BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042876
(179 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 94/181 (51%), Gaps = 12/181 (6%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK-P 65
LDW +R G A L+YLH C P I+HRD+ + N+LLD E+EA V DFG+AK +
Sbjct: 136 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 195
Query: 66 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDF---------L 116
D GT G++APE T K +EK DV+ +GV+ LE+I G+ D +
Sbjct: 196 DXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 255
Query: 117 XXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQ 176
L + +L+ ++D L + E++ +++VA C SP RP M V +
Sbjct: 256 LLDWVKGLLKEKKLEALVDVDLQGNYKD--EEVEQLIQVALLCTQSSPMERPKMSEVVRM 313
Query: 177 L 177
L
Sbjct: 314 L 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 106 bits (264), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 12/181 (6%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK-P 65
LDW +R G A L+YLH C P I+HRD+ + N+LLD E+EA V DFG+AK +
Sbjct: 128 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187
Query: 66 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDF---------L 116
D G G++APE T K +EK DV+ +GV+ LE+I G+ D +
Sbjct: 188 DXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247
Query: 117 XXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQ 176
L + +L+ ++D L + E++ +++VA C SP RP M V +
Sbjct: 248 LLDWVKGLLKEKKLEALVDVDLQGNYKD--EEVEQLIQVALLCTQSSPMERPKMSEVVRM 305
Query: 177 L 177
L
Sbjct: 306 L 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA 60
D + W QR+ G A L YLH I+HRD+ S N+LLD + + DFGI+
Sbjct: 130 DLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGIS 186
Query: 61 KFLKPDSSNWTEFA----GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKH----- 111
K K + T GT GY+ PE ++TEK DVYSFGV+ EV+ +
Sbjct: 187 K--KGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS 244
Query: 112 -PRDFLXXXX-XXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
PR+ + + + +L++++DP L R E L A CL S E RP+
Sbjct: 245 LPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRP--ESLRKFGDTAVKCLALSSEDRPS 302
Query: 170 MKIVSQQL 177
M V +L
Sbjct: 303 MGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA 60
D + W QR+ G A L YLH I+HRD+ S N+LLD + + DFGI+
Sbjct: 130 DLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGIS 186
Query: 61 KFLKPDSSNWTEFA----GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKH----- 111
K K T GT GY+ PE ++TEK DVYSFGV+ EV+ +
Sbjct: 187 K--KGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS 244
Query: 112 -PRDFLXXXX-XXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
PR+ + + + +L++++DP L R E L A CL S E RP+
Sbjct: 245 LPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRP--ESLRKFGDTAVKCLALSSEDRPS 302
Query: 170 MKIVSQQL 177
M V +L
Sbjct: 303 MGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 89/181 (49%), Gaps = 17/181 (9%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK-- 64
L W R +G A+ +++LH + +HRD+ S N+LLD + A ++DFG+A+ +
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 65 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKG-------KHPRDFLX 117
+ + GT Y+APE A +IT K D+YSFGV+ LE+I G + P+ L
Sbjct: 187 AQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245
Query: 118 XXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
D + A S SV+ ++ VA CL+E RP +K V Q L
Sbjct: 246 IKEEIEDEEKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQLL 301
Query: 178 R 178
+
Sbjct: 302 Q 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 17/181 (9%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK-- 64
L W R +G A+ +++LH + +HRD+ S N+LLD + A ++DFG+A+ +
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 65 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKG-------KHPRDFLX 117
+ GT Y+APE A +IT K D+YSFGV+ LE+I G + P+ L
Sbjct: 187 AQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245
Query: 118 XXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
D + A S SV+ ++ VA CL+E RP +K V Q L
Sbjct: 246 IKEEIEDEEKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQLL 301
Query: 178 R 178
+
Sbjct: 302 Q 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 17/181 (9%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD 66
L W R +G A+ +++LH + +HRD+ S N+LLD + A ++DFG+A+ +
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 67 SSN--WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKG-------KHPRDFLX 117
+ GT Y+APE A +IT K D+YSFGV+ LE+I G + P+ L
Sbjct: 181 AQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 239
Query: 118 XXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
D + A S SV+ ++ VA CL+E RP +K V Q L
Sbjct: 240 IKEEIEDEEKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQLL 295
Query: 178 R 178
+
Sbjct: 296 Q 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK-- 64
L W R +G A+ +++LH + +HRD+ S N+LLD + A ++DFG+A+ +
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 65 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKG-------KHPRDFLX 117
+ GT Y APE A +IT K D+YSFGV+ LE+I G + P+ L
Sbjct: 178 AQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 236
Query: 118 XXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
D + A S SV+ + VA CL+E RP +K V Q L
Sbjct: 237 IKEEIEDEEKTIEDYIDKKXNDADSTSVE----AXYSVASQCLHEKKNKRPDIKKVQQLL 292
Query: 178 R 178
+
Sbjct: 293 Q 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK 61
A ++LD +R++ VA ++YLH+ PPIVHRDL S NLL+D +Y V DFG+++
Sbjct: 129 GAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSR 187
Query: 62 FLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXX 121
AGT ++APE+ EK DVYSFGV+ E+ + P L
Sbjct: 188 LKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV 247
Query: 122 XXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
+ RL P R++ ++ +I++ C P RP+ + LR
Sbjct: 248 ------VAAVGFKCKRLEIP-RNLNPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK 61
A ++LD +R++ VA ++YLH+ PPIVHR+L S NLL+D +Y V DFG+++
Sbjct: 129 GAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187
Query: 62 FLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXX 121
+ AGT ++APE+ EK DVYSFGV+ E+ + P L
Sbjct: 188 LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV 247
Query: 122 XXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
+ RL P R++ ++ +I++ C P RP+ + LR
Sbjct: 248 ------VAAVGFKCKRLEIP-RNLNPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 76/177 (42%), Gaps = 28/177 (15%)
Query: 9 WSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFL----- 63
WSQR++ K +A ++YLH I+HRDL+S N L+ VADFG+A+ +
Sbjct: 107 WSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163
Query: 64 ---------KPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPR 113
KPD G ++APE+ EK DV+SFG++ E+I +
Sbjct: 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADP 223
Query: 114 DFLXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
D+L LN LD P P S + C + PE RP+
Sbjct: 224 DYLPRTMDFGLNVRGFLDRYCPPNCPP----------SFFPITVRCCDLDPEKRPSF 270
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 20/174 (11%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK 61
+ + L+ SQ + V + +++L F +HRDL+++N L+D + V+DFG+ +
Sbjct: 96 SHGKGLEPSQLLEMCYDVCEGMAFLESHQF---IHRDLAARNCLVDRDLCVKVSDFGMTR 152
Query: 62 FLKPD---SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLX 117
++ D SS T+F + APE+ + K + K DV++FG+L EV GK P D
Sbjct: 153 YVLDDQYVSSVGTKFPVKWS--APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT 210
Query: 118 XXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
N+++ L RL P + +I ++ +SC +E PE RPT +
Sbjct: 211 -------NSEVVLKVSQGHRLYRPHLASD----TIYQIMYSCWHELPEKRPTFQ 253
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD 66
+D Q + AL +LH + ++HRD+ S N+LL ++ + DFG + P+
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169
Query: 67 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
S +E GT ++APE+ K D++S G++A+E+I+G+ P
Sbjct: 170 QSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA--------HVADFGIAKFLKPDSSNW 70
+A ++YLH + PI+HRDL S N+L+ + E + DFG+A+ +
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK-- 171
Query: 71 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIEL 130
AG Y ++APE+ ++ DV+S+GVL E++ G+ P + + +
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP---FRGIDGLAVAYGVAM 228
Query: 131 DEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
+++ LP PS + K+ C N P SRP+ + QL
Sbjct: 229 NKL---ALPIPSTCPE----PFAKLMEDCWNPDPHSRPSFTNILDQL 268
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD 66
+D Q + AL +LH + ++HRD+ S N+LL ++ + DFG + P+
Sbjct: 114 MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 170
Query: 67 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
S + GT ++APE+ K D++S G++A+E+I+G+ P
Sbjct: 171 QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD 66
+D Q + AL +LH + ++HRD+ S N+LL ++ + DFG + P+
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169
Query: 67 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
S + GT ++APE+ K D++S G++A+E+I+G+ P
Sbjct: 170 QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD 66
+D Q + AL +LH + ++HRD+ S N+LL ++ + DFG + P+
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169
Query: 67 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
S + GT ++APE+ K D++S G++A+E+I+G+ P
Sbjct: 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK-FLKPDSSNWTEFAGTYGYV 80
AL+YLH I++RDL N+LLD E + D+G+ K L+P + T F GT Y+
Sbjct: 165 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYI 220
Query: 81 APELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNT-DIELDEMLDPRLP 139
APE+ D ++ GVL E++ G+ P D + NT D +L+ ++
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 280
Query: 140 APSRSVQEKLISIVKVAFSCLNESPESR 167
P RS+ K S++K S LN+ P+ R
Sbjct: 281 IP-RSLSVKAASVLK---SFLNKDPKER 304
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 18/170 (10%)
Query: 4 AQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFL 63
A D Q +K + L YLH + +HRD+ + N+LL + + +ADFG+A L
Sbjct: 114 AGPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQL 170
Query: 64 KPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXX 123
F GT ++APE+ K D++S G+ A+E+ KG+ P
Sbjct: 171 TDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP----------- 219
Query: 124 LNTDIELDEM--LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
N+D+ + L P+ P+ V + S + +CLN+ P RPT K
Sbjct: 220 -NSDMHPMRVLFLIPKNNPPTL-VGDFTKSFKEFIDACLNKDPSFRPTAK 267
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD 66
LD +Q ++ + L YLH + +HRD+ + N+LL E +ADFG+A L
Sbjct: 116 LDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172
Query: 67 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNT 126
F GT ++APE+ K D++S G+ A+E+ +G+ P L L
Sbjct: 173 QIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL-- 230
Query: 127 DIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
+ P + + L V+ +CLN+ P RPT K
Sbjct: 231 ------IPKNNPPTLEGNYSKPLKEFVE---ACLNKEPSFRPTAK 266
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD 66
LD +Q ++ + L YLH + +HRD+ + N+LL E +ADFG+A L
Sbjct: 101 LDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
Query: 67 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNT 126
F GT ++APE+ K D++S G+ A+E+ +G+ P L
Sbjct: 158 QIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL---- 213
Query: 127 DIELDEMLDPRLPAPS--RSVQEKLISIVKVAFSCLNESPESRPTMK 171
L P+ P+ + + L V+ +CLN+ P RPT K
Sbjct: 214 ------FLIPKNNPPTLEGNYSKPLKEFVE---ACLNKEPSFRPTAK 251
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD 66
LD +Q ++ + L YLH + +HRD+ + N+LL E +ADFG+A L
Sbjct: 101 LDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
Query: 67 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNT 126
F GT ++APE+ K D++S G+ A+E+ +G+ P L
Sbjct: 158 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL---- 213
Query: 127 DIELDEMLDPRLPAPS--RSVQEKLISIVKVAFSCLNESPESRPTMK 171
L P+ P+ + + L V+ +CLN+ P RPT K
Sbjct: 214 ------FLIPKNNPPTLEGNYSKPLKEFVE---ACLNKEPSFRPTAK 251
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD 66
LD +Q ++ + L YLH + +HRD+ + N+LL E +ADFG+A L
Sbjct: 121 LDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 177
Query: 67 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNT 126
F GT ++APE+ K D++S G+ A+E+ +G+ P L
Sbjct: 178 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL---- 233
Query: 127 DIELDEMLDPRLPAPS--RSVQEKLISIVKVAFSCLNESPESRPTMK 171
L P+ P+ + + L V+ +CLN+ P RPT K
Sbjct: 234 ------FLIPKNNPPTLEGNYSKPLKEFVE---ACLNKEPSFRPTAK 271
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK-FLKPDSSNWTEFAGTYGYV 80
AL+YLH I++RDL N+LLD E + D+G+ K L+P + + F GT Y+
Sbjct: 133 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYI 188
Query: 81 APELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNT-DIELDEMLDPRLP 139
APE+ D ++ GVL E++ G+ P D + NT D +L+ ++
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 248
Query: 140 APSRSVQEKLISIVKVAFSCLNESPESR 167
P RS+ K S++K S LN+ P+ R
Sbjct: 249 IP-RSMSVKAASVLK---SFLNKDPKER 272
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK-FLKPDSSNWTEFAGTYGYV 80
AL+YLH I++RDL N+LLD E + D+G+ K L+P + + F GT Y+
Sbjct: 122 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYI 177
Query: 81 APELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNT-DIELDEMLDPRLP 139
APE+ D ++ GVL E++ G+ P D + NT D +L+ ++
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 237
Query: 140 APSRSVQEKLISIVKVAFSCLNESPESR 167
P RS+ K S++K S LN+ P+ R
Sbjct: 238 IP-RSLSVKAASVLK---SFLNKDPKER 261
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNW 70
Q + ++G+A + YL + VHRDL+++N+L++ V+DFG+++FL+ +SS+
Sbjct: 119 QLVGMLRGIASGMRYLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 175
Query: 71 TEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
TE + G + APE K T D +S+G++ EV+ G+ P + +
Sbjct: 176 TETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP--YWDMSNQDVI 233
Query: 125 NTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
N IE D L P P+ S+ ++ C + +RP V L
Sbjct: 234 NA-IEQDYRLPPPPDCPT--------SLHQLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD 66
+D Q + AL +LH + ++HR++ S N+LL ++ + DFG + P+
Sbjct: 114 MDEGQIAAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE 170
Query: 67 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
S + GT ++APE+ K D++S G++A+E+I+G+ P
Sbjct: 171 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK-FLKPDSSNWTEFAGTYGYV 80
AL+YLH I++RDL N+LLD E + D+G+ K L+P + + F GT Y+
Sbjct: 118 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYI 173
Query: 81 APELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNT-DIELDEMLDPRLP 139
APE+ D ++ GVL E++ G+ P D + NT D +L+ ++
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 233
Query: 140 APSRSVQEKLISIVKVAFSCLNESPESR 167
P RS+ K S++K S LN+ P+ R
Sbjct: 234 IP-RSLSVKAASVLK---SFLNKDPKER 257
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 108 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 162
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
TE GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 163 RTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNW 70
Q + ++G+A + YL + VHRDL+++N+L++ V+DFG+++FL+ D+S+
Sbjct: 136 QLVGMLRGIAAGMKYLADMNY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 192
Query: 71 TEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
T + G + APE K T DV+S+G++ EV+ G+ P + +
Sbjct: 193 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMTNQDVI 250
Query: 125 NTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
N IE D L P + PS ++ ++ C + RP + L
Sbjct: 251 NA-IEQDYRLPPPMDCPS--------ALHQLMLDCWQKDRNHRPKFGQIVNTL 294
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD---SSNWTEFAG 75
V + ++YL C ++HRDL+++N L+ V+DFG+ +F+ D SS T+F
Sbjct: 115 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP- 170
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLXXXXXXXLNTDIELDEML 134
+ +PE+ + + K DV+SFGVL EV +GK P + N+++ D
Sbjct: 171 -VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDIST 222
Query: 135 DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
RL P + + ++ C E PE RP + +QL
Sbjct: 223 GFRLYKPRLASTH----VYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD---SSNWTEFAG 75
V + ++YL C ++HRDL+++N L+ V+DFG+ +F+ D SS T+F
Sbjct: 113 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP- 168
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLXXXXXXXLNTDIELDEML 134
+ +PE+ + + K DV+SFGVL EV +GK P + N+++ D
Sbjct: 169 -VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDIST 220
Query: 135 DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
RL P + + ++ C E PE RP + +QL
Sbjct: 221 GFRLYKPRLASTH----VYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD---SSNWTEFAG 75
V + ++YL C ++HRDL+++N L+ V+DFG+ +F+ D SS T+F
Sbjct: 112 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP- 167
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLXXXXXXXLNTDIELDEML 134
+ +PE+ + + K DV+SFGVL EV +GK P + N+++ D
Sbjct: 168 -VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDIST 219
Query: 135 DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
RL P + + ++ C E PE RP + +QL
Sbjct: 220 GFRLYKPRLASTH----VYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD---SSNWTEFAG 75
V + ++YL C ++HRDL+++N L+ V+DFG+ +F+ D SS T+F
Sbjct: 110 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP- 165
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLXXXXXXXLNTDIELDEML 134
+ +PE+ + + K DV+SFGVL EV +GK P + N+++ D
Sbjct: 166 -VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDIST 217
Query: 135 DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
RL P + + ++ C E PE RP + +QL
Sbjct: 218 GFRLYKPRLASTH----VYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD---SSNWTEFAG 75
V + ++YL C ++HRDL+++N L+ V+DFG+ +F+ D SS T+F
Sbjct: 132 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP- 187
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLXXXXXXXLNTDIELDEML 134
+ +PE+ + + K DV+SFGVL EV +GK P + N+++ D
Sbjct: 188 -VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDIST 239
Query: 135 DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
RL P + + ++ C E PE RP + +QL
Sbjct: 240 GFRLYKPRLASTH----VYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 108 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 162
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T+ GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 163 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 109 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 163
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T+ GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 108 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 162
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T+ GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 163 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD 66
LD S ++ V + L YLH + +HRD+ + N+LL + +ADFG++ FL
Sbjct: 118 LDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174
Query: 67 -----SSNWTEFAGTYGYVAPELAYTMKITE-KCDVYSFGVLALEVIKGKHPRDFLXXXX 120
+ F GT ++APE+ ++ + K D++SFG+ A+E+ G P
Sbjct: 175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK 234
Query: 121 XXXLNTDIELDEMLDPRLPAPSRSVQEKLI------SIVKVAFSCLNESPESRPT 169
L DP P+ VQ+K + S K+ CL + PE RPT
Sbjct: 235 VLMLTLQN------DP--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 113 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 167
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T+ GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 168 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD 66
LD S ++ V + L YLH + +HRD+ + N+LL + +ADFG++ FL
Sbjct: 113 LDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 169
Query: 67 -----SSNWTEFAGTYGYVAPELAYTMKITE-KCDVYSFGVLALEVIKGKHPRDFLXXXX 120
+ F GT ++APE+ ++ + K D++SFG+ A+E+ G P
Sbjct: 170 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK 229
Query: 121 XXXLNTDIELDEMLDPRLPAPSRSVQEKLI------SIVKVAFSCLNESPESRPT 169
L DP P+ VQ+K + S K+ CL + PE RPT
Sbjct: 230 VLMLTLQN------DP--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 134 QRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 188
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 189 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 4 AQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYE-----AHVADFG 58
A + WS ++ + +A + Y+ + PPIVHRDL S N+ L E A VADFG
Sbjct: 116 AHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174
Query: 59 IAKFLKPDSSNWTEFAGTYGYVAPEL--AYTMKITEKCDVYSFGVLALEVIKGKHPRDFL 116
++ + + + G + ++APE A TEK D YSF ++ ++ G+ P D
Sbjct: 175 LS---QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
Query: 117 XXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQ 176
+N E E L P +P +L +++++ C + P+ RP + ++
Sbjct: 232 SYGKIKFINMIRE--EGLRPTIP---EDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKE 283
Query: 177 L 177
L
Sbjct: 284 L 284
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNW 70
Q + ++G+A + YL + VHRDL+++N+L++ V+DFG+++FL+ +SS+
Sbjct: 117 QLVGMLRGIASGMRYLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 173
Query: 71 TEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
T + G + APE K T D +S+G++ EV+ G+ P + +
Sbjct: 174 TYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP--YWDMSNQDVI 231
Query: 125 NTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRP 168
N IE D L P P+ S+ ++ C + +RP
Sbjct: 232 NA-IEQDYRLPPPPDCPT--------SLHQLMLDCWQKDRNARP 266
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL ++ D+++ G + +++ G P F I+L+
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 255
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 256 KFFPKARDLVEKLLVL 271
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 18/158 (11%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
++ + L YLH + +HRD+ + N+LL + + +ADFG+A L F G
Sbjct: 122 LREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVG 178
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEM-- 133
T ++APE+ K D++S G+ A+E+ KG+ P N+D+ +
Sbjct: 179 TPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP------------NSDLHPMRVLF 226
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
L P+ P+ Q + +CLN+ P RPT K
Sbjct: 227 LIPKNSPPTLEGQHSK-PFKEFVEACLNKDPRFRPTAK 263
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 125 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 179
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 180 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 111 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 165
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 113 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 167
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 168 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 108 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 162
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 163 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 113 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 167
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 168 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L +LH IV+RDL N+LLD + +ADFG+ K + EF GT Y+A
Sbjct: 131 GLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIA 187
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ K D +SFGVL E++ G+ P
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+A ++Y+ + VHRDL + N+L+ VADFG+A+ + + + WT G
Sbjct: 120 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKF 174
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELDEM- 133
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD++
Sbjct: 175 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVE 226
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVS 174
R+P P + S+ + C + PE RPT + +
Sbjct: 227 RGYRMPCPPECPE----SLHDLMCQCWRKEPEERPTFEYLQ 263
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 24/169 (14%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD---S 67
Q + K V +A+ YL F +HRDL+++N L++ + V+DFG+++++ D S
Sbjct: 106 QLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 162
Query: 68 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNT 126
S ++F + PE+ K + K D+++FGVL E+ GK P + T
Sbjct: 163 SRGSKFPVRWS--PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF---------T 211
Query: 127 DIELDEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
+ E E + RL P + EK+ +I+ +SC +E + RPT KI+
Sbjct: 212 NSETAEHIAQGLRLYRPHLA-SEKVYTIM---YSCWHEKADERPTFKIL 256
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 107 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 161
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 162 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 108 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 162
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 163 RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 111 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 165
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 16/173 (9%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA 60
D + L ++ VA ++Y+ + +HRDL S N+L+ +ADFG+A
Sbjct: 96 DGEGRALKLPNLVDMAAQVAAGMAYIERMNY---IHRDLRSANILVGNGLICKIADFGLA 152
Query: 61 KFLKPDSSNWTEFAG-TYGYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLXX 118
+ ++ + + A + APE A + T K DV+SFG+L E++ KG+ P +
Sbjct: 153 RLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN- 211
Query: 119 XXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
N ++ R+P P Q+ IS+ ++ C + PE RPT +
Sbjct: 212 ------NREVLEQVERGYRMPCP----QDCPISLHELMIHCWKKDPEERPTFE 254
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 112 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 166
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 167 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + SS
Sbjct: 109 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSR 163
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T +GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 164 RTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 105 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 159
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 160 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNW 70
Q + ++G+A + YL + VHR L+++N+L++ V+DFG+++FL+ D+S+
Sbjct: 110 QLVGMLRGIAAGMKYLADMNY---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 166
Query: 71 TEFAGTYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
T + G + APE K T DV+S+G++ EV+ G+ P + +
Sbjct: 167 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMTNQDVI 224
Query: 125 NTDIELDEMLDPRLPAPS 142
N IE D L P + PS
Sbjct: 225 NA-IEQDYRLPPPMDCPS 241
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 30/172 (17%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNW 70
Q + K V +A+ YL F +HRDL+++N L++ + V+DFG+++++ D
Sbjct: 105 QLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---- 157
Query: 71 TEFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXX 123
E+ + G + PE+ K + K D+++FGVL E+ GK P +
Sbjct: 158 -EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF------- 209
Query: 124 LNTDIELDEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
T+ E E + RL P + EK+ +I+ +SC +E + RPT KI+
Sbjct: 210 --TNSETAEHIAQGLRLYRPHLA-SEKVYTIM---YSCWHEKADERPTFKIL 255
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 30/172 (17%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNW 70
Q + K V +A+ YL F +HRDL+++N L++ + V+DFG+++++ D
Sbjct: 106 QLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---- 158
Query: 71 TEFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXX 123
E+ + G + PE+ K + K D+++FGVL E+ GK P +
Sbjct: 159 -EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF------- 210
Query: 124 LNTDIELDEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
T+ E E + RL P + EK+ +I+ +SC +E + RPT KI+
Sbjct: 211 --TNSETAEHIAQGLRLYRPHLA-SEKVYTIM---YSCWHEKADERPTFKIL 256
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 233
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 234 KFFPKARDLVEKLLVL 249
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 30/172 (17%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNW 70
Q + K V +A+ YL F +HRDL+++N L++ + V+DFG+++++ D
Sbjct: 112 QLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---- 164
Query: 71 TEFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXX 123
E+ + G + PE+ K + K D+++FGVL E+ GK P +
Sbjct: 165 -EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF------- 216
Query: 124 LNTDIELDEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
T+ E E + RL P + EK+ +I+ +SC +E + RPT KI+
Sbjct: 217 --TNSETAEHIAQGLRLYRPHLA-SEKVYTIM---YSCWHEKADERPTFKIL 262
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 256
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 257 KFFPKARDLVEKLLVL 272
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 232
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 233 KFFPKARDLVEKLLVL 248
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA---HVADFGIAKFLKPDSSNWTEFAG 75
++ AL YLH + I+HRDL +N++L + + D G AK L TEF G
Sbjct: 131 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVG 186
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T Y+APEL K T D +SFG LA E I G P
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 231
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 232 KFFPKARDLVEKLLVL 247
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA---HVADFGIAKFLKPDSSNWTEFAG 75
++ AL YLH + I+HRDL +N++L + + D G AK L TEF G
Sbjct: 130 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVG 185
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T Y+APEL K T D +SFG LA E I G P
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 30/172 (17%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNW 70
Q + K V +A+ YL F +HRDL+++N L++ + V+DFG+++++ D
Sbjct: 121 QLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---- 173
Query: 71 TEFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXX 123
E+ + G + PE+ K + K D+++FGVL E+ GK P +
Sbjct: 174 -EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF------- 225
Query: 124 LNTDIELDEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
T+ E E + RL P + EK+ +I+ +SC +E + RPT KI+
Sbjct: 226 --TNSETAEHIAQGLRLYRPHLA-SEKVYTIM---YSCWHEKADERPTFKIL 271
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 116 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 230
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 231 KFFPKARDLVEKLLVL 246
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 4 AQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYE-----AHVADFG 58
A + WS ++ + +A + Y+ + PPIVHRDL S N+ L E A VADFG
Sbjct: 116 AHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174
Query: 59 IAKFLKPDSSNWTEFAGTYGYVAPEL--AYTMKITEKCDVYSFGVLALEVIKGKHPRDFL 116
+ + + + G + ++APE A TEK D YSF ++ ++ G+ P D
Sbjct: 175 TS---QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
Query: 117 XXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQ 176
+N E E L P +P +L +++++ C + P+ RP + ++
Sbjct: 232 SYGKIKFINMIRE--EGLRPTIP---EDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKE 283
Query: 177 L 177
L
Sbjct: 284 L 284
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 30/172 (17%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNW 70
Q + K V +A+ YL F +HRDL+++N L++ + V+DFG+++++ D
Sbjct: 101 QLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---- 153
Query: 71 TEFAGTYG------YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXX 123
E+ + G + PE+ K + K D+++FGVL E+ GK P +
Sbjct: 154 -EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF------- 205
Query: 124 LNTDIELDEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
T+ E E + RL P + EK+ +I+ +SC +E + RPT KI+
Sbjct: 206 --TNSETAEHIAQGLRLYRPHLA-SEKVYTIM---YSCWHEKADERPTFKIL 251
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 255
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 256 KFFPKARDLVEKLLVL 271
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 253
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 254 KFFPKARDLVEKLLVL 269
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 255
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 256 KFFPKARDLVEKLLVL 271
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 253
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 254 KFFPKARDLVEKLLVL 269
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 253
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 254 KFFPKARDLVEKLLVL 269
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 146 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 260
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 261 KFFPKARDLVEKLLVL 276
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
AL YL + I+HRD+ N+LLD H+ DF IA L P + T AGT Y+A
Sbjct: 127 ALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMAGTKPYMA 182
Query: 82 PELAYTMK---ITEKCDVYSFGVLALEVIKGKHP 112
PE+ + K + D +S GV A E+++G+ P
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 256
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 257 KFFPKARDLVEKLLVL 272
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 255
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 256 KFFPKARDLVEKLLVL 271
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 253
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 254 KFFPKARDLVEKLLVL 269
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 252
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 253 KFFPKARDLVEKLLVL 268
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 113 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 167
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT Y+ PE EK D++S GVL E + GK P
Sbjct: 168 RTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 237
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 238 KFFPKARDLVEKLLVL 253
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 26/168 (15%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V+ + YL F VHRDL+++N+LL ++ A ++DFG++K L+ D + + A T+G
Sbjct: 120 VSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK--AQTHG 174
Query: 79 -----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDE 132
+ APE K + K DV+SFGVL E G+ P + E+
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---------EVTA 225
Query: 133 MLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
ML+ R+ P+ +E + + C E+RP V +LR
Sbjct: 226 MLEKGERMGCPAGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLR 269
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
YV+PEL + D+++ G + +++ G P
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
YV+PEL + D+++ G + +++ G P F I+L+
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP--FRAGNEYLIFQKIIKLEYDFPE 252
Query: 137 RLPAPSRSVQEKLISI 152
+ +R + EKL+ +
Sbjct: 253 KFFPKARDLVEKLLVL 268
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS--SNWTEFAGT 76
+ AL YLH I+HRDL +N+LL+ + + DFG AK L P+S + F GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
YV+PEL + D+++ G + +++ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 14 NTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEF 73
+T+KG L YLH F +HRD+ + N+LL+ E A +ADFG+A L +
Sbjct: 133 STLKG----LEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXV 185
Query: 74 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT ++APE+ + D++S G+ A+E+ +GK P
Sbjct: 186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 134 QRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 188
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
+ GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 189 RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 26/168 (15%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V+ + YL F VHRDL+++N+LL ++ A ++DFG++K L+ D + + A T+G
Sbjct: 114 VSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHG 168
Query: 79 -----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDE 132
+ APE K + K DV+SFGVL E G+ P + E+
Sbjct: 169 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---------EVTA 219
Query: 133 MLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
ML+ R+ P+ +E + + C E+RP V +LR
Sbjct: 220 MLEKGERMGCPAGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLR 263
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 26/168 (15%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V+ + YL F VHRDL+++N+LL ++ A ++DFG++K L+ D + + A T+G
Sbjct: 120 VSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHG 174
Query: 79 -----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDE 132
+ APE K + K DV+SFGVL E G+ P + E+
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---------EVTA 225
Query: 133 MLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
ML+ R+ P+ +E + + C E+RP V +LR
Sbjct: 226 MLEKGERMGCPAGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLR 269
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +A+FG + + SS
Sbjct: 110 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSR 164
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 165 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 24/169 (14%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD---S 67
Q + K V +A+ YL F +HRDL+++N L++ + V+DFG+++++ D S
Sbjct: 121 QLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETS 177
Query: 68 SNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNT 126
S ++F + PE+ K + K D+++FGVL E+ GK P + T
Sbjct: 178 SVGSKFPVRWS--PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF---------T 226
Query: 127 DIELDEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
+ E E + RL P + EK+ +I+ +SC +E + RPT KI+
Sbjct: 227 NSETAEHIAQGLRLYRPHLA-SEKVYTIM---YSCWHEKADERPTFKIL 271
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 26/168 (15%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V+ + YL F VHRDL+++N+LL ++ A ++DFG++K L+ D + + A T+G
Sbjct: 116 VSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHG 170
Query: 79 -----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDE 132
+ APE K + K DV+SFGVL E G+ P + E+
Sbjct: 171 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---------EVTA 221
Query: 133 MLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
ML+ R+ P+ +E + + C E+RP V +LR
Sbjct: 222 MLEKGERMGCPAGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLR 265
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 26/168 (15%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V+ + YL F VHRDL+++N+LL ++ A ++DFG++K L+ D + + A T+G
Sbjct: 126 VSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHG 180
Query: 79 -----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDE 132
+ APE K + K DV+SFGVL E G+ P + E+
Sbjct: 181 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---------EVTA 231
Query: 133 MLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
ML+ R+ P+ +E + + C E+RP V +LR
Sbjct: 232 MLEKGERMGCPAGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLR 275
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
+ V+ + YL F VHRDL+++N+LL ++ A ++DFG++K L+ D + + A
Sbjct: 133 VHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQ 187
Query: 76 TYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
T+G + APE K + K DV+SFGVL E G+ P + E
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---------E 238
Query: 130 LDEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
+ ML+ R+ P+ +E + + C E+RP V +LR
Sbjct: 239 VTAMLEKGERMGCPAGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLR 285
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
+ V+ + YL F VHRDL+++N+LL ++ A ++DFG++K L+ D + + A
Sbjct: 133 VHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQ 187
Query: 76 TYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
T+G + APE K + K DV+SFGVL E G+ P + E
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---------E 238
Query: 130 LDEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
+ ML+ R+ P+ +E + + C E+RP V +LR
Sbjct: 239 VTAMLEKGERMGCPAGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLR 285
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
+ V+ + YL F VHRDL+++N+LL ++ A ++DFG++K L+ D + + A
Sbjct: 131 VHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQ 185
Query: 76 TYG-----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
T+G + APE K + K DV+SFGVL E G+ P + E
Sbjct: 186 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---------E 236
Query: 130 LDEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
+ ML+ R+ P+ +E + + C E+RP V +LR
Sbjct: 237 VTAMLEKGERMGCPAGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLR 283
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +A+FG + + SS
Sbjct: 111 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSR 165
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 110 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 164
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 165 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 111 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 165
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
+ GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 166 RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD---SSNWTEFAG 75
V + ++YL ++HRDL+++N L+ V+DFG+ +F+ D SS T+F
Sbjct: 112 VCEGMAYLEE---ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP- 167
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLXXXXXXXLNTDIELDEML 134
+ +PE+ + + K DV+SFGVL EV +GK P + N+++ D
Sbjct: 168 -VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE-------NRSNSEVVEDIST 219
Query: 135 DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
RL P + + ++ C E PE RP + +QL
Sbjct: 220 GFRLYKPRLASTH----VYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 108 QRTATYITELANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 162
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 163 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 111 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 165
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 166 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 26/168 (15%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V+ + YL F VHRDL+++N+LL ++ A ++DFG++K L+ D + + A T+G
Sbjct: 478 VSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHG 532
Query: 79 -----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDE 132
+ APE K + K DV+SFGVL E G+ P + E+
Sbjct: 533 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---------EVTA 583
Query: 133 MLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
ML+ R+ P+ +E + + C E+RP V +LR
Sbjct: 584 MLEKGERMGCPAGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLR 627
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 26/168 (15%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V+ + YL F VHRDL+++N+LL ++ A ++DFG++K L+ D + + A T+G
Sbjct: 479 VSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHG 533
Query: 79 -----YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDE 132
+ APE K + K DV+SFGVL E G+ P + E+
Sbjct: 534 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---------EVTA 584
Query: 133 MLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
ML+ R+ P+ +E + + C E+RP V +LR
Sbjct: 585 MLEKGERMGCPAGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLR 628
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 108 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 162
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 163 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V AL YLH I++RDL +N+LLD + DFG AK++ PD + GT
Sbjct: 115 VCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVT--YXLCGTPD 168
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ T + D +SFG+L E++ G P
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 111 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 165
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 166 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 113 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 167
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 168 RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L +LH IV+RDL N+LLD + +ADFG+ K + F GT Y+A
Sbjct: 130 GLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIA 186
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ K D +SFGVL E++ G+ P
Sbjct: 187 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 108 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 162
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 163 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 4 AQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYE-----AHVADFG 58
A + WS ++ + +A + Y+ + PPIVHRDL S N+ L E A VADF
Sbjct: 116 AHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFS 174
Query: 59 IAKFLKPDSSNWTEFAGTYGYVAPEL--AYTMKITEKCDVYSFGVLALEVIKGKHPRDFL 116
++ + + + G + ++APE A TEK D YSF ++ ++ G+ P D
Sbjct: 175 LS---QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
Query: 117 XXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQ 176
+N E E L P +P +L +++++ C + P+ RP + ++
Sbjct: 232 SYGKIKFINMIRE--EGLRPTIP---EDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKE 283
Query: 177 L 177
L
Sbjct: 284 L 284
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 109 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 163
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+ PE+ EK D++S GVL E + GK P
Sbjct: 164 RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 112 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSR 166
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT Y+ PE+ EK D++S GVL E + G P
Sbjct: 167 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
++ L +LH I++RDL N++LD E +ADFG+ K D EF GT
Sbjct: 129 ISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPD 185
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRD 114
Y+APE+ + D +++GVL E++ G+ P D
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 5 QELDWSQRMNTIKGVADALSYLHH--DCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKF 62
Q LD + + + AL H D ++HRDL N+ LD + + DFG+A+
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 63 LKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEV 106
L D+S F GT Y++PE M EK D++S G L E+
Sbjct: 166 LNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA- 74
I+ +ADA L+ I+HRD+ N+++ V DFGIA+ + ++ T+ A
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 75 --GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y++PE A + + DVYS G + EV+ G+ P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA- 74
I+ +ADA L+ I+HRD+ N+++ V DFGIA+ + ++ T+ A
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 75 --GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y++PE A + + DVYS G + EV+ G+ P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA- 74
I+ +ADA L+ I+HRD+ N+++ V DFGIA+ + ++ T+ A
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 75 --GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y++PE A + + DVYS G + EV+ G+ P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 5 QELDWSQRMNTIKGVADALSYLHH--DCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKF 62
Q LD + + + AL H D ++HRDL N+ LD + + DFG+A+
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
Query: 63 LKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEV 106
L D+S F GT Y++PE M EK D++S G L E+
Sbjct: 166 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA- 74
I+ +ADA L+ I+HRD+ N+++ V DFGIA+ + ++ T+ A
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 75 --GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y++PE A + + DVYS G + EV+ G+ P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+A + YL + + VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 148 QLVGMLRGIAAGMKYLANMNY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 204
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + APE K T DV+SFG++ EV+ G+ P
Sbjct: 205 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 22/161 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+A ++Y+ + VHRDL++ N+L+ VADFG+A+ + + + +T G
Sbjct: 123 IASGMAYVERMNY---VHRDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKF 177
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELDEM- 133
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD++
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVE 229
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVS 174
R+P P + S+ + C + PE RPT + +
Sbjct: 230 RGYRMPCPPECPE----SLHDLMCQCWRKDPEERPTFEYLQ 266
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
++HRDL N+ LD + + DFG+A+ L D EF GT Y++PE M EK
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEK 196
Query: 94 CDVYSFGVLALEV 106
D++S G L E+
Sbjct: 197 SDIWSLGCLLYEL 209
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA- 74
I+ +ADA L+ I+HRD+ N+++ V DFGIA+ + ++ T+ A
Sbjct: 136 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA 195
Query: 75 --GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y++PE A + + DVYS G + EV+ G+ P
Sbjct: 196 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD 66
L+ Q + V AL+YLH ++HRD+ S ++LL L+ ++DFG + D
Sbjct: 138 LNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD 194
Query: 67 SSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT ++APE+ + D++S G++ +E++ G+ P
Sbjct: 195 VPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+A ++Y+ + VHRDL + N+L+ VADFG+A+ + + + +T G
Sbjct: 120 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKF 174
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELDEM- 133
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD++
Sbjct: 175 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVE 226
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVS 174
R+P P + S+ + C + PE RPT + +
Sbjct: 227 RGYRMPCPPECPE----SLHDLMCQCWRKEPEERPTFEYLQ 263
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 18/156 (11%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A ++Y+ + VHRDL + N+L+ VADFG+A+ ++ + + A
Sbjct: 113 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI 169
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELDEM-LD 135
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD++
Sbjct: 170 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVERG 221
Query: 136 PRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
R+P P + S+ + C + PE RPT +
Sbjct: 222 YRMPCPPECPE----SLHDLMCQCWRKEPEERPTFE 253
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+A ++Y+ + VHRDL + N+L+ VADFG+A+ + + + +T G
Sbjct: 116 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKF 170
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELDEM- 133
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD++
Sbjct: 171 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVE 222
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVS 174
R+P P + S+ + C + PE RPT + +
Sbjct: 223 RGYRMPCPPECPE----SLHDLMCQCWRKEPEERPTFEYLQ 259
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A ++Y+ + VHRDL + N+L+ VADFG+A+ ++ + + A
Sbjct: 123 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI 179
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELDEM-LD 135
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD++
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVERG 231
Query: 136 PRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVS 174
R+P P + S+ + C + PE RPT + +
Sbjct: 232 YRMPCPPECPE----SLHDLMCQCWRKDPEERPTFEYLQ 266
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+A ++Y+ + VHRDL + N+L+ VADFG+A+ + + + +T G
Sbjct: 123 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKF 177
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELDEM- 133
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD++
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVE 229
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVS 174
R+P P + S+ + C + PE RPT + +
Sbjct: 230 RGYRMPCPPECPE----SLHDLMCQCWRKDPEERPTFEYLQ 266
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+A ++Y+ + VHRDL + N+L+ VADFG+A+ + + + +T G
Sbjct: 123 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKF 177
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELDEM- 133
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD++
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVE 229
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVS 174
R+P P + S+ + C + PE RPT + +
Sbjct: 230 RGYRMPCPPECPE----SLHDLMCQCWRKDPEERPTFEYLQ 266
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 120 IAEGMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 176
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L +E++ G+ P + N ++
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-------NPEVIRALERGY 229
Query: 137 RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
R+P P +E + + C PE RPT + + L
Sbjct: 230 RMPRPENCPEE----LYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+A ++Y+ + VHRDL + N+L+ VADFG+A+ + + + +T G
Sbjct: 123 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKF 177
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELDEM- 133
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD++
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVE 229
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVS 174
R+P P + S+ + C + PE RPT + +
Sbjct: 230 RGYRMPCPPECPE----SLHDLMCQCWRKDPEERPTFEYLQ 266
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+A AL +LH I++RDL +N+LLD E + DFG++K F GT
Sbjct: 135 LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 191
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ T+ D +SFGVL E++ G P
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+A ++Y+ + VHRDL + N+L+ VADFG+A+ + + + +T G
Sbjct: 123 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKF 177
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELDEM- 133
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD++
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVE 229
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVS 174
R+P P + S+ + C + PE RPT + +
Sbjct: 230 RGYRMPCPPECPE----SLHDLMCQCWRKDPEERPTFEYLQ 266
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+A ++Y+ + VHRDL + N+L+ VADFG+A+ + + + +T G
Sbjct: 123 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKF 177
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELDEM- 133
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD++
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVE 229
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVS 174
R+P P + S+ + C + PE RPT + +
Sbjct: 230 RGYRMPCPPECPE----SLHDLMCQCWRKDPEERPTFEYLQ 266
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+A ++Y+ + VHRDL + N+L+ VADFG+A+ + + + +T G
Sbjct: 123 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKF 177
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELDEM- 133
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD++
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVE 229
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVS 174
R+P P + S+ + C + PE RPT + +
Sbjct: 230 RGYRMPCPPECPE----SLHDLMCQCWRKDPEERPTFEYLQ 266
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+A AL +LH I++RDL +N+LLD E + DFG++K F GT
Sbjct: 136 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 192
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ T+ D +SFGVL E++ G P
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+A AL +LH I++RDL +N+LLD E + DFG++K F GT
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 191
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ T+ D +SFGVL E++ G P
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 28/163 (17%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+A ++Y+ + VHRDL + N+L+ VADFG+A+ ++ + E+ G
Sbjct: 289 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQG 340
Query: 79 ------YVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELD 131
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD
Sbjct: 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LD 392
Query: 132 EM-LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
++ R+P P + S+ + C + PE RPT + +
Sbjct: 393 QVERGYRMPCPPECPE----SLHDLMCQCWRKEPEERPTFEYL 431
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 28/163 (17%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+A ++Y+ + VHRDL + N+L+ VADFG+A+ ++ + E+ G
Sbjct: 289 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQG 340
Query: 79 ------YVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELD 131
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD
Sbjct: 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LD 392
Query: 132 EM-LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
++ R+P P + S+ + C + PE RPT + +
Sbjct: 393 QVERGYRMPCPPECPE----SLHDLMCQCWRKEPEERPTFEYL 431
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+A ++Y+ + VHRDL + N+L+ VADFG+A+ + + + +T G
Sbjct: 114 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKF 168
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELDEM- 133
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD++
Sbjct: 169 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVE 220
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVS 174
R+P P + S+ + C + PE RPT + +
Sbjct: 221 RGYRMPCPPECPE----SLHDLMCQCWRKDPEERPTFEYLQ 257
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+A ++Y+ + VHRDL + N+L+ VADFG+A+ + + + +T G
Sbjct: 112 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKF 166
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELDEM- 133
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD++
Sbjct: 167 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LDQVE 218
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVS 174
R+P P + S+ + C + PE RPT + +
Sbjct: 219 RGYRMPCPPECPE----SLHDLMCQCWRKDPEERPTFEYLQ 255
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 28/163 (17%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+A ++Y+ + VHRDL + N+L+ VADFG+A+ ++ + E+ G
Sbjct: 289 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQG 340
Query: 79 ------YVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELD 131
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD
Sbjct: 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LD 392
Query: 132 EM-LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
++ R+P P + S+ + C + PE RPT + +
Sbjct: 393 QVERGYRMPCPPECPE----SLHDLMCQCWRKEPEERPTFEYL 431
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA- 74
I+ +ADA L+ I+HRD+ N+L+ V DFGIA+ + ++ + A
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAA 178
Query: 75 --GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y++PE A + + DVYS G + EV+ G+ P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 293 IAEGMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 349
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L +E++ G+ P + N ++
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-------NPEVIRALERGY 402
Query: 137 RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
R+P P +E + + C PE RPT + + L
Sbjct: 403 RMPRPENCPEE----LYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 28/163 (17%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+A ++Y+ + VHRDL + N+L+ VADFG+A+ ++ + E+ G
Sbjct: 372 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQG 423
Query: 79 ------YVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELD 131
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD
Sbjct: 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LD 475
Query: 132 EM-LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
++ R+P P + S+ + C + PE RPT + +
Sbjct: 476 QVERGYRMPCPPECPE----SLHDLMCQCWRKEPEERPTFEYL 514
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T I +A+ALSY H ++HRD+ +NLLL E +ADFG + + SS
Sbjct: 112 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSR 166
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+ PE+ EK D++S GVL E + G P
Sbjct: 167 RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 25/182 (13%)
Query: 3 AAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAK 61
AA + W + +GVA YLH ++HRDL NLLL + DFG A
Sbjct: 102 AAHAMSWC--LQCSQGVA----YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC 155
Query: 62 FLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXX 121
++ ++ T G+ ++APE+ +EKCDV+S+G++ EVI + P D +
Sbjct: 156 DIQ---THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF 212
Query: 122 XXL-NTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM----KIVSQQ 176
+ L LP P S+ + C ++ P RP+M KI++
Sbjct: 213 RIMWAVHNGTRPPLIKNLPKPIESLMTR----------CWSKDPSQRPSMEEIVKIMTHL 262
Query: 177 LR 178
+R
Sbjct: 263 MR 264
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+A + YL F VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSDMGF---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 25/182 (13%)
Query: 3 AAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAK 61
AA + W + +GVA YLH ++HRDL NLLL + DFG A
Sbjct: 101 AAHAMSWC--LQCSQGVA----YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC 154
Query: 62 FLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXX 121
++ ++ T G+ ++APE+ +EKCDV+S+G++ EVI + P D +
Sbjct: 155 DIQ---THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF 211
Query: 122 XXL-NTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM----KIVSQQ 176
+ L LP P S+ + C ++ P RP+M KI++
Sbjct: 212 RIMWAVHNGTRPPLIKNLPKPIESLMTR----------CWSKDPSQRPSMEEIVKIMTHL 261
Query: 177 LR 178
+R
Sbjct: 262 MR 263
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 14 NTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEF 73
TI+GV YLH++ ++HRDL NL L+ + + + DFG+A ++ D +
Sbjct: 134 QTIQGV----QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL 186
Query: 74 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ + + D++S G + ++ GK P
Sbjct: 187 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+A + YL + VHRDL+++N+L++ V+DFG+A+ L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA 204
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 14 NTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEF 73
TI+GV YLH++ ++HRDL NL L+ + + + DFG+A ++ D +
Sbjct: 150 QTIQGV----QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL 202
Query: 74 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ + + D++S G + ++ GK P
Sbjct: 203 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK-------FLKPDSS- 68
+ + +ALSY+H I+HRDL N+ +D + DFG+AK LK DS
Sbjct: 123 RQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 69 ------NWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLALEVI 107
N T GT YVA E L T EK D+YS G++ E+I
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK-------FLKPDSS- 68
+ + +ALSY+H I+HRDL N+ +D + DFG+AK LK DS
Sbjct: 123 RQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 69 ------NWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLALEVI 107
N T GT YVA E L T EK D+YS G++ E+I
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 10/103 (9%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
++ + +A+S+LH + IVHRDL +N+LLD + ++DFG + L+P E G
Sbjct: 206 MRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP-GEKLRELCG 261
Query: 76 TYGYVAPE-LAYTMKIT-----EKCDVYSFGVLALEVIKGKHP 112
T GY+APE L +M T ++ D+++ GV+ ++ G P
Sbjct: 262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ WT
Sbjct: 287 IAEGMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT------- 336
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDPR 137
APE T K DV+SFG+L +E++ G+ P + N ++ R
Sbjct: 337 --APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-------NPEVIRALERGYR 387
Query: 138 LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
+P P +E + + C PE RPT + + L
Sbjct: 388 MPRPENCPEE----LYNIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 28/163 (17%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+A ++Y+ + VHRDL + N+L+ VADFG+ + ++ + E+ G
Sbjct: 290 IASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLGRLIEDN-----EYTARQG 341
Query: 79 ------YVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELD 131
+ APE A + T K DV+SFG+L E+ KG+ P + +N ++ LD
Sbjct: 342 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-------VNREV-LD 393
Query: 132 EM-LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
++ R+P P + S+ + C + PE RPT + +
Sbjct: 394 QVERGYRMPCPPECPE----SLHDLMCQCWRKDPEERPTFEYL 432
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
++ + YLH + ++HRDL NL L+ + E + DFG+A ++ D G
Sbjct: 127 LRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG 183
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T Y+APE+ + + DV+S G + ++ GK P
Sbjct: 184 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
++ + YLH + ++HRDL NL L+ + E + DFG+A ++ D G
Sbjct: 123 LRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG 179
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T Y+APE+ + + DV+S G + ++ GK P
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+ + YL + VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 117 QLVGMLRGIGSGMKYLSDMSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA 173
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + APE K T DV+S+G++ EV+ G+ P
Sbjct: 174 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
++ + YLH + ++HRDL NL L+ + E + DFG+A ++ D G
Sbjct: 123 LRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG 179
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T Y+APE+ + + DV+S G + ++ GK P
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+A + YL + VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 119 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+A + YL + VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 136 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 192
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 193 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+ + YL + VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 111 QLVGMLRGIGSGMKYLSDMSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA 167
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + APE K T DV+S+G++ EV+ G+ P
Sbjct: 168 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+A + YL + VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 119 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLL---LDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
V DA+ YLH IVHRDL +NLL LD + + ++DFG++K P S T G
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CG 180
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GYVAPE+ ++ D +S GV+A ++ G P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I++RDL N++LD E +ADFG+ K D F GT Y+APE+ +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++FGVL E++ G+ P
Sbjct: 523 VDWWAFGVLLYEMLAGQAP 541
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N + D + + H IVHRD+ +N+L+D + DFGIAK L S T
Sbjct: 114 INFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTN 170
Query: 73 FA-GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y +PE A E D+YS G++ E++ G+ P
Sbjct: 171 HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLL---LDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
V DA+ YLH IVHRDL +NLL LD + + ++DFG++K P S T G
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CG 180
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GYVAPE+ ++ D +S GV+A ++ G P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLL---LDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
V DA+ YLH IVHRDL +NLL LD + + ++DFG++K P S T G
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CG 180
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GYVAPE+ ++ D +S GV+A ++ G P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 14 NTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEF 73
TI+GV YLH++ ++HRDL NL L+ + + + DFG+A ++ D
Sbjct: 150 QTIQGV----QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL 202
Query: 74 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ + + D++S G + ++ GK P
Sbjct: 203 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 14 NTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEF 73
TI+GV YLH++ ++HRDL NL L+ + + + DFG+A ++ D
Sbjct: 150 QTIQGV----QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL 202
Query: 74 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ + + D++S G + ++ GK P
Sbjct: 203 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G++ + YL + VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 125 QLVGMLRGISAGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 181
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNT 126
+T G + APE K T DV+S+G++ EV+ G+ P N
Sbjct: 182 YTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP-------YWEMTNQ 234
Query: 127 DIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRP 168
D+ RLP+P + ++ ++ C + SRP
Sbjct: 235 DVIKAVEEGYRLPSP----MDCPAALYQLMLDCWQKERNSRP 272
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLL---LDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
V DA+ YLH IVHRDL +NLL LD + + ++DFG++K P S T G
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CG 180
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GYVAPE+ ++ D +S GV+A ++ G P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I++RDL N++LD E +ADFG+ K D F GT Y+APE+ +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++FGVL E++ G+ P
Sbjct: 202 VDWWAFGVLLYEMLAGQAP 220
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+A + YL + VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+A + YL + VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+A + YL + VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
++ + YLH + ++HRDL NL L+ + E + DFG+A ++ D G
Sbjct: 147 LRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG 203
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T Y+APE+ + + DV+S G + ++ GK P
Sbjct: 204 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+A + YL + VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+A + YL + VHRDL+++N+L++ V+DFG+ + L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+A + YL + VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 146 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 202
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 203 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
++ + YLH + ++HRDL NL L+ + E + DFG+A ++ D G
Sbjct: 145 LRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG 201
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T Y+APE+ + + DV+S G + ++ GK P
Sbjct: 202 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+A + YL + VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
++ + YLH + ++HRDL NL L+ + E + DFG+A ++ D G
Sbjct: 121 LRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG 177
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T Y+APE+ + + DV+S G + ++ GK P
Sbjct: 178 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 23/179 (12%)
Query: 1 DAAAQELDWS----QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVAD 56
DA ELD Q + + +AL++LH I+HRDL + N+L+ LE + +AD
Sbjct: 96 DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLAD 152
Query: 57 FGI-AKFLKPDSSNWTEFAGTYGYVAPELAY--TMKITE---KCDVYSFGVLALEVIKGK 110
FG+ AK LK F GT ++APE+ TMK T K D++S G+ +E+ + +
Sbjct: 153 FGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 211
Query: 111 HPRDFLXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
P L + +++ + P L PS+ E +K+A L+++PE+RP+
Sbjct: 212 PPHHEL-----NPMRVLLKIAKSDPPTLLTPSKWSVE-FRDFLKIA---LDKNPETRPS 261
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 23/179 (12%)
Query: 1 DAAAQELDWS----QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVAD 56
DA ELD Q + + +AL++LH I+HRDL + N+L+ LE + +AD
Sbjct: 104 DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLAD 160
Query: 57 FGI-AKFLKPDSSNWTEFAGTYGYVAPELAY--TMKITE---KCDVYSFGVLALEVIKGK 110
FG+ AK LK F GT ++APE+ TMK T K D++S G+ +E+ + +
Sbjct: 161 FGVSAKNLKTLQKR-DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219
Query: 111 HPRDFLXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
P L + +++ + P L PS+ E +K+A L+++PE+RP+
Sbjct: 220 PPHHEL-----NPMRVLLKIAKSDPPTLLTPSKWSVE-FRDFLKIA---LDKNPETRPS 269
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 124 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 178
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 179 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 231
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 232 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 268
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL YLH + +V+RDL +NL+LD + + DFG+ K D + F GT
Sbjct: 257 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE 314
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ D + GV+ E++ G+ P
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL YLH + +V+RDL +NL+LD + + DFG+ K D + F GT
Sbjct: 260 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE 317
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ D + GV+ E++ G+ P
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 120 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 174
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 175 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 227
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 228 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ L +LH I++RDL +N+LLD + ++D G+A LK + +AGT G
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APEL + D ++ GV E+I + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 133 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 187
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 188 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 240
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 241 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 277
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ L +LH I++RDL +N+LLD + ++D G+A LK + +AGT G
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APEL + D ++ GV E+I + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ L +LH I++RDL +N+LLD + ++D G+A LK + +AGT G
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APEL + D ++ GV E+I + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ L +LH I++RDL +N+LLD + ++D G+A LK + +AGT G
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APEL + D ++ GV E+I + P
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 125 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 179
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 180 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 232
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 233 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 269
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 122 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 176
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 177 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 229
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 230 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 266
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT-EFAGTY 77
V+ + YL F VHRDL+++N+LL + A ++DFG++K L D S +T AG +
Sbjct: 119 VSMGMKYLEEKNF---VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 175
Query: 78 --GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+ APE K + + DV+S+GV E + G+ P
Sbjct: 176 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 120 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 174
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 175 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 227
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 228 -DYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V ALSYLH+ ++HRD+ S ++LL + ++DFG + + GT
Sbjct: 150 VLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPY 206
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APE+ + + D++S G++ +E+I G+ P
Sbjct: 207 WMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 125 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 179
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 180 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 232
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 233 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 125 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 179
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 180 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 232
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 233 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 269
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 120 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 174
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 175 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 227
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 228 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 122 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 176
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 177 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 229
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 230 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 266
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 120 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 174
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 175 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 227
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 228 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 125 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 179
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 180 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 232
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 233 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 120 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 174
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 175 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 227
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 228 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 120 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 174
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 175 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 227
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 228 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++GV + YL + VHRDL+++N+L+D V+DFG+++ L+ D +
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNT 126
+T G + APE + DV+SFGV+ EV+ G+ P N
Sbjct: 209 YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP-------YWNMTNR 261
Query: 127 DIELDEMLDPRLPAP 141
D+ RLPAP
Sbjct: 262 DVISSVEEGYRLPAP 276
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLD-LEYEA--HVADFGIAKFLKPDSSNWTE 72
IK V ++YLH IVHRDL +NLLL+ E +A + DFG++ + + E
Sbjct: 142 IKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKE 197
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ K EKCDV+S GV+ ++ G P
Sbjct: 198 RLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL YLH + +V+RDL +NL+LD + + DFG+ K D + F GT
Sbjct: 117 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 174
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ D + GV+ E++ G+ P
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL YLH + +V+RDL +NL+LD + + DFG+ K D + F GT
Sbjct: 119 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 176
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ D + GV+ E++ G+ P
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL YLH + +V+RDL +NL+LD + + DFG+ K D + F GT
Sbjct: 118 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 175
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ D + GV+ E++ G+ P
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ T AG
Sbjct: 125 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKF 179
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 180 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 232
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 233 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 269
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
+ + A+ Y H IVHRDL ++NLLLD + +ADFG + + EF G
Sbjct: 119 FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDEFCG 174
Query: 76 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 114
+ Y APEL K + DV+S GV+ ++ G P D
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ T AG
Sbjct: 121 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKF 175
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 176 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 228
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 229 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 265
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A + YL +VHRDL+++N+L+ + DFG+A+ L+ D +
Sbjct: 120 LNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 176
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E + K T + DV+S+GV E++ G P D + E
Sbjct: 177 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR---------E 227
Query: 130 LDEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
+ ++L+ RLP P I + V C +SRP K
Sbjct: 228 IPDLLEKGERLPQPPICT----IDVYMVMVKCWMIDADSRPKFK 267
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+ + YL VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 132 QLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA 188
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + APE K T DV+S+G++ EV+ G+ P
Sbjct: 189 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL +LH I++RDL N+LLD E +ADFG+ K + F GT
Sbjct: 133 IISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPD 189
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ M D ++ GVL E++ G P
Sbjct: 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK--PDSS 68
Q + ++GV + YL + VHRDL+++N+L+D V+DFG+++ L+ PD++
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 69 NWTEFAGT-YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNT 126
T + APE + DV+SFGV+ EV+ G+ P N
Sbjct: 209 XTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP-------YWNMTNR 261
Query: 127 DIELDEMLDPRLPAP 141
D+ RLPAP
Sbjct: 262 DVISSVEEGYRLPAP 276
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A + YL +VHRDL+++N+L+ + DFG+A+ L+ D +
Sbjct: 143 LNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 199
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E + K T + DV+S+GV E++ G P D + E
Sbjct: 200 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR---------E 250
Query: 130 LDEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
+ ++L+ RLP P I + V C +SRP K
Sbjct: 251 IPDLLEKGERLPQPPICT----IDVYMVMVKCWMIDADSRPKFK 290
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+A + YL + VHRDL+++N+L++ V+DFG+++ ++ D +
Sbjct: 146 QLVGMLRGIAAGMRYLADMGY---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV 202
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + APE K T DV+S+G++ EV+ G+ P
Sbjct: 203 YTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLL---DLEYEAHVADFGIAKFLKPDSSNWTE 72
I+ V DA+ YLH IVHRDL +NLL D E + ++DFG++K ++ +
Sbjct: 126 IRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMST 181
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT GYVAPE+ ++ D +S GV+A ++ G P
Sbjct: 182 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 18 GVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY 77
V ALS LH ++HRD+ S ++LL + ++DFG + + GT
Sbjct: 255 AVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 311
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APEL + + D++S G++ +E++ G+ P
Sbjct: 312 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 124 IAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 180
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L E++ G+ P + T+ E+ + L+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---------TNPEVIQNLER 231
Query: 137 --RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
R+ P + E+L ++++ C E PE RPT
Sbjct: 232 GYRMVRPD-NCPEELYQLMRL---CWKERPEDRPTF 263
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPD-SSN 69
Q + ++G+A + YL VHRDL+++N+L++ V+DFG+++ L+ D +
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 70 WTEFAGT--YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+T G + +PE K T DV+S+G++ EV+ G+ P
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 126 IAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 182
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L E++ G+ P + T+ E+ + L+
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---------TNPEVIQNLER 233
Query: 137 --RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
R+ P + E+L ++++ C E PE RPT
Sbjct: 234 GYRMVRPD-NCPEELYQLMRL---CWKERPEDRPTF 265
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 127 IAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 183
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L E++ G+ P + T+ E+ + L+
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---------TNPEVIQNLER 234
Query: 137 --RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
R+ P + E+L ++++ C E PE RPT
Sbjct: 235 GYRMVRPD-NCPEELYQLMRL---CWKERPEDRPTF 266
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 121 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKF 175
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 176 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 228
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 229 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 265
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V L+YL I+HRD+ N+L++ E + DFG++ L + +N EF GT
Sbjct: 116 VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRS 171
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPR 113
Y++PE + + D++S G+ +E+ G++PR
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPR 206
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK-------FLKPDSS- 68
+ + +ALSY+H I+HR+L N+ +D + DFG+AK LK DS
Sbjct: 123 RQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 69 ------NWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLALEVI 107
N T GT YVA E L T EK D YS G++ E I
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 118 IAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 174
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L E++ G+ P + T+ E+ + L+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---------TNPEVIQNLER 225
Query: 137 --RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
R+ P + E+L ++++ C E PE RPT
Sbjct: 226 GYRMVRPD-NCPEELYQLMRL---CWKERPEDRPTF 257
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 119 IAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 175
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L E++ G+ P + T+ E+ + L+
Sbjct: 176 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---------TNPEVIQNLER 226
Query: 137 --RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
R+ P + E+L ++++ C E PE RPT
Sbjct: 227 GYRMVRPD-NCPEELYQLMRL---CWKERPEDRPTF 258
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 120 IAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 176
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L E++ G+ P + T+ E+ + L+
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---------TNPEVIQNLER 227
Query: 137 --RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
R+ P + E+L ++++ C E PE RPT
Sbjct: 228 GYRMVRPD-NCPEELYQLMRL---CWKERPEDRPTF 259
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 122 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKF 176
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 177 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 229
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 230 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 266
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLE---YEAHVADFGIAKFLKPDSSNWTE 72
++ + A+S++H +VHRDL +NLL E E + DFG A+ PD+
Sbjct: 112 MRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT 168
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T Y APEL E CD++S GV+ ++ G+ P
Sbjct: 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 31/164 (18%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAH----VADFGIAKFLKPDSSNWT 71
+K + +AL+Y H +VH+DL +N+L + H + DFG+A+ K D + T
Sbjct: 130 MKQMMNALAYFHSQ---HVVHKDLKPENILFQ-DTSPHSPIKIIDFGLAELFKSDEHS-T 184
Query: 72 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELD 131
AGT Y+APE+ + +T KCD++S GV+ ++ G P T L+
Sbjct: 185 NAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTGCLPF------------TGTSLE 231
Query: 132 EML------DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
E+ +P R + + + ++K L + PE RP+
Sbjct: 232 EVQQKATYKEPNYAVECRPLTPQAVDLLK---QMLTKDPERRPS 272
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I++RDL +N+LLD E + DFG++K F GT Y+APE+ +
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHS 210
Query: 94 CDVYSFGVLALEVIKGKHP 112
D +S+GVL E++ G P
Sbjct: 211 ADWWSYGVLMFEMLTGSLP 229
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 118 IAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 174
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L E++ G+ P + T+ E+ + L+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---------TNPEVIQNLER 225
Query: 137 --RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
R+ P + E+L ++++ C E PE RPT
Sbjct: 226 GYRMVRPD-NCPEELYQLMRL---CWKERPEDRPTF 257
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HR+L+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 324 ISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 378
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 379 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 431
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 432 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 468
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA---HVADFGIAKFLKPDSSNWTEFAG 75
+ L ++H IVHRDL +NLLL + + +ADFG+A ++ D W FAG
Sbjct: 109 IQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAG 168
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GY++PE+ + D+++ GV+ ++ G P
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK-PDSSNWTEFAGTY 77
+ + YLH I+HRDL+ NLLL +ADFG+A LK P ++T GT
Sbjct: 121 IITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTP 176
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRD 114
Y++PE+A + DV+S G + ++ G+ P D
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HR+L+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 327 ISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 381
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 382 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 434
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 435 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 471
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
Query: 14 NTIKGVADALSYLH-HDCFPPIVHRDLSSKNLLLDLEYEA---HVADFGIAKFLKPDSSN 69
+ I + ++++++H HD IVHRDL +NLLL + + +ADFG+A ++ +
Sbjct: 134 HCIHQILESVNHIHQHD----IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQA 189
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
W FAGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 190 WFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA---HVADFGIAKFLKPDSSNWTEFAG 75
+ L ++H IVHRDL +NLLL + + +ADFG+A ++ D W FAG
Sbjct: 109 IQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAG 168
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GY++PE+ + D+++ GV+ ++ G P
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V ALS LH ++HRD+ S ++LL + ++DFG + + GT
Sbjct: 179 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY 235
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APEL + + D++S G++ +E++ G+ P
Sbjct: 236 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 18 GVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY 77
V ALS LH ++HRD+ S ++LL + ++DFG + + GT
Sbjct: 133 AVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 189
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APEL + + D++S G++ +E++ G+ P
Sbjct: 190 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK--FLKPDSS--NWTEFA 74
VA + YL F VHRDL+++N +LD ++ VADFG+A+ + K S N T
Sbjct: 141 VAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAK 197
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 18 GVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY 77
V ALS LH ++HRD+ S ++LL + ++DFG + + GT
Sbjct: 135 AVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 191
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APEL + + D++S G++ +E++ G+ P
Sbjct: 192 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 124 IAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 180
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L E++ G+ P + T+ E+ + L+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---------TNPEVIQNLER 231
Query: 137 --RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
R+ P + E+L ++++ C E PE RPT
Sbjct: 232 GYRMVRPD-NCPEELYQLMRL---CWKERPEDRPTF 263
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 14 NTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA---HVADFGIAKFLKPDSSNW 70
+ I+ + +A+ + H +VHRDL +NLLL + + +ADFG+A ++ D W
Sbjct: 107 HCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAW 163
Query: 71 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
FAGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 164 FGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 25/163 (15%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
VA + YL F VHRDL+++N +LD + VADFG+A+ + D ++ +
Sbjct: 133 VARGMEYLAEQKF---VHRDLAARNCMLDESFTVKVADFGLARDIL-DREYYSVQQHRHA 188
Query: 79 -----YVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLXXXXXXXLNTDIELDE 132
+ A E T + T K DV+SFGVL E++ +G P + +L
Sbjct: 189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI---------DPFDLTH 239
Query: 133 ML--DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
L RLP P S+ +V C P RPT +++
Sbjct: 240 FLAQGRRLPQPEYCPD----SLYQVMQQCWEADPAVRPTFRVL 278
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 128 IAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 184
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L E++ G+ P + T+ E+ + L+
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---------TNPEVIQNLER 235
Query: 137 --RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
R+ P + E+L ++++ C E PE RPT
Sbjct: 236 GYRMVRPD-NCPEELYQLMRL---CWKERPEDRPTF 267
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 123 IAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 179
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L E++ G+ P + T+ E+ + L+
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---------TNPEVIQNLER 230
Query: 137 --RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
R+ P + E+L ++++ C E PE RPT
Sbjct: 231 GYRMVRPD-NCPEELYQLMRL---CWKERPEDRPTF 262
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HR+L+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 366 ISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKF 420
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L+ EL E
Sbjct: 421 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK 473
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 474 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 510
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL YLH +V+RD+ +NL+LD + + DFG+ K D + F GT
Sbjct: 119 IVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 175
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ D + GV+ E++ G+ P
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL YLH +V+RD+ +NL+LD + + DFG+ K D + F GT
Sbjct: 114 IVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ D + GV+ E++ G+ P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 5 QELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK 64
+E+ S + V+ + YL F VHR+L+++N+LL + A ++DFG++K L
Sbjct: 431 EEIPVSNVAELLHQVSMGMKYLEEKNF---VHRNLAARNVLLVNRHYAKISDFGLSKALG 487
Query: 65 PDSSNWT-EFAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
D S +T AG + + APE K + + DV+S+GV E + G+ P
Sbjct: 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA---HVADFGIAKFLKPDSSNWTE 72
I+ + ++++Y H + IVHR+L +NLLL + + +ADFG+A + DS W
Sbjct: 134 IQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHG 189
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
FAGT GY++PE+ ++ D+++ GV+ ++ G P
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 18 GVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY 77
V ALS LH ++HRD+ S ++LL + ++DFG + + GT
Sbjct: 124 AVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 180
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APEL + + D++S G++ +E++ G+ P
Sbjct: 181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 118 IAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 174
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L E++ G+ P + T+ E+ + L+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---------TNPEVIQNLER 225
Query: 137 --RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
R+ P + E+L ++++ C E PE RPT
Sbjct: 226 GYRMVRPD-NCPEELYQLMRL---CWKERPEDRPTF 257
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ T AG
Sbjct: 118 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKF 172
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L L++
Sbjct: 173 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL-----LEK- 225
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 226 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 262
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL YLH +V+RD+ +NL+LD + + DFG+ K D + F GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ D + GV+ E++ G+ P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 10 SQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGI-AKFLKPDSS 68
SQ K DAL+YLH + I+HRDL + N+L L+ + +ADFG+ AK +
Sbjct: 108 SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQ 164
Query: 69 NWTEFAGTYGYVAPELAYTMKITE-----KCDVYSFGVLALEVIKGKHP 112
F GT ++APE+ + K DV+S G+ +E+ + + P
Sbjct: 165 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 113 IAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 169
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L E++ G+ P + T+ E+ + L+
Sbjct: 170 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---------TNPEVIQNLER 220
Query: 137 --RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
R+ P + E+L ++++ C E PE RPT
Sbjct: 221 GYRMVRPD-NCPEELYQLMRL---CWKERPEDRPTF 252
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 15/120 (12%)
Query: 5 QELDWSQR----MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLL--DLEYEAHVADFG 58
+ LD+ QR N ++ + AL YLH+ I HRD+ +N L + +E + DFG
Sbjct: 159 ESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFG 215
Query: 59 IAK-FLKPDSSNW---TEFAGTYGYVAPELAYTMK--ITEKCDVYSFGVLALEVIKGKHP 112
++K F K ++ + T AGT +VAPE+ T KCD +S GVL ++ G P
Sbjct: 216 LSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ T AG
Sbjct: 118 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKF 172
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L L++
Sbjct: 173 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL-----LEK- 225
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 226 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 262
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL YLH +V+RD+ +NL+LD + + DFG+ K D + F GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ D + GV+ E++ G+ P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL YLH +V+RD+ +NL+LD + + DFG+ K D + F GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ D + GV+ E++ G+ P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL YLH +V+RD+ +NL+LD + + DFG+ K D + F GT
Sbjct: 117 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 173
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ D + GV+ E++ G+ P
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL YLH +V+RD+ +NL+LD + + DFG+ K D + F GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ D + GV+ E++ G+ P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T ++ +ADAL Y H ++HRD+ +NLL+ + E +ADFG + + S
Sbjct: 114 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLR 168
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRD 114
GT Y+ PE+ EK D++ GVL E + G P D
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 22/162 (13%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 118 ISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--FTAHAGAKF 172
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEM 133
+ APE LAY K + K DV++FGVL E+ G P + L L++
Sbjct: 173 PIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYEL-----LEK- 225
Query: 134 LDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
D R+ P EK+ +++ +C +P RP+ + Q
Sbjct: 226 -DYRMERP-EGCPEKVYELMR---ACWQWNPSDRPSFAEIHQ 262
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T ++ +ADAL Y H ++HRD+ +NLL+ + E +ADFG + + S
Sbjct: 115 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLR 169
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRD 114
GT Y+ PE+ EK D++ GVL E + G P D
Sbjct: 170 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 14 NTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLE---YEAHVADFGIAKFLKPDSSNW 70
N +K + + YLH IVHRD+ +N+LL+ + + DFG++ F D
Sbjct: 150 NIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-L 205
Query: 71 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
+ GT Y+APE+ K EKCDV+S GV+ ++ G P
Sbjct: 206 RDRLGTAYYIAPEVL-KKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 14 NTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA---HVADFGIAKFLKPDSSNW 70
+ I+ + ++++Y H + IVHR+L +NLLL + + +ADFG+A + DS W
Sbjct: 109 HCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAW 164
Query: 71 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
FAGT GY++PE+ ++ D+++ GV+ ++ G P
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS----SNWTEFA 74
VA + YL F VHRDL+++N +LD ++ VADFG+A+ + N T
Sbjct: 160 VAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 216
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 217 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS----SNWTEFA 74
VA + YL F VHRDL+++N +LD ++ VADFG+A+ + N T
Sbjct: 161 VAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 217
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 218 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS----SNWTEFA 74
VA + YL F VHRDL+++N +LD ++ VADFG+A+ + N T
Sbjct: 142 VAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS----SNWTEFA 74
VA + YL F VHRDL+++N +LD ++ VADFG+A+ + N T
Sbjct: 134 VAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 190
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 191 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 18 GVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY 77
V ALS LH ++HRD+ S ++LL + ++DFG + + GT
Sbjct: 128 AVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTP 184
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APEL + + D++S G++ +E++ G+ P
Sbjct: 185 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 14 NTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA---HVADFGIAKFLKPDSSNW 70
+ I+ + ++++Y H + IVHR+L +NLLL + + +ADFG+A + DS W
Sbjct: 108 HCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAW 163
Query: 71 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
FAGT GY++PE+ ++ D+++ GV+ ++ G P
Sbjct: 164 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS----SNWTEFA 74
VA + YL F VHRDL+++N +LD ++ VADFG+A+ + N T
Sbjct: 139 VAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 195
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 196 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 11 QRMNT-IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR T ++ +ADAL Y H ++HRD+ +NLL+ + E +ADFG + + S
Sbjct: 114 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLR 168
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRD 114
GT Y+ PE+ EK D++ GVL E + G P D
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 14 NTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA---HVADFGIAKFLKPDSSNW 70
+ I+ + ++++Y H + IVHR+L +NLLL + + +ADFG+A + DS W
Sbjct: 109 HCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAW 164
Query: 71 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
FAGT GY++PE+ ++ D+++ GV+ ++ G P
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++Y+ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 119 IAEGMAYIERKNY---IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 175
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L E++ GK P N D+
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP-------YPGRTNADVMTALSQGY 228
Query: 137 RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
R+P + ++L I+K+ C E E RPT
Sbjct: 229 RMPR-VENCPDELYDIMKM---CWKEKAEERPTF 258
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ A+ Y H IVHRDL ++NLLLD + +ADFG + F G+
Sbjct: 120 IVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDTFCGSPP 175
Query: 79 YVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 114
Y APEL K + DV+S GV+ ++ G P D
Sbjct: 176 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGT 76
+A + YL +VHR+L+++N+LL + VADFG+A L PD ++E
Sbjct: 142 IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 198
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++A E + K T + DV+S+GV E++
Sbjct: 199 IKWMALESIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS----SNWTEFA 74
VA + YL F VHRDL+++N +LD ++ VADFG+A+ + N T
Sbjct: 142 VAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 20/156 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HRDL + N+L+ +ADFG+A+ ++ E A
Sbjct: 118 IAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI 174
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L E++ G+ P + T+ E+ + L+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---------TNPEVIQNLER 225
Query: 137 --RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
R+ P + E+L ++++ C E PE RPT
Sbjct: 226 GYRMVRPD-NCPEELYQLMRL---CWKERPEDRPTF 257
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS----SNWTEFA 74
VA + YL F VHRDL+++N +LD ++ VADFG+A+ + N T
Sbjct: 141 VAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 197
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS----SNWTEFA 74
VA + YL F VHRDL+++N +LD ++ VADFG+A+ + N T
Sbjct: 140 VAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 196
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS----SNWTEFA 74
VA + YL F VHRDL+++N +LD ++ VADFG+A+ + N T
Sbjct: 137 VAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 193
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 194 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 17/155 (10%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAG 75
VA+ + YL F +HRDL+++NLLL + DFG+ + L + ++
Sbjct: 124 VAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEML 134
+ + APE T + D + FGV E+ G+ P ++ L+ + E
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE-- 236
Query: 135 DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
RLP P Q+ I V C PE RPT
Sbjct: 237 --RLPRPEDCPQD----IYNVMVQCWAHKPEDRPT 265
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
IV+RDL +N+LLD ++D G+A + P+ GT GY+APE+ + T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ G L E+I G+ P
Sbjct: 366 PDWWALGCLLYEMIAGQSP 384
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
IV+RDL +N+LLD ++D G+A + P+ GT GY+APE+ + T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ G L E+I G+ P
Sbjct: 366 PDWWALGCLLYEMIAGQSP 384
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGT 76
+A + YL +VHR+L+++N+LL + VADFG+A L PD ++E
Sbjct: 124 IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++A E + K T + DV+S+GV E++
Sbjct: 181 IKWMALESIHFGKYTHQSDVWSYGVTVWELM 211
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
+ + A+ Y H IVHRDL ++NLLLD + +ADFG + + F G
Sbjct: 119 FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCG 174
Query: 76 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 114
+ Y APEL K + DV+S GV+ ++ G P D
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
+ + A+ Y H IVHRDL ++NLLLD + +ADFG + + F G
Sbjct: 119 FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCG 174
Query: 76 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 114
+ Y APEL K + DV+S GV+ ++ G P D
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
+ + A+ Y H IVHRDL ++NLLLD + +ADFG + + F G
Sbjct: 119 FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCG 174
Query: 76 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 114
+ Y APEL K + DV+S GV+ ++ G P D
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT 76
+ + A+ Y H IVHRDL ++NLLLD + +ADFG + F G
Sbjct: 121 RQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGA 176
Query: 77 YGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 114
Y APEL K + DV+S GV+ ++ G P D
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT 76
+ + A+ Y H IVHRDL ++NLLLD + +ADFG + + F G+
Sbjct: 121 RQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTV-GNKLDTFCGS 176
Query: 77 YGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 114
Y APEL K + DV+S GV+ ++ G P D
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
++ AL +LH I++RDL +N++L+ + + DFG+ K D + F GT
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIE 186
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDPRL 138
Y+APE+ D +S G L +++ G P F ++ ++ L P L
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP--FTGENRKKTIDKILKCKLNLPPYL 244
Query: 139 PAPSRSVQEKLISIVKVAFSCLNESP 164
+R + +KL+ + A S L P
Sbjct: 245 TQEARDLLKKLLK--RNAASRLGAGP 268
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 17/155 (10%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAG 75
VA+ + YL F +HRDL+++NLLL + DFG+ + L + ++
Sbjct: 120 VAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEML 134
+ + APE T + D + FGV E+ G+ P ++ L+ + E
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE-- 232
Query: 135 DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
RLP P Q+ I V C PE RPT
Sbjct: 233 --RLPRPEDCPQD----IYNVMVQCWAHKPEDRPT 261
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 24/161 (14%)
Query: 18 GVADALSYLH-HDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT 76
G L+YLH H+ ++HRD+ + N+LL + DFG A + P + F GT
Sbjct: 162 GALQGLAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGT 213
Query: 77 YGYVAPELAYTM---KITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEM 133
++APE+ M + K DV+S G+ +E+ + K P +N L +
Sbjct: 214 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP--------LFNMNAMSALYHI 265
Query: 134 LDPRLPA-PSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
PA S E + V SCL + P+ RPT +++
Sbjct: 266 AQNESPALQSGHWSEYFRNFVD---SCLQKIPQDRPTSEVL 303
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
+ + A+ Y H IVHRDL ++NLLLD + +ADFG + + F G
Sbjct: 112 FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCG 167
Query: 76 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 114
+ Y APEL K + DV+S GV+ ++ G P D
Sbjct: 168 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
++ AL +LH I++RDL +N++L+ + + DFG+ K D + F GT
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIE 186
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDPRL 138
Y+APE+ D +S G L +++ G P F ++ ++ L P L
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP--FTGENRKKTIDKILKCKLNLPPYL 244
Query: 139 PAPSRSVQEKLISIVKVAFSCLNESP 164
+R + +KL+ + A S L P
Sbjct: 245 TQEARDLLKKLLK--RNAASRLGAGP 268
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 257
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 17/155 (10%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAG 75
VA+ + YL F +HRDL+++NLLL + DFG+ + L + ++
Sbjct: 124 VAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEML 134
+ + APE T + D + FGV E+ G+ P ++ L+ + E
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE-- 236
Query: 135 DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
RLP P Q+ I V C PE RPT
Sbjct: 237 --RLPRPEDCPQD----IYNVMVQCWAHKPEDRPT 265
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 17/155 (10%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAG 75
VA+ + YL F +HRDL+++NLLL + DFG+ + L + ++
Sbjct: 130 VAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 186
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEML 134
+ + APE T + D + FGV E+ G+ P ++ L+ + E
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE-- 242
Query: 135 DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
RLP P Q+ I V C PE RPT
Sbjct: 243 --RLPRPEDCPQD----IYNVMVQCWAHKPEDRPT 271
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 36/161 (22%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
LS+LH ++HRD+ +N+LL E + DFG++ L F GT ++A
Sbjct: 141 GLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMA 197
Query: 82 PELAYTMKITE-----KCDVYSFGVLALEVIKGK------HPRDFLXXXXXXXLNTDIEL 130
PE+ + + K D++S G+ A+E+ +G HP L
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL-------------- 243
Query: 131 DEMLDPRLPAP---SRSVQEKLISIVKVAFSCLNESPESRP 168
L PR PAP S+ +K S ++ SCL ++ RP
Sbjct: 244 --FLIPRNPAPRLKSKKWSKKFQSFIE---SCLVKNHSQRP 279
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 17/155 (10%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAG 75
VA+ + YL F +HRDL+++NLLL + DFG+ + L + ++
Sbjct: 120 VAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEML 134
+ + APE T + D + FGV E+ G+ P ++ L+ + E
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE-- 232
Query: 135 DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
RLP P Q+ I V C PE RPT
Sbjct: 233 --RLPRPEDCPQD----IYNVMVQCWAHKPEDRPT 261
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 239
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDC--------FPPIVHRDLSSKNLLLDLEYEAHVADFG 58
+ W++ + + ++ LSYLH D P I HRD SKN+LL + A +ADFG
Sbjct: 109 ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFG 168
Query: 59 IAKFLKPDS--SNWTEFAGTYGYVAPE-----LAYTMKITEKCDVYSFGVLALEVI 107
+A +P + GT Y+APE + + + D+Y+ G++ E++
Sbjct: 169 LAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 24/161 (14%)
Query: 18 GVADALSYLH-HDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT 76
G L+YLH H+ ++HRD+ + N+LL + DFG A + P + F GT
Sbjct: 123 GALQGLAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGT 174
Query: 77 YGYVAPELAYTM---KITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEM 133
++APE+ M + K DV+S G+ +E+ + K P +N L +
Sbjct: 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP--------LFNMNAMSALYHI 226
Query: 134 LDPRLPA-PSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
PA S E + V SCL + P+ RPT +++
Sbjct: 227 AQNESPALQSGHWSEYFRNFVD---SCLQKIPQDRPTSEVL 264
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 141 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 245
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 237
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 239
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 4 AQELDWSQRMNTIKGVADALSYLHHDC-------FPPIVHRDLSSKNLLLDLEYEAHVAD 56
A + W++ + + +A L+YLH D P I HRD+ SKN+LL A +AD
Sbjct: 115 ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174
Query: 57 FGIA-KFLKPDSSNWTEF-AGTYGYVAPE-----LAYTMKITEKCDVYSFGVLALEV 106
FG+A KF S+ T GT Y+APE + + + D+Y+ G++ E+
Sbjct: 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 131 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 235
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 131 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 235
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 239
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 257
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA--KFLKPDSSNWTEFA 74
+ A + YLH I+HRDL S N+ L + + DFG+A K S + + +
Sbjct: 138 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 194
Query: 75 GTYGYVAPELAYTMKITEK------CDVYSFGVLALEVIKGKHP 112
G+ ++APE+ +++ +K DVY+FG++ E++ G+ P
Sbjct: 195 GSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA--KFLKPDSSNWTEFA 74
+ A + YLH I+HRDL S N+ L + + DFG+A K S + + +
Sbjct: 131 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 187
Query: 75 GTYGYVAPELAYTMKITEK------CDVYSFGVLALEVIKGKHP 112
G+ ++APE+ +++ +K DVY+FG++ E++ G+ P
Sbjct: 188 GSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA--KFLKPDSSNWTEFA 74
+ A + YLH I+HRDL S N+ L + + DFG+A K S + + +
Sbjct: 139 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 195
Query: 75 GTYGYVAPELAYTMKITEK------CDVYSFGVLALEVIKGKHP 112
G+ ++APE+ +++ +K DVY+FG++ E++ G+ P
Sbjct: 196 GSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 138 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 242
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 139 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 243
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 130 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 234
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + TE+
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA--KFLKPDSSNWTEFA 74
+ A + YLH I+HRDL S N+ L + + DFG+A K S + + +
Sbjct: 139 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 195
Query: 75 GTYGYVAPELAYTMKITEK------CDVYSFGVLALEVIKGKHP 112
G+ ++APE+ +++ +K DVY+FG++ E++ G+ P
Sbjct: 196 GSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+A AL YLH IV+RDL +N+LLD + + DFG+ K +S + F GT
Sbjct: 148 IASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPE 204
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ + D + G + E++ G P
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
+ + A+ Y H IVHRDL ++NLLLD + +ADFG + + F G
Sbjct: 119 FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDAFCG 174
Query: 76 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 114
Y APEL K + DV+S GV+ ++ G P D
Sbjct: 175 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA--KFLKPDSSNWTEFA 74
+ A + YLH I+HRDL S N+ L + + DFG+A K S + + +
Sbjct: 113 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 169
Query: 75 GTYGYVAPELAYTMKITEK------CDVYSFGVLALEVIKGKHP 112
G+ ++APE+ +++ +K DVY+FG++ E++ G+ P
Sbjct: 170 GSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA- 60
A+ + + + ++ + A + YLH I+HRDL S N+ L + + DFG+A
Sbjct: 100 ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLAT 156
Query: 61 -KFLKPDSSNWTEFAGTYGYVAPELAYTMK---ITEKCDVYSFGVLALEVIKGKHP 112
K S + + +G+ ++APE+ + + DVY+FG++ E++ G+ P
Sbjct: 157 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++++ + +HR+L + N+L+ +ADFG+A+ ++ + E A
Sbjct: 114 IAEGMAFIEERNY---IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 170
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K DV+SFG+L E++ G+ P + T+ E+ + L+
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---------TNPEVIQNLER 221
Query: 137 --RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
R+ P + E+L ++++ C E PE RPT
Sbjct: 222 GYRMVRPD-NCPEELYQLMRL---CWKERPEDRPTF 253
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFL---KPDS-SNWTEFA 74
VA + +L F VHRDL+++N +LD ++ VADFG+A+ + + DS N T
Sbjct: 143 VAKGMKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAK 199
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFL---KPDS-SNWTEFA 74
VA + +L F VHRDL+++N +LD ++ VADFG+A+ + + DS N T
Sbjct: 143 VAKGMKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 199
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 17/118 (14%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCF-----PPIVHRDLSSKNLLLDLEYEAHVADFGIAK 61
LD + + +A L++LH + F P I HRDL SKN+L+ + +AD G+A
Sbjct: 131 LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA- 189
Query: 62 FLKPDSSNWTEFA-----GTYGYVAPE-LAYTMKIT-----EKCDVYSFGVLALEVIK 108
+ S+N + GT Y+APE L T+++ ++ D+++FG++ EV +
Sbjct: 190 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 247
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA--KFLKPDSSNWTEFA 74
+ A + YLH I+HRDL S N+ L + + DFG+A K S + + +
Sbjct: 111 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 167
Query: 75 GTYGYVAPELAYTMKITEK------CDVYSFGVLALEVIKGKHP 112
G+ ++APE+ +++ +K DVY+FG++ E++ G+ P
Sbjct: 168 GSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA--KFLKPDSSNWTEFA 74
+ A + YLH I+HRDL S N+ L + + DFG+A K S + + +
Sbjct: 111 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
Query: 75 GTYGYVAPELAYTMKITEK------CDVYSFGVLALEVIKGKHP 112
G+ ++APE+ +++ +K DVY+FG++ E++ G+ P
Sbjct: 168 GSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFL---KPDS-SNWTEFA 74
VA + +L F VHRDL+++N +LD ++ VADFG+A+ + + DS N T
Sbjct: 201 VAKGMKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 257
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 258 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA--KFLKPDSSNWTEFA 74
+ A + YLH I+HRDL S N+ L + + DFG+A K S + + +
Sbjct: 116 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
Query: 75 GTYGYVAPELAYTMKITEK------CDVYSFGVLALEVIKGKHP 112
G+ ++APE+ +++ +K DVY+FG++ E++ G+ P
Sbjct: 173 GSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFL---KPDS-SNWTEFA 74
VA + +L F VHRDL+++N +LD ++ VADFG+A+ + + DS N T
Sbjct: 140 VAKGMKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 196
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 10 SQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
SQ K DAL+YLH + I+HRDL + N+L L+ + +ADFG++
Sbjct: 135 SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR 191
Query: 70 WTEFAGTYGYVAPELAYTMKITE-----KCDVYSFGVLALEVIKGKHP 112
F GT ++APE+ + K DV+S G+ +E+ + + P
Sbjct: 192 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA--KFLKPDSSNWTEFA 74
+ A + YLH I+HRDL S N+ L + + DFG+A K S + + +
Sbjct: 111 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
Query: 75 GTYGYVAPELAYTMKITEK------CDVYSFGVLALEVIKGKHP 112
G+ ++APE+ +++ +K DVY+FG++ E++ G+ P
Sbjct: 168 GSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 17/118 (14%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCF-----PPIVHRDLSSKNLLLDLEYEAHVADFGIAK 61
LD + + +A L++LH + F P I HRDL SKN+L+ + +AD G+A
Sbjct: 102 LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA- 160
Query: 62 FLKPDSSNWTEFA-----GTYGYVAPE-LAYTMKIT-----EKCDVYSFGVLALEVIK 108
+ S+N + GT Y+APE L T+++ ++ D+++FG++ EV +
Sbjct: 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 218
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 17/118 (14%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCF-----PPIVHRDLSSKNLLLDLEYEAHVADFGIAK 61
LD + + +A L++LH + F P I HRDL SKN+L+ + +AD G+A
Sbjct: 102 LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA- 160
Query: 62 FLKPDSSNWTEFA-----GTYGYVAPE-LAYTMKIT-----EKCDVYSFGVLALEVIK 108
+ S+N + GT Y+APE L T+++ ++ D+++FG++ EV +
Sbjct: 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 218
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA--KFLKPDSSNWTEFA 74
+ A + YLH I+HRDL S N+ L + + DFG+A K S + + +
Sbjct: 116 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
Query: 75 GTYGYVAPELAYTMKITEK------CDVYSFGVLALEVIKGKHP 112
G+ ++APE+ +++ +K DVY+FG++ E++ G+ P
Sbjct: 173 GSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFL---KPDS-SNWTEFA 74
VA + +L F VHRDL+++N +LD ++ VADFG+A+ + + DS N T
Sbjct: 142 VAKGMKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 198
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 10 SQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
SQ K DAL+YLH + I+HRDL + N+L L+ + +ADFG++
Sbjct: 135 SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR 191
Query: 70 WTEFAGTYGYVAPELAYTMKITE-----KCDVYSFGVLALEVIKGKHP 112
F GT ++APE+ + K DV+S G+ +E+ + + P
Sbjct: 192 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA- 60
A+ + + + ++ + A + YLH I+HRDL S N+ L + + DFG+A
Sbjct: 112 ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLAT 168
Query: 61 -KFLKPDSSNWTEFAGTYGYVAPELAYTMK---ITEKCDVYSFGVLALEVIKGKHP 112
K S + + +G+ ++APE+ + + DVY+FG++ E++ G+ P
Sbjct: 169 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFL---KPDS-SNWTEFA 74
VA + +L F VHRDL+++N +LD ++ VADFG+A+ + + DS N T
Sbjct: 142 VAKGMKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 198
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 10 SQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
SQ K DAL+YLH + I+HRDL + N+L L+ + +ADFG++
Sbjct: 135 SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR 191
Query: 70 WTEFAGTYGYVAPELAYTMKITE-----KCDVYSFGVLALEVIKGKHP 112
F GT ++APE+ + K DV+S G+ +E+ + + P
Sbjct: 192 RDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFL---KPDS-SNWTEFA 74
VA + +L F VHRDL+++N +LD ++ VADFG+A+ + + DS N T
Sbjct: 147 VAKGMKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 203
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++A E T K T K DV+SFGVL E++ P
Sbjct: 204 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA- 60
A+ + + + ++ + A + YLH I+HRDL S N+ L + + DFG+A
Sbjct: 112 ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLAT 168
Query: 61 -KFLKPDSSNWTEFAGTYGYVAPELAYTMK---ITEKCDVYSFGVLALEVIKGKHP 112
K S + + +G+ ++APE+ + + DVY+FG++ E++ G+ P
Sbjct: 169 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
+ + A+ Y H IVHRDL ++NLLLD + +ADFG + + F G
Sbjct: 119 FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF-TFGNKLDAFCG 174
Query: 76 TYGYVAPELAYTMKI-TEKCDVYSFGVLALEVIKGKHPRD 114
Y APEL K + DV+S GV+ ++ G P D
Sbjct: 175 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K + WT GT Y+A
Sbjct: 174 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GATWT-LCGTPEYLA 227
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A +SYL +VHRDL+++N+L+ + DFG+A+ L D + +
Sbjct: 122 LNWCMQIAKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA 178
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E + T + DV+S+GV E++ G P D + E
Sbjct: 179 DGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR---------E 229
Query: 130 LDEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK-IVSQQLRI 179
+ ++L+ RLP P I + + C E RP + +VS+ R+
Sbjct: 230 IPDLLEKGERLPQPPICT----IDVYMIMVKCWMIDSECRPRFRELVSEFSRM 278
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYE---AHVADFGIAKFLKPDSSNWTE 72
I+ V ++Y+H + IVHRDL +NLLL+ + + + DFG++ + S +
Sbjct: 132 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKD 187
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ + EKCDV+S GV+ ++ G P
Sbjct: 188 KIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
V +A+ YL + F VHRDL+++N+L+ + A V+DFG+ K ++ T+ G
Sbjct: 111 VCEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLP 162
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEV 106
+ APE K + K DV+SFG+L E+
Sbjct: 163 VKWTAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
V +A+ YL + F VHRDL+++N+L+ + A V+DFG+ K ++ T+ G
Sbjct: 126 VCEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLP 177
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
+ APE K + K DV+SFG+L E+
Sbjct: 178 VKWTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYE---AHVADFGIAKFLKPDSSNWTE 72
I+ V ++Y+H + IVHRDL +NLLL+ + + + DFG++ + S +
Sbjct: 155 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKD 210
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ + EKCDV+S GV+ ++ G P
Sbjct: 211 KIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 249
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 166 IHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 225
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 226 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPE--- 275
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 276 -MYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYE---AHVADFGIAKFLKPDSSNWTE 72
I+ V ++Y+H + IVHRDL +NLLL+ + + + DFG++ + S +
Sbjct: 156 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKD 211
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ + EKCDV+S GV+ ++ G P
Sbjct: 212 KIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 250
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
V +A+ YL + F VHRDL+++N+L+ + A V+DFG+ K ++ T+ G
Sbjct: 298 VCEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLP 349
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
+ APE K + K DV+SFG+L E+
Sbjct: 350 VKWTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYE---AHVADFGIAKFLKPDSSNWTE 72
I+ V ++Y+H + IVHRDL +NLLL+ + + + DFG++ + S +
Sbjct: 138 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKD 193
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ + EKCDV+S GV+ ++ G P
Sbjct: 194 KIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 232
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 230 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 279
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 280 -MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 3 AAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKF 62
A EL SQ ++ +A + YL F VHRDL+++N L+ + DFG+++
Sbjct: 126 AKGELGLSQMLHIASQIASGMVYLASQHF---VHRDLATRNCLVGANLLVKIGDFGMSRD 182
Query: 63 LKPDSSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
+ S+++ G ++ PE K T + DV+SFGV+ E+ GK P
Sbjct: 183 VY--STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K WT GT Y+APE+ + +
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAPEIILSKGYNKA 204
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 205 VDWWALGVLIYEMAAGYPP 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K WT GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAPEIILSKGYNKA 219
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 172 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 231
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 232 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 281
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 282 -MYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 221 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 270
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 271 -MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 230 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 279
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 280 -MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
++ A+ YL F +HRDL+++N L+ + VADFG+++ + D+ +T AG
Sbjct: 139 ISSAMEYLEKKNF---IHRDLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKF 193
Query: 77 -YGYVAPE-LAYTMKITEKCDVYSFGVLALEV 106
+ APE LAY + K DV++FGVL E+
Sbjct: 194 PIKWTAPESLAYN-TFSIKSDVWAFGVLLWEI 224
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 16/153 (10%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG-TY 77
+A+ ++Y+ + +HRDL + N+L+ +ADFG+A+ ++ + E A
Sbjct: 118 IAEGMAYIERKNY---IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 174
Query: 78 GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP 136
+ APE T K +V+SFG+L E++ GK P N D+
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP-------YPGRTNADVMSALSQGY 227
Query: 137 RLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
R+P + ++L I+K+ C E E RPT
Sbjct: 228 RMPR-MENCPDELYDIMKM---CWKEKAEERPT 256
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAG 75
VA+ + YL F +HRDL+++NLLL + DFG+ + L + +
Sbjct: 120 VAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 176
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEML 134
+ + APE T + D + FGV E+ G+ P ++ L+ + E
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE-- 232
Query: 135 DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
RLP P Q+ I V C PE RPT
Sbjct: 233 --RLPRPEDCPQD----IYNVMVQCWAHKPEDRPT 261
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAG 75
VA+ + YL F +HRDL+++NLLL + DFG+ + L + +
Sbjct: 130 VAEGMGYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 186
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEML 134
+ + APE T + D + FGV E+ G+ P ++ L+ + E
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP--WIGLNGSQILHKIDKEGE-- 242
Query: 135 DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
RLP P Q+ I V C PE RPT
Sbjct: 243 --RLPRPEDCPQD----IYNVMVQCWAHKPEDRPT 271
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 21/183 (11%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA 60
D A L Q + VA + YL F VHRDL+++N L+ + DFG++
Sbjct: 149 DVAPGPLGLGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMS 205
Query: 61 KFLKPDSSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDF 115
+ + S+++ G ++ PE K T + DV+SFGV+ E+ GK P +
Sbjct: 206 RDIY--STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP--W 261
Query: 116 LXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
++ + E+ PR P + + C P+ R ++K V
Sbjct: 262 YQLSNTEAIDCITQGRELERPRACPP---------EVYAIMRGCWQREPQQRHSIKDVHA 312
Query: 176 QLR 178
+L+
Sbjct: 313 RLQ 315
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W AGT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LAGTPEYLA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 221 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 270
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 271 -MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 21/183 (11%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA 60
D A L Q + VA + YL F VHRDL+++N L+ + DFG++
Sbjct: 126 DVAPGPLGLGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMS 182
Query: 61 KFLKPDSSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDF 115
+ + S+++ G ++ PE K T + DV+SFGV+ E+ GK P +
Sbjct: 183 RDIY--STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP--W 238
Query: 116 LXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
++ + E+ PR P + + C P+ R ++K V
Sbjct: 239 YQLSNTEAIDCITQGRELERPRACPP---------EVYAIMRGCWQREPQQRHSIKDVHA 289
Query: 176 QLR 178
+L+
Sbjct: 290 RLQ 292
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 21/183 (11%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA 60
D A L Q + VA + YL F VHRDL+++N L+ + DFG++
Sbjct: 120 DVAPGPLGLGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMS 176
Query: 61 KFLKPDSSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDF 115
+ + S+++ G ++ PE K T + DV+SFGV+ E+ GK P +
Sbjct: 177 RDIY--STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP--W 232
Query: 116 LXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
++ + E+ PR P + + C P+ R ++K V
Sbjct: 233 YQLSNTEAIDCITQGRELERPRACPP---------EVYAIMRGCWQREPQQRHSIKDVHA 283
Query: 176 QLR 178
+L+
Sbjct: 284 RLQ 286
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 166 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 225
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 226 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 275
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 276 -MYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 275 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 324
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 325 -MYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 282 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 331
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 332 -MYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 207 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 266
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 267 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 316
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 317 -MYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 273 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 322
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 323 -MYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 14 NTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA---HVADFGIAKFLKPDSSNW 70
+ I+ + +A+ + H +VHRDL +NLLL + + +ADFG+A ++ + W
Sbjct: 125 HCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW 181
Query: 71 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
FAGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 182 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 280 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 329
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 330 -MYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLK--PDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 230 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 279
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 280 -MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLK--PDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 230 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 279
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 280 -MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLK--PDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 230 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 279
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 280 -MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLK--PDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 221 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 270
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 271 -MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 21 DALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA-GTYGY 79
D++ LH+ VHRD+ N+LLD+ +ADFG + D + + A GT Y
Sbjct: 189 DSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 242
Query: 80 VAPELAYTM-----KITEKCDVYSFGVLALEVIKGKHP 112
++PE+ M K +CD +S GV E++ G+ P
Sbjct: 243 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLK--PDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 93 KCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML--DPRLPAPSRSVQEKLI 150
+ DV+SFGVL E+ L + D E L R+ AP + E
Sbjct: 221 QSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE--- 270
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ + C + P RPT + + L
Sbjct: 271 -MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLD---LEYEAHVADFGIAKFLKPDSSNWTE 72
IK V ++Y+H IVHRDL +N+LL+ + + + DFG++ + ++ +
Sbjct: 127 IKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKD 182
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ EKCDV+S GV+ ++ G P
Sbjct: 183 RIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V L+YL I+HRD+ N+L++ E + DFG++ L +N F GT
Sbjct: 123 VLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRS 178
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE + + D++S G+ +E+ G++P
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 21 DALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA-GTYGY 79
D++ LH+ VHRD+ N+L+D+ +ADFG L D + + A GT Y
Sbjct: 189 DSVHQLHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDY 242
Query: 80 VAPELAYTM-----KITEKCDVYSFGVLALEVIKGKHP 112
++PE+ M + +CD +S GV E++ G+ P
Sbjct: 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + VADFG AK +K W GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + VADFG AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + VADFG AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + VADFG AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 21 DALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA-GTYGY 79
D++ LH+ VHRD+ N+LLD+ +ADFG + D + + A GT Y
Sbjct: 205 DSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 258
Query: 80 VAPELAYTM-----KITEKCDVYSFGVLALEVIKGKHP 112
++PE+ M K +CD +S GV E++ G+ P
Sbjct: 259 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 24/160 (15%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V L+YL I+HRD+ N+L++ E + DFG++ L +N F GT
Sbjct: 132 VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRS 187
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLD--- 135
Y++PE + + D++S G+ +E+ G++P + + + E+LD
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP--------IGSGSGSMAIFELLDYIV 239
Query: 136 ----PRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
P+LP+ S++ + CL ++P R +K
Sbjct: 240 NEPPPKLPSGVFSLEFQ-----DFVNKCLIKNPAERADLK 274
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 25/152 (16%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAK--FLKPDSSNWTEFAGTYGYVAPELAYTMKITE 92
+HRDL+++N+LL + DFG+A+ + PD + ++APE + +
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST 280
Query: 93 KCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDPRL------PAPSRSV 145
K DV+S+GVL E+ G P +++DE RL AP S
Sbjct: 281 KSDVWSYGVLLWEIFSLGGSP------------YPGVQMDEDFCSRLREGMRMRAPEYST 328
Query: 146 QEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E I ++ C + P+ RP + ++L
Sbjct: 329 PE----IYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN--WTEFAGTYGYVAPELAYTMKI- 90
I HRD+ +NLLLD ++DFG+A + ++ + GT YVAPEL +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 91 TEKCDVYSFGVLALEVIKGKHPRD 114
E DV+S G++ ++ G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 19 VADALSYL-HHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT- 76
VA +++L +C +HRDL+++N+LL + DFG+A+ +K DS+ +
Sbjct: 177 VAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARL 232
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLD 135
++APE + T + DV+S+G+ E+ L + D + +M+
Sbjct: 233 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS-------LGSSPYPGMPVDSKFYKMIK 285
Query: 136 P--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
R+ +P + E + I+K +C + P RPT K + Q
Sbjct: 286 EGFRMLSPEHAPAE-MYDIMK---TCWDADPLKRPTFKQIVQ 323
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYE---AHVADFGIAKFLKPDSSNWTE 72
I+ V ++Y H + IVHRDL +NLLL+ + + + DFG++ + S +
Sbjct: 132 IRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKXKD 187
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ + EKCDV+S GV+ ++ G P
Sbjct: 188 KIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 5 QELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK 64
Q LDW + + AL ++H I+HRD+ S+N+ L + + DFGIA+ L
Sbjct: 126 QILDWFVQ------ICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176
Query: 65 PDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKH 111
GT Y++PE+ K D+++ G + E+ KH
Sbjct: 177 STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH 223
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYE---AHVADFGIAKFLKPDSSNWTE 72
+K V +YLH IVHRDL +NLLL+ + + DFG++ + E
Sbjct: 110 MKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKE 165
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ K EKCDV+S GV+ ++ G P
Sbjct: 166 RLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
V +A+ YL + F VHRDL+++N+L+ + A V+DFG+ K ++ T+ G
Sbjct: 117 VCEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLP 168
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEV 106
+ APE + K DV+SFG+L E+
Sbjct: 169 VKWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V L+YL I+HRD+ N+L++ E + DFG++ L +N F GT
Sbjct: 175 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRS 230
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y++PE + + D++S G+ +E+ G++P
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A+ ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 117 LNWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 173
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 174 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 230
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 231 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 264
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V L+YL I+HRD+ N+L++ E + DFG++ L +N F GT
Sbjct: 140 VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRS 195
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y++PE + + D++S G+ +E+ G++P
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 94 CDVYSFGVLALEVIKG 109
D++S GV+ E+IKG
Sbjct: 206 VDIWSVGVIMGEMIKG 221
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 14 NTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDL---EYEAHVADFGIAKFLKPDSSNW 70
+ +K + +A++YLH + IVHRDL +NLL + +ADFG++K ++
Sbjct: 152 DAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208
Query: 71 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T GT GY APE+ + D++S G++ ++ G P
Sbjct: 209 T-VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYE---AHVADFGIAKFLKPDSSNWTE 72
+K V +YLH IVHRDL +NLLL+ + + DFG++ + E
Sbjct: 127 MKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGKMKE 182
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ K EKCDV+S GV+ ++ G P
Sbjct: 183 RLGTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 94 CDVYSFGVLALEVIKG 109
D++S GV+ E+IKG
Sbjct: 206 VDIWSVGVIMGEMIKG 221
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 19/182 (10%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK 61
A A+ +D + + + + YL + +HRDL+++N+L++ E + DFG+ K
Sbjct: 109 AHAERIDHIKLLQYTSQICKGMEYLGTKRY---IHRDLATRNILVENENRVKIGDFGLTK 165
Query: 62 FLKPDSSNWT---EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVI----KGKH-PR 113
L D + APE K + DV+SFGV+ E+ K K P
Sbjct: 166 VLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 225
Query: 114 DFLXXXXXXXLNTDI--ELDEML--DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
+F+ I L E+L + RLP P E I + C N + RP+
Sbjct: 226 EFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQRPS 281
Query: 170 MK 171
+
Sbjct: 282 FR 283
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLD---LEYEAHVADFGIAKFLKPDSSNWTE 72
IK V ++Y+H IVHRDL +N+LL+ + + + DFG++ + ++ +
Sbjct: 127 IKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKD 182
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ EKCDV+S GV+ ++ G P
Sbjct: 183 RIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V L+YL I+HRD+ N+L++ E + DFG++ L +N F GT
Sbjct: 113 VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRS 168
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y++PE + + D++S G+ +E+ G++P
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V L+YL I+HRD+ N+L++ E + DFG++ L +N F GT
Sbjct: 113 VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRS 168
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y++PE + + D++S G+ +E+ G++P
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLD---LEYEAHVADFGIAKFLKPDSSNWTE 72
IK V ++Y+H IVHRDL +N+LL+ + + + DFG++ + ++ +
Sbjct: 127 IKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKD 182
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ EKCDV+S GV+ ++ G P
Sbjct: 183 RIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V L+YL I+HRD+ N+L++ E + DFG++ L +N F GT
Sbjct: 113 VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRS 168
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y++PE + + D++S G+ +E+ G++P
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V L+YL I+HRD+ N+L++ E + DFG++ L +N F GT
Sbjct: 113 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRS 168
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y++PE + + D++S G+ +E+ G++P
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
V L+YL I+HRD+ N+L++ E + DFG++ L +N F GT
Sbjct: 113 VIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRS 168
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y++PE + + D++S G+ +E+ G++P
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 207
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 148 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 201
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 6 ELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKP 65
LD + + + + Y H +VHRDL +N+LLD A +ADFG++ +
Sbjct: 112 RLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS- 167
Query: 66 DSSNWTEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLALEVIKGKHPRD 114
D G+ Y APE ++ + + D++S GV+ ++ G P D
Sbjct: 168 DGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LXGTPEYLA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 211
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 212 VDWWALGVLIYEMAAGYPP 230
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 211
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 212 VDWWALGVLIYEMAAGYPP 230
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 14 NTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA---HVADFGIAKFLKPDSSNW 70
+ I+ + +A+ + H +VHR+L +NLLL + + +ADFG+A ++ + W
Sbjct: 114 HCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW 170
Query: 71 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
FAGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 171 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAG 75
+ + ++YLH + +HRDL+++N+LLD + + DFG+AK + + +
Sbjct: 143 ICEGMAYLHAQHY---IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDS 199
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVI-----KGKHPRDFLXXXXXXXLN-TDIE 129
+ APE K DV+SFGV E++ P FL T +
Sbjct: 200 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR 259
Query: 130 LDEMLD--PRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
L E+L+ RLP P + E + + +C RPT +
Sbjct: 260 LTELLERGERLPRPDKCPAE----VYHLMKNCWETEASFRPTFE 299
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 11/155 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL ++H ++HRD+ N+ + + D G+ +F ++ GT
Sbjct: 145 LCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY 201
Query: 79 YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDPRL 138
Y++PE + K D++S G L E+ + P + L IE +
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF-YGDKMNLYSLCKKIEQCDY----P 256
Query: 139 PAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIV 173
P PS E+L +V + C+N PE RP + V
Sbjct: 257 PLPSDHYSEELRQLVNM---CINPDPEKRPDVTYV 288
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 239
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 240 VDWWALGVLIYEMAAGYPP 258
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 174 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 227
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NLL+D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA----HVADFGIAKFLKPDSSNWTEFA 74
+ + YLH +VHRDL N+L E + DFG AK L+ ++
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T +VAPE+ E CD++S G+L ++ G P
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 21 DALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+ ++Y H ++HRDL +NLL++ E E +ADFG+A+ +T T Y
Sbjct: 111 NGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYR 167
Query: 81 APE-LAYTMKITEKCDVYSFGVLALEVIKG 109
AP+ L + K + D++S G + E++ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 21 DALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+ ++Y H ++HRDL +NLL++ E E +ADFG+A+ +T T Y
Sbjct: 111 NGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYR 167
Query: 81 APE-LAYTMKITEKCDVYSFGVLALEVIKG 109
AP+ L + K + D++S G + E++ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 11 QRMNTI-KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN 69
QR TI + +ADAL Y H ++HRD+ +NLLL L+ E +ADFG + + S
Sbjct: 123 QRTATIMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLR 177
Query: 70 WTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+ PE+ EK D++ GVL E++ G P
Sbjct: 178 RKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 121 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 178 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 234
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 235 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 268
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 122 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 235
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 236 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 269
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 122 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 235
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 236 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 269
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 121 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 178 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 234
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 235 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 268
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 233
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 234 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 267
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 233
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 234 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 267
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 19 VADALSYL-HHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT- 76
VA +++L +C +HRDL+++N+LL + DFG+A+ +K DS+ +
Sbjct: 154 VAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 209
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLD 135
++APE + T + DV+S+G+ E+ L + D + +M+
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS-------LGSSPYPGMPVDSKFYKMIK 262
Query: 136 P--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
R+ +P + E + I+K +C + P RPT K + Q
Sbjct: 263 EGFRMLSPEHAPAE-MYDIMK---TCWDADPLKRPTFKQIVQ 300
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 19 VADALSYL-HHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT- 76
VA +++L +C +HRDL+++N+LL + DFG+A+ +K DS+ +
Sbjct: 170 VAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 225
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLD 135
++APE + T + DV+S+G+ E+ L + D + +M+
Sbjct: 226 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS-------LGSSPYPGMPVDSKFYKMIK 278
Query: 136 P--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
R+ +P + E + I+K +C + P RPT K + Q
Sbjct: 279 EGFRMLSPEHAPAE-MYDIMK---TCWDADPLKRPTFKQIVQ 316
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 24/159 (15%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL +LH ++HRD+ N+L++ + + DFGI+ +L DS T AG
Sbjct: 162 IVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDAGCKP 218
Query: 79 YVAPEL--------AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIEL 130
Y+APE Y++ K D++S G+ +E+ + P D ++
Sbjct: 219 YMAPERINPELNQKGYSV----KSDIWSLGITMIELAILRFPYD----SWGTPFQQLKQV 270
Query: 131 DEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
E P+LPA S + V CL ++ + RPT
Sbjct: 271 VEEPSPQLPADKFSAE-----FVDFTSQCLKKNSKERPT 304
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 19 VADALSYL-HHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT- 76
VA +++L +C +HRDL+++N+LL + DFG+A+ +K DS+ +
Sbjct: 177 VAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 232
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLD 135
++APE + T + DV+S+G+ E+ L + D + +M+
Sbjct: 233 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS-------LGSSPYPGMPVDSKFYKMIK 285
Query: 136 P--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
R+ +P + E + I+K +C + P RPT K + Q
Sbjct: 286 EGFRMLSPEHAPAE-MYDIMK---TCWDADPLKRPTFKQIVQ 323
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NL++D + V DFG+AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 140 TFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 193
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 123 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 236
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 237 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 270
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 127 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 240
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 241 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 274
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 233
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 234 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 267
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 126 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 182
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 183 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 239
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 240 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 273
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 123 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 236
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 237 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 270
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 127 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 240
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 241 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 274
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 124 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 180
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 181 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 237
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 238 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 271
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 154 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 210
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 211 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 267
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 268 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 301
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 127 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 240
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 241 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 274
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 123 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 236
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 237 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 270
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 114 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 170
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 171 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 227
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 228 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 261
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFL--KPDSSNW--TEFAGTY 77
L Y+H ++HRDL NLL++ E + DFG+A+ L P + TE+ T
Sbjct: 171 GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 78 GYVAPELAYTM-KITEKCDVYSFGVLALEVI 107
Y APEL ++ + T+ D++S G + E++
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEML 258
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA----HVADFGIAKFLKPDSSNWTEFA 74
+ + YLH +VHRDL N+L E + DFG AK L+ ++
Sbjct: 130 IGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T +VAPE+ E CD++S G+L ++ G P
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 19 VADALSYL-HHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT- 76
VA +++L +C +HRDL+++N+LL + DFG+A+ +K DS+ +
Sbjct: 172 VAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 227
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLD 135
++APE + T + DV+S+G+ E+ L + D + +M+
Sbjct: 228 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS-------LGSSPYPGMPVDSKFYKMIK 280
Query: 136 P--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQ 175
R+ +P + E + I+K +C + P RPT K + Q
Sbjct: 281 EGFRMLSPEHAPAE-MYDIMK---TCWDADPLKRPTFKQIVQ 318
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKITE 92
I+HRDL +NLL++ + +ADFG+A+ ++T T Y AP+ L + K +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
Query: 93 KCDVYSFGVLALEVIKGK 110
D++S G + E+I GK
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKITE 92
I+HRDL +NLL++ + +ADFG+A+ ++T T Y AP+ L + K +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
Query: 93 KCDVYSFGVLALEVIKGK 110
D++S G + E+I GK
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 233
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 234 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 267
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLL++ + + DFG+A+ P+ + TE
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 257
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA--HVADFGIAKFLKPDSSNWTEFA 74
K + + L YLH + IVHRD+ N+L++ Y ++DFG +K L + F
Sbjct: 129 KQILEGLKYLHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFT 184
Query: 75 GTYGYVAPEL--AYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ + D++S G +E+ GK P
Sbjct: 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + E
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 241
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSN---WTEFAG 75
+ L Y+H ++HRDL NLLL+ + + DFG+A+ PD + E
Sbjct: 138 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 76 TYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIK------GKHPRDFL 116
T Y APE+ K T+ D++S G + E++ GKH D L
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 242
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 145 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 201
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 202 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 258
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 259 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 292
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 21 DALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+ ++Y H ++HRDL +NLL++ E E +ADFG+A+ +T T Y
Sbjct: 111 NGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYR 167
Query: 81 APE-LAYTMKITEKCDVYSFGVLALEVIKG 109
AP+ L + K + D++S G + E++ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ A+ Y H +VHRDL +N+LLD A +ADFG++ + D + G+
Sbjct: 120 ILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGSPN 175
Query: 79 YVAPE-LAYTMKITEKCDVYSFGVLALEVIKGKHPRD 114
Y APE ++ + + D++S GV+ ++ G P D
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFL--KPDSSNW--TEFAGTY 77
L Y+H ++HRDL NLL++ E + DFG+A+ L P + TE+ T
Sbjct: 170 GLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 78 GYVAPELAYTM-KITEKCDVYSFGVLALEVI 107
Y APEL ++ + T+ D++S G + E++
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEML 257
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NL++D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NL++D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
A+ Y H IVHRDL +NLLLD +ADFG++ + D + G+ Y A
Sbjct: 120 AIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAA 175
Query: 82 PE-LAYTMKITEKCDVYSFGVLALEVIKGKHPRD 114
PE + + + DV+S G++ ++ G+ P D
Sbjct: 176 PEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NL++D + V DFG+AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
IKG+ YLH + I+HRD+ NLL+ + +ADFG++ K + + G
Sbjct: 147 IKGI----EYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVG 199
Query: 76 TYGYVAPE-LAYTMKI--TEKCDVYSFGVLALEVIKGKHP 112
T ++APE L+ T KI + DV++ GV + G+ P
Sbjct: 200 TPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 233
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 234 KGE----RLPQPPICT----IDVYMIMRKCWMIDADSRPKFR 267
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 20/165 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA---- 74
+ + ++YLH + +HR L+++N+LLD + + DFG+AK + P+ +
Sbjct: 120 ICEGMAYLHAQHY---IHRALAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGD 175
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVI------KGKHPRDFLXXXXXXXLNTDI 128
+ APE K DV+SFGV E++ + H + T +
Sbjct: 176 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVL 235
Query: 129 ELDEMLD--PRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
L E+L+ RLP P R E I + +C RPT +
Sbjct: 236 RLTELLERGERLPRPDRCPCE----IYHLMKNCWETEASFRPTFQ 276
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 130 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 186
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 187 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 243
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 244 KGE----RLPQPPICT----IDVYMIMRKCWMIDADSRPKFR 277
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 4 AQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFL 63
++LD + + + + Y+H ++HRDL N+ L + + DFG+ L
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 64 KPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVI 107
K D T GT Y++PE + ++ D+Y+ G++ E++
Sbjct: 187 KNDGKR-TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 20/165 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA---- 74
+ + ++YLH + +HR L+++N+LLD + + DFG+AK + P+ +
Sbjct: 121 ICEGMAYLHAQHY---IHRALAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGD 176
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVI------KGKHPRDFLXXXXXXXLNTDI 128
+ APE K DV+SFGV E++ + H + T +
Sbjct: 177 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVL 236
Query: 129 ELDEMLD--PRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
L E+L+ RLP P R E I + +C RPT +
Sbjct: 237 RLTELLERGERLPRPDRCPCE----IYHLMKNCWETEASFRPTFQ 277
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL ++ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG+AK L + +
Sbjct: 123 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 236
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 237 KGE----RLPQPPICT----IDVYMIMRKCWMIDADSRPKFR 270
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA--HVADFGIAKFLKPDSSNWTEFA 74
K + + L YLH + IVHRD+ N+L++ Y ++DFG +K L + F
Sbjct: 115 KQILEGLKYLHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFT 170
Query: 75 GTYGYVAPEL--AYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ + D++S G +E+ GK P
Sbjct: 171 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 15/154 (9%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
VHRDL+++N+L++ E +ADFG+AK L D + + APE +
Sbjct: 136 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 195
Query: 92 EKCDVYSFGVLALEVI----KGKHPR-DFLXXXXXXX---LNTDIELDEMLDPRLPAPSR 143
+ DV+SFGV+ E+ K P +FL + + RLPAP
Sbjct: 196 RQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAPPA 255
Query: 144 SVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E + ++K+ C SP+ RP+ + QL
Sbjct: 256 CPAE-VHELMKL---CWAPSPQDRPSFSALGPQL 285
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NL++D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NL++D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLL---DLEYEAHVADFGIAKFLKPDSSNWTE 72
I+ V A+ YLH + IVHRDL +NLL + + + DFG++K + +
Sbjct: 112 IQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMST 166
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT GYVAPE+ ++ D +S GV+ ++ G P
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 15/154 (9%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
VHRDL+++N+L++ E +ADFG+AK L D + + APE +
Sbjct: 149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 208
Query: 92 EKCDVYSFGVLALEVI----KGKHPR-DFLXXXXXXX---LNTDIELDEMLDPRLPAPSR 143
+ DV+SFGV+ E+ K P +FL + + RLPAP
Sbjct: 209 RQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPA 268
Query: 144 SVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E + ++K+ C SP+ RP+ + QL
Sbjct: 269 CPAE-VHELMKL---CWAPSPQDRPSFSALGPQL 298
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NL++D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NL++D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NL++D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ + T +
Sbjct: 138 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TADEMTGYVA 191
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
+++RDL +NL++D + V DFG AK +K W GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 94 CDVYSFGVLALEVIKGKHP 112
D ++ GVL E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ + T +
Sbjct: 138 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TADEMTGYVA 191
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ + + F
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ + T +
Sbjct: 138 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TADEMTGYVA 191
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 20/165 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA---- 74
+ + ++YLH + +HR+L+++N+LLD + + DFG+AK + P+ +
Sbjct: 126 ICEGMAYLHSQHY---IHRNLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGD 181
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVI-----KGKHPRDFLXXXXXXXLN-TDI 128
+ APE K DV+SFGV E++ P FL T +
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL 241
Query: 129 ELDEMLD--PRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
L E+L+ RLP P + E + + +C RPT +
Sbjct: 242 RLTELLERGERLPRPDKCPCE----VYHLMKNCWETEASFRPTFE 282
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 88
+HRDL+++N+L+ +ADFG+A+ D +N + T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKNTTNGRLPVKWMAPEALFDR 234
Query: 89 KITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP--RLPAPSRSV 145
T + DV+SFGVL E+ G P + EL ++L R+ P+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---------ELFKLLKEGHRMDKPANCT 285
Query: 146 QEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E + + C + P RPT K + + L
Sbjct: 286 NE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 94 CDVYSFGVLALEVIKG 109
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 94 CDVYSFGVLALEVIKG 109
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ + + F
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 13/93 (13%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG---TYG 78
L Y+H I+HRDL NL ++ + E + DFG+A+ + DS E G T
Sbjct: 140 GLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADS----EMXGXVVTRW 190
Query: 79 YVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
Y APE+ M+ T+ D++S G + E+I GK
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ A+ Y H +VHRDL +N+LLD A +ADFG++ + D G+
Sbjct: 120 ILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSCGSPN 175
Query: 79 YVAPE-LAYTMKITEKCDVYSFGVLALEVIKGKHPRD 114
Y APE ++ + + D++S GV+ ++ G P D
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 16/149 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
+HRDL+++N+L++ E + DFG+ K L D + + APE K +
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFS 195
Query: 92 EKCDVYSFGVLALEVI----KGKH-PRDFLXXXXXXXLNTDI--ELDEML--DPRLPAPS 142
DV+SFGV+ E+ K K P +F+ I L E+L + RLP P
Sbjct: 196 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 255
Query: 143 RSVQEKLISIVKVAFSCLNESPESRPTMK 171
E I + C N + RP+ +
Sbjct: 256 GCPDE----IYMIMTECWNNNVNQRPSFR 280
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 136 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH---TDDEMTGYVA 189
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 94 CDVYSFGVLALEVIKG 109
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 24/159 (15%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL +LH ++HRD+ N+L++ + + DFGI+ +L D + + AG
Sbjct: 118 IVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AGCKP 174
Query: 79 YVAPEL--------AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIEL 130
Y+APE Y++ K D++S G+ +E+ + P D ++
Sbjct: 175 YMAPERINPELNQKGYSV----KSDIWSLGITMIELAILRFPYD----SWGTPFQQLKQV 226
Query: 131 DEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
E P+LPA S + V CL ++ + RPT
Sbjct: 227 VEEPSPQLPADKFSAE-----FVDFTSQCLKKNSKERPT 260
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 94 CDVYSFGVLALEVIKG 109
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 94 CDVYSFGVLALEVIKG 109
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNW--TEFAGTYGYVAPELAYTMKIT 91
I+HRDL N+++ + + DFG+A+ S+N+ T + T Y APE+ M
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVILGMGYK 201
Query: 92 EKCDVYSFGVLALEVIKG 109
E D++S G + E++KG
Sbjct: 202 ENVDIWSVGCIMGELVKG 219
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 136 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH---TDDEMTGYVA 189
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 142 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH---TDDEMTGYVA 195
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 94 CDVYSFGVLALEVIKG 109
D++S G + E+IKG
Sbjct: 207 VDIWSVGCIMGEMIKG 222
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 94 CDVYSFGVLALEVIKG 109
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 20/165 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA---- 74
+ + ++YLH + +HR+L+++N+LLD + + DFG+AK + P+ +
Sbjct: 126 ICEGMAYLHAQHY---IHRNLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGD 181
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVI-----KGKHPRDFLXXXXXXXLN-TDI 128
+ APE K DV+SFGV E++ P FL T +
Sbjct: 182 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL 241
Query: 129 ELDEMLD--PRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
L E+L+ RLP P + E + + +C RPT +
Sbjct: 242 RLTELLERGERLPRPDKCPCE----VYHLMKNCWETEASFRPTFE 282
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
VHRDL+++N+L++ E +ADFG+AK L D + + APE +
Sbjct: 137 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 196
Query: 92 EKCDVYSFGVLALEVI----KGKHPR-DFLXXXXXXXLNTDI------ELDEMLDPRLPA 140
+ DV+SFGV+ E+ K P +FL D+ RLPA
Sbjct: 197 RQSDVWSFGVVLYELFTYCDKSCSPSAEFL---RMMGCERDVPALCRLLELLEEGQRLPA 253
Query: 141 PSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
P E + ++K+ C SP+ RP+ + QL
Sbjct: 254 PPACPAE-VHELMKL---CWAPSPQDRPSFSALGPQL 286
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L Y+H I+HRDL N+ ++ + E + DFG+A + T + T Y A
Sbjct: 143 GLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLA---RQADEEMTGYVATRWYRA 196
Query: 82 PELAYT-MKITEKCDVYSFGVLALEVIKGK 110
PE+ M + D++S G + E+++GK
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ + T +
Sbjct: 137 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM---TGYVA 190
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L Y+H I+HRDL N+ ++ + E + DFG+A + T + T Y A
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLA---RQADEEMTGYVATRWYRA 196
Query: 82 PELAYT-MKITEKCDVYSFGVLALEVIKGK 110
PE+ M + D++S G + E+++GK
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ + + F
Sbjct: 127 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVA 180
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 133 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARH---TDDEMTGYVA 186
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L Y+H I+HRDL N+ ++ + E + DFG+A + T + T Y A
Sbjct: 135 GLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLA---RQADEEMTGYVATRWYRA 188
Query: 82 PELAYT-MKITEKCDVYSFGVLALEVIKGK 110
PE+ M + D++S G + E+++GK
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 88
+HRDL+++N+L+ +ADFG+A+ D +N + T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMRIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 89 KITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP--RLPAPSRSV 145
T + DV+SFGVL E+ G P + EL ++L R+ P+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---------ELFKLLKEGHRMDKPANCT 285
Query: 146 QEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E + + C + P RPT K + + L
Sbjct: 286 NE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 11 QRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNW 70
Q ++ + A + YLH I+HRD+ S N+ L + DFG+A S W
Sbjct: 133 QLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATV----KSRW 185
Query: 71 T------EFAGTYGYVAPELAYTMK---ITEKCDVYSFGVLALEVIKGKHP 112
+ + G+ ++APE+ + + DVYS+G++ E++ G+ P
Sbjct: 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S F T Y APE+ M E
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMVPFVVTRYYRAPEVILGMGYKEN 207
Query: 94 CDVYSFGVLALEVIKG 109
D++S G + E+IKG
Sbjct: 208 VDIWSVGCIMGEMIKG 223
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
+HRDL+++N+L++ E + DFG+ K L D + APE K +
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 213
Query: 92 EKCDVYSFGVLALEVI----KGKH-PRDFLXXXXXXXLNTDI--ELDEML--DPRLPAPS 142
DV+SFGV+ E+ K K P +F+ I L E+L + RLP P
Sbjct: 214 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 273
Query: 143 RSVQEKLISIVKVAFSCLNESPESRPTMK 171
E I + C N + RP+ +
Sbjct: 274 GCPDE----IYMIMTECWNNNVNQRPSFR 298
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 88
+HRDL+++N+L+ +ADFG+A+ D +N + T ++APE +
Sbjct: 166 IHRDLTARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 221
Query: 89 KITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP--RLPAPSRSV 145
T + DV+SFGVL E+ G P + EL ++L R+ P+
Sbjct: 222 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---------ELFKLLKEGHRMDKPANCT 272
Query: 146 QEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E + + C + P RPT K + + L
Sbjct: 273 NE----LYMMMRDCWHAVPSQRPTFKQLVEDL 300
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
+HRDL+++N+L++ E + DFG+ K L D + APE K +
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 92 EKCDVYSFGVLALEVI----KGKH-PRDFLXXXXXXXLNTDI--ELDEML--DPRLPAPS 142
DV+SFGV+ E+ K K P +F+ I L E+L + RLP P
Sbjct: 199 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 258
Query: 143 RSVQEKLISIVKVAFSCLNESPESRPTMK 171
E I + C N + RP+ +
Sbjct: 259 GCPDE----IYMIMTECWNNNVNQRPSFR 283
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
+HRDL+++N+L++ E + DFG+ K L D + APE K +
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 213
Query: 92 EKCDVYSFGVLALEVI----KGKH-PRDFLXXXXXXXLNTDI--ELDEML--DPRLPAPS 142
DV+SFGV+ E+ K K P +F+ I L E+L + RLP P
Sbjct: 214 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 273
Query: 143 RSVQEKLISIVKVAFSCLNESPESRPTMK 171
E I + C N + RP+ +
Sbjct: 274 GCPDE----IYMIMTECWNNNVNQRPSFR 298
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
+HRDL+++N+L++ E + DFG+ K L D + APE K +
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 195
Query: 92 EKCDVYSFGVLALEVI----KGKH-PRDFLXXXXXXXLNTDI--ELDEML--DPRLPAPS 142
DV+SFGV+ E+ K K P +F+ I L E+L + RLP P
Sbjct: 196 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 255
Query: 143 RSVQEKLISIVKVAFSCLNESPESRPTMK 171
E I + C N + RP+ +
Sbjct: 256 GCPDE----IYMIMTECWNNNVNQRPSFR 280
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
+HRDL+++N+L++ E + DFG+ K L D + APE K +
Sbjct: 167 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 226
Query: 92 EKCDVYSFGVLALEVI----KGKH-PRDFLXXXXXXXLNTDI--ELDEML--DPRLPAPS 142
DV+SFGV+ E+ K K P +F+ I L E+L + RLP P
Sbjct: 227 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 286
Query: 143 RSVQEKLISIVKVAFSCLNESPESRPTMK 171
E I + C N + RP+ +
Sbjct: 287 GCPDE----IYMIMTECWNNNVNQRPSFR 311
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 143 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 196
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
+HRDL+++N+L++ E + DFG+ K L D + APE K +
Sbjct: 140 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 199
Query: 92 EKCDVYSFGVLALEVI----KGKH-PRDFLXXXXXXXLNTDI--ELDEML--DPRLPAPS 142
DV+SFGV+ E+ K K P +F+ I L E+L + RLP P
Sbjct: 200 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 259
Query: 143 RSVQEKLISIVKVAFSCLNESPESRPTMK 171
E I + C N + RP+ +
Sbjct: 260 GCPDE----IYMIMTECWNNNVNQRPSFR 284
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 143 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 196
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 136 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 189
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 130 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 183
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 184 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG AK L + +
Sbjct: 124 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 180
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 181 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 237
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 238 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 271
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 137 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 190
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
+HRDL+++N+L++ E + DFG+ K L D + APE K +
Sbjct: 134 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 193
Query: 92 EKCDVYSFGVLALEVI----KGKH-PRDFLXXXXXXXLNTDI--ELDEML--DPRLPAPS 142
DV+SFGV+ E+ K K P +F+ I L E+L + RLP P
Sbjct: 194 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 253
Query: 143 RSVQEKLISIVKVAFSCLNESPESRPTMK 171
E I + C N + RP+ +
Sbjct: 254 GCPDE----IYMIMTECWNNNVNQRPSFR 278
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
+HRDL+++N+L++ E + DFG+ K L D + APE K +
Sbjct: 143 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 202
Query: 92 EKCDVYSFGVLALEVI----KGKH-PRDFLXXXXXXXLNTDI--ELDEML--DPRLPAPS 142
DV+SFGV+ E+ K K P +F+ I L E+L + RLP P
Sbjct: 203 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 262
Query: 143 RSVQEKLISIVKVAFSCLNESPESRPTMK 171
E I + C N + RP+ +
Sbjct: 263 GCPDE----IYMIMTECWNNNVNQRPSFR 287
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 143 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 196
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
++ AL+YL F VHRD++++N+L+ + DFG++++++ DS+ + G
Sbjct: 120 LSTALAYLESKRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLP 175
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T DV+ FGV E++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
+HRDL+++N+L++ E + DFG+ K L D + APE K +
Sbjct: 142 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 201
Query: 92 EKCDVYSFGVLALEVI----KGKH-PRDFLXXXXXXXLNTDI--ELDEML--DPRLPAPS 142
DV+SFGV+ E+ K K P +F+ I L E+L + RLP P
Sbjct: 202 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 261
Query: 143 RSVQEKLISIVKVAFSCLNESPESRPTMK 171
E I + C N + RP+ +
Sbjct: 262 GCPDE----IYMIMTECWNNNVNQRPSFR 286
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG AK L + +
Sbjct: 122 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 235
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 236 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 269
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG AK L + +
Sbjct: 127 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 183
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 240
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 241 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 274
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
+HRDL+++N+L++ E + DFG+ K L D + APE K +
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 92 EKCDVYSFGVLALEVI----KGKH-PRDFLXXXXXXXLNTDI--ELDEML--DPRLPAPS 142
DV+SFGV+ E+ K K P +F+ I L E+L + RLP P
Sbjct: 199 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 258
Query: 143 RSVQEKLISIVKVAFSCLNESPESRPTMK 171
E I + C N + RP+ +
Sbjct: 259 GCPDE----IYMIMTECWNNNVNQRPSFR 283
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
++ AL+YL F VHRD++++N+L+ + DFG++++++ DS+ + G
Sbjct: 120 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 175
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T DV+ FGV E++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 142 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 195
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG AK L + +
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 176
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 233
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 234 KGE----RLPQPPICT----IDVYMIMVKCWMIDADSRPKFR 267
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 141 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 194
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 195 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 154 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 207
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 133 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 186
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
+HRDL+++N+L++ E + DFG+ K L D + APE K +
Sbjct: 141 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 200
Query: 92 EKCDVYSFGVLALEVI----KGKH-PRDFLXXXXXXXLNTDI--ELDEML--DPRLPAPS 142
DV+SFGV+ E+ K K P +F+ I L E+L + RLP P
Sbjct: 201 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 260
Query: 143 RSVQEKLISIVKVAFSCLNESPESRPTMK 171
E I + C N + RP+ +
Sbjct: 261 GCPDE----IYMIMTECWNNNVNQRPSFR 285
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
+HRDL+++N+L++ E + DFG+ K L D + APE K +
Sbjct: 135 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 194
Query: 92 EKCDVYSFGVLALEVI----KGKH-PRDFLXXXXXXXLNTDI--ELDEML--DPRLPAPS 142
DV+SFGV+ E+ K K P +F+ I L E+L + RLP P
Sbjct: 195 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 254
Query: 143 RSVQEKLISIVKVAFSCLNESPESRPTMK 171
E I + C N + RP+ +
Sbjct: 255 GCPDE----IYMIMTECWNNNVNQRPSFR 279
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 138 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 191
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 88
+HRDL+++N+L+ +ADFG+A+ D +N + T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 89 KITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP--RLPAPSRSV 145
T + DV+SFGVL E+ G P + EL ++L R+ P+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---------ELFKLLKEGHRMDKPANCT 285
Query: 146 QEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E + + C + P RPT K + + L
Sbjct: 286 NE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 128 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 181
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 5 QELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK 64
+++ Q++ + + YL + VHRDL+++N+L++ E++ + DFG+ K ++
Sbjct: 121 NKINLKQQLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVESEHQVKIGDFGLTKAIE 177
Query: 65 PDSSNWT---EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVI 107
D T + + APE K DV+SFGV E++
Sbjct: 178 TDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
++ AL+YL F VHRD++++N+L+ + DFG++++++ DS+ + G
Sbjct: 120 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 175
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T DV+ FGV E++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
++ AL+YL F VHRD++++N+L+ + DFG++++++ DS+ + G
Sbjct: 122 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 177
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T DV+ FGV E++
Sbjct: 178 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDL-EYEAHVADFGIAKFLKPDSSNWTEFAG 75
+ + L +LH PPI+HRDL N+ + + D G+A + +S G
Sbjct: 136 RQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR--ASFAKAVIG 192
Query: 76 TYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T + APE Y K E DVY+FG LE ++P
Sbjct: 193 TPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 128 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 181
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
+HRDL+++N+L++ E + DFG+ K L D + APE K +
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 195
Query: 92 EKCDVYSFGVLALEVI----KGKH-PRDFLXXXXXXXLNTDI--ELDEML--DPRLPAPS 142
DV+SFGV+ E+ K K P +F+ I L E+L + RLP P
Sbjct: 196 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 255
Query: 143 RSVQEKLISIVKVAFSCLNESPESRPTMK 171
E I + C N + RP+ +
Sbjct: 256 GCPDE----IYMIMTECWNNNVNQRPSFR 280
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 151 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 204
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 133 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 186
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 88
+HRDL+++N+L+ +ADFG+A+ D +N + T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 89 KITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP--RLPAPSRSV 145
T + DV+SFGVL E+ G P + EL ++L R+ P+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---------ELFKLLKEGHRMDKPANCT 285
Query: 146 QEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E + + C + P RPT K + + L
Sbjct: 286 NE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 136 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 189
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 133 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 186
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 151 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 204
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
++ AL+YL F VHRD++++N+L+ + DFG++++++ DS+ + G
Sbjct: 148 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 203
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T DV+ FGV E++
Sbjct: 204 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 150 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 203
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 88
+HRDL+++N+L+ +ADFG+A+ D +N + T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 89 KITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP--RLPAPSRSV 145
T + DV+SFGVL E+ G P + EL ++L R+ P+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---------ELFKLLKEGHRMDKPANCT 285
Query: 146 QEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E + + C + P RPT K + + L
Sbjct: 286 NE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 88
+HRDL+++N+L+ +ADFG+A+ D +N + T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 89 KITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP--RLPAPSRSV 145
T + DV+SFGVL E+ G P + EL ++L R+ P+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---------ELFKLLKEGHRMDKPANCT 285
Query: 146 QEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E + + C + P RPT K + + L
Sbjct: 286 NE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
++ AL+YL F VHRD++++N+L+ + DFG++++++ DS+ + G
Sbjct: 123 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 178
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T DV+ FGV E++
Sbjct: 179 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 5 QELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK 64
+++ Q++ + + YL + VHRDL+++N+L++ E++ + DFG+ K ++
Sbjct: 109 NKINLKQQLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVESEHQVKIGDFGLTKAIE 165
Query: 65 PDSSNWT---EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVI 107
D T + + APE K DV+SFGV E++
Sbjct: 166 TDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 127 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 180
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
++ AL+YL F VHRD++++N+L+ + DFG++++++ DS+ + G
Sbjct: 117 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 172
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T DV+ FGV E++
Sbjct: 173 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 88
+HRDL+++N+L+ +ADFG+A+ D +N + T ++APE +
Sbjct: 171 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 226
Query: 89 KITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP--RLPAPSRSV 145
T + DV+SFGVL E+ G P + EL ++L R+ P+
Sbjct: 227 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---------ELFKLLKEGHRMDKPANCT 277
Query: 146 QEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E + + C + P RPT K + + L
Sbjct: 278 NE----LYMMMRDCWHAVPSQRPTFKQLVEDL 305
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEY---EAHVADFGIAKFLKPDSSNWTE 72
IK + + + YLH + IVH DL +N+LL Y + + DFG+++ + + E
Sbjct: 137 IKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG-HACELRE 192
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT Y+APE+ IT D+++ G++A ++ P
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 129 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 182
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 88
+HRDL+++N+L+ +ADFG+A+ D +N + T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 89 KITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP--RLPAPSRSV 145
T + DV+SFGVL E+ G P + EL ++L R+ P+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---------ELFKLLKEGHRMDKPANCT 285
Query: 146 QEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E + + C + P RPT K + + L
Sbjct: 286 NE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
++ AL+YL F VHRD++++N+L+ + DFG++++++ DS+ + G
Sbjct: 125 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 180
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T DV+ FGV E++
Sbjct: 181 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 137 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 190
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 88
+HRDL+++N+L+ +ADFG+A+ D +N + T ++APE +
Sbjct: 168 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 223
Query: 89 KITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP--RLPAPSRSV 145
T + DV+SFGVL E+ G P + EL ++L R+ P+
Sbjct: 224 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---------ELFKLLKEGHRMDKPANCT 274
Query: 146 QEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E + + C + P RPT K + + L
Sbjct: 275 NE----LYMMMRDCWHAVPSQRPTFKQLVEDL 302
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT Y+A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
P + + + D ++ GVL E+ G P
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 88
+HRDL+++N+L+ +ADFG+A+ D +N + T ++APE +
Sbjct: 225 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDR 280
Query: 89 KITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP--RLPAPSRSV 145
T + DV+SFGVL E+ G P + EL ++L R+ P+
Sbjct: 281 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---------ELFKLLKEGHRMDKPANCT 331
Query: 146 QEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E + + C + P RPT K + + L
Sbjct: 332 NE----LYMMMRDCWHAVPSQRPTFKQLVEDL 359
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK-FLKPDSSNWTEFAGTYGYV 80
AL +LH I++RD+ +N+LLD + DFG++K F+ ++ +F GT Y+
Sbjct: 171 ALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYM 227
Query: 81 APELAYTMKIT--EKCDVYSFGVLALEVIKGKHP 112
AP++ + D +S GVL E++ G P
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPEL----AYTMK 89
I+HRD+ N+LLD + DFGI+ L DS T AG Y+APE A
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDAGCRPYMAPERIDPSASRQG 205
Query: 90 ITEKCDVYSFGVLALEVIKGKHP 112
+ DV+S G+ E+ G+ P
Sbjct: 206 YDVRSDVWSLGITLYELATGRFP 228
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
++ AL+YL F VHRD++++N+L+ + DFG++++++ DS+ + G
Sbjct: 500 LSTALAYLESKRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLP 555
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T DV+ FGV E++
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 150 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 203
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 127 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 180
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 137 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA 190
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ A+ Y H IVHRDL +NLLLD +ADFG++ + D + G+
Sbjct: 112 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPN 167
Query: 79 YVAPE-LAYTMKITEKCDVYSFGVLALEVIKGKHPRD 114
Y APE ++ + + DV+S GV+ ++ + P D
Sbjct: 168 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
++ AL+YL F VHRD++++N+L+ + DFG++++++ DS+ + G
Sbjct: 500 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 555
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T DV+ FGV E++
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 16/149 (10%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
+HR+L+++N+L++ E + DFG+ K L D + + APE K +
Sbjct: 137 IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFS 196
Query: 92 EKCDVYSFGVLALEVI----KGKH-PRDFLXXXXXXXLNTDI--ELDEML--DPRLPAPS 142
DV+SFGV+ E+ K K P +F+ I L E+L + RLP P
Sbjct: 197 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 256
Query: 143 RSVQEKLISIVKVAFSCLNESPESRPTMK 171
E I + C N + RP+ +
Sbjct: 257 GCPDE----IYMIMTECWNNNVNQRPSFR 281
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHV---ADF 57
D A E + S+ M K + +A+ YLH I HRD+ +NLL + + DF
Sbjct: 109 DQAFTEREASEIM---KSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 162
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G AK +S TE T YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 163 GFAKETTSHNS-LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Query: 6 ELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKP 65
EL SQ ++ + +A + YL F VHRDL+++N L+ + DFG+++ +
Sbjct: 124 ELTQSQMLHIAQQIAAGMVYLASQHF---VHRDLATRNCLVGENLLVKIGDFGMSRDVY- 179
Query: 66 DSSNWTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
S+++ G ++ PE K T + DV+S GV+ E+ GK P
Sbjct: 180 -STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 127 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGYVA 180
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEY----EAHVADFGIAKFLKPDSSNWTEFA 74
+ + YLH +VHRDL N+L E + DFG AK L+ ++
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC 181
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T +VAPE+ CD++S GVL ++ G P
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 13 MNTIKGVADALSYL--HHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNW 70
++ + +A + YL HH +VH+DL+++N+L+ + ++D G+ F + ++++
Sbjct: 131 VHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADY 183
Query: 71 TEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLN 125
+ G ++APE K + D++S+GV+ EV G P N
Sbjct: 184 YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP-------YCGYSN 236
Query: 126 TDIELDEMLDPR--LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
D+ EM+ R LP P + + + C NE P RP K + +LR
Sbjct: 237 QDVV--EMIRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ A+ Y H IVHRDL +NLLLD +ADFG++ + D + G+
Sbjct: 121 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPN 176
Query: 79 YVAPE-LAYTMKITEKCDVYSFGVLALEVIKGKHPRD 114
Y APE ++ + + DV+S GV+ ++ + P D
Sbjct: 177 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ A+ Y H IVHRDL +NLLLD +ADFG++ + D + G+
Sbjct: 116 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPN 171
Query: 79 YVAPE-LAYTMKITEKCDVYSFGVLALEVIKGKHPRD 114
Y APE ++ + + DV+S GV+ ++ + P D
Sbjct: 172 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ A+ Y H IVHRDL +NLLLD +ADFG++ + D + G+
Sbjct: 122 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPN 177
Query: 79 YVAPE-LAYTMKITEKCDVYSFGVLALEVIKGKHPRD 114
Y APE ++ + + DV+S GV+ ++ + P D
Sbjct: 178 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 27/167 (16%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA-KFLKPDSSNWTEFAGT- 76
+A + YL + F +HRDL+++N +L + VADFG++ K D A
Sbjct: 156 IALGMEYLSNRNF---LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEV-IKGKHPRDFLXXXXXXXLNTDIELDEMLD 135
++A E T K DV++FGV E+ +G P ++ EM D
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY------------PGVQNHEMYD 260
Query: 136 -----PRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
RL P + E + ++ +SC P RPT ++ QL
Sbjct: 261 YLLHGHRLKQPEDCLDE----LYEIMYSCWRTDPLDRPTFSVLRLQL 303
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG AK L + +
Sbjct: 122 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 235
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 236 KGE----RLPQPPICT----IDVYMIMRKCWMIDADSRPKFR 269
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 29/175 (16%)
Query: 13 MNTIKGVADALSYL--HHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNW 70
++ + +A + YL HH +VH+DL+++N+L+ + ++D G+ F + ++++
Sbjct: 148 VHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADY 200
Query: 71 TEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLN 125
+ G ++APE K + D++S+GV+ EV G P N
Sbjct: 201 YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP-------YCGYSN 253
Query: 126 TDIELDEMLDPR--LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
D+ EM+ R LP P + + + C NE P RP K + +LR
Sbjct: 254 QDVV--EMIRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 17/162 (10%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+N +A ++YL +VHRDL+++N+L+ + DFG AK L + +
Sbjct: 122 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 73 FAGTY--GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIE 129
G ++A E T + DV+S+GV E++ G P D + +++ +E
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI---PASEISSILE 235
Query: 130 LDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
E RLP P I + + C +SRP +
Sbjct: 236 KGE----RLPQPPICT----IDVYMIMRKCWMIDADSRPKFR 269
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHV---ADF 57
D A E + S+ M K + +A+ YLH I HRD+ +NLL + + DF
Sbjct: 116 DQAFTEREASEIM---KSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 169
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G AK +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 170 GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 23/122 (18%)
Query: 8 DWSQRMNTIKGVADALSYLHHDC------FPPIVHRDLSSKNLLLDLEYEAHVADFGIA- 60
DW V L+YLH + P I HRDL+S+N+L+ + ++DFG++
Sbjct: 109 DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM 168
Query: 61 -----KFLKP---DSSNWTEFAGTYGYVAPEL---AYTMKITE----KCDVYSFGVLALE 105
+ ++P D++ +E GT Y+APE+ A ++ E + D+Y+ G++ E
Sbjct: 169 RLTGNRLVRPGEEDNAAISE-VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWE 227
Query: 106 VI 107
+
Sbjct: 228 IF 229
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 19 VADALSYL-HHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT- 76
VA +++L +C +HRD++++N+LL + A + DFG+A+ + DS+ +
Sbjct: 167 VAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 222
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T + DV+S+G+L E+
Sbjct: 223 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 254
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHV---ADF 57
D A E + S+ M K + +A+ YLH I HRD+ +NLL + + DF
Sbjct: 115 DQAFTEREASEIM---KSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 168
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G AK +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 169 GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 19 VADALSYL-HHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT- 76
VA +++L +C +HRD++++N+LL + A + DFG+A+ + DS+ +
Sbjct: 173 VAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T + DV+S+G+L E+
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHV---ADF 57
D A E + S+ M K + +A+ YLH I HRD+ +NLL + + DF
Sbjct: 117 DQAFTEREASEIM---KSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 170
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G AK +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 171 GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 19 VADALSYL-HHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY 77
VA +++L +C +HRD++++N+LL + A + DFG+A+ + DS+ +
Sbjct: 161 VAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 78 --GYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T + DV+S+G+L E+
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 248
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT---EFAGTYGYVAPELAYTMKIT 91
VHRDL+++N+L++ E +ADFG+AK L D + APE +
Sbjct: 133 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFS 192
Query: 92 EKCDVYSFGVLALEVI----KGKHPR-DFLXXXXXXXLNTDI------ELDEMLDPRLPA 140
+ DV+SFGV+ E+ K P +FL D+ RLPA
Sbjct: 193 RQSDVWSFGVVLYELFTYCDKSCSPSAEFL---RMMGCERDVPALCRLLELLEEGQRLPA 249
Query: 141 PSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
P + ++ ++K+ C SP+ RP+ + QL
Sbjct: 250 PP-ACPAEVHELMKL---CWAPSPQDRPSFSALGPQL 282
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL +LH ++HRD+ N+L++ + DFGI+ +L D + + AG
Sbjct: 145 IVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID-AGCKP 201
Query: 79 YVAPEL--------AYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIEL 130
Y APE Y++ K D++S G+ +E+ + P D ++
Sbjct: 202 YXAPERINPELNQKGYSV----KSDIWSLGITXIELAILRFPYD----SWGTPFQQLKQV 253
Query: 131 DEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
E P+LPA S + V CL ++ + RPT
Sbjct: 254 VEEPSPQLPADKFSAE-----FVDFTSQCLKKNSKERPT 287
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 19 VADALSYL-HHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT- 76
VA +++L +C +HRD++++N+LL + A + DFG+A+ + DS+ +
Sbjct: 169 VAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T + DV+S+G+L E+
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 256
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 19 VADALSYL-HHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT- 76
VA +++L +C +HRD++++N+LL + A + DFG+A+ + DS+ +
Sbjct: 173 VAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T + DV+S+G+L E+
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 19 VADALSYL-HHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY 77
VA + YL C +HRDL+++N+L+ + +ADFG+A+ + G
Sbjct: 159 VARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRL 214
Query: 78 --GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEML 134
++APE + T + DV+SFGVL E+ G P + EL ++L
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---------ELFKLL 265
Query: 135 DP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
R+ PS E + + C + P RPT K + + L
Sbjct: 266 KEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 19 VADALSYL-HHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT- 76
VA +++L +C +HRD++++N+LL + A + DFG+A+ + DS+ +
Sbjct: 175 VAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T + DV+S+G+L E+
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 262
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHV---ADF 57
D A E + S+ M K + +A+ YLH I HRD+ +NLL + + DF
Sbjct: 155 DQAFTEREASEIM---KSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 208
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G AK +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 209 GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ E Y Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY-YRAPEVILGMGYKEN 205
Query: 94 CDVYSFGVLALEVIKG 109
D++S G + E+IKG
Sbjct: 206 VDIWSVGCIMGEMIKG 221
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHV---ADF 57
D A E + S+ M K + +A+ YLH I HRD+ +NLL + + DF
Sbjct: 109 DQAFTEREASEIM---KSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 162
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G AK +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 163 GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L YLH I+HRDL NLLLD +ADFG+AK + + T Y A
Sbjct: 124 GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRA 180
Query: 82 PELAYTMKITE-KCDVYSFGVLALEVI 107
PEL + ++ D+++ G + E++
Sbjct: 181 PELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 19/107 (17%)
Query: 19 VADALSYLHHDCF-----PPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT-- 71
A L++LH + P I HRDL SKN+L+ +AD G+A ++ DS+ T
Sbjct: 109 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTID 166
Query: 72 ----EFAGTYGYVAPEL---AYTMKITE---KCDVYSFGVLALEVIK 108
GT Y+APE+ + MK E + D+Y+ G++ E+ +
Sbjct: 167 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 24/121 (19%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLL--------DLEYEAH-----VADFGI 59
++ ++ +A +++LH I+HRDL +N+L+ D + A ++DFG+
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 60 AKFLKPDS----SNWTEFAGTYGYVAPEL---AYTMKITEKCDVYSFGVLALEVI-KGKH 111
K L N +GT G+ APEL + ++T D++S G + ++ KGKH
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 112 P 112
P
Sbjct: 253 P 253
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHV---ADF 57
D A E + S+ M K + +A+ YLH I HRD+ +NLL + + DF
Sbjct: 110 DQAFTEREASEIM---KSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 163
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G AK +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 164 GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
++ AL+YL F VHRD++++N+L+ + DFG++++++ DS+ G
Sbjct: 120 LSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLP 175
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEVI 107
++APE + T DV+ FGV E++
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 19/107 (17%)
Query: 19 VADALSYLHHDCF-----PPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT-- 71
A L++LH + P I HRDL SKN+L+ +AD G+A ++ DS+ T
Sbjct: 135 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTID 192
Query: 72 ----EFAGTYGYVAPEL---AYTMKITE---KCDVYSFGVLALEVIK 108
GT Y+APE+ + MK E + D+Y+ G++ E+ +
Sbjct: 193 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 239
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHV---ADF 57
D A E + S+ M K + +A+ YLH I HRD+ +NLL + + DF
Sbjct: 125 DQAFTEREASEIM---KSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 178
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G AK +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 179 GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 24/121 (19%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLL--------DLEYEAH-----VADFGI 59
++ ++ +A +++LH I+HRDL +N+L+ D + A ++DFG+
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 60 AKFLKPDS----SNWTEFAGTYGYVAPEL---AYTMKITEKCDVYSFGVLALEVI-KGKH 111
K L N +GT G+ APEL + ++T D++S G + ++ KGKH
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 112 P 112
P
Sbjct: 253 P 253
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHV---ADF 57
D A E + S+ M K + +A+ YLH I HRD+ +NLL + + DF
Sbjct: 161 DQAFTEREASEIM---KSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDF 214
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G AK +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 215 GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 19/107 (17%)
Query: 19 VADALSYLHHDCF-----PPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT-- 71
A L++LH + P I HRDL SKN+L+ +AD G+A ++ DS+ T
Sbjct: 115 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTID 172
Query: 72 ----EFAGTYGYVAPEL---AYTMKITE---KCDVYSFGVLALEVIK 108
GT Y+APE+ + MK E + D+Y+ G++ E+ +
Sbjct: 173 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 219
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 19/107 (17%)
Query: 19 VADALSYLHHDCF-----PPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT-- 71
A L++LH + P I HRDL SKN+L+ +AD G+A ++ DS+ T
Sbjct: 112 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTID 169
Query: 72 ----EFAGTYGYVAPEL---AYTMKITE---KCDVYSFGVLALEVIK 108
GT Y+APE+ + MK E + D+Y+ G++ E+ +
Sbjct: 170 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 216
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ + F VHRDL+++N ++ ++ + DFG+ + + G
Sbjct: 132 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 188
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
+++PE T DV+SFGV+ E+
Sbjct: 189 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 174 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 229
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEY----EAHVADFGIAKFLKPDSSNWTEFA 74
+ + YLH +VHRDL N+L E + DFG AK L+ ++
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 75 GTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T +VAPE+ CD++S GVL + G P
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 19/107 (17%)
Query: 19 VADALSYLHHDCF-----PPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT-- 71
A L++LH + P I HRDL SKN+L+ +AD G+A ++ DS+ T
Sbjct: 148 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTID 205
Query: 72 ----EFAGTYGYVAPEL---AYTMKITE---KCDVYSFGVLALEVIK 108
GT Y+APE+ + MK E + D+Y+ G++ E+ +
Sbjct: 206 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHV---ADF 57
D A E + S+ M K + +A+ YLH I HRD+ +NLL + + DF
Sbjct: 111 DQAFTEREASEIM---KSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G AK +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 165 GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L Y+H +VHRDL NL ++ + E + DFG+A+ + T + T Y A
Sbjct: 156 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA---DAEMTGYVVTRWYRA 209
Query: 82 PELAYT-MKITEKCDVYSFGVLALEVIKGK 110
PE+ + M + D++S G + E++ GK
Sbjct: 210 PEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA---- 74
+A+A+ +LH ++HRDL N+ ++ V DFG+ + D T
Sbjct: 173 IAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 75 --------GTYGYVAPELAYTMKITEKCDVYSFGVLALEVI 107
GT Y++PE + + K D++S G++ E++
Sbjct: 230 YATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 19/107 (17%)
Query: 19 VADALSYLHHDCF-----PPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT-- 71
A L++LH + P I HRDL SKN+L+ +AD G+A ++ DS+ T
Sbjct: 110 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTID 167
Query: 72 ----EFAGTYGYVAPEL---AYTMKITE---KCDVYSFGVLALEVIK 108
GT Y+APE+ + MK E + D+Y+ G++ E+ +
Sbjct: 168 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 214
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS----------SNWTEFAGTYGYVAPE 83
++HRDL NLL++ + V DFG+A+ + + S TE+ T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 84 LAYT-MKITEKCDVYSFGVLALEV 106
+ T K + DV+S G + E+
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L Y+H +VHRDL NL ++ + E + DFG+A+ + T + T Y A
Sbjct: 138 GLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHA---DAEMTGYVVTRWYRA 191
Query: 82 PELAYT-MKITEKCDVYSFGVLALEVIKGK 110
PE+ + M + D++S G + E++ GK
Sbjct: 192 PEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHV---ADF 57
D A E + S+ M K + +A+ YLH I HRD+ +NLL + + DF
Sbjct: 111 DQAFTEREASEIM---KSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G AK +S T Y YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 165 GFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + D+G+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 132 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 187
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT--YGYVAPELAYTMKIT 91
+VHRDL+++N+L+ + ++DFG+++ + + S G ++A E + T
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 92 EKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLI 150
+ DV+SFGVL E++ G +P + L R+ P +E
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT-------GHRMERPDNCSEE--- 280
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ ++ C + P+ RP +S+ L
Sbjct: 281 -MYRLMLQCWKQEPDKRPVFADISKDL 306
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 131 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 186
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 214
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 215
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 130 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 185
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDIP 212
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 132 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 187
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L +LH +C IVHRDL +N+L+ +ADFG+A+ + T T Y A
Sbjct: 132 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LTPVVVTLWYRA 187
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGK 110
PE+ D++S G + E+ + K
Sbjct: 188 PEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 214
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 174 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 229
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 131 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 186
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ + F VHRDL+++N ++ ++ + DFG+ + + G
Sbjct: 141 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 197
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
+++PE T DV+SFGV+ E+
Sbjct: 198 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT--YGYVAPELAYTMKIT 91
+VHRDL+++N+L+ + ++DFG+++ + + S G ++A E + T
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 92 EKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLI 150
+ DV+SFGVL E++ G +P + L R+ P +E
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT-------GHRMERPDNCSEE--- 280
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ ++ C + P+ RP +S+ L
Sbjct: 281 -MYRLMLQCWKQEPDKRPVFADISKDL 306
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 215
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
YLH +++RDL +NLL+D + V DFG AK +K W GT +A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEALA 206
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
PE+ + + D ++ GVL E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 132 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 187
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 215
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 174 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 229
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ + +
Sbjct: 154 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---YVA 207
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 127 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 182
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 146 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 201
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 147 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 202
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 179 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 234
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 166 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 221
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 147 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 202
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ +T T Y APE+ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYST 183
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 214
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ +T T Y APE+ K +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYST 190
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 191 AVDIWSLGCIFAEMV 205
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 31/169 (18%)
Query: 19 VADALSYL-HHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK------FLKPDSSNWT 71
VA + YL C +HRDL+++N+L+ + +ADFG+A+ + K ++
Sbjct: 200 VARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 255
Query: 72 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIEL 130
++APE + T + DV+SFGVL E+ G P + EL
Sbjct: 256 PVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---------EL 302
Query: 131 DEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
++L R+ PS E + + C + P RPT K + + L
Sbjct: 303 FKLLKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 347
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 160 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 215
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+ + + T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM---TGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 146 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 201
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 159 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 214
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 26/152 (17%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 88
+HRDL+++N+L+ +ADFG+A+ D +N T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKKTTNGRLPVKWMAPEALFDR 234
Query: 89 KITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP--RLPAPSRSV 145
T + DV+SFGVL E+ G P + EL ++L R+ P+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---------ELFKLLKEGHRMDKPANCT 285
Query: 146 QEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E + + C + P RPT K + + L
Sbjct: 286 NE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 26/152 (17%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG------YVAPELAYTM 88
+HRDL+++N+L+ +ADFG+A+ D +N T ++APE +
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKKTTNGRLPVKWMAPEALFDR 234
Query: 89 KITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDP--RLPAPSRSV 145
T + DV+SFGVL E+ G P + EL ++L R+ P+
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---------ELFKLLKEGHRMDKPANCT 285
Query: 146 QEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
E + + C + P RPT K + + L
Sbjct: 286 NE----LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 147 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 202
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + DFG AK L N + Y Y
Sbjct: 153 SLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-YR 208
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T D++S G + E+++G+
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 154 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 209
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 28 HDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LA 85
H+C ++HRD+ +N+L+DL E + DFG LK + +T+F GT Y PE +
Sbjct: 127 HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIR 182
Query: 86 YTMKITEKCDVYSFGVLALEVIKGKHP 112
Y V+S G+L +++ G P
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
VA + +L F VHRDL+++N+L+ + DFG+A+ + D SN+
Sbjct: 181 VAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD-SNYVVRGNARL 236
Query: 77 -YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHP 112
++APE + T K DV+S+G+L E+ G +P
Sbjct: 237 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIA---KFLKPDSSNWTEFAGTYGYVAPE-LAYTMK 89
+V+RDL N+LLD ++D G+A KP +S GT+GY+APE L +
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 367
Query: 90 ITEKCDVYSFGVLALEVIKGKHP 112
D +S G + ++++G P
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSP 390
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA---- 74
+A+A+ +LH ++HRDL N+ ++ V DFG+ + D T
Sbjct: 127 IAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 75 --------GTYGYVAPELAYTMKITEKCDVYSFGVLALEVI 107
GT Y++PE + + K D++S G++ E++
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ +T T Y APE+ K +
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 187
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 188 AVDIWSLGCIFAEMV 202
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 21 DALSYLHHDCFPPIVHRDLSSKNLLLDLE-YEAHVADFGIAKFLKPDSSNWTEFAGTY-- 77
+ L YLH I+H D+ + N+LL + A + DFG A L+PD + G Y
Sbjct: 196 EGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP 252
Query: 78 ---GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APE+ K DV+S + L ++ G HP
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIA---KFLKPDSSNWTEFAGTYGYVAPE-LAYTMK 89
+V+RDL N+LLD ++D G+A KP +S GT+GY+APE L +
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 366
Query: 90 ITEKCDVYSFGVLALEVIKGKHP 112
D +S G + ++++G P
Sbjct: 367 YDSSADWFSLGCMLFKLLRGHSP 389
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ +T T Y APE+ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ +T T Y APE+ K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 183 AVDIWSLGCIFAEMV 197
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ +T T Y APE+ K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 183 AVDIWSLGCIFAEMV 197
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ F VHRDL+++N ++ ++ + DFG+ + + G
Sbjct: 136 IADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 192
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
++APE T D++SFGV+ E+
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 29/168 (17%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
VA + YL +HRDL+++N+L+ + +ADFG+A+ D + + T
Sbjct: 144 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 196
Query: 79 ------YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELD 131
++APE + T + DV+SFGVL E+ G P + EL
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---------ELF 247
Query: 132 EMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
++L R+ PS E + + C + P RPT K + + L
Sbjct: 248 KLLKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH---TDDEMTGXVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ F VHRDL+++N ++ ++ + DFG+ + + G
Sbjct: 139 IADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
++APE T D++SFGV+ E+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 28/125 (22%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLL--------DLEYEAH-----VADFGI 59
++ ++ +A +++LH I+HRDL +N+L+ D + A ++DFG+
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 60 AKFLKPDSS----NWTEFAGTYGYVAPE-------LAYTMKITEKCDVYSFGVLALEVI- 107
K L S N +GT G+ APE L ++T D++S G + ++
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 108 KGKHP 112
KGKHP
Sbjct: 235 KGKHP 239
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT--YGYVAPELAYTMKIT 91
+VHRDL+++N+L+ + ++DFG+++ + + S G ++A E + T
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYT 230
Query: 92 EKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLI 150
+ DV+SFGVL E++ G +P + L R+ P +E
Sbjct: 231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT-------GHRMERPDNCSEE--- 280
Query: 151 SIVKVAFSCLNESPESRPTMKIVSQQL 177
+ ++ C + P+ RP +S+ L
Sbjct: 281 -MYRLMLQCWKQEPDKRPVFADISKDL 306
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS----------SNWTEFAGTYGYVAPE 83
++HRDL NLL++ + V DFG+A+ + + S EF T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 84 LAYT-MKITEKCDVYSFGVLALEV 106
+ T K + DV+S G + E+
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
VA + YL +HRDL+++N+L+ + +ADFG+A+ + G
Sbjct: 159 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLD 135
++APE + T + DV+SFGVL E+ G P + EL ++L
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---------ELFKLLK 266
Query: 136 P--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
R+ PS E + + C + P RPT K + + L
Sbjct: 267 EGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ +T T Y APE+ K +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 184
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 185 AVDIWSLGCIFAEMV 199
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ +T T Y APE+ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ +T T Y APE+ K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 183 AVDIWSLGCIFAEMV 197
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ +T T Y APE+ K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 183 AVDIWSLGCIFAEMV 197
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ +T T Y APE+ K +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 190
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 191 AVDIWSLGCIFAEMV 205
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ +T T Y APE+ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIA---KFLKPDSSNWTEFAGTYGYVAPE-LAYTMK 89
+V+RDL N+LLD ++D G+A KP +S GT+GY+APE L +
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 367
Query: 90 ITEKCDVYSFGVLALEVIKGKHP 112
D +S G + ++++G P
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIA---KFLKPDSSNWTEFAGTYGYVAPE-LAYTMK 89
+V+RDL N+LLD ++D G+A KP +S GT+GY+APE L +
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 367
Query: 90 ITEKCDVYSFGVLALEVIKGKHP 112
D +S G + ++++G P
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ F VHRDL+++N ++ ++ + DFG+ + + G
Sbjct: 139 IADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
++APE T D++SFGV+ E+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ +T T Y APE+ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 29/168 (17%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
VA + YL +HRDL+++N+L+ + +ADFG+A+ D + + T
Sbjct: 159 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 211
Query: 79 ------YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELD 131
++APE + T + DV+SFGVL E+ G P + EL
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---------ELF 262
Query: 132 EMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
++L R+ PS E + + C + P RPT K + + L
Sbjct: 263 KLLKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
VA + YL +HRDL+++N+L+ + +ADFG+A+ + G
Sbjct: 152 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 208
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLD 135
++APE + T + DV+SFGVL E+ G P + EL ++L
Sbjct: 209 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---------ELFKLLK 259
Query: 136 P--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
R+ PS E + + C + P RPT K + + L
Sbjct: 260 EGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 299
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
VA + YL +HRDL+++N+L+ + +ADFG+A+ + G
Sbjct: 148 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 204
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLD 135
++APE + T + DV+SFGVL E+ G P + EL ++L
Sbjct: 205 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---------ELFKLLK 255
Query: 136 P--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
R+ PS E + + C + P RPT K + + L
Sbjct: 256 EGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 295
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ T +
Sbjct: 160 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVA 213
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M D++S G + E++ G+
Sbjct: 214 TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
VA + YL +HRDL+++N+L+ + +ADFG+A+ + G
Sbjct: 151 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 207
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELDEMLD 135
++APE + T + DV+SFGVL E+ G P + EL ++L
Sbjct: 208 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---------ELFKLLK 258
Query: 136 P--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
R+ PS E + + C + P RPT K + + L
Sbjct: 259 EGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 298
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 29/168 (17%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
VA + YL +HRDL+++N+L+ + +ADFG+A+ D + + T
Sbjct: 159 VARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTN 211
Query: 79 ------YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXLNTDIELD 131
++APE + T + DV+SFGVL E+ G P + EL
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---------ELF 262
Query: 132 EMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
++L R+ PS E + + C + P RPT K + + L
Sbjct: 263 KLLKEGHRMDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 7 LDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK----- 61
L ++++ + VA ++YL F VHRDL+++N L+ +ADFG+++
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 62 -FLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVI 107
+ K D ++ A ++ PE + + T + DV+++GV+ E+
Sbjct: 228 DYYKADGND----AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 6 ELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKP 65
ELD + + + + +LH I+HRDL N+++ + + DFG+A+
Sbjct: 115 ELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAG 170
Query: 66 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGK 110
S T + T Y APE+ M E D++S G + E+++ K
Sbjct: 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 6 ELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKP 65
ELD + + + + +LH I+HRDL N+++ + + DFG+A+
Sbjct: 122 ELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAG 177
Query: 66 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGK 110
S T + T Y APE+ M E D++S G + E+++ K
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYG 78
+ AL YL ++HRD+ N+LLD + + DFGI+ L D + AG
Sbjct: 133 IVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK-DRSAGCAA 189
Query: 79 YVAPELAYTMKITE-----KCDVYSFGVLALEVIKGKHP 112
Y+APE T+ + DV+S G+ +E+ G+ P
Sbjct: 190 YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 6 ELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKP 65
ELD + + + + +LH I+HRDL N+++ + + DFG+A+
Sbjct: 122 ELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAG 177
Query: 66 DSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGK 110
S T + T Y APE+ M E D++S G + E+++ K
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 20/173 (11%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA 60
++ A L Q ++ VA + YL F +HRDL+++N+L+ Y A +ADFG++
Sbjct: 123 NSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLS 179
Query: 61 KFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXX 119
+ + L Y++ T DV+S+GVL E++ G P +
Sbjct: 180 RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIVSLGGTPYCGM--- 235
Query: 120 XXXXLNTDIELDEML--DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
T EL E L RL P E + + C E P RP+
Sbjct: 236 ------TCAELYEKLPQGYRLEKPLNCDDE----VYDLMRQCWREKPYERPSF 278
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 25/111 (22%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK--------------FLKPDS 67
+ YLH ++HRD+ N+LL+ E VADFG+++ + ++
Sbjct: 121 VIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 68 SNW-------TEFAGTYGYVAPE-LAYTMKITEKCDVYSFGVLALEVIKGK 110
N+ T++ T Y APE L + K T+ D++S G + E++ GK
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTE 72
+ + A + YL C +HRDL+++N L+ + ++DFG+++ E
Sbjct: 216 LQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR---------EE 263
Query: 73 FAGTYG-----------YVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXX 120
G Y + APE + + + DV+SFG+L E G P L
Sbjct: 264 ADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL---- 319
Query: 121 XXXLNTDIELDEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
++ + E ++ RLP P ++ ++ C P RP+ + Q+L+
Sbjct: 320 -----SNQQTREFVEKGGRLPCPELCPD----AVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 94 CDVYSFGVLALEVIKGK 110
D++S G + E+++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 20/173 (11%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA 60
++ A L Q ++ VA + YL F +HRDL+++N+L+ Y A +ADFG++
Sbjct: 133 NSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLS 189
Query: 61 KFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXX 119
+ + L Y++ T DV+S+GVL E++ G P +
Sbjct: 190 RGQEVYVKKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGM--- 245
Query: 120 XXXXLNTDIELDEML--DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTM 170
T EL E L RL P E + + C E P RP+
Sbjct: 246 ------TCAELYEKLPQGYRLEKPLNCDDE----VYDLMRQCWREKPYERPSF 288
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 94 CDVYSFGVLALEVIKGK 110
D++S G + E+++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 94 CDVYSFGVLALEVIKGK 110
D++S G + E+++ K
Sbjct: 200 VDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 198
Query: 94 CDVYSFGVLALEVIKGK 110
D++S G + E+++ K
Sbjct: 199 VDIWSVGCIMGEMVRHK 215
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 94 CDVYSFGVLALEVIKGK 110
D++S G + E+++ K
Sbjct: 207 VDIWSVGCIMGEMVRHK 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYE---AHVADFGIAKFLKPDSSNWTEFAGTYG 78
A+ YLH + I+HRDL +N+LL + E + DFG +K L ++S GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPT 181
Query: 79 YVAPEL---AYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ T D +S GV+ + G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYE---AHVADFGIAKFLKPDSSNWTEFAGTYG 78
A+ YLH + I+HRDL +N+LL + E + DFG +K L ++S GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPT 181
Query: 79 YVAPEL---AYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ T D +S GV+ + G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 204
Query: 94 CDVYSFGVLALEVIKGK 110
D++S G + E+++ K
Sbjct: 205 VDIWSVGCIMGEMVRHK 221
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 94 CDVYSFGVLALEVIKGK 110
D++S G + E+++ K
Sbjct: 200 VDIWSVGCIMGEMVRHK 216
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYE---AHVADFGIAKFLKPDSSNWTEFAGTYG 78
A+ YLH + I+HRDL +N+LL + E + DFG +K L ++S GT
Sbjct: 132 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPT 187
Query: 79 YVAPEL---AYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ T D +S GV+ + G P
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 94 CDVYSFGVLALEVIKGK 110
D++S G + E+++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 205
Query: 94 CDVYSFGVLALEVIKGK 110
D++S G + E+++ K
Sbjct: 206 VDIWSVGCIMGEMVRHK 222
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYE---AHVADFGIAKFLKPDSSNWTEFAGTYG 78
A+ YLH + I+HRDL +N+LL + E + DFG +K L ++S GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPT 181
Query: 79 YVAPEL---AYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ T D +S GV+ + G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYE---AHVADFGIAKFLKPDSSNWTEFAGTYG 78
A+ YLH + I+HRDL +N+LL + E + DFG +K L ++S GT
Sbjct: 125 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPT 180
Query: 79 YVAPEL---AYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ T D +S GV+ + G P
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 206
Query: 94 CDVYSFGVLALEVIKGK 110
D++S G + E+++ K
Sbjct: 207 VDIWSVGCIMGEMVRHK 223
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 17 KGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHV---ADFGIAKFLKPDSSNWTEF 73
K + +A+ YLH I HRD+ +NLL + + DFG AK +S T
Sbjct: 168 KSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 224
Query: 74 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y YVAPE+ K + CD +S GV+ ++ G P
Sbjct: 225 YTPY-YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPP 262
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 19/106 (17%)
Query: 20 ADALSYLHHDCF-----PPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA 74
A L++LH + F P I HRD S+N+L+ + +AD G+A + S++ +
Sbjct: 115 ACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIG 173
Query: 75 -----GTYGYVAPELAYTMKITEKC-------DVYSFGVLALEVIK 108
GT Y+APE+ +I C D+++FG++ E+ +
Sbjct: 174 NNPRVGTKRYMAPEV-LDEQIRTDCFESYKWTDIWAFGLVLWEIAR 218
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 243
Query: 94 CDVYSFGVLALEVIKGK 110
D++S G + E+++ K
Sbjct: 244 VDIWSVGCIMGEMVRHK 260
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ + F VHRDL+++N ++ ++ + DFG+ + + +++ G
Sbjct: 134 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGL 188
Query: 77 --YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
+++PE T DV+SFGV+ E+
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ + F VHRDL+++N ++ ++ + DFG+ + + +++ G
Sbjct: 140 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGL 194
Query: 77 --YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
+++PE T DV+SFGV+ E+
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + FG+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEY-EAHVADFGIAKFLKPDSSNWTEFAGTY 77
V +A+ + H+ ++HRD+ +N+L+DL E + DFG LK + +T+F GT
Sbjct: 119 VLEAVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTR 173
Query: 78 GYVAPE-LAYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y PE + Y V+S G+L +++ G P
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ + F VHRDL+++N ++ ++ + DFG+ + + +++ G
Sbjct: 138 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGL 192
Query: 77 --YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
+++PE T DV+SFGV+ E+
Sbjct: 193 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ + F VHRDL+++N ++ ++ + DFG+ + + +++ G
Sbjct: 147 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGL 201
Query: 77 --YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
+++PE T DV+SFGV+ E+
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 243
Query: 94 CDVYSFGVLALEVIKGK 110
D++S G + E+++ K
Sbjct: 244 VDIWSVGCIMGEMVRHK 260
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ + F VHRDL+++N ++ ++ + DFG+ + + +++ G
Sbjct: 140 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGL 194
Query: 77 --YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
+++PE T DV+SFGV+ E+
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ + F VHRDL+++N ++ ++ + DFG+ + + +++ G
Sbjct: 147 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGL 201
Query: 77 --YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
+++PE T DV+SFGV+ E+
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ + F VHRDL+++N ++ ++ + DFG+ + + +++ G
Sbjct: 141 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGL 195
Query: 77 --YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
+++PE T DV+SFGV+ E+
Sbjct: 196 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ + F VHRDL+++N ++ ++ + DFG+ + + +++ G
Sbjct: 137 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGL 191
Query: 77 --YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
+++PE T DV+SFGV+ E+
Sbjct: 192 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 21 DALSYLHHDCFPPIVHRDLSSKNLLLDLE-YEAHVADFGIAKFLKPDSSNWTEFAGTY-- 77
+ L YLH I+H D+ + N+LL + A + DFG A L+PD + G Y
Sbjct: 161 EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 78 ---GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APE+ K D++S + L ++ G HP
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L++ H + I+HRDL +NLL++ + + DFG+A+ + ++ T Y A
Sbjct: 120 GLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRA 176
Query: 82 PE-LAYTMKITEKCDVYSFGVLALEVIKGK 110
P+ L + + D++S G + E+I GK
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 21 DALSYLHHDCFPPIVHRDLSSKNLLLDLE-YEAHVADFGIAKFLKPDSSNWTEFAGTY-- 77
+ L YLH I+H D+ + N+LL + A + DFG A L+PD G Y
Sbjct: 177 EGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP 233
Query: 78 ---GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APE+ K DV+S + L ++ G HP
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTM----- 88
IVHRDL +N+LLD + + DFG + L P E GT Y+APE+
Sbjct: 132 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREVCGTPSYLAPEIIECSMNDNH 190
Query: 89 -KITEKCDVYSFGVLALEVIKGKHP 112
++ D++S GV+ ++ G P
Sbjct: 191 PGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 21 DALSYLHHDCFPPIVHRDLSSKNLLLDLE-YEAHVADFGIAKFLKPDSSNWTEFAGTY-- 77
+ L YLH I+H D+ + N+LL + A + DFG A L+PD + G Y
Sbjct: 177 EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 233
Query: 78 ---GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APE+ K D++S + L ++ G HP
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ F VHRDL+++N ++ ++ + DFG+ + + +++ G
Sbjct: 139 IADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGL 193
Query: 77 --YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML 134
++APE T D++SFGV+ E+ L L+ + L ++
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVM 246
Query: 135 DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
D + E++ ++++ C +P+ RPT
Sbjct: 247 DGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPT 278
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ F VHRDL+++N ++ ++ + DFG+ + + + G
Sbjct: 139 IADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLP 195
Query: 77 YGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEMLDP 136
++APE T D++SFGV+ E+ L L+ + L ++D
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQPYQGLSNEQVLKFVMDG 248
Query: 137 RLPAPSRSVQEKLISIVKVAFSCLNESPESRPT 169
+ E++ ++++ C +P+ RPT
Sbjct: 249 GYLDQPDNCPERVTDLMRM---CWQFNPKMRPT 278
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS----------SNWTEFAGTYGYVAPE 83
++HRDL NLL++ + V DFG+A+ + + S TE T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 84 LAYT-MKITEKCDVYSFGVLALEV 106
+ T K + DV+S G + E+
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTM----- 88
IVHRDL +N+LLD + + DFG + L P E GT Y+APE+
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREVCGTPSYLAPEIIECSMNDNH 203
Query: 89 -KITEKCDVYSFGVLALEVIKGKHP 112
++ D++S GV+ ++ G P
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 21 DALSYLHHDCFPPIVHRDLSSKNLLLDLE-YEAHVADFGIAKFLKPDSSNWTEFAGTY-- 77
+ L YLH I+H D+ + N+LL + A + DFG A L+PD + G Y
Sbjct: 175 EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 78 ---GYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
++APE+ K D++S + L ++ G HP
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ + F VHRDL+++N ++ ++ + DFG+ + + +++ G
Sbjct: 169 IADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGL 223
Query: 77 --YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
+++PE T DV+SFGV+ E+
Sbjct: 224 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFA-GTYGYVAPELAYTMKITE- 92
VHRD+ N+LLD +ADFG L+ D + + A GT Y++PE+ +
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPG 243
Query: 93 ------KCDVYSFGVLALEVIKGKHP 112
+CD ++ GV A E+ G+ P
Sbjct: 244 TGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ F VHRDL+++N ++ ++ + DFG+ + + +++ G
Sbjct: 138 IADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGL 192
Query: 77 --YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
++APE T D++SFGV+ E+
Sbjct: 193 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYE---AHVADFGIAKFLKPDSSNWTEFAGTYG 78
A+ YLH + I+HRDL +N+LL + E + DFG +K L ++S GT
Sbjct: 265 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPT 320
Query: 79 YVAPEL---AYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ T D +S GV+ + G P
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYE---AHVADFGIAKFLKPDSSNWTEFAGTYG 78
A+ YLH + I+HRDL +N+LL + E + DFG +K L ++S GT
Sbjct: 251 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPT 306
Query: 79 YVAPEL---AYTMKITEKCDVYSFGVLALEVIKGKHP 112
Y+APE+ T D +S GV+ + G P
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNW--TEFAGTYGYVAPELAYTMKIT 91
I+HRDL N+++ + + DFG+A + +N+ T + T Y APE+ M
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLA---RTACTNFMMTPYVVTRYYRAPEVILGMGYA 203
Query: 92 EKCDVYSFGVLALEVIKG 109
D++S G + E++KG
Sbjct: 204 ANVDIWSVGCIMGELVKG 221
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L +LH +C IVHRDL +N+L+ +ADFG+A+ + + T Y A
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-TLWYRA 179
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGK 110
PE+ D++S G + E+ + K
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAK----------- 61
+ + A + YL C +HRDL+++N L+ + ++DFG+++
Sbjct: 216 LQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASG 272
Query: 62 FLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXX 120
L+ WT APE + + + DV+SFG+L E G P L
Sbjct: 273 GLRQVPVKWT---------APEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL---- 319
Query: 121 XXXLNTDIELDEMLDP--RLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQLR 178
++ + E ++ RLP P ++ ++ C P RP+ + Q+L+
Sbjct: 320 -----SNQQTREFVEKGGRLPCPELCPD----AVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 223
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 25/107 (23%)
Query: 22 ALSYLHHDCF-----PPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNW----TE 72
L +LH + F P I HRDL SKN+L+ +AD G+A D++
Sbjct: 146 GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNT 205
Query: 73 FAGTYGYVAPEL-----------AYTMKITEKCDVYSFGVLALEVIK 108
GT Y+ PE+ +Y M D+YSFG++ EV +
Sbjct: 206 RVGTKRYMPPEVLDESLNRNHFQSYIM-----ADMYSFGLILWEVAR 247
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DFG+A+ +
Sbjct: 151 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---XVA 204
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + D G+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L +LH +C IVHRDL +N+L+ +ADFG+A+ + T Y A
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LAPVVVTLWYRA 179
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGK 110
PE+ D++S G + E+ + K
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + D G+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 201
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + D G+A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 153 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 208
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 25/117 (21%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDL-----EYEAHVADFGIAKFL---K 64
+ ++ L++LH IVHRDL N+L+ + + +A ++DFG+ K L +
Sbjct: 121 ITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177
Query: 65 PDSSNWTEFAGTYGYVAPELAYTMKITEKC--------DVYSFGVLALEVI-KGKHP 112
S + GT G++APE+ ++E C D++S G + VI +G HP
Sbjct: 178 HSFSRRSGVPGTEGWIAPEM-----LSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 32/127 (25%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLL--------DLEYEAH-----VADFGI 59
++ ++ +A +++LH I+HRDL +N+L+ D + A ++DFG+
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 60 AKFLKPDSS------NWTEFAGTYGYVAPE-------LAYTMKITEKCDVYSFGVLALEV 106
K K DS N +GT G+ APE L ++T D++S G + +
Sbjct: 175 CK--KLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 107 I-KGKHP 112
+ KGKHP
Sbjct: 233 LSKGKHP 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 142 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 197
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 201
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
I + L Y+H I+HRDL NL ++ + E + DF +A+ T +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARH---TDDEMTGYVA 184
Query: 76 TYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
T Y APE+ M + D++S G + E++ G+
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 15 TIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSS---NWT 71
+ + A++Y+H + HRDL +NLL D ++ + DFG+ KP + +
Sbjct: 113 VFRQIVSAVAYVHSQGY---AHRDLKPENLLFDEYHKLKLIDFGLCA--KPKGNKDYHLQ 167
Query: 72 EFAGTYGYVAPELAYTMK-ITEKCDVYSFGVLALEVIKGKHPRD 114
G+ Y APEL + + DV+S G+L ++ G P D
Sbjct: 168 TCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 135 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 190
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 1 DAAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA 60
++ A L Q ++ VA + YL F +HR+L+++N+L+ Y A +ADFG++
Sbjct: 130 NSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRNLAARNILVGENYVAKIADFGLS 186
Query: 61 KFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVI 107
+ + L Y++ T DV+S+GVL E++
Sbjct: 187 RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 138 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 193
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 4 AQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFL 63
++LD + + + + Y+H +++RDL N+ L + + DFG+ L
Sbjct: 116 GEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL 172
Query: 64 KPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVI 107
K D GT Y++PE + ++ D+Y+ G++ E++
Sbjct: 173 KNDGKR-XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 187 AVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 186 AVDIWSLGCIFAEMV 200
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 7 LDWSQRMNTIKGVADALSYLH-HDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKP 65
LD+ + + + + + H H+ I+HRD+ +N+L+ + DFG A+ L
Sbjct: 121 LDYQVVQKYLFQIINGIGFCHSHN----IIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176
Query: 66 DSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
+ + T Y APEL +K + DV++ G L E+ G+
Sbjct: 177 PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 186 AVDIWSLGCIFAEMV 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 213 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 268
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 186 AVDIWSLGCIFAEMV 200
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 223
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 187 AVDIWSLGCIFAEMV 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 187
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 188 AVDIWSLGCIFAEMV 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 182
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 183 AVDIWSLGCIFAEMV 197
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YR 189
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 187 AVDIWSLGCIFAEMV 201
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 172 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 227
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 185 AVDIWSLGCIFAEMV 199
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 187 AVDIWSLGCIFAEMV 201
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 170 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 225
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 162 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 217
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 187 AVDIWSLGCIFAEMV 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 182
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 183 AVDIWSLGCIFAEMV 197
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ + F VHRDL+++N + ++ + DFG+ + + +++ G
Sbjct: 134 IADGMAYLNANKF---VHRDLAARNCXVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGL 188
Query: 77 --YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
+++PE T DV+SFGV+ E+
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + + IK + D ++YLH I H DL +N +LLD + DF
Sbjct: 107 AQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G+A ++ D + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 164 GLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L +LH +C IVHRDL +N+L+ +ADFG+A+ + T Y A
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LDPVVVTLWYRA 179
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGK 110
PE+ D++S G + E+ + K
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 185 AVDIWSLGCIFAEMV 199
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 147 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 202
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
IK V ++ SY+H++ I HRD+ N+L+D ++DFG ++++ + G
Sbjct: 157 IKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR--G 212
Query: 76 TYGYVAPEL-----AYTMKITEKCDVYSFGV 101
TY ++ PE +Y K D++S G+
Sbjct: 213 TYEFMPPEFFSNESSYN---GAKVDIWSLGI 240
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + + IK + D ++YLH I H DL +N +LLD + DF
Sbjct: 107 AQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G+A ++ D + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 164 GLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 139 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 194
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + + IK + D ++YLH I H DL +N +LLD + DF
Sbjct: 107 AQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G+A ++ D + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 164 GLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + + IK + D ++YLH I H DL +N +LLD + DF
Sbjct: 107 AQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G+A ++ D + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 164 GLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 186
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 187 AVDIWSLGCIFAEMV 201
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + + IK + D ++YLH I H DL +N +LLD + DF
Sbjct: 107 AQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G+A ++ D + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 164 GLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 185
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 186 AVDIWSLGCIFAEMV 200
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 185 AVDIWSLGCIFAEMV 199
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 184
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 185 AVDIWSLGCIFAEMV 199
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
++HRDL +NLL++ E +ADFG+A+ + T Y APE+ K +
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 93 KCDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 184 AVDIWSLGCIFAEMV 198
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 26/174 (14%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVA---DFGIAKFLKPDSSN 69
++ + +A YL + F +HRD++++N LL VA DFG+A+ + ++
Sbjct: 143 LHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAS 197
Query: 70 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
+ G ++ PE T K D +SFGVL E+ G P + L
Sbjct: 198 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVL 255
Query: 125 NTDIELDEMLDPR-LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
M P+ P P + ++ C PE RP I+ +++
Sbjct: 256 EFVTSGGRMDPPKNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + + IK + D ++YLH I H DL +N +LLD + DF
Sbjct: 107 AQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163
Query: 58 GIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G+A ++ D + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 164 GLAHEIE-DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 26/174 (14%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVA---DFGIAKFLKPDSSN 69
++ + +A YL + F +HRD++++N LL VA DFG+A+ + ++
Sbjct: 143 LHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAS 197
Query: 70 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
+ G ++ PE T K D +SFGVL E+ G P + L
Sbjct: 198 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVL 255
Query: 125 NTDIELDEMLDPR-LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
M P+ P P + ++ C PE RP I+ +++
Sbjct: 256 EFVTSGGRMDPPKNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 189
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 189
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTYGYV 80
+L+Y+H I HRD+ +NLLLD + + DFG AK L N + Y Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YR 189
Query: 81 APELAY-TMKITEKCDVYSFGVLALEVIKGK 110
APEL + T DV+S G + E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 26/174 (14%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVA---DFGIAKFLKPDSSN 69
++ + +A YL + F +HRD++++N LL VA DFG+A+ + ++
Sbjct: 135 LHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAS 189
Query: 70 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
+ G ++ PE T K D +SFGVL E+ G P + L
Sbjct: 190 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVL 247
Query: 125 NTDIELDEMLDPR-LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
M P+ P P + ++ C PE RP I+ +++
Sbjct: 248 EFVTSGGRMDPPKNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERI 291
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 26/174 (14%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVA---DFGIAKFLKPDSSN 69
++ + +A YL + F +HRD++++N LL VA DFG+A+ + ++
Sbjct: 150 LHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAS 204
Query: 70 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
+ G ++ PE T K D +SFGVL E+ G P + L
Sbjct: 205 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVL 262
Query: 125 NTDIELDEMLDPR-LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
M P+ P P + ++ C PE RP I+ +++
Sbjct: 263 EFVTSGGRMDPPKNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERI 306
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 26/174 (14%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVA---DFGIAKFLKPDSSN 69
++ + +A YL + F +HRD++++N LL VA DFG+A+ + ++
Sbjct: 160 LHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAS 214
Query: 70 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
+ G ++ PE T K D +SFGVL E+ G P + L
Sbjct: 215 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVL 272
Query: 125 NTDIELDEMLDPR-LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
M P+ P P + ++ C PE RP I+ +++
Sbjct: 273 EFVTSGGRMDPPKNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERI 316
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 26/174 (14%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVA---DFGIAKFLKPDSSN 69
++ + +A YL + F +HRD++++N LL VA DFG+A+ + ++
Sbjct: 144 LHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAS 198
Query: 70 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
+ G ++ PE T K D +SFGVL E+ G P + L
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVL 256
Query: 125 NTDIELDEMLDPR-LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
M P+ P P + ++ C PE RP I+ +++
Sbjct: 257 EFVTSGGRMDPPKNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 26/174 (14%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVA---DFGIAKFLKPDSSN 69
++ + +A YL + F +HRD++++N LL VA DFG+A+ + ++
Sbjct: 158 LHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAS 212
Query: 70 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
+ G ++ PE T K D +SFGVL E+ G P + L
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVL 270
Query: 125 NTDIELDEMLDPR-LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
M P+ P P + ++ C PE RP I+ +++
Sbjct: 271 EFVTSGGRMDPPKNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 26/174 (14%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVA---DFGIAKFLKPDSSN 69
++ + +A YL + F +HRD++++N LL VA DFG+A+ + ++
Sbjct: 144 LHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAS 198
Query: 70 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
+ G ++ PE T K D +SFGVL E+ G P + L
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVL 256
Query: 125 NTDIELDEMLDPR-LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
M P+ P P + ++ C PE RP I+ +++
Sbjct: 257 EFVTSGGRMDPPKNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 26/174 (14%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVA---DFGIAKFLKPDSSN 69
++ + +A YL + F +HRD++++N LL VA DFG+A+ + ++
Sbjct: 170 LHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAS 224
Query: 70 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
+ G ++ PE T K D +SFGVL E+ G P + L
Sbjct: 225 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVL 282
Query: 125 NTDIELDEMLDPR-LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
M P+ P P + ++ C PE RP I+ +++
Sbjct: 283 EFVTSGGRMDPPKNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERI 326
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 26/174 (14%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVA---DFGIAKFLKPDSSN 69
++ + +A YL + F +HRD++++N LL VA DFG+A+ + +
Sbjct: 161 LHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAG 215
Query: 70 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
+ G ++ PE T K D +SFGVL E+ G P + L
Sbjct: 216 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVL 273
Query: 125 NTDIELDEMLDPR-LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
M P+ P P + ++ C PE RP I+ +++
Sbjct: 274 EFVTSGGRMDPPKNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERI 317
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 26/174 (14%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVA---DFGIAKFLKPDSSN 69
++ + +A YL + F +HRD++++N LL VA DFG+A+ + ++
Sbjct: 158 LHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAS 212
Query: 70 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
+ G ++ PE T K D +SFGVL E+ G P + L
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVL 270
Query: 125 NTDIELDEMLDPR-LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
M P+ P P + ++ C PE RP I+ +++
Sbjct: 271 EFVTSGGRMDPPKNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 26/174 (14%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVA---DFGIAKFLKPDSSN 69
++ + +A YL + F +HRD++++N LL VA DFG+A+ + +
Sbjct: 184 LHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAG 238
Query: 70 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
+ G ++ PE T K D +SFGVL E+ G P + L
Sbjct: 239 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVL 296
Query: 125 NTDIELDEMLDPR-LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
M P+ P P + ++ C PE RP I+ +++
Sbjct: 297 EFVTSGGRMDPPKNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERI 340
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 26/174 (14%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVA---DFGIAKFLKPDSSN 69
++ + +A YL + F +HRD++++N LL VA DFG+A+ + ++
Sbjct: 158 LHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAS 212
Query: 70 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
+ G ++ PE T K D +SFGVL E+ G P + L
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVL 270
Query: 125 NTDIELDEMLDPR-LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
M P+ P P + ++ C PE RP I+ +++
Sbjct: 271 EFVTSGGRMDPPKNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ F VHR+L+++N ++ ++ + DFG+ + + +++ G
Sbjct: 139 IADGMAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGL 193
Query: 77 --YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
++APE T D++SFGV+ E+
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGT-- 76
+AD ++YL+ F VHR+L+++N ++ ++ + DFG+ + + +++ G
Sbjct: 140 IADGMAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGL 194
Query: 77 --YGYVAPELAYTMKITEKCDVYSFGVLALEV 106
++APE T D++SFGV+ E+
Sbjct: 195 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 26/174 (14%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVA---DFGIAKFLKPDSSN 69
++ + +A YL + F +HRD++++N LL VA DFG+A+ + ++
Sbjct: 144 LHVARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIY--RAS 198
Query: 70 WTEFAGT----YGYVAPELAYTMKITEKCDVYSFGVLALEVIK-GKHPRDFLXXXXXXXL 124
+ G ++ PE T K D +SFGVL E+ G P + L
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVL 256
Query: 125 NTDIELDEMLDPR-LPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
M P+ P P + ++ C PE RP I+ +++
Sbjct: 257 EFVTSGGRMDPPKNCPGP----------VYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 34 IVHRDLSSKNLLLDLEYE-AHVADFGIAKFLKPDSSNWTEFAGTYGYVAPE-LAYTMKIT 91
+VHRD+ +N+L+DL A + DFG L +T+F GT Y PE ++
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFGSGALLH--DEPYTDFDGTRVYSPPEWISRHQYHA 217
Query: 92 EKCDVYSFGVLALEVIKGKHP--RDFLXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKL 149
V+S G+L +++ G P RD E+L+ L P+ V
Sbjct: 218 LPATVWSLGILLYDMVCGDIPFERD----------------QEILEAELHFPAH-VSPDC 260
Query: 150 ISIVKVAFSCLNESPESRPTMK 171
++++ CL P SRP+++
Sbjct: 261 CALIR---RCLAPKPSSRPSLE 279
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTM----- 88
IVHRDL +N+LLD + + DFG + L P GT Y+APE+
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLRSVCGTPSYLAPEIIECSMNDNH 203
Query: 89 -KITEKCDVYSFGVLALEVIKGKHP 112
++ D++S GV+ ++ G P
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEF---AGTYGYVAPELAYTMK- 89
++HRD+ N+LLD +ADFG +K D + GT Y++PE+ +
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHCDTAVGTPDYISPEVLKSQGG 252
Query: 90 ---ITEKCDVYSFGVLALEVIKGKHP 112
+CD +S GV E++ G P
Sbjct: 253 DGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 210
Query: 94 CDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 211 VDLWSVGCIMGEMV 224
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 21 DALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWT--EFAGTYG 78
D L YLH IVH+D+ NLLL ++ G+A+ L P +++ T G+
Sbjct: 120 DGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPA 176
Query: 79 YVAPELAYTMKITE--KCDVYSFGVLALEVIKGKHP 112
+ PE+A + K D++S GV + G +P
Sbjct: 177 FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ S T + T Y APE+ M E
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVILGMGYKEN 199
Query: 94 CDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 200 VDLWSVGCIMGEMV 213
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 5 QELDWSQRM---NTIKGVA----DALSYLH-HDCFPPIVHRDLSSKNLLLDLEYEAHVAD 56
ELD QR + +K + A+++ H H+C +HRD+ +N+L+ + D
Sbjct: 90 HELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC----IHRDVKPENILITKHSVIKLCD 145
Query: 57 FGIAKFLKPDSSNWTEFAGTYGYVAPELAYT-MKITEKCDVYSFGVLALEVIKG 109
FG A+ L S + + T Y +PEL + DV++ G + E++ G
Sbjct: 146 FGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 25/110 (22%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLL-LDLEYEA------------------HVADFGI 59
+ AL +LH + + H DL +N+L ++ E+E VADFG
Sbjct: 132 LCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 188
Query: 60 AKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKG 109
A F D + T T Y PE+ + + CDV+S G + E +G
Sbjct: 189 ATF---DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 25/110 (22%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLL-LDLEYEA------------------HVADFGI 59
+ AL +LH + + H DL +N+L ++ E+E VADFG
Sbjct: 141 LCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 197
Query: 60 AKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKG 109
A F D + T T Y PE+ + + CDV+S G + E +G
Sbjct: 198 ATF---DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA-KFLKPDSSNWTEFAGTYGYV 80
AL +H F +HRD+ N+LLD +ADFG K K GT Y+
Sbjct: 180 ALDAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 236
Query: 81 APELAYTMK----ITEKCDVYSFGVLALEVIKGKHP 112
+PE+ + +CD +S GV E++ G P
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 25/110 (22%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLL-LDLEYEA------------------HVADFGI 59
+ AL +LH + + H DL +N+L ++ E+E VADFG
Sbjct: 164 LCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 220
Query: 60 AKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKG 109
A F D + T T Y PE+ + + CDV+S G + E +G
Sbjct: 221 ATF---DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA-KFLKPDSSNWTEFAGTYGYV 80
AL +H F +HRD+ N+LLD +ADFG K K GT Y+
Sbjct: 185 ALDAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 81 APELAYTMK----ITEKCDVYSFGVLALEVIKGKHP 112
+PE+ + +CD +S GV E++ G P
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTY- 77
+A + YL F +HRDL+++N +L + VADFG+++ + A
Sbjct: 146 IACGMEYLSSRNF---IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLP 202
Query: 78 -GYVAPELAYTMKITEKCDVYSFGVLALEVI-KGKHPRDFLXXXXXXXLNTDIELDEMLD 135
++A E T DV++FGV E++ +G+ P + N +I +
Sbjct: 203 VKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE-------NAEIYNYLIGG 255
Query: 136 PRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMKIVSQQL 177
RL P ++E + + + C + P+ RP+ + +L
Sbjct: 256 NRLKQPPECMEE----VYDLMYQCWSADPKQRPSFTCLRMEL 293
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEY--EAHVADFGIAKFLKPDSSNWTEF 73
++ V L ++H + + VH DL +N++ + E + DFG+ L P S
Sbjct: 261 MRQVCKGLCHMHENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT- 316
Query: 74 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT + APE+A + D++S GVL+ ++ G P
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 5 QELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK 64
+ +D +R + K + +A+ +H IVH DL N L+ ++ + DFGIA ++
Sbjct: 106 KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQ 161
Query: 65 PDSSNWTEFA--GTYGYVAPELAYTMKITEK-----------CDVYSFGVLALEVIKGKH 111
PD+++ + + GT Y+ PE M + + DV+S G + + GK
Sbjct: 162 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 221
Query: 112 PRDFLXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESR 167
P + +N +L ++DP + EK + V CL P+ R
Sbjct: 222 PFQQI-------INQISKLHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKRDPKQR 268
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIA-KFLKPDSSNWTEFAGTYGYV 80
AL +H F +HRD+ N+LLD +ADFG K K GT Y+
Sbjct: 185 ALDAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 81 APELAYTMK----ITEKCDVYSFGVLALEVIKGKHP 112
+PE+ + +CD +S GV E++ G P
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEY--EAHVADFGIAKFLKPDSSNWTEF 73
++ V L ++H + + VH DL +N++ + E + DFG+ L P S
Sbjct: 155 MRQVCKGLCHMHENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT- 210
Query: 74 AGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT + APE+A + D++S GVL+ ++ G P
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 5 QELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK 64
+ +D +R + K + +A+ +H IVH DL N L+ ++ + DFGIA ++
Sbjct: 150 KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQ 205
Query: 65 PDSSNWTEFA--GTYGYVAPELAYTMKITEK-----------CDVYSFGVLALEVIKGKH 111
PD+++ + + GT Y+ PE M + + DV+S G + + GK
Sbjct: 206 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 265
Query: 112 PRDFLXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESR 167
P +N +L ++DP + EK + V CL P+ R
Sbjct: 266 P-------FQQIINQISKLHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKRDPKQR 312
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 5 QELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK 64
+ +D +R + K + +A+ +H IVH DL N L+ ++ + DFGIA ++
Sbjct: 102 KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQ 157
Query: 65 PDSSNWTEFA--GTYGYVAPELAYTMKITEK-----------CDVYSFGVLALEVIKGKH 111
PD+++ + + GT Y+ PE M + + DV+S G + + GK
Sbjct: 158 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 217
Query: 112 PRDFLXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESR 167
P +N +L ++DP + EK + V CL P+ R
Sbjct: 218 P-------FQQIINQISKLHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKRDPKQR 264
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 5 QELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK 64
+ +D +R + K + +A+ +H IVH DL N L+ ++ + DFGIA ++
Sbjct: 122 KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQ 177
Query: 65 PDSSNWTEFA--GTYGYVAPELAYTMKITEK-----------CDVYSFGVLALEVIKGKH 111
PD+++ + + GT Y+ PE M + + DV+S G + + GK
Sbjct: 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 237
Query: 112 PRDFLXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESR 167
P +N +L ++DP + EK + V CL P+ R
Sbjct: 238 P-------FQQIINQISKLHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKRDPKQR 284
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 35 VHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDS-SNWTEFAGTYGYVAPELAYTMKITEK 93
HRD+ +N+L+ + A++ DFGIA + + GT Y APE T +
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 94 CDVYSFGVLALEVIKGKHP 112
D+Y+ + E + G P
Sbjct: 216 ADIYALTCVLYECLTGSPP 234
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKI-TE 92
++HRDL +NLL++ E +ADFG+A+ ++ T Y P++ + K+ +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 93 KCDVYSFGVLALEVIKGKHP 112
D++S G + E+ P
Sbjct: 182 SIDMWSAGCIFAELANAARP 201
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L +LH +VHRDL +N+L+ + +ADFG+A+ + T T Y A
Sbjct: 132 GLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRA 187
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGK 110
PE+ D++S G + E+ + K
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 5 QELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK 64
+ +D +R + K + +A+ +H IVH DL N L+ ++ + DFGIA ++
Sbjct: 103 KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQ 158
Query: 65 PDSSNWTEFA--GTYGYVAPELAYTMKITEK-----------CDVYSFGVLALEVIKGKH 111
PD+++ + + GT Y+ PE M + + DV+S G + + GK
Sbjct: 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 218
Query: 112 PRDFLXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESR 167
P + +N +L ++DP + EK + V CL P+ R
Sbjct: 219 PFQQI-------INQISKLHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKRDPKQR 265
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ E Y Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-YRAPEVILGMGYKEN 205
Query: 94 CDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 206 VDIWSVGCIMGEMV 219
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L +LH +VHRDL +N+L+ + +ADFG+A+ + T T Y A
Sbjct: 132 GLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRA 187
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGK 110
PE+ D++S G + E+ + K
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 15 TIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA---HVADFGIAKFLKPD----- 66
++ VA AL +LH+ I HRDL +N+L + + + DFG+ +K +
Sbjct: 116 VVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSP 172
Query: 67 --SSNWTEFAGTYGYVAPEL--AYTMKIT---EKCDVYSFGVLALEVIKGKHP 112
+ G+ Y+APE+ A++ + + ++CD++S GV+ ++ G P
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L +LH +VHRDL +N+L+ + +ADFG+A+ + T T Y A
Sbjct: 132 GLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRA 187
Query: 82 PELAYTMKITEKCDVYSFGVLALEVIKGK 110
PE+ D++S G + E+ + K
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 5 QELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK 64
+ +D +R + K + +A+ +H IVH DL N L+ ++ + DFGIA ++
Sbjct: 150 KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQ 205
Query: 65 PDSSNWTEFA--GTYGYVAPELAYTMKITEK-----------CDVYSFGVLALEVIKGKH 111
PD+++ + + GT Y+ PE M + + DV+S G + + GK
Sbjct: 206 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 265
Query: 112 PRDFLXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESR 167
P + +N +L ++DP + EK + V CL P+ R
Sbjct: 266 PFQQI-------INQISKLHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKRDPKQR 312
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 34 IVHRDLSSKNLLLD-LEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAY-TMKIT 91
+ HRD+ N+L++ + + DFG AK L P N Y Y APEL + T
Sbjct: 152 VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY-YRAPELIFGNQHYT 210
Query: 92 EKCDVYSFGVLALEVIKGK 110
D++S G + E++ G+
Sbjct: 211 TAVDIWSVGCIFAEMMLGE 229
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAG 75
+ + A+ YL I+HRD+ +N+++ ++ + DFG A +L+ +T F G
Sbjct: 136 FRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT-FCG 191
Query: 76 TYGYVAPE-LAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNTDIELDEML 134
T Y APE L + +++S GV ++ ++P EL+E +
Sbjct: 192 TIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF--------------CELEETV 237
Query: 135 DPRLPAPSRSVQEKLISIVKVAFSCLNESPESRPTMK 171
+ + P V ++L+S+V L PE R T++
Sbjct: 238 EAAI-HPPYLVSKELMSLVS---GLLQPVPERRTTLE 270
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + +K + D + YLH I H DL +N +LLD + DF
Sbjct: 107 AEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDF 163
Query: 58 GIAKFLKPDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GIA K ++ N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 164 GIAH--KIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + +K + D + YLH I H DL +N +LLD + DF
Sbjct: 100 AEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDF 156
Query: 58 GIAKFLKPDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GIA K ++ N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 157 GIAH--KIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + +K + D + YLH I H DL +N +LLD + DF
Sbjct: 121 AEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDF 177
Query: 58 GIAKFLKPDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GIA K ++ N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 178 GIAH--KIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 16 IKGVADALSYLH-HDCFPPIVHRDLSSKNLLLDLEYEAHV---ADFGIAKFLKPDSSNWT 71
++ + A+ +LH H+ I HRD+ +NLL + + V DFG AK ++
Sbjct: 134 MRDIGTAIQFLHSHN----IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP 189
Query: 72 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
+ T YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 190 CY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 228
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 16 IKGVADALSYLH-HDCFPPIVHRDLSSKNLLLDLEYEAHV---ADFGIAKFLKPDSSNWT 71
++ + A+ +LH H+ I HRD+ +NLL + + V DFG AK ++
Sbjct: 115 MRDIGTAIQFLHSHN----IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP 170
Query: 72 EFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
+ T YVAPE+ K + CD++S GV+ ++ G P
Sbjct: 171 CY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 209
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 18/113 (15%)
Query: 15 TIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA---HVADFGIAKFLKPDSS--- 68
++ VA AL +LH I HRDL +N+L + + + DF + +K ++S
Sbjct: 116 VVRDVAAALDFLHTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTP 172
Query: 69 ----NWTEFAGTYGYVAPELA--YTMKIT---EKCDVYSFGVLALEVIKGKHP 112
T G+ Y+APE+ +T + T ++CD++S GV+ ++ G P
Sbjct: 173 ITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKITEK 93
I+HRDL N+++ + + DFG+A+ E Y Y APE+ M E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-YRAPEVILGMGYKEN 205
Query: 94 CDVYSFGVLALEVI 107
D++S G + E++
Sbjct: 206 VDLWSVGCIMGEMV 219
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
+VHRDL N+LL + + DF +A+ D +N T + Y APEL K T+
Sbjct: 155 VVHRDLHPGNILLADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTK 213
Query: 93 KCDVYSFGVLALEVIKGK 110
D++S G + E+ K
Sbjct: 214 LVDMWSAGCVMAEMFNRK 231
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLL---DLEYEAHVADFGIAKFLKPDSSNWTE 72
+K + + + ++H I+H DL +N+L D + + + DFG+A+ KP
Sbjct: 193 MKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVN 248
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHPRDFLXXXXXXXLNT------ 126
F GT ++APE+ ++ D++S GV+A ++ G P FL LN
Sbjct: 249 F-GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP--FLGDNDAETLNNILACRW 305
Query: 127 DIELDEMLD 135
D+E +E D
Sbjct: 306 DLEDEEFQD 314
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMK-ITE 92
+VHRDL N+LL + + DF +A+ D +N T + Y APEL K T+
Sbjct: 155 VVHRDLHPGNILLADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTK 213
Query: 93 KCDVYSFGVLALEVIKGK 110
D++S G + E+ K
Sbjct: 214 LVDMWSAGCVMAEMFNRK 231
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK--PDSSNWT-------- 71
A+ ++H PPI+HRDL +NLLL + + DFG A + PD S W+
Sbjct: 148 AVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYS-WSAQRRALVE 205
Query: 72 ---EFAGTYGYVAPE---LAYTMKITEKCDVYSFGVLALEVIKGKHP 112
T Y PE L I EK D+++ G + + +HP
Sbjct: 206 EEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 34 IVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVAPELAYTMKI-TE 92
++HRDL +NLL++ E +A+FG+A+ ++ T Y P++ + K+ +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 93 KCDVYSFGVLALEVIKGKHP 112
D++S G + E+ P
Sbjct: 182 SIDMWSAGCIFAELANAGRP 201
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 13 MNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVA--DFGIAKFLKPDSSNW 70
+N ++ + L ++H IVH D+ +N++ + + + V DFG+A L PD
Sbjct: 152 INYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208
Query: 71 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
A T + APE+ + D+++ GVL ++ G P
Sbjct: 209 VTTA-TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLKPDSSNWTEFAGTYGYVA 81
L+Y H ++HRDL +NLL++ E +ADFG+A+ + + T Y
Sbjct: 112 GLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRP 168
Query: 82 PE-LAYTMKITEKCDVYSFGVLALEVIKGK 110
P+ L + + + D++ G + E+ G+
Sbjct: 169 PDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADFGIAKFLKPDSSN-W 70
+K + + + YLH I H DL +N +LLD + DFG+A K D N +
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 71 TEFAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 175 KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 5 QELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEAHVADFGIAKFLK 64
+ +D +R + K + +A+ +H IVH DL N L+ ++ + DFGIA ++
Sbjct: 150 KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQ 205
Query: 65 PDSSNWTEFA--GTYGYVAPELAYTMKITEK-----------CDVYSFGVLALEVIKGKH 111
PD+++ + + G Y+ PE M + + DV+S G + + GK
Sbjct: 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 265
Query: 112 PRDFLXXXXXXXLNTDIELDEMLDPRLPAPSRSVQEKLISIVKVAFSCLNESPESR 167
P + +N +L ++DP + EK + V CL P+ R
Sbjct: 266 PFQQI-------INQISKLHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKRDPKQR 312
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTY 77
+ AL Y H I+HRD+ N+L+D E+ + D+G+A+F P A Y
Sbjct: 140 ILKALDYCHS---MGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 78 GYVAPELAYTMKITE-KCDVYSFGVLALEVIKGKHP 112
+ PEL ++ + D++S G + +I K P
Sbjct: 197 -FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 22 ALSYLHHDCFPPIVHRDLSSKNLLLDLE-YEAHVADFGIAKFLKPDSS---NWTEFAGTY 77
L Y+H ++HRDL NL ++ E + DFG+A+ + P S + +E T
Sbjct: 132 GLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 78 GYVAPELAYT-MKITEKCDVYSFGVLALEVIKGK 110
Y +P L + T+ D+++ G + E++ GK
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA---HVADFGIAKFLKPDSSNWTE 72
++ + +AL Y H + I+HRD+ +N+LL + + + DFG+A L
Sbjct: 136 MRQILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGG 192
Query: 73 FAGTYGYVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
GT ++APE+ + DV+ GV+ ++ G P
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 16 IKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADFGIAKFLKPDSSNWT 71
+K + + + YLH I H DL +N +LLD + DFG+A K D N
Sbjct: 120 LKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGN-- 172
Query: 72 EFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + +K + + + YLH I H DL +N +LLD + DF
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 58 GIAKFLKPDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G+A K D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 163 GLAH--KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + +K + + + YLH I H DL +N +LLD + DF
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 58 GIAKFLKPDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G+A K D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 163 GLAH--KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTY 77
+ AL Y H I+HRD+ N+++D E+ + D+G+A+F P A Y
Sbjct: 140 ILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 78 GYVAPELAYTMKITE-KCDVYSFGVLALEVIKGKHP 112
+ PEL ++ + D++S G + +I K P
Sbjct: 197 -FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + +K + + + YLH I H DL +N +LLD + DF
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 58 GIAKFLKPDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G+A K D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 163 GLAH--KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + +K + + + YLH I H DL +N +LLD + DF
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 58 GIAKFLKPDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G+A K D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 163 GLAH--KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTY 77
+ AL Y H I+HRD+ N+++D E+ + D+G+A+F P A Y
Sbjct: 140 ILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 78 GYVAPELAYTMKITE-KCDVYSFGVLALEVIKGKHP 112
+ PEL ++ + D++S G + +I K P
Sbjct: 197 -FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + +K + + + YLH I H DL +N +LLD + DF
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 58 GIAKFLKPDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G+A K D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 163 GLAH--KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 19 VADALSYLHHDCFPPIVHRDLSSKNLLLDLEYEA-HVADFGIAKFLKPDSSNWTEFAGTY 77
+ AL Y H I+HRD+ N+++D E+ + D+G+A+F P A Y
Sbjct: 140 ILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 78 GYVAPELAYTMKITE-KCDVYSFGVLALEVIKGKHP 112
+ PEL ++ + D++S G + +I K P
Sbjct: 197 -FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + +K + + + YLH I H DL +N +LLD + DF
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 58 GIAKFLKPDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G+A K D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 163 GLAH--KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + +K + + + YLH I H DL +N +LLD + DF
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 58 GIAKFLKPDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G+A K D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 163 GLAH--KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + +K + + + YLH I H DL +N +LLD + DF
Sbjct: 105 AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDF 161
Query: 58 GIAKFLKPDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G+A K D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 162 GLAH--KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 2 AAAQELDWSQRMNTIKGVADALSYLHHDCFPPIVHRDLSSKN-LLLDLEY---EAHVADF 57
A + L + +K + + + YLH I H DL +N +LLD + DF
Sbjct: 106 AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDF 162
Query: 58 GIAKFLKPDSSNWTEFAGTYG---YVAPELAYTMKITEKCDVYSFGVLALEVIKGKHP 112
G+A K D N EF +G +VAPE+ + + D++S GV+ ++ G P
Sbjct: 163 GLAH--KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,181,227
Number of Sequences: 62578
Number of extensions: 191864
Number of successful extensions: 2082
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 562
Number of HSP's gapped (non-prelim): 1095
length of query: 179
length of database: 14,973,337
effective HSP length: 93
effective length of query: 86
effective length of database: 9,153,583
effective search space: 787208138
effective search space used: 787208138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)