Your job contains 1 sequence.
>042873
MASQALHPLYKNNSPTTSHKPETKMISAKRAFRSLAFSISVPLSVTLAIICIFGSGKNYR
ALPKPFWFPPLWFIHLATLSSSFFMSLAAWLVWADGGFHARSDSLLLYVAQVSLSVLWDP
LVLVTGAACLGLVFCVAHFGTLVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNYKLIYL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042873
(180 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043358 - symbol:TSPO "TSPO(outer membrane try... 316 2.4e-28 1
FB|FBgn0031263 - symbol:CG2789 species:7227 "Drosophila m... 126 3.3e-08 1
UNIPROTKB|P30536 - symbol:TSPO "Translocator protein" spe... 122 8.7e-08 1
RGD|2228 - symbol:Tspo "translocator protein" species:101... 122 8.7e-08 1
UNIPROTKB|P30535 - symbol:TSPO "Translocator protein" spe... 121 1.1e-07 1
UNIPROTKB|Q6UN27 - symbol:TSPO "Translocator protein" spe... 118 5.0e-07 1
UNIPROTKB|F1SJR8 - symbol:TSPO "Translocator protein" spe... 117 8.0e-07 1
UNIPROTKB|F1NZA2 - symbol:TSPO "Uncharacterized protein" ... 116 1.0e-06 1
MGI|MGI:88222 - symbol:Tspo "translocator protein" specie... 115 2.2e-06 1
UNIPROTKB|E2RQH5 - symbol:TSPO "Uncharacterized protein" ... 112 8.1e-06 1
UNIPROTKB|F1RVN5 - symbol:TSPO2 "Uncharacterized protein"... 107 5.6e-05 1
UNIPROTKB|E2RDM9 - symbol:TSPO2 "Uncharacterized protein"... 107 5.8e-05 1
ZFIN|ZDB-GENE-041010-125 - symbol:tspo "translocator prot... 100 0.00047 1
MGI|MGI:1917276 - symbol:Tspo2 "translocator protein 2" s... 99 0.00064 1
>TAIR|locus:2043358 [details] [associations]
symbol:TSPO "TSPO(outer membrane tryptophan-rich sensory
protein)-related" species:3702 "Arabidopsis thaliana" [GO:0005739
"mitochondrion" evidence=ISM] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005795 "Golgi stack" evidence=IDA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0016020 "membrane" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0006778 "porphyrin-containing
compound metabolic process" evidence=IMP] [GO:0020037 "heme
binding" evidence=IDA] InterPro:IPR004307 Pfam:PF03073
PIRSF:PIRSF005859 GO:GO:0005783 GO:GO:0016021 GO:GO:0009737
GO:GO:0000139 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005789 GO:GO:0006810 GO:GO:0009651 GO:GO:0005795
GO:GO:0031969 EMBL:AC005309 GO:GO:0020037 GO:GO:0006778
PANTHER:PTHR10057 EMBL:AF428356 EMBL:AY045981 EMBL:AY079391
IPI:IPI00544586 PIR:C84919 RefSeq:NP_566110.1 UniGene:At.23206
IntAct:O82245 STRING:O82245 PaxDb:O82245 PRIDE:O82245
EnsemblPlants:AT2G47770.1 GeneID:819389 KEGG:ath:AT2G47770
TAIR:At2g47770 eggNOG:NOG296779 HOGENOM:HOG000077445
InParanoid:O82245 OMA:SSSWIPP PhylomeDB:O82245
ProtClustDB:CLSN2688990 Genevestigator:O82245 Uniprot:O82245
Length = 196
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 64/177 (36%), Positives = 93/177 (52%)
Query: 2 ASQALHPLYKNNSPTTSHKPETKMISAKRAFRSLAFSISVPLSVTLAIICIFGSGKNY-R 60
A+ A+ + ++ K + K AKR +SL +++ P+ VTL G+ Y
Sbjct: 17 ATTAMAETERKSADDNKGKRDQKRAMAKRGLKSLTVAVAAPVLVTLFATYFLGTSDGYGN 76
Query: 61 AXXXXXXXXXXXXIHLATLSSSFFMSLAAWLVWADGGFHARSDSLLLYVAQVSLSVLWDP 120
+H L+SS M LAAWLVW DGGFH + ++L LY+AQ L ++WDP
Sbjct: 77 RAKSSSWIPPLWLLHTTCLASSGLMGLAAWLVWVDGGFHKKPNALYLYLAQFLLCLVWDP 136
Query: 121 LVLVTGAACLGLVFCVAHFGTLVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNYKL 177
+ G+ GL + L CYK+F +++P A +LVKPCLAW F+ VN KL
Sbjct: 137 VTFRVGSGVAGLAVWLGQSAALFGCYKAFNEISPVAGNLVKPCLAWAAFVAAVNVKL 193
>FB|FBgn0031263 [details] [associations]
symbol:CG2789 species:7227 "Drosophila melanogaster"
[GO:0008503 "benzodiazepine receptor activity" evidence=ISS]
[GO:0005740 "mitochondrial envelope" evidence=ISS] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR004307
Pfam:PF03073 PIRSF:PIRSF005859 GO:GO:0016021 EMBL:AE014134
PANTHER:PTHR10057 GeneTree:ENSGT00390000012980 eggNOG:COG3476
KO:K05770 OMA:ARQMGWA EMBL:AY058269 RefSeq:NP_608531.1
UniGene:Dm.4332 IntAct:Q9VPR1 STRING:Q9VPR1
EnsemblMetazoa:FBtr0078066 GeneID:33231 KEGG:dme:Dmel_CG2789
UCSC:CG2789-RA FlyBase:FBgn0031263 InParanoid:Q9VPR1
OrthoDB:EOG4T1G3J GenomeRNAi:33231 NextBio:782568 Uniprot:Q9VPR1
Length = 185
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 33/96 (34%), Positives = 47/96 (48%)
Query: 85 MSLAAWLVWADGGFHARSDS---LLLYVAQVSLSVLWDPLVLVTGAACLGLVFCVAHFGT 141
M ++LVW DGG A + L+ Y Q++L+ W P+ GL+ VA
Sbjct: 65 MGYGSYLVWRDGGGFAGEAAKLPLIAYGTQLALNWAWTPIFFGQHNIKGGLIDIVALTAA 124
Query: 142 LVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNYKL 177
AC F +VN A L P +AW+GF T +NY +
Sbjct: 125 ASACGVLFYRVNKTAGLLFVPYVAWLGFATALNYAI 160
>UNIPROTKB|P30536 [details] [associations]
symbol:TSPO "Translocator protein" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005497 "androgen binding" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0007568 "aging"
evidence=IEA] [GO:0008347 "glial cell migration" evidence=IEA]
[GO:0008503 "benzodiazepine receptor activity" evidence=IEA]
[GO:0010042 "response to manganese ion" evidence=IEA] [GO:0010266
"response to vitamin B1" evidence=IEA] [GO:0010940 "positive
regulation of necrotic cell death" evidence=IEA] [GO:0014012
"peripheral nervous system axon regeneration" evidence=IEA]
[GO:0030325 "adrenal gland development" evidence=IEA] [GO:0032570
"response to progesterone stimulus" evidence=IEA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA] [GO:0033574 "response to testosterone stimulus"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0045019 "negative regulation of nitric oxide
biosynthetic process" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0050810 "regulation of steroid
biosynthetic process" evidence=IEA] [GO:0051901 "positive
regulation of mitochondrial depolarization" evidence=IEA]
[GO:0051928 "positive regulation of calcium ion transport"
evidence=IEA] [GO:0060242 "contact inhibition" evidence=IEA]
[GO:0060252 "positive regulation of glial cell proliferation"
evidence=IEA] [GO:0060253 "negative regulation of glial cell
proliferation" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0071294 "cellular response to
zinc ion" evidence=IEA] [GO:0071476 "cellular hypotonic response"
evidence=IEA] [GO:2000379 "positive regulation of reactive oxygen
species metabolic process" evidence=IEA] [GO:0006626 "protein
targeting to mitochondrion" evidence=TAS] [GO:0006783 "heme
biosynthetic process" evidence=TAS] [GO:0006820 "anion transport"
evidence=TAS] [GO:0008202 "steroid metabolic process" evidence=TAS]
[GO:0008283 "cell proliferation" evidence=TAS] [GO:0015485
"cholesterol binding" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0032374 "regulation of cholesterol transport"
evidence=TAS] InterPro:IPR004307 Pfam:PF03073 PIRSF:PIRSF005859
GO:GO:0016021 GO:GO:0006915 GO:GO:0006626 GO:GO:0005741
GO:GO:0006694 GO:GO:0030325 GO:GO:0042493 GO:GO:0050810
GO:GO:0008202 GO:GO:0008283 GO:GO:0007568 GO:GO:0048266
GO:GO:0015485 GO:GO:0071222 GO:GO:0043065 GO:GO:2000379
GO:GO:0032720 GO:GO:0010042 GO:GO:0032570 GO:GO:0033574
DrugBank:DB00962 GO:GO:0071294 GO:GO:0006783 GO:GO:0051901
GO:GO:0045019 GO:GO:0005497 DrugBank:DB01068 DrugBank:DB00822
GO:GO:0051928 DrugBank:DB00186 GO:GO:0010940 GO:GO:0014012
GO:GO:0032374 GO:GO:0008347 DrugBank:DB00829 DrugBank:DB01198
DrugBank:DB00546 DrugBank:DB01544 DrugBank:DB00231 DrugBank:DB00402
DrugBank:DB00404 DrugBank:DB01215 DrugBank:DB00897 DrugBank:DB00425
GO:GO:0071476 GO:GO:0060252 GO:GO:0060253 DrugBank:DB00628
DrugBank:DB00801 GO:GO:0008503 GO:GO:0010266 GO:GO:0006820
GO:GO:0060242 EMBL:Z82214 HOGENOM:HOG000224659 OrthoDB:EOG4HMJBC
PANTHER:PTHR10057 EMBL:M36035 EMBL:U12421 EMBL:AY998017
EMBL:BT006949 EMBL:CR456409 EMBL:AY383615 EMBL:BC001110
IPI:IPI00026850 PIR:I38724 PIR:JE0149 PIR:S14257 RefSeq:NP_000705.2
RefSeq:NP_001243459.1 RefSeq:NP_001243460.1 UniGene:Hs.202
ProteinModelPortal:P30536 STRING:P30536 TCDB:9.C.6.1.1 DMDM:464399
PaxDb:P30536 PRIDE:P30536 DNASU:706 Ensembl:ENST00000329563
Ensembl:ENST00000337554 GeneID:706 KEGG:hsa:706 UCSC:uc003bdn.3
CTD:706 GeneCards:GC22P043547 HGNC:HGNC:1158 HPA:CAB011232
MIM:109610 neXtProt:NX_P30536 PharmGKB:PA25473 eggNOG:COG3476
InParanoid:P30536 KO:K05770 OMA:ARQMGWA PhylomeDB:P30536
BindingDB:P30536 ChEMBL:CHEMBL5742 ChiTaRS:TSPO DrugBank:DB01178
DrugBank:DB01594 DrugBank:DB01559 GenomeRNAi:706 NextBio:2874
ArrayExpress:P30536 Bgee:P30536 CleanEx:HS_TSPO
Genevestigator:P30536 GermOnline:ENSG00000100300 Uniprot:P30536
Length = 169
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 36/102 (35%), Positives = 55/102 (53%)
Query: 78 TLSSSFFMSLAAWLVWAD-GGFHARSDSLL-LYVAQVSLSVLWDPLVLVTGAACLG--LV 133
TL S+ M ++LVW + GGF ++ L LY Q++L+ W P+ GA +G LV
Sbjct: 55 TLYSA--MGYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFF--GARQMGWALV 110
Query: 134 FCVAHFGTLVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNY 175
+ G A ++ +V+P A L+ P LAW+ F T +NY
Sbjct: 111 DLLLVSGAAAATTVAWYQVSPLAARLLYPYLAWLAFTTTLNY 152
>RGD|2228 [details] [associations]
symbol:Tspo "translocator protein" species:10116 "Rattus
norvegicus" [GO:0005497 "androgen binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=ISO;IDA;TAS] [GO:0005741 "mitochondrial outer membrane"
evidence=IDA] [GO:0006694 "steroid biosynthetic process"
evidence=IMP] [GO:0006811 "ion transport" evidence=IDA] [GO:0006821
"chloride transport" evidence=IDA] [GO:0006950 "response to stress"
evidence=IEP] [GO:0007568 "aging" evidence=IEP] [GO:0008347 "glial
cell migration" evidence=IDA] [GO:0008503 "benzodiazepine receptor
activity" evidence=IDA] [GO:0010042 "response to manganese ion"
evidence=IEP] [GO:0010266 "response to vitamin B1" evidence=IEP]
[GO:0010940 "positive regulation of necrotic cell death"
evidence=IMP] [GO:0014012 "peripheral nervous system axon
regeneration" evidence=IEP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030325 "adrenal gland development" evidence=IEP]
[GO:0032570 "response to progesterone stimulus" evidence=IEP]
[GO:0032720 "negative regulation of tumor necrosis factor production"
evidence=IDA] [GO:0033574 "response to testosterone stimulus"
evidence=IEP] [GO:0042493 "response to drug" evidence=IEP]
[GO:0043065 "positive regulation of apoptotic process" evidence=IMP]
[GO:0045019 "negative regulation of nitric oxide biosynthetic
process" evidence=IDA] [GO:0048265 "response to pain" evidence=IEP]
[GO:0048266 "behavioral response to pain" evidence=IMP] [GO:0048678
"response to axon injury" evidence=IEP] [GO:0050810 "regulation of
steroid biosynthetic process" evidence=IMP] [GO:0051901 "positive
regulation of mitochondrial depolarization" evidence=IDA] [GO:0051928
"positive regulation of calcium ion transport" evidence=IMP]
[GO:0060242 "contact inhibition" evidence=IDA] [GO:0060252 "positive
regulation of glial cell proliferation" evidence=IDA] [GO:0060253
"negative regulation of glial cell proliferation" evidence=IDA]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=IEP]
[GO:0071294 "cellular response to zinc ion" evidence=IEP] [GO:0071476
"cellular hypotonic response" evidence=IEP] [GO:2000379 "positive
regulation of reactive oxygen species metabolic process"
evidence=IDA] InterPro:IPR004307 Pfam:PF03073 PIRSF:PIRSF005859
RGD:2228 GO:GO:0016021 GO:GO:0005741 GO:GO:0006694 GO:GO:0030325
GO:GO:0042493 GO:GO:0050810 GO:GO:0007568 GO:GO:0048266 GO:GO:0071222
GO:GO:0043065 GO:GO:2000379 GO:GO:0032720 GO:GO:0010042 GO:GO:0032570
GO:GO:0033574 GO:GO:0071294 GO:GO:0051901 GO:GO:0045019 GO:GO:0005497
GO:GO:0051928 GO:GO:0010940 GO:GO:0014012 GO:GO:0008347 GO:GO:0071476
GO:GO:0060252 GO:GO:0060253 GO:GO:0008503 GO:GO:0010266 GO:GO:0060242
HOGENOM:HOG000224659 HOVERGEN:HBG001296 OrthoDB:EOG4HMJBC
PANTHER:PTHR10057 GeneTree:ENSGT00390000012980 CTD:706 eggNOG:COG3476
KO:K05770 OMA:ARQMGWA EMBL:J05122 EMBL:M84221 IPI:IPI00211128
PIR:JC1393 RefSeq:NP_036647.1 UniGene:Rn.1820 UniGene:Rn.229367
STRING:P16257 Ensembl:ENSRNOT00000014089 GeneID:24230 KEGG:rno:24230
UCSC:RGD:2228 InParanoid:P16257 BindingDB:P16257 ChEMBL:CHEMBL4552
NextBio:602675 Genevestigator:P16257 GermOnline:ENSRNOG00000010549
Uniprot:P16257
Length = 169
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 35/102 (34%), Positives = 55/102 (53%)
Query: 78 TLSSSFFMSLAAWLVWAD-GGFHARSDSLL-LYVAQVSLSVLWDPLVLVTGAACLG--LV 133
TL S+ M ++++W + GGF + L LY Q++L+ W P+ GA +G LV
Sbjct: 55 TLYSA--MGYGSYIIWKELGGFTEEAMVPLGLYTGQLALNWAWPPIFF--GARQMGWALV 110
Query: 134 FCVAHFGTLVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNY 175
+ G A ++ +V+P A L+ P LAW+ F TM+NY
Sbjct: 111 DLMLVSGVATATTLAWHRVSPPAARLLYPYLAWLAFATMLNY 152
>UNIPROTKB|P30535 [details] [associations]
symbol:TSPO "Translocator protein" species:9913 "Bos
taurus" [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR004307
Pfam:PF03073 PIRSF:PIRSF005859 GO:GO:0016021 GO:GO:0031966
HOGENOM:HOG000224659 HOVERGEN:HBG001296 OrthoDB:EOG4HMJBC
PANTHER:PTHR10057 GeneTree:ENSGT00390000012980 CTD:706
eggNOG:COG3476 KO:K05770 EMBL:M64520 EMBL:BC102933 IPI:IPI00712420
PIR:A39473 RefSeq:NP_786970.1 UniGene:Bt.49341 STRING:P30535
PRIDE:P30535 Ensembl:ENSBTAT00000024060 GeneID:281033
KEGG:bta:281033 InParanoid:P30535 BindingDB:P30535
ChEMBL:CHEMBL2419 NextBio:20805120 Uniprot:P30535
Length = 169
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 78 TLSSSFFMSLAAWLVWAD-GGFHARSDSLL-LYVAQVSLSVLWDPLVLVTGAACLGLVFC 135
TL S+ M ++++W + GGF + L LY Q++L+ W PL T LV
Sbjct: 55 TLYSA--MGYGSYMIWKELGGFSKEAVVPLGLYAGQLALNWAWPPLFFGTRQMGWALVDL 112
Query: 136 VAHFGTLVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNYKL 177
+ G A ++ +V+P A L+ P LAW+ F M+NY++
Sbjct: 113 LLTGGMAAATAMAWHQVSPPAACLLYPYLAWLAFAGMLNYRM 154
>UNIPROTKB|Q6UN27 [details] [associations]
symbol:TSPO "Translocator protein" species:9823 "Sus
scrofa" [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR004307
Pfam:PF03073 PIRSF:PIRSF005859 GO:GO:0016021 GO:GO:0031966
HOGENOM:HOG000224659 HOVERGEN:HBG001296 OrthoDB:EOG4HMJBC
PANTHER:PTHR10057 CTD:706 eggNOG:COG3476 KO:K05770 EMBL:AY366497
RefSeq:NP_998918.1 UniGene:Ssc.5936 GeneID:396592 KEGG:ssc:396592
Uniprot:Q6UN27
Length = 169
Score = 118 (46.6 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 35/102 (34%), Positives = 53/102 (51%)
Query: 78 TLSSSFFMSLAAWLVWAD-GGFHARSDSLL-LYVAQVSLSVLWDPLVLVTGAACLG--LV 133
TL S+ M ++++W + GGF + L LY Q++L+ W PL GA +G LV
Sbjct: 55 TLYSA--MGYGSYMIWKELGGFSEEAVVPLGLYAGQLALNWAWPPLFF--GARQMGWALV 110
Query: 134 FCVAHFGTLVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNY 175
V G A ++ +V+P A L+ P LAW+ F +NY
Sbjct: 111 DLVLTGGVAAATAVAWYQVSPLAARLLYPYLAWLAFAATLNY 152
>UNIPROTKB|F1SJR8 [details] [associations]
symbol:TSPO "Translocator protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR004307
Pfam:PF03073 PIRSF:PIRSF005859 GO:GO:0016021 GO:GO:0005739
PANTHER:PTHR10057 GeneTree:ENSGT00390000012980 OMA:ARQMGWA
EMBL:FP340367 Ensembl:ENSSSCT00000000035 ArrayExpress:F1SJR8
Uniprot:F1SJR8
Length = 169
Score = 117 (46.2 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 35/102 (34%), Positives = 53/102 (51%)
Query: 78 TLSSSFFMSLAAWLVWAD-GGFHARSDSLL-LYVAQVSLSVLWDPLVLVTGAACLG--LV 133
TL S+ M ++++W + GGF + L LY Q++L+ W PL GA +G LV
Sbjct: 55 TLYSA--MGYGSYMIWKELGGFSEEAVVPLGLYAGQLALNWAWPPLFF--GARQMGWALV 110
Query: 134 FCVAHFGTLVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNY 175
V G A ++ +V+P A L+ P LAW+ F +NY
Sbjct: 111 DLVLTGGLAAATAVAWYQVSPLAARLLYPYLAWLAFAATLNY 152
>UNIPROTKB|F1NZA2 [details] [associations]
symbol:TSPO "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR004307
Pfam:PF03073 PIRSF:PIRSF005859 GO:GO:0016021 GO:GO:0005739
PANTHER:PTHR10057 GeneTree:ENSGT00390000012980 OMA:ARQMGWA
EMBL:AADN02006695 IPI:IPI00588317 Ensembl:ENSGALT00000022911
Uniprot:F1NZA2
Length = 167
Score = 116 (45.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 32/102 (31%), Positives = 52/102 (50%)
Query: 78 TLSSSFFMSLAAWLVWAD-GGFHARSDSLL-LYVAQVSLSVLWDPLVLVTGAACLGLVFC 135
TL +S M ++LVW + GGF ++ L LY Q++L+ W P+ GL
Sbjct: 58 TLYTS--MGYGSYLVWKELGGFTEKAAVPLGLYAGQLALNWAWTPIFFGAHKMGWGLATL 115
Query: 136 VAHFGTLVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNYKL 177
+ GT A S+ +N A L+ P LAW+ +++NY++
Sbjct: 116 LLTTGTATATTASWYHINRTAAYLMVPYLAWLTMASVLNYRI 157
>MGI|MGI:88222 [details] [associations]
symbol:Tspo "translocator protein" species:10090 "Mus
musculus" [GO:0005497 "androgen binding" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0005741 "mitochondrial outer
membrane" evidence=ISO] [GO:0006694 "steroid biosynthetic process"
evidence=ISO] [GO:0006811 "ion transport" evidence=ISO] [GO:0006821
"chloride transport" evidence=ISO] [GO:0008347 "glial cell
migration" evidence=ISO] [GO:0008503 "benzodiazepine receptor
activity" evidence=ISO] [GO:0010940 "positive regulation of
necrotic cell death" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0045019 "negative regulation
of nitric oxide biosynthetic process" evidence=ISO] [GO:0048266
"behavioral response to pain" evidence=ISO] [GO:0050810 "regulation
of steroid biosynthetic process" evidence=ISO] [GO:0051901
"positive regulation of mitochondrial depolarization" evidence=ISO]
[GO:0051928 "positive regulation of calcium ion transport"
evidence=ISO] [GO:0060242 "contact inhibition" evidence=ISO]
[GO:0060252 "positive regulation of glial cell proliferation"
evidence=ISO] [GO:0060253 "negative regulation of glial cell
proliferation" evidence=ISO] [GO:2000379 "positive regulation of
reactive oxygen species metabolic process" evidence=ISO]
InterPro:IPR004307 Pfam:PF03073 PIRSF:PIRSF005859 MGI:MGI:88222
GO:GO:0016021 GO:GO:0005739 GO:GO:0005741 GO:GO:0006694
GO:GO:0030325 GO:GO:0042493 GO:GO:0050810 GO:GO:0007568
GO:GO:0048266 GO:GO:0071222 GO:GO:0043065 GO:GO:2000379
GO:GO:0032720 GO:GO:0010042 GO:GO:0032570 GO:GO:0033574
GO:GO:0071294 GO:GO:0051901 GO:GO:0045019 GO:GO:0005497
GO:GO:0051928 GO:GO:0010940 GO:GO:0014012 GO:GO:0008347
GO:GO:0071476 GO:GO:0060252 GO:GO:0060253 GO:GO:0008503
GO:GO:0010266 GO:GO:0060242 HOGENOM:HOG000224659 HOVERGEN:HBG001296
OrthoDB:EOG4HMJBC PANTHER:PTHR10057 CTD:706 eggNOG:COG3476
KO:K05770 OMA:ARQMGWA EMBL:L17306 EMBL:D21207 EMBL:U12419
IPI:IPI00120283 PIR:A53405 PIR:I57953 RefSeq:NP_033905.3
UniGene:Mm.1508 STRING:P50637 PaxDb:P50637 PRIDE:P50637
Ensembl:ENSMUST00000047419 GeneID:12257 KEGG:mmu:12257
InParanoid:P50637 BindingDB:P50637 ChEMBL:CHEMBL2149 NextBio:280682
Bgee:P50637 CleanEx:MM_TSPO Genevestigator:P50637
GermOnline:ENSMUSG00000041736 Uniprot:P50637
Length = 169
Score = 115 (45.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 78 TLSSSFFMSLAAWLVWAD-GGFHARSDSLL---LYVAQVSLSVLWDPLVLVTGAACLG-- 131
TL S+ M +++VW + GGF D+++ LY Q++L+ W P+ GA +G
Sbjct: 55 TLYSA--MGYGSYIVWKELGGF--TEDAMVPLGLYTGQLALNWAWPPIFF--GARQMGWA 108
Query: 132 LVFCVAHFGTLVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNY 175
L + G A ++ +V+P A L+ P LAW+ F T++NY
Sbjct: 109 LADLLLVSGVATATTLAWHRVSPPAARLLYPYLAWLAFATVLNY 152
>UNIPROTKB|E2RQH5 [details] [associations]
symbol:TSPO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR004307
Pfam:PF03073 PIRSF:PIRSF005859 GO:GO:0016021 GO:GO:0005739
PANTHER:PTHR10057 GeneTree:ENSGT00390000012980 CTD:706 KO:K05770
OMA:ARQMGWA EMBL:AAEX03007268 RefSeq:XP_531704.2
Ensembl:ENSCAFT00000001416 GeneID:474475 KEGG:cfa:474475
NextBio:20850483 Uniprot:E2RQH5
Length = 169
Score = 112 (44.5 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 33/100 (33%), Positives = 50/100 (50%)
Query: 78 TLSSSFFMSLAAWLVWAD-GGFHARSDSLL-LYVAQVSLSVLWDPLVLVTGAACLGLVFC 135
TL S+ M +++VW + GGF + L LY Q++L+ W PL T LV
Sbjct: 55 TLYSA--MGYGSYMVWKELGGFSEEAVVPLGLYAGQLALNWAWPPLFFGTRQMGWALVDL 112
Query: 136 VAHFGTLVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNY 175
+ G A ++ +V+P A L+ P LAW+ F +NY
Sbjct: 113 LLTGGLAGATAVAWHRVSPPAARLLYPYLAWLAFAAALNY 152
>UNIPROTKB|F1RVN5 [details] [associations]
symbol:TSPO2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015485 "cholesterol binding" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR004307 Pfam:PF03073
PIRSF:PIRSF005859 GO:GO:0005783 GO:GO:0016021 GO:GO:0015485
OMA:VMGYASY PANTHER:PTHR10057 GeneTree:ENSGT00390000012980
EMBL:CU468451 Ensembl:ENSSSCT00000001785 Uniprot:F1RVN5
Length = 171
Score = 107 (42.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 31/93 (33%), Positives = 49/93 (52%)
Query: 88 AAWLVWAD-GGFHARSDSLLLYVAQVSLSVLWDPLVL--VTGAACLGLVFCVAHFGTLVA 144
A++LVW + GG +L L + V L+V W L+L V +A L L+ + FG +V+
Sbjct: 60 ASYLVWKELGGGLGWPLALPLGLYSVQLAVSWTVLILFFVAHSAGLALLHLLLLFGLVVS 119
Query: 145 CYKSFEKVNPFAKDLVKPCLAWMGFLTMVNYKL 177
+ +N A L+ P LAW+ T + Y+L
Sbjct: 120 MALIWHPINKLAALLLLPYLAWLTVTTSITYRL 152
>UNIPROTKB|E2RDM9 [details] [associations]
symbol:TSPO2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015485 "cholesterol binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR004307
Pfam:PF03073 PIRSF:PIRSF005859 GO:GO:0005783 GO:GO:0016021
GO:GO:0015485 CTD:222642 OMA:VMGYASY PANTHER:PTHR10057
GeneTree:ENSGT00390000012980 EMBL:AAEX03008323 RefSeq:XP_538908.3
Ensembl:ENSCAFT00000002469 GeneID:481787 KEGG:cfa:481787
NextBio:20856525 Uniprot:E2RDM9
Length = 172
Score = 107 (42.7 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 31/98 (31%), Positives = 47/98 (47%)
Query: 83 FFMSLAAWLVWAD-GGFHARSDSLLLYVAQVSLSVLWDPLVLVTGAAC--LGLVFCVAHF 139
F M A++LVW D GG R +L L + V L+V W L+ A L L+ + +
Sbjct: 55 FVMGYASYLVWKDLGGGFGRPLALPLGLYAVQLAVSWAVLIFFFAAHAHGLALLHMLLLY 114
Query: 140 GTLVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNYKL 177
G +V+ + +N A L+ P LAW+ + Y L
Sbjct: 115 GLVVSTALIWHPINKLAAVLLLPYLAWLTVTASIAYHL 152
>ZFIN|ZDB-GENE-041010-125 [details] [associations]
symbol:tspo "translocator protein" species:7955
"Danio rerio" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0060319
"primitive erythrocyte differentiation" evidence=IMP]
InterPro:IPR004307 Pfam:PF03073 PIRSF:PIRSF005859
ZFIN:ZDB-GENE-041010-125 GO:GO:0016021 GO:GO:0060319 EMBL:CU463231
HOGENOM:HOG000224659 HOVERGEN:HBG001296 OrthoDB:EOG4HMJBC
PANTHER:PTHR10057 GeneTree:ENSGT00390000012980 CTD:706
eggNOG:COG3476 KO:K05770 OMA:ARQMGWA EMBL:CU855953 EMBL:BC083388
IPI:IPI00484304 RefSeq:NP_001006032.1 UniGene:Dr.84635
STRING:Q5XJB6 Ensembl:ENSDART00000032603 GeneID:450011
KEGG:dre:450011 InParanoid:Q5XJB6 NextBio:20832994 Uniprot:Q5XJB6
Length = 162
Score = 100 (40.3 bits), Expect = 0.00047, P = 0.00047
Identities = 28/95 (29%), Positives = 48/95 (50%)
Query: 85 MSLAAWLVWAD-GGFHARSDSLL---LYVAQVSLSVLWDPLVLVTGAACLGLVFCVAHFG 140
M ++LVW + GGF D+++ LY Q++L+ W P+ L L+ + G
Sbjct: 57 MGYGSYLVWKELGGF--TQDAMVPLGLYGLQLALNWAWTPIFFGAHKIQLALIELLLMSG 114
Query: 141 TLVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNY 175
T+ A S+ ++ A L+ P +AW+ T +NY
Sbjct: 115 TVAATMVSWYPISRTATLLMVPYMAWLCVATSLNY 149
>MGI|MGI:1917276 [details] [associations]
symbol:Tspo2 "translocator protein 2" species:10090 "Mus
musculus" [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0015485 "cholesterol binding"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR004307
Pfam:PF03073 PIRSF:PIRSF005859 MGI:MGI:1917276 GO:GO:0005783
GO:GO:0016021 GO:GO:0005789 GO:GO:0006810 GO:GO:0015485 CTD:222642
eggNOG:NOG282509 HOGENOM:HOG000224659 HOVERGEN:HBG001296
OMA:VMGYASY OrthoDB:EOG4HMJBC PANTHER:PTHR10057 EMBL:AK011003
EMBL:BC104344 EMBL:BC104345 IPI:IPI00269469 RefSeq:NP_081568.1
UniGene:Mm.22613 PhosphoSite:Q9CRZ8 PRIDE:Q9CRZ8
Ensembl:ENSMUST00000024794 GeneID:70026 KEGG:mmu:70026
UCSC:uc008cxy.1 GeneTree:ENSGT00390000012980 InParanoid:Q9CRZ8
NextBio:330853 Bgee:Q9CRZ8 CleanEx:MM_BZRPL1 Genevestigator:Q9CRZ8
Uniprot:Q9CRZ8
Length = 162
Score = 99 (39.9 bits), Expect = 0.00064, P = 0.00064
Identities = 32/98 (32%), Positives = 49/98 (50%)
Query: 85 MSLAAWLVWAD--GGFH-ARSDSLLLYVAQVSLSVLWDPLVLVTGAACLGLVFC--VAHF 139
M A++LVW + GGF + L LY Q++LS W LVL A GL + +
Sbjct: 56 MGYASYLVWKELGGGFRWPLALPLGLYSFQLALS--WTFLVLFLAADSPGLALLDLLLLY 113
Query: 140 GTLVACYKSFEKVNPFAKDLVKPCLAWMGFLTMVNYKL 177
G + + ++ +N A L+ P LAW+ T + Y+L
Sbjct: 114 GLVASLVFIWQPINKLAALLLLPYLAWLTVTTAITYRL 151
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.136 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 180 168 0.00079 108 3 11 22 0.43 31
31 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 576 (61 KB)
Total size of DFA: 155 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.56u 0.12s 14.68t Elapsed: 00:00:00
Total cpu time: 14.56u 0.12s 14.68t Elapsed: 00:00:00
Start: Sat May 11 05:54:33 2013 End: Sat May 11 05:54:33 2013