPERLL-NDKFTPFLDFLAEKIGVSF--------------------FAIDEAH 147
Query: 380 CV 381
CV
Sbjct: 148 CV 149
>gi|124002830|ref|ZP_01687682.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
gi|123992058|gb|EAY31445.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
Length = 712
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 72/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG + FRPLQ +A D VL+PTGGGKSLCY QD
Sbjct: 14 FGYKQFRPLQKDIIDQVLAGNDALVLMPTGGGKSLCYQVPALMMEGIAIVVSPLIALMQD 73
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + I A F NS QT S+ + + ++ G +
Sbjct: 74 QVEALQ-RNDIAAAFYNSTQTSSEQSEIERQCMDGKI----------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV+PE+++ +F E L+ L Q+ F +DEAH
Sbjct: 110 --KLLYVSPEKLLSG-TFIEFLQRL------------------------QINLFAIDEAH 142
Query: 380 CV 381
C+
Sbjct: 143 CI 144
>gi|443309958|ref|ZP_21039633.1| ATP-dependent DNA helicase RecQ [Synechocystis sp. PCC 7509]
gi|442780011|gb|ELR90229.1| ATP-dependent DNA helicase RecQ [Synechocystis sp. PCC 7509]
Length = 724
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 73/182 (40%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG +FR Q Q + ++ QD V++PTGGGKSLC+ QD
Sbjct: 15 FGYTSFRLGQQQIIEQALNNQDLLVVMPTGGGKSLCFQLPALLRKGLTVVVSPLIALMQD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L GI ATFLNS T Q + R+ +LS
Sbjct: 75 QVQSLR-NNGIGATFLNSTLTTYQVRS-----REEAILSG-------------------- 108
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ ++ + H+ G +A F +DEAH
Sbjct: 109 KVKLLYVAPERLLSDRFLPFIDLVQHQIG---------------------IASFAIDEAH 147
Query: 380 CV 381
CV
Sbjct: 148 CV 149
>gi|423261207|ref|ZP_17242109.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|423267342|ref|ZP_17246324.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
gi|387774449|gb|EIK36560.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|392698045|gb|EIY91228.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
Length = 601
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + ++K+D VL+PTGGGKS+CYQ D
Sbjct: 9 FGYDSFRPLQEEIIHNLISKKDSLVLMPTGGGKSICYQLPALLMEGTAIVISPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL GIPA LNS ++ A LR+ + Q
Sbjct: 69 QVETLRAN-GIPAGALNSSNDETENA----NLRRACISGQ-------------------- 103
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + L D+ L+ F VDEAH
Sbjct: 104 -LKLLYISPEKLLSEADY-----------------LLRDMT---------LSLFAVDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|89899271|ref|YP_521742.1| ATP-dependent DNA helicase RecQ [Rhodoferax ferrireducens T118]
gi|89344008|gb|ABD68211.1| ATP-dependent DNA helicase RecQ [Rhodoferax ferrireducens T118]
Length = 618
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 69/187 (36%), Gaps = 72/187 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG AFR Q + VA D VL+PTGGGKSLCYQ
Sbjct: 12 VFGYDAFRGPQQAIIEHVVAGGDALVLMPTGGGKSLCYQIPAIAREQAGQGITVVISPLI 71
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L+ + GI A FLNS + QA V + L +G
Sbjct: 72 ALMHDQVGALH-EAGIKAEFLNSTLSGEQATQVERRLLRG-------------------- 110
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLY PER+ F L L+ +G + L F
Sbjct: 111 -----DITLLYAAPERVT-TPRFLAQLDSLYERGKLSL--------------------FA 144
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 145 IDEAHCV 151
>gi|53714712|ref|YP_100704.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
gi|52217577|dbj|BAD50170.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
Length = 607
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + ++K+D VL+PTGGGKS+CYQ D
Sbjct: 15 FGYDSFRPLQEEIIHNLISKKDSLVLMPTGGGKSICYQLPALLMEGTAIVISPLISLMKD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL GIPA LNS ++ A LR+ + Q
Sbjct: 75 QVETLRAN-GIPAGALNSSNDETENA----NLRRACISGQ-------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + L D+ L+ F VDEAH
Sbjct: 110 -LKLLYISPEKLLSEADY-----------------LLRDMT---------LSLFAVDEAH 142
Query: 380 CV 381
C+
Sbjct: 143 CI 144
>gi|336411370|ref|ZP_08591837.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|423251179|ref|ZP_17232194.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|423254505|ref|ZP_17235435.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
gi|335942081|gb|EGN03930.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|392652136|gb|EIY45798.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|392653827|gb|EIY47478.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
Length = 601
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + ++K+D VL+PTGGGKS+CYQ D
Sbjct: 9 FGYDSFRPLQEEIIHNLISKKDSLVLMPTGGGKSICYQLPALLMEGTAIVISPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL GIPA LNS ++ A LR+ + Q
Sbjct: 69 QVETLRAN-GIPAGALNSSNDETENA----NLRRACISGQ-------------------- 103
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + L D+ L+ F VDEAH
Sbjct: 104 -LKLLYISPEKLLSEADY-----------------LLRDMT---------LSLFAVDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|227512649|ref|ZP_03942698.1| ATP-dependent DNA helicase RecQ [Lactobacillus buchneri ATCC 11577]
gi|227084114|gb|EEI19426.1| ATP-dependent DNA helicase RecQ [Lactobacillus buchneri ATCC 11577]
Length = 587
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 75/182 (41%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q +A ++ ++PTGGGKS+CYQ D
Sbjct: 11 FGYDSFRPGQQAVIDDILAHKNVLTIMPTGGGKSMCYQIPALLLKGVTLVVSPLIALMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN + GIPATF+NS + + +++R+G V
Sbjct: 71 QVDALN-ETGIPATFVNSTLSFEEIDERFEQVREGAV----------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV+PER+ + +FS+ L L D+V VDEAH
Sbjct: 107 --KLLYVSPERL-DSGAFSQ------------LANLPIDLV-------------AVDEAH 138
Query: 380 CV 381
C+
Sbjct: 139 CI 140
>gi|226945339|ref|YP_002800412.1| ATP-dependent DNA helicase RecQ [Azotobacter vinelandii DJ]
gi|226720266|gb|ACO79437.1| ATP-dependent DNA helicase RecQ [Azotobacter vinelandii DJ]
Length = 707
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 72/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG AFR Q + D VL+PTGGGKSLCYQ
Sbjct: 12 VFGYDAFRGNQAAIIERVARGGDALVLMPTGGGKSLCYQVPALLREGLAVVVSPLIALME 71
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ TL+ + G+PA LNS ++ + + + +RQG
Sbjct: 72 DQVATLD-ELGVPAVALNSTLSLDEQREIAERIRQG------------------------ 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLY+ PER+V + +L L R LP + F +DEA
Sbjct: 107 -GIKLLYLAPERLVQPR----MLAFLQR---------------LP------IGLFAIDEA 140
Query: 379 HCV 381
HCV
Sbjct: 141 HCV 143
>gi|60682718|ref|YP_212862.1| ATP-dependent DNA helicase [Bacteroides fragilis NCTC 9343]
gi|60494152|emb|CAH08944.1| putative ATP-dependent DNA helicase [Bacteroides fragilis NCTC
9343]
Length = 607
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + ++K+D VL+PTGGGKS+CYQ D
Sbjct: 15 FGYDSFRPLQEEIIHNLISKKDSLVLMPTGGGKSICYQLPALLMEGTAIVISPLISLMKD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL GIPA LNS ++ A LR+ + Q
Sbjct: 75 QVETLRAN-GIPAGALNSSNDETENA----NLRRACISGQ-------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + L D+ L+ F VDEAH
Sbjct: 110 -LKLLYISPEKLLSEADY-----------------LLRDMT---------LSLFAVDEAH 142
Query: 380 CV 381
C+
Sbjct: 143 CI 144
>gi|380696494|ref|ZP_09861353.1| ATP-dependent DNA helicase RecQ [Bacteroides faecis MAJ27]
Length = 601
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 73/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + + + KQD VL+PTGGGKS+CYQ D
Sbjct: 9 FGYDSFRPLQEEIIRHVLNKQDALVLMPTGGGKSICYQLPALLSEGTTVVVSPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL GI A LNS ++ A LR+ V +
Sbjct: 69 QVETLQAN-GIAAGALNSSNDETENA----NLRRACV---------------------EG 102
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + + L R SI L F +DEAH
Sbjct: 103 RLKLLYISPEKLIAEKDY------LLRDMSISL--------------------FAIDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|410075411|ref|XP_003955288.1| hypothetical protein KAFR_0A07190 [Kazachstania africana CBS 2517]
gi|372461870|emb|CCF56153.1| hypothetical protein KAFR_0A07190 [Kazachstania africana CBS 2517]
Length = 1318
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 75/187 (40%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F FRP Q +A A++ +D FVL+PTGGGKSLCYQ
Sbjct: 548 VFKLPGFRPNQEEAVNATLDGKDVFVLMPTGGGKSLCYQLPAIVKSGRTRGTTIVISPLI 607
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L L I A+ +S+ T +E RQ L F+H L+ V+
Sbjct: 608 SLMQDQVEHL-LAKNIKASMFSSKGTS-------EERRQTFNL----FIHGLLDVV---- 651
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
Y++PE I +Q + L+ G+ LA V
Sbjct: 652 ----------YISPEMISASQQCKRAIDKLYTDGN--------------------LARVV 681
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 682 VDEAHCV 688
>gi|323527608|ref|YP_004229761.1| ATP-dependent DNA helicase RecQ [Burkholderia sp. CCGE1001]
gi|323384610|gb|ADX56701.1| ATP-dependent DNA helicase RecQ [Burkholderia sp. CCGE1001]
Length = 615
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 71/187 (37%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPSLVRRERGFGTGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++A A + LR G
Sbjct: 71 ALMQDQVAALT-EVGVRAAYLNSTLSSAEAMATERALRDG-------------------- 109
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F E+L+ + ++ F
Sbjct: 110 -----DIDLLYVAPERLM-TPRFQELLE------------------------RTRIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|90414260|ref|ZP_01222240.1| putative ATP-dependent DNA helicase RecQ [Photobacterium profundum
3TCK]
gi|90324707|gb|EAS41248.1| putative ATP-dependent DNA helicase RecQ [Photobacterium profundum
3TCK]
Length = 615
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 72/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG ++FR Q + +A + QDC V++PTGGGKSLCYQ
Sbjct: 24 VFGYQSFRIGQQEVIEAVIEGQDCLVIMPTGGGKSLCYQIPALIMPGITLVISPLISLMK 83
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ LN G+ A ++NS + + +R+G
Sbjct: 84 DQVDQLNAN-GVAAAYINSTMSREEVMETFLAMREG------------------------ 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YV+PER++ + F E L + L+ VDEA
Sbjct: 119 -DLKLVYVSPERVL-MRDFIERL------------------------YETPLSMVAVDEA 152
Query: 379 HCV 381
HCV
Sbjct: 153 HCV 155
>gi|423283377|ref|ZP_17262261.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
gi|404581095|gb|EKA85801.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
Length = 601
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + ++K+D VL+PTGGGKS+CYQ D
Sbjct: 9 FGYDSFRPLQEEIIHNLISKKDSLVLMPTGGGKSICYQLPALLMEGTAIVISPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL GIPA LNS ++ A LR+ + Q
Sbjct: 69 QVETLRAN-GIPAGALNSSNDETENA----NLRRACISGQ-------------------- 103
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + L D+ L+ F VDEAH
Sbjct: 104 -LKLLYISPEKLLSEADY-----------------LLRDMT---------LSLFAVDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|407714991|ref|YP_006835556.1| ATP-dependent DNA helicase RecQ [Burkholderia phenoliruptrix
BR3459a]
gi|407237175|gb|AFT87374.1| ATP-dependent DNA helicase RecQ [Burkholderia phenoliruptrix
BR3459a]
Length = 615
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 73/187 (39%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVASGGDCLVLMPTGGGKSLCYQIPSLVRRERGFGTGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++A A + LR G +
Sbjct: 71 ALMQDQVAALT-EVGVRAAYLNSTLSSAEAMATERALRDGDI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F E+L+ + ++ F
Sbjct: 112 -------DLLYVAPERLM-TPRFQELLE------------------------RTRIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|383119448|ref|ZP_09940187.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
gi|382973213|gb|EES87060.2| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
Length = 601
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + ++K+D VL+PTGGGKS+CYQ D
Sbjct: 9 FGYDSFRPLQEEIIHNLISKKDSLVLMPTGGGKSICYQLPALLMEGTAIVISPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL GIPA LNS ++ A LR+ + Q
Sbjct: 69 QVETLRAN-GIPAGALNSSNDETENA----NLRRACISGQ-------------------- 103
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + L D+ L+ F VDEAH
Sbjct: 104 -LKLLYISPEKLLSEADY-----------------LLRDMT---------LSLFAVDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|257876826|ref|ZP_05656479.1| ATP-dependent DNA helicase RecQ [Enterococcus casseliflavus EC20]
gi|257810992|gb|EEV39812.1| ATP-dependent DNA helicase RecQ [Enterococcus casseliflavus EC20]
Length = 588
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q ++ + +Q+ ++PTGGGKS+CYQ D
Sbjct: 12 FGYSQFREGQETIIQSILTQQNVLGIMPTGGGKSICYQLPALLLDGVTLVISPLISLMKD 71
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L + GIPA ++NS T +Q LQE RQG +
Sbjct: 72 QVDSL-VDMGIPAAYINSSLTGAQINQRLQEARQGRI----------------------- 107
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV+PER+ +++F L+ Q +A VDEAH
Sbjct: 108 --KLLYVSPERL-DSEAFRYSLR------------------------QMPIALLAVDEAH 140
Query: 380 CV 381
C+
Sbjct: 141 CI 142
>gi|123494203|ref|XP_001326459.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
gi|121909374|gb|EAY14236.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
Length = 1081
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 73/174 (41%), Gaps = 35/174 (20%)
Query: 213 MEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGI-- 270
M N +F + FR Q A A++ +D FVL+PTGGGKSLCYQ + ++ GI
Sbjct: 368 MNIVNQKVFHHMHFRGKQRDAIGAALNGKDVFVLMPTGGGKSLCYQ---LPGYMQGGITL 424
Query: 271 ---PATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVT 327
P L Q S ++ + G S+ + + S + L++T
Sbjct: 425 VVSPLISLIQDQVRSLVELNIEAMSFGADTSKEKYSEMW-------RKISNNSLRFLFLT 477
Query: 328 PERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
PE+I+ + L L+ + +L FV+DEAHCV
Sbjct: 478 PEKIMAGSTLDGFLTQLYN--------------------ENRLTRFVIDEAHCV 511
>gi|160943678|ref|ZP_02090910.1| hypothetical protein FAEPRAM212_01173 [Faecalibacterium prausnitzii
M21/2]
gi|158445133|gb|EDP22136.1| putative ATP-dependent DNA helicase RecQ [Faecalibacterium
prausnitzii M21/2]
Length = 525
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 73/185 (39%), Gaps = 76/185 (41%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG +FRP Q + +A QD ++PTG GKS+CYQ
Sbjct: 11 VFGYDSFRPGQEEIVSRLLAGQDVLAVMPTGAGKSICYQVPALLLPGITIVVSPLVSLMK 70
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L ++ G+ A FLN+ T +Q A +L R+G
Sbjct: 71 DQVGAL-VQAGVAAAFLNNSLTDNQKALMLHRAREGWY---------------------- 107
Query: 319 PSCKLLYVTPERI--VGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
K++YV PER+ G Q F++ +RQ++ VD
Sbjct: 108 ---KIIYVAPERLEMPGFQRFAQ---------------------------ERQISMVTVD 137
Query: 377 EAHCV 381
EAHC+
Sbjct: 138 EAHCI 142
>gi|399545042|ref|YP_006558350.1| ATP-dependent DNA helicase recQ [Marinobacter sp. BSs20148]
gi|399160374|gb|AFP30937.1| ATP-dependent DNA helicase recQ [Marinobacter sp. BSs20148]
Length = 686
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 87/241 (36%), Gaps = 85/241 (35%)
Query: 175 SGVSTSSASSVSNKKRSSLI-------------SDNEHGTLSFEELQALDDMEFANVVIF 221
S + SA+ + + RS+L+ S + LS E A+ E +F
Sbjct: 37 SEICYDSAAEIHSAARSALLHSGGLRVNTFIMYSHQDFEQLSSERPTAVQTPEQVLHEVF 96
Query: 222 GNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QDQ 260
G +FRPLQ K A D VL+PTGGGKSLCY QDQ
Sbjct: 97 GYDSFRPLQEDIVKELCAGGDALVLMPTGGGKSLCYQVPALVRPGTGIVVSPLIALMQDQ 156
Query: 261 IITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
+ L + G+ A FLNS QA A L G
Sbjct: 157 VNALK-ELGVRAAFLNSTMDFEQARATEYALMSG-------------------------E 190
Query: 321 CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
LLY PER++ ++ ++ LH +A F +DEAHC
Sbjct: 191 LDLLYCAPERLIQPRT----IELLHNT---------------------SIALFAIDEAHC 225
Query: 381 V 381
V
Sbjct: 226 V 226
>gi|372276821|ref|ZP_09512857.1| ATP-dependent DNA helicase RecQ [Pantoea sp. SL1_M5]
Length = 609
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q +++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQHFRPGQQTIINEALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A +LNS T Q V+ + R G V
Sbjct: 81 QVDQL-LANGVAAAYLNSTMTRDQQQTVMADCRTGRV----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER++ + + Q A VDEAH
Sbjct: 117 --KLLYIAPERLMMDNFLDSL-------------------------AHWQPAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|414079433|ref|YP_007000857.1| ATP-dependent DNA helicase RecQ [Anabaena sp. 90]
gi|413972712|gb|AFW96800.1| ATP-dependent DNA helicase RecQ [Anabaena sp. 90]
Length = 729
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 36/166 (21%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FRP Q Q + ++ +D V++PTGGGKSLC+Q + LK G+
Sbjct: 15 FGYDQFRPGQRQIIEDALENRDLMVVMPTGGGKSLCFQ---LPALLKPGLTV-------V 64
Query: 281 VSQAAAVLQELRQGLVLSQ--HYFLHQLIFVLTCASRKD---KPSCKLLYVTPERIVGNQ 335
VS A++Q+ + L + FL+ + SR++ KLLYV PER+V ++
Sbjct: 65 VSPLIALMQDQVEALRTNNISATFLNSSLNAYKVRSREEAIMNGKIKLLYVAPERLV-SE 123
Query: 336 SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F +L + K I + F +DEAHCV
Sbjct: 124 RFLPLLDVVKEKVGI--------------------STFAIDEAHCV 149
>gi|158320015|ref|YP_001512522.1| ATP-dependent DNA helicase RecQ [Alkaliphilus oremlandii OhILAs]
gi|158140214|gb|ABW18526.1| ATP-dependent DNA helicase RecQ [Alkaliphilus oremlandii OhILAs]
Length = 745
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
+G FR Q + ++ +D ++PTGGGKSLCYQ D
Sbjct: 12 YGYDNFRDGQDEIIDHILSGRDVLTIMPTGGGKSLCYQIPAMIMDGTAIVVSPLISLMKD 71
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL + GIPA F+NS S++ + +E ++G
Sbjct: 72 QVDTLQ-QMGIPAAFINSSLAFSESQRIFEEAKRG------------------------- 105
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER+ ++ F+E+++ SI++ ++ VDEAH
Sbjct: 106 EYKLLYVAPERL-ESEGFTELIR------SIKISMVA------------------VDEAH 140
Query: 380 CV 381
CV
Sbjct: 141 CV 142
>gi|397169212|ref|ZP_10492647.1| ATP-dependent DNA helicase [Alishewanella aestuarii B11]
gi|396089292|gb|EJI86867.1| ATP-dependent DNA helicase [Alishewanella aestuarii B11]
Length = 605
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 72/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG ++R Q + A + +DCFVLLPTGGGKSLCYQ D
Sbjct: 13 FGYSSWRSGQQEIISAVLQGRDCFVLLPTGGGKSLCYQLPALQLPGVTLVVSPLMSLMKD 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L GI A ++NS + VL +LR G
Sbjct: 73 QVDSLRAN-GIAAAYVNSSLSREAVLDVLNQLRYG------------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ SF E RL+ + + F +DEAH
Sbjct: 107 ELKLLYVAPERLL-QPSFLE-----------RLQEVGVSL-------------FAIDEAH 141
Query: 380 CV 381
C+
Sbjct: 142 CI 143
>gi|421066751|ref|ZP_15528313.1| ATP-dependent DNA helicase RecQ, partial [Pelosinus fermentans A12]
gi|392453276|gb|EIW30158.1| ATP-dependent DNA helicase RecQ, partial [Pelosinus fermentans A12]
Length = 608
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
+G FRP Q + + + K+D ++PTG GKSLC+Q D
Sbjct: 13 YGYTTFRPGQEKIITSLLGKKDTLAIMPTGAGKSLCFQIPALLLPGVTLVVSPLISLMKD 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN GIPATF+NS T+SQ +++ I+ C
Sbjct: 73 QVDALN-GVGIPATFINSSLTLSQ-------------------VNERIYNAKCGRY---- 108
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K++Y+ PER+ ++SF +KVLT ++ +DEAH
Sbjct: 109 --KIIYIAPERL-ESESFQAA-----------IKVLTISLL-------------AIDEAH 141
Query: 380 CV 381
CV
Sbjct: 142 CV 143
>gi|353240523|emb|CCA72389.1| related to QDE-3 QDE3 protein (involved in gene silencing)
[Piriformospora indica DSM 11827]
Length = 627
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 81/187 (43%), Gaps = 68/187 (36%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
IF R+FR Q +A ++++ +D FVL+PTGGGKSLCYQ
Sbjct: 228 IFQLRSFRKHQLEAIMSALSGKDVFVLMPTGGGKSLCYQLPAVCTTGTTRGVTIVVSPLI 287
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L GI AT L+S+Q V + LR LS+
Sbjct: 288 ALMDDQLKELQ-DLGIDATNLHSEQDVEMIKDTNKRLRS---LSE--------------- 328
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
DKP+ L+Y++PE++ + + ++L L+ + QLA FV
Sbjct: 329 --DKPA--LVYISPEKLTSSLALKDMLNQLYSRN--------------------QLARFV 364
Query: 375 VDEAHCV 381
+DE H +
Sbjct: 365 IDECHVL 371
>gi|150004558|ref|YP_001299302.1| ATP-dependent DNA helicase [Bacteroides vulgatus ATCC 8482]
gi|294776076|ref|ZP_06741571.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|423312434|ref|ZP_17290371.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
gi|149932982|gb|ABR39680.1| putative ATP-dependent DNA helicase [Bacteroides vulgatus ATCC
8482]
gi|294450068|gb|EFG18573.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|392688918|gb|EIY82202.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
Length = 605
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + +A++D VL+PTGGGKS+CYQ D
Sbjct: 9 FGYDSFRPLQQDIIQNILAQKDTLVLMPTGGGKSICYQLPALLMEGTAIVVSPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L GI A LNS ++ + +E QG +
Sbjct: 69 QVESLQAN-GIAARALNSSNNETENINLRRECLQGKI----------------------- 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PER++ +F L D+ Q++ F +DEAH
Sbjct: 105 --KLLYISPERLLIETNF-----------------LLKDI---------QISLFAIDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|90407207|ref|ZP_01215394.1| putative ATP-dependent DNA helicase RecQ [Psychromonas sp. CNPT3]
gi|90311630|gb|EAS39728.1| putative ATP-dependent DNA helicase RecQ [Psychromonas sp. CNPT3]
Length = 602
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 73/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG ++FR Q + + A +D V++PTGGGKSLC+Q D
Sbjct: 17 FGYKSFRAGQKEVIEQLCAGKDALVVMPTGGGKSLCFQIPALIQPGICIVISPLISLMKD 76
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL G+ A +LNS + Q +L ++ QG
Sbjct: 77 QVDTLQ-TCGVAAAYLNSSLSYPQQNQILNDMHQG------------------------- 110
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER++ F + RLK LT ++ F +DEAH
Sbjct: 111 KLKLLYIAPERLL-RHDFMQ-----------RLKTLTINL-------------FAIDEAH 145
Query: 380 CV 381
C+
Sbjct: 146 CI 147
>gi|20093292|ref|NP_619367.1| DNA helicase RecQ [Methanosarcina acetivorans C2A]
gi|19918649|gb|AAM07847.1| DNA helicase RecQ [Methanosarcina acetivorans C2A]
Length = 909
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG AFRPLQ + + + ++D FVL+PTGGGKS+CYQ D
Sbjct: 33 FGYTAFRPLQEEIIRDVLDRKDVFVLMPTGGGKSICYQLPSLLLDGVTVVVSPLISLMKD 92
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GI A +NS Q+ + V + FL +
Sbjct: 93 QVDGLEAN-GIAAACMNSTQSAREIRDV-----------KSAFLENRL------------ 128
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K+LY+ PER++ + + +KG I L F +DEAH
Sbjct: 129 --KILYIAPERLMMPGTIT-----FLKKGKISL--------------------FAIDEAH 161
Query: 380 CV 381
C+
Sbjct: 162 CI 163
>gi|307152715|ref|YP_003888099.1| RecQ family ATP-dependent DNA helicase [Cyanothece sp. PCC 7822]
gi|306982943|gb|ADN14824.1| ATP-dependent DNA helicase, RecQ family [Cyanothece sp. PCC 7822]
Length = 717
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 79/193 (40%), Gaps = 68/193 (35%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------ 257
L+ +E A FG FRP Q Q + ++ +D V++PTGGGKSLC+
Sbjct: 13 LNSLETALKQYFGYDNFRPGQRQIIEEALQNRDLLVIMPTGGGKSLCFQLPALLKPGLTV 72
Query: 258 ---------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
QDQ+ L L GI ATFLNS +S+ + R+ +L
Sbjct: 73 VVSPLISLMQDQVDAL-LDNGIGATFLNSSLGLSEIRS-----REMAIL----------- 115
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
K KLLYV PER+ L K + L + DV +
Sbjct: 116 ---------KNKIKLLYVAPERL------------LSEKFTPFLDKIALDVGI------- 147
Query: 369 QLAGFVVDEAHCV 381
+ F +DEAHCV
Sbjct: 148 --SAFAIDEAHCV 158
>gi|226227108|ref|YP_002761214.1| ATP-dependent DNA helicase RecQ [Gemmatimonas aurantiaca T-27]
gi|226090299|dbj|BAH38744.1| ATP-dependent DNA helicase RecQ [Gemmatimonas aurantiaca T-27]
Length = 598
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRP Q +A +A ++ +D ++LPTGGGKSLC+Q D
Sbjct: 25 FGYPDFRPPQIRAVEAVLSGRDALIVLPTGGGKSLCFQVPALVRDGLTIVISPLISLMKD 84
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL + GI A ++NS +VS+ A + R G
Sbjct: 85 QVETLARR-GIEAAYINSTLSVSEVADRMARARDG------------------------- 118
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
S +LLY+ PER+ + L+ L T VVL VDEAH
Sbjct: 119 SLRLLYLAPERMEAGRM---------------LQQLRTIGVVL----------LTVDEAH 153
Query: 380 CV 381
C+
Sbjct: 154 CI 155
>gi|196228960|ref|ZP_03127826.1| ATP-dependent DNA helicase RecQ [Chthoniobacter flavus Ellin428]
gi|196227241|gb|EDY21745.1| ATP-dependent DNA helicase RecQ [Chthoniobacter flavus Ellin428]
Length = 610
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 57/133 (42%), Gaps = 47/133 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + ++A +D F LLPTGGGKSLC+Q D
Sbjct: 15 FGYDSFRPLQEEIITDALAGRDVFALLPTGGGKSLCFQLPALLRDGLTVVVSPLIALMKD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L G+PATFLNS +A A + L +G
Sbjct: 75 QVDALTAT-GVPATFLNSTLDGDEARARFRGLHRG------------------------- 108
Query: 320 SCKLLYVTPERIV 332
+LLY PER++
Sbjct: 109 EFRLLYAAPERLM 121
>gi|119470517|ref|ZP_01613220.1| ATP-dependent DNA helicase [Alteromonadales bacterium TW-7]
gi|119446218|gb|EAW27495.1| ATP-dependent DNA helicase [Alteromonadales bacterium TW-7]
Length = 607
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 71/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q A++ QD VLLPTGGGKS+CY Q
Sbjct: 22 VFGYSEFRDGQKAVIDAALNAQDTLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+ A ++N+ + V Q+L QGL+
Sbjct: 82 DQVAQLQ-ALGVKAAYVNNSLAREEQQRVYQQLHQGLI---------------------- 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PE+++ + F E L L +++ F +DEA
Sbjct: 119 ---KLLYVAPEKVL-QRDFLERLSHL------------------------KISLFAIDEA 150
Query: 379 HCV 381
HCV
Sbjct: 151 HCV 153
>gi|148226526|ref|NP_001089858.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus laevis]
gi|80476410|gb|AAI08556.1| MGC131022 protein [Xenopus laevis]
Length = 652
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 72/181 (39%), Gaps = 65/181 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
F + FR LQ + A+++ +D F+++PTGGGKSLCYQ D
Sbjct: 89 FQLQTFRSLQLETINATMSGRDVFLIMPTGGGKSLCYQLPALCSDGFTLVICPLISLMED 148
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ LN + G+ AT LN+ + V E+ K
Sbjct: 149 QLMVLN-RLGVSATSLNASSSKEHVKWVHGEMMN-----------------------KKS 184
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE++ ++ F L+ ++ G LA VDE H
Sbjct: 185 QLKLLYVTPEKVAKSKVFMSRLEKAYQGG--------------------LLARVAVDEVH 224
Query: 380 C 380
C
Sbjct: 225 C 225
>gi|359449260|ref|ZP_09238757.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20480]
gi|392537893|ref|ZP_10285030.1| ATP-dependent DNA helicase [Pseudoalteromonas marina mano4]
gi|358044909|dbj|GAA75006.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20480]
Length = 607
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 71/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q A++ QD VLLPTGGGKS+CY Q
Sbjct: 22 VFGYSEFRDGQKAVIDAALNAQDTLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+ A ++N+ + V Q+L QGL+
Sbjct: 82 DQVAQLQ-ALGVKAAYVNNSLAREEQQRVYQQLHQGLI---------------------- 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PE+++ + F E L L +++ F +DEA
Sbjct: 119 ---KLLYVAPEKVL-QRDFLERLSHL------------------------KISLFAIDEA 150
Query: 379 HCV 381
HCV
Sbjct: 151 HCV 153
>gi|411116551|ref|ZP_11389038.1| ATP-dependent DNA helicase RecQ [Oscillatoriales cyanobacterium
JSC-12]
gi|410712654|gb|EKQ70155.1| ATP-dependent DNA helicase RecQ [Oscillatoriales cyanobacterium
JSC-12]
Length = 741
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 71/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG +FRP Q Q + ++ QD V++PTGGGKSLCY QD
Sbjct: 22 FGYDSFRPGQRQIIEKALQNQDLLVVMPTGGGKSLCYQLPALLKPGLTVVVSPLIALMQD 81
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GIPATFLNS S + L+E + ++ +
Sbjct: 82 QVQALQ-DNGIPATFLNS----SLSGTELRERERAILDGE-------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KL+Y+ PER++ + L ++ +A +DEAH
Sbjct: 117 -MKLVYIAPERLLNEGRLAGWLSQVY------------------------VAAIAIDEAH 151
Query: 380 CV 381
CV
Sbjct: 152 CV 153
>gi|387814250|ref|YP_005429733.1| ATP-dependent DNA helicase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381339263|emb|CCG95310.1| ATP-dependent DNA helicase [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 625
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 67/183 (36%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG +FRPLQ + V D VL+PTGGGKSLCY Q
Sbjct: 29 VFGYESFRPLQGDIVREVVNGGDALVLMPTGGGKSLCYQVPALVRPGTAIVISPLIALMQ 88
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A FLNS QA A L G
Sbjct: 89 DQVAALR-ELGVKAAFLNSTMDFEQARATEYALATG------------------------ 123
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLY PER++ ++ ++ LH L+ F +DEA
Sbjct: 124 -KLDLLYCAPERLIQPRT----IELLHNA---------------------SLSLFAIDEA 157
Query: 379 HCV 381
HCV
Sbjct: 158 HCV 160
>gi|282898834|ref|ZP_06306821.1| ATP-dependent DNA helicase RecQ [Cylindrospermopsis raciborskii
CS-505]
gi|281196361|gb|EFA71271.1| ATP-dependent DNA helicase RecQ [Cylindrospermopsis raciborskii
CS-505]
Length = 719
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 36/166 (21%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FRP Q Q + ++ +D V++PTGGGKSLC+Q + LK G+
Sbjct: 14 FGYDQFRPGQRQIIEDALENRDLMVVMPTGGGKSLCFQ---LPALLKPGLTV-------V 63
Query: 281 VSQAAAVLQELRQGLVLSQ--HYFLHQLIFVLTCASRKD---KPSCKLLYVTPERIVGNQ 335
VS A++Q+ + L + ++ + SR++ KLLYV PER+V ++
Sbjct: 64 VSPLIALMQDQVEALRNNNISATLINSSLTTYQVRSREEAIMNGKVKLLYVAPERLV-SE 122
Query: 336 SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F +L + K LA FV+DEAHCV
Sbjct: 123 RFLPILDVVKEKFG--------------------LANFVIDEAHCV 148
>gi|392959946|ref|ZP_10325423.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans DSM 17108]
gi|421053587|ref|ZP_15516563.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans B4]
gi|421058239|ref|ZP_15520955.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans B3]
gi|421071053|ref|ZP_15532176.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans A11]
gi|392442012|gb|EIW19625.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans B4]
gi|392447400|gb|EIW24641.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans A11]
gi|392455915|gb|EIW32686.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans DSM 17108]
gi|392461208|gb|EIW37428.1| ATP-dependent DNA helicase RecQ [Pelosinus fermentans B3]
Length = 707
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
+G FRP Q + + + K+D ++PTG GKSLC+Q D
Sbjct: 13 YGYTTFRPGQEKIITSLLGKKDTLAIMPTGAGKSLCFQIPALLLPGVTLVVSPLISLMKD 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN GIPATF+NS T+SQ +++ I+ C
Sbjct: 73 QVDALN-GVGIPATFINSSLTLSQ-------------------VNERIYNAKCGRY---- 108
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K++Y+ PER+ ++SF +KVLT ++ +DEAH
Sbjct: 109 --KIIYIAPERL-ESESFQAA-----------IKVLTISLL-------------AIDEAH 141
Query: 380 CV 381
CV
Sbjct: 142 CV 143
>gi|451846770|gb|EMD60079.1| hypothetical protein COCSADRAFT_100311 [Cochliobolus sativus
ND90Pr]
Length = 485
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 36/176 (20%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIP 271
+++F +F AFRP Q + A++ QD FV T GKSLCYQ + + FGI
Sbjct: 11 NIDFTLRKVFKKAAFRPPQREVVLATLEGQDVFVQAATSFGKSLCYQ---LPAVVDFGIT 67
Query: 272 AT------FLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLY 325
+N+Q + A + E ++ +++ L C P +LLY
Sbjct: 68 IVISPLLALMNNQVASLRNANIRVETINSTTPTED--RKRILADLQCG----HPLTRLLY 121
Query: 326 VTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
VTPE G+ F ++L+ +H QR+LA VDEAHCV
Sbjct: 122 VTPEFCQGDH-FRKILRVIH--------------------SQRELARIAVDEAHCV 156
>gi|33866490|ref|NP_898049.1| ATP-dependent DNA helicase [Synechococcus sp. WH 8102]
gi|33633268|emb|CAE08473.1| putative ATP-dependent DNA helicase [Synechococcus sp. WH 8102]
Length = 495
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 77/175 (44%), Gaps = 32/175 (18%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKF 268
+D +E A FG FR Q +A ++ +D +LPTGGGKSLCYQ +I L
Sbjct: 3 VDSLETALHTHFGWSRFRAGQRPVVEAVLSGRDALAVLPTGGGKSLCYQLPALIRGGLVV 62
Query: 269 GI-PATFLNSQQTVSQAAAVLQELRQGLVLS-QHYFLHQLIFVLTCASRKDKPSCKLLYV 326
I P L Q VLQ R+G+ + H L + A+ +D+ S +LLY+
Sbjct: 63 VISPLVALMEDQ-------VLQLRRRGISAACLHAGLDPVRRQQAMAALRDE-SLRLLYL 114
Query: 327 TPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
PER+ G T ++ H + +L VDEAHC+
Sbjct: 115 APERLQGE---------------------ATQRLLETHAAEGRLVALAVDEAHCI 148
>gi|405951020|gb|EKC18968.1| ATP-dependent DNA helicase Q1 [Crassostrea gigas]
Length = 338
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 71/182 (39%), Gaps = 65/182 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG RP+Q Q +++ +DC +++PTGGGKSLC+Q
Sbjct: 112 VFGISELRPMQLQTMNVTMSGKDCILIMPTGGGKSLCFQLPALLSKGVTLVVSPLVSLME 171
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+I L + + A LN+ ++ AV A
Sbjct: 172 DQVIALE-NYNVDAVMLNASTDRNRVTAVQN-----------------------AMTDKT 207
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+ KLLYVTPE++ ++ F L+ ++ G + + V+DE
Sbjct: 208 ATMKLLYVTPEKLAKSKRFMAKLEKMYAMG--------------------RFSRLVIDEV 247
Query: 379 HC 380
HC
Sbjct: 248 HC 249
>gi|265751367|ref|ZP_06087430.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|345514773|ref|ZP_08794279.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|423228784|ref|ZP_17215190.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
gi|423247595|ref|ZP_17228644.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|229437610|gb|EEO47687.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|263238263|gb|EEZ23713.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|392631925|gb|EIY25892.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|392635523|gb|EIY29422.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
Length = 605
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + +A++D VL+PTGGGKS+CYQ D
Sbjct: 9 FGYDSFRPLQQDIIQNILAQKDTLVLMPTGGGKSICYQLPALLMEGTAIVVSPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L GI A LNS ++ + +E QG +
Sbjct: 69 QVESLQAN-GIAARALNSSNNETENINLRRECLQGKI----------------------- 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PER++ +F L D+ Q++ F +DEAH
Sbjct: 105 --KLLYISPERLLIETNF-----------------LLKDI---------QISLFAIDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|212693848|ref|ZP_03301976.1| hypothetical protein BACDOR_03370 [Bacteroides dorei DSM 17855]
gi|237708472|ref|ZP_04538953.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 9_1_42FAA]
gi|212663600|gb|EEB24174.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei DSM 17855]
gi|229457401|gb|EEO63122.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 9_1_42FAA]
Length = 605
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + +A++D VL+PTGGGKS+CYQ D
Sbjct: 9 FGYDSFRPLQQDIIQNILAQKDTLVLMPTGGGKSICYQLPALLMEGTAIVVSPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L GI A LNS ++ + +E QG +
Sbjct: 69 QVESLQAN-GIAARALNSSNNETENINLRRECLQGKI----------------------- 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PER++ +F L D+ Q++ F +DEAH
Sbjct: 105 --KLLYISPERLLIETNF-----------------LLKDI---------QISLFAIDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|374288119|ref|YP_005035204.1| putative ATP-dependent DNA helicase [Bacteriovorax marinus SJ]
gi|301166660|emb|CBW26236.1| putative ATP-dependent DNA helicase [Bacteriovorax marinus SJ]
Length = 637
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 86/205 (41%), Gaps = 77/205 (37%)
Query: 202 LSFEELQALDDMEFANVV---IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ 258
LSF A D E A V +FG+ FR Q + + +D VL+PTGGGKSLCYQ
Sbjct: 10 LSFSFFDADDYKESAREVLRTVFGHHDFRDQQEKIVTEVLEGRDALVLMPTGGGKSLCYQ 69
Query: 259 ---------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVL 297
DQ+ TLN + G+ A +LNS + ++ + +LRQG V
Sbjct: 70 IPAIVRKGVGIVISPLISLMEDQVSTLN-EMGVEAYYLNSSLSREESNEIEAKLRQGQV- 127
Query: 298 SQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTT 357
+LLY+ PER++ Q ++ L +L++
Sbjct: 128 ------------------------ELLYLAPERLL--QPYT-------------LNMLSS 148
Query: 358 -DVVVLPHTCQRQLAGFVVDEAHCV 381
DV V+ +DEAHCV
Sbjct: 149 IDVSVI-----------AIDEAHCV 162
>gi|313148719|ref|ZP_07810912.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
gi|313137486|gb|EFR54846.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
Length = 607
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 75/182 (41%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + + ++K+D VL+PTGGGKS+CYQ D
Sbjct: 15 FGYDSFRPLQEEIIRNLMSKRDALVLMPTGGGKSICYQLPALLMEGTAIVISPLISLMKD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L GIPA LNS S+ A LR+ C S K
Sbjct: 75 QVESLCAN-GIPAGALNSSNDESENA----NLRRA-----------------CISGK--- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + L R +I L F VDEAH
Sbjct: 110 -LKLLYISPEKLLSEADY------LLRDMTISL--------------------FAVDEAH 142
Query: 380 CV 381
C+
Sbjct: 143 CI 144
>gi|335356919|ref|ZP_08548789.1| ATP-dependent DNA helicase RecQ [Lactobacillus animalis KCTC 3501]
Length = 591
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG F+ Q + + ++ LLPTGGGKSLCYQ D
Sbjct: 11 FGYTEFKAGQKKVIDLLLGHKNTLALLPTGGGKSLCYQIPALLEDGLTLVISPLISLMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L + GIPA +NS Q A AVL + R+ H+L
Sbjct: 71 QVDSLQ-QNGIPAALINSSQEFETAKAVLAKARR----------HEL------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+TPER+ NQ F E+L+ L S+ L VDEAH
Sbjct: 107 --KLLYITPERL-ENQFFLELLQTL----SVSL--------------------VAVDEAH 139
Query: 380 CV 381
C+
Sbjct: 140 CI 141
>gi|406992253|gb|EKE11639.1| hypothetical protein ACD_15C00045G0022 [uncultured bacterium]
Length = 535
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 71/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
F FR Q + ++ + K+D L+PTGGGKSLCYQ D
Sbjct: 10 FSFSQFRSGQKEIIESILEKKDVVALMPTGGGKSLCYQLPAILSENTTVIISPLIALMKD 69
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L + GIPATF+NS + LQ++R G
Sbjct: 70 QVDSLAAR-GIPATFINSSLEFPEMEKRLQDIRLG------------------------- 103
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K++Y+ PER N SF ++ L +++ F VDEAH
Sbjct: 104 KTKIVYIAPERF-ANISFRKLFSTL------------------------EISLFAVDEAH 138
Query: 380 CV 381
CV
Sbjct: 139 CV 140
>gi|326469853|gb|EGD93862.1| DNA helicase [Trichophyton tonsurans CBS 112818]
gi|326479076|gb|EGE03086.1| RecQ family helicase RecQ [Trichophyton equinum CBS 127.97]
Length = 587
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 66/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++F +FG ++FRPLQ + +A++ D F+ T GKSLC+Q
Sbjct: 7 DIDFTLRRVFGKKSFRPLQREVIQAAIEGHDVFLQAATSFGKSLCFQLPAVVAHGVTVVV 66
Query: 259 --------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
DQ+ +L + IP +NS S+ +L + +LS H
Sbjct: 67 SPLLSLMVDQVASLEAR-AIPVATINSTTPGSKRKEILAD-----ILSGH---------- 110
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE ++F + +H++G +L
Sbjct: 111 --------PVTRLLYVTPE-FCQTETFRRSISTVHQQG--------------------EL 141
Query: 371 AGFVVDEAHCV 381
+DEAHCV
Sbjct: 142 TRVAIDEAHCV 152
>gi|390349584|ref|XP_795300.3| PREDICTED: ATP-dependent DNA helicase Q5-like [Strongylocentrotus
purpuratus]
Length = 1223
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 85/205 (41%), Gaps = 76/205 (37%)
Query: 201 TLSFEELQ-ALDDMEFANVVIFGNRAFRP-LQHQACKASV-AKQDCFVLLPTGGGKSLCY 257
T SF LQ L+D+ FG +F+ LQ + + AK+D F+L+PTG GKSLCY
Sbjct: 53 TSSFSSLQDKLEDL-------FGYASFKSELQKKGTEEVFKAKKDVFILMPTGAGKSLCY 105
Query: 258 Q---------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLV 296
Q DQ+ L+ + GI A LNS+ + ++ +V
Sbjct: 106 QLPATCKKGVTLVISPLIALIEDQLTHLD-ELGIRAESLNSK---------IPAAKRKMV 155
Query: 297 LSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLT 356
+S Y KP K+LY+TPE +F +LK L+ +G
Sbjct: 156 MSDLY--------------SKKPKIKMLYITPE-TAATSTFMTILKNLNNRG-------- 192
Query: 357 TDVVVLPHTCQRQLAGFVVDEAHCV 381
G VVDEAHCV
Sbjct: 193 ------------LFNGIVVDEAHCV 205
>gi|120554360|ref|YP_958711.1| ATP-dependent DNA helicase RecQ [Marinobacter aquaeolei VT8]
gi|120324209|gb|ABM18524.1| ATP-dependent DNA helicase RecQ [Marinobacter aquaeolei VT8]
Length = 625
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 67/183 (36%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG +FRPLQ + V D VL+PTGGGKSLCY Q
Sbjct: 29 VFGYESFRPLQGDIVREVVNGGDALVLMPTGGGKSLCYQVPALVRPGTAIVISPLIALMQ 88
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A FLNS QA A L G
Sbjct: 89 DQVAALR-ELGVKAAFLNSTMDFEQARATEYALATG------------------------ 123
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLY PER++ ++ ++ LH L+ F +DEA
Sbjct: 124 -ELDLLYCAPERLIQPRT----IELLHNA---------------------SLSLFAIDEA 157
Query: 379 HCV 381
HCV
Sbjct: 158 HCV 160
>gi|345564877|gb|EGX47836.1| hypothetical protein AOL_s00083g48 [Arthrobotrys oligospora ATCC
24927]
Length = 1720
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 73/195 (37%), Gaps = 67/195 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D+ A F + FR Q +A A++ D FVL+PTGGGKSLCYQ
Sbjct: 868 DVARALKTTFKLKGFRANQLEAINATLGGNDVFVLMPTGGGKSLCYQLPAVVSSGKTKGI 927
Query: 259 ------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
DQ+ L I A NS T + +L+EL+
Sbjct: 928 TFVISPLLSLMEDQVDHLGA-LKIRAFMFNSSITAEERREILKELK-------------- 972
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
S S +LLYVTPE + ++ + LH++ I
Sbjct: 973 -------SPDAATSIQLLYVTPEMLASSKMMEAAMGSLHKRNLI---------------- 1009
Query: 367 QRQLAGFVVDEAHCV 381
A V+DEAHCV
Sbjct: 1010 ----ARVVIDEAHCV 1020
>gi|327294583|ref|XP_003231987.1| RecQ family helicase [Trichophyton rubrum CBS 118892]
gi|326465932|gb|EGD91385.1| RecQ family helicase [Trichophyton rubrum CBS 118892]
Length = 586
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 66/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++F +FG ++FRPLQ + +A++ D F+ T GKSLC+Q
Sbjct: 7 DIDFTLRRVFGKKSFRPLQREVIQAAIEGHDVFLQAATSFGKSLCFQLPAVVAHGVTVVV 66
Query: 259 --------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
DQ+ +L + IP +NS S+ +L + +LS H
Sbjct: 67 SPLLSLMVDQVASLEAR-AIPVATINSTTPGSKRKEILAD-----ILSGH---------- 110
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE ++F + +H++G +L
Sbjct: 111 --------PVTRLLYVTPE-FCQTETFRRSISTVHQQG--------------------EL 141
Query: 371 AGFVVDEAHCV 381
+DEAHCV
Sbjct: 142 TRVAIDEAHCV 152
>gi|440799208|gb|ELR20268.1| ATPdependent DNA helicase, RecQ subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 608
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 73/168 (43%), Gaps = 51/168 (30%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------DQI-ITLNLKFGIPAT 273
FG+ FRP Q + + ++ QD FVL+PTG GKSLC+Q D I + ++ GI A
Sbjct: 9 FGHPQFRPSQREVMVSILSGQDTFVLMPTGAGKSLCFQLPALVLDGITVVVSPLIGISAA 68
Query: 274 FLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVG 333
L S Q + ++L Q + S+ +P KLLYVTPE ++
Sbjct: 69 LLCSSQKKDE-----RDLIQRDITSK------------------QPKTKLLYVTPE-LID 104
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
Q F L L +LA FVVDEAH +
Sbjct: 105 TQGFLNTLYSLRN--------------------NNKLAMFVVDEAHAI 132
>gi|298251484|ref|ZP_06975287.1| ATP-dependent DNA helicase RecQ [Ktedonobacter racemifer DSM 44963]
gi|297546076|gb|EFH79944.1| ATP-dependent DNA helicase RecQ [Ktedonobacter racemifer DSM 44963]
Length = 739
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 73/181 (40%), Gaps = 66/181 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG AF P Q + + +++ +D F L+PTG GKSL YQ + LN
Sbjct: 12 FGYEAFLPGQREVIEQALSGRDAFALMPTGAGKSLIYQLSGLLLNGVSIIISPLIALMQD 71
Query: 266 ----LKF-GIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
LK GIPATFLNS + S+ + +E+ QG
Sbjct: 72 QVDRLKTNGIPATFLNSALSASERSQREREILQG-------------------------K 106
Query: 321 CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
KL+YV PER++ Q+F L + + + L VDEAHC
Sbjct: 107 LKLVYVAPERLL-TQTFLTFLDEVQERVGLGL--------------------IAVDEAHC 145
Query: 381 V 381
V
Sbjct: 146 V 146
>gi|282896865|ref|ZP_06304871.1| ATP-dependent DNA helicase RecQ [Raphidiopsis brookii D9]
gi|281198274|gb|EFA73164.1| ATP-dependent DNA helicase RecQ [Raphidiopsis brookii D9]
Length = 719
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 71/182 (39%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG FRP Q Q + ++ +D V++PTGGGKSLC+ QD
Sbjct: 14 FGYDQFRPGQRQIIEDALENRDLMVVMPTGGGKSLCFQLPALLKPGLTVVVSPLIALMQD 73
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L I AT +NS T Q + + + G V
Sbjct: 74 QVEALR-NNNISATLINSSLTTYQVRSREEAIMNGKV----------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER+V ++ F +L + K LA FV+DEAH
Sbjct: 110 --KLLYVAPERLV-SERFLPILDVVKEKFG--------------------LANFVIDEAH 146
Query: 380 CV 381
CV
Sbjct: 147 CV 148
>gi|37522198|ref|NP_925575.1| ATP-dependent DNA helicase [Gloeobacter violaceus PCC 7421]
gi|35213198|dbj|BAC90570.1| ATP-dependent DNA helicase [Gloeobacter violaceus PCC 7421]
Length = 746
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 72/182 (39%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG+ FRP Q + + ++A D +L+PTGGGKSL YQ D
Sbjct: 26 FGHERFRPGQRRIVELAIAGHDQLILMPTGGGKSLTYQLPALLLPGLTVVVSPLIALMHD 85
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + GI ATFLNS + Q + QG
Sbjct: 86 QVDRLR-ENGIAATFLNSTLAAGERTRREQAIAQG------------------------- 119
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PER++ + + L+ + R+G + L VDEAH
Sbjct: 120 RMKLLYLSPERLLSEECLA-FLEYVQRQGGLSL--------------------LAVDEAH 158
Query: 380 CV 381
CV
Sbjct: 159 CV 160
>gi|339243055|ref|XP_003377453.1| ATP-dependent DNA helicase Q1 [Trichinella spiralis]
gi|316973743|gb|EFV57302.1| ATP-dependent DNA helicase Q1 [Trichinella spiralis]
Length = 605
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 33/167 (19%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNL-KFGI---PATFL 275
IFG +FRPLQ A A ++ +D + + TGGGKSL YQ + N +F + P L
Sbjct: 81 IFGMNSFRPLQLSAMNAILSGRDVLLTMSTGGGKSLTYQLPAVLGNASQFTLVISPLVSL 140
Query: 276 NSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCK--LLYVTPERIVG 333
Q +S + + ++L QH ++ +L + + P CK LLYVTPER+
Sbjct: 141 MEDQVISLNTRGI----EAVLLYQHTPPEEMKRIL---AEMNSPGCKFRLLYVTPERLAK 193
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
++ F L+ ++ G ++L +DE HC
Sbjct: 194 SKRFMAKLEKAYQAGLLKL--------------------IAIDEVHC 220
>gi|423278476|ref|ZP_17257390.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
gi|404586486|gb|EKA91059.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
Length = 601
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 75/182 (41%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + + ++K+D VL+PTGGGKS+CYQ D
Sbjct: 9 FGYDSFRPLQEEIIRNLMSKRDALVLMPTGGGKSICYQLPALLMEGTAIVISPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L GIPA LNS S+ A LR+ C S K
Sbjct: 69 QVESLCAN-GIPAGALNSSNDESENA----NLRRA-----------------CISGK--- 103
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + L R +I L F VDEAH
Sbjct: 104 -LKLLYISPEKLLSEADY------LLRDMTISL--------------------FAVDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|164655522|ref|XP_001728890.1| hypothetical protein MGL_3884 [Malassezia globosa CBS 7966]
gi|159102778|gb|EDP41676.1| hypothetical protein MGL_3884 [Malassezia globosa CBS 7966]
Length = 841
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 37/171 (21%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQ 278
IF + FR Q +A A+++ +D F L+PTGGGKSLCYQ ITL G+
Sbjct: 189 IFLLKEFRADQLEAINATLSGRDVFCLMPTGGGKSLCYQLPSTITLGRTNGLTVVVSPLL 248
Query: 279 QTV-SQAAAVLQELRQGLVLS-------QHYFLHQLIFVLTCASRKDKPSCKLLYVTPER 330
+ +Q ++L++ + ++ + Y +L+ RK+ + +LLYVTPE
Sbjct: 249 ALIHNQVKSLLRKDVPAMAITGDMSDADRRYASSELL-------RKNI-NVRLLYVTPEF 300
Query: 331 IVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
I ++ S++L+ L++ QLA FV+DEAHCV
Sbjct: 301 ISKSRLASQLLQHLYQT--------------------HQLARFVIDEAHCV 331
>gi|452005277|gb|EMD97733.1| hypothetical protein COCHEDRAFT_1190502 [Cochliobolus
heterostrophus C5]
Length = 485
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 36/176 (20%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIP 271
+++F +F AFRP Q + A++ QD FV T GKSLCYQ + + FGI
Sbjct: 11 NIDFTLRKVFKKAAFRPPQREVVLATLEGQDVFVQAATSFGKSLCYQ---LPAVVDFGIT 67
Query: 272 AT------FLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLY 325
+N+Q + A + E ++ +++ L C P +LLY
Sbjct: 68 IVISPLLALMNNQVASLRNANIRVETINSTTPTED--RKRILADLQCG----HPLTRLLY 121
Query: 326 VTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
VTPE G+ F ++L+ +H QR+LA VDEAHCV
Sbjct: 122 VTPEFCQGDH-FRKILRVIH--------------------SQRELARIAVDEAHCV 156
>gi|407697072|ref|YP_006821860.1| ATP-dependent DNA helicase RecQ [Alcanivorax dieselolei B5]
gi|407254410|gb|AFT71517.1| ATP-dependent DNA helicase RecQ [Alcanivorax dieselolei B5]
Length = 599
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 69/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q V+ D VL+PTGGGKSLCY Q
Sbjct: 12 VFGYHEFRNQQAAIIDTLVSGGDALVLMPTGGGKSLCYQIPALAREGVGVVVSPLIALMQ 71
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ LN G+ A FLNS +A + Q++R G
Sbjct: 72 DQVDALN-ALGVSAGFLNSTLDAGRARELEQQVRDG------------------------ 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+ LLYV PER+ + + L+ LH Q LA F +DEA
Sbjct: 107 -TLDLLYVAPERL----TQARTLELLH---------------------QSPLALFAIDEA 140
Query: 379 HCV 381
HCV
Sbjct: 141 HCV 143
>gi|419765474|ref|ZP_14291711.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397741738|gb|EJK88959.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 608
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + ++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS Q+ Q V+ R G V
Sbjct: 81 QVDQL-LANGVAAACLNSTQSREQQQEVMAGCRSGQV----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLY+ PER++ + L H LA VDEAH
Sbjct: 117 --RLLYIAPERLMLDN-------------------------FLEHLANWNLAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|326803569|ref|YP_004321387.1| ATP-dependent DNA helicase RecQ [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650946|gb|AEA01129.1| ATP-dependent DNA helicase RecQ [Aerococcus urinae
ACS-120-V-Col10a]
Length = 596
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + ++ +A +D +LPTGGGKS+CYQ D
Sbjct: 11 FGYKTFRPGQKELIESILAGRDSLGILPTGGGKSICYQLPALILPGITLVISPLISLMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +LN + GI + +LNS Q+ AVL + G V
Sbjct: 71 QVDSLN-EHGIHSVYLNSSQSSEDYFAVLDRIHSGQV----------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KL+YV+PER+ ++SF + L D LP L +DEAH
Sbjct: 107 --KLIYVSPERL-KSESFLQ---------------LAND---LP------LDQIAIDEAH 139
Query: 380 CV 381
CV
Sbjct: 140 CV 141
>gi|257440203|ref|ZP_05615958.1| ATP-dependent DNA helicase RecQ [Faecalibacterium prausnitzii
A2-165]
gi|257197237|gb|EEU95521.1| ATP-dependent DNA helicase, RecQ family [Faecalibacterium
prausnitzii A2-165]
Length = 387
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 74/185 (40%), Gaps = 76/185 (41%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG +FRP Q + +A QD ++PTG GKS+CYQ
Sbjct: 11 VFGYDSFRPGQEEIVSRLLAGQDVLAVMPTGAGKSICYQVPALLLPGITIVVSPLVSLMK 70
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L ++ G+ A FLN+ T +Q A +L+ R+G
Sbjct: 71 DQVGAL-VQAGVAAAFLNNSLTDNQKALMLRRAREGWY---------------------- 107
Query: 319 PSCKLLYVTPERI--VGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
K++YV PER+ G Q F++ +R+++ VD
Sbjct: 108 ---KIIYVAPERLEMPGFQRFAQ---------------------------EREISMVTVD 137
Query: 377 EAHCV 381
EAHC+
Sbjct: 138 EAHCI 142
>gi|152972806|ref|YP_001337952.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|329997483|ref|ZP_08302785.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. MS 92-3]
gi|449059651|ref|ZP_21737339.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae hvKP1]
gi|150957655|gb|ABR79685.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|328539051|gb|EGF65090.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. MS 92-3]
gi|448874669|gb|EMB09708.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae hvKP1]
Length = 608
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + ++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS Q+ Q V+ R G V
Sbjct: 81 QVDQL-LANGVAAACLNSTQSREQQQEVMAGCRSGQV----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLY+ PER++ + L H LA VDEAH
Sbjct: 117 --RLLYIAPERLMLDN-------------------------FLEHLANWNLAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|443467985|ref|ZP_21058238.1| ATP-dependent DNA helicase RecQ [Pseudomonas pseudoalcaligenes
KF707]
gi|442897016|gb|ELS24067.1| ATP-dependent DNA helicase RecQ [Pseudomonas pseudoalcaligenes
KF707]
Length = 708
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 70/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG AFR Q + + D VL+PTGGGKSLCYQ
Sbjct: 12 VFGYDAFRGNQAAIIERVASGGDALVLMPTGGGKSLCYQVPALLRDGLTVVVSPLIALMD 71
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ TL+ + G+PA LNS + + LRQG
Sbjct: 72 DQVATLD-ELGVPAVALNSTLSAEAQREIADRLRQG------------------------ 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLY+ PER+V + +L L R LP + F +DEA
Sbjct: 107 -EIKLLYLAPERLVQPR----MLAFLQR---------------LP------IGLFAIDEA 140
Query: 379 HCV 381
HCV
Sbjct: 141 HCV 143
>gi|392389520|ref|YP_006426123.1| RecQ familyATP-dependent DNA helicase [Ornithobacterium
rhinotracheale DSM 15997]
gi|390520598|gb|AFL96329.1| ATP-dependent DNA helicase, RecQ family [Ornithobacterium
rhinotracheale DSM 15997]
Length = 627
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
+G FR Q + ++ +A +D F LLPTGGGKSLC+Q D
Sbjct: 13 WGYSEFRAPQKEIIESILAGKDTFALLPTGGGKSLCFQIPALMMEGVCVVISPLVALMKD 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L K GI A FL S+ T ++ +R G V
Sbjct: 73 QVQSLKKK-GIKAEFLTSENTEQSPQVLMDNVRYGGV----------------------- 108
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PER+ SF L+ L +++ F +DEAH
Sbjct: 109 --KLLYISPERM-AQTSFKSFLENL------------------------KISYFAIDEAH 141
Query: 380 CV 381
C+
Sbjct: 142 CI 143
>gi|238892418|ref|YP_002917152.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|365144577|ref|ZP_09348793.1| ATP-dependent DNA helicase recQ [Klebsiella sp. 4_1_44FAA]
gi|378976322|ref|YP_005224463.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|386037440|ref|YP_005957353.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae KCTC 2242]
gi|402783066|ref|YP_006638612.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|419976110|ref|ZP_14491512.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419981887|ref|ZP_14497157.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419987417|ref|ZP_14502537.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419992987|ref|ZP_14507936.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419999205|ref|ZP_14513983.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420004974|ref|ZP_14519604.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420010567|ref|ZP_14525038.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420016807|ref|ZP_14531094.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420022207|ref|ZP_14536378.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420027870|ref|ZP_14541857.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420033622|ref|ZP_14547424.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420039320|ref|ZP_14552956.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420045195|ref|ZP_14558666.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420051125|ref|ZP_14564416.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420056758|ref|ZP_14569910.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420061820|ref|ZP_14574803.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420068079|ref|ZP_14580864.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420073504|ref|ZP_14586129.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420079309|ref|ZP_14591756.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420085306|ref|ZP_14597536.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421908873|ref|ZP_16338705.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421917229|ref|ZP_16346791.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424833268|ref|ZP_18257996.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424930893|ref|ZP_18349265.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425084062|ref|ZP_18487159.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425094091|ref|ZP_18497174.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428151187|ref|ZP_18998930.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428934219|ref|ZP_19007747.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae JHCK1]
gi|428939135|ref|ZP_19012250.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae VA360]
gi|238544734|dbj|BAH61085.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|339764568|gb|AEK00789.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae KCTC 2242]
gi|363648000|gb|EHL87187.1| ATP-dependent DNA helicase recQ [Klebsiella sp. 4_1_44FAA]
gi|364515733|gb|AEW58861.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397341372|gb|EJJ34552.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397342014|gb|EJJ35183.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397344702|gb|EJJ37833.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397358598|gb|EJJ51314.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397359601|gb|EJJ52294.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397363627|gb|EJJ56265.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397374431|gb|EJJ66767.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397378264|gb|EJJ70477.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397385030|gb|EJJ77135.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397392581|gb|EJJ84369.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397394580|gb|EJJ86306.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397403296|gb|EJJ94873.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397409845|gb|EJK01145.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397410215|gb|EJK01502.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397420262|gb|EJK11348.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397427007|gb|EJK17798.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397429873|gb|EJK20579.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397437837|gb|EJK28380.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397443829|gb|EJK34130.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397449321|gb|EJK39461.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402543905|gb|AFQ68054.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405597672|gb|EKB70935.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405610253|gb|EKB83062.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407805080|gb|EKF76331.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|410117240|emb|CCM81330.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410120477|emb|CCM89416.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414710718|emb|CCN32422.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426303386|gb|EKV65559.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae JHCK1]
gi|426304490|gb|EKV66633.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae VA360]
gi|427538860|emb|CCM95068.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 608
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + ++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS Q+ Q V+ R G V
Sbjct: 81 QVDQL-LANGVAAACLNSTQSREQQQEVMAGCRSGQV----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLY+ PER++ + L H LA VDEAH
Sbjct: 117 --RLLYIAPERLMLDN-------------------------FLEHLANWNLAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|375109707|ref|ZP_09755949.1| ATP-dependent DNA helicase [Alishewanella jeotgali KCTC 22429]
gi|374570229|gb|EHR41370.1| ATP-dependent DNA helicase [Alishewanella jeotgali KCTC 22429]
Length = 605
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 72/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG ++R Q + A + +DCFVLLPTGGGKSLCYQ D
Sbjct: 13 FGYSSWRNGQQEIISAVLQGRDCFVLLPTGGGKSLCYQLPALQLPGVTLVVSPLMSLMKD 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L GI A ++NS + VL +LR G
Sbjct: 73 QVDSLRAN-GIAAAYVNSSLSREAVLDVLNQLRYG------------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ SF E RL+ + + F +DEAH
Sbjct: 107 ELKLLYVAPERLL-QPSFLE-----------RLQEVGVSL-------------FAIDEAH 141
Query: 380 CV 381
C+
Sbjct: 142 CI 143
>gi|334348257|ref|XP_001365384.2| PREDICTED: ATP-dependent DNA helicase Q1 [Monodelphis domestica]
Length = 655
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 72/182 (39%), Gaps = 65/182 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F + FRPLQ + ++A ++ F+++PTGGGKSLCYQ
Sbjct: 86 VFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPAVCSDGFTLVICPLISLME 145
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + G+ AT LN+ T V E+ ++ K
Sbjct: 146 DQLMVLE-QLGVSATLLNASSTKEHVKWVHAEM---------------------VNKNSK 183
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YVTPE+I ++ F L+ + G + VDE
Sbjct: 184 --LKLIYVTPEKIAKSKMFMSRLEKAYEAG--------------------RFTRIAVDEV 221
Query: 379 HC 380
HC
Sbjct: 222 HC 223
>gi|440756898|ref|ZP_20936098.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
gi|440172927|gb|ELP52411.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
Length = 701
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 77/196 (39%), Gaps = 68/196 (34%)
Query: 207 LQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------- 257
+ A+D +E FG FRP Q Q +A++ QD V++PTGGGKSLC+
Sbjct: 1 MAAIDSLEKVLKHHFGYDQFRPNQRQIIEAALNDQDLLVIMPTGGGKSLCFQLPALIKKG 60
Query: 258 ------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQ 305
QDQ+ L GI ATFLNS Q R+ L+L
Sbjct: 61 VTVVVSPLIALMQDQVTAL-ADNGIGATFLNSTLNAKQVRD-----RESLIL-------- 106
Query: 306 LIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
+ KLLYV PER++ + SF + L +
Sbjct: 107 ------------QGKIKLLYVAPERLL-SPSFLDFLAVIDNYLG---------------- 137
Query: 366 CQRQLAGFVVDEAHCV 381
LA VDEAHCV
Sbjct: 138 ----LACLAVDEAHCV 149
>gi|425078981|ref|ZP_18482083.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425084628|ref|ZP_18487721.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405589261|gb|EKB62831.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405608866|gb|EKB81789.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
Length = 608
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + ++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS Q+ Q V+ R G V
Sbjct: 81 QVDQL-LANGVAAACLNSTQSREQQQEVMAGCRSGQV----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLY+ PER++ + L H LA VDEAH
Sbjct: 117 --RLLYIAPERLMLDN-------------------------FLEHLANWNLAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|315127615|ref|YP_004069618.1| ATP-dependent DNA helicase [Pseudoalteromonas sp. SM9913]
gi|315016129|gb|ADT69467.1| ATP-dependent DNA helicase [Pseudoalteromonas sp. SM9913]
Length = 607
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 71/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q A++ QD VLLPTGGGKS+CY Q
Sbjct: 22 VFGYSEFRDGQSAVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+ A ++N+ + V Q+L QGL+
Sbjct: 82 DQVTQLQ-ALGVKAAYVNNSLAREEQQLVYQQLHQGLI---------------------- 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PE+++ + F E L L+ ++ F +DEA
Sbjct: 119 ---KLLYVAPEKVL-QRDFLERLSHLN------------------------VSLFAIDEA 150
Query: 379 HCV 381
HCV
Sbjct: 151 HCV 153
>gi|242214076|ref|XP_002472863.1| predicted protein [Postia placenta Mad-698-R]
gi|220728069|gb|EED81971.1| predicted protein [Postia placenta Mad-698-R]
Length = 452
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 77/187 (41%), Gaps = 69/187 (36%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR Q +A A++ +D F+L+PTGGGKSLCYQ
Sbjct: 4 VFGLSGFRTNQLEAITAALDGKDVFLLMPTGGGKSLCYQLPAVCSSGTTKGVTVVISPLR 63
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ +L K + + +S Q+ ++ V LR S
Sbjct: 64 SLMTDQVESLQAK-NVDVVYFSSDQSRDESDEVQHRLR---------------------S 101
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
KPS LLY+TPE+I K S LK TD+ + LA FV
Sbjct: 102 NGQKPS--LLYLTPEKI---------------KHSDALKRDLTDLYE-----SKMLARFV 139
Query: 375 VDEAHCV 381
VDEAHC+
Sbjct: 140 VDEAHCI 146
>gi|212528440|ref|XP_002144377.1| RecQ family helicase RecQ, putative [Talaromyces marneffei ATCC
18224]
gi|210073775|gb|EEA27862.1| RecQ family helicase RecQ, putative [Talaromyces marneffei ATCC
18224]
Length = 540
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 75/191 (39%), Gaps = 66/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++F +FG +FRPLQ + A + D F+ T GKSLC+Q
Sbjct: 11 DIDFTLRRVFGKTSFRPLQREVISAVIDGHDVFLQAATSFGKSLCFQLPAVVSHGVTLVV 70
Query: 259 --------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
DQ+ L +GIP +N +S+ ++++ +LS H
Sbjct: 71 SPLLSLMVDQVAALE-AYGIPVATINGTTPLSERKLIIED-----ILSGH---------- 114
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE ++F LK +H +G +L
Sbjct: 115 --------PKIRLLYVTPE-FCCTETFRRNLKRIHAQG--------------------EL 145
Query: 371 AGFVVDEAHCV 381
+DEAHC+
Sbjct: 146 NRVAIDEAHCI 156
>gi|119188063|ref|XP_001244638.1| hypothetical protein CIMG_04079 [Coccidioides immitis RS]
gi|392871355|gb|EAS33254.2| RecQ family ATP-dependent DNA helicase [Coccidioides immitis RS]
Length = 584
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 75/191 (39%), Gaps = 66/191 (34%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------- 258
D++F +FG +FRPLQ + +A + D F+ T GKSLCYQ
Sbjct: 7 DIDFTLRRVFGKNSFRPLQREVIQAVIEGHDVFLQAATSFGKSLCYQLPAVVCHGITIVV 66
Query: 259 --------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVL 310
DQ+ L GIP +NS S+ A++ + +LS H
Sbjct: 67 SPLLSLMVDQVSALEAN-GIPVATINSTTPHSKRKAIIAD-----ILSGH---------- 110
Query: 311 TCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQL 370
P +LLYVTPE ++F +K +H +G +L
Sbjct: 111 --------PHIRLLYVTPE-YCQTEAFRRHVKQVHSQG--------------------EL 141
Query: 371 AGFVVDEAHCV 381
+DEAHCV
Sbjct: 142 NRIAIDEAHCV 152
>gi|428213965|ref|YP_007087109.1| ATP-dependent DNA helicase RecQ [Oscillatoria acuminata PCC 6304]
gi|428002346|gb|AFY83189.1| ATP-dependent DNA helicase RecQ [Oscillatoria acuminata PCC 6304]
Length = 836
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 80/188 (42%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG+ +FRP Q + +A++ +D +++PTGGGKSLC+Q D
Sbjct: 23 FGHDSFRPGQREIVEAALQNRDLLIVMPTGGGKSLCFQLPALLRKGITVVVSPLIALMQD 82
Query: 260 QIITLNLKFGIPATFLNS----QQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
Q+ +L GI TFLNS +++ S+ A+LQ
Sbjct: 83 QVESLK-NNGIACTFLNSTLSWEESRSRETAILQ-------------------------- 115
Query: 316 KDKPSCKLLYVTPERIVGNQ--SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGF 373
KLLYV PER++ + F ++++ Q ++GF
Sbjct: 116 ---GEIKLLYVAPERLLSERFLPFMDLVRA-----------------------QVGISGF 149
Query: 374 VVDEAHCV 381
+DEAHCV
Sbjct: 150 AIDEAHCV 157
>gi|262040869|ref|ZP_06014095.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041758|gb|EEW42803.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 608
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + ++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS Q+ Q V+ R G V
Sbjct: 81 QVDQL-LANGVAAACLNSTQSREQLQEVMAGCRSGQV----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLY+ PER++ + L H LA VDEAH
Sbjct: 117 --RLLYIAPERLMLDN-------------------------FLEHLANWNLAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|156363725|ref|XP_001626191.1| predicted protein [Nematostella vectensis]
gi|156213059|gb|EDO34091.1| predicted protein [Nematostella vectensis]
Length = 424
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 36/169 (21%)
Query: 220 IFGNRAFRP-LQHQACK-ASVAKQDCFVLLPTGGGKSLCYQDQIIT---LNLKFGIPATF 274
+F R F+ LQ +AC+ S QD FV +PTG GKSLCYQ + + + F
Sbjct: 12 VFKFREFKSELQQRACETVSKGLQDVFVSMPTGSGKSLCYQLPAVVAPGITIVFSPLIAL 71
Query: 275 LNSQQTVSQAAAV-LQELRQGLVLSQH-YFLHQLIFVLTCASRKDKPSCKLLYVTPERIV 332
+ Q T + + ++ L L S+ + L FV KP+ KLLY+TPE +
Sbjct: 72 IQDQVTYLRTLKITVETLNSKLPESERKRVMKDLYFV--------KPTVKLLYITPE-LA 122
Query: 333 GNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F +VL L+++ + L+ F VDEAHCV
Sbjct: 123 ATPGFQKVLDSLYKR--------------------KLLSLFAVDEAHCV 151
>gi|74316914|ref|YP_314654.1| ATP-dependent DNA helicase RecQ [Thiobacillus denitrificans ATCC
25259]
gi|74056409|gb|AAZ96849.1| ATP-dependent DNA helicase RecQ [Thiobacillus denitrificans ATCC
25259]
Length = 598
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 68/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG AFR Q VA D VL+PTGGGKSLCY Q
Sbjct: 12 VFGYPAFRGEQAAIVDTVVAGDDALVLMPTGGGKSLCYQIPALLREGCAVVVSPLIALMQ 71
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + GI A FLNS + AA V ++ G
Sbjct: 72 DQVAALQ-ELGIAAAFLNSSLDGATAARVERDFVSG------------------------ 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PER++ F +L + ++A F +DEA
Sbjct: 107 -QLKLLYVAPERLL-TPRFQSLL------------------------AEARIALFAIDEA 140
Query: 379 HCV 381
HCV
Sbjct: 141 HCV 143
>gi|395330106|gb|EJF62490.1| ATP-dependent RNA helicase [Dichomitus squalens LYAD-421 SS1]
Length = 582
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 71/183 (38%), Gaps = 66/183 (36%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FRP Q A A++ +D FVL PTG GKSL +Q
Sbjct: 73 VFGLPTFRPKQLDAICAAMDGRDVFVLFPTGSGKSLTFQLPAVCQKGVTIVVSPLLSLMR 132
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L K G+ +N S+ V +LR +DK
Sbjct: 133 DQVQALQ-KIGVHCALINGDMKESERTKVKTQLRS----------------------RDK 169
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
P+ LLYVTPE++ + L+ L+ G QL FV+DEA
Sbjct: 170 PN--LLYVTPEQLQMSGYMQSTLQWLYEHG--------------------QLMRFVIDEA 207
Query: 379 HCV 381
HC+
Sbjct: 208 HCI 210
>gi|257058944|ref|YP_003136832.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8802]
gi|256589110|gb|ACU99996.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8802]
Length = 709
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG +FRP Q + + ++ +D V++PTGGGKSLC+ QD
Sbjct: 15 FGYDSFRPGQAKIIQEALQNRDLLVIMPTGGGKSLCFQLPALLKPGLTVVVSPLIALMQD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL L GI ATFLNS + + Q + +G +
Sbjct: 75 QVDTL-LDNGIGATFLNSSLKSEEVRSREQAIIKGKI----------------------- 110
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ N F+ L + K + F +DEAH
Sbjct: 111 --KLLYVAPERLL-NDKFTPFLDFIAEKIGVSF--------------------FAIDEAH 147
Query: 380 CV 381
CV
Sbjct: 148 CV 149
>gi|393247277|gb|EJD54785.1| ATP-dependent DNA helicase [Auricularia delicata TFB-10046 SS5]
Length = 819
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 81/192 (42%), Gaps = 60/192 (31%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIP 271
DM+ +FG + FR Q C A++ ++D ++PTGGGKSL YQ +P
Sbjct: 102 DMKARMQRVFGIQDFRLCQQGVCNANMDRRDIVCIMPTGGGKSLTYQ-----------LP 150
Query: 272 ATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL---IFVLTCASRKDK---------- 318
+ F S V+ L+ Q L + +LT A+RK+
Sbjct: 151 SLF-------SPGCTVVISPLISLITDQILHLREAGVEAVMLTGATRKEDTRSIMNRLIS 203
Query: 319 --PSC-------KLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
PS KL YVTPE++ +++F +L+ L KG +
Sbjct: 204 YDPSAQSGEKEIKLCYVTPEKVAKSKTFVSMLEKLANKG--------------------R 243
Query: 370 LAGFVVDEAHCV 381
LA V+DEAHCV
Sbjct: 244 LARLVIDEAHCV 255
>gi|449550071|gb|EMD41036.1| hypothetical protein CERSUDRAFT_149672 [Ceriporiopsis subvermispora
B]
Length = 645
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 37/150 (24%)
Query: 240 KQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPA------TFLNSQ-QTVSQAAAVLQEL 291
+QD FVL+PTGGGKSLC+Q + L G+ + ++ Q Q + + ++ L
Sbjct: 3 RQDVFVLMPTGGGKSLCFQLPAVCDLGRTRGVTVVVEPLISLIDDQVQALREKNISVESL 62
Query: 292 RQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIR 351
++ + H LH+L C + + +LLYVTPE I N + +L L R
Sbjct: 63 HSEVLENAHGILHRL-----CDTSRQP---RLLYVTPETIRTN-AMKTILGHLDR----- 108
Query: 352 LKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
QR LA FVVDEAHC+
Sbjct: 109 ---------------QRALARFVVDEAHCI 123
>gi|359437026|ref|ZP_09227101.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20311]
gi|358028285|dbj|GAA63350.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20311]
Length = 607
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 70/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR Q A++ QD VLLPTGGGKS+CYQ
Sbjct: 22 VFGYSEFRDGQSAVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+ A ++N+ + V Q+L QGL+
Sbjct: 82 DQVAQLQ-ALGVKAAYINNSLAREERQLVYQQLHQGLI---------------------- 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PE+++ F E L L+ ++ F +DEA
Sbjct: 119 ---KLLYVAPEKVL-QHDFLERLSHLN------------------------VSLFAIDEA 150
Query: 379 HCV 381
HCV
Sbjct: 151 HCV 153
>gi|347761952|ref|YP_004869513.1| DNA helicase [Gluconacetobacter xylinus NBRC 3288]
gi|347580922|dbj|BAK85143.1| DNA helicase [Gluconacetobacter xylinus NBRC 3288]
Length = 611
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 73/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR LQ QA +A +DC VL+PTGGGKS+CYQ
Sbjct: 18 VFGFPDFRGLQQQAVDEVMAGRDCLVLMPTGGGKSVCYQVPALARPGTGLVISPLIALMD 77
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A L+S+ +AA V +L A R D
Sbjct: 78 DQVAALR-QLGVNAGALHSELEADEAARVRSDL--------------------VAGRLD- 115
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+LYV+PER++ L R G + L V+ +DEA
Sbjct: 116 ----ILYVSPERLLSP-------GMLERLGRLTLSVIA------------------IDEA 146
Query: 379 HCV 381
HC+
Sbjct: 147 HCI 149
>gi|307105709|gb|EFN53957.1| hypothetical protein CHLNCDRAFT_25381, partial [Chlorella
variabilis]
Length = 498
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 60/183 (32%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG R+FRPLQ + A++ +D L+P+GGGKSLCY
Sbjct: 103 VFGLRSFRPLQREVINATLQGRDVLCLMPSGGGKSLCYQLPALLSGSGLTLVVSPLLSLI 162
Query: 258 QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD 317
QDQ++ L+ + G+ A L S + +AA++ ++ G +
Sbjct: 163 QDQVLGLS-ELGVQAAALTSLTSKEEAASISKQAGTG-----------------SKAAVS 204
Query: 318 KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDE 377
+LLY TPE++ ++ F L+ +++ G +L VDE
Sbjct: 205 LGGLRLLYCTPEKVASSKRFFTKLEKVYKAG--------------------RLTRIAVDE 244
Query: 378 AHC 380
AHC
Sbjct: 245 AHC 247
>gi|378776821|ref|YP_005185258.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|364507635|gb|AEW51159.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 608
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 67/182 (36%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q + + ++ +D VL+PTGGGKSLCYQ D
Sbjct: 22 FGFDSFRPPQEKIIEDVISGEDVLVLMPTGGGKSLCYQIPAIVRPGVGIVVSPLIALMED 81
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L+ GI A + NS T A VL +L
Sbjct: 82 QVTALKLQ-GIRAAYYNSSLTAEDARNVLNQLHHN------------------------- 115
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
LLY+ PER++ + +C ++ F +DEAH
Sbjct: 116 ELDLLYIAPERLISTSFLDRLSEC-------------------------TISLFAIDEAH 150
Query: 380 CV 381
C+
Sbjct: 151 CI 152
>gi|441500281|ref|ZP_20982448.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
gi|441435974|gb|ELR69351.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
Length = 723
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 71/183 (38%), Gaps = 71/183 (38%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FR Q + + +D VL+PTGGGKSLCYQ D
Sbjct: 17 FGYDSFRHQQKEIIHHILEGRDALVLMPTGGGKSLCYQVPALIFEGVTIVISPLIALMKD 76
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L GI A +LNS + + A V++ LR
Sbjct: 77 QVDALRLN-GISAAYLNSSLSQQEQAEVMRLLRDN------------------------- 110
Query: 320 SCKLLYVTPERIV-GNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLY+ PER+V G++ F LK Q +L+ +DEA
Sbjct: 111 RLKLLYLAPERLVSGDKGFINFLK-----------------------DQAKLSMIAIDEA 147
Query: 379 HCV 381
HC+
Sbjct: 148 HCI 150
>gi|336248080|ref|YP_004591790.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes KCTC 2190]
gi|444353809|ref|YP_007389953.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes EA1509E]
gi|334734136|gb|AEG96511.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes KCTC 2190]
gi|443904639|emb|CCG32413.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes EA1509E]
Length = 608
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 65/181 (35%), Gaps = 70/181 (38%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q ++ +DC V++PTGGGKSLCYQ + L
Sbjct: 21 FGYQQFRPGQESIIATALEGRDCLVVMPTGGGKSLCYQVPALVLGGLTVVVSPLISLMKD 80
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS Q+ Q V+ R G +
Sbjct: 81 QVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQI------------------------ 116
Query: 321 CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
+LLY+ PER++ + L H LA VDEAHC
Sbjct: 117 -RLLYIAPERLMLDN-------------------------FLEHLSHWNLAMLAVDEAHC 150
Query: 381 V 381
+
Sbjct: 151 I 151
>gi|242219722|ref|XP_002475637.1| predicted protein [Postia placenta Mad-698-R]
gi|220725158|gb|EED79158.1| predicted protein [Postia placenta Mad-698-R]
Length = 457
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 77/187 (41%), Gaps = 69/187 (36%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR Q +A A++ +D F+L+PTGGGKSLCYQ
Sbjct: 9 VFGLSGFRTNQLEAITAALDGKDVFLLMPTGGGKSLCYQLPAVCSSGTTKGVTVVISPLR 68
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ +L K + + +S Q+ ++ V LR S
Sbjct: 69 SLMTDQVESLQAK-NVDVVYFSSDQSRDESDEVQHRLR---------------------S 106
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
KPS LLY+TPE+I K S LK TD+ + LA FV
Sbjct: 107 NGQKPS--LLYLTPEKI---------------KHSDALKRDLTDLYE-----SKMLARFV 144
Query: 375 VDEAHCV 381
VDEAHC+
Sbjct: 145 VDEAHCI 151
>gi|295677938|ref|YP_003606462.1| ATP-dependent DNA helicase RecQ [Burkholderia sp. CCGE1002]
gi|295437781|gb|ADG16951.1| ATP-dependent DNA helicase RecQ [Burkholderia sp. CCGE1002]
Length = 615
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 73/187 (39%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVADGGDCLVLMPTGGGKSLCYQIPSLVRRERGFGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + ++A A + LR G
Sbjct: 71 ALMQDQVAALT-EVGVRAAYLNSTLSSAEAMATERALRDG-------------------- 109
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ ++ F E+L+ + ++ F
Sbjct: 110 -----DIDLLYVAPERLMTSR-FQELLE------------------------RTRIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|254443570|ref|ZP_05057046.1| ATP-dependent DNA helicase RecQ [Verrucomicrobiae bacterium DG1235]
gi|198257878|gb|EDY82186.1| ATP-dependent DNA helicase RecQ [Verrucomicrobiae bacterium DG1235]
Length = 616
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 73/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG+ FRPLQ + ++A +D F LLPTGGGKSLCYQ D
Sbjct: 17 FGHDTFRPLQAEIVADALAGRDVFALLPTGGGKSLCYQLPAVLSEGLTVVISPLIALMKD 76
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + GI ATFLNS AA +L G
Sbjct: 77 QVDGLT-ENGIAATFLNSSLGKKDAAQRYAKLFAG------------------------- 110
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
++LYV PER++ F E LK + KV C+ F VDEAH
Sbjct: 111 DYQVLYVAPERLMLG-GFLEDLK--------KWKV-----------CR-----FAVDEAH 145
Query: 380 CV 381
C+
Sbjct: 146 CI 147
>gi|343473260|emb|CCD14808.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 1399
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 70/185 (37%), Gaps = 67/185 (36%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG +R LQ + A + ++D FVLLPTGGGKSLCY
Sbjct: 423 VFGLHQYRFLQLEIMNACMDERDVFVLLPTGGGKSLCYQLPALLPNPAQVTIVISPLISL 482
Query: 258 -QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRK 316
QDQ+ L + GIP+ L Q S + E G +
Sbjct: 483 IQDQVYAL-MANGIPSMALTGQTNDSAKRKLFNEWAMGQI-------------------- 521
Query: 317 DKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
SC L+YVTPE + F + L + +G L FV+D
Sbjct: 522 ---SCALVYVTPEYFGRSDYFVQSLSRVASRG--------------------LLNRFVID 558
Query: 377 EAHCV 381
EAHCV
Sbjct: 559 EAHCV 563
>gi|333394953|ref|ZP_08476772.1| ATP-dependent DNA helicase (RecQ) [Lactobacillus coryniformis
subsp. coryniformis KCTC 3167]
gi|336392884|ref|ZP_08574283.1| ATP-dependent DNA helicase (RecQ) [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 482
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 70/169 (41%), Gaps = 47/169 (27%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG AF+P Q + +A + QD F +LPTG GKSLCYQ +P L Q
Sbjct: 15 FGYTAFKPGQAEVIRAVLGGQDTFAILPTGTGKSLCYQ-----------LPGYLLAGQIV 63
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCA--------SRKDKPSCKLLYVTPERIV 332
+ + L L Q V HY + + LT A S K ++++PE +
Sbjct: 64 I---VSPLLSLMQDQVAQLHYLGEKRVLALTSALDPGMRRYSLAHFEQYKFIFLSPE--M 118
Query: 333 GNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
NQ IR K+ D+ +L VVDEAHC+
Sbjct: 119 ANQE------------QIRRKLQQLDIALL-----------VVDEAHCI 144
>gi|157144447|ref|YP_001451766.1| ATP-dependent DNA helicase RecQ [Citrobacter koseri ATCC BAA-895]
gi|157081652|gb|ABV11330.1| hypothetical protein CKO_00161 [Citrobacter koseri ATCC BAA-895]
Length = 609
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 56/132 (42%), Gaps = 45/132 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q + + V+ +DC V++PTGGGKSLCYQ + LN
Sbjct: 21 FGYQQFRPGQEEIIETVVSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKD 80
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS Q+ Q V+ R G V
Sbjct: 81 QVDQLLANGVAAACLNSTQSREQQHEVMAGCRTGQV------------------------ 116
Query: 321 CKLLYVTPERIV 332
+LLY+ PER++
Sbjct: 117 -RLLYIAPERLM 127
>gi|422015295|ref|ZP_16361894.1| ATP-dependent DNA helicase RecQ [Providencia burhodogranariea DSM
19968]
gi|414099460|gb|EKT61101.1| ATP-dependent DNA helicase RecQ [Providencia burhodogranariea DSM
19968]
Length = 608
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 69/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG ++FRP Q +A + +D VL+PTGGGKSLCYQ D
Sbjct: 21 FGYQSFRPGQEAVIRAILDNRDSLVLMPTGGGKSLCYQVPALVKDGVTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L GI A LNS QT + V+ QG
Sbjct: 81 QVDQLRLH-GINAACLNSSQTPQEQREVMDSCAQG------------------------- 114
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ KLLYV PER++ + S++ +A VDEAH
Sbjct: 115 NLKLLYVAPERLLTDYFLSQL-------------------------ANWNIALLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|420145963|ref|ZP_14653407.1| ATP-dependent DNA helicase (RecQ) [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
gi|398402352|gb|EJN55703.1| ATP-dependent DNA helicase (RecQ) [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
Length = 479
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 70/169 (41%), Gaps = 47/169 (27%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG AF+P Q + +A + QD F +LPTG GKSLCYQ +P L Q
Sbjct: 12 FGYTAFKPGQAEVIRAVLGGQDTFAILPTGTGKSLCYQ-----------LPGYLLAGQIV 60
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCA--------SRKDKPSCKLLYVTPERIV 332
+ + L L Q V HY + + LT A S K ++++PE +
Sbjct: 61 I---VSPLLSLMQDQVAQLHYLGEKRVLALTSALDPGMRRYSLAHFEQYKFIFLSPE--M 115
Query: 333 GNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
NQ IR K+ D+ +L VVDEAHC+
Sbjct: 116 ANQE------------QIRRKLQQLDIALL-----------VVDEAHCI 141
>gi|374375144|ref|ZP_09632802.1| ATP-dependent DNA helicase, RecQ family [Niabella soli DSM 19437]
gi|373231984|gb|EHP51779.1| ATP-dependent DNA helicase, RecQ family [Niabella soli DSM 19437]
Length = 638
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 75/172 (43%), Gaps = 52/172 (30%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQ-Q 279
FG FRPLQ +A++ +D L+PTGGGKSLCYQ +P F
Sbjct: 13 FGFDQFRPLQLDIIRAAMEGKDVLALMPTGGGKSLCYQ-----------VPGLFKEGLCL 61
Query: 280 TVSQAAAVL----QELRQGLVLSQHYFLH------QLIFVLTCASRKDKPSCKLLYVTPE 329
+S A++ Q LR+ + + + +H +++ VL A+ + CK LYV+PE
Sbjct: 62 VISPLIALMNDQVQNLRKKNITA--FAIHTGMARKEVVNVLKTAAHSN---CKFLYVSPE 116
Query: 330 RIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
R+ N F E L L Q+ VDEAHC+
Sbjct: 117 RLETN-LFKEYLPAL------------------------QVNFIAVDEAHCI 143
>gi|349702223|ref|ZP_08903852.1| ATP-dependent DNA helicase RecQ [Gluconacetobacter europaeus LMG
18494]
Length = 611
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 72/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR LQ QA +A +DC VL+PTGGGKS+CYQ
Sbjct: 18 VFGFPDFRGLQQQAVDEVMAGRDCLVLMPTGGGKSVCYQVPALARPGTGLVISPLIALMD 77
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A L+S+Q A V +L A R D
Sbjct: 78 DQVAALR-QLGVNAGALHSEQEADDGARVRSDL--------------------MAGRLD- 115
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+LYV+PER++ L R G + L ++ +DEA
Sbjct: 116 ----ILYVSPERLLSP-------GMLERLGRLTLSIIA------------------IDEA 146
Query: 379 HCV 381
HC+
Sbjct: 147 HCI 149
>gi|427789035|gb|JAA59969.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 640
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 26/147 (17%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQ 279
+F +FR +Q A +++ +DC +++PTGGGKSLCYQ +PA +
Sbjct: 76 VFHMTSFRSMQLPAINVTLSNKDCILIMPTGGGKSLCYQ-----------LPALI---SK 121
Query: 280 TVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD-----------KPSCKLLYVTP 328
V+ + L L + V++ + + + S KD + S KLLYVTP
Sbjct: 122 GVTVVVSPLLSLMEDQVMALQAMSYPVAMLAANVSVKDTNQILKAMADGEDSLKLLYVTP 181
Query: 329 ERIVGNQSFSEVL-KCLHRKGSIRLKV 354
E++ ++ F +L K RK RL +
Sbjct: 182 EKMAKSKRFMSMLEKAYQRKHFARLAI 208
>gi|384171248|ref|YP_005552625.1| ATP-dependent DNA helicase RecQ [Arcobacter sp. L]
gi|345470858|dbj|BAK72308.1| ATP-dependent DNA helicase RecQ [Arcobacter sp. L]
Length = 706
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 68/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
IFG+ FR Q + + KQD +LPTGGGKSLCY Q
Sbjct: 16 IFGHEHFRSFQEEVVDCILNKQDVLTILPTGGGKSLCYQLPTLLMNGTTVVISPLIALMQ 75
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQI LN I A ++S + + + LQ+L G
Sbjct: 76 DQIKALN-DLNISAEMISSATSNDENSFTLQKLLNG------------------------ 110
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
K +YV PER N+ F VL+ ++ + FV+DEA
Sbjct: 111 -ELKFIYVAPERFTSNE-FVSVLQRIN------------------------INYFVIDEA 144
Query: 379 HCV 381
HCV
Sbjct: 145 HCV 147
>gi|301631087|ref|XP_002944639.1| PREDICTED: ATP-dependent DNA helicase recQ-like, partial [Xenopus
(Silurana) tropicalis]
Length = 954
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 69/187 (36%), Gaps = 72/187 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR Q + +A D VL+PTGGGKSLCYQ
Sbjct: 55 VFGYAQFRGPQEAIVEHVIAGSDALVLMPTGGGKSLCYQVPAIVRRDVGQGITVVVSPLI 114
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L+ + G+ A FLNS Q V + L G +
Sbjct: 115 ALMHDQVGALH-EAGVEAAFLNSTLDWQQTLDVERRLSHGEI------------------ 155
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLY PER+ + F +L LH +G QL+ F
Sbjct: 156 -------TLLYAAPERVT-TERFLGLLDRLHERG--------------------QLSLFA 187
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 188 IDEAHCV 194
>gi|268592895|ref|ZP_06127116.1| ATP-dependent DNA helicase RecQ [Providencia rettgeri DSM 1131]
gi|291311686|gb|EFE52139.1| ATP-dependent DNA helicase RecQ [Providencia rettgeri DSM 1131]
Length = 608
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 71/187 (37%), Gaps = 82/187 (43%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG ++FRP Q A + +DC VL+PTGGGKSLCYQ D
Sbjct: 21 FGYQSFRPGQDAVIGAILDNRDCLVLMPTGGGKSLCYQVPALVKEGVTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS QT + +++ QG +
Sbjct: 81 QVDQLRLH-GVNAACLNSSQTSQEQRQIMELCSQGEI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGF-----V 374
KLLYV PER++ + S QLAG+
Sbjct: 117 --KLLYVAPERLLTDYFLS------------------------------QLAGWNITLLA 144
Query: 375 VDEAHCV 381
VDEAHC+
Sbjct: 145 VDEAHCI 151
>gi|121603031|ref|YP_980360.1| ATP-dependent DNA helicase RecQ [Polaromonas naphthalenivorans CJ2]
gi|120592000|gb|ABM35439.1| ATP-dependent DNA helicase RecQ [Polaromonas naphthalenivorans CJ2]
Length = 639
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 70/187 (37%), Gaps = 72/187 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR Q + +A D VL+PTGGGKSLCYQ
Sbjct: 28 VFGYSDFRGPQQAIVEHVIAGGDALVLMPTGGGKSLCYQIPAIARQNAGHGVTIVISPLI 87
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L L+ G+ A FLNS QT +++ + ++L +
Sbjct: 88 ALMHDQVGAL-LEAGVSAAFLNSTQTFEESSQLEKQLLRN-------------------- 126
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLY PERI +L LH +G + L F
Sbjct: 127 -----ELTLLYAAPERI-NTPRMKGLLASLHERGLLSL--------------------FA 160
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 161 IDEAHCV 167
>gi|403369477|gb|EJY84584.1| hypothetical protein OXYTRI_17569 [Oxytricha trifallax]
Length = 1341
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 76/190 (40%), Gaps = 61/190 (32%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-----DQIITL-- 264
+++ AN IFGN FR Q + A+ + +D L+PTGGGKSL +Q D+ +TL
Sbjct: 254 EVDIANQAIFGNEIFRENQREIINATKSHKDVLALIPTGGGKSLTFQLSAVTDEGVTLVI 313
Query: 265 ---------NLKF----GIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLT 311
N F GIPA L+S + +E R V
Sbjct: 314 MPLLSLIEDNFSFVEDLGIPACNLSSPNQSQK-----EERR----------------VYQ 352
Query: 312 CASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLA 371
C + KL+Y+TPE++V + + L+ G I
Sbjct: 353 CYNDIKNVVYKLVYLTPEKLVKSPGLMSAMDHLYAIGKIDR------------------- 393
Query: 372 GFVVDEAHCV 381
FV+DE HCV
Sbjct: 394 -FVIDEVHCV 402
>gi|375129367|ref|YP_004991462.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii NCTC 11218]
gi|315178536|gb|ADT85450.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii NCTC 11218]
Length = 611
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 79/203 (38%), Gaps = 72/203 (35%)
Query: 200 GTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ- 258
TL E+ AL D + +FG + FR Q + +++VA +D V++PTGGGKSLCYQ
Sbjct: 3 ATLIAEQSDALPDPQTILRDVFGYQTFRDGQQEVIESAVAGRDALVIMPTGGGKSLCYQI 62
Query: 259 --------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLS 298
DQ+ L G+ A +NS Q+ + + G
Sbjct: 63 PALAREGVTVVISPLISLMKDQVDQLKAN-GVAAECVNSTQSREALMGIYNRMHSG---- 117
Query: 299 QHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTD 358
KLLYV+PER++ E ++ LH
Sbjct: 118 ---------------------QLKLLYVSPERVLTG----EFIERLHN------------ 140
Query: 359 VVVLPHTCQRQLAGFVVDEAHCV 381
LP LA VDEAHC+
Sbjct: 141 ---LP------LAMIAVDEAHCI 154
>gi|375258339|ref|YP_005017509.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca KCTC 1686]
gi|402839822|ref|ZP_10888300.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. OBRC7]
gi|423105828|ref|ZP_17093529.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5242]
gi|365907817|gb|AEX03270.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca KCTC 1686]
gi|376379689|gb|EHS92440.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5242]
gi|402287439|gb|EJU35887.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. OBRC7]
Length = 608
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 66/181 (36%), Gaps = 70/181 (38%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q ++A +DC V++PTGGGKSLCYQ + L
Sbjct: 21 FGYQQFRPGQETIIDTALAGRDCLVVMPTGGGKSLCYQVPALVLGGLTVVVSPLISLMKD 80
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS Q+ Q V+ R G +
Sbjct: 81 QVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQI------------------------ 116
Query: 321 CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
+LLY+ PER++ + L H L+ VDEAHC
Sbjct: 117 -RLLYIAPERLMLDN-------------------------FLEHLTHWNLSMVAVDEAHC 150
Query: 381 V 381
+
Sbjct: 151 I 151
>gi|333925046|ref|YP_004498625.1| ATP-dependent DNA helicase RecQ [Serratia sp. AS12]
gi|333929999|ref|YP_004503577.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica AS9]
gi|386326870|ref|YP_006023040.1| ATP-dependent DNA helicase RecQ [Serratia sp. AS13]
gi|333471606|gb|AEF43316.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica AS9]
gi|333489106|gb|AEF48268.1| ATP-dependent DNA helicase RecQ [Serratia sp. AS12]
gi|333959203|gb|AEG25976.1| ATP-dependent DNA helicase RecQ [Serratia sp. AS13]
Length = 618
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 61/142 (42%), Gaps = 48/142 (33%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A++ DC V++PTGGGKSLCYQ D
Sbjct: 29 FGYQQFRPGQQTIINAAIGGLDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 88
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A NS QT Q V+ R G +
Sbjct: 89 QVDQL-LAYGVSAACYNSTQTREQQLEVMAGCRSGQI----------------------- 124
Query: 320 SCKLLYVTPERIVGNQSFSEVL 341
K+LY+ PER++ + SF ++L
Sbjct: 125 --KMLYIAPERLMMD-SFLDLL 143
>gi|260770707|ref|ZP_05879637.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii CIP 102972]
gi|260614288|gb|EEX39477.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii CIP 102972]
Length = 611
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 79/203 (38%), Gaps = 72/203 (35%)
Query: 200 GTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ- 258
TL E+ AL D + +FG + FR Q + +++VA +D V++PTGGGKSLCYQ
Sbjct: 3 ATLIAEQSDALPDPQTILRDVFGYQTFRDGQQEVIESAVAGRDALVIMPTGGGKSLCYQI 62
Query: 259 --------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLS 298
DQ+ L G+ A +NS Q+ + + G
Sbjct: 63 PALAREGVTVVISPLISLMKDQVDQLKAN-GVAAECVNSTQSREALMGIYNRMHSG---- 117
Query: 299 QHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTD 358
KLLYV+PER++ E ++ LH
Sbjct: 118 ---------------------QLKLLYVSPERVLTG----EFIERLHN------------ 140
Query: 359 VVVLPHTCQRQLAGFVVDEAHCV 381
LP LA VDEAHC+
Sbjct: 141 ---LP------LAMIAVDEAHCI 154
>gi|443725010|gb|ELU12752.1| hypothetical protein CAPTEDRAFT_102278, partial [Capitella teleta]
Length = 622
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 74/185 (40%), Gaps = 68/185 (36%)
Query: 220 IFGNRAFRP-LQHQACKASV-AKQDCFVLLPTGGGKSLCY-------------------- 257
+FG+ FR LQ A +A+V D FV +PTG GKSLCY
Sbjct: 16 VFGHDEFRSDLQRNAVEAAVRGGVDIFVSMPTGAGKSLCYQLPAVAKRGITFVISPLIAL 75
Query: 258 -QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRK 316
QDQ+ L IPA LNS+ + + AV+ +L +
Sbjct: 76 MQDQLEHLQA-LNIPANTLNSKMSAEERKAVMYDL-----------------------NR 111
Query: 317 DKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
++P KLLY+TPE+ F + + L +K + FVVD
Sbjct: 112 ERPHTKLLYITPEQ-AATSGFISITEMLMKKKLVEF--------------------FVVD 150
Query: 377 EAHCV 381
EAHCV
Sbjct: 151 EAHCV 155
>gi|37528437|ref|NP_931782.1| ATP-dependent DNA helicase RecQ [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787875|emb|CAE16992.1| ATP-dependent DNA helicase RecQ [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 608
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q Q + +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYLQFRSGQQQVIDTILEGRDCLVIMPTGGGKSLCYQIPALVQEGVTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L G+ A LNS Q Q V++ RQG++
Sbjct: 81 QVDQLRAN-GVAADCLNSTQAREQQIDVIRRCRQGMI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER++ + ++L+ Q A VDEAH
Sbjct: 117 --KLLYIAPERLMMDNFLEQLLEW-------------------------QPAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|399018929|ref|ZP_10721080.1| ATP-dependent DNA helicase RecQ [Herbaspirillum sp. CF444]
gi|398098859|gb|EJL89138.1| ATP-dependent DNA helicase RecQ [Herbaspirillum sp. CF444]
Length = 614
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 70/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG +FR Q + V D VL+PTGGGKSLCY Q
Sbjct: 23 VFGYSSFRGQQGDIVRHVVQGGDALVLMPTGGGKSLCYQIPALVRDGVGVVVSPLIALMQ 82
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A FLNS QT +A + + +R G
Sbjct: 83 DQVDALA-EVGVRAAFLNSTQTFDEAMQIERRVRSG------------------------ 117
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+LYV PER++ + E+L+ H +A F +DEA
Sbjct: 118 -DLDVLYVAPERLMTPRCL-ELLEAAH------------------------IALFAIDEA 151
Query: 379 HCV 381
HCV
Sbjct: 152 HCV 154
>gi|333029863|ref|ZP_08457924.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
gi|332740460|gb|EGJ70942.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
Length = 605
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRPLQ + + + K+D VL+PTGGGKS+CYQ D
Sbjct: 14 FGYEGFRPLQREIIENILDKKDTLVLMPTGGGKSICYQLPALLLKGITIVISPLISLMKD 73
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L GI A LNS + ++ + Q RQG +
Sbjct: 74 QVEAL-LANGINAGALNSNNSDTENELIKQNCRQGKI----------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + L D+ ++ F VDEAH
Sbjct: 110 --KLLYISPEKLLSEIDY-----------------LLKDI---------DISLFAVDEAH 141
Query: 380 CV 381
C+
Sbjct: 142 CI 143
>gi|170078505|ref|YP_001735143.1| ATP-dependent DNA helicase [Synechococcus sp. PCC 7002]
gi|169886174|gb|ACA99887.1| ATP-dependent DNA helicase [Synechococcus sp. PCC 7002]
Length = 712
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 76/190 (40%), Gaps = 68/190 (35%)
Query: 213 MEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------------- 257
+E A FG FR Q A++ +D L+PTG GKSLC+
Sbjct: 7 LEAALKHFFGYDNFRHGQKAVITAALENRDILALMPTGAGKSLCFQLPALLKPGLTVVIS 66
Query: 258 ------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLT 311
QDQ+ L GI ATFLNS + QA + +Q + G
Sbjct: 67 PLIALMQDQVDALT-DNGIGATFLNSTLNLDQARSRIQAIFNG----------------- 108
Query: 312 CASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLA 371
+ KLLYV PER+ N+ F ++L TDV T L
Sbjct: 109 --------NIKLLYVAPERLF-NEGFQQLL---------------TDV---DQTI--GLT 139
Query: 372 GFVVDEAHCV 381
GFVVDEAHCV
Sbjct: 140 GFVVDEAHCV 149
>gi|88603641|ref|YP_503819.1| ATP-dependent DNA helicase RecQ [Methanospirillum hungatei JF-1]
gi|88189103|gb|ABD42100.1| ATP-dependent DNA helicase RecQ [Methanospirillum hungatei JF-1]
Length = 606
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 73/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG R +RP Q + + +D ++ TGGGKSLCYQ D
Sbjct: 16 FGYRTYRPGQKEIITHVLEGRDVLAVIATGGGKSLCYQIPALIRDGVGIVISPLIALMKD 75
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + GIPA FLNS Q V ++ +G +L
Sbjct: 76 QVDCLA-ESGIPAAFLNSTQDVKDKRSI-----EGSILDG-------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
S KLLY++PER+V SF E LK S R+ + F +DEAH
Sbjct: 110 SLKLLYISPERLV-QPSFIEFLK------STRISL------------------FAIDEAH 144
Query: 380 CV 381
C+
Sbjct: 145 CI 146
>gi|317968877|ref|ZP_07970267.1| putative ATP-dependent DNA helicase [Synechococcus sp. CB0205]
Length = 494
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG AFRP Q +A ++ QDC +LPTG GKSLCYQ D
Sbjct: 13 FGWSAFRPGQRPVIEAMLSGQDCLAVLPTGAGKSLCYQLPALVREGLVLVISPLVALMED 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + GIPA L+ + +LQ +R +
Sbjct: 73 QVQHLQ-RRGIPAACLHRGLDPMRRRDLLQRVRSNRL----------------------- 108
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLY+ PER+ ++ +L+ +H +G +L G +DEAH
Sbjct: 109 --RLLYLAPERL-QVEATRRLLEEIHEEG--------------------KLVGLAIDEAH 145
Query: 380 CV 381
C+
Sbjct: 146 CI 147
>gi|423111286|ref|ZP_17098981.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5243]
gi|423117298|ref|ZP_17104989.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5245]
gi|376376415|gb|EHS89194.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5245]
gi|376377058|gb|EHS89832.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5243]
Length = 608
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 66/181 (36%), Gaps = 70/181 (38%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q ++A +DC V++PTGGGKSLCYQ + L
Sbjct: 21 FGYQQFRPGQETIIDTALAGRDCLVVMPTGGGKSLCYQVPALVLGGLTVVVSPLISLMKD 80
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS Q+ Q V+ R G +
Sbjct: 81 QVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQI------------------------ 116
Query: 321 CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
+LLY+ PER++ + L H L+ VDEAHC
Sbjct: 117 -RLLYIAPERLMLDN-------------------------FLEHLTHWNLSMVAVDEAHC 150
Query: 381 V 381
+
Sbjct: 151 I 151
>gi|367471056|ref|ZP_09470715.1| ATP-dependent DNA helicase RecQ [Patulibacter sp. I11]
gi|365813867|gb|EHN09106.1| ATP-dependent DNA helicase RecQ [Patulibacter sp. I11]
Length = 625
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 75/184 (40%), Gaps = 57/184 (30%)
Query: 219 VIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-------------------- 258
V FG+ AFRP Q A +A+ +D V++PTG GKSL YQ
Sbjct: 13 VAFGHPAFRPGQEDAARAAYGGRDALVVMPTGAGKSLTYQLPALCRDDLTLVVSPLVSLM 72
Query: 259 -DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKD 317
DQ+ LN + P+ + ++ A + LS + + +L A D
Sbjct: 73 RDQVEQLNARVAGPSAHTAAGAAQARPPAAM--------LSGQQDPAENLAILDRAVAGD 124
Query: 318 KPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDE 377
+LLYV PER G+ +F E + R+ + L FVVDE
Sbjct: 125 ---LRLLYVAPERF-GSAAFLERI----RRARVGL--------------------FVVDE 156
Query: 378 AHCV 381
AHCV
Sbjct: 157 AHCV 160
>gi|320581820|gb|EFW96039.1| ATP-dependent helicase [Ogataea parapolymorpha DL-1]
Length = 1277
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 35/164 (21%)
Query: 225 AFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQTVSQA 284
+FR Q +A A+++ +D FVL+PTGGGKSLCYQ + +K GI + + +S
Sbjct: 526 SFRENQLEAINATLSGEDVFVLMPTGGGKSLCYQ---LPALVKSGITS---GTTIVISPL 579
Query: 285 AAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP-------SCKLLYVTPERIVGNQSF 337
+++Q+ L+ Q+ +I + AS++ + L+Y++PE I +
Sbjct: 580 ISLMQDQVHHLL--QNQIKAAMINSKSSASQRKQTFDLFVNGFLDLVYLSPEMISASGMV 637
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ LH+K + LA VVDEAHCV
Sbjct: 638 RNAIATLHKK--------------------KMLARVVVDEAHCV 661
>gi|359299526|ref|ZP_09185365.1| ATP-dependent DNA helicase RecQ [Haemophilus [parainfluenzae] CCUG
13788]
gi|402304439|ref|ZP_10823509.1| ATP-dependent DNA helicase RecQ [Haemophilus sputorum HK 2154]
gi|400378027|gb|EJP30892.1| ATP-dependent DNA helicase RecQ [Haemophilus sputorum HK 2154]
Length = 601
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 71/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG + FR Q + A +A +DC V++ TGGGKSLCYQ
Sbjct: 14 VFGYQQFRQGQQEVIDAVLAGRDCLVIMTTGGGKSLCYQVPALCLEGITLVISPLISLMK 73
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L L GI A +LNS QT + AV Q+ G
Sbjct: 74 DQVDQL-LTNGIEAAYLNSTQTQEEQQAVEQKALSG------------------------ 108
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLY++PE+++ F V C +++ VDEA
Sbjct: 109 -QLKLLYLSPEKVMTQGFFRLVSYC-------------------------KVSFIAVDEA 142
Query: 379 HCV 381
HCV
Sbjct: 143 HCV 145
>gi|241829138|ref|XP_002414740.1| DNA helicase recq1, putative [Ixodes scapularis]
gi|215508952|gb|EEC18405.1| DNA helicase recq1, putative [Ixodes scapularis]
Length = 619
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 27/163 (16%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-PATFLNS 277
+F + RP Q A +++ DC V++PTGGGKSLC+Q +++ L + P L
Sbjct: 76 VFKMKGLRPTQLPAINVTMSNHDCIVIMPTGGGKSLCFQLPALLSPGLTVVVSPLVSLME 135
Query: 278 QQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSF 337
Q ++ L+ L + + + +T A K KL+YVTPE++ ++ F
Sbjct: 136 DQVMA-----LERLSYPVAMLSATTPQKKTSAITNAMDDKKSPIKLIYVTPEKMAKSKRF 190
Query: 338 SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
L+ ++KG C +LA +DE HC
Sbjct: 191 MAKLEKAYQKG-----------------CFSRLA---IDEVHC 213
>gi|149178212|ref|ZP_01856806.1| ATP-dependent DNA helicase RecQ [Planctomyces maris DSM 8797]
gi|148842994|gb|EDL57363.1| ATP-dependent DNA helicase RecQ [Planctomyces maris DSM 8797]
Length = 611
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 72/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
+G FRPLQ +A A + +D V+LPTGGGKSLCYQ D
Sbjct: 18 WGYAEFRPLQQEAMTAVLDDRDSLVVLPTGGGKSLCYQAPALCREGTAVVVSPLISLMKD 77
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + GI A LNS ++ VL+++R G +
Sbjct: 78 QVDALRV-CGISAACLNSSLDQEESRQVLRDVRAGKI----------------------- 113
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ E + CL + L V+DEAH
Sbjct: 114 --KLLYVAPERLM-----LENMLCL--------------------LAEINLTYIVIDEAH 146
Query: 380 CV 381
CV
Sbjct: 147 CV 148
>gi|386823577|ref|ZP_10110722.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica PRI-2C]
gi|386379516|gb|EIJ20308.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica PRI-2C]
Length = 610
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 61/142 (42%), Gaps = 48/142 (33%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A++ DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQTIINAAIGGLDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A NS QT Q V+ R G +
Sbjct: 81 QVDQL-LAYGVSAACYNSTQTREQQLEVMAGCRSGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVL 341
K+LY+ PER++ + SF ++L
Sbjct: 117 --KMLYIAPERLMMD-SFLDLL 135
>gi|421781133|ref|ZP_16217606.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica A30]
gi|407756805|gb|EKF66915.1| ATP-dependent DNA helicase RecQ [Serratia plymuthica A30]
Length = 610
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 61/142 (42%), Gaps = 48/142 (33%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A++ DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQTIINAAIGGLDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A NS QT Q V+ R G +
Sbjct: 81 QVDQL-LAYGVSAACYNSTQTREQQLEVMAGCRSGQI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVL 341
K+LY+ PER++ + SF ++L
Sbjct: 117 --KMLYIAPERLMMD-SFLDLL 135
>gi|270264266|ref|ZP_06192533.1| ATP-dependent DNA helicase RecQ [Serratia odorifera 4Rx13]
gi|270041915|gb|EFA15012.1| ATP-dependent DNA helicase RecQ [Serratia odorifera 4Rx13]
Length = 612
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 61/142 (42%), Gaps = 48/142 (33%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A++ DC V++PTGGGKSLCYQ D
Sbjct: 23 FGYQQFRPGQQTIINAAIGGLDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 82
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L +G+ A NS QT Q V+ R G +
Sbjct: 83 QVDQL-LAYGVSAACYNSTQTREQQLEVMAGCRSGQI----------------------- 118
Query: 320 SCKLLYVTPERIVGNQSFSEVL 341
K+LY+ PER++ + SF ++L
Sbjct: 119 --KMLYIAPERLMMD-SFLDLL 137
>gi|78187521|ref|YP_375564.1| ATP-requiring DNA helicase RecQ [Chlorobium luteolum DSM 273]
gi|78167423|gb|ABB24521.1| ATP-dependent DNA helicase RecQ [Chlorobium luteolum DSM 273]
Length = 615
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 71/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG +AFRP Q + +A + +D F ++PTGGGKSLCYQ
Sbjct: 17 VFGFQAFRPNQREVVRAILEGRDVFAVMPTGGGKSLCYQLPAVLLPGTCIVVSPLIALMK 76
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ GI A FLNS Q + V L+ G
Sbjct: 77 DQVDGARAN-GIRAAFLNSSQLPEERQMVANALQSG------------------------ 111
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+LLYV PER + SF +L+ IR+ + V+DEA
Sbjct: 112 -ELELLYVAPERFAVD-SFRAMLR------GIRISMA------------------VIDEA 145
Query: 379 HCV 381
HC+
Sbjct: 146 HCI 148
>gi|386389497|ref|ZP_10074311.1| ATP-dependent DNA helicase RecQ [Haemophilus paraphrohaemolyticus
HK411]
gi|385695267|gb|EIG25829.1| ATP-dependent DNA helicase RecQ [Haemophilus paraphrohaemolyticus
HK411]
Length = 601
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 74/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG + FR Q + ++++A +D FV++ TGGGKSLCYQ
Sbjct: 14 VFGYQQFRQGQQEVIESTLAGKDTFVIMTTGGGKSLCYQVPALCLEGITLVISPLISLMK 73
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L L GI A +LNS QT+ + AV Q+ G
Sbjct: 74 DQVDQL-LTNGIEAAYLNSTQTLEEQRAVEQKALNG------------------------ 108
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLY++PE+++ + + C +++ VDEA
Sbjct: 109 -QLKLLYLSPEKVMTQGFYHFISHC-------------------------KISFIAVDEA 142
Query: 379 HCV 381
HCV
Sbjct: 143 HCV 145
>gi|297570067|ref|YP_003691411.1| ATP-dependent DNA helicase RecQ [Desulfurivibrio alkaliphilus AHT2]
gi|296925982|gb|ADH86792.1| ATP-dependent DNA helicase RecQ [Desulfurivibrio alkaliphilus AHT2]
Length = 609
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 69/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG +FRP Q + + +A +D FVL+PTGGGKSLCYQ
Sbjct: 12 VFGFASFRPQQREIIEDLLAGRDAFVLMPTGGGKSLCYQLPALHRPGVAIVVSPLISLMK 71
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + GI A NS +A VL L G
Sbjct: 72 DQVDALKAQ-GIKAACYNSALEAQEARQVLARLHGG------------------------ 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER++ RL+ L Q+A F +DEA
Sbjct: 107 -ELDLLYVAPERLMSEDFLG------------RLREL-------------QIALFAIDEA 140
Query: 379 HCV 381
HCV
Sbjct: 141 HCV 143
>gi|254430893|ref|ZP_05044596.1| ATP-dependent DNA helicase [Cyanobium sp. PCC 7001]
gi|197625346|gb|EDY37905.1| ATP-dependent DNA helicase [Cyanobium sp. PCC 7001]
Length = 534
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 77/182 (42%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG AFRP Q +A +A QDC +LPTGGGKSLC+ QD
Sbjct: 45 FGWSAFRPGQRPVVEALLAGQDCLAVLPTGGGKSLCFQLPALVRQGLVLVVSPLVALMQD 104
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L + GIPA L+ +GL S+ LH + +D
Sbjct: 105 QVMQLQ-RRGIPAACLH----------------RGLGASERKSLHGAL--------RDG- 138
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLY+ PER+ ++ ++L+ +VL T +L VDEAH
Sbjct: 139 RLRLLYLAPERL-QVEATRQLLE----------EVLDTG----------RLVALAVDEAH 177
Query: 380 CV 381
C+
Sbjct: 178 CI 179
>gi|428184941|gb|EKX53795.1| hypothetical protein GUITHDRAFT_52059, partial [Guillardia theta
CCMP2712]
Length = 340
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 72/182 (39%), Gaps = 65/182 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG FRPLQ +A + +D V L TGGGKSLCY QD
Sbjct: 5 FGLSDFRPLQKEAIHNVLGGKDVIVCLATGGGKSLCYQLPALVLPGVTVVISPLIALMQD 64
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L K GI A LNS + ++ +L L + K P
Sbjct: 65 QVFSLREK-GIDAVLLNSTLSPTETRNILHRL---------------------WAIKHSP 102
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYVTPE + G S + L+R Q +L+ F +DEAH
Sbjct: 103 -IKLLYVTPEALSG----STLFPYLNRLNE-----------------QNKLSLFAIDEAH 140
Query: 380 CV 381
C+
Sbjct: 141 CI 142
>gi|327291741|ref|XP_003230579.1| PREDICTED: ATP-dependent DNA helicase Q1-like, partial [Anolis
carolinensis]
Length = 451
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 65/176 (36%)
Query: 226 FRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------DQIITL 264
FRPLQ + ++A +D F+++PTGGGKSLCYQ DQ++ L
Sbjct: 92 FRPLQLETINVTMAGRDVFLVMPTGGGKSLCYQLPAVCSDGFTLVICPLVSLMEDQLMVL 151
Query: 265 NLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLL 324
+ + AT LN+ + V E+ L+ +S+ KL+
Sbjct: 152 E-QLKVSATLLNASSSKEHVKWVYTEM------------------LSSSSQ-----LKLI 187
Query: 325 YVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
YVTPE+I ++ F L+ ++ G +L VDE HC
Sbjct: 188 YVTPEKIAKSKMFVSKLEKAYQAG--------------------RLTHIAVDEVHC 223
>gi|383815908|ref|ZP_09971314.1| ATP-dependent DNA helicase RecQ [Serratia sp. M24T3]
gi|383295198|gb|EIC83526.1| ATP-dependent DNA helicase RecQ [Serratia sp. M24T3]
Length = 610
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 69/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q A++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQTIINAAILGKDCLVVMPTGGGKSLCYQIPALVMDGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + G+ A LNS QT Q V+ R G +
Sbjct: 81 QVDQL-MAAGVEAGCLNSTQTREQQQEVMAGCRSGRI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K+LY+ PER+ + + L+ L Q A VDEAH
Sbjct: 117 --KMLYIAPERL----TMGDFLEQLQ---------------------QWNPAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|85858064|ref|YP_460266.1| superfamily II DNA helicase [Syntrophus aciditrophicus SB]
gi|85721155|gb|ABC76098.1| superfamily II DNA helicase [Syntrophus aciditrophicus SB]
Length = 619
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 72/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
IFG AFR Q + + +D FVL+PTGGGKSLCYQ
Sbjct: 12 IFGYDAFRLHQQEIVDGLIRGEDAFVLMPTGGGKSLCYQLPALHRPGVGIVVSPLISLMK 71
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ +L +G+ A F NS + ++A VL L G
Sbjct: 72 DQVDSLK-AYGVKAAFYNSSLSGTEARKVLARLHGG------------------------ 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
L+Y+ PER++ ++ F E L D+ + A F +DEA
Sbjct: 107 -KLDLIYIAPERLM-SREFLERL---------------NDIPI---------ALFAIDEA 140
Query: 379 HCV 381
HC+
Sbjct: 141 HCI 143
>gi|73542870|ref|YP_297390.1| ATP-dependent DNA helicase RecQ [Ralstonia eutropha JMP134]
gi|72120283|gb|AAZ62546.1| ATP-dependent DNA helicase RecQ [Ralstonia eutropha JMP134]
Length = 615
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYHAFRGRQGEIIDHVATGGDCLVLMPTGGGKSLCYQIPALLRQRAGEGVGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A+ LNS T S+A+AV ++L G +
Sbjct: 71 ALMQDQVAALT-EAGVRASVLNSTLTSSEASAVERDLLAGRL------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
++LYV PER++ F ++L G R+ + F
Sbjct: 112 -------EILYVAPERLM-TPRFLDLL------GRARVGL------------------FA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|423123017|ref|ZP_17110701.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5246]
gi|376391770|gb|EHT04440.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5246]
Length = 608
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 65/181 (35%), Gaps = 70/181 (38%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q ++ +DC V++PTGGGKSLCYQ + L
Sbjct: 21 FGYQQFRPGQETIIDTALGGRDCLVVMPTGGGKSLCYQVPALVLGGLTVVVSPLISLMKD 80
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS Q+ Q V+ R G +
Sbjct: 81 QVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQI------------------------ 116
Query: 321 CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
+LLY+ PER++ + L H LA VDEAHC
Sbjct: 117 -RLLYIAPERLMLDN-------------------------FLEHLSHWNLAMVAVDEAHC 150
Query: 381 V 381
+
Sbjct: 151 I 151
>gi|326404494|ref|YP_004284576.1| ATP-dependent DNA helicase RecQ [Acidiphilium multivorum AIU301]
gi|325051356|dbj|BAJ81694.1| ATP-dependent DNA helicase RecQ [Acidiphilium multivorum AIU301]
Length = 610
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 70/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG+ FR Q +A D VL+PTGGGKS+CYQ
Sbjct: 24 VFGHDGFRGPQRDIVTHVIAGHDALVLMPTGGGKSICYQLPAICRRGVGIVVSPLIALMR 83
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
+Q+ L + G+ A NS ++ A VL+ LR G
Sbjct: 84 NQVEALR-QLGVRAAAFNSSLEAAERATVLRALRAG------------------------ 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER+V + F +L GS+R+ + F +DEA
Sbjct: 119 -ELDLLYVAPERLV-TEDFLALL------GSVRIAL------------------FAIDEA 152
Query: 379 HCV 381
HCV
Sbjct: 153 HCV 155
>gi|338989469|ref|ZP_08634307.1| ATP-dependent DNA helicase RecQ [Acidiphilium sp. PM]
gi|338205598|gb|EGO93896.1| ATP-dependent DNA helicase RecQ [Acidiphilium sp. PM]
Length = 610
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 70/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG+ FR Q +A D VL+PTGGGKS+CYQ
Sbjct: 24 VFGHDGFRGPQRDIVTHVIAGHDALVLMPTGGGKSICYQLPAICRQGVGIVVSPLIALMR 83
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
+Q+ L + G+ A NS ++ A VL+ LR G
Sbjct: 84 NQVEALR-QLGVRAAAFNSSLEAAERATVLRALRAG------------------------ 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER+V + F +L GS+R+ + F +DEA
Sbjct: 119 -ELDLLYVAPERLV-TEDFLALL------GSVRIAL------------------FAIDEA 152
Query: 379 HCV 381
HCV
Sbjct: 153 HCV 155
>gi|306823367|ref|ZP_07456742.1| ATP-dependent helicase RecQ [Bifidobacterium dentium ATCC 27679]
gi|304553074|gb|EFM40986.1| ATP-dependent helicase RecQ [Bifidobacterium dentium ATCC 27679]
Length = 653
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 55/132 (41%), Gaps = 47/132 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG AFRP Q + +A +D ++PTG GKS+CYQ D
Sbjct: 17 FGYEAFRPGQSGIVGSIIAGRDVLGVMPTGAGKSVCYQIPATILPGVAIVISPLISLMRD 76
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN GIPA F+N+ QT + ++V + G +
Sbjct: 77 QVDALN-DAGIPAAFINTTQTPDEQSSVFAQASAGFI----------------------- 112
Query: 320 SCKLLYVTPERI 331
KLLYV PER+
Sbjct: 113 --KLLYVAPERL 122
>gi|421894755|ref|ZP_16325240.1| ATP-dependent DNA helicase RecQ [Pediococcus pentosaceus IE-3]
gi|385272363|emb|CCG90612.1| ATP-dependent DNA helicase RecQ [Pediococcus pentosaceus IE-3]
Length = 584
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 71/182 (39%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG AFRP Q QA A + Q+ ++PTGGGKSLCYQ D
Sbjct: 11 FGYDAFRPGQEQAINAVLDHQNVLAVMPTGGGKSLCYQIPALMQAGLTLVISPLISLMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GI ATF+NS ++ + RQG V
Sbjct: 71 QVDALAAN-GIDATFINSSLDYAEINERFSQARQGAV----------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PER+ ++ F RL L D++ +DEAH
Sbjct: 107 --KLLYISPERL-DSEYFD------------RLAELPIDLI-------------AIDEAH 138
Query: 380 CV 381
C+
Sbjct: 139 CI 140
>gi|113869442|ref|YP_727931.1| ATP-dependent DNA helicase [Ralstonia eutropha H16]
gi|113528218|emb|CAJ94563.1| ATP-dependent DNA helicase [Ralstonia eutropha H16]
Length = 615
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 74/187 (39%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYHAFRGRQAEIIDHVATGGDCLVLMPTGGGKSLCYQIPALLRQRAGDGVGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A LNS T ++A+AV ++L G +
Sbjct: 71 ALMQDQVAALT-EAGVRAAVLNSTLTGAEASAVERDLLAGRI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
++LYV PER++ F ++L+ IR+ + F
Sbjct: 112 -------EILYVAPERLM-TPRFQDLLE------RIRVGL------------------FA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|283787504|ref|YP_003367369.1| ATP-dependent DNA helicase [Citrobacter rodentium ICC168]
gi|282950958|emb|CBG90635.1| ATP-dependent DNA helicase [Citrobacter rodentium ICC168]
Length = 609
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 65/181 (35%), Gaps = 70/181 (38%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q ++ +DC V++PTGGGKSLCYQ + LN
Sbjct: 21 FGYQQFRPGQEAIIDTVMSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKD 80
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS QT Q V+ R G +
Sbjct: 81 QVDQLLANGVAAACLNSTQTREQQLEVMAGCRSGKI------------------------ 116
Query: 321 CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
+LLY+ PER++ + L H A VDEAHC
Sbjct: 117 -RLLYIAPERLMLDN-------------------------FLEHLAHWNPALLAVDEAHC 150
Query: 381 V 381
+
Sbjct: 151 I 151
>gi|442772186|gb|AGC72851.1| ATP-dependent DNA helicase RecQ [uncultured bacterium A1Q1_fos_97]
Length = 607
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 36/175 (20%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFG 269
LD + A FG FRPLQ +A + +D VL+PTGGGKS+C+Q +TL
Sbjct: 3 LDKAKLALKRYFGYDQFRPLQADIIRAIFSGKDALVLMPTGGGKSVCFQIPAVTL----- 57
Query: 270 IPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLI---FVLTCASRKDKPSCKLLYV 326
P T + +S ++ LR + + F++ I L LLYV
Sbjct: 58 -PGTCIVVSPLISLMKDQVEGLRANGIAAA--FINSAIDSREQLRVEESFYAGELDLLYV 114
Query: 327 TPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+PE++V +F +LK +G I L F +DEAHC+
Sbjct: 115 SPEKLVSG-NFVSILK----RGKINL--------------------FAIDEAHCI 144
>gi|399053713|ref|ZP_10742512.1| ATP-dependent DNA helicase, RecQ family [Brevibacillus sp. CF112]
gi|433547048|ref|ZP_20503329.1| ATP-dependent DNA helicase [Brevibacillus agri BAB-2500]
gi|398048490|gb|EJL40962.1| ATP-dependent DNA helicase, RecQ family [Brevibacillus sp. CF112]
gi|432181657|gb|ELK39277.1| ATP-dependent DNA helicase [Brevibacillus agri BAB-2500]
Length = 502
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 72/183 (39%), Gaps = 73/183 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG AFRP Q K + Q L+ TGGGKS+ YQ D
Sbjct: 13 FGYEAFRPGQAAIIKRVLGGQSVLGLMATGGGKSVTYQLPALLLPGITVVVSPLISLMVD 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L K IPA +LNS Q ++A VLQ++ G
Sbjct: 73 QVQQLRTKRRIPAAYLNSTQDPAEAREVLQKIAAG------------------------- 107
Query: 320 SCKLLYVTPERIVGNQSF-SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+CKLLY++PE++ Q + +VL G R+ +L +DEA
Sbjct: 108 ACKLLYISPEKL--QQPYVQQVL------GRARVSLLA------------------IDEA 141
Query: 379 HCV 381
HC+
Sbjct: 142 HCI 144
>gi|383125120|ref|ZP_09945776.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_6]
gi|382983453|gb|EIC72782.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_6]
Length = 620
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 72/182 (39%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + + + KQD VL+PTGGGKS+CYQ D
Sbjct: 28 FGYDSFRPLQEEIIRHLLNKQDSLVLMPTGGGKSICYQLPALLSEGTAVVVSPLISLMKD 87
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL GI A LNS ++ A + + +G
Sbjct: 88 QVETLQAN-GIAAGALNSSNDETENANLRRACIEG------------------------- 121
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + + L R SI L F +DEAH
Sbjct: 122 RLKLLYISPEKLIAEKDY------LLRDMSISL--------------------FAIDEAH 155
Query: 380 CV 381
C+
Sbjct: 156 CI 157
>gi|29347258|ref|NP_810761.1| ATP-dependent DNA helicase RecQ [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339157|gb|AAO76955.1| ATP-dependent DNA helicase recQ [Bacteroides thetaiotaomicron
VPI-5482]
Length = 620
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 72/182 (39%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + + + KQD VL+PTGGGKS+CYQ D
Sbjct: 28 FGYDSFRPLQEEIIRHLLNKQDSLVLMPTGGGKSICYQLPALLSEGTAVVVSPLISLMKD 87
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL GI A LNS ++ A + + +G
Sbjct: 88 QVETLQAN-GIAAGALNSSNDETENANLRRACIEG------------------------- 121
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + + L R SI L F +DEAH
Sbjct: 122 RLKLLYISPEKLIAEKDY------LLRDMSISL--------------------FAIDEAH 155
Query: 380 CV 381
C+
Sbjct: 156 CI 157
>gi|330993558|ref|ZP_08317493.1| ATP-dependent DNA helicase recQ [Gluconacetobacter sp. SXCC-1]
gi|329759588|gb|EGG76097.1| ATP-dependent DNA helicase recQ [Gluconacetobacter sp. SXCC-1]
Length = 597
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 73/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR LQ QA +A +DC VL+PTGGGKS+CYQ
Sbjct: 5 VFGFPDFRGLQQQAVDEVMAGRDCLVLMPTGGGKSVCYQVPALARPGTGLVISPLIALMD 64
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A L+S+ +AA V +L A R D
Sbjct: 65 DQVAALR-QLGVNAGALHSELEPDEAARVRADL--------------------VAGRLD- 102
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+LYV+PER++ L R G + L V+ +DEA
Sbjct: 103 ----ILYVSPERLLSP-------GMLERLGRLTLSVIA------------------IDEA 133
Query: 379 HCV 381
HC+
Sbjct: 134 HCI 136
>gi|298387431|ref|ZP_06996983.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_14]
gi|298259638|gb|EFI02510.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_14]
Length = 601
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 72/182 (39%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + + + KQD VL+PTGGGKS+CYQ D
Sbjct: 9 FGYDSFRPLQEEIIRHLLNKQDSLVLMPTGGGKSICYQLPALLSEGTAVVVSPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL GI A LNS ++ A + + +G
Sbjct: 69 QVETLQAN-GIAAGALNSSNDETENANLRRACIEG------------------------- 102
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ + + L R SI L F +DEAH
Sbjct: 103 RLKLLYISPEKLIAEKDY------LLRDMSISL--------------------FAIDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|332686743|ref|YP_004456517.1| ATP-dependent DNA helicase RecQ [Melissococcus plutonius ATCC
35311]
gi|332370752|dbj|BAK21708.1| ATP-dependent DNA helicase RecQ [Melissococcus plutonius ATCC
35311]
Length = 590
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 79/183 (43%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FRP Q + + +Q+ ++PTGGGKS+CYQ
Sbjct: 11 VFGYEQFRPGQQELINCVLNRQNVLGIMPTGGGKSICYQLPALMLPNLTLVISPLISLMK 70
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ LNL GIPATF+NS T+S +QE+ + L+ DK
Sbjct: 71 DQVDALNL-LGIPATFINS--TIS-----IQEMNHRIQLA-----------------VDK 105
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLY+ PER+ + F ++L LH + DV+ VDEA
Sbjct: 106 -KVKLLYIAPERL-ESYDFQQLL--LH---------VPIDVL-------------AVDEA 139
Query: 379 HCV 381
HC+
Sbjct: 140 HCI 142
>gi|171741015|ref|ZP_02916822.1| hypothetical protein BIFDEN_00081 [Bifidobacterium dentium ATCC
27678]
gi|283455596|ref|YP_003360160.1| ATP-dependent DNA helicase RecQ [Bifidobacterium dentium Bd1]
gi|171276629|gb|EDT44290.1| ATP-dependent DNA helicase RecQ [Bifidobacterium dentium ATCC
27678]
gi|283102230|gb|ADB09336.1| recQ ATP-dependent DNA helicase recQ [Bifidobacterium dentium Bd1]
Length = 653
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 55/132 (41%), Gaps = 47/132 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG AFRP Q + +A +D ++PTG GKS+CYQ D
Sbjct: 17 FGYEAFRPGQSGIVGSIIAGRDVLGVMPTGAGKSVCYQIPATILPGVAIVISPLISLMRD 76
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN GIPA F+N+ QT + ++V + G +
Sbjct: 77 QVDALN-DAGIPAAFINTTQTPDEQSSVFAQASAGFI----------------------- 112
Query: 320 SCKLLYVTPERI 331
KLLYV PER+
Sbjct: 113 --KLLYVAPERL 122
>gi|150025301|ref|YP_001296127.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium psychrophilum
JIP02/86]
gi|149771842|emb|CAL43316.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium psychrophilum
JIP02/86]
Length = 731
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 72/186 (38%), Gaps = 77/186 (41%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------- 258
FG F+ LQ Q K+ VAK + FV++PTGGGKSLCYQ
Sbjct: 16 FGFNQFKGLQEQVIKSIVAKHNSFVIMPTGGGKSLCYQLPALMQGGTAIVVSPLIALMKN 75
Query: 259 --DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRK 316
D I +L+ + GI A LNS T ++ A V +++ GL
Sbjct: 76 QVDAIRSLSSEAGI-AHVLNSSLTKTEIAQVKKDISSGL--------------------- 113
Query: 317 DKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV-V 375
KLLYV PE + + + Q++ FV +
Sbjct: 114 ----TKLLYVAPESLTKEEYVT--------------------------FLQKEKISFVAI 143
Query: 376 DEAHCV 381
DEAHC+
Sbjct: 144 DEAHCI 149
>gi|392963657|ref|ZP_10329081.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
gi|387847620|emb|CCH51120.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
Length = 715
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
+G FRP+Q ++ + +D VL+PTGGGKS+C+Q D
Sbjct: 25 YGYDRFRPMQEDIVRSILRGRDTLVLMPTGGGKSVCFQIPALMMPGICVVVSPLIALMKD 84
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L++ GIPA F NS Q+ + A+ + +G +
Sbjct: 85 QVEALHMN-GIPAAFYNSTQSGKEQRAIEDDCVKGKI----------------------- 120
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV+PE+++ +SF LK ++ ++ F +DEAH
Sbjct: 121 --KLLYVSPEKML-TESFFVFLKRIN------------------------ISLFAIDEAH 153
Query: 380 CV 381
C+
Sbjct: 154 CI 155
>gi|345863268|ref|ZP_08815480.1| ATP-dependent DNA helicase RecQ [endosymbiont of Tevnia jerichonana
(vent Tica)]
gi|345125729|gb|EGW55597.1| ATP-dependent DNA helicase RecQ [endosymbiont of Tevnia jerichonana
(vent Tica)]
Length = 608
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 69/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG + FR Q + + D V++PTGGGKSLCY QD
Sbjct: 15 FGYQQFRGQQAEIIQQLSEGGDALVIMPTGGGKSLCYQIPSLLRDGVGIIVSPLIALMQD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN + GI A FLNS AA + ELR G
Sbjct: 75 QVAALN-ELGIQAAFLNSTLEPQAAAQIETELRSG------------------------- 108
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ LLY+ PER++ ++ LK+L + L F +DEAH
Sbjct: 109 TLDLLYLAPERLLQPRT---------------LKLLAQSPIAL----------FAIDEAH 143
Query: 380 CV 381
CV
Sbjct: 144 CV 145
>gi|339327532|ref|YP_004687225.1| ATP-dependent DNA helicase RecQ [Cupriavidus necator N-1]
gi|338167689|gb|AEI78744.1| ATP-dependent DNA helicase RecQ [Cupriavidus necator N-1]
Length = 628
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 74/187 (39%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + DC VL+PTGGGKSLCY
Sbjct: 24 VFGYHAFRGRQAEIIDHVATGGDCLVLMPTGGGKSLCYQIPALLRQRAGDGVGIVVSPLI 83
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A LNS T ++A+AV ++L G +
Sbjct: 84 ALMQDQVAALT-EAGVRAAVLNSTLTGAEASAVERDLLAGRI------------------ 124
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
++LYV PER++ F ++L+ IR+ + F
Sbjct: 125 -------EILYVAPERLM-TPRFQDLLE------RIRVGL------------------FA 152
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 153 IDEAHCV 159
>gi|114778864|ref|ZP_01453663.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Mariprofundus ferrooxydans PV-1]
gi|114550899|gb|EAU53464.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Mariprofundus ferrooxydans PV-1]
Length = 724
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 71/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
IFG FRP+Q + + +D FVL+PTGGGKS+CYQ
Sbjct: 19 IFGYDMFRPMQEEIICNLLDGKDAFVLMPTGGGKSICYQIPAIMREGTGIVVSPLISLMK 78
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+ A + NS ++A VL+ G
Sbjct: 79 DQVDALT-ACGVKAAYYNSSLKAAEAKDVLERFEAG------------------------ 113
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER++ ++SF L+ L +L+ F +DEA
Sbjct: 114 -ELDLLYVAPERLL-SKSFLTKLEKL------------------------KLSMFAIDEA 147
Query: 379 HCV 381
HCV
Sbjct: 148 HCV 150
>gi|290513154|ref|ZP_06552516.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. 1_1_55]
gi|289774365|gb|EFD82371.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. 1_1_55]
Length = 618
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 67/182 (36%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + + +DC V++PTGGGKSLCYQ D
Sbjct: 31 FGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISLMKD 90
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS Q+ Q V+ R G V
Sbjct: 91 QVDQL-LANGVAAACLNSTQSREQQQEVMAGCRSGQV----------------------- 126
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLY+ PER++ + L H LA VDEAH
Sbjct: 127 --RLLYIAPERLMLDN-------------------------FLEHLANWNLAMLAVDEAH 159
Query: 380 CV 381
C+
Sbjct: 160 CI 161
>gi|288937759|ref|YP_003441818.1| ATP-dependent DNA helicase RecQ [Klebsiella variicola At-22]
gi|288892468|gb|ADC60786.1| ATP-dependent DNA helicase RecQ [Klebsiella variicola At-22]
Length = 608
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 67/182 (36%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + + +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS Q+ Q V+ R G V
Sbjct: 81 QVDQL-LANGVAAACLNSTQSREQQQEVMAGCRSGQV----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLY+ PER++ + L H LA VDEAH
Sbjct: 117 --RLLYIAPERLMLDN-------------------------FLEHLANWNLAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|397655279|ref|YP_006495981.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca E718]
gi|394344006|gb|AFN30127.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca E718]
Length = 608
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 66/181 (36%), Gaps = 70/181 (38%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q ++A +DC V++PTGGGKSLCYQ + L
Sbjct: 21 FGYQQFRPGQETIIDTALAGRDCLVVMPTGGGKSLCYQVPALVLGGLTVVVSPLISLMKD 80
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS Q+ Q V+ R G +
Sbjct: 81 QVDQLLANGVAAACLNSTQSREQQQDVMAGCRSGQI------------------------ 116
Query: 321 CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
+LLY+ PER++ + L H L+ VDEAHC
Sbjct: 117 -RLLYIAPERLMLDN-------------------------FLEHLTHWNLSMVAVDEAHC 150
Query: 381 V 381
+
Sbjct: 151 I 151
>gi|379727252|ref|YP_005319437.1| ATP-dependent DNA helicase RecQ [Melissococcus plutonius DAT561]
gi|376318155|dbj|BAL61942.1| ATP-dependent DNA helicase RecQ [Melissococcus plutonius DAT561]
Length = 590
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 79/183 (43%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FRP Q + + +Q+ ++PTGGGKS+CYQ
Sbjct: 11 VFGYEQFRPGQQELINCVLNRQNVLGIMPTGGGKSICYQLPALMLPNLTLVISPLISLMK 70
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ LNL GIPATF+NS T+S +QE+ + L+ DK
Sbjct: 71 DQVDALNL-LGIPATFINS--TIS-----IQEMNHRIQLA-----------------VDK 105
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLY+ PER+ + F ++L LH + DV+ VDEA
Sbjct: 106 -KVKLLYIAPERL-ESYDFQQLL--LH---------VPIDVL-------------AVDEA 139
Query: 379 HCV 381
HC+
Sbjct: 140 HCI 142
>gi|345879659|ref|ZP_08831273.1| hypothetical protein Rifp1Sym_fy00030 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344223322|gb|EGV49811.1| hypothetical protein Rifp1Sym_fy00030 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 612
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 69/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG + FR Q + + D V++PTGGGKSLCY QD
Sbjct: 15 FGYQQFRGQQAEIIQQLSEGGDALVIMPTGGGKSLCYQIPSLLRDGVGIIVSPLIALMQD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN + GI A FLNS AA + ELR G
Sbjct: 75 QVAALN-ELGIQAAFLNSTLEPQAAAQIETELRSG------------------------- 108
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ LLY+ PER++ ++ LK+L + L F +DEAH
Sbjct: 109 TLDLLYLAPERLLQPRT---------------LKLLAQSPIAL----------FAIDEAH 143
Query: 380 CV 381
CV
Sbjct: 144 CV 145
>gi|385331459|ref|YP_005885410.1| ATP-dependent DNA helicase RecQ [Marinobacter adhaerens HP15]
gi|311694609|gb|ADP97482.1| ATP-dependent DNA helicase RecQ [Marinobacter adhaerens HP15]
Length = 622
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 68/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG +FRPLQ + +D VL+PTGGGKSLCY Q
Sbjct: 29 VFGYESFRPLQGDIIREVSEGRDALVLMPTGGGKSLCYQVPALVRSGTAIVISPLIALMQ 88
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A FLNS QA A L G
Sbjct: 89 DQVAALK-ELGVRAAFLNSTMDFEQARATEYALMTG------------------------ 123
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLY PER++ ++ ++ LH SI L F +DEA
Sbjct: 124 -ELDLLYCAPERLIQPRT----IELLH-DASISL--------------------FAIDEA 157
Query: 379 HCV 381
HCV
Sbjct: 158 HCV 160
>gi|388565315|ref|ZP_10151808.1| ATP-dependent DNA helicase RecQ [Hydrogenophaga sp. PBC]
gi|388267430|gb|EIK92927.1| ATP-dependent DNA helicase RecQ [Hydrogenophaga sp. PBC]
Length = 630
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 70/187 (37%), Gaps = 72/187 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG AFR Q Q D VL+PTGGGKSLCYQ
Sbjct: 21 VFGYEAFRGPQAQIVTHVCEGGDALVLMPTGGGKSLCYQVPAIVRAQGGRGVAVVVSPLI 80
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L + G+ A +LNS ++ A + +LR+G
Sbjct: 81 ALMHDQVGALT-EAGVSAAYLNSSLSLEDAQRIELQLRRG-------------------- 119
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ +L+ LH +G + L F
Sbjct: 120 -----DLTLLYVAPERLL-TPRCQAMLESLHEQGRLSL--------------------FA 153
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 154 IDEAHCV 160
>gi|423126736|ref|ZP_17114415.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5250]
gi|376396730|gb|EHT09369.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5250]
Length = 608
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 66/181 (36%), Gaps = 70/181 (38%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q ++A +DC V++PTGGGKSLCYQ + L
Sbjct: 21 FGYQQFRPGQETIIDTALAGRDCLVVMPTGGGKSLCYQVPALVLGGLTVVVSPLISLMKD 80
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS Q+ Q V+ R G +
Sbjct: 81 QVDQLLANGVAAACLNSTQSREQQQDVMAGCRSGQI------------------------ 116
Query: 321 CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
+LLY+ PER++ + L H L+ VDEAHC
Sbjct: 117 -RLLYIAPERLMLDN-------------------------FLEHLTHWNLSMVAVDEAHC 150
Query: 381 V 381
+
Sbjct: 151 I 151
>gi|309802722|ref|ZP_07696826.1| ATP-dependent DNA helicase, RecQ family [Bifidobacterium dentium
JCVIHMP022]
gi|308220786|gb|EFO77094.1| ATP-dependent DNA helicase, RecQ family [Bifidobacterium dentium
JCVIHMP022]
Length = 296
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 55/132 (41%), Gaps = 47/132 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG AFRP Q + +A +D ++PTG GKS+CYQ D
Sbjct: 17 FGYEAFRPGQSGIVGSIIAGRDVLGVMPTGAGKSVCYQIPATILPGVAIVISPLISLMRD 76
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN GIPA F+N+ QT + ++V + G +
Sbjct: 77 QVDALN-DAGIPAAFINTTQTPDEQSSVFAQASAGFI----------------------- 112
Query: 320 SCKLLYVTPERI 331
KLLYV PER+
Sbjct: 113 --KLLYVAPERL 122
>gi|148261092|ref|YP_001235219.1| ATP-dependent DNA helicase RecQ [Acidiphilium cryptum JF-5]
gi|146402773|gb|ABQ31300.1| ATP-dependent DNA helicase RecQ [Acidiphilium cryptum JF-5]
Length = 625
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 70/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG+ FR Q +A D VL+PTGGGKS+CYQ
Sbjct: 39 VFGHDGFRGPQRDIVTHVIAGHDALVLMPTGGGKSICYQLPAICRRGVGIVVSPLIALMR 98
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
+Q+ L + G+ A NS ++ A VL+ LR G
Sbjct: 99 NQVEALR-QLGVRAAAFNSSLEAAERATVLRALRAG------------------------ 133
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER+V + F +L GS+R+ + F +DEA
Sbjct: 134 -ELDLLYVAPERLV-TEDFLALL------GSVRIAL------------------FAIDEA 167
Query: 379 HCV 381
HCV
Sbjct: 168 HCV 170
>gi|421724743|ref|ZP_16163951.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca M5al]
gi|410374417|gb|EKP29090.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca M5al]
Length = 608
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 66/181 (36%), Gaps = 70/181 (38%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q ++A +DC V++PTGGGKSLCYQ + L
Sbjct: 21 FGYQQFRPGQDTIIDTALAGRDCLVVMPTGGGKSLCYQVPALVLGGLTVVVSPLISLMKD 80
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS Q+ Q V+ R G +
Sbjct: 81 QVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQI------------------------ 116
Query: 321 CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
+LLY+ PER++ + L H L+ VDEAHC
Sbjct: 117 -RLLYIAPERLMLDN-------------------------FLEHLTHWNLSMVAVDEAHC 150
Query: 381 V 381
+
Sbjct: 151 I 151
>gi|410663371|ref|YP_006915742.1| ATP-dependent DNA helicase RecQ [Simiduia agarivorans SA1 = DSM
21679]
gi|409025728|gb|AFU98012.1| ATP-dependent DNA helicase RecQ [Simiduia agarivorans SA1 = DSM
21679]
Length = 705
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG AFRP Q + D V++PTGGGKSLCY QD
Sbjct: 13 FGYSAFRPPQDEIIDTVTHGGDALVIMPTGGGKSLCYQIPSLARAGCGVVISPLIALMQD 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + G+ A +LNS + ++ A++ Q L G
Sbjct: 73 QVDALA-QLGVSAGYLNSTLSPTEQASIEQALVAG------------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
LLY+ PER+ NQ + + LH Q +LA F +DEAH
Sbjct: 107 ELDLLYIAPERL--NQ--ARTINLLH---------------------QARLALFAIDEAH 141
Query: 380 CV 381
CV
Sbjct: 142 CV 143
>gi|206578880|ref|YP_002241119.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae 342]
gi|206567938|gb|ACI09714.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae 342]
Length = 608
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 67/182 (36%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + + +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVMGGLTVVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS Q+ Q V+ R G V
Sbjct: 81 QVDQL-LANGVAAACLNSTQSREQQQEVMAGCRSGQV----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLY+ PER++ + L H LA VDEAH
Sbjct: 117 --RLLYIAPERLMLDN-------------------------FLEHLANWNLAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|358447908|ref|ZP_09158417.1| ATP-dependent DNA helicase RecQ, partial [Marinobacter
manganoxydans MnI7-9]
gi|357227798|gb|EHJ06254.1| ATP-dependent DNA helicase RecQ, partial [Marinobacter
manganoxydans MnI7-9]
Length = 603
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 68/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG +FRPLQ + +D VL+PTGGGKSLCY Q
Sbjct: 29 VFGYESFRPLQGDIIREVSEGRDALVLMPTGGGKSLCYQVPALVRSGTAIVISPLIALMQ 88
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A FLNS QA A L G
Sbjct: 89 DQVAALK-ELGVRAAFLNSTMDFEQARATEYALMTG------------------------ 123
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLY PER++ ++ ++ LH SI L F +DEA
Sbjct: 124 -ELDLLYCAPERLIQPRT----IELLH-DASISL--------------------FAIDEA 157
Query: 379 HCV 381
HCV
Sbjct: 158 HCV 160
>gi|396461165|ref|XP_003835194.1| similar to ATP-dependent DNA helicase recQ [Leptosphaeria maculans
JN3]
gi|312211745|emb|CBX91829.1| similar to ATP-dependent DNA helicase recQ [Leptosphaeria maculans
JN3]
Length = 518
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 34/183 (18%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI 270
D++F +F FRPLQ + A++ +D F+ T GKSLCYQ ++ K+ I
Sbjct: 11 DIDFTLKRVFKKPVFRPLQREVIIATLEGEDVFLQAATSFGKSLCYQLPAVVDFGSKWNI 70
Query: 271 PATF-LNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK----------- 318
+ V+ + L L V S + ++ + + S++D+
Sbjct: 71 YTIRSCTKKMKVTIVISPLLALMNNQVASMRHANIRVETINSTTSQEDRARIIEDLQCGH 130
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
P +LLYVTPE G+ F ++L+ +H QR+LA VDEA
Sbjct: 131 PLTRLLYVTPEFCQGDH-FRKILRVIH--------------------SQRELARIAVDEA 169
Query: 379 HCV 381
HCV
Sbjct: 170 HCV 172
>gi|374261468|ref|ZP_09620050.1| hypothetical protein LDG_6438 [Legionella drancourtii LLAP12]
gi|363538095|gb|EHL31507.1| hypothetical protein LDG_6438 [Legionella drancourtii LLAP12]
Length = 607
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 69/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FR Q K +A D VL+PTGGGKSLCYQ D
Sbjct: 22 FGFDSFRNPQEDIIKDVIAGNDVLVLMPTGGGKSLCYQIPSLVRPGVGIVVSPLIALMED 81
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L+ GI A + NS T +A VL +L
Sbjct: 82 QVTALRLQ-GIRAAYYNSSLTSEEAKKVLAQLHNA------------------------- 115
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
LLY+ PER++ + SF E L+ H ++ F +DEAH
Sbjct: 116 ELDLLYIAPERLI-SASFLERLQECH------------------------ISLFAIDEAH 150
Query: 380 CV 381
C+
Sbjct: 151 CI 152
>gi|224095634|ref|XP_002200254.1| PREDICTED: ATP-dependent DNA helicase Q1 [Taeniopygia guttata]
Length = 661
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 70/181 (38%), Gaps = 65/181 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
F + FR LQ + A++A +D F+++PTGGGKSLCYQ D
Sbjct: 87 FKLQKFRSLQLETVNAAMAGKDIFLVMPTGGGKSLCYQLPAVCSDGFTLVICPLISLMED 146
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L + GI A LN+ + V E+ K
Sbjct: 147 QLMVLE-QLGISAALLNASSSKEHVKWVHTEM-----------------------LKRNS 182
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KL+YVTPE+I ++ F L+ ++ G LA VDE H
Sbjct: 183 QLKLIYVTPEKIAKSKMFMSKLEKAYQAGC--------------------LARIAVDEVH 222
Query: 380 C 380
C
Sbjct: 223 C 223
>gi|218438410|ref|YP_002376739.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 7424]
gi|218171138|gb|ACK69871.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 7424]
Length = 709
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 80/193 (41%), Gaps = 68/193 (35%)
Query: 210 LDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------ 257
L+ +E A FG FRP Q + + ++ +D V++PTGGGKSLC+
Sbjct: 5 LNTLETALKQYFGYDNFRPGQREIIEEALENRDLLVIMPTGGGKSLCFQLPALLKPGVTV 64
Query: 258 ---------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIF 308
QDQ+ L L GI ATFLNS S+ + R+ +L
Sbjct: 65 VVSPLISLMQDQVDAL-LDNGIGATFLNSSLDFSEIRS-----RETAIL----------- 107
Query: 309 VLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR 368
+ KLLYV PER++ ++ F+ L + ++ I
Sbjct: 108 ---------RNKIKLLYVAPERLL-SEKFTPFLDTIAQQVGI------------------ 139
Query: 369 QLAGFVVDEAHCV 381
+ F +DEAHCV
Sbjct: 140 --SAFAIDEAHCV 150
>gi|424775779|ref|ZP_18202769.1| ATP-dependent DNA helicase [Alcaligenes sp. HPC1271]
gi|422888879|gb|EKU31261.1| ATP-dependent DNA helicase [Alcaligenes sp. HPC1271]
Length = 608
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 69/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG +FR QH+ + + D VL+PTGGGKSLCY Q
Sbjct: 12 VFGYDSFRGSQHEIIETLIQGGDALVLMPTGGGKSLCYQIPALVRTGTGVVVSPLIALMQ 71
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ LN + G+ A +LNS Q A V +E G
Sbjct: 72 DQVDALN-ELGVNAAYLNSTQDWQTAREVEREFLTG------------------------ 106
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER++ ++ L +G I L F +DEA
Sbjct: 107 -QLDLLYVAPERLLTDRCLD-----LLARGQISL--------------------FAIDEA 140
Query: 379 HCV 381
HCV
Sbjct: 141 HCV 143
>gi|326936139|ref|XP_003214115.1| PREDICTED: Bloom syndrome protein homolog, partial [Meleagris
gallopavo]
Length = 136
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 45/131 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FR Q +A A++ +DCF+L+PTGGGKSLCYQ D
Sbjct: 30 FGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIID 89
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L I AT+L T + A+ + +L S+KD P
Sbjct: 90 QVQKLK-TLDIAATYLTGDITDADASKIYMQL----------------------SKKD-P 125
Query: 320 SCKLLYVTPER 330
KLLYVTPE+
Sbjct: 126 IIKLLYVTPEK 136
>gi|401765702|ref|YP_006580709.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400177236|gb|AFP72085.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 609
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 54/132 (40%), Gaps = 45/132 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q + + +DC V++PTGGGKSLCYQ + LN
Sbjct: 21 FGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLMKD 80
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS QT Q V+ R G V
Sbjct: 81 QVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQV------------------------ 116
Query: 321 CKLLYVTPERIV 332
+LLY+ PER++
Sbjct: 117 -RLLYIAPERLM 127
>gi|91978870|ref|YP_571529.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris BisB5]
gi|91685326|gb|ABE41628.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris BisB5]
Length = 619
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 70/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR Q Q + DC VL+PTGGGKSLCYQ
Sbjct: 23 VFGLPGFRGHQEQIVRHVAGGGDCLVLMPTGGGKSLCYQLPALLRDGCGIVVSPLIALMR 82
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L L+ G+ A LNS + ++A A+ ++L G
Sbjct: 83 DQVAGL-LEAGVRAAALNSSLSYAEADAIERQLLSG------------------------ 117
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER++ + S + + +L+ F +DEA
Sbjct: 118 -ELDLLYVAPERLLTPRCLSMLARA-------------------------KLSLFAIDEA 151
Query: 379 HCV 381
HCV
Sbjct: 152 HCV 154
>gi|419958981|ref|ZP_14475038.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae GS1]
gi|388605950|gb|EIM35163.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae GS1]
Length = 609
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 54/132 (40%), Gaps = 45/132 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q + + +DC V++PTGGGKSLCYQ + LN
Sbjct: 21 FGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLMKD 80
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS QT Q V+ R G V
Sbjct: 81 QVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQV------------------------ 116
Query: 321 CKLLYVTPERIV 332
+LLY+ PER++
Sbjct: 117 -RLLYIAPERLM 127
>gi|254425231|ref|ZP_05038949.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 7335]
gi|196192720|gb|EDX87684.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 7335]
Length = 738
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 73/182 (40%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG+ FR Q + + +D V++PTGGGKSLCY QD
Sbjct: 16 FGHDQFRFEQRSIVEQVLKNKDVLVIMPTGGGKSLCYQLPALLRPGTTIVISPLIALMQD 75
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L GI ATFLNS + + + ++L G +
Sbjct: 76 QVVALK-DNGIEATFLNSTLSFEEVRSRQKDLLMGKI----------------------- 111
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K+LY+ PER+ + SF + LK L +K I + F +DEAH
Sbjct: 112 --KILYIAPERLFTS-SFHDFLKQLSQKVGI--------------------STFAIDEAH 148
Query: 380 CV 381
CV
Sbjct: 149 CV 150
>gi|219111971|ref|XP_002177737.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410622|gb|EEC50551.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 504
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 68/161 (42%), Gaps = 20/161 (12%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG++ FR Q + K ++ D FVL+PTGGGKSLCYQ + + L+ Q
Sbjct: 9 FGHQEFRAGQQKIIKNAIQGCDIFVLMPTGGGKSLCYQLPAWCCPGLAVVISPLLSLIQD 68
Query: 281 VSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEV 340
QA L L +Q Y Q+ KLLY+TPE++ + +
Sbjct: 69 QVQALTQLGIEAVFLASTQDYQTEQMDITRRLNETTAHGGVKLLYITPEKLNNSTMIQNI 128
Query: 341 LKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
++ L K I + FVVDEAHC+
Sbjct: 129 IRRLCNKNLI--------------------SRFVVDEAHCL 149
>gi|365972647|ref|YP_004954208.1| ATP-dependent DNA helicase recQ [Enterobacter cloacae EcWSU1]
gi|365751560|gb|AEW75787.1| ATP-dependent DNA helicase recQ [Enterobacter cloacae EcWSU1]
Length = 630
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 54/132 (40%), Gaps = 45/132 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q + + +DC V++PTGGGKSLCYQ + LN
Sbjct: 42 FGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLMKD 101
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS QT Q V+ R G V
Sbjct: 102 QVDQLLANGVAAACLNSSQTREQQQEVMAGCRTGQV------------------------ 137
Query: 321 CKLLYVTPERIV 332
+LLY+ PER++
Sbjct: 138 -RLLYIAPERLM 148
>gi|326912433|ref|XP_003202555.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Meleagris gallopavo]
Length = 661
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 73/182 (40%), Gaps = 67/182 (36%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
F + FR LQ + A++A +D F+++PTGGGKSLCYQ D
Sbjct: 87 FKLQKFRSLQLETVNATMAGKDIFLVMPTGGGKSLCYQLPAVCSDGFTLVICPLISLMED 146
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q++ L + GI AT LN+ + V ++ D+
Sbjct: 147 QLMVLE-QLGISATLLNASSSKEHVKWVHTQML------------------------DRN 181
Query: 320 S-CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
S KLLYVTPE+I ++ F L+ ++ G LA VDE
Sbjct: 182 SQLKLLYVTPEKIAKSKMFMSKLEKAYQAGC--------------------LARIAVDEV 221
Query: 379 HC 380
HC
Sbjct: 222 HC 223
>gi|307721849|ref|YP_003892989.1| ATP-dependent DNA helicase RecQ [Sulfurimonas autotrophica DSM
16294]
gi|306979942|gb|ADN09977.1| ATP-dependent DNA helicase RecQ [Sulfurimonas autotrophica DSM
16294]
Length = 591
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 72/169 (42%), Gaps = 46/169 (27%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNS-QQ 279
FG+ +FR LQ + A + QD ++LPTGGGKSL YQ +P ++
Sbjct: 10 FGHNSFRELQEEGVDAILNAQDLLMILPTGGGKSLVYQ-----------LPTMLMDGITI 58
Query: 280 TVSQAAAVLQELRQGLVLSQHYFLHQLIF-------VLTCASRKDKPSCKLLYVTPERIV 332
VS A++Q+ Q L Q+I V + S K LY++PER+
Sbjct: 59 VVSPLIALMQD--QVRALQAQNIAAQMISSAQSYDEVQDIIAMAHNGSLKFLYLSPERL- 115
Query: 333 GNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
N + E+L+ LH + FV+DEAHC+
Sbjct: 116 NNGNTIELLRSLH------------------------VNFFVIDEAHCI 140
>gi|300714809|ref|YP_003739612.1| ATP-dependent DNA helicase [Erwinia billingiae Eb661]
gi|299060645|emb|CAX57752.1| ATP-dependent DNA helicase [Erwinia billingiae Eb661]
Length = 608
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q +AS+ +DC V++PTGGGKSLCYQ D
Sbjct: 20 FGYQHFRPGQQSIIQASLNGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 79
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS QT + V+ R G V
Sbjct: 80 QVDQL-LANGVSAACLNSTQTREEQQEVMAGCRTGKV----------------------- 115
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLY+ PER++ + +L H LA VDEAH
Sbjct: 116 --RLLYIAPERLMMDNFLDNLL----------------------HWNPAMLA---VDEAH 148
Query: 380 CV 381
C+
Sbjct: 149 CI 150
>gi|390567610|ref|ZP_10247937.1| ATP-dependent DNA helicase RecQ [Burkholderia terrae BS001]
gi|389940427|gb|EIN02229.1| ATP-dependent DNA helicase RecQ [Burkholderia terrae BS001]
Length = 615
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 74/187 (39%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVSSGGDCLVLMPTGGGKSLCYQIPSLVRREAGLGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + + AAA + LR+G +
Sbjct: 71 ALMQDQVAALR-EVGVRAAYLNSTLSGADAAATERALREGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++++ + ++ F
Sbjct: 112 -------DLLYVAPERLM-TPRFLDLIE------------------------RARIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|420248062|ref|ZP_14751435.1| ATP-dependent DNA helicase RecQ [Burkholderia sp. BT03]
gi|398069383|gb|EJL60741.1| ATP-dependent DNA helicase RecQ [Burkholderia sp. BT03]
Length = 615
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 74/187 (39%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYPAFRGQQGEIVEHVSSGGDCLVLMPTGGGKSLCYQIPSLVRREAGLGAGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A +LNS + + AAA + LR+G +
Sbjct: 71 ALMQDQVAALR-EVGVRAAYLNSTLSGADAAATERALREGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLYV PER++ F ++++ + ++ F
Sbjct: 112 -------DLLYVAPERLM-TPRFLDLIE------------------------RARIGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|421853205|ref|ZP_16285883.1| DNA helicase RecQ [Acetobacter pasteurianus subsp. pasteurianus LMG
1262 = NBRC 106471]
gi|371478547|dbj|GAB31086.1| DNA helicase RecQ [Acetobacter pasteurianus subsp. pasteurianus LMG
1262 = NBRC 106471]
Length = 626
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 87/226 (38%), Gaps = 82/226 (36%)
Query: 177 VSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKA 236
+ T S S+ S S L D G E LQA +FG FR LQ QA +
Sbjct: 2 IETGSISTPSQFSHSRLERDRFAGKPPQEVLQA----------VFGFPGFRSLQAQAVEC 51
Query: 237 SVAKQDCFVLLPTGGGKSLCYQ---------------------DQIITLNLKFGIPATFL 275
+ +D VL+PTGGGKS+CYQ DQ+ L + GI A L
Sbjct: 52 VMEGRDTLVLMPTGGGKSVCYQIPALCREGMGLVISPLIALMDDQVAGLR-QLGINAAAL 110
Query: 276 NSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQ 335
+S+ +AA + +L G + LLY++PER++ +
Sbjct: 111 HSELEGDEAAKIRSDLANGRI-------------------------DLLYISPERLLSSG 145
Query: 336 SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ +++ I L V+ +DEAHC+
Sbjct: 146 TLDRLVR-------IPLSVIA------------------IDEAHCI 166
>gi|91204323|emb|CAJ71976.1| strongly similar to ATP-dependent DNA helicase [Candidatus Kuenenia
stuttgartiensis]
Length = 772
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG F PLQ + + ++D FVL+PTGGGKSLCYQ D
Sbjct: 67 FGYSKFYPLQEDIIRWVLEQKDLFVLMPTGGGKSLCYQLPALLFDGITVVISPLIALMKD 126
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + GI ATF+NS + AA ++L +G +
Sbjct: 127 QVDGLT-ENGISATFINSSVHAREVAARKRDLLEGKI----------------------- 162
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K+LY+ PER+ + E L+ L LKV + F +DE+H
Sbjct: 163 --KILYIAPERL----AMREFLQFLQ-----ELKV----------------SLFAIDESH 195
Query: 380 CV 381
C+
Sbjct: 196 CI 197
>gi|427788647|gb|JAA59775.1| Putative atp-dependent dna helicase [Rhipicephalus pulchellus]
Length = 924
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 46/175 (26%)
Query: 220 IFGNRAFRP-LQHQACKASVAK--QDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLN 276
+FG++++R LQ +A +A VA+ QD FV +PTG GKSLC+Q +PA +
Sbjct: 32 VFGHKSYRSGLQKKAIEA-VAQCGQDVFVSMPTGAGKSLCFQ-----------LPAVVVP 79
Query: 277 SQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS------RKD----KPSCKLLYV 326
+ ++ + L + + T +S R+D P +LLYV
Sbjct: 80 KDSVTVVVSPLIALMTDQLQKLKSLNVRAETINSTMSSLERQRVRRDLMSMSPETRLLYV 139
Query: 327 TPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
TPE+ V ++ F VL L++ G +L+ FVVDEAHCV
Sbjct: 140 TPEQ-VASEKFQAVLSALYKIG--------------------KLSRFVVDEAHCV 173
>gi|434406622|ref|YP_007149507.1| ATP-dependent DNA helicase RecQ [Cylindrospermum stagnale PCC 7417]
gi|428260877|gb|AFZ26827.1| ATP-dependent DNA helicase RecQ [Cylindrospermum stagnale PCC 7417]
Length = 723
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FRP Q Q + ++ +D +++PTGGGKSLC+Q + LK G+
Sbjct: 15 FGYDQFRPGQRQIIEDALQNRDLLIIMPTGGGKSLCFQ---LPALLKPGLTV-------V 64
Query: 281 VSQAAAVLQELRQGLVLSQ--HYFLHQLIFVLTCASRKD---KPSCKLLYVTPERIVGNQ 335
VS A++Q+ + L + FL+ + SR++ + KLLYV PER++ ++
Sbjct: 65 VSPLIALMQDQVEALRTNNISATFLNSSLNAFKVRSREEALLQGKIKLLYVAPERLL-SE 123
Query: 336 SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F +L + K I + F +DEAHCV
Sbjct: 124 RFLPLLDLVKEKIGI--------------------STFAIDEAHCV 149
>gi|91775306|ref|YP_545062.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|91775450|ref|YP_545206.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|91709293|gb|ABE49221.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|91709437|gb|ABE49365.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|167042457|gb|ABZ07183.1| putative DEAD/DEAH box helicase [uncultured marine microorganism
HF4000_ANIW133B20]
Length = 611
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 66/182 (36%), Gaps = 68/182 (37%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG AFR Q V D VL+PTGGGKSLCY QD
Sbjct: 15 FGYSAFRGEQEAIVNHVVDGGDALVLMPTGGGKSLCYQIPSLLRPGVGIVVSPLIALMQD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + GI A FLNS A V Q L +G
Sbjct: 75 QVDALR-QLGIQAAFLNSSLDADTARHVYQALMRG------------------------- 108
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K+LYV PER++ SF L + ++ I L F +DEAH
Sbjct: 109 ELKVLYVAPERLM-TPSFLSTLHDIQQRFGIAL--------------------FAIDEAH 147
Query: 380 CV 381
CV
Sbjct: 148 CV 149
>gi|427727826|ref|YP_007074063.1| ATP-dependent DNA helicase RecQ [Nostoc sp. PCC 7524]
gi|427363745|gb|AFY46466.1| ATP-dependent DNA helicase RecQ [Nostoc sp. PCC 7524]
Length = 718
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 36/166 (21%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FRP Q Q + ++ +D V++PTGGGKSLC+Q + +K G+
Sbjct: 15 FGYDQFRPGQRQIIEDALQNRDLLVVMPTGGGKSLCFQ---LPALMKSGLTV-------V 64
Query: 281 VSQAAAVLQELRQGLVLSQ--HYFLHQLIFVLTCASRKD---KPSCKLLYVTPERIVGNQ 335
VS A++Q+ + L + FL+ + SR+D +LLYV PER++ ++
Sbjct: 65 VSPLIALMQDQVEALRNNNISATFLNSSLNPYQVRSREDAILNGKVRLLYVAPERLL-SE 123
Query: 336 SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F L +H K I + F +DEAHCV
Sbjct: 124 RFLPFLDLVHEKIGISI--------------------FAIDEAHCV 149
>gi|367054328|ref|XP_003657542.1| hypothetical protein THITE_2123367 [Thielavia terrestris NRRL 8126]
gi|347004808|gb|AEO71206.1| hypothetical protein THITE_2123367 [Thielavia terrestris NRRL 8126]
Length = 483
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 34/175 (19%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-----DQIITLNL 266
D++F F +FRP Q + A++ +D FV T GKSLC+Q D+ IT+ +
Sbjct: 11 DIDFTLRRQFNKESFRPFQREIILAALDGKDVFVQAATSFGKSLCFQLPAVIDRGITIVI 70
Query: 267 KFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYV 326
+ + +N + + A + L L++ +++Q + P +LLYV
Sbjct: 71 S-PLLSLMMNQVEALRAANVDARTLNSNTPLAERDYIYQDLAT-------GHPHTRLLYV 122
Query: 327 TPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
TPE + F E LK +H Q++LA VVDEAHC+
Sbjct: 123 TPE-LCSLDRFRERLKLVHE--------------------QKELARVVVDEAHCI 156
>gi|295133854|ref|YP_003584530.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
gi|294981869|gb|ADF52334.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
Length = 702
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 71/182 (39%), Gaps = 74/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + ++ +D V++PTGGGKS+CYQ D
Sbjct: 14 FGYDSFRPLQEKIIQSIFDGKDNLVIMPTGGGKSICYQLPAILLPKLTIVISPLIALMKD 73
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GI A FLNS Q V+ ++ Q++ DK
Sbjct: 74 QVDGLKAN-GIKAEFLNSSQQVADQESIFQKI-------------------------DKN 107
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PE L+ L R LT + + L +DEAH
Sbjct: 108 ELKLLYVAPES----------LQILDR-------FLTEENISL----------IAIDEAH 140
Query: 380 CV 381
C+
Sbjct: 141 CI 142
>gi|258542352|ref|YP_003187785.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-01]
gi|384042273|ref|YP_005481017.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-12]
gi|384050790|ref|YP_005477853.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-03]
gi|384053898|ref|YP_005486992.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-07]
gi|384057132|ref|YP_005489799.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-22]
gi|384059773|ref|YP_005498901.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-26]
gi|384063065|ref|YP_005483707.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-32]
gi|384119141|ref|YP_005501765.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-01-42C]
gi|421849726|ref|ZP_16282701.1| DNA helicase RecQ [Acetobacter pasteurianus NBRC 101655]
gi|256633430|dbj|BAH99405.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-01]
gi|256636489|dbj|BAI02458.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-03]
gi|256639542|dbj|BAI05504.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-07]
gi|256642598|dbj|BAI08553.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-22]
gi|256645653|dbj|BAI11601.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-26]
gi|256648706|dbj|BAI14647.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-32]
gi|256651759|dbj|BAI17693.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654750|dbj|BAI20677.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-12]
gi|371459457|dbj|GAB27904.1| DNA helicase RecQ [Acetobacter pasteurianus NBRC 101655]
Length = 626
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 87/226 (38%), Gaps = 82/226 (36%)
Query: 177 VSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKA 236
+ T S S+ S S L D G E LQA +FG FR LQ QA +
Sbjct: 2 IETGSISTPSQFSHSRLERDRFAGKPPQEVLQA----------VFGFPGFRSLQAQAVEC 51
Query: 237 SVAKQDCFVLLPTGGGKSLCYQ---------------------DQIITLNLKFGIPATFL 275
+ +D VL+PTGGGKS+CYQ DQ+ L + GI A L
Sbjct: 52 VMEGRDTLVLMPTGGGKSVCYQIPALCREGMGLVISPLIALMDDQVAGLR-QLGINAAAL 110
Query: 276 NSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQ 335
+S+ +AA + +L G + LLY++PER++ +
Sbjct: 111 HSELEGDEAAKIRSDLANGRI-------------------------DLLYISPERLLSSG 145
Query: 336 SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ +++ I L V+ +DEAHC+
Sbjct: 146 TLDRLVR-------IPLSVIA------------------IDEAHCI 166
>gi|319643550|ref|ZP_07998171.1| ATP-dependent DNA helicase [Bacteroides sp. 3_1_40A]
gi|345518434|ref|ZP_08797885.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|254835825|gb|EET16134.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|317384814|gb|EFV65772.1| ATP-dependent DNA helicase [Bacteroides sp. 3_1_40A]
Length = 605
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 73/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + + ++D VL+PTGGGKS+CYQ D
Sbjct: 9 FGYDSFRPLQQDIIQNILVQKDTLVLMPTGGGKSICYQLPALLMEGTAIVVSPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L GI A LNS ++ + +E QG +
Sbjct: 69 QVESLQAN-GIAARALNSSNNETENINLRRECLQGKI----------------------- 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PER++ +F L D+ Q++ F +DEAH
Sbjct: 105 --KLLYISPERLLIETNF-----------------LLKDI---------QISLFAIDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|423239789|ref|ZP_17220905.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
gi|392645829|gb|EIY39552.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
Length = 605
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 73/182 (40%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + + ++D VL+PTGGGKS+CYQ D
Sbjct: 9 FGYDSFRPLQQDIIQNILTQKDTLVLMPTGGGKSICYQLPALLMEGTAIVVSPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L GI A LNS ++ + +E QG +
Sbjct: 69 QVESLQAN-GIAARALNSSNNETENINLRRECLQGKI----------------------- 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PER++ +F L D+ Q++ F +DEAH
Sbjct: 105 --KLLYISPERLLIETNF-----------------LLKDI---------QISLFAIDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|94264239|ref|ZP_01288034.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[delta proteobacterium MLMS-1]
gi|93455350|gb|EAT05554.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[delta proteobacterium MLMS-1]
Length = 605
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 67/183 (36%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG +FRP Q + + + D FVL+PTGGGKSLCYQ
Sbjct: 11 VFGYDSFRPQQQEIVERLLGGGDAFVLMPTGGGKSLCYQLPALHRPGLAVVVSPLISLMK 70
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+ A F NS +A VL + G
Sbjct: 71 DQVDALRAN-GVRAAFYNSALGADEARRVLARMHDG------------------------ 105
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER+ L +D L Q +LA F +DEA
Sbjct: 106 -QLDLLYVAPERL-----------------------LHSD--FLGRLGQLKLALFAIDEA 139
Query: 379 HCV 381
HC+
Sbjct: 140 HCI 142
>gi|443900420|dbj|GAC77746.1| ATP-dependent DNA helicase [Pseudozyma antarctica T-34]
Length = 800
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 48/186 (25%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F +FR Q A++ + V++PTGGGKSLCYQ
Sbjct: 118 VFRIPSFRFCQEAVINAAMDARHAVVVMPTGGGKSLCYQLPAILNPGVTLVVSPLISLMT 177
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVL---SQHYFLHQLIFV-LTCAS 314
DQ++ L + GI + L + + A+L+++R G L S+H + L
Sbjct: 178 DQVLHLK-EVGIESELLCGSTSREDSTAILKKIRHGPALAGPSKHANSNASASSELLEDH 236
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
R D KLLYVTPERI +++F L+ + +G +L+ V
Sbjct: 237 RTD--GIKLLYVTPERIAKSKTFLSALQNAYEQG--------------------RLSRIV 274
Query: 375 VDEAHC 380
+DEAHC
Sbjct: 275 IDEAHC 280
>gi|300868275|ref|ZP_07112904.1| ATP-dependent DNA helicase [Oscillatoria sp. PCC 6506]
gi|300333710|emb|CBN58088.1| ATP-dependent DNA helicase [Oscillatoria sp. PCC 6506]
Length = 726
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 40/168 (23%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG +FRP Q + +A+++K+D +++PTGGGKSLC+Q + LK G+
Sbjct: 23 FGYDSFRPGQREIVEAALSKRDMLIVMPTGGGKSLCFQ---LPALLKPGLTV-------V 72
Query: 281 VSQAAAVLQE----LRQGLVLSQHYFLHQLIFVLTCASRKDK---PSCKLLYVTPERIVG 333
VS A++Q+ LR + + FL+ + ++ SR+ KLLYV PER++
Sbjct: 73 VSPLIALMQDQVESLRDNGIGAT--FLNSTLSLMETRSRETAILDGKIKLLYVAPERLLS 130
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ + + G ++ F +DEAHCV
Sbjct: 131 ERFLPFLDQVAASLG---------------------ISAFAIDEAHCV 157
>gi|323494185|ref|ZP_08099300.1| ATP-dependent DNA helicase RecQ [Vibrio brasiliensis LMG 20546]
gi|323311579|gb|EGA64728.1| ATP-dependent DNA helicase RecQ [Vibrio brasiliensis LMG 20546]
Length = 612
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 36/165 (21%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIIT---LNLKFGIPATFLN 276
+FG ++FR Q + A+VA QD V++PTGGGKSLCYQ + L L + +
Sbjct: 24 VFGYQSFRDGQQEVIDAAVAGQDSLVIMPTGGGKSLCYQIPALVRSGLTLVISPLISLMK 83
Query: 277 SQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQS 336
Q +A V E + + +++ +R + KL+YV+PER++ +
Sbjct: 84 DQVDQLKANGVAAECINSTMPREE--------LISVYNRMNSGVIKLVYVSPERVL-MRD 134
Query: 337 FSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F E L+ L L+ VDEAHC+
Sbjct: 135 FIERLEGL------------------------PLSMIAVDEAHCI 155
>gi|281420257|ref|ZP_06251256.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
gi|281405752|gb|EFB36432.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
Length = 620
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 72/182 (39%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q K + DC VL+PTGGGKSLCYQ D
Sbjct: 11 FGYDSFRPNQEAIIKEVMQGHDCLVLMPTGGGKSLCYQVPALAMEGTAVVISPLISLMHD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GIPA LNS + +LI C +K
Sbjct: 71 QVEALKAN-GIPAEALNSGNDTTD---------------------ELIIRRRC----EKG 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV+PE+++ SE+ L +++ +++ F VDEAH
Sbjct: 105 ELKLLYVSPEKLI-----SEI------------PYLFSNI---------KISLFAVDEAH 138
Query: 380 CV 381
C+
Sbjct: 139 CI 140
>gi|359454206|ref|ZP_09243496.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20495]
gi|414070221|ref|ZP_11406208.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. Bsw20308]
gi|358048729|dbj|GAA79745.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20495]
gi|410807319|gb|EKS13298.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. Bsw20308]
Length = 607
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 70/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q A++ D VLLPTGGGKS+CY Q
Sbjct: 22 VFGYSEFRDGQKAVIDAAINGHDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+ A ++N+ + V Q+L QGL+
Sbjct: 82 DQVTQLQ-ALGVKAAYVNNSLAREEQQLVYQQLHQGLI---------------------- 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PE+++ + F E L L+ ++ F +DEA
Sbjct: 119 ---KLLYVAPEKVL-QRDFLERLSHLN------------------------VSLFAIDEA 150
Query: 379 HCV 381
HCV
Sbjct: 151 HCV 153
>gi|296105298|ref|YP_003615444.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059757|gb|ADF64495.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 630
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 54/132 (40%), Gaps = 45/132 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q + + +DC V++PTGGGKSLCYQ + LN
Sbjct: 42 FGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLMKD 101
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS QT Q V+ R G V
Sbjct: 102 QVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQV------------------------ 137
Query: 321 CKLLYVTPERIV 332
+LLY+ PER++
Sbjct: 138 -RLLYIAPERLM 148
>gi|219870290|ref|YP_002474665.1| ATP-dependent DNA helicase RecQ, superfamily II [Haemophilus
parasuis SH0165]
gi|219690494|gb|ACL31717.1| ATP-dependent DNA helicase RecQ, superfamily II [Haemophilus
parasuis SH0165]
Length = 609
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG ++FR Q + +A ++ +DC V++ TGGGKSLCYQ
Sbjct: 16 VFGYQSFRQGQSEVIEAILSGKDCLVIMTTGGGKSLCYQVPALCFEGITLVISPLISLMK 75
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L L G+ A ++NS QT+ + AV Q+ G
Sbjct: 76 DQVDQL-LTNGVEAGYINSTQTIEEQQAVEQKAISG------------------------ 110
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLY++PE+++ + F + C +++ VDEA
Sbjct: 111 -QLKLLYLSPEKVMTSNFFQFISLC-------------------------KISLIAVDEA 144
Query: 379 HCV 381
HCV
Sbjct: 145 HCV 147
>gi|329960081|ref|ZP_08298545.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
gi|328533033|gb|EGF59806.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
Length = 603
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + + +A++D VL+PTGGGKS+CYQ D
Sbjct: 9 FGYDSFRPLQEEIIRHLLARKDALVLMPTGGGKSICYQLPALLCEGTAVVVSPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L + GI A LNS + AA+ + +G
Sbjct: 69 QVESL-VANGIAAGALNSNNDETANAALRRACTEG------------------------- 102
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ ++ +L+ +H ++ F +DEAH
Sbjct: 103 KLKLLYISPEKLLAEANY--LLRDMH------------------------ISLFAIDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|189196824|ref|XP_001934750.1| ATP-dependent DNA helicase recQ [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187980629|gb|EDU47255.1| ATP-dependent DNA helicase recQ [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 490
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 35/178 (19%)
Query: 212 DMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQII----TLNLK 267
+++F +F +FRPLQ + A++ +D F+ T GKSLCYQ + TL +
Sbjct: 11 NLDFTLRKVFKKASFRPLQREVVMATLDGEDVFLQAATSFGKSLCYQLPAVVDFGTLTSQ 70
Query: 268 FGIPAT----FLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKL 323
I + +N+Q + A + E L ++I L C P +L
Sbjct: 71 VTIVISPLLALMNNQVASMRNANIRVETINSTTLPAD--RTRIIADLQCG----HPLTRL 124
Query: 324 LYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
LYVTPE G+ +F ++L+ +H QR+LA VDEAHCV
Sbjct: 125 LYVTPEFCQGD-NFRKILRIIH--------------------SQRELARIAVDEAHCV 161
>gi|358398791|gb|EHK48142.1| hypothetical protein TRIATDRAFT_262699 [Trichoderma atroviride IMI
206040]
Length = 1621
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 29/167 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATF 274
F + FR Q +A A++A +D FVL+PTGGGKSLCYQ ++ G+ P
Sbjct: 752 FRMKGFRHNQLEAINATLAGEDAFVLMPTGGGKSLCYQLPAVVKSGRTRGVTIVISPLLS 811
Query: 275 LNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGN 334
L Q A +Q + S Y Q++ R + +LLY+TPE +
Sbjct: 812 LMQDQVDHMKALGIQAVAFNSECSAEY-KRQVMSAFN--ERNPEHFIELLYITPEMASNS 868
Query: 335 QSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F + L++K ++ A FV+DEAHCV
Sbjct: 869 VQFLNAMVNLYQK--------------------QKFARFVIDEAHCV 895
>gi|255557667|ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative [Ricinus communis]
Length = 714
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 96/246 (39%), Gaps = 70/246 (28%)
Query: 157 QIFTPSSVKHSSKSVDCKSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFA 216
Q+ K + + + K+ + T S+S+ S + + + + FE D +F
Sbjct: 31 QVLLERQEKLNERKSELKAILETCSSSTRRGAPSSPTTASDINWSGPFEWDAQADRDKFH 90
Query: 217 NVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY------------------- 257
+FG ++RP Q + A ++ +D V++ GGGKSLCY
Sbjct: 91 ---VFGITSYRPNQREIVNAVMSGRDVLVIMAAGGGKSLCYQLPAILRDGVSLVISPLIS 147
Query: 258 --QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASR 315
QDQ++ L GIPA L S + + + L +G
Sbjct: 148 LIQDQVMGLK-ALGIPAYKLTSTTSKEDEKFIYKALEKG--------------------- 185
Query: 316 KDKPSCKLLYVTPERIVGNQSF-SEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
+ K+LYVTPE++ ++ F S++ KC HR L+
Sbjct: 186 --EEMLKILYVTPEKVSKSKRFMSKLEKCHHRG---------------------HLSIIA 222
Query: 375 VDEAHC 380
+DEAHC
Sbjct: 223 IDEAHC 228
>gi|115526900|ref|YP_783811.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris BisA53]
gi|115520847|gb|ABJ08831.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris BisA53]
Length = 617
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 69/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR Q + + DC VL+PTGGGKSLCYQ
Sbjct: 23 VFGLPGFRGNQEKIVTHVASGGDCLVLMPTGGGKSLCYQLPSLLREGCGIVVSPLIALMR 82
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L L+ G+ A LNS + +A AV Q+L G
Sbjct: 83 DQVAGL-LEAGVRAAVLNSTLSYQEANAVEQQLLDG------------------------ 117
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER++ + S + + +LA F +DEA
Sbjct: 118 -ELDLLYVAPERLLTPRCLSLLARA-------------------------KLALFAIDEA 151
Query: 379 HCV 381
HCV
Sbjct: 152 HCV 154
>gi|121592519|ref|YP_984415.1| ATP-dependent DNA helicase RecQ [Acidovorax sp. JS42]
gi|120604599|gb|ABM40339.1| ATP-dependent DNA helicase RecQ [Acidovorax sp. JS42]
Length = 623
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 69/187 (36%), Gaps = 72/187 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR Q +A D VL+PTGGGKSLCYQ
Sbjct: 11 VFGYEQFRGPQQAIIDHVIAGGDALVLMPTGGGKSLCYQVPAIVRRDAGLGVTVVVSPLI 70
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L+ + G+ A FLNS Q V + L +G +
Sbjct: 71 ALMHDQVGALH-EAGVEAAFLNSTLDWQQTQDVERRLARGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLY PER+ ++ F +L LH +G QL F
Sbjct: 112 -------TLLYAAPERVTTDR-FLTLLDGLHARG--------------------QLGLFA 143
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 144 IDEAHCV 150
>gi|403215321|emb|CCK69820.1| hypothetical protein KNAG_0D00680 [Kazachstania naganishii CBS
8797]
Length = 881
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 72/196 (36%), Gaps = 71/196 (36%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------ 258
D++ + F + FRP Q A + ++ +D FVL+PTGGGKSLCYQ
Sbjct: 218 DELYYHLQATFKLKGFRPNQLTAINSVLSGKDVFVLMPTGGGKSLCYQLPALVKSGETRG 277
Query: 259 -------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQ 305
DQ+ L L I A NS+ + +Q V L G
Sbjct: 278 TTVVISPLISLMQDQVEHL-LDLNIRACMFNSKNSAAQRNEVFNLLING----------- 325
Query: 306 LIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
L+Y++PE I + L L++
Sbjct: 326 --------------DLDLIYMSPEMIKASAQCQRALGTLYKN------------------ 353
Query: 366 CQRQLAGFVVDEAHCV 381
RQLA V+DEAHCV
Sbjct: 354 --RQLARIVIDEAHCV 367
>gi|427413377|ref|ZP_18903569.1| ATP-dependent DNA helicase RecQ [Veillonella ratti ACS-216-V-Col6b]
gi|425716193|gb|EKU79179.1| ATP-dependent DNA helicase RecQ [Veillonella ratti ACS-216-V-Col6b]
Length = 616
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 73/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
FG +FRP Q + +A +D ++PTG GKS+C+ QD
Sbjct: 14 FGYTSFRPAQEVPVASLLANKDVLAIMPTGAGKSICFQIPAILKRGLTIVFSPLISLMQD 73
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L ++ IPA +LNS Q ++ V++ LR G V
Sbjct: 74 QVDGLRMQ-KIPAAYLNSSQDKDESINVMRALRAGRV----------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
K+LY+ PER+ G++ F LK L D V ++DEAH
Sbjct: 110 --KILYLAPERL-GSEWFRNF-----------LKELPIDQV-------------IIDEAH 142
Query: 380 CV 381
CV
Sbjct: 143 CV 144
>gi|390950434|ref|YP_006414193.1| ATP-dependent DNA helicase RecQ [Thiocystis violascens DSM 198]
gi|390427003|gb|AFL74068.1| ATP-dependent DNA helicase RecQ [Thiocystis violascens DSM 198]
Length = 743
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 71/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q + + D VL+PTGGGKSLCY Q
Sbjct: 17 VFGFDRFRGAQAEIIDLVIDGGDALVLMPTGGGKSLCYQIPALLRPGTGIVVSPLIALMQ 76
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A FLNS T +A AV Q L+ G
Sbjct: 77 DQVDALT-QLGVRAAFLNSSLTPDKARAVEQALQAG------------------------ 111
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
S LLYV PER++ + F ++L R+ V A F +DEA
Sbjct: 112 -SLDLLYVAPERLL-TERFEDLLD--------RIPV----------------ALFAIDEA 145
Query: 379 HCV 381
HCV
Sbjct: 146 HCV 148
>gi|71017581|ref|XP_759021.1| hypothetical protein UM02874.1 [Ustilago maydis 521]
gi|46098743|gb|EAK83976.1| hypothetical protein UM02874.1 [Ustilago maydis 521]
Length = 1291
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 77/174 (44%), Gaps = 43/174 (24%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQ 279
F + FR Q +A +++ +D FVL+PTGGGKSLCYQ +PA +
Sbjct: 410 FFKLKRFRRNQLEAINGTLSGRDVFVLMPTGGGKSLCYQ-----------LPACIDTDKA 458
Query: 280 T-VSQAAAVLQELRQGLVL---SQHYFLHQLIFVLTCASRKDK--------PSCKLLYVT 327
T VS + L L + VL + +L ++ R+D S +LLYVT
Sbjct: 459 TGVSIVISPLLSLIEDQVLDLVRKDVPAVKLTGDMSANDRRDAFNTARDRVGSLRLLYVT 518
Query: 328 PERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
PE I + E+L L+ Q++LA VVDEAHCV
Sbjct: 519 PEFIRQSNQAMELLDLLY--------------------SQKRLARIVVDEAHCV 552
>gi|427416527|ref|ZP_18906710.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7375]
gi|425759240|gb|EKV00093.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7375]
Length = 736
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 76/196 (38%), Gaps = 68/196 (34%)
Query: 207 LQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY--------- 257
+ + +E A FG FR Q + + QD V++PTGGGKSLCY
Sbjct: 7 IASFPSLEAALKHFFGYDDFRHYQRAIIEQVLKNQDVLVIMPTGGGKSLCYQLPALLRLG 66
Query: 258 ------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQ 305
QDQ+ +L GI ATFLNS T ++ Q L +G
Sbjct: 67 VTIVVSPLIALMQDQVRSLE-DNGIAATFLNSSLTFNEVRDREQALLRG----------- 114
Query: 306 LIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHT 365
KLLY+ PER++ N SF +L+ + +
Sbjct: 115 --------------DIKLLYLAPERLM-NPSFWPLLEQIQQTVG---------------- 143
Query: 366 CQRQLAGFVVDEAHCV 381
L+ F +DEAHCV
Sbjct: 144 ----LSAFAIDEAHCV 155
>gi|255536292|ref|YP_003096663.1| ATP-dependent DNA helicase, RecQ family [Flavobacteriaceae
bacterium 3519-10]
gi|255342488|gb|ACU08601.1| ATP-dependent DNA helicase, RecQ family [Flavobacteriaceae
bacterium 3519-10]
Length = 655
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 80/211 (37%), Gaps = 82/211 (38%)
Query: 192 SLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGG 251
S+IS + L F+ LQ +G+ FR Q + A +A +D LLPTGG
Sbjct: 15 SMISPQDFHALKFQTLQHF----------WGHSTFRDSQEEIINAVIAGKDTLALLPTGG 64
Query: 252 GKSLCYQ---------------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQE 290
GKSLCYQ DQ+ L GI A +L+S+ A +
Sbjct: 65 GKSLCYQLPAIILDGICLVISPLLALMKDQVYHLKNN-GIEAEYLSSELDEFDAETIFNR 123
Query: 291 LRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSI 350
R+G+ KLLY++PER+ N+ F + L+ +
Sbjct: 124 CREGI-------------------------TKLLYISPERLT-NRMFLQNLEVI------ 151
Query: 351 RLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+L+ VDEAHC+
Sbjct: 152 ------------------KLSFIAVDEAHCI 164
>gi|298490702|ref|YP_003720879.1| ATP-dependent DNA helicase RecQ ['Nostoc azollae' 0708]
gi|298232620|gb|ADI63756.1| ATP-dependent DNA helicase RecQ ['Nostoc azollae' 0708]
Length = 722
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 40/168 (23%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FRP Q Q + ++ +D V++PTGGGKSLC+Q + LK G+
Sbjct: 15 FGYDQFRPGQRQIIEDALQNRDLMVVMPTGGGKSLCFQ---LPALLKSGLTV-------V 64
Query: 281 VSQAAAVLQE----LRQGLVLSQHYFLHQLIFVLTCASRKD---KPSCKLLYVTPERIVG 333
VS A++Q+ LR + + FL+ + SR++ +LLY+ PER++
Sbjct: 65 VSPLIALMQDQVEALRNNNISAT--FLNSSLNFYKVRSREEAIMNGKVRLLYIAPERLIS 122
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
++ F +L + K I A F +DEAHCV
Sbjct: 123 DK-FLPLLDVVKEKIGI--------------------ANFAIDEAHCV 149
>gi|410080512|ref|XP_003957836.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
gi|372464423|emb|CCF58701.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
Length = 873
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 29/166 (17%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFG---IPATFL 275
+F FR Q A A+++ D F+L+PTGGGKSLCYQ II + G + + +
Sbjct: 227 VFKLPNFRSDQLSAINATLSGDDVFILMPTGGGKSLCYQLPSIIRSGVTCGTTIVISPLI 286
Query: 276 NSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQ 335
+ Q Q +LQ + +S Q F + + D LLY++PE + ++
Sbjct: 287 SLMQ--DQIDHLLQLNIKACSISSKLSTSQRNFYFSLFANGD---LDLLYISPEMLTASK 341
Query: 336 SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F L LH+ R+LA VDEAHC+
Sbjct: 342 KFKTTLDKLHK--------------------SRKLARIAVDEAHCL 367
>gi|340522439|gb|EGR52672.1| hypothetical protein TRIREDRAFT_102458 [Trichoderma reesei QM6a]
Length = 1690
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 71/167 (42%), Gaps = 29/167 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGI-----PATF 274
F + FR Q +A A++A D FVL+PTGGGKSLCYQ ++ G+ P
Sbjct: 804 FRMKGFRQNQLEAINATLAGDDAFVLMPTGGGKSLCYQLPAVVKSGKTRGVTIVVSPLLS 863
Query: 275 LNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGN 334
L Q A +Q + S Y Q++ R + +LLYVTPE +
Sbjct: 864 LMQDQVDHMKALGIQAVAFNSECSPEY-KRQVMSAFD--ERNPEHFIELLYVTPEMASKS 920
Query: 335 QSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F L+ L+R ++ A V+DEAHCV
Sbjct: 921 PQFMNALQNLYRN--------------------KKFARIVIDEAHCV 947
>gi|444376043|ref|ZP_21175292.1| ATP-dependent DNA helicase RecQ [Enterovibrio sp. AK16]
gi|443679814|gb|ELT86465.1| ATP-dependent DNA helicase RecQ [Enterovibrio sp. AK16]
Length = 616
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 72/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG ++R Q + ++V +D V++PTGGGKSLCYQ
Sbjct: 23 VFGYHSYRDGQKEIIDSAVGGRDSLVIMPTGGGKSLCYQIPALVRDGLTIVISPLISLMK 82
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L L G+ A LNS + +A Q LR G
Sbjct: 83 DQVDQL-LANGVQAACLNSSMNPDEQSATWQSLRNG------------------------ 117
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
S KLLYV+PERI+ + F E L+ ++ L VDEA
Sbjct: 118 -SLKLLYVSPERIL-MRDFIERLQSVN------------------------LGLIAVDEA 151
Query: 379 HCV 381
HC+
Sbjct: 152 HCI 154
>gi|339048395|ref|ZP_08647333.1| ATP-dependent DNA helicase RecQ [gamma proteobacterium IMCC2047]
gi|330722396|gb|EGH00243.1| ATP-dependent DNA helicase RecQ [gamma proteobacterium IMCC2047]
Length = 266
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 71/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------QD 259
+G AFR Q A++ DC VL+PTGGGKSLCY QD
Sbjct: 15 YGYEAFRGQQADIISAALEGDDCMVLMPTGGGKSLCYQLPALLRDGLGIVVSPLIALMQD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + GI A +LNS ++ + + ++LR+G
Sbjct: 75 QVNALQ-QLGINAAYLNSTLSLEEQQQINKQLRKG------------------------- 108
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ +LY+ PER++ +S L R+ I L +DEAH
Sbjct: 109 TIDILYIAPERLIQERSLQ-----LLRQLKISL--------------------IAIDEAH 143
Query: 380 CV 381
CV
Sbjct: 144 CV 145
>gi|149374800|ref|ZP_01892573.1| ATP-dependent DNA helicase RecQ [Marinobacter algicola DG893]
gi|149360689|gb|EDM49140.1| ATP-dependent DNA helicase RecQ [Marinobacter algicola DG893]
Length = 637
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 65/183 (35%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FRPLQ + V D VL+PTGGGKSLCY Q
Sbjct: 44 VFGYETFRPLQGDIIRELVNGGDALVLMPTGGGKSLCYQVPALVRAGTAIVISPLIALMQ 103
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A FLNS QA L G
Sbjct: 104 DQVAALK-ELGVKAAFLNSTMDFEQARDTENALMTG------------------------ 138
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLY PER++ ++ L LH SI L F +DEA
Sbjct: 139 -ELDLLYCAPERLIQPRT----LDLLHH-ASISL--------------------FAIDEA 172
Query: 379 HCV 381
HCV
Sbjct: 173 HCV 175
>gi|365851455|ref|ZP_09391888.1| ATP-dependent DNA helicase RecQ [Lactobacillus parafarraginis
F0439]
gi|363716753|gb|EHM00148.1| ATP-dependent DNA helicase RecQ [Lactobacillus parafarraginis
F0439]
Length = 592
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 70/182 (38%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRP Q +A ++ ++PTGGGKSLCYQ D
Sbjct: 11 FGYADFRPGQQAVIDDILAHKNVLTIMPTGGGKSLCYQIPALMLDGLTLVISPLIALMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN GIPATF+NS Q L + R G V
Sbjct: 71 QVDALN-DSGIPATFVNSTLDFQQIDERLAQARHGDV----------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV+PER+ + +FS+ L L D+V VDEAH
Sbjct: 107 --KLLYVSPERL-DSGAFSQ------------LAALPIDLV-------------AVDEAH 138
Query: 380 CV 381
C+
Sbjct: 139 CI 140
>gi|207342194|gb|EDZ70032.1| YMR190Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 952
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+F FRP Q +A A++ +D FVL+PTGGGKSLCY
Sbjct: 673 VFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSGKTHGTTIVISPLI 732
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L I A+ +S+ T Q RQ L F++ L+
Sbjct: 733 SLMQDQVEHL-LNKNIKASMFSSRGTAEQR-------RQTFNL----FINGLL------- 773
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
L+Y++PE I ++ + L+ G +LA V
Sbjct: 774 -------DLVYISPEMISASEQCKRAISRLYADG--------------------KLARIV 806
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 807 VDEAHCV 813
>gi|392981231|ref|YP_006479819.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392327164|gb|AFM62117.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 609
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 54/132 (40%), Gaps = 45/132 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q + + +DC V++PTGGGKSLCYQ + LN
Sbjct: 21 FGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLMKD 80
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS QT Q V+ R G +
Sbjct: 81 QVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQI------------------------ 116
Query: 321 CKLLYVTPERIV 332
+LLY+ PER++
Sbjct: 117 -RLLYIAPERLM 127
>gi|351704749|gb|EHB07668.1| ATP-dependent DNA helicase Q1 [Heterocephalus glaber]
Length = 677
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 72/182 (39%), Gaps = 65/182 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F + FRPLQ + ++A ++ F+++PTGGGKSLCYQ
Sbjct: 121 VFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLME 180
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + GI AT LN+ + V E+ ++ K
Sbjct: 181 DQLMVLK-QLGISATMLNASSSKEHVKWVHAEM---------------------VNKNSK 218
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YVTPE+I ++ F L+ + R+ VDE
Sbjct: 219 --LKLIYVTPEKIAKSKMFMSRLEKAYE--------------------ARRFTRIAVDEV 256
Query: 379 HC 380
HC
Sbjct: 257 HC 258
>gi|442610453|ref|ZP_21025175.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441747975|emb|CCQ11237.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 611
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 69/171 (40%), Gaps = 48/171 (28%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQ 279
+FG R FR Q A++ QD VLLPTGGGKSLCYQ +PA L
Sbjct: 24 VFGYRDFRDGQEAVINAALRGQDALVLLPTGGGKSLCYQ-----------VPALALPG-- 70
Query: 280 TVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK---------PSCKLLYVTPER 330
V+ + L L Q V FV SR+D+ KLLYV PE+
Sbjct: 71 -VTVVISPLISLMQDQVAQLQALGVSAEFVNNSVSREDQIDIYRRLHDGEIKLLYVAPEK 129
Query: 331 IVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
++ + F E L L+ + F +DEAHCV
Sbjct: 130 VL-QREFLERLSHLN------------------------IGLFAIDEAHCV 155
>gi|350565839|ref|ZP_08934569.1| ATP-dependent helicase RecQ [Peptoniphilus indolicus ATCC 29427]
gi|348663378|gb|EGY79961.1| ATP-dependent helicase RecQ [Peptoniphilus indolicus ATCC 29427]
Length = 711
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q + +D +LPTGGGKS+CYQ D
Sbjct: 11 FGYDNFRSGQEDLINNILNGKDVLGVLPTGGGKSICYQIPAMLIDGLTIFISPLIALMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L LK GIPA +NS Q +Q V E+ G
Sbjct: 71 QVDDLRLK-GIPARLMNSSQDFTQTGEVKNEIENG------------------------- 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+ KLLY+ PER+ N F++ K L+ ++ VVDEAH
Sbjct: 105 NIKLLYIAPERL-ENVFFTQWAKNLN------------------------ISQIVVDEAH 139
Query: 380 CV 381
C+
Sbjct: 140 CI 141
>gi|354721299|ref|ZP_09035514.1| ATP-dependent DNA helicase RecQ [Enterobacter mori LMG 25706]
Length = 609
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 54/132 (40%), Gaps = 45/132 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q + + +DC V++PTGGGKSLCYQ + LN
Sbjct: 21 FGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLMKD 80
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS QT Q V+ R G +
Sbjct: 81 QVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQI------------------------ 116
Query: 321 CKLLYVTPERIV 332
+LLY+ PER++
Sbjct: 117 -RLLYIAPERLM 127
>gi|224074554|ref|XP_002304389.1| predicted protein [Populus trichocarpa]
gi|222841821|gb|EEE79368.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 71/224 (31%)
Query: 178 STSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKAS 237
S + S+ N RSS + D + SFE DD+ IFG ++R Q + A
Sbjct: 52 SGTGNSANENASRSSSLED---WSGSFEWDSQADDVRLN---IFGIPSYRQNQKEIINAI 105
Query: 238 VAKQDCFVLLPTGGGKSLCY---------------------QDQIITLNLKFGIPATFLN 276
++ +D V++ GGGKSLCY QDQ++ L GIPA L
Sbjct: 106 MSGRDVLVIMAAGGGKSLCYQLPAILRDGVALVISPLLSLIQDQVMGLT-ALGIPAFMLT 164
Query: 277 SQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQS 336
S + + + L +G + K+LYVTPE+I ++
Sbjct: 165 STTSKENEKFIYKALEKG-----------------------EGELKILYVTPEKISKSKR 201
Query: 337 FSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
F L+ H G RL +++ +DEAHC
Sbjct: 202 FMSKLEKCHNAG--RLSLIS------------------IDEAHC 225
>gi|383192105|ref|YP_005202233.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371590363|gb|AEX54093.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 610
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 74/192 (38%), Gaps = 75/192 (39%)
Query: 214 EFANVVI---FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------ 258
E A+ V+ FG + FRP Q +++ +DC V++PTGGGKSLCYQ
Sbjct: 11 ELAHQVLRDTFGYQQFRPGQQTIINTAISGRDCLVVMPTGGGKSLCYQIPALVMDGLTLV 70
Query: 259 ---------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
DQ+ L + G+ A LNS QT Q V+ R G +
Sbjct: 71 VSPLISLMKDQVDQL-MAAGVEAGCLNSTQTREQQLDVMAGCRAGRI------------- 116
Query: 310 LTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
K+LY+ PER++ F E L+ Q
Sbjct: 117 ------------KMLYIAPERLMMG-DFLEQLQ------------------------QWN 139
Query: 370 LAGFVVDEAHCV 381
A VDEAHC+
Sbjct: 140 PAMLAVDEAHCI 151
>gi|212710158|ref|ZP_03318286.1| hypothetical protein PROVALCAL_01212 [Providencia alcalifaciens DSM
30120]
gi|212687157|gb|EEB46685.1| hypothetical protein PROVALCAL_01212 [Providencia alcalifaciens DSM
30120]
Length = 608
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG ++FRP Q + +DC VL+PTGGGKSLCYQ D
Sbjct: 21 FGYQSFRPGQDAVIGGILDGRDCLVLMPTGGGKSLCYQVPALVKQGITLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS QT + ++++ QG +
Sbjct: 81 QVDQLKLH-GVEAACLNSSQTSLEQRQIMEQCTQGKI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ + F + L+ + D+ +L VDEAH
Sbjct: 117 --KLLYVAPERLLTD-YFIQQLE-------------SWDIALL-----------AVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|343506824|ref|ZP_08744288.1| ATP-dependent DNA helicase RecQ [Vibrio ichthyoenteri ATCC 700023]
gi|342801358|gb|EGU36830.1| ATP-dependent DNA helicase RecQ [Vibrio ichthyoenteri ATCC 700023]
Length = 612
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 36/165 (21%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIIT---LNLKFGIPATFLN 276
+FG + FR Q Q +A++ QD V++PTGGGKSLCYQ + L L + +
Sbjct: 24 VFGYQQFRSGQEQVIEAAIQGQDSLVIMPTGGGKSLCYQVPALVREGLTLVISPLISLMK 83
Query: 277 SQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQS 336
Q +A V E + + +++ +R + + KL+YV+PER++ +
Sbjct: 84 DQVDQLKADGVAAECVNSTMSRED--------LISVYNRMNSGALKLVYVSPERVL-MRD 134
Query: 337 FSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F E L+ L L+ VDEAHC+
Sbjct: 135 FIERLQGL------------------------SLSMIAVDEAHCI 155
>gi|186683728|ref|YP_001866924.1| ATP-dependent DNA helicase RecQ [Nostoc punctiforme PCC 73102]
gi|186466180|gb|ACC81981.1| ATP-dependent DNA helicase RecQ [Nostoc punctiforme PCC 73102]
Length = 719
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 36/166 (21%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FRP Q Q + ++ +D +++PTGGGKSLC+Q + +K G+
Sbjct: 15 FGYDRFRPGQRQIIEDALQNRDLLIVMPTGGGKSLCFQ---LPALIKKGLTV-------V 64
Query: 281 VSQAAAVLQELRQGLVLS--QHYFLHQLIFVLTCASRKD---KPSCKLLYVTPERIVGNQ 335
VS A++Q+ +GL + FL+ + SR++ +LLYV PER++ ++
Sbjct: 65 VSPLIALMQDQVEGLRNNNINATFLNSSLNPYKVRSREEAILSGKVRLLYVAPERLL-SE 123
Query: 336 SFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F L + K I A F +DEAHCV
Sbjct: 124 RFLPFLDLVKEKIGI--------------------AAFAIDEAHCV 149
>gi|449274903|gb|EMC83940.1| ATP-dependent DNA helicase Q1, partial [Columba livia]
Length = 656
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 94/240 (39%), Gaps = 81/240 (33%)
Query: 162 SSVKHSSKSVDCKSGVSTSSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIF 221
S +K SS V+ T +++ NKK + + ++ A F
Sbjct: 39 SLIKQSSGDVEASGSKETETSAEAWNKK----------------DFPWYEKIKTALQGKF 82
Query: 222 GNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------DQ 260
+ FR LQ + A++A +D F+++PTGGGKSLCYQ DQ
Sbjct: 83 KLQKFRSLQLETVNAAMAGKDIFLVMPTGGGKSLCYQLPAVCSDGFTLVICPLISLMEDQ 142
Query: 261 IITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
++ L + GI A LN+ + V E+ L+++ L
Sbjct: 143 LMVLE-QLGISAALLNASSSKEHVKWVHTEM-----LNRNSQL----------------- 179
Query: 321 CKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHC 380
KL+YVTPE+I ++ F L+ ++ G +LA VDE HC
Sbjct: 180 -KLVYVTPEKIAKSKMFMSKLEKAYQAG--------------------RLARIAVDEVHC 218
>gi|422019090|ref|ZP_16365640.1| ATP-dependent DNA helicase RecQ [Providencia alcalifaciens Dmel2]
gi|414103632|gb|EKT65206.1| ATP-dependent DNA helicase RecQ [Providencia alcalifaciens Dmel2]
Length = 608
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG ++FRP Q + +DC VL+PTGGGKSLCYQ D
Sbjct: 21 FGYQSFRPGQDAVIGGILDGRDCLVLMPTGGGKSLCYQVPALVKQGVTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS QT + ++++ QG +
Sbjct: 81 QVDQLKLH-GVEAACLNSSQTSLEQRQIMEQCTQGKI----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER++ + F + L+ + D+ +L VDEAH
Sbjct: 117 --KLLYVAPERLLTD-YFIQQLE-------------SWDIALL-----------AVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|401676992|ref|ZP_10808972.1| ATP-dependent DNA helicase RecQ [Enterobacter sp. SST3]
gi|400215746|gb|EJO46652.1| ATP-dependent DNA helicase RecQ [Enterobacter sp. SST3]
Length = 609
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 54/132 (40%), Gaps = 45/132 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q + + +DC V++PTGGGKSLCYQ + LN
Sbjct: 21 FGYQQFRPGQETIIETVLQGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLMKD 80
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS QT Q V+ R G +
Sbjct: 81 QVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQI------------------------ 116
Query: 321 CKLLYVTPERIV 332
+LLY+ PER++
Sbjct: 117 -RLLYIAPERLM 127
>gi|378581806|ref|ZP_09830449.1| ATP-dependent DNA helicase [Pantoea stewartii subsp. stewartii
DC283]
gi|377815544|gb|EHT98656.1| ATP-dependent DNA helicase [Pantoea stewartii subsp. stewartii
DC283]
Length = 608
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 69/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q ++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQAIINEALNGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS T Q V+ + R G V
Sbjct: 81 QVDQL-LANGVAAACLNSTMTREQQQNVMADCRNGRV----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PER++ + +F E L Q A VDEAH
Sbjct: 117 --KLLYIAPERLMMD-NFLESL------------------------AHWQPAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|300176399|emb|CBK23710.2| unnamed protein product [Blastocystis hominis]
Length = 755
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 50/179 (27%)
Query: 217 NVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLN 276
N +FG+ AFR Q + K + + F ++PTGGGKSLCYQ +PA L
Sbjct: 69 NKEVFGHNAFRSGQMEVMKTVLTGRSVFCIMPTGGGKSLCYQ-----------LPALLLP 117
Query: 277 S-QQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSC-------------K 322
VS +++Q+ +GL Q + + +T +S + PS K
Sbjct: 118 GITVVVSPLISLVQDQIRGL---QEAGVE--VGAMTGSSGGEVPSALWNSVRTRQFPRLK 172
Query: 323 LLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L+Y TPE++ ++S +L+ L G + L FV+DE HC+
Sbjct: 173 LVYTTPEKLNKSESMKNLLRALSSLGFLSL--------------------FVIDEVHCM 211
>gi|228997737|ref|ZP_04157342.1| ATP-dependent DNA helicase RecQ [Bacillus mycoides Rock3-17]
gi|229005275|ref|ZP_04162990.1| ATP-dependent DNA helicase RecQ [Bacillus mycoides Rock1-4]
gi|228755914|gb|EEM05244.1| ATP-dependent DNA helicase RecQ [Bacillus mycoides Rock1-4]
gi|228761979|gb|EEM10920.1| ATP-dependent DNA helicase RecQ [Bacillus mycoides Rock3-17]
Length = 705
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 47/132 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FR Q + K +A +D ++PTGGGKS+CYQ D
Sbjct: 13 FGYSSFRRGQDETIKNVLAGKDTVCIMPTGGGKSICYQIPALVFEGTTLVISPLISLMKD 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL ++ GI AT++NS ++++A +Q +QG HY
Sbjct: 73 QVDTL-VQNGISATYINSSISITEANQRIQLAKQG-----HY------------------ 108
Query: 320 SCKLLYVTPERI 331
KLLYV PER+
Sbjct: 109 --KLLYVAPERL 118
>gi|421746369|ref|ZP_16184170.1| ATP-dependent DNA helicase RecQ [Cupriavidus necator HPC(L)]
gi|409775096|gb|EKN56626.1| ATP-dependent DNA helicase RecQ [Cupriavidus necator HPC(L)]
Length = 619
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 72/187 (38%), Gaps = 76/187 (40%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+FG AFR Q + + DC VL+PTGGGKSLCY
Sbjct: 11 VFGYHAFRGRQAEIIEHVAEGGDCLVLMPTGGGKSLCYQIPALLRQRAGHGVGIVVSPLI 70
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L + G+ A LNS T +QA+AV ++L G
Sbjct: 71 ALMQDQVAALT-EAGVRAAVLNSTLTGAQASAVERDLLAG-------------------- 109
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
++LYV PER++ F ++L + ++ F
Sbjct: 110 -----RLEILYVAPERLM-TPRFQDLLD------------------------RTRVGLFA 139
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 140 IDEAHCV 146
>gi|334126137|ref|ZP_08500116.1| ATP-dependent helicase RecQ [Enterobacter hormaechei ATCC 49162]
gi|333385797|gb|EGK57023.1| ATP-dependent helicase RecQ [Enterobacter hormaechei ATCC 49162]
Length = 630
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 54/132 (40%), Gaps = 45/132 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q + + +DC V++PTGGGKSLCYQ + LN
Sbjct: 42 FGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLMKD 101
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS QT Q V+ R G +
Sbjct: 102 QVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQI------------------------ 137
Query: 321 CKLLYVTPERIV 332
+LLY+ PER++
Sbjct: 138 -RLLYIAPERLM 148
>gi|320168360|gb|EFW45259.1| RECQL5 protein [Capsaspora owczarzaki ATCC 30864]
Length = 814
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 67/171 (39%), Gaps = 53/171 (30%)
Query: 226 FRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQTVSQAA 285
RP Q + KA + D F LPTG GKSLCY PA TVS+
Sbjct: 189 LRPPQRKPIKAIIDNADVFCCLPTGAGKSLCYM-----------FPAL------TVSRGI 231
Query: 286 AVLQELRQGLVLSQHYFLHQ-------LIFVLTCASRKDK--------PSCKLLYVTPER 330
++ L+ Q FLHQ L L +R + P +LLYVTPE
Sbjct: 232 TLVISPLIALMADQLKFLHQRNIPAHELHSALAPKTRAEIMADIVSPCPKTRLLYVTPE- 290
Query: 331 IVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+V + F VL+ +H G+ L VDEAHC+
Sbjct: 291 LVATERFRSVLRRIHANGN--------------------LVRMAVDEAHCI 321
>gi|71402467|ref|XP_804144.1| ATP-dependent DEAD/H DNA helicase recQ [Trypanosoma cruzi strain CL
Brener]
gi|70866957|gb|EAN82293.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
cruzi]
Length = 1310
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 82/219 (37%), Gaps = 67/219 (30%)
Query: 186 SNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFV 245
S + S+ I N S E D+ + +FG +R LQ + A + +D FV
Sbjct: 346 SPTRASAEIPVNSVNRYSGENFSWSADLRRTMIDVFGLHQYRFLQLEIMNACMDGRDAFV 405
Query: 246 LLPTGGGKSLCY-----------------------QDQIITLNLKFGIPATFLNSQQTVS 282
LLPTGGGKSLCY QDQ+ L + IPA L Q + +
Sbjct: 406 LLPTGGGKSLCYQLPALMPNPAQVTIVISPLISLIQDQVYAL-IANDIPAIALTGQTSDA 464
Query: 283 QAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLK 342
A+ E G + +H L+ YVTPE + F + L
Sbjct: 465 PRRALFAEWASGRI------VHTLV-----------------YVTPEYFGRSDHFVQCLV 501
Query: 343 CLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
L +G L+ FVVDEAHCV
Sbjct: 502 HLASRG--------------------LLSRFVVDEAHCV 520
>gi|452838315|gb|EME40256.1| hypothetical protein DOTSEDRAFT_179253 [Dothistroma septosporum
NZE10]
Length = 1189
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 29/167 (17%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ-DQIITLNLKFGIPATFLNSQQ 279
F + FR Q +A A++ +D FVL+PTGGGKSLCYQ +I G+
Sbjct: 301 FKLKGFRENQCEAINATLGGKDAFVLMPTGGGKSLCYQLPALIRGGKTRGVTVVI---SP 357
Query: 280 TVSQAAAVLQELR----QGLVLSQHYFLHQLIFVLTCASRKD-KPSCKLLYVTPERIVGN 334
+S +Q LR Q +++ + F+L D + LLYVTPE + +
Sbjct: 358 LLSLMEDQVQHLRNLNIQAFLINSETTKEERGFLLDSLKNPDVEKFITLLYVTPEMLSKS 417
Query: 335 QSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ + LH+ R+ A V+DEAHCV
Sbjct: 418 AAINNAFTRLHQ--------------------SRRFARLVIDEAHCV 444
>gi|373456060|ref|ZP_09547865.1| ATP-dependent DNA helicase RecQ [Dialister succinatiphilus YIT
11850]
gi|371934215|gb|EHO62019.1| ATP-dependent DNA helicase RecQ [Dialister succinatiphilus YIT
11850]
Length = 759
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 71/182 (39%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG AFRP Q + A V +D ++PTG GKS+C+Q D
Sbjct: 11 FGYDAFRPRQREVIDAIVKGEDVMAIMPTGAGKSICFQIPALLFPHGTIIISPLISLMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL + GIPA+F+NS ++ L+ L +G +
Sbjct: 71 QVETLTEQ-GIPASFVNSTIPYEESIERLRNLYRGKI----------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY+ PE++ S +CL Q L+ V+DEAH
Sbjct: 107 --KLLYMAPEKL----EPSYFTQCL---------------------AQVPLSMIVIDEAH 139
Query: 380 CV 381
CV
Sbjct: 140 CV 141
>gi|352106026|ref|ZP_08961137.1| ATP-dependent DNA helicase RecQ [Halomonas sp. HAL1]
gi|350598118|gb|EHA14242.1| ATP-dependent DNA helicase RecQ [Halomonas sp. HAL1]
Length = 608
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 69/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG +FR Q + +A D VL+PTGGGKSLCY Q
Sbjct: 16 VFGYDSFRGPQQAIIEHVIAGGDALVLMPTGGGKSLCYQIPALLREGTAIVVSPLIALMQ 75
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A +LNS +A + LR G
Sbjct: 76 DQVAALE-QNGVRAAYLNSSLDYHEAVEIENRLRAG------------------------ 110
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER+ + R+++L Q Q+A F +DEA
Sbjct: 111 -ELDLLYVAPERLA----------------TPRMQMLLE---------QNQIALFAIDEA 144
Query: 379 HCV 381
HCV
Sbjct: 145 HCV 147
>gi|198276249|ref|ZP_03208780.1| hypothetical protein BACPLE_02441 [Bacteroides plebeius DSM 17135]
gi|198270691|gb|EDY94961.1| ATP-dependent DNA helicase RecQ [Bacteroides plebeius DSM 17135]
Length = 611
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 71/182 (39%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + + K+D VL+PTGGGKS+CYQ D
Sbjct: 13 FGYTSFRPLQEKIISTILQKKDALVLMPTGGGKSMCYQLPALLMEGTTVVVSPLISLMKD 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L GI A LNS + A + E QG V
Sbjct: 73 QVESLQAN-GIVARALNSTNDDATNAQLYFECLQGRV----------------------- 108
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PER++ ++ L D+ ++ F +DEAH
Sbjct: 109 --KLLYISPERLMSEMNY-----------------LLRDI---------NISLFAIDEAH 140
Query: 380 CV 381
C+
Sbjct: 141 CI 142
>gi|332534725|ref|ZP_08410553.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035812|gb|EGI72296.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas haloplanktis
ANT/505]
Length = 596
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 67/183 (36%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q A++ QD VLLPTGGGKS+CY Q
Sbjct: 11 VFGYSEFRDGQKAVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 70
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+ A ++N+ + V Q+L QG +
Sbjct: 71 DQVTQLQ-ALGVKAAYVNNSLAREEQQLVYQQLHQGQI---------------------- 107
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PE K L R+ RL L + F +DEA
Sbjct: 108 ---KLLYVAPE------------KVLQREFLERLSHLNVSL-------------FAIDEA 139
Query: 379 HCV 381
HCV
Sbjct: 140 HCV 142
>gi|440794542|gb|ELR15702.1| ATPdependent DNA helicase, RecQ subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 621
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 66/209 (31%)
Query: 202 LSFEELQALDDMEFANV--------VIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGK 253
L+FE +Q + F +F + FRP Q + ++ +D FV++PTG GK
Sbjct: 99 LTFEAMQNWEAPGFPWADKVDHVLKTVFNHEQFRPNQRKVINCVLSGRDAFVIMPTGAGK 158
Query: 254 SLCY---------------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELR 292
SL Y QDQ+ L K G+ A L+S +T + + +L++
Sbjct: 159 SLLYQLPGVISNGFTLVISPLLSLIQDQVSALRKK-GVVAVELSSSRTPKEVSQMLKK-- 215
Query: 293 QGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRL 352
+H++ T A+ + K L+VTPER+V + F L+
Sbjct: 216 ------RHWY--------TNAALAKDTNVKFLFVTPERVVKSTRFFAFLR---------- 251
Query: 353 KVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
Q +LA V+DE HC+
Sbjct: 252 ----------QQVDQARLARVVIDECHCI 270
>gi|359395140|ref|ZP_09188193.1| ATP-dependent DNA helicase recQ [Halomonas boliviensis LC1]
gi|357972387|gb|EHJ94832.1| ATP-dependent DNA helicase recQ [Halomonas boliviensis LC1]
Length = 605
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 68/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q + +A D VL+PTGGGKSLCY Q
Sbjct: 16 VFGYDRFRGPQQAIIEHVIAGGDALVLMPTGGGKSLCYQIPALLREGTAIVVSPLIALMQ 75
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + G+ A +LNS +A V LR G
Sbjct: 76 DQVAALK-QNGVRADYLNSSLDYHEAVEVENRLRAG------------------------ 110
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLYV PER+ + RL++L Q Q+A F +DEA
Sbjct: 111 -ELDLLYVAPERLA----------------TARLQMLLE---------QTQIALFAIDEA 144
Query: 379 HCV 381
HCV
Sbjct: 145 HCV 147
>gi|228991633|ref|ZP_04151574.1| ATP-dependent DNA helicase RecQ [Bacillus pseudomycoides DSM 12442]
gi|228768071|gb|EEM16693.1| ATP-dependent DNA helicase RecQ [Bacillus pseudomycoides DSM 12442]
Length = 705
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 47/132 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FR Q + K +A +D ++PTGGGKS+CYQ D
Sbjct: 13 FGYSSFRRGQDETIKNVLAGKDTVCIMPTGGGKSICYQIPALVFEGTTLVISPLISLMKD 72
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ TL ++ GI AT++NS ++++A +Q +QG HY
Sbjct: 73 QVDTL-VQNGISATYINSSISITEANQRIQLAKQG-----HY------------------ 108
Query: 320 SCKLLYVTPERI 331
KLLYV PER+
Sbjct: 109 --KLLYVAPERL 118
>gi|403269130|ref|XP_003926609.1| PREDICTED: ATP-dependent DNA helicase Q1 [Saimiri boliviensis
boliviensis]
Length = 649
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 69/182 (37%), Gaps = 65/182 (35%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F + FRPLQ + ++A ++ F+++PTGGGKSLCYQ
Sbjct: 86 VFKLQKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPALCLDGFTLVICPLISLME 145
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ++ L + GI AT LN+ + V E+
Sbjct: 146 DQLMVLK-QLGISATMLNASSSKEHVKWVHAEMVN-----------------------KN 181
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KL+YVTPE+I ++ F L+ + R+ VDE
Sbjct: 182 SELKLIYVTPEKIAKSKMFMSRLEKAYEA--------------------RRFTRIAVDEV 221
Query: 379 HC 380
HC
Sbjct: 222 HC 223
>gi|88861126|ref|ZP_01135760.1| ATP-dependent DNA helicase [Pseudoalteromonas tunicata D2]
gi|88816848|gb|EAR26669.1| ATP-dependent DNA helicase [Pseudoalteromonas tunicata D2]
Length = 605
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 71/183 (38%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q A+ QD VL+PTGGGKSLCY Q
Sbjct: 20 VFGYDQFRTGQDLVITAATQGQDTLVLMPTGGGKSLCYQIPALALPGITIVVSPLISLMQ 79
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+ A LN T Q+ A+ Q+L G +
Sbjct: 80 DQVAQLK-ALGVSAECLNQSLTREQSMAIYQDLHAGKI---------------------- 116
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PER++ ++ ++ LH LP ++ F +DEA
Sbjct: 117 ---KLLYVAPERLL----LADFIERLHH---------------LP------VSLFAIDEA 148
Query: 379 HCV 381
HCV
Sbjct: 149 HCV 151
>gi|402492603|ref|ZP_10839363.1| ATP-dependent DNA helicase RecQ [Aquimarina agarilytica ZC1]
Length = 728
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 75/172 (43%), Gaps = 49/172 (28%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGIPATFLNSQQT 280
FG FR LQ Q K+ + K+D FV++PTGGGKSLCYQ +PA L S+ T
Sbjct: 14 FGFSQFRGLQEQVIKSLLKKEDTFVIMPTGGGKSLCYQ-----------LPA--LMSEGT 60
Query: 281 ---VSQAAAVLQELRQGL--VLSQHYFLHQL------IFVLTCASRKDKPSCKLLYVTPE 329
VS A+++ + + S++ H L V T + KLLYV PE
Sbjct: 61 AIVVSPLIALMKNQVDAIRSISSENGIAHVLNSSLNKTDVATVKADISNGITKLLYVAPE 120
Query: 330 RIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+V + ++E L + ++ VDEAHC+
Sbjct: 121 SLV-KEEYAEFL------------------------ASQTISFLAVDEAHCI 147
>gi|322834919|ref|YP_004214946.1| ATP-dependent DNA helicase RecQ [Rahnella sp. Y9602]
gi|384260143|ref|YP_005404077.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis HX2]
gi|321170120|gb|ADW75819.1| ATP-dependent DNA helicase RecQ [Rahnella sp. Y9602]
gi|380756119|gb|AFE60510.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis HX2]
Length = 610
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 74/192 (38%), Gaps = 75/192 (39%)
Query: 214 EFANVVI---FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------ 258
E A+ V+ FG + FRP Q +++ +DC V++PTGGGKSLCYQ
Sbjct: 11 ELAHQVLRDTFGYQQFRPGQQTIINTALSGRDCLVVMPTGGGKSLCYQIPALVMDGLTLV 70
Query: 259 ---------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFV 309
DQ+ L + G+ A LNS QT Q V+ R G +
Sbjct: 71 VSPLISLMKDQVDQL-MAAGVEAGCLNSTQTREQQLEVMAGCRAGRI------------- 116
Query: 310 LTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQ 369
K+LY+ PER++ F E L+ Q
Sbjct: 117 ------------KMLYIAPERLMMG-DFLEQLQ------------------------QWN 139
Query: 370 LAGFVVDEAHCV 381
A VDEAHC+
Sbjct: 140 PAMLAVDEAHCI 151
>gi|345301389|ref|YP_004830747.1| ATP-dependent DNA helicase RecQ [Enterobacter asburiae LF7a]
gi|345095326|gb|AEN66962.1| ATP-dependent DNA helicase RecQ [Enterobacter asburiae LF7a]
Length = 630
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 53/132 (40%), Gaps = 45/132 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q + +DC V++PTGGGKSLCYQ + LN
Sbjct: 42 FGYQQFRPGQETIIDTVLGGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLMKD 101
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS QT Q V+ R G +
Sbjct: 102 QVDQLLANGVAAACLNSTQTREQQLEVMAGCRTGQI------------------------ 137
Query: 321 CKLLYVTPERIV 332
+LLY+ PER++
Sbjct: 138 -RLLYIAPERLM 148
>gi|262273198|ref|ZP_06051014.1| ATP-dependent DNA helicase RecQ [Grimontia hollisae CIP 101886]
gi|262222776|gb|EEY74085.1| ATP-dependent DNA helicase RecQ [Grimontia hollisae CIP 101886]
Length = 616
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 73/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG ++R Q + A++ +D V++PTGGGKSLCYQ
Sbjct: 23 VFGYHSYRDGQKEIIDATIGGRDALVIMPTGGGKSLCYQIPALVRDGVTIVISPLISLMK 82
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L L G+ A LNS T + Q LR G
Sbjct: 83 DQVDQL-LANGVQAACLNSSMTPESQSDTWQALRNG------------------------ 117
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+ KLLYV+PERI+ + F E RL+ +T ++ VDEA
Sbjct: 118 -NLKLLYVSPERIL-MRDFIE-----------RLQAVTLGLI-------------AVDEA 151
Query: 379 HCV 381
HC+
Sbjct: 152 HCI 154
>gi|323307639|gb|EGA60904.1| Sgs1p [Saccharomyces cerevisiae FostersO]
Length = 1396
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+F FRP Q +A A++ +D FVL+PTGGGKSLCY
Sbjct: 673 VFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSGKTHGTTIVISPLI 732
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L I A+ +S+ T Q RQ L F++ L+
Sbjct: 733 SLMQDQVEHL-LNKNIKASMFSSRGTAEQR-------RQTFNL----FINGLL------- 773
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
L+Y++PE I ++ + L+ G +LA V
Sbjct: 774 -------DLVYISPEMISASEQCKRAISRLYADG--------------------KLARIV 806
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 807 VDEAHCV 813
>gi|260774489|ref|ZP_05883403.1| ATP-dependent DNA helicase RecQ [Vibrio metschnikovii CIP 69.14]
gi|260610616|gb|EEX35821.1| ATP-dependent DNA helicase RecQ [Vibrio metschnikovii CIP 69.14]
Length = 611
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 36/165 (21%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIIT---LNLKFGIPATFLN 276
+FG + FR Q + +A++A QD V++PTGGGKSLCYQ + L + + +
Sbjct: 23 VFGYQTFRVGQQEVIEAAIAGQDSLVIMPTGGGKSLCYQIPALVFPGLTVVISPLISLMK 82
Query: 277 SQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQS 336
Q +A V E + + ++ +R ++ KLLYV+PER++
Sbjct: 83 DQVDQLKANGVAAECVNSSLSRET--------LIAIYNRINRGQIKLLYVSPERVL-MAD 133
Query: 337 FSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F E L+ Q LA VDEAHC+
Sbjct: 134 FIERLQ------------------------QLPLAMIAVDEAHCI 154
>gi|359434605|ref|ZP_09224868.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20652]
gi|357918814|dbj|GAA61117.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20652]
Length = 607
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 67/183 (36%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q A++ QD VLLPTGGGKS+CY Q
Sbjct: 22 VFGYSEFRDGQKTVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+ A ++N+ + V Q+L QG +
Sbjct: 82 DQVTQLQ-ALGVKAAYVNNSLAREEQQLVYQQLHQGQI---------------------- 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PE K L R+ RL L + F +DEA
Sbjct: 119 ---KLLYVAPE------------KVLQREFLERLSHLNVSL-------------FAIDEA 150
Query: 379 HCV 381
HCV
Sbjct: 151 HCV 153
>gi|291615730|ref|YP_003518472.1| RecQ [Pantoea ananatis LMG 20103]
gi|378769205|ref|YP_005197680.1| ATP-dependent DNA helicase RecQ [Pantoea ananatis LMG 5342]
gi|386081281|ref|YP_005994806.1| ATP-dependent DNA helicase RecQ [Pantoea ananatis PA13]
gi|291150760|gb|ADD75344.1| RecQ [Pantoea ananatis LMG 20103]
gi|354990462|gb|AER34586.1| ATP-dependent DNA helicase RecQ [Pantoea ananatis PA13]
gi|365188693|emb|CCF11643.1| ATP-dependent DNA helicase RecQ [Pantoea ananatis LMG 5342]
Length = 608
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 47/133 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q +++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQTIINEALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS T Q V+ + R G V
Sbjct: 81 QVDQL-LANGVAAACLNSTMTREQQQVVMADCRNGRV----------------------- 116
Query: 320 SCKLLYVTPERIV 332
KLLY+ PER++
Sbjct: 117 --KLLYIAPERLM 127
>gi|222109326|ref|YP_002551590.1| ATP-dependent DNA helicase recq [Acidovorax ebreus TPSY]
gi|221728770|gb|ACM31590.1| ATP-dependent DNA helicase RecQ [Acidovorax ebreus TPSY]
Length = 623
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 69/187 (36%), Gaps = 72/187 (38%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR Q +A D VL+PTGGGKSLCYQ
Sbjct: 11 VFGYEQFRGPQQAIIDHVIAGGDALVLMPTGGGKSLCYQVPAIVRRDAGLGVTVVVSPLI 70
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L+ + G+ A FLNS Q V + L +G +
Sbjct: 71 ALMHDQVGALH-EAGVEAAFLNSTLDWQQTQDVERRLARGEI------------------ 111
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
LLY PER+ ++ F +L LH +G QL F
Sbjct: 112 -------TLLYAAPERVTTDR-FLTLLDGLHARG--------------------QLGLFA 143
Query: 375 VDEAHCV 381
+DEAHCV
Sbjct: 144 IDEAHCV 150
>gi|268570477|ref|XP_002640754.1| Hypothetical protein CBG24191 [Caenorhabditis briggsae]
gi|296439745|sp|A8WK63.1|RECQ1_CAEBR RecName: Full=Putative ATP-dependent DNA helicase Q1
Length = 618
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 73/173 (42%), Gaps = 52/173 (30%)
Query: 226 FRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------DQIITL 264
FRPLQ A A ++K+D V+L TGGGKSLCYQ DQI+ L
Sbjct: 87 FRPLQSAAINAVMSKEDAIVILSTGGGKSLCYQLPALLAKGLTLVISPLVSLVEDQIMQL 146
Query: 265 NLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLL 324
K GI A LN+ +A V Q + +G +LL
Sbjct: 147 Q-KLGIDAASLNANTPKDEAKRVEQAITKG-----------------------STELRLL 182
Query: 325 YVTPERIVGNQS-FSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVD 376
YVTPE++ ++ +++ K L G LK++ D V H C + F D
Sbjct: 183 YVTPEKLAKSKRMMNQLEKSL---GVGYLKLIAIDEV---HCCSQWGHDFRTD 229
>gi|418054291|ref|ZP_12692347.1| ATP-dependent DNA helicase RecQ [Hyphomicrobium denitrificans
1NES1]
gi|353211916|gb|EHB77316.1| ATP-dependent DNA helicase RecQ [Hyphomicrobium denitrificans
1NES1]
Length = 728
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 66/183 (36%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG + FRPLQ + DC L+PTGGGKSLCY Q
Sbjct: 30 VFGYKGFRPLQGDIIDTILRGGDCLALMPTGGGKSLCYQIPSLVRPGTGIVVSPLIALMQ 89
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+ A FLNS Q S +Q Q
Sbjct: 90 DQVDALR-DLGVKAAFLNSTQDRS---------------TQDQIERQFA----------A 123
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+ LLYV PER+V ++ + L + I L F +DEA
Sbjct: 124 DALDLLYVAPERLVQERTLA-----LFERADIAL--------------------FAIDEA 158
Query: 379 HCV 381
HCV
Sbjct: 159 HCV 161
>gi|28198526|ref|NP_778840.1| ATP-dependent DNA helicase [Xylella fastidiosa Temecula1]
gi|28056610|gb|AAO28489.1| ATP-dependent DNA helicase [Xylella fastidiosa Temecula1]
Length = 600
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 69/183 (37%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q + A D VL+PTGGGKSLCY Q
Sbjct: 14 VFGYDTFRGPQQAIIEHVAAGHDALVLMPTGGGKSLCYQVPALLRKGIGVVISPLIALMQ 73
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ TL + G+ A +LNS +QA Q + LV +
Sbjct: 74 DQVETLR-QLGVRAAYLNSTLDATQA----QRIEHALVTA-------------------- 108
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
LLY+TPER++ + L L R Q+A F +DEA
Sbjct: 109 -DLDLLYITPERLLT----AHFLSLLERS---------------------QIALFAIDEA 142
Query: 379 HCV 381
HCV
Sbjct: 143 HCV 145
>gi|385786868|ref|YP_005817977.1| ATP-dependent DNA helicase RecQ [Erwinia sp. Ejp617]
gi|310766140|gb|ADP11090.1| ATP-dependent DNA helicase RecQ [Erwinia sp. Ejp617]
Length = 610
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 67/182 (36%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + S+ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQTIIQESLNGRDCLVVMPTGGGKSLCYQIPALVRQGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS Q + V+ R G V
Sbjct: 81 QVDQL-LANGVAAACLNSTQNREEQQNVMAGCRSGTV----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLY+ PER++ + ++ C A VDEAH
Sbjct: 117 --RLLYIAPERLMMDNFLEQLTHC-------------------------NPAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|375267036|ref|YP_005024479.1| ATP-dependent DNA helicase RecQ [Vibrio sp. EJY3]
gi|369842356|gb|AEX23500.1| ATP-dependent DNA helicase RecQ [Vibrio sp. EJY3]
Length = 611
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 36/165 (21%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN---LKFGIPATFLN 276
+FG + FR Q + A++ QD V++PTGGGKSLCYQ + N L + +
Sbjct: 23 VFGYQKFRDGQQEVIDAAIDGQDSLVIMPTGGGKSLCYQIPALVRNGITLVISPLISLMK 82
Query: 277 SQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQS 336
Q +A V E + + +L+ +R KL+YV+PER++ +
Sbjct: 83 DQVDQLKANGVAAECVNSTMSREE--------LLSVYNRMHNGQLKLIYVSPERVL-MRD 133
Query: 337 FSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F E L+ L LA VDEAHC+
Sbjct: 134 FIERLESL------------------------PLAMIAVDEAHCI 154
>gi|349580478|dbj|GAA25638.1| K7_Sgs1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1447
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+F FRP Q +A A++ +D FVL+PTGGGKSLCY
Sbjct: 673 VFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSGKTHGTTIVISPLI 732
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L I A+ +S+ T Q RQ L F++ L+
Sbjct: 733 SLMQDQVEHL-LNKNIKASMFSSRGTAEQR-------RQTFNL----FINGLL------- 773
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
L+Y++PE I ++ + L+ G +LA V
Sbjct: 774 -------DLVYISPEMISASEQCKRAISRLYADG--------------------KLARIV 806
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 807 VDEAHCV 813
>gi|227535440|ref|ZP_03965489.1| ATP-dependent DNA helicase RecQ [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|418001700|ref|ZP_12641835.1| ATP-dependent DNA helicase [Lactobacillus casei UCD174]
gi|227186923|gb|EEI66990.1| ATP-dependent DNA helicase RecQ [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|410545961|gb|EKQ20239.1| ATP-dependent DNA helicase [Lactobacillus casei UCD174]
Length = 592
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q+QA +A + V++PTGGGKSLCYQ D
Sbjct: 14 FGYDHFRAGQNQAISRVLAGESTLVVMPTGGGKSLCYQIPAMLLSGLTLVVSPLIALMKD 73
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN GIPA F+NS + A L + R G +
Sbjct: 74 QVDALN-DNGIPAAFINSTLDYQEIADRLDQARSGRI----------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER + + R GS TD+ + F +DEAH
Sbjct: 110 --KLLYVAPERF-------DTDWFVQRLGS-------TDISL-----------FAIDEAH 142
Query: 380 CV 381
C+
Sbjct: 143 CI 144
>gi|402220569|gb|EJU00640.1| ATP-dependent DNA helicase [Dacryopinax sp. DJM-731 SS1]
Length = 725
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 82/199 (41%), Gaps = 64/199 (32%)
Query: 210 LDDMEFANVV------IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ----- 258
+DD E++ + +FG + FR Q C A++ +D ++PTGGGKSL YQ
Sbjct: 1 MDDFEWSGELLHRAKQVFGIQDFRFCQKGVCNANMDGRDVVCVMPTGGGKSLTYQLPALL 60
Query: 259 ----------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYF 302
DQI+ L + G+ A L ++ V L + +H
Sbjct: 61 TPGTTVVISPLVSLITDQILHLR-EAGVEAVMLTGGTKKEESREVFNRLGK----KKH-- 113
Query: 303 LHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVL 362
A +++ KL YVTPERI +++F +++ + G
Sbjct: 114 ----------AREQEEKEIKLCYVTPERIAKSKTFMSLMEKMALDG-------------- 149
Query: 363 PHTCQRQLAGFVVDEAHCV 381
+LA V+DEAHCV
Sbjct: 150 ------RLARIVIDEAHCV 162
>gi|254413079|ref|ZP_05026851.1| ATP-dependent DNA helicase RecQ [Coleofasciculus chthonoplastes PCC
7420]
gi|196180243|gb|EDX75235.1| ATP-dependent DNA helicase RecQ [Coleofasciculus chthonoplastes PCC
7420]
Length = 731
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 83/197 (42%), Gaps = 71/197 (36%)
Query: 206 ELQALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY-------- 257
+LQ+L D A FG FRP Q Q + ++ +D +++PTGGGKSLC+
Sbjct: 25 QLQSLGD---ALKQFFGYTTFRPGQQQIVEEALQNRDLLIIMPTGGGKSLCFQLPALLKP 81
Query: 258 -------------QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLH 304
QDQ+ L + GI ATFLNS T+S A +E+ +L+
Sbjct: 82 GLTVVVSPLIALMQDQVDAL-VDNGIGATFLNS--TLSWDAVRSREM---AILNG----- 130
Query: 305 QLIFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPH 364
KLLYV PER++ + F+ L+ +
Sbjct: 131 ---------------KIKLLYVAPERLLA-ERFAPFLEQVR------------------- 155
Query: 365 TCQRQLAGFVVDEAHCV 381
Q ++ F VDEAHCV
Sbjct: 156 -SQVGISAFAVDEAHCV 171
>gi|418004798|ref|ZP_12644808.1| ATP-dependent DNA helicase [Lactobacillus casei UW1]
gi|418007720|ref|ZP_12647596.1| ATP-dependent DNA helicase [Lactobacillus casei UW4]
gi|410548272|gb|EKQ22478.1| ATP-dependent DNA helicase [Lactobacillus casei UW4]
gi|410548729|gb|EKQ22918.1| ATP-dependent DNA helicase [Lactobacillus casei UW1]
Length = 592
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q+QA +A + V++PTGGGKSLCYQ D
Sbjct: 14 FGYDHFRAGQNQAISRVLAGESTLVVMPTGGGKSLCYQIPAMLLSGLTLVVSPLIALMKD 73
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN GIPA F+NS + A L + R G +
Sbjct: 74 QVDALN-DNGIPAAFINSTLDYQEIADRLDQARSGRI----------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER + + R GS TD+ + F +DEAH
Sbjct: 110 --KLLYVAPERF-------DTDWFVQRLGS-------TDISL-----------FAIDEAH 142
Query: 380 CV 381
C+
Sbjct: 143 CI 144
>gi|417998794|ref|ZP_12639009.1| ATP-dependent DNA helicase [Lactobacillus casei T71499]
gi|410540398|gb|EKQ14913.1| ATP-dependent DNA helicase [Lactobacillus casei T71499]
Length = 592
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q+QA +A + V++PTGGGKSLCYQ D
Sbjct: 14 FGYDHFRAGQNQAISRVLAGESTLVVMPTGGGKSLCYQIPAMLLSGLTLVVSPLIALMKD 73
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN GIPA F+NS + A L + R G +
Sbjct: 74 QVDALN-DNGIPAAFINSTLDYQEIADRLDQARSGRI----------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER + + R GS TD+ + F +DEAH
Sbjct: 110 --KLLYVAPERF-------DTDWFVQRLGS-------TDISL-----------FAIDEAH 142
Query: 380 CV 381
C+
Sbjct: 143 CI 144
>gi|374334314|ref|YP_005091001.1| ATP-dependent DNA helicase RecQ [Oceanimonas sp. GK1]
gi|372984001|gb|AEY00251.1| ATP-dependent DNA helicase RecQ [Oceanimonas sp. GK1]
Length = 608
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 72/183 (39%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG + FR Q + +A+VA +D V++PTGGGKSLCYQ
Sbjct: 24 VFGYQDFRDGQLEIVEAAVAGRDAMVIMPTGGGKSLCYQIPALLRPGLTVVVSPLISLMK 83
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ TL + G+ A ++NS + LR+G
Sbjct: 84 DQVDTL-VANGVAAAYINSSLSRDTMLRHFTALRRG------------------------ 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV+PER++ F E L L +L F +DEA
Sbjct: 119 -EIKLLYVSPERLL-QHEFMERLGEL------------------------ELGLFAIDEA 152
Query: 379 HCV 381
HC+
Sbjct: 153 HCI 155
>gi|335048951|ref|ZP_08541963.1| ATP-dependent DNA helicase RecQ [Megasphaera sp. UPII 199-6]
gi|333764734|gb|EGL42120.1| ATP-dependent DNA helicase RecQ [Megasphaera sp. UPII 199-6]
Length = 604
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 73/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q + ++ +DC ++PTG GKSLC+Q D
Sbjct: 11 FGYPSFRPGQEAVIETILSGRDCLAIMPTGAGKSLCFQIPALLLQGLTLVISPLISLMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + IPA ++NSQ T++ L +R G V
Sbjct: 71 QVDALTAQH-IPAVYINSQCTLADLKYRLGAIRSGRV----------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+L+YV+PER+ N+ F+ ++ L +A VVDEAH
Sbjct: 107 --RLVYVSPERL-QNEFFTNFMQTL------------------------PVAQVVVDEAH 139
Query: 380 CV 381
CV
Sbjct: 140 CV 141
>gi|323345242|ref|ZP_08085465.1| ATP-dependent helicase RecQ [Prevotella oralis ATCC 33269]
gi|323093356|gb|EFZ35934.1| ATP-dependent helicase RecQ [Prevotella oralis ATCC 33269]
Length = 615
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 68/183 (37%), Gaps = 75/183 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
+G +FRP Q + + + QDCFVL+PTGGGKS+CYQ D
Sbjct: 11 YGYNSFRPNQEKIIQEIIQGQDCFVLMPTGGGKSICYQIPALAMQGTAVVVSPLISLMHD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GI A LNS +Q + ++ G
Sbjct: 71 QVQALKTN-GIAAEELNSVNDANQDTMIRRKCMSG------------------------- 104
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQR-QLAGFVVDEA 378
KL+YV+PER++ +PH ++ F +DEA
Sbjct: 105 ELKLIYVSPERLISE---------------------------IPHLFSSIHISLFAIDEA 137
Query: 379 HCV 381
HC+
Sbjct: 138 HCI 140
>gi|354594252|ref|ZP_09012293.1| ATP-dependent DNA helicase RecQ [Commensalibacter intestini A911]
gi|353672427|gb|EHD14125.1| ATP-dependent DNA helicase RecQ [Commensalibacter intestini A911]
Length = 610
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 76/183 (41%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+FG FR LQ QA + QD +L+PTGGGKS+CYQ
Sbjct: 26 VFGYEDFRGLQQQAIDFVMQGQDVLLLMPTGGGKSICYQIPSLCRPGMGLVISPLIALMD 85
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L + GI A L+S+ +AA++ Q++ G
Sbjct: 86 DQVAALR-QVGINAGALHSELEPQEAASIRQDMMNG------------------------ 120
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
S LLY++PER++ + ++L+ L R +P L+ +DEA
Sbjct: 121 -SLDLLYISPERLLSD----DMLRFLKR---------------IP------LSLIAIDEA 154
Query: 379 HCV 381
HCV
Sbjct: 155 HCV 157
>gi|6323844|ref|NP_013915.1| Sgs1p [Saccharomyces cerevisiae S288c]
gi|464912|sp|P35187.1|SGS1_YEAST RecName: Full=ATP-dependent helicase SGS1; AltName: Full=Helicase
TPS1
gi|349194|gb|AAA35167.1| bps. 390..881 = homology to E.coli recQ; bps. 414..430 = ATP
binding site [Saccharomyces cerevisiae]
gi|642282|emb|CAA87811.1| Tps1p [Saccharomyces cerevisiae]
gi|726279|gb|AAB60289.1| Sgs1p [Saccharomyces cerevisiae]
gi|285814193|tpg|DAA10088.1| TPA: Sgs1p [Saccharomyces cerevisiae S288c]
Length = 1447
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+F FRP Q +A A++ +D FVL+PTGGGKSLCY
Sbjct: 673 VFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSGKTHGTTIVISPLI 732
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L I A+ +S+ T Q RQ L F++ L+
Sbjct: 733 SLMQDQVEHL-LNKNIKASMFSSRGTAEQR-------RQTFNL----FINGLL------- 773
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
L+Y++PE I ++ + L+ G +LA V
Sbjct: 774 -------DLVYISPEMISASEQCKRAISRLYADG--------------------KLARIV 806
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 807 VDEAHCV 813
>gi|423223965|ref|ZP_17210433.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
gi|392637198|gb|EIY31072.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
Length = 611
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + + +A +D VL+PTGGGKS+CYQ D
Sbjct: 18 FGYDSFRPLQEEIIRTLLAGRDSLVLMPTGGGKSICYQLPALLCEGTAVVVSPLISLMKD 77
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L G+ A LNS ++ AA+ + +G
Sbjct: 78 QVESLCAN-GVAAGALNSSNDETENAALRRSCMEG------------------------- 111
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ ++ +L+ +H ++ F +DEAH
Sbjct: 112 KLKLLYISPEKLIAEANY--LLRDMH------------------------ISLFAIDEAH 145
Query: 380 CV 381
C+
Sbjct: 146 CI 147
>gi|290968842|ref|ZP_06560379.1| ATP-dependent DNA helicase RecQ [Megasphaera genomosp. type_1 str.
28L]
gi|290781138|gb|EFD93729.1| ATP-dependent DNA helicase RecQ [Megasphaera genomosp. type_1 str.
28L]
Length = 604
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 73/182 (40%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q + ++ +DC ++PTG GKSLC+Q D
Sbjct: 11 FGYPSFRPGQEAVIETILSGRDCLAIMPTGAGKSLCFQIPALLLQGLTLVISPLISLMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L + IPA ++NSQ T++ L +R G V
Sbjct: 71 QVDALTAQH-IPAVYINSQCTLADLKYRLGAIRSGRV----------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+L+YV+PER+ N+ F+ ++ L +A VVDEAH
Sbjct: 107 --RLVYVSPERL-QNEFFTNFMQTL------------------------PVAQVVVDEAH 139
Query: 380 CV 381
CV
Sbjct: 140 CV 141
>gi|288550569|ref|ZP_05970934.2| ATP-dependent DNA helicase RecQ [Enterobacter cancerogenus ATCC
35316]
gi|288314641|gb|EFC53579.1| ATP-dependent DNA helicase RecQ [Enterobacter cancerogenus ATCC
35316]
Length = 630
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 54/132 (40%), Gaps = 45/132 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q + + +DC V++PTGGGKSLCYQ + LN
Sbjct: 42 FGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLMKD 101
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS QT Q V+ R G +
Sbjct: 102 QVDQLLANGVAAACLNSTQTREQQQDVMAGCRNGQI------------------------ 137
Query: 321 CKLLYVTPERIV 332
+LLY+ PER++
Sbjct: 138 -RLLYIAPERLM 148
>gi|259906892|ref|YP_002647248.1| ATP-dependent DNA helicase RecQ [Erwinia pyrifoliae Ep1/96]
gi|387869602|ref|YP_005800972.1| ATP-dependent DNA helicase RecQ [Erwinia pyrifoliae DSM 12163]
gi|224962514|emb|CAX53969.1| ATP-dependent DNA helicase [Erwinia pyrifoliae Ep1/96]
gi|283476685|emb|CAY72514.1| ATP-dependent DNA helicase RecQ [Erwinia pyrifoliae DSM 12163]
Length = 610
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 67/182 (36%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q + S+ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQTIIQESLNGRDCLVVMPTGGGKSLCYQIPALVRQGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS Q + V+ R G V
Sbjct: 81 QVDQL-LANGVAAACLNSTQNREEQQNVMAGCRSGTV----------------------- 116
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
+LLY+ PER++ + ++ C A VDEAH
Sbjct: 117 --RLLYIAPERLMMDNFLEQLTHC-------------------------NPAMLAVDEAH 149
Query: 380 CV 381
C+
Sbjct: 150 CI 151
>gi|406699606|gb|EKD02807.1| ATP dependent DNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 834
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 39/168 (23%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLNLKFGI-----PATFL 275
+G FRP Q + C+ S+ D V+ PTG GKS+C+ Q+ L +++GI P L
Sbjct: 60 WGYSKFRPPQQEVCELSLKGCDVLVVAPTGIGKSICF--QLPALTIEYGITIVVSPLKAL 117
Query: 276 NSQQTVS--QAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVG 333
++Q +S + + L + ++H F H+L P +LLY TPE +
Sbjct: 118 MAEQVMSLREKGIPVAALNENTSRAEHVF-HELKLA--------HPRLRLLYATPESLC- 167
Query: 334 NQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
+ + H+ Q+Q+A V+DEAH +
Sbjct: 168 RKDYQACFNTAHQ--------------------QKQIARIVIDEAHVL 195
>gi|294495880|ref|YP_003542373.1| ATP-dependent DNA helicase RecQ [Methanohalophilus mahii DSM 5219]
gi|292666879|gb|ADE36728.1| ATP-dependent DNA helicase RecQ [Methanohalophilus mahii DSM 5219]
Length = 599
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 69/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FRPLQ + + K+D FVL+PTGGGKSLCYQ D
Sbjct: 9 FGYDTFRPLQENIIQDVLNKKDVFVLMPTGGGKSLCYQLPSLLMEGVTVVVSPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L GI A ++NS S+ + V L +G
Sbjct: 69 QVDRL-LSHGIAAAYMNSTLDNSEMSHVKDSLIRG------------------------- 102
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
LLYV PER+ + LK+L V L F VDEAH
Sbjct: 103 KLDLLYVAPERLAMPST---------------LKLLAKVNVNL----------FAVDEAH 137
Query: 380 CV 381
C+
Sbjct: 138 CI 139
>gi|213692860|ref|YP_002323446.1| ATP-dependent DNA helicase RecQ [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|213524321|gb|ACJ53068.1| ATP-dependent DNA helicase RecQ [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
Length = 651
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q +A +A +D ++PTG GKS+CYQ D
Sbjct: 15 FGYDSFRPGQQGIVEALLAGRDVLGVMPTGAGKSVCYQIPAALSPGATLVISPLISLMRD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN G+PA F+N+ QT + A V + G +
Sbjct: 75 QVDALN-DLGLPAAFINTTQTPDEQAMVFAQAAAGQI----------------------- 110
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER+ G R T + ++ VDEAH
Sbjct: 111 --KLLYVAPERL--------------ETGRFRDFAARTPISLI-----------AVDEAH 143
Query: 380 CV 381
CV
Sbjct: 144 CV 145
>gi|392533361|ref|ZP_10280498.1| ATP-dependent DNA helicase [Pseudoalteromonas arctica A 37-1-2]
Length = 607
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 67/183 (36%), Gaps = 72/183 (39%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG FR Q A++ QD VLLPTGGGKS+CY Q
Sbjct: 22 VFGYSEFRDGQKTVIDAAINGQDSLVLLPTGGGKSVCYQIPALVLEGVTIVISPLISLMQ 81
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L G+ A ++N+ + V Q+L QG +
Sbjct: 82 DQVSQLQ-ALGVKAAYVNNSLAREEQQLVYQQLHQGQI---------------------- 118
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
KLLYV PE K L R+ RL L + F +DEA
Sbjct: 119 ---KLLYVAPE------------KVLQREFLERLSHLNVSL-------------FAIDEA 150
Query: 379 HCV 381
HCV
Sbjct: 151 HCV 153
>gi|384098146|ref|ZP_09999265.1| ATP-dependent DNA helicase recQ [Imtechella halotolerans K1]
gi|383836292|gb|EID75705.1| ATP-dependent DNA helicase recQ [Imtechella halotolerans K1]
Length = 733
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 76/195 (38%), Gaps = 75/195 (38%)
Query: 211 DDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ------------ 258
+D++ A FG F+ LQ K+ + Q+ FV++PTGGGKSLCYQ
Sbjct: 6 NDLQLALKHYFGFGKFKGLQEDVIKSIINNQNTFVIMPTGGGKSLCYQLPALVKDGTAIV 65
Query: 259 ------------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQL 306
D I ++ GI A LNS T ++ V+Q+++ G+
Sbjct: 66 ISPLIALMKNQVDAIRGISSNNGI-AHVLNSSLTKTEVKQVMQDIKSGI----------- 113
Query: 307 IFVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTC 366
KLLYV PE + + + E L+ +
Sbjct: 114 --------------TKLLYVAPESLT-KEDYIEFLRTI---------------------- 136
Query: 367 QRQLAGFVVDEAHCV 381
Q++ VDEAHC+
Sbjct: 137 --QISFVAVDEAHCI 149
>gi|217969471|ref|YP_002354705.1| ATP-dependent DNA helicase RecQ [Thauera sp. MZ1T]
gi|217506798|gb|ACK53809.1| ATP-dependent DNA helicase RecQ [Thauera sp. MZ1T]
Length = 657
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 70/183 (38%), Gaps = 68/183 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------Q 258
+FG AFR Q + + D VL+PTGGGKSLCY Q
Sbjct: 65 VFGYPAFRGEQGEIVEHVAGGGDALVLMPTGGGKSLCYQIPALLRHGTAIVVSPLIALMQ 124
Query: 259 DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDK 318
DQ+ L ++ G+ A FLNS + +A AV + L G
Sbjct: 125 DQVSAL-VEAGVRAAFLNSSLDMERARAVERALWDG------------------------ 159
Query: 319 PSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEA 378
+LLYV PER++ F + L L G + L F +DEA
Sbjct: 160 -ELELLYVAPERLM-TPRFLDQLDHLRDTGRLSL--------------------FAIDEA 197
Query: 379 HCV 381
HCV
Sbjct: 198 HCV 200
>gi|224540740|ref|ZP_03681279.1| hypothetical protein BACCELL_05654 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517639|gb|EEF86744.1| hypothetical protein BACCELL_05654 [Bacteroides cellulosilyticus
DSM 14838]
Length = 602
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRPLQ + + +A +D VL+PTGGGKS+CYQ D
Sbjct: 9 FGYDSFRPLQEEIIRTLLAGKDSLVLMPTGGGKSICYQLPALLCEGTAVVVSPLISLMKD 68
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ +L G+ A LNS ++ AA+ + +G
Sbjct: 69 QVESLCAN-GVAAGALNSSNDETENAALRRSCMEG------------------------- 102
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PE+++ ++ +L+ +H ++ F +DEAH
Sbjct: 103 KLKLLYISPEKLIAEANY--LLRDMH------------------------ISLFAIDEAH 136
Query: 380 CV 381
C+
Sbjct: 137 CI 138
>gi|239631816|ref|ZP_04674847.1| ATP-dependent DNA helicase RecQ [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|239526281|gb|EEQ65282.1| ATP-dependent DNA helicase RecQ [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 592
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q+QA +A + V++PTGGGKSLCYQ D
Sbjct: 14 FGYDHFRAGQNQAISRVLAGESTLVVMPTGGGKSLCYQIPAMLLSGLTLVVSPLIALMKD 73
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN GIPA F+NS + A L + R G +
Sbjct: 74 QVDALN-DNGIPAAFINSTLDYQEIADRLDQARSGRI----------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER + + R GS TD+ + F +DEAH
Sbjct: 110 --KLLYVAPERF-------DTDWFVQRLGS-------TDISL-----------FAIDEAH 142
Query: 380 CV 381
C+
Sbjct: 143 CI 144
>gi|294658176|ref|XP_460513.2| DEHA2F03388p [Debaryomyces hansenii CBS767]
gi|202952930|emb|CAG88826.2| DEHA2F03388p [Debaryomyces hansenii CBS767]
Length = 1367
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 71/187 (37%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ--------------------- 258
+F FRP Q A +++ +D FVL+PTGGGKSLCYQ
Sbjct: 622 VFKLSNFRPNQLHAISSTLNGKDVFVLMPTGGGKSLCYQLPALVKSGKTRGTTIVVSPLI 681
Query: 259 ----DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
DQ+ L L I A ++S+ + S+ + L R G +
Sbjct: 682 SLMQDQVQHL-LNKNIKAGMVSSKGSASERKSTLDSFRNGQL------------------ 722
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
L+Y++PE I +Q ++ L+ +LA V
Sbjct: 723 -------DLVYLSPEMINASQHIQRIITKLYD--------------------MNELARVV 755
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 756 VDEAHCV 762
>gi|392297356|gb|EIW08456.1| Sgs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1341
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+F FRP Q +A A++ +D FVL+PTGGGKSLCY
Sbjct: 567 VFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSGKTHGTTIVISPLI 626
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L I A+ +S+ T Q RQ L F++ L+
Sbjct: 627 SLMQDQVEHL-LNKNIKASMFSSRGTAEQR-------RQTFNL----FINGLL------- 667
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
L+Y++PE I ++ + L+ G +LA V
Sbjct: 668 -------DLVYISPEMISASEQCKRAISRLYADG--------------------KLARIV 700
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 701 VDEAHCV 707
>gi|381403551|ref|ZP_09928235.1| ATP-dependent DNA helicase RecQ [Pantoea sp. Sc1]
gi|380736750|gb|EIB97813.1| ATP-dependent DNA helicase RecQ [Pantoea sp. Sc1]
Length = 608
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 47/133 (35%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG + FRP Q +++ +DC V++PTGGGKSLCYQ D
Sbjct: 21 FGYQQFRPGQQTIINQALSGRDCLVVMPTGGGKSLCYQIPALVREGLTLVVSPLISLMKD 80
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L L G+ A LNS T Q V+ + R G V
Sbjct: 81 QVDQL-LANGVAAACLNSTMTREQQQTVMADCRTGRV----------------------- 116
Query: 320 SCKLLYVTPERIV 332
KLLY+ PER++
Sbjct: 117 --KLLYIAPERLM 127
>gi|259148775|emb|CAY82020.1| Sgs1p [Saccharomyces cerevisiae EC1118]
Length = 1447
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+F FRP Q +A A++ +D FVL+PTGGGKSLCY
Sbjct: 673 VFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSGKTHGTTIVISPLI 732
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L I A+ +S+ T Q RQ L F++ L+
Sbjct: 733 SLMQDQVEHL-LNKNIKASMFSSRGTAEQR-------RQTFNL----FINGLL------- 773
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
L+Y++PE I ++ + L+ G +LA V
Sbjct: 774 -------DLVYISPEMISASEQCKRAISRLYADG--------------------KLARIV 806
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 807 VDEAHCV 813
>gi|256271606|gb|EEU06648.1| Sgs1p [Saccharomyces cerevisiae JAY291]
Length = 1447
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+F FRP Q +A A++ +D FVL+PTGGGKSLCY
Sbjct: 673 VFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSGKTHGTTIVISPLI 732
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L I A+ +S+ T Q RQ L F++ L+
Sbjct: 733 SLMQDQVEHL-LNKNIKASMFSSRGTAEQR-------RQTFNL----FINGLL------- 773
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
L+Y++PE I ++ + L+ G +LA V
Sbjct: 774 -------DLVYISPEMISASEQCKRAISRLYADG--------------------KLARIV 806
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 807 VDEAHCV 813
>gi|151945893|gb|EDN64125.1| Nucleolar DNA helicase of the RecQ family involved in maintenance
of genome integrity [Saccharomyces cerevisiae YJM789]
Length = 1447
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+F FRP Q +A A++ +D FVL+PTGGGKSLCY
Sbjct: 673 VFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSGKTHGTTIVISPLI 732
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L I A+ +S+ T Q RQ L F++ L+
Sbjct: 733 SLMQDQVEHL-LNKNIKASMFSSRGTAEQR-------RQTFNL----FINGLL------- 773
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
L+Y++PE I ++ + L+ G +LA V
Sbjct: 774 -------DLVYISPEMISASEQCKRAISRLYADG--------------------KLARIV 806
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 807 VDEAHCV 813
>gi|323336083|gb|EGA77356.1| Sgs1p [Saccharomyces cerevisiae Vin13]
Length = 1447
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+F FRP Q +A A++ +D FVL+PTGGGKSLCY
Sbjct: 673 VFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSGKTHGTTIVISPLI 732
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L I A+ +S+ T Q RQ L F++ L+
Sbjct: 733 SLMQDQVEHL-LNKNIKASMFSSRGTAEQR-------RQTFNL----FINGLL------- 773
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
L+Y++PE I ++ + L+ G +LA V
Sbjct: 774 -------DLVYISPEMISASEQCKRAISRLYADG--------------------KLARIV 806
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 807 VDEAHCV 813
>gi|191638021|ref|YP_001987187.1| ATP-dependent DNA helicase RecQ [Lactobacillus casei BL23]
gi|385819774|ref|YP_005856161.1| ATP-dependent DNA helicase RecQ [Lactobacillus casei LC2W]
gi|385822916|ref|YP_005859258.1| ATP-dependent DNA helicase RecQ [Lactobacillus casei BD-II]
gi|409996881|ref|YP_006751282.1| ATP-dependent DNA helicase recQ [Lactobacillus casei W56]
gi|417986391|ref|ZP_12626962.1| ATP-dependent DNA helicase [Lactobacillus casei 32G]
gi|418010510|ref|ZP_12650287.1| ATP-dependent DNA helicase [Lactobacillus casei Lc-10]
gi|190712323|emb|CAQ66329.1| ATP-dependent DNA helicase RecQ [Lactobacillus casei BL23]
gi|327382101|gb|AEA53577.1| ATP-dependent DNA helicase RecQ [Lactobacillus casei LC2W]
gi|327385243|gb|AEA56717.1| ATP-dependent DNA helicase RecQ [Lactobacillus casei BD-II]
gi|406357893|emb|CCK22163.1| Probable ATP-dependent DNA helicase recQ [Lactobacillus casei W56]
gi|410526115|gb|EKQ01006.1| ATP-dependent DNA helicase [Lactobacillus casei 32G]
gi|410553999|gb|EKQ27987.1| ATP-dependent DNA helicase [Lactobacillus casei Lc-10]
Length = 592
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q+QA +A + V++PTGGGKSLCYQ D
Sbjct: 14 FGYDHFRAGQNQAISRVLAGESTLVVMPTGGGKSLCYQIPAMLLSGLTLVVSPLIALMKD 73
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN GIPA F+NS + A L + R G +
Sbjct: 74 QVDALN-DNGIPAAFINSTLDYQEIADRLDQARSGRI----------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER + + R GS TD+ + F +DEAH
Sbjct: 110 --KLLYVAPERF-------DTDWFVQRLGS-------TDISL-----------FAIDEAH 142
Query: 380 CV 381
C+
Sbjct: 143 CI 144
>gi|190408415|gb|EDV11680.1| ATP-dependent helicase SGS1 [Saccharomyces cerevisiae RM11-1a]
Length = 1447
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+F FRP Q +A A++ +D FVL+PTGGGKSLCY
Sbjct: 673 VFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSGKTHGTTIVISPLI 732
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L I A+ +S+ T Q RQ L F++ L+
Sbjct: 733 SLMQDQVEHL-LNKNIKASMFSSRGTAEQR-------RQTFNL----FINGLL------- 773
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
L+Y++PE I ++ + L+ G +LA V
Sbjct: 774 -------DLVYISPEMISASEQCKRAISRLYADG--------------------KLARIV 806
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 807 VDEAHCV 813
>gi|171688896|ref|XP_001909388.1| hypothetical protein [Podospora anserina S mat+]
gi|170944410|emb|CAP70520.1| unnamed protein product [Podospora anserina S mat+]
Length = 483
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 76/194 (39%), Gaps = 66/194 (34%)
Query: 209 ALDDMEFANVVIFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------- 258
++ D++F FG ++FRP Q + A++ +D FV T GKSLC+Q
Sbjct: 8 SMQDIDFTLRRQFGKKSFRPQQREIINATLEGKDVFVQAATSFGKSLCFQLPAVIDHGIT 67
Query: 259 -----------DQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLI 307
DQ+ L I A LNS ++ ++++L G
Sbjct: 68 IVISPLLSLMMDQVKALR-NSNIDARTLNSNTPFAERDHIMKDLGTG------------- 113
Query: 308 FVLTCASRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQ 367
P +LLYVTPE + F E L+ +HR Q
Sbjct: 114 ----------HPLTRLLYVTPE-LCSGPYFRERLELVHR--------------------Q 142
Query: 368 RQLAGFVVDEAHCV 381
++LA VDEAHC+
Sbjct: 143 KELARIAVDEAHCI 156
>gi|116492357|ref|YP_804092.1| ATP-dependent DNA helicase RecQ [Pediococcus pentosaceus ATCC
25745]
gi|116102507|gb|ABJ67650.1| ATP-dependent DNA helicase, RecQ-like protein [Pediococcus
pentosaceus ATCC 25745]
Length = 584
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 71/182 (39%), Gaps = 73/182 (40%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG AFRP Q +A A + Q+ ++PTGGGKSLCYQ D
Sbjct: 11 FGYDAFRPGQERAINAVLDHQNVLAVMPTGGGKSLCYQIPALMQAGLTLVISPLISLMKD 70
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ L GI ATF+NS ++ + RQG V
Sbjct: 71 QVDALAAN-GIDATFINSSLDYAEINERFSQARQGAV----------------------- 106
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLY++PER+ ++ F RL L D++ +DEAH
Sbjct: 107 --KLLYISPERL-DSEYFD------------RLAELPIDLI-------------AIDEAH 138
Query: 380 CV 381
C+
Sbjct: 139 CI 140
>gi|365763903|gb|EHN05429.1| Sgs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1314
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 71/187 (37%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCY---------------------- 257
+F FRP Q +A A++ +D FVL+PTGGGKSLCY
Sbjct: 673 VFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSGKTHGTTIVISPLI 732
Query: 258 ---QDQIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCAS 314
QDQ+ L L I A+ +S+ T Q RQ L F++ L+
Sbjct: 733 SLMQDQVEHL-LNKNIKASMFSSRGTAEQR-------RQTFNL----FINGLL------- 773
Query: 315 RKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFV 374
L+Y++PE I ++ + L+ G +LA V
Sbjct: 774 -------DLVYISPEMISASEQCKRAISRLYADG--------------------KLARIV 806
Query: 375 VDEAHCV 381
VDEAHCV
Sbjct: 807 VDEAHCV 813
>gi|291517246|emb|CBK70862.1| ATP-dependent DNA helicase RecQ [Bifidobacterium longum subsp.
longum F8]
Length = 651
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q +A +A +D ++PTG GKS+CYQ D
Sbjct: 15 FGYDSFRPGQQGIVEALLAGRDVLGVMPTGAGKSVCYQIPAALSPGMTLVISPLISLMRD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN G+PA F+N+ QT + A V + G +
Sbjct: 75 QVDALN-DLGLPAAFINTTQTPDEQAMVFAQAAAGQI----------------------- 110
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER+ G R T + ++ VDEAH
Sbjct: 111 --KLLYVAPERL--------------ETGRFRDFAARTTISLI-----------AVDEAH 143
Query: 380 CV 381
CV
Sbjct: 144 CV 145
>gi|261250050|ref|ZP_05942627.1| ATP-dependent DNA helicase RecQ [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260939554|gb|EEX95539.1| ATP-dependent DNA helicase RecQ [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 602
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 36/165 (21%)
Query: 220 IFGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIIT---LNLKFGIPATFLN 276
+FG + FR Q + +++VA QD V++PTGGGKSLCYQ + L L + +
Sbjct: 14 VFGYQIFRDGQQEVIESAVAGQDSLVIMPTGGGKSLCYQIPALVRSGLTLVISPLISLMK 73
Query: 277 SQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPSCKLLYVTPERIVGNQS 336
Q +A V E + + +++ +R + KL+YV+PER++ +
Sbjct: 74 DQVDQLKANGVAAECINSTMSREE--------LISVYNRMHSGALKLVYVSPERVL-MRD 124
Query: 337 FSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAHCV 381
F E L+ L L+ VDEAHC+
Sbjct: 125 FIERLESL------------------------PLSMIAVDEAHCI 145
>gi|23465719|ref|NP_696322.1| ATP-dependent DNA helicase RecQ [Bifidobacterium longum NCC2705]
gi|419854416|ref|ZP_14377204.1| ATP-dependent DNA helicase RecQ [Bifidobacterium longum subsp.
longum 44B]
gi|23326401|gb|AAN24958.1| ATP-dependent DNA helicase RecQ [Bifidobacterium longum NCC2705]
gi|386417756|gb|EIJ32228.1| ATP-dependent DNA helicase RecQ [Bifidobacterium longum subsp.
longum 44B]
Length = 651
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q +A +A +D ++PTG GKS+CYQ D
Sbjct: 15 FGYDSFRPGQQGIVEALLAGRDVLGVMPTGAGKSVCYQIPAALSPGMTLVISPLISLMRD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN G+PA F+N+ QT + A V + G +
Sbjct: 75 QVDALN-DLGLPAAFINTTQTPDEQAMVFAQAAAGQI----------------------- 110
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER+ G R T + ++ VDEAH
Sbjct: 111 --KLLYVAPERL--------------ETGRFRDFAARTPISLI-----------AVDEAH 143
Query: 380 CV 381
CV
Sbjct: 144 CV 145
>gi|301066129|ref|YP_003788152.1| superfamily II DNA helicase [Lactobacillus casei str. Zhang]
gi|300438536|gb|ADK18302.1| Superfamily II DNA helicase [Lactobacillus casei str. Zhang]
Length = 592
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 70/182 (38%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG FR Q+QA +A + V++PTGGGKSLCYQ D
Sbjct: 14 FGYDHFRAGQNQAISRVLAGESTLVVMPTGGGKSLCYQIPAMLLSGLTLVVSPLIALMKD 73
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN GIPA F+NS + A L + R G +
Sbjct: 74 QVDALN-DNGIPAAFINSTLDYQEIADRLDQARSGRI----------------------- 109
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER + + R GS TD+ + F +DEAH
Sbjct: 110 --KLLYVAPERF-------DTDWFVQRLGS-------TDISL-----------FAIDEAH 142
Query: 380 CV 381
C+
Sbjct: 143 CI 144
>gi|283834583|ref|ZP_06354324.1| ATP-dependent DNA helicase RecQ [Citrobacter youngae ATCC 29220]
gi|291069712|gb|EFE07821.1| ATP-dependent DNA helicase RecQ [Citrobacter youngae ATCC 29220]
Length = 609
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 55/132 (41%), Gaps = 45/132 (34%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQDQIITLN--------------- 265
FG + FRP Q + ++ +DC V++PTGGGKSLCYQ + LN
Sbjct: 21 FGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKD 80
Query: 266 -----LKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKPS 320
L G+ A LNS Q+ Q V+ R G V
Sbjct: 81 QVDQLLANGVAAACLNSTQSREQQLEVMAGCRSGQV------------------------ 116
Query: 321 CKLLYVTPERIV 332
+LLY+ PER++
Sbjct: 117 -RLLYIAPERLM 127
>gi|239622333|ref|ZP_04665364.1| ATP-dependent DNA helicase RecQ [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239514330|gb|EEQ54197.1| ATP-dependent DNA helicase RecQ [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 651
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 68/182 (37%), Gaps = 72/182 (39%)
Query: 221 FGNRAFRPLQHQACKASVAKQDCFVLLPTGGGKSLCYQ---------------------D 259
FG +FRP Q +A +A +D ++PTG GKS+CYQ D
Sbjct: 15 FGYDSFRPGQQGIVEALLAGRDVLGVMPTGAGKSVCYQIPAALSPGVTLVISPLISLMRD 74
Query: 260 QIITLNLKFGIPATFLNSQQTVSQAAAVLQELRQGLVLSQHYFLHQLIFVLTCASRKDKP 319
Q+ LN G+PA F+N+ QT + A V + G +
Sbjct: 75 QVDALN-DLGLPAAFINTTQTPDEQAMVFAQAAAGQI----------------------- 110
Query: 320 SCKLLYVTPERIVGNQSFSEVLKCLHRKGSIRLKVLTTDVVVLPHTCQRQLAGFVVDEAH 379
KLLYV PER+ G R T + ++ VDEAH
Sbjct: 111 --KLLYVAPERL--------------ETGRFRDFAARTPISLI-----------AVDEAH 143
Query: 380 CV 381
CV
Sbjct: 144 CV 145
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,640,812,661
Number of Sequences: 23463169
Number of extensions: 227754897
Number of successful extensions: 677157
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3865
Number of HSP's successfully gapped in prelim test: 1014
Number of HSP's that attempted gapping in prelim test: 666267
Number of HSP's gapped (non-prelim): 6833
length of query: 381
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 237
effective length of database: 8,980,499,031
effective search space: 2128378270347
effective search space used: 2128378270347
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)