Your job contains 1 sequence.
>042883
MEEHSTATGAVVPALKSEPPFSLRTAVEVDRDTEVDRDTLCPICKQLMTDAFMTACGHSF
CYTCIFTHLRNKSDCPCCGCHLTCKHIFPNLLLNKLLKKTSARQVANAASPIEHLRLALQ
QGCEVSVKELDGLLSLLVAKKRKLEQEEAETNMQILLNFLHCLRKQKLEELNEIQADLRC
IEEDVYAVEKHKIELYRARGRCLAKLRTFDDFTASKKTDEKAQISSQGLLMKDACGGPDS
PYASQSGLTAARKQRVRAQLNDLKEYYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLED
FRSVLATFTQYSRLRVIAELRHGDLFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSS
VVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEH
EKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF
LSNNELASASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY
HKAISKPAASHRFGSDADHVDDDMGSYFISAVCWKSDSPTMLTANRKGAIKVLVLAA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042883
(597 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2059359 - symbol:COP1 "CONSTITUTIVE PHOTOMORPH... 915 2.6e-130 2
DICTYBASE|DDB_G0288453 - symbol:DDB_G0288453 "E3 ubiquiti... 517 1.5e-74 3
UNIPROTKB|E2RRJ5 - symbol:RFWD2 "Uncharacterized protein"... 657 1.8e-64 1
UNIPROTKB|F1MHX1 - symbol:RFWD2 "Uncharacterized protein"... 656 2.3e-64 1
UNIPROTKB|Q8NHY2 - symbol:RFWD2 "E3 ubiquitin-protein lig... 656 2.3e-64 1
MGI|MGI:1347046 - symbol:Rfwd2 "ring finger and WD repeat... 655 2.9e-64 1
UNIPROTKB|F1NQ64 - symbol:RFWD2 "Uncharacterized protein"... 655 2.9e-64 1
ZFIN|ZDB-GENE-070410-134 - symbol:rfwd2 "ring finger and ... 633 6.2e-62 1
UNIPROTKB|H0Y339 - symbol:RFWD2 "E3 ubiquitin-protein lig... 475 2.6e-55 2
TAIR|locus:2039139 - symbol:SPA1 "SUPPRESSOR OF PHYA-105 ... 507 1.4e-47 1
RGD|1304773 - symbol:Rfwd2 "ring finger and WD repeat dom... 468 1.9e-44 1
TAIR|locus:2136133 - symbol:SPA2 "SPA1-related 2" species... 447 2.8e-44 2
TAIR|locus:2037005 - symbol:SPA4 "SPA1-related 4" species... 463 3.2e-43 1
TAIR|locus:2172883 - symbol:RUP2 "AT5G23730" species:3702... 280 9.2e-24 1
TAIR|locus:2145111 - symbol:RUP1 "AT5G52250" species:3702... 273 7.4e-22 1
UNIPROTKB|F1S705 - symbol:RFWD2 "Uncharacterized protein"... 277 9.5e-22 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 190 4.0e-12 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 187 8.0e-12 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 183 1.7e-11 1
FB|FBgn0027524 - symbol:CG3909 species:7227 "Drosophila m... 184 1.8e-11 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 183 2.5e-11 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 183 2.5e-11 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 183 2.5e-11 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 183 2.5e-11 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 183 2.5e-11 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 183 3.3e-11 1
DICTYBASE|DDB_G0270992 - symbol:sec31 "putative transport... 186 1.5e-10 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 174 2.7e-10 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 155 3.0e-10 1
UNIPROTKB|E9PJB5 - symbol:RFWD2 "E3 ubiquitin-protein lig... 155 3.0e-10 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 176 8.6e-10 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 171 1.8e-09 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 168 1.8e-09 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 168 1.8e-09 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 183 1.9e-09 2
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 167 2.9e-09 1
UNIPROTKB|Q6GMD2 - symbol:wdr61 "WD repeat-containing pro... 163 3.5e-09 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 163 4.0e-09 1
DICTYBASE|DDB_G0276283 - symbol:utp13 "U3 snoRNP protein"... 170 4.9e-09 1
FB|FBgn0027518 - symbol:CG7609 species:7227 "Drosophila m... 169 5.1e-09 1
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 169 7.0e-09 2
FB|FBgn0036733 - symbol:U4-U6-60K "U4-U6 small nuclear ri... 163 7.1e-09 2
GENEDB_PFALCIPARUM|PFB0640c - symbol:PfSec31p "COPII-coat... 170 9.1e-09 1
UNIPROTKB|O96221 - symbol:Sec31p "Sec31p putative" specie... 170 9.1e-09 1
TAIR|locus:2087433 - symbol:AT3G63460 "AT3G63460" species... 168 1.1e-08 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 148 1.2e-08 1
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 166 1.2e-08 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 159 1.2e-08 1
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 167 1.2e-08 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 160 1.3e-08 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 161 1.3e-08 1
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 161 1.4e-08 1
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 158 1.5e-08 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 159 1.7e-08 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 160 1.8e-08 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 160 1.8e-08 1
POMBASE|SPBC1A4.07c - symbol:SPBC1A4.07c "U3 snoRNP-assoc... 160 1.9e-08 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 156 2.5e-08 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 162 2.5e-08 1
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 163 2.6e-08 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 158 2.7e-08 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 158 2.8e-08 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 155 2.8e-08 1
UNIPROTKB|Q6PBD6 - symbol:wdr61 "WD repeat-containing pro... 155 2.8e-08 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 165 2.9e-08 1
TAIR|locus:2139489 - symbol:AGB1 "AT4G34460" species:3702... 157 3.0e-08 1
UNIPROTKB|H0Y340 - symbol:RFWD2 "E3 ubiquitin-protein lig... 136 3.3e-08 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 155 3.7e-08 1
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 171 3.9e-08 2
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 171 3.9e-08 2
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 171 3.9e-08 2
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 171 3.9e-08 2
UNIPROTKB|E1BHK9 - symbol:E1BHK9 "Uncharacterized protein... 159 4.2e-08 1
MGI|MGI:1917493 - symbol:Wdr61 "WD repeat domain 61" spec... 153 4.8e-08 1
TAIR|locus:2158232 - symbol:HOS15 "high expression of osm... 167 4.9e-08 2
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 155 6.2e-08 1
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 154 6.6e-08 2
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 152 6.9e-08 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 152 7.0e-08 1
TAIR|locus:2123929 - symbol:VIP3 "AT4G29830" species:3702... 152 7.2e-08 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 155 7.2e-08 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 152 7.4e-08 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 154 7.6e-08 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 155 8.0e-08 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 155 8.1e-08 1
UNIPROTKB|E2RBV0 - symbol:WDR61 "Uncharacterized protein"... 151 8.1e-08 1
RGD|1308228 - symbol:Wdr61 "WD repeat domain 61" species:... 151 8.1e-08 1
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 168 8.2e-08 2
UNIPROTKB|F1RKU4 - symbol:WDR61 "Uncharacterized protein"... 150 8.6e-08 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 156 8.7e-08 1
CGD|CAL0005164 - symbol:SOF1 species:5476 "Candida albica... 154 8.8e-08 1
UNIPROTKB|Q5A7Q9 - symbol:SOF1 "Putative uncharacterized ... 154 8.8e-08 1
TAIR|locus:2027749 - symbol:SMU1 "AT1G73720" species:3702... 160 9.9e-08 2
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 152 1.0e-07 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 156 1.0e-07 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 156 1.0e-07 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 156 1.0e-07 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 156 1.1e-07 1
UNIPROTKB|Q32LN7 - symbol:WDR61 "WD repeat-containing pro... 150 1.1e-07 1
UNIPROTKB|Q9GZS3 - symbol:WDR61 "WD repeat-containing pro... 150 1.1e-07 1
WARNING: Descriptions of 434 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
Identities = 209/448 (46%), Positives = 287/448 (64%)
Query: 101 SARQVANAASPIEHLRLALQQGCEVSVKELDGLLSLL-VAKKRKLEQ-EEAETNMQILLN 158
S ++V N + + + ++Q E + + + LL L +K+K+++ E +T++Q +
Sbjct: 137 SIKEVDNLLTLLAERKRKMEQ--EEAERNMQILLDFLHCLRKQKVDELNEVQTDLQYIKE 194
Query: 159 FLHCLRKQKLE---ELNEIQADLRCIEED-----VYAVEKHKIELYRARGRCLAKLRTFD 210
++ + + +++ + LR + +D + EK++I + + +
Sbjct: 195 DINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPHEKNQIG-FNSNSLSIRGGNFVG 253
Query: 211 DFTASKKTDEKAQISSQGLLMKDACGGPDSPYASQSGLTAARKQRVRAQLNDLKEYYLQK 270
++ +KK + KAQ SS GL KDA G DS +QS ++ ARK+R+ AQ NDL+E YLQK
Sbjct: 254 NYQ-NKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMARKKRIHAQFNDLQECYLQK 312
Query: 271 RRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLRVIAELRHGDLFHAAN 330
RRQ Q + + E D V REGY GL DF+SVL TFT+YSRLRVIAE+RHGD+FH+AN
Sbjct: 313 RRQLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRYSRLRVIAEIRHGDIFHSAN 372
Query: 331 IISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYT 390
I+SSIEFDRDDELFA+AGVSR IK+F+FSSVVNEP D+ P+VEM TRSKLSCLSWNK+
Sbjct: 373 IVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRSKLSCLSWNKHE 432
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD 450
KN IASSDY+GIVT+WDVTT QS+MEYEEHEKRAWSVDFS TEPSMLVSGSDDCKV
Sbjct: 433 KNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKV---- 488
Query: 451 HHIHYYDLRNISQPLHVFNGHKKA-VSYVKFL--SNNELASASTDSSLRLWDVKE-NLPL 506
+ R Q V N KA + VK+ S+N +A S D + +D++ + PL
Sbjct: 489 ---KVWCTR---QEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPL 542
Query: 507 HTFRGHTNEKNFVGLTVNNEYIACGSET 534
H F GH ++V NNE + +++
Sbjct: 543 HVFSGHKKAVSYVKFLSNNELASASTDS 570
Score = 700 (251.5 bits), Expect = 2.6e-130, Sum P(2) = 2.6e-130
Identities = 139/206 (67%), Positives = 161/206 (78%)
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L++ SD D V +W SV+ + + C + + S+ VGSADHH
Sbjct: 479 LVSGSD-DCKVKVWCTRQEASVINID------MKANICCVKYNP--GSSNYIAVGSADHH 529
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTFRGH 512
IHYYDLRNISQPLHVF+GHKKAVSYVKFLSNNELASASTDS+LRLWDVK+NLP+ TFRGH
Sbjct: 530 IHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGH 589
Query: 513 TNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGS-DADHVDDDMGSYFISA 571
TNEKNFVGLTVN+EY+ACGSETNEV+VYHK I++P SHRFGS D D +++ GSYFISA
Sbjct: 590 TNEKNFVGLTVNSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISA 649
Query: 572 VCWKSDSPTMLTANRKGAIKVLVLAA 597
VCWKSDSPTMLTAN +G IKVLVLAA
Sbjct: 650 VCWKSDSPTMLTANSQGTIKVLVLAA 675
Score = 599 (215.9 bits), Expect = 2.6e-130, Sum P(2) = 2.6e-130
Identities = 112/187 (59%), Positives = 140/187 (74%)
Query: 40 LCPICKQLMTDAFMTACGHSFCYTCIFTHLRNKSDCPCCGCHLTCKHIFPXXXXXXXXXX 99
LCPIC Q++ DAF+TACGHSFCY CI THLRNKSDCPCC HLT ++P
Sbjct: 51 LCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKK 110
Query: 100 TSARQVANAASPIEHLRLALQQGCEVSVKELDGLLSLLVAKKRKLEQEEAETNMQILLNF 159
TSAR V+ ASP++ R ALQ+GC+VS+KE+D LL+LL +KRK+EQEEAE NMQILL+F
Sbjct: 111 TSARHVSKTASPLDQFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQILLDF 170
Query: 160 LHCLRKQKLEELNEIQADLRCIEEDVYAVEKHKIELYRARGRCLAKLRTFDDFTASKKT- 218
LHCLRKQK++ELNE+Q DL+ I+ED+ AVE+H+I+LYRAR R KLR D +++
Sbjct: 171 LHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAW 230
Query: 219 -DEKAQI 224
EK QI
Sbjct: 231 PHEKNQI 237
Score = 54 (24.1 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 19/82 (23%), Positives = 35/82 (42%)
Query: 366 RDVHYPMVEMPTRSKLSCLSWNKY-TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRA 424
R++ P+ K +S+ K+ + N +AS+ D + +WDV + V + H
Sbjct: 536 RNISQPLHVFSGHKK--AVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEK 593
Query: 425 WSVDFSCTEPSMLVSGSDDCKV 446
V + L GS+ +V
Sbjct: 594 NFVGLTVNS-EYLACGSETNEV 614
>DICTYBASE|DDB_G0288453 [details] [associations]
symbol:DDB_G0288453 "E3 ubiquitin-protein ligase
RFWD2" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
dictyBase:DDB_G0288453 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 EMBL:AAFI02000111 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 RefSeq:XP_636746.1
ProteinModelPortal:Q54IY4 EnsemblProtists:DDB0219336 GeneID:8626624
KEGG:ddi:DDB_G0288453 InParanoid:Q54IY4 OMA:DINVVER Uniprot:Q54IY4
Length = 970
Score = 517 (187.1 bits), Expect = 1.5e-74, Sum P(3) = 1.5e-74
Identities = 104/206 (50%), Positives = 140/206 (67%)
Query: 394 IASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFS-CTEPSMLVSGSDDCKVGSADHH 452
+AS D V +W TT +++ E + V F+ C+ S L++ GSADHH
Sbjct: 774 LASGSDDTRVKLWSTTTERAITTIES-KANICCVKFNPCS--SNLIA------FGSADHH 824
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTFRGH 512
IHYYDLR PL +F GH+KAVSYVKF++ +E+ SASTDS+L+LW+V +N + TF GH
Sbjct: 825 IHYYDLRQYKDPLLIFKGHRKAVSYVKFMNKDEIISASTDSTLKLWNVNQNDCVRTFTGH 884
Query: 513 TNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDA---DHVDDDMGSYFI 569
+NEKNFVGLTVN +YI CGSE N V+ Y+K +SKP +HRFG+++ + DDD GS F+
Sbjct: 885 SNEKNFVGLTVNGDYICCGSENNGVYTYYKTLSKPIVTHRFGANSGTGEETDDD-GSQFV 943
Query: 570 SAVCWKSDSPTMLTANRKGAIKVLVL 595
S+VCWK DS +L AN +G IK+L L
Sbjct: 944 SSVCWKKDSNILLAANSQGNIKILSL 969
Score = 497 (180.0 bits), Expect = 2.5e-72, Sum P(3) = 2.5e-72
Identities = 106/242 (43%), Positives = 155/242 (64%)
Query: 297 GLEDFRSVLATFTQYSRLRVIAELRHGDLFHAANIISSIEFDRDDELFASAGVSRRIKIF 356
GL F L FT+Y+ +V+A L++GDLF+ ++I+SSIEFDRD+E FA+AGV+++IKIF
Sbjct: 635 GLLSFSRNLLKFTKYNEFKVLATLKYGDLFNTSSIVSSIEFDRDEEYFATAGVTKKIKIF 694
Query: 357 EFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVME 416
EFS + + +VH P+ EM RSK+SCLSWN Y K+ IASSDY+GI+++WD T Q++M
Sbjct: 695 EFSQI-RDNVEVHSPVKEMTCRSKISCLSWNTYIKSQIASSDYEGIISLWDANTGQNIMT 753
Query: 417 YEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKA-V 475
EEHEKR WSVDFS T+P+ L SGSDD +V L + + + KA +
Sbjct: 754 LEEHEKRVWSVDFSRTDPTQLASGSDDTRV----------KLWSTTTERAITTIESKANI 803
Query: 476 SYVKF--LSNNELASASTDSSLRLWDVKENL-PLHTFRGHTNEKNFVGLTVNNEYIACGS 532
VKF S+N +A S D + +D+++ PL F+GH ++V +E I+ +
Sbjct: 804 CCVKFNPCSSNLIAFGSADHHIHYYDLRQYKDPLLIFKGHRKAVSYVKFMNKDEIISAST 863
Query: 533 ET 534
++
Sbjct: 864 DS 865
Score = 250 (93.1 bits), Expect = 1.5e-74, Sum P(3) = 1.5e-74
Identities = 47/153 (30%), Positives = 78/153 (50%)
Query: 40 LCPICKQLMTDAFMTACGHSFCYTCIFTHLRNKSDCPCCGCHLTCKHIFPXXXXXXXXXX 99
LCP+C ++ + F++ CGHSFCY CI HL CP C +LT + IFP
Sbjct: 155 LCPVCNDMIKEPFISKCGHSFCYQCIIIHLSKSKTCPICMVYLTREQIFPNFALNKFVEK 214
Query: 100 TSARQVANAASPIEHLRLALQQGCEVSVKELDGLLSLLVAKKRKLEQEEAETNMQILLNF 159
+ ++ R L +S+ +++ ++S L+ KK+ LE + + ILL+F
Sbjct: 215 IGVKSSLLPTPTVKQFRNTLSNE-NLSLHDINLMVSTLLEKKKNLEVHDQQVEYDILLDF 273
Query: 160 LHCLRKQKLEELNEIQADLRCIEEDVYAVEKHK 192
L R QK+E +++ + +E D+ A+E K
Sbjct: 274 LQKTRSQKMETFKQLKRQISYLENDIKAIEHQK 306
Score = 70 (29.7 bits), Expect = 6.6e-20, Sum P(3) = 6.6e-20
Identities = 25/100 (25%), Positives = 42/100 (42%)
Query: 445 KVGSADHH--IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN--ELASASTDSSLRLWDV 500
++ S+D+ I +D N Q + H+K V V F + +LAS S D+ ++LW
Sbjct: 730 QIASSDYEGIISLWDA-NTGQNIMTLEEHEKRVWSVDFSRTDPTQLASGSDDTRVKLWST 788
Query: 501 KENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
+ T N ++ IA GS + + Y
Sbjct: 789 TTERAITTIESKANICCVKFNPCSSNLIAFGSADHHIHYY 828
Score = 53 (23.7 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 384 LSWNKY-TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
+S+ K+ K+ I S+ D + +W+V + V + H V + V+G
Sbjct: 847 VSYVKFMNKDEIISASTDSTLKLWNVNQNDCVRTFTGHSNEKNFV-------GLTVNGDY 899
Query: 443 DCKVGSADHHIHYYDLRNISQPL--HVFNGH 471
C GS ++ ++ Y + +S+P+ H F +
Sbjct: 900 IC-CGSENNGVYTY-YKTLSKPIVTHRFGAN 928
Score = 42 (19.8 bits), Expect = 1.5e-74, Sum P(3) = 1.5e-74
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 251 ARKQRVRAQLNDLKEYYLQKRRQSTAQS 278
++K+RV L+DL+ Y +S S
Sbjct: 548 SKKRRVEIHLDDLQSCYFSAYNESDYDS 575
Score = 39 (18.8 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 559 HVDDDMGSYFISAVCWKSDSPTMLT 583
H+DD YF + DSPT+++
Sbjct: 556 HLDDLQSCYFSAYNESDYDSPTIIS 580
>UNIPROTKB|E2RRJ5 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 OMA:PICFEMI
CTD:64326 GeneTree:ENSGT00700000104377 EMBL:AAEX03005193
EMBL:AAEX03005194 RefSeq:XP_537181.2 ProteinModelPortal:E2RRJ5
Ensembl:ENSCAFT00000022674 GeneID:480060 KEGG:cfa:480060
Uniprot:E2RRJ5
Length = 733
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 173/532 (32%), Positives = 273/532 (51%)
Query: 40 LCPICKQLMTDAFMTACGHSFCYTCIFTHLRNKSDCPCCGCHL-TCKHIFPXXXXXXXXX 98
+CPIC ++ +A+MT CGHSFCY CI L + + CP C + H++P
Sbjct: 137 VCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELIL 196
Query: 99 XTSAR------QVANAASPIEHLRLALQQ---GCE---VSVKELDGLLSLLVAKKRKLEQ 146
R ++ ++ S R + Q G + + + ++ +L LLV KK++LE
Sbjct: 197 KQKQRFEEKRFKLDHSVSSTNGHRWQILQDLLGTDQDNLDLANVNLMLELLVQKKKQLEA 256
Query: 147 EEAETNMQILLNFLHCLRKQKLEELNEIQADLRCIEEDVYAVEKHKIELYRARGRCLAKL 206
E +QIL+ FL R+ K E+L +IQ +L +EED+ VE+ LY +++
Sbjct: 257 ESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP----VSED 311
Query: 207 RTFDDFTASKKTDEKAQISSQGLLMKDACGGPDSPYASQSGLT-AARKQRVRAQLNDLKE 265
T F A + S++ G + T A+R++R+ A DL++
Sbjct: 312 STVPQFEAPSPSHSNIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQ 371
Query: 266 YYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLRVIAELRHG-D 324
Y ST S D+ SR L++F+ L+ FT+Y+ +R +A L + D
Sbjct: 372 CYF-----STRMSRISDD------SRTASQ--LDEFQECLSKFTRYNSVRPLATLSYASD 418
Query: 325 LFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCL 384
L++ ++I+SSIEFDRD + FA AGV+++IK++E+ +V+ + D+HYP EM SK+SC+
Sbjct: 419 LYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCI 478
Query: 385 SWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDC 444
SW+ Y KNL+ASSDY+G V +WD T Q Y+EHEKR WSVDF+ +P +L SGSDD
Sbjct: 479 SWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDA 538
Query: 445 KVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL--SNNELASASTDSSLRLWDVKE 502
KV + +L N + K V VKF S LA D + +D++
Sbjct: 539 KV-----KLWSTNLDNSVASIEA----KANVCCVKFSPSSRYHLAFGCADHCVHYYDLRN 589
Query: 503 NL-PLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRF 553
P+ F+GH ++ V+ E I S +++ +++ + KP F
Sbjct: 590 TKQPIMVFKGHRKAVSYAKF-VSGEEIVSASTDSQLKLWN--VGKPYCLRSF 638
Score = 437 (158.9 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 96/221 (43%), Positives = 129/221 (58%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
+ +N L+AS D V +W SV E + V FS + L G
Sbjct: 521 VDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA-KANVCCVKFSPSSRYHLAFG--- 576
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKEN 503
C ADH +HYYDLRN QP+ VF GH+KAVSY KF+S E+ SASTDS L+LW+V +
Sbjct: 577 C----ADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKP 632
Query: 504 LPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGS-----DAD 558
L +F+GH NEKNFVGL N +YIACGSE N +++Y+K +SK + +F + D D
Sbjct: 633 YCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKD 692
Query: 559 HVDDDMGSYFISAVCWKS----DSPTMLTANRKGAIKVLVL 595
+DD F+SAVCW++ +S ++ AN +G IKVL L
Sbjct: 693 RKEDDTNE-FVSAVCWRALPDGESNVLIAANSQGTIKVLEL 732
>UNIPROTKB|F1MHX1 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:DAAA02043390 EMBL:DAAA02043391
EMBL:DAAA02043392 IPI:IPI00841834 UniGene:Bt.7449
Ensembl:ENSBTAT00000044452 ArrayExpress:F1MHX1 Uniprot:F1MHX1
Length = 735
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 173/532 (32%), Positives = 273/532 (51%)
Query: 40 LCPICKQLMTDAFMTACGHSFCYTCIFTHLRNKSDCPCCGCHL-TCKHIFPXXXXXXXXX 98
+CPIC ++ +A+MT CGHSFCY CI L + + CP C + H++P
Sbjct: 139 VCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELIL 198
Query: 99 XTSAR------QVANAASPIEHLRLALQQ---GCE---VSVKELDGLLSLLVAKKRKLEQ 146
R ++ ++ S R + Q G + + + ++ +L LLV KK++LE
Sbjct: 199 KQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEA 258
Query: 147 EEAETNMQILLNFLHCLRKQKLEELNEIQADLRCIEEDVYAVEKHKIELYRARGRCLAKL 206
E +QIL+ FL R+ K E+L +IQ +L +EED+ VE+ LY +++
Sbjct: 259 ESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP----VSED 313
Query: 207 RTFDDFTASKKTDEKAQISSQGLLMKDACGGPDSPYASQSGLT-AARKQRVRAQLNDLKE 265
T F A + S++ G + T A+R++R+ A DL++
Sbjct: 314 STVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQ 373
Query: 266 YYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLRVIAELRHG-D 324
Y ST S D+ SR L++F+ L+ FT+Y+ +R +A L + D
Sbjct: 374 CYF-----STRMSRISDD------SRTASQ--LDEFQECLSKFTRYNSVRPLATLSYASD 420
Query: 325 LFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCL 384
L++ ++I+SSIEFDRD + FA AGV+++IK++E+ +V+ + D+HYP EM SK+SC+
Sbjct: 421 LYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCI 480
Query: 385 SWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDC 444
SW+ Y KNL+ASSDY+G V +WD T Q Y+EHEKR WSVDF+ +P +L SGSDD
Sbjct: 481 SWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDA 540
Query: 445 KVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL--SNNELASASTDSSLRLWDVKE 502
KV + +L N + K V VKF S LA D + +D++
Sbjct: 541 KV-----KLWSTNLDNSVASIEA----KANVCCVKFSPSSRYHLAFGCADHCVHYYDLRN 591
Query: 503 NL-PLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRF 553
P+ F+GH ++ V+ E I S +++ +++ + KP F
Sbjct: 592 TKQPIMVFKGHRKAVSYAKF-VSGEEIVSASTDSQLKLWN--VGKPYCLRSF 640
Score = 437 (158.9 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 96/221 (43%), Positives = 129/221 (58%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
+ +N L+AS D V +W SV E + V FS + L G
Sbjct: 523 VDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA-KANVCCVKFSPSSRYHLAFG--- 578
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKEN 503
C ADH +HYYDLRN QP+ VF GH+KAVSY KF+S E+ SASTDS L+LW+V +
Sbjct: 579 C----ADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKP 634
Query: 504 LPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGS-----DAD 558
L +F+GH NEKNFVGL N +YIACGSE N +++Y+K +SK + +F + D D
Sbjct: 635 YCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKD 694
Query: 559 HVDDDMGSYFISAVCWKS----DSPTMLTANRKGAIKVLVL 595
+DD F+SAVCW++ +S ++ AN +G IKVL L
Sbjct: 695 RKEDDTNE-FVSAVCWRALPDGESNVLIAANSQGTIKVLEL 734
>UNIPROTKB|Q8NHY2 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005813
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0006977
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 eggNOG:COG2319 EMBL:CH471067 GO:GO:0005925
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
EMBL:AF508940 EMBL:BK000438 EMBL:AF527539 EMBL:AY509921
EMBL:AK025789 EMBL:AK314750 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 EMBL:BC094728 IPI:IPI00171771
IPI:IPI00184865 IPI:IPI00431955 RefSeq:NP_001001740.1
RefSeq:NP_071902.2 UniGene:Hs.523744 ProteinModelPortal:Q8NHY2
SMR:Q8NHY2 IntAct:Q8NHY2 MINT:MINT-260162 STRING:Q8NHY2
PhosphoSite:Q8NHY2 DMDM:55976539 PaxDb:Q8NHY2 PRIDE:Q8NHY2
DNASU:64326 Ensembl:ENST00000308769 Ensembl:ENST00000367669
GeneID:64326 KEGG:hsa:64326 UCSC:uc001gku.1 UCSC:uc001gkv.1
UCSC:uc009wwv.2 CTD:64326 GeneCards:GC01M175913 HGNC:HGNC:17440
HPA:HPA028197 MIM:608067 neXtProt:NX_Q8NHY2 PharmGKB:PA134952161
HOVERGEN:HBG054995 InParanoid:Q8NHY2 OrthoDB:EOG4M0F18
ChiTaRS:RFWD2 GenomeRNAi:64326 NextBio:66247 ArrayExpress:Q8NHY2
Bgee:Q8NHY2 CleanEx:HS_RFWD2 Genevestigator:Q8NHY2
GermOnline:ENSG00000143207 Uniprot:Q8NHY2
Length = 731
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 173/532 (32%), Positives = 273/532 (51%)
Query: 40 LCPICKQLMTDAFMTACGHSFCYTCIFTHLRNKSDCPCCGCHL-TCKHIFPXXXXXXXXX 98
+CPIC ++ +A+MT CGHSFCY CI L + + CP C + H++P
Sbjct: 135 VCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELIL 194
Query: 99 XTSAR------QVANAASPIEHLRLALQQ---GCE---VSVKELDGLLSLLVAKKRKLEQ 146
R ++ ++ S R + Q G + + + ++ +L LLV KK++LE
Sbjct: 195 KQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQLEA 254
Query: 147 EEAETNMQILLNFLHCLRKQKLEELNEIQADLRCIEEDVYAVEKHKIELYRARGRCLAKL 206
E +QIL+ FL R+ K E+L +IQ +L +EED+ VE+ LY +++
Sbjct: 255 ESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP----VSED 309
Query: 207 RTFDDFTASKKTDEKAQISSQGLLMKDACGGPDSPYASQSGLT-AARKQRVRAQLNDLKE 265
T F A + S++ G + T A+R++R+ A DL++
Sbjct: 310 STVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQ 369
Query: 266 YYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLRVIAELRHG-D 324
Y ST S D+ SR L++F+ L+ FT+Y+ +R +A L + D
Sbjct: 370 CYF-----STRMSRISDD------SRTASQ--LDEFQECLSKFTRYNSVRPLATLSYASD 416
Query: 325 LFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCL 384
L++ ++I+SSIEFDRD + FA AGV+++IK++E+ +V+ + D+HYP EM SK+SC+
Sbjct: 417 LYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCI 476
Query: 385 SWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDC 444
SW+ Y KNL+ASSDY+G V +WD T Q Y+EHEKR WSVDF+ +P +L SGSDD
Sbjct: 477 SWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDA 536
Query: 445 KVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL--SNNELASASTDSSLRLWDVKE 502
KV + +L N + K V VKF S LA D + +D++
Sbjct: 537 KV-----KLWSTNLDNSVASIEA----KANVCCVKFSPSSRYHLAFGCADHCVHYYDLRN 587
Query: 503 NL-PLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRF 553
P+ F+GH ++ V+ E I S +++ +++ + KP F
Sbjct: 588 TKQPIMVFKGHRKAVSYAKF-VSGEEIVSASTDSQLKLWN--VGKPYCLRSF 636
Score = 437 (158.9 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 96/221 (43%), Positives = 129/221 (58%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
+ +N L+AS D V +W SV E + V FS + L G
Sbjct: 519 VDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA-KANVCCVKFSPSSRYHLAFG--- 574
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKEN 503
C ADH +HYYDLRN QP+ VF GH+KAVSY KF+S E+ SASTDS L+LW+V +
Sbjct: 575 C----ADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKP 630
Query: 504 LPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGS-----DAD 558
L +F+GH NEKNFVGL N +YIACGSE N +++Y+K +SK + +F + D D
Sbjct: 631 YCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKD 690
Query: 559 HVDDDMGSYFISAVCWKS----DSPTMLTANRKGAIKVLVL 595
+DD F+SAVCW++ +S ++ AN +G IKVL L
Sbjct: 691 RKEDDTNE-FVSAVCWRALPDGESNVLIAANSQGTIKVLEL 730
>MGI|MGI:1347046 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1347046
Prosite:PS00518 GO:GO:0005737 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0016874 GO:GO:0016607 GO:GO:0008270 eggNOG:COG2319
GO:GO:0005925 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
CTD:64326 HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 ChiTaRS:RFWD2
EMBL:AF151110 EMBL:BC082804 IPI:IPI00621828 RefSeq:NP_036061.1
UniGene:Mm.328135 ProteinModelPortal:Q9R1A8 SMR:Q9R1A8
STRING:Q9R1A8 PhosphoSite:Q9R1A8 PaxDb:Q9R1A8 PRIDE:Q9R1A8
Ensembl:ENSMUST00000076894 GeneID:26374 KEGG:mmu:26374
UCSC:uc007ddz.1 GeneTree:ENSGT00700000104377 InParanoid:Q9R1A8
NextBio:304277 Bgee:Q9R1A8 CleanEx:MM_RFWD2 Genevestigator:Q9R1A8
GermOnline:ENSMUSG00000048949 Uniprot:Q9R1A8
Length = 733
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 173/533 (32%), Positives = 271/533 (50%)
Query: 40 LCPICKQLMTDAFMTACGHSFCYTCIFTHLRNKSDCPCCGCHL-TCKHIFPXXXXXXXXX 98
+CPIC ++ +A+MT CGHSFCY CI L + + CP C + H++P
Sbjct: 137 VCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELIL 196
Query: 99 XTSAR------QVANAASPIEHLRLALQQ---GCE---VSVKELDGLLSLLVAKKRKLEQ 146
R ++ ++ S R + Q G + + + ++ +L LLV KK++LE
Sbjct: 197 KQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEA 256
Query: 147 EEAETNMQILLNFLHCLRKQKLEELNEIQADLRCIEEDVYAVEKHKIELYRARGRCLAKL 206
E +QIL+ FL R+ K E+L +IQ +L +EED+ VE+ LY +++
Sbjct: 257 ESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP----VSED 311
Query: 207 RTFDDFTASKKTDEKAQISSQGLLMKDACGGPDSPYASQ--SGLTAARKQRVRAQLNDLK 264
T F A + I S G + A+R++R+ A DL+
Sbjct: 312 STVPQFEAPSPSHSSI-IDSTEYSQPPGFSGTSQTKKQPWYNSTLASRRKRLTAHFEDLE 370
Query: 265 EYYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLRVIAELRHG- 323
+ Y ST S D+ SR L++F+ L+ FT+Y+ +R +A L +
Sbjct: 371 QCYF-----STRMSRISDD------SRTASQ--LDEFQECLSKFTRYNSVRPLATLSYAS 417
Query: 324 DLFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSC 383
DL++ ++I+SSIEFDRD + FA AGV+++IK++E+ +V+ + D+HYP EM SK+SC
Sbjct: 418 DLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISC 477
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
+SW+ Y KNL+ASSDY+G V +WD T Q Y+EHEKR WSVDF+ +P +L SGSDD
Sbjct: 478 ISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDD 537
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL--SNNELASASTDSSLRLWDVK 501
KV + +L N + K V VKF S LA D + +D++
Sbjct: 538 AKV-----KLWSTNLDNSVASIEA----KANVCCVKFSPSSRYHLAFGCADHCVHYYDLR 588
Query: 502 ENL-PLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRF 553
P+ F+GH ++ V+ E I S +++ +++ + KP F
Sbjct: 589 NTKQPIMVFKGHRKAVSYAKF-VSGEEIVSASTDSQLKLWN--VGKPYCLRSF 638
Score = 437 (158.9 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 96/221 (43%), Positives = 129/221 (58%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
+ +N L+AS D V +W SV E + V FS + L G
Sbjct: 521 VDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA-KANVCCVKFSPSSRYHLAFG--- 576
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKEN 503
C ADH +HYYDLRN QP+ VF GH+KAVSY KF+S E+ SASTDS L+LW+V +
Sbjct: 577 C----ADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKP 632
Query: 504 LPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGS-----DAD 558
L +F+GH NEKNFVGL N +YIACGSE N +++Y+K +SK + +F + D D
Sbjct: 633 YCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKD 692
Query: 559 HVDDDMGSYFISAVCWKS----DSPTMLTANRKGAIKVLVL 595
+DD F+SAVCW++ +S ++ AN +G IKVL L
Sbjct: 693 RKEDDTNE-FVSAVCWRALSDGESNVLIAANSQGTIKVLEL 732
>UNIPROTKB|F1NQ64 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:AADN02034166 IPI:IPI00602963
Ensembl:ENSGALT00000007170 Uniprot:F1NQ64
Length = 717
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 174/541 (32%), Positives = 278/541 (51%)
Query: 40 LCPICKQLMTDAFMTACGHSFCYTCIFTHLRNKSDCPCCGCHL-TCKHIFPXXXXXXXXX 98
+CPIC ++ +A+MT CGHSFCY CI L + + CP C + H++P
Sbjct: 121 VCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELIL 180
Query: 99 XTSAR------QVANAASPIEHLRLALQQ---GCE---VSVKELDGLLSLLVAKKRKLEQ 146
R ++ ++ S R + Q G + + + ++ +L LLV KK++LE
Sbjct: 181 KQKQRSEEKRFKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQLEA 240
Query: 147 EEAETNMQILLNFLHCLRKQKLEELNEIQADLRCIEEDVYAVEKHKIELYRARGRCLAKL 206
E +QIL+ FL R+ K E+L +IQ +L +EED+ VE+ LY +++
Sbjct: 241 ESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP----VSED 295
Query: 207 RTFDDFTASKKTDEKAQISSQGLLMKDACGGPDSPYASQSGLT-AARKQRVRAQLNDLKE 265
T F A + S++ G + T A+R++R+ A DL++
Sbjct: 296 STVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQAKKQPWYNSTLASRRKRLTAHFEDLEQ 355
Query: 266 YYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLRVIAELRHG-D 324
Y ST + D D S+ L++F+ L+ FT+Y+ +R +A L + D
Sbjct: 356 CYF-----STRMTRVSD--DSRTTSQ------LDEFQECLSKFTRYNSVRPLATLSYASD 402
Query: 325 LFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCL 384
L++ ++I+SSIEFDRD + FA AGV+++IK++E+ +V+ + D+HYP EM SK+SC+
Sbjct: 403 LYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCI 462
Query: 385 SWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDC 444
SW+ Y KNL+ASSDY+G V +WD T Q Y+EHEKR WSVDF+ +P +L SGSDD
Sbjct: 463 SWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDA 522
Query: 445 KVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL--SNNELASASTDSSLRLWDVKE 502
KV + +L N + K V VKF S LA D + +D++
Sbjct: 523 KV-----KLWSTNLDNSVASIEA----KANVCCVKFSPSSRYHLAFGCADHCVHYYDLRN 573
Query: 503 NL-PLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDADHVD 561
P+ F+GH ++ V+ E I S +++ +++ + KP H S H++
Sbjct: 574 TKQPIMVFKGHRKAVSYAKF-VSGEEIVSASTDSQLKLWN--VGKP---HCLRSFKGHIN 627
Query: 562 D 562
+
Sbjct: 628 E 628
Score = 407 (148.3 bits), Expect = 6.0e-36, P = 6.0e-36
Identities = 87/198 (43%), Positives = 116/198 (58%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
+ +N L+AS D V +W SV E + V FS + L G
Sbjct: 505 VDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA-KANVCCVKFSPSSRYHLAFG--- 560
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKEN 503
C ADH +HYYDLRN QP+ VF GH+KAVSY KF+S E+ SASTDS L+LW+V +
Sbjct: 561 C----ADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKP 616
Query: 504 LPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGS-----DAD 558
L +F+GH NEKNFVGL N +YIACGSE N +++Y+K +SK + +F + D D
Sbjct: 617 HCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKD 676
Query: 559 HVDDDMGSYFISAVCWKS 576
+DD F+SAVCW++
Sbjct: 677 RKEDDTNE-FVSAVCWRA 693
>ZFIN|ZDB-GENE-070410-134 [details] [associations]
symbol:rfwd2 "ring finger and WD repeat domain 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
ZFIN:ZDB-GENE-070410-134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 CTD:64326
HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 EMBL:BC139708 IPI:IPI00851801
RefSeq:NP_001083011.1 UniGene:Dr.159867 ProteinModelPortal:A4QP94
STRING:A4QP94 GeneID:100037391 KEGG:dre:100037391 NextBio:20788550
Uniprot:A4QP94
Length = 694
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 171/540 (31%), Positives = 268/540 (49%)
Query: 40 LCPICKQLMTDAFMTACGHSFCYTCIFTHLRNKSDCPCCGCHL-TCKHIFPXXXXXXXXX 98
+CPIC +++ +A MT CGHSFCY CI L + + CP C + ++P
Sbjct: 97 VCPICFEMIEEAHMTKCGHSFCYKCIRQSLEDSNRCPKCNYIIDNVDQLYPNFLVNELIL 156
Query: 99 XTSARQVANAASPIEHLRLALQQ------GCE---VSVKELDGLLSLLVAKKRKLEQEEA 149
R +H Q G + + + ++ +L L+ KK++LE E
Sbjct: 157 KQKQRSEEKRLKR-DHPNGTKWQVFQDVLGADQENMDLANVNYILEYLLQKKKQLEAESQ 215
Query: 150 ETNMQILLNFLHCLRKQKLEELNEIQADLRCIEEDVYAVEKHKIELYRARGR--CLAKLR 207
QIL+ FL R+ K E+L ++Q +L +EED+ VE+ +Y C +
Sbjct: 216 AAQRQILMEFLKEARRNKREQLEQLQKELNFLEEDIKRVEEMS-GMYSPISDMDCNSD-S 273
Query: 208 TFDDFTASKKTDEKAQISSQGLLMKDACGGPDSPYASQSGLT-AARKQRVRAQLNDLKEY 266
T A + I + G S + T A+R++R+ A DL++
Sbjct: 274 TVPQVEAPSPAPSSSIIDPSEYIQPPFGGNSQSKRQTWYNSTLASRRKRLTAHFEDLEQC 333
Query: 267 YLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLRVIAELRHG-DL 325
Y R S D D V++ L+DF L+ FT+Y+ +R +A L + DL
Sbjct: 334 YFSNR-----MSRITD--DSRTVNQ------LDDFMECLSKFTRYNSVRPLATLSYASDL 380
Query: 326 FHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLS 385
++ ++I+SSIEFDRD + FA AGV+++IK+FE+ +V+ + D+HYP+ EM SK+SC+S
Sbjct: 381 YNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCIS 440
Query: 386 WNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCK 445
W+ Y KNL+ASSDY+G V +WD T Q Y+EHEKR WSVDF+ +P +L SGSDD K
Sbjct: 441 WSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAK 500
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDVKE- 502
V + +L N + K V VKF S LA D + +D++
Sbjct: 501 V-----KLWSTNLDNSVASIEA----KANVCCVKFSPTSRYHLAFGCADHCVHYYDLRNA 551
Query: 503 NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDADHVDD 562
P+ F+GH ++ VN I S +++ +++ ++KP H S H+++
Sbjct: 552 KQPIMVFKGHRKAVSYAKF-VNGGEIVSASTDSQLKLWN--VNKP---HCLRSFKGHINE 605
Score = 431 (156.8 bits), Expect = 5.1e-40, P = 5.1e-40
Identities = 95/221 (42%), Positives = 128/221 (57%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
+ +N L+AS D V +W SV E + V FS T L G
Sbjct: 482 VDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA-KANVCCVKFSPTSRYHLAFG--- 537
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKEN 503
C ADH +HYYDLRN QP+ VF GH+KAVSY KF++ E+ SASTDS L+LW+V +
Sbjct: 538 C----ADHCVHYYDLRNAKQPIMVFKGHRKAVSYAKFVNGGEIVSASTDSQLKLWNVNKP 593
Query: 504 LPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGS-----DAD 558
L +F+GH NEKNFVGL N +Y+ACGSE N +++Y K +SK + +F + D D
Sbjct: 594 HCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYCKGLSKTLLTFKFDTVKSVLDKD 653
Query: 559 HVDDDMGSYFISAVCWKS----DSPTMLTANRKGAIKVLVL 595
+DD F+SAVCW++ +S ++ AN +G IKVL L
Sbjct: 654 KKEDDTNE-FVSAVCWRALPDGESNVLIAANSQGTIKVLEL 693
>UNIPROTKB|H0Y339 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AL359265 EMBL:AL162736 EMBL:AL513329 EMBL:AL590723
HGNC:HGNC:17440 ChiTaRS:RFWD2 Ensembl:ENST00000367666 Bgee:H0Y339
Uniprot:H0Y339
Length = 566
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 130/415 (31%), Positives = 212/415 (51%)
Query: 145 EQEEAE-TNMQILLNFLHCLRKQKLEELNEIQADLRCIEEDVYAVEKHKIELYRARGRCL 203
+Q+ + N+ ++L L ++K+K E A L+ + E + ++K E +
Sbjct: 84 DQDNLDLANVNLMLELL--VQKKKQLEAESHAAQLQILMEFLKVARRNKREEMSGLYSPV 141
Query: 204 AKLRTFDDFTASKKTDEKAQISSQGLLMKDACGGPDSPYASQSGLT-AARKQRVRAQLND 262
++ T F A + S++ G + T A+R++R+ A D
Sbjct: 142 SEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFED 201
Query: 263 LKEYYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLRVIAELRH 322
L++ Y ST S D+ SR L++F+ L+ FT+Y+ +R +A L +
Sbjct: 202 LEQCYF-----STRMSRISDD------SRTASQ--LDEFQECLSKFTRYNSVRPLATLSY 248
Query: 323 G-DLFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKL 381
DL++ ++I+SSIEFDRD + FA AGV+++IK++E+ +V+ + D+HYP EM SK+
Sbjct: 249 ASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKI 308
Query: 382 SCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGS 441
SC+SW+ Y KNL+ASSDY+G V +WD T Q Y+EHEKR WSVDF+ +P +L SGS
Sbjct: 309 SCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGS 368
Query: 442 DDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL--SNNELASASTDSSLRLWD 499
DD KV + +L N + K V VKF S LA D + +D
Sbjct: 369 DDAKV-----KLWSTNLDNSVASIEA----KANVCCVKFSPSSRYHLAFGCADHCVHYYD 419
Query: 500 VKENL-PLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRF 553
++ P+ F+GH ++ V+ E I S +++ +++ + KP F
Sbjct: 420 LRNTKQPIMVFKGHRKAVSYAKF-VSGEEIVSASTDSQLKLWN--VGKPYCLRSF 471
Score = 437 (158.9 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 96/221 (43%), Positives = 129/221 (58%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
+ +N L+AS D V +W SV E + V FS + L G
Sbjct: 354 VDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA-KANVCCVKFSPSSRYHLAFG--- 409
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKEN 503
C ADH +HYYDLRN QP+ VF GH+KAVSY KF+S E+ SASTDS L+LW+V +
Sbjct: 410 C----ADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKP 465
Query: 504 LPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGS-----DAD 558
L +F+GH NEKNFVGL N +YIACGSE N +++Y+K +SK + +F + D D
Sbjct: 466 YCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKD 525
Query: 559 HVDDDMGSYFISAVCWKS----DSPTMLTANRKGAIKVLVL 595
+DD F+SAVCW++ +S ++ AN +G IKVL L
Sbjct: 526 RKEDDTNE-FVSAVCWRALPDGESNVLIAANSQGTIKVLEL 565
Score = 151 (58.2 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 51 AFMTACGHSFCYTCIFTHLRNKSDCPCCGCHL-TCKHIFPXXXXXXXXXXTSAR------ 103
A+MT CGHSFCY CI L + + CP C + H++P R
Sbjct: 1 AYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRF 60
Query: 104 QVANAASPIEHLRLALQQ---GCE---VSVKELDGLLSLLVAKKRKLEQEEAETNMQILL 157
++ ++ S R + Q G + + + ++ +L LLV KK++LE E +QIL+
Sbjct: 61 KLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILM 120
Query: 158 NFLHCLRKQKLEELN 172
FL R+ K EE++
Sbjct: 121 EFLKVARRNKREEMS 135
>TAIR|locus:2039139 [details] [associations]
symbol:SPA1 "SUPPRESSOR OF PHYA-105 1" species:3702
"Arabidopsis thaliana" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048575 "short-day photoperiodism, flowering"
evidence=IMP] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA;IMP] [GO:2000028 "regulation of
photoperiodism, flowering" evidence=IMP] [GO:0010017 "red or
far-red light signaling pathway" evidence=IMP] [GO:0010114
"response to red light" evidence=IEP] [GO:0010218 "response to far
red light" evidence=IEP] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0048608 "reproductive
structure development" evidence=RCA] [GO:0009585 "red, far-red
light phototransduction" evidence=IGI] InterPro:IPR017986
InterPro:IPR000719 InterPro:IPR001680 InterPro:IPR011009
InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400 PROSITE:PS00107
PROSITE:PS50011 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0009640 GO:GO:0010218
GO:GO:0010114 GO:GO:0009658 GO:GO:0004672 GO:GO:0009585
EMBL:AC006526 HSSP:P16649 GO:GO:0080008 GO:GO:0010100 GO:GO:0048575
EMBL:AF135455 EMBL:AK227186 EMBL:AK221994 IPI:IPI00541649
PIR:F84901 PIR:G84901 RefSeq:NP_182157.2 UniGene:At.11156
ProteinModelPortal:Q9SYX2 SMR:Q9SYX2 IntAct:Q9SYX2 MINT:MINT-276478
STRING:Q9SYX2 PaxDb:Q9SYX2 PRIDE:Q9SYX2 EnsemblPlants:AT2G46340.1
GeneID:819242 KEGG:ath:AT2G46340 GeneFarm:2885 TAIR:At2g46340
HOGENOM:HOG000029775 InParanoid:Q9SYX2 KO:K16240 OMA:LKSELIC
PhylomeDB:Q9SYX2 ProtClustDB:CLSN2918282 Genevestigator:Q9SYX2
GO:GO:2000028 Uniprot:Q9SYX2
Length = 1029
Score = 507 (183.5 bits), Expect = 1.4e-47, P = 1.4e-47
Identities = 138/420 (32%), Positives = 220/420 (52%)
Query: 131 DGLLSLLVAKKRKLEQEEA-ETNMQILLNFLHCLRKQKLEELNEIQADLRCIEEDVYAVE 189
D L S L+ + ++ A E ++LL+FL L QK ++ +++ D++ +E+D+ E
Sbjct: 522 DILKSELICEDDSVKSTAAAEEISELLLHFLSSLEVQKKKKASKLLQDIQTLEDDIKEAE 581
Query: 190 KH---KIELYRARGRCLAKLRTFDDFTASKKTDEKAQISSQGLLMKDACGGPDSPYASQS 246
+ + L R+ G +++ S DE SS L + A D ++
Sbjct: 582 RRYSSNVSLVRSHGAIEKRVQ-------SSPLDEHCTTSS-ALFVPTA--NTDRLMSNIR 631
Query: 247 GLTAARKQRVRAQLNDLKEYYLQKRRQSTAQSH---KEDEGDLYAVSREGYHPG-LEDFR 302
L A +R+Q+N L R T + E++ + +S +G LE F
Sbjct: 632 QLEDAYFF-MRSQIN-LSSSAATARSDKTLKDRDRCSENQNENQDMSTKGKSSDQLEVFF 689
Query: 303 SVLATFTQYSRLRVIAELRHGDLFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVV 362
L F +YS+ +R GDL ++A+++ S+ FD D+E A+AG+S++IKIF+F++ +
Sbjct: 690 EGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAAAGISKKIKIFDFNAFM 749
Query: 363 NEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEK 422
NE VHYP+VEM +SKLSC+ WN Y KN +AS+DYDG+V IWD T Q +Y EH+K
Sbjct: 750 NESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDGVVQIWDAGTGQGFSQYTEHQK 809
Query: 423 RAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLS 482
RAWSVDFS ++P+ VSGSDDC V + L I P +V V + + S
Sbjct: 810 RAWSVDFSPSDPTKFVSGSDDCSVKLWSIN-EKRSLGTIWSPANVC-----CVQFSSY-S 862
Query: 483 NNELASASTDSSLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYH 541
N+ LA S D + +D++ P T GH ++V +++E I S N + +++
Sbjct: 863 NHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKF-MDSETIVSASTDNSLKLWN 921
Score = 361 (132.1 bits), Expect = 5.6e-30, P = 5.6e-30
Identities = 88/219 (40%), Positives = 128/219 (58%)
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWS-VDFSCTEPSMLVSGSDDCKVGS 448
TK ++ SD D V +W + +S+ WS + C + S + GS
Sbjct: 822 TK-FVSGSD-DCSVKLWSINEKRSL-------GTIWSPANVCCVQFSSY--SNHLLAFGS 870
Query: 449 ADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDV-KENLP-L 506
AD+ ++ YDLR + P GH+KAVSYVKF+ + + SASTD+SL+LW++ K N L
Sbjct: 871 ADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFMDSETIVSASTDNSLKLWNLNKTNSSGL 930
Query: 507 H------TFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGS----D 556
T++GHTN+KNFVGL+V + YIACGSETNEV+ Y+K++ P S++FGS
Sbjct: 931 SPGACSLTYKGHTNQKNFVGLSVLDGYIACGSETNEVYSYYKSLPMPMTSYKFGSVDPIS 990
Query: 557 ADHVDDDMGSYFISAVCWKSDSPTMLTANRKGAIKVLVL 595
+ DD G F+S+VCW+ S ++ AN G +K+L L
Sbjct: 991 GNEYFDDNGQ-FVSSVCWRKKSNMLVAANSTGNMKLLKL 1028
>RGD|1304773 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1304773 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 KO:K10143 CTD:64326 HOVERGEN:HBG054995 EMBL:BC091284
IPI:IPI00363852 RefSeq:NP_001020297.1 UniGene:Rn.8617
ProteinModelPortal:Q5BJY0 PhosphoSite:Q5BJY0 GeneID:360860
KEGG:rno:360860 NextBio:674404 Genevestigator:Q5BJY0 Uniprot:Q5BJY0
Length = 433
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 112/308 (36%), Positives = 173/308 (56%)
Query: 250 AARKQRVRAQLNDLKEYYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFT 309
A+R++R+ A DL++ Y ST S D+ SR L++F+ L+ FT
Sbjct: 56 ASRRKRLTAHFEDLEQCYF-----STRMSRISDD------SRTASQ--LDEFQECLSKFT 102
Query: 310 QYSRLRVIAELRHG-DLFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDV 368
+Y+ +R +A L + DL++ ++I+SSIEFDRD + FA AGV+++IK++E+ +V+ + D+
Sbjct: 103 RYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDI 162
Query: 369 HYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVD 428
HYP EM SK+SC+SW+ Y KNL+ASSDY+G V +WD T Q Y+EHEKR WSVD
Sbjct: 163 HYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVD 222
Query: 429 FSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL--SNNEL 486
F+ +P +L SGSDD KV + +L N + K V VKF S L
Sbjct: 223 FNLMDPKLLASGSDDAKV-----KLWSTNLDNSVASIEA----KANVCCVKFSPSSRYHL 273
Query: 487 ASASTDSSLRLWDVKENL-PLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAIS 545
A D + +D++ P+ F+GH ++ V+ E I S +++ +++ +
Sbjct: 274 AFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKF-VSGEEIVSASTDSQLKLWN--VG 330
Query: 546 KPAASHRF 553
KP F
Sbjct: 331 KPYCLRSF 338
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 96/221 (43%), Positives = 129/221 (58%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
+ +N L+AS D V +W SV E + V FS + L G
Sbjct: 221 VDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA-KANVCCVKFSPSSRYHLAFG--- 276
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKEN 503
C ADH +HYYDLRN QP+ VF GH+KAVSY KF+S E+ SASTDS L+LW+V +
Sbjct: 277 C----ADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKP 332
Query: 504 LPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGS-----DAD 558
L +F+GH NEKNFVGL N +YIACGSE N +++Y+K +SK + +F + D D
Sbjct: 333 YCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKD 392
Query: 559 HVDDDMGSYFISAVCWKS----DSPTMLTANRKGAIKVLVL 595
+DD F+SAVCW++ +S ++ AN +G IKVL L
Sbjct: 393 RKEDDTNE-FVSAVCWRALSDGESNVLIAANSQGTIKVLEL 432
>TAIR|locus:2136133 [details] [associations]
symbol:SPA2 "SPA1-related 2" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR017986 InterPro:IPR000719 InterPro:IPR001680
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400
PROSITE:PS50011 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161531 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004672 GO:GO:0009585
GO:GO:0080008 EMBL:AF080120 EMBL:AL049876 HOGENOM:HOG000029775
EMBL:AK229182 IPI:IPI00538672 PIR:T01922 PIR:T01923 PIR:T08190
RefSeq:NP_192849.4 UniGene:At.46392 ProteinModelPortal:Q9T014
SMR:Q9T014 IntAct:Q9T014 STRING:Q9T014 PRIDE:Q9T014
EnsemblPlants:AT4G11110.1 GeneID:826712 KEGG:ath:AT4G11110
GeneFarm:3132 TAIR:At4g11110 InParanoid:Q0WP97 OMA:FGGHTNE
PhylomeDB:Q9T014 ProtClustDB:CLSN2920287 Genevestigator:Q9T014
Uniprot:Q9T014
Length = 1036
Score = 447 (162.4 bits), Expect = 2.8e-44, Sum P(2) = 2.8e-44
Identities = 104/261 (39%), Positives = 151/261 (57%)
Query: 305 LATFTQYSRLRVIAELRHGDLFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNE 364
L + +YS+ LR +L + +N+I S+ FDRD++ FA+AGVS++IKI+EF+S+ NE
Sbjct: 699 LCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNE 758
Query: 365 PRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRA 424
D+HYP +EMP RSKLS + WN Y +N +ASSDYDGIV +WDVTT Q++ + EHEKRA
Sbjct: 759 SVDIHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRA 818
Query: 425 WSVDFSCTEPSMLVSGSDDC--KVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL- 481
WSVDFS P+ L SGSDDC K+ + + +RNI+ V V+F
Sbjct: 819 WSVDFSEACPTKLASGSDDCSVKLWNINERNCLGTIRNIAN-----------VCCVQFSP 867
Query: 482 -SNNELASASTDSSLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFV 539
S++ LA S+D +D++ P GH ++ ++NE + S N + +
Sbjct: 868 QSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKF-LDNETLVTASTDNTLKL 926
Query: 540 Y------HKAISKPAASHRFG 554
+ H +S A S FG
Sbjct: 927 WDLKKTTHGGLSTNACSLTFG 947
Score = 384 (140.2 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 86/214 (40%), Positives = 129/214 (60%)
Query: 394 IASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHI 453
+AS D V +W++ ++ + + V FS + S L++ GS+D
Sbjct: 831 LASGSDDCSVKLWNIN-ERNCLGTIRNIANVCCVQFS-PQSSHLLA------FGSSDFRT 882
Query: 454 HYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKE--------NLP 505
+ YDLRN+ P + +GH KAVSY KFL N L +ASTD++L+LWD+K+ N
Sbjct: 883 YCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTASTDNTLKLWDLKKTTHGGLSTNAC 942
Query: 506 LHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGS----DADHVD 561
TF GHTNEKNFVGL+ ++ YIACGSETNEV+ YH+++ P S++FGS ++
Sbjct: 943 SLTFGGHTNEKNFVGLSTSDGYIACGSETNEVYAYHRSLPMPITSYKFGSIDPISGKEIE 1002
Query: 562 DDMGSYFISAVCWKSDSPTMLTANRKGAIKVLVL 595
+D + F+S+VCW+ S +++A+ G+IKVL L
Sbjct: 1003 ED-NNLFVSSVCWRKRSNMVVSASSNGSIKVLQL 1035
Score = 57 (25.1 bits), Expect = 2.8e-44, Sum P(2) = 2.8e-44
Identities = 11/56 (19%), Positives = 29/56 (51%)
Query: 137 LVAKKRKLEQEEAETNMQILLNFLHCLRKQKLEELNEIQADLRCIEEDVYAVEKHK 192
L A+ L E+ +T ++L +FL ++++ + + ++ +E D+ + K +
Sbjct: 556 LYAEGLSLSIEQEDTESELLQHFLFLSQEKRQKHAGNLMEEIASVEADIEEIVKRR 611
>TAIR|locus:2037005 [details] [associations]
symbol:SPA4 "SPA1-related 4" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0006281
"DNA repair" evidence=RCA] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA] [GO:0048608 "reproductive
structure development" evidence=RCA] InterPro:IPR017986
InterPro:IPR000719 InterPro:IPR001680 InterPro:IPR011009
InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400 PROSITE:PS50011
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004672 GO:GO:0009585
EMBL:AC022520 GO:GO:0080008 HOGENOM:HOG000029775 EMBL:AY040023
EMBL:AY133883 IPI:IPI00544468 PIR:E96571 RefSeq:NP_175717.1
RefSeq:NP_849802.1 UniGene:At.21898 ProteinModelPortal:Q94BM7
SMR:Q94BM7 IntAct:Q94BM7 STRING:Q94BM7 PaxDb:Q94BM7 PRIDE:Q94BM7
EnsemblPlants:AT1G53090.1 EnsemblPlants:AT1G53090.2 GeneID:841743
KEGG:ath:AT1G53090 GeneFarm:2950 TAIR:At1g53090 InParanoid:Q94BM7
OMA:WSINQGV PhylomeDB:Q94BM7 ProtClustDB:PLN00181
Genevestigator:Q94BM7 Uniprot:Q94BM7
Length = 794
Score = 463 (168.0 bits), Expect = 3.2e-43, P = 3.2e-43
Identities = 111/306 (36%), Positives = 176/306 (57%)
Query: 250 AARKQRVRAQL---NDLKEYYLQ---KRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRS 303
A R ++++A L YY R S S + D SR+G ++ F
Sbjct: 401 ATRYRQIKAATAAEKPLARYYSALSCNGRSSEKSSMSQPSKDPINDSRQG--GWIDPFLE 458
Query: 304 VLATFTQYSRLRVIAELRHGDLFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVN 363
L + +S+LRV A+L+ GDL +++N++ +I FDRD E FA+AGV+++IKIFE S++
Sbjct: 459 GLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIK 518
Query: 364 EPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKR 423
+ RD+HYP+VE+ +RSKLS + WN Y K+ +ASS+++G+V +WDV +Q V E +EHEKR
Sbjct: 519 DGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKR 578
Query: 424 AWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKA-VSYVKFLS 482
WS+D+S +P++L SGSDD GS L +I+Q + + KA + V+F S
Sbjct: 579 VWSIDYSSADPTLLASGSDD---GSVK-------LWSINQGVSIGTIKTKANICCVQFPS 628
Query: 483 NN--ELASASTDSSLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFV 539
LA S D + +D++ LPL T GH ++V V++ + S N + +
Sbjct: 629 ETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKL 687
Query: 540 YHKAIS 545
+ ++S
Sbjct: 688 WDLSMS 693
Score = 425 (154.7 bits), Expect = 3.5e-43, Sum P(2) = 3.5e-43
Identities = 96/232 (41%), Positives = 136/232 (58%)
Query: 372 MVEMPTRSK-LSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFS 430
+ EM K + + ++ L+AS DG V +W + S+ + +
Sbjct: 569 VTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT------KANIC 622
Query: 431 CTE-PSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASA 489
C + PS +G GSADH ++YYDLRN PL GH K VSYV+F+ ++ L S+
Sbjct: 623 CVQFPSE--TGRS-LAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVSS 679
Query: 490 STDSSLRLWDVKENL------PLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKA 543
STD++L+LWD+ ++ PLH+F GHTN KNFVGL+V++ YIA GSETNEVFVYHKA
Sbjct: 680 STDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKA 739
Query: 544 ISKPAASHRFGS-D-ADHVDDDMGSYFISAVCWKSDSPTMLTANRKGAIKVL 593
P S++F + D ++ D S FIS+VCW+ S T++ AN G IK+L
Sbjct: 740 FPMPVLSYKFKTIDPVSELEVDDASQFISSVCWRGQSSTLVAANSTGNIKIL 791
Score = 63 (27.2 bits), Expect = 3.5e-43, Sum P(2) = 3.5e-43
Identities = 30/144 (20%), Positives = 56/144 (38%)
Query: 179 RCIEEDVYAVEKHKIELYRARGRCLAKLRTFDDFTASKKTDEKAQISSQGLLMKDACGGP 238
R I E V A I ++ R C + +F++ + + S + K G
Sbjct: 87 RQIVEIVNAAHSQGIVVHNVRPSCFV-MSSFNNVSFIESASCSDSGSDEDATTKSREIGS 145
Query: 239 DSPYASQSGLTAARKQRVRAQLNDLKEYYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGL 298
S + +++ V+ Q +K+ + T SH+ED G L + + Y G+
Sbjct: 146 SRQEEILSERRSKQQEEVKKQPFPMKQILAMEMSWYT--SHEEDNGSLCNCASDIYRLGV 203
Query: 299 EDFRSVLATFTQYSRLRVIAELRH 322
F ++ + R ++ LRH
Sbjct: 204 LLFELFCPVSSREEKSRTMSSLRH 227
>TAIR|locus:2172883 [details] [associations]
symbol:RUP2 "AT5G23730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0010224 "response to UV-B"
evidence=IGI] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0043496 "regulation of protein homodimerization activity"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:AB005244 GO:GO:0009658 GO:GO:0010224
HSSP:P16649 KO:K10143 GO:GO:0080008 ProtClustDB:CLSN2687591
EMBL:AY039941 EMBL:BT015119 IPI:IPI00518125 RefSeq:NP_568435.2
UniGene:At.8740 ProteinModelPortal:Q9FFA7 SMR:Q9FFA7 PRIDE:Q9FFA7
EnsemblPlants:AT5G23730.1 GeneID:832438 KEGG:ath:AT5G23730
TAIR:At5g23730 HOGENOM:HOG000238730 InParanoid:Q9FFA7 OMA:QATACEY
PhylomeDB:Q9FFA7 Genevestigator:Q9FFA7 Uniprot:Q9FFA7
Length = 368
Score = 280 (103.6 bits), Expect = 9.2e-24, P = 9.2e-24
Identities = 68/205 (33%), Positives = 92/205 (44%)
Query: 395 ASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIH 454
AS DG + +WD C E SG VG AD +
Sbjct: 163 ASGSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFDP--SGGPAVAVGCADRKGY 220
Query: 455 YYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTFRGHTN 514
YD+R + P GH K VSYV+FL + +A TD L+LW V++ + T+ GH N
Sbjct: 221 VYDIRKLVDPALTLQGHTKTVSYVRFLDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVN 280
Query: 515 EKNFVGLTV--NNEYIACGSETNEVFVYHKAISKPAASHRFGSDADHVDDDMGSYFISAV 572
+NFVGL+V N CGSE N VFVY + KP F + D F+S+V
Sbjct: 281 NRNFVGLSVWRNGALFGCGSENNRVFVYDRRWGKPVWVDGFEPVGMNSGSD--KRFVSSV 338
Query: 573 CWKS---DSPTMLTANRKGAIKVLV 594
CW+ D T++ G ++V V
Sbjct: 339 CWRQSGVDQCTLVAGGSDGVLQVYV 363
Score = 183 (69.5 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 61/223 (27%), Positives = 106/223 (47%)
Query: 328 AANIISSIEFDRDDELFASAGVSRRIKIFEFSSVV--NEPRDVHYPMVEMPTR------- 378
A+++I +IEFD D + A+AG+SR+I+ + S++ N V+ T
Sbjct: 39 ASDVIGAIEFDPTDNIVATAGISRKIRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICT 98
Query: 379 -SKLSCLSWNKYTKN-LIASSDYDGIVTIWDVTTSQSVMEYEEHE-KRAWSVDFSCTEPS 435
+KLS L W + +I S DYDG+V +D+ V E +EH +R WSVD++ +
Sbjct: 99 PAKLSSLRWRPGSGGRVIGSGDYDGVVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGA 158
Query: 436 MLV--SGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN--ELASAST 491
V SGSDD + D + + +P + + AV V+F + +A
Sbjct: 159 STVGASGSDDGTMQVWDPRCPPEESVGVVRPAGIC---RSAVCCVEFDPSGGPAVAVGCA 215
Query: 492 DSSLRLWDVKENL-PLHTFRGHTNEKNFVGLTVNNEYIACGSE 533
D ++D+++ + P T +GHT ++V + G++
Sbjct: 216 DRKGYVYDIRKLVDPALTLQGHTKTVSYVRFLDGGTVVTAGTD 258
>TAIR|locus:2145111 [details] [associations]
symbol:RUP1 "AT5G52250" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0010224 "response to
UV-B" evidence=IEP;IGI;RCA] [GO:0010114 "response to red light"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009813 "flavonoid biosynthetic process" evidence=RCA]
[GO:0043496 "regulation of protein homodimerization activity"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0010218 GO:GO:0010114 GO:GO:0010224
HSSP:P16649 KO:K10143 GO:GO:0080008 EMBL:AB025603 EMBL:BT003150
EMBL:AK228112 EMBL:AY087205 IPI:IPI00517585 RefSeq:NP_200038.1
UniGene:At.29626 ProteinModelPortal:Q9LTJ6 SMR:Q9LTJ6 STRING:Q9LTJ6
EnsemblPlants:AT5G52250.1 GeneID:835301 KEGG:ath:AT5G52250
TAIR:At5g52250 InParanoid:Q9LTJ6 OMA:VVTEYDV PhylomeDB:Q9LTJ6
ProtClustDB:CLSN2687591 Genevestigator:Q9LTJ6 Uniprot:Q9LTJ6
Length = 385
Score = 273 (101.2 bits), Expect = 7.4e-22, P = 7.4e-22
Identities = 82/255 (32%), Positives = 125/255 (49%)
Query: 357 EFSSVVNEPRDVH--YPMVEMPTRS--KLSCLSWNKYTKNLI-ASSDYDGIVTIWDVTTS 411
++ VV E DV P+ E ++ + + Y +LI AS DG V +WD
Sbjct: 142 DYDGVVTE-YDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSDDGTVQMWDPRNG 200
Query: 412 QSVMEYEEHEKRA--WSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFN 469
++ E A SV+F +P G VG AD + + YD+R + PL V +
Sbjct: 201 GTLEETVRPGGGAAICSVEF---DPF----GGSSIAVGCADRNAYVYDIRRLVDPLIVLD 253
Query: 470 GHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPL-HTFRGHTNEKNFVGLTV--NNE 526
GH K V+Y +F+ ++ + + STD SL+ WD+ + T+RGH N +NFVGL+V +
Sbjct: 254 GHTKTVTYARFMDSHTIVTGSTDGSLKQWDIDNGRRVVRTYRGHVNSRNFVGLSVWRHGG 313
Query: 527 YIACGSETNEVFVYHKAISKPA----ASH--RFGSDADHVDDDMGSYFISAVCWKS---D 577
+ GSE N+VFVY K +P H RFGSD F+S+VC + D
Sbjct: 314 LVVSGSENNQVFVYDKRWEEPVWVCGLGHTNRFGSDRR---------FVSSVCLRQVDED 364
Query: 578 SPTMLTANRKGAIKV 592
T++ GA+++
Sbjct: 365 WCTLVAGGSDGALEI 379
Score = 225 (84.3 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 69/214 (32%), Positives = 111/214 (51%)
Query: 329 ANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVE--MPTRSKLSCLSW 386
++ I +IEFD E+ A+ G++R+I+ + SS++ E RD H E + T +KLS L W
Sbjct: 71 SDAIGAIEFDPTGEIIATGGIARKIRSYRLSSLL-ESRDDHVTASESYICTPAKLSSLKW 129
Query: 387 NK-YTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHE-KRAWSVDFSCTEPSML-VSGSDD 443
++ +I S DYDG+VT +DV V E +EH +R WSVD++ S++ SGSDD
Sbjct: 130 RPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSDD 189
Query: 444 CKVGSADHHIHYYDLRNISQPLH--VFNGHKKAVSYVKF--LSNNELASASTDSSLRLWD 499
G+ + +D RN L V G A+ V+F + +A D + ++D
Sbjct: 190 ---GT----VQMWDPRN-GGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNAYVYD 241
Query: 500 VKENL-PLHTFRGHTNEKNFVGLTVNNEYIACGS 532
++ + PL GHT + +++ I GS
Sbjct: 242 IRRLVDPLIVLDGHTKTVTYARF-MDSHTIVTGS 274
>UNIPROTKB|F1S705 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104377
EMBL:CU638728 EMBL:CU855662 Ensembl:ENSSSCT00000016896
Uniprot:F1S705
Length = 425
Score = 277 (102.6 bits), Expect = 9.5e-22, P = 9.5e-22
Identities = 87/309 (28%), Positives = 148/309 (47%)
Query: 40 LCPICKQLMTDAFMTACGHSFCYTCIFTHLRNKSDCPCCGCHL-TCKHIFPXXXXXXXXX 98
+CPIC ++ +A+MT CGHSFCY CI L + + CP C + H++P
Sbjct: 134 VCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELIL 193
Query: 99 XTSAR------QVANAASPIEHLRLALQQ---GCE---VSVKELDGLLSLLVAKKRKLEQ 146
R ++ ++ S R + Q G + + + ++ +L LLV KK++LE
Sbjct: 194 KQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEA 253
Query: 147 EEAETNMQILLNFLHCLRKQKLEELNEIQADLRCIEEDVYAVEKHKIELYRARGRCLAKL 206
E +QIL+ FL R+ K E+L +IQ +L +EED+ VE+ LY +++
Sbjct: 254 ESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS-GLYSP----VSED 308
Query: 207 RTFDDFTASKKTDEKAQISSQGLLMKDACGGPDSPYASQSGLT-AARKQRVRAQLNDLKE 265
T F A + S++ + G + T A+R++R+ A DL++
Sbjct: 309 STVPQFEAPSPSHSSIIDSTEYIQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQ 368
Query: 266 YYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLRVIAELRHG-D 324
Y ST S D+ SR L++F+ L+ FT+Y+ +R +A L + D
Sbjct: 369 CYF-----STRMSRISDD------SRTASQ--LDEFQECLSKFTRYNSVRPLATLSYASD 415
Query: 325 LFHAANIIS 333
L++ ++I+S
Sbjct: 416 LYNGSSIVS 424
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 190 (71.9 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 71/231 (30%), Positives = 109/231 (47%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK--LSCLSWNKY 389
IS I + +D +L SA + IKI++ S MV+ K + +S+N
Sbjct: 91 ISDIAWSQDSKLICSASDDKTIKIWDVESG---------KMVKTLKGHKEYVFGVSFNPQ 141
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSA 449
+ NLI S +D V IWDV T + H V F+ + +++VSGS D G+
Sbjct: 142 S-NLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFN-RDGTLVVSGSYD---GT- 195
Query: 450 DHHIHYYDLRNISQPLHVFNGHK-KAVSYVKFLSNNELASAST-DSSLRLWDVKENLP-L 506
+ +D Q L+ + K VS+VKF N + A T D++LRLW N L
Sbjct: 196 ---VRIWDTTT-GQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCL 251
Query: 507 HTFRGHTNEKNFVGLTVN---NEYIACGSETNEVFVYH---KAISKPAASH 551
T+ GH NEK + T + ++I GSE N +++Y+ + I + A H
Sbjct: 252 KTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGH 302
Score = 139 (54.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 47/208 (22%), Positives = 97/208 (46%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIF-EFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYT 390
ISS++F D + ASA + IKI+ + + H + +S ++W++ +
Sbjct: 49 ISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGH--------KEGISDIAWSQDS 100
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD 450
K + ++SD D + IWDV + + V + H++ + V F+ + +++VSGS D
Sbjct: 101 KLICSASD-DKTIKIWDVESGKMVKTLKGHKEYVFGVSFN-PQSNLIVSGS-------FD 151
Query: 451 HHIHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHT 508
++ +D+ ++ + + V + + + S S D ++R+WD L+T
Sbjct: 152 ENVRIWDVNTGECTKMISAHSDPVTGVHFNR--DGTLVVSGSYDGTVRIWDTTTGQLLNT 209
Query: 509 FRGHTN-EKNFVGLTVNNEYIACGSETN 535
E +FV + N +++ G+ N
Sbjct: 210 ISTEDGKEVSFVKFSPNGKFVLAGTLDN 237
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 187 (70.9 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 53/165 (32%), Positives = 85/165 (51%)
Query: 383 CLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
C +N NLI S +D V IW+V T + + H +V+F+C S++VSGS
Sbjct: 128 CCDFNP-PSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNG-SLIVSGSY 185
Query: 443 D--CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWD 499
D C++ A LR ++ G+ VS+VKF N + + +A+ D++L+LWD
Sbjct: 186 DGLCRIWDAASG---QCLRTLAD-----EGNPP-VSFVKFSPNGKYILTATLDNTLKLWD 236
Query: 500 VKENLPLHTFRGHTNEKN--FVGLTVNN-EYIACGSETNEVFVYH 541
L T+ GH NEK F +V +++ GSE N V++++
Sbjct: 237 YSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWN 281
Score = 125 (49.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 46/172 (26%), Positives = 74/172 (43%)
Query: 364 EPRDVHYPMVEMPTRSKLSCLSWNKYTKN--LIASSDYDGIVTIWDVTTSQSVMEYEEHE 421
EP+ +Y + + + +S K++ N +ASS D ++ IW H
Sbjct: 23 EPQKPNYAL-RLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHS 81
Query: 422 KRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL 481
V +S ++ S LVS SDD K + +D+R+ + L GH V F
Sbjct: 82 LEISDVAWS-SDSSRLVSASDD-KT------LKVWDMRS-GKCLKTLKGHSDFVFCCDFN 132
Query: 482 S-NNELASASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGS 532
+N + S S D S+++W+VK L T H++ + V N I GS
Sbjct: 133 PPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGS 184
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 183 (69.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 64/218 (29%), Positives = 105/218 (48%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYT 390
IS + + D L SA + +KI++ SS + + S + C ++N +
Sbjct: 64 ISDVAWSSDSNLLVSASDDKTLKIWDVSS--------GKCLKTLKGHSNYVFCCNFNPQS 115
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
NLI S +D V IWDV T + + H +V F+ + S++VS S D C++
Sbjct: 116 -NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRI-- 171
Query: 449 ADHHIHYYDLRNISQPLH-VFNGHKKAVSYVKFLSNNELASAST-DSSLRLWDVKENLPL 506
+D + Q L + + VS+VKF N + A+T D++L+LWD + L
Sbjct: 172 -------WDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 223
Query: 507 HTFRGHTNEKN--FVGLTVNN-EYIACGSETNEVFVYH 541
T+ GH NEK F +V ++I GSE N V++++
Sbjct: 224 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 261
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 49/205 (23%), Positives = 92/205 (44%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+SS++F + E AS+ + IKI+ D + + +S ++W+ +
Sbjct: 22 VSSVKFSPNGEWLASSSADKLIKIWG-------AYDGKFEKTISGHKLGISDVAWSSDSN 74
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
L+++SD D + IWDV++ + + + H + +F+ + +++VSGS D V D
Sbjct: 75 LLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDV 132
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTFRG 511
L+ + P H + AV + + + + S+S D R+WD L T
Sbjct: 133 KTGKC-LKTL--PAH--SDPVSAVHFNR--DGSLIVSSSYDGLCRIWDTASGQCLKTLID 185
Query: 512 HTNEK-NFVGLTVNNEYIACGSETN 535
N +FV + N +YI + N
Sbjct: 186 DDNPPVSFVKFSPNGKYILAATLDN 210
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 184 (69.8 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 50/149 (33%), Positives = 78/149 (52%)
Query: 394 IASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHI 453
IAS DGI+TI+DV + V E H S+ FS +L++ SDD G H+
Sbjct: 185 IASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFS-PNSQLLLTASDD---G----HM 236
Query: 454 HYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTFRGH 512
YD+ + S + +GH V V F + + AS+S+D+S+++WD E LHTF H
Sbjct: 237 KLYDVTH-SDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEH 295
Query: 513 TNEKNFVGLTVNNEYIACGSETNEVFVYH 541
T++ V + N+ +A SE + +Y+
Sbjct: 296 TDQVWGVRYSPGNDKVASASEDKSLNIYY 324
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 183 (69.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 64/218 (29%), Positives = 105/218 (48%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYT 390
IS + + D L SA + +KI++ SS + + S + C ++N +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSS--------GKCLKTLKGHSNYVFCCNFNPQS 141
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
NLI S +D V IWDV T + + H +V F+ + S++VS S D C++
Sbjct: 142 -NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRI-- 197
Query: 449 ADHHIHYYDLRNISQPLH-VFNGHKKAVSYVKFLSNNELASAST-DSSLRLWDVKENLPL 506
+D + Q L + + VS+VKF N + A+T D++L+LWD + L
Sbjct: 198 -------WDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249
Query: 507 HTFRGHTNEKN--FVGLTVNN-EYIACGSETNEVFVYH 541
T+ GH NEK F +V ++I GSE N V++++
Sbjct: 250 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 117 (46.2 bits), Expect = 0.00064, P = 0.00064
Identities = 49/205 (23%), Positives = 92/205 (44%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+SS++F + E AS+ + IKI+ D + + +S ++W+ +
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWG-------AYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
L+++SD D + IWDV++ + + + H + +F+ + +++VSGS D V D
Sbjct: 101 LLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDV 158
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTFRG 511
L+ + P H + AV + + + + S+S D R+WD L T
Sbjct: 159 KTGKC-LKTL--PAH--SDPVSAVHFNR--DGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 512 HTNEK-NFVGLTVNNEYIACGSETN 535
N +FV + N +YI + N
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDN 236
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 183 (69.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 64/218 (29%), Positives = 105/218 (48%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYT 390
IS + + D L SA + +KI++ SS + + S + C ++N +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSS--------GKCLKTLKGHSNYVFCCNFNPQS 141
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
NLI S +D V IWDV T + + H +V F+ + S++VS S D C++
Sbjct: 142 -NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRI-- 197
Query: 449 ADHHIHYYDLRNISQPLH-VFNGHKKAVSYVKFLSNNELASAST-DSSLRLWDVKENLPL 506
+D + Q L + + VS+VKF N + A+T D++L+LWD + L
Sbjct: 198 -------WDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249
Query: 507 HTFRGHTNEKN--FVGLTVNN-EYIACGSETNEVFVYH 541
T+ GH NEK F +V ++I GSE N V++++
Sbjct: 250 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 117 (46.2 bits), Expect = 0.00064, P = 0.00064
Identities = 49/205 (23%), Positives = 92/205 (44%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+SS++F + E AS+ + IKI+ D + + +S ++W+ +
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWG-------AYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
L+++SD D + IWDV++ + + + H + +F+ + +++VSGS D V D
Sbjct: 101 LLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDV 158
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTFRG 511
L+ + P H + AV + + + + S+S D R+WD L T
Sbjct: 159 KTGKC-LKTL--PAH--SDPVSAVHFNR--DGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 512 HTNEK-NFVGLTVNNEYIACGSETN 535
N +FV + N +YI + N
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDN 236
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 183 (69.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 64/218 (29%), Positives = 105/218 (48%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYT 390
IS + + D L SA + +KI++ SS + + S + C ++N +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSS--------GKCLKTLKGHSNYVFCCNFNPQS 141
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
NLI S +D V IWDV T + + H +V F+ + S++VS S D C++
Sbjct: 142 -NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRI-- 197
Query: 449 ADHHIHYYDLRNISQPLH-VFNGHKKAVSYVKFLSNNELASAST-DSSLRLWDVKENLPL 506
+D + Q L + + VS+VKF N + A+T D++L+LWD + L
Sbjct: 198 -------WDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249
Query: 507 HTFRGHTNEKN--FVGLTVNN-EYIACGSETNEVFVYH 541
T+ GH NEK F +V ++I GSE N V++++
Sbjct: 250 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 117 (46.2 bits), Expect = 0.00064, P = 0.00064
Identities = 49/205 (23%), Positives = 92/205 (44%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+SS++F + E AS+ + IKI+ D + + +S ++W+ +
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWG-------AYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
L+++SD D + IWDV++ + + + H + +F+ + +++VSGS D V D
Sbjct: 101 LLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDV 158
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTFRG 511
L+ + P H + AV + + + + S+S D R+WD L T
Sbjct: 159 KTGKC-LKTL--PAH--SDPVSAVHFNR--DGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 512 HTNEK-NFVGLTVNNEYIACGSETN 535
N +FV + N +YI + N
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDN 236
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 183 (69.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 64/218 (29%), Positives = 105/218 (48%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYT 390
IS + + D L SA + +KI++ SS + + S + C ++N +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSS--------GKCLKTLKGHSNYVFCCNFNPQS 141
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
NLI S +D V IWDV T + + H +V F+ + S++VS S D C++
Sbjct: 142 -NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRI-- 197
Query: 449 ADHHIHYYDLRNISQPLH-VFNGHKKAVSYVKFLSNNELASAST-DSSLRLWDVKENLPL 506
+D + Q L + + VS+VKF N + A+T D++L+LWD + L
Sbjct: 198 -------WDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249
Query: 507 HTFRGHTNEKN--FVGLTVNN-EYIACGSETNEVFVYH 541
T+ GH NEK F +V ++I GSE N V++++
Sbjct: 250 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 117 (46.2 bits), Expect = 0.00064, P = 0.00064
Identities = 49/205 (23%), Positives = 92/205 (44%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+SS++F + E AS+ + IKI+ D + + +S ++W+ +
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWG-------AYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
L+++SD D + IWDV++ + + + H + +F+ + +++VSGS D V D
Sbjct: 101 LLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDV 158
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTFRG 511
L+ + P H + AV + + + + S+S D R+WD L T
Sbjct: 159 KTGKC-LKTL--PAH--SDPVSAVHFNR--DGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 512 HTNEK-NFVGLTVNNEYIACGSETN 535
N +FV + N +YI + N
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDN 236
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 183 (69.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 64/218 (29%), Positives = 105/218 (48%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYT 390
IS + + D L SA + +KI++ SS + + S + C ++N +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSS--------GKCLKTLKGHSNYVFCCNFNPQS 141
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
NLI S +D V IWDV T + + H +V F+ + S++VS S D C++
Sbjct: 142 -NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRI-- 197
Query: 449 ADHHIHYYDLRNISQPLH-VFNGHKKAVSYVKFLSNNELASAST-DSSLRLWDVKENLPL 506
+D + Q L + + VS+VKF N + A+T D++L+LWD + L
Sbjct: 198 -------WDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249
Query: 507 HTFRGHTNEKN--FVGLTVNN-EYIACGSETNEVFVYH 541
T+ GH NEK F +V ++I GSE N V++++
Sbjct: 250 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 117 (46.2 bits), Expect = 0.00064, P = 0.00064
Identities = 49/205 (23%), Positives = 92/205 (44%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+SS++F + E AS+ + IKI+ D + + +S ++W+ +
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWG-------AYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
L+++SD D + IWDV++ + + + H + +F+ + +++VSGS D V D
Sbjct: 101 LLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDV 158
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTFRG 511
L+ + P H + AV + + + + S+S D R+WD L T
Sbjct: 159 KTGKC-LKTL--PAH--SDPVSAVHFNR--DGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 512 HTNEK-NFVGLTVNNEYIACGSETN 535
N +FV + N +YI + N
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDN 236
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 183 (69.5 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 62/218 (28%), Positives = 105/218 (48%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYT 390
IS + + D L S + +K++E S+ + + + S + C ++N +
Sbjct: 117 ISDVAWSSDSRLLVSGSDDKTLKVWELSTGKS--------LKTLKGHSNYVFCCNFNPQS 168
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
NLI S +D V IWDV T + + H +V F+ + S++VS S D C++
Sbjct: 169 -NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRI-- 224
Query: 449 ADHHIHYYDLRNISQPLH-VFNGHKKAVSYVKFLSNNELASAST-DSSLRLWDVKENLPL 506
+D + Q L + + VS+VKF N + A+T D++L+LWD + L
Sbjct: 225 -------WDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 276
Query: 507 HTFRGHTNEKN--FVGLTVNN-EYIACGSETNEVFVYH 541
T+ GH NEK F +V ++I GSE N V++++
Sbjct: 277 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWN 314
Score = 119 (46.9 bits), Expect = 0.00045, P = 0.00044
Identities = 45/207 (21%), Positives = 93/207 (44%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+S+++F + E AS+ + IKI+ D + + +S ++W+ ++
Sbjct: 75 VSAVKFSPNGEWLASSSADKLIKIWG-------AYDGKFEKTISGHKLGISDVAWSSDSR 127
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
L++ SD D + +W+++T +S+ + H + +F+ + +++VSGS D
Sbjct: 128 LLVSGSD-DKTLKVWELSTGKSLKTLKGHSNYVFCCNFN-PQSNLIVSGS-------FDE 178
Query: 452 HIHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTF 509
+ +D+R + L + AV + + + + S+S D R+WD L T
Sbjct: 179 SVRIWDVRTGKCLKTLPAHSDPVSAVHFNR--DGSLIVSSSYDGLCRIWDTASGQCLKTL 236
Query: 510 RGHTNEK-NFVGLTVNNEYIACGSETN 535
N +FV + N +YI + N
Sbjct: 237 IDDDNPPVSFVKFSPNGKYILAATLDN 263
>DICTYBASE|DDB_G0270992 [details] [associations]
symbol:sec31 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030127 "COPII
vesicle coat" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004098
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02840 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0270992 GO:GO:0006886
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005681 GO:GO:0006888
GO:GO:0030127 eggNOG:NOG248389 KO:K14005 RefSeq:XP_646396.1
ProteinModelPortal:Q55CT5 STRING:Q55CT5 PRIDE:Q55CT5
EnsemblProtists:DDB0235185 GeneID:8617351 KEGG:ddi:DDB_G0270992
OMA:MMNQPPM Uniprot:Q55CT5
Length = 1355
Score = 186 (70.5 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 52/200 (26%), Positives = 100/200 (50%)
Query: 332 ISSIEFD-RDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYT 390
+ SI+F+ ++ L AS G + I++ S +P ++ P + S ++C++WNK
Sbjct: 132 VQSIDFNVQNPNLLASGGSDSEVFIWDLSDPT-QPSALN-PGSKSQQSSDITCVAWNKKV 189
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAW--SVDFSCTEPSMLVSGSDDCKVGS 448
+++ S+ Y+G + IWD+ + +++M + ++ S+ + +E + +V+ S+D
Sbjct: 190 AHILGSASYNGYIVIWDLKSKKTLMTINDRNRKCKYRSIVWHPSEATQIVAASED----- 244
Query: 449 ADHH-IHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELA-SASTDSSLRLWDVKENLP 505
DH I +DLRN + P+ GHKK V + + S+N L S D+ W+
Sbjct: 245 DDHPVIQAWDLRNTTSPVKSMEGHKKGVWGLSWCPSDNALLLSTGKDNKTFCWNFDRQEI 304
Query: 506 LHTFRGHTNEKNFVGLTVNN 525
L + N +N + NN
Sbjct: 305 LCEINDN-NSRNNINNNSNN 323
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 174 (66.3 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 63/218 (28%), Positives = 104/218 (47%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYT 390
IS + + D L SA + +KI++ SS + + S + C ++N +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSS--------GKCLKTLKGHSNYVFCCNFNPQS 141
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
NLI S +D V IWDV T + + H +V F+ + S++VS S D C++
Sbjct: 142 -NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRI-- 197
Query: 449 ADHHIHYYDLRNISQPLH-VFNGHKKAVSYVKFLSNNELASAST-DSSLRLWDVKENLPL 506
+D + Q L + + VS+VKF N + A+T D++L+LWD + L
Sbjct: 198 -------WDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249
Query: 507 HTFRGHTNEKN--FVGLTVNN-EYIACGSETNEVFVYH 541
T+ H NEK F +V ++I GSE N V++++
Sbjct: 250 KTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 117 (46.2 bits), Expect = 0.00064, P = 0.00064
Identities = 49/205 (23%), Positives = 92/205 (44%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+SS++F + E AS+ + IKI+ D + + +S ++W+ +
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWG-------AYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
L+++SD D + IWDV++ + + + H + +F+ + +++VSGS D V D
Sbjct: 101 LLVSASD-DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDV 158
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTFRG 511
L+ + P H + AV + + + + S+S D R+WD L T
Sbjct: 159 KTGKC-LKTL--PAH--SDPVSAVHFNR--DGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 512 HTNEK-NFVGLTVNNEYIACGSETN 535
N +FV + N +YI + N
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDN 236
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 155 (59.6 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 327 HAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSW 386
HA+N+ S + L A+ G R+ ++ +N+P + M S + +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWS----INKPNCI---MSLTGHTSPVESVRL 71
Query: 387 NKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKV 446
N + LI + G + +WD+ ++ + H+ S+DF + SGS D
Sbjct: 72 NT-PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFH-PYGEFVASGSQDT-- 127
Query: 447 GSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLP 505
+I +D+R + GH +AV ++F + + LASA+ D +++LWD+
Sbjct: 128 -----NIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 506 LHTFRGHTNEKNFVGLTVNNEYIACGS 532
+ F GHT N V N +A GS
Sbjct: 182 MSEFPGHTGPVNVVEFHPNEYLLASGS 208
Score = 134 (52.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 41/169 (24%), Positives = 78/169 (46%)
Query: 379 SKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV 438
S +S L K + L+A+ D V +W + +M H SV + E ++V
Sbjct: 21 SNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIV 79
Query: 439 SGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRL 497
+GS GS I +DL ++ L GHK + + F E +AS S D++++L
Sbjct: 80 AGSQS---GS----IRVWDLE-AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 498 WDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
WD++ + +RGH+ + + + +++A ++ + V ++ K
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
>UNIPROTKB|E9PJB5 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
IPI:IPI00980524 ProteinModelPortal:E9PJB5 SMR:E9PJB5
Ensembl:ENST00000498306 ArrayExpress:E9PJB5 Bgee:E9PJB5
Uniprot:E9PJB5
Length = 189
Score = 155 (59.6 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 47 LMTDAFMTACGHSFCYTCIFTHLRNKSDCPCCGCHL-TCKHIFPXXXXXXXXXXTSAR-- 103
++ +A+MT CGHSFCY CI L + + CP C + H++P R
Sbjct: 1 MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFE 60
Query: 104 ----QVANAASPIEHLRLALQQ---GCE---VSVKELDGLLSLLVAKKRKLEQEEAETNM 153
++ ++ S R + Q G + + + ++ +L LLV KK++LE E +
Sbjct: 61 EKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQL 120
Query: 154 QILLNFLHCLRKQKLEELN 172
QIL+ FL R+ K EE++
Sbjct: 121 QILMEFLKVARRNKREEMS 139
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 176 (67.0 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 44/153 (28%), Positives = 73/153 (47%)
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
+N + SS DG + +W + T ++ Y+ H W FS VSG D ++ +
Sbjct: 511 RNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFS-PFGYYFVSGGHDRVARLWA 569
Query: 449 ADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLH 507
DH+ QPL +F GH V+ +F N N +A+ S+D ++RLWDV +
Sbjct: 570 TDHY----------QPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVR 619
Query: 508 TFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
F GH + + + N +++A GS V ++
Sbjct: 620 IFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLW 652
Score = 140 (54.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 396 SSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHY 455
S +D + +W Q + + H D +CT S+ GS+D +
Sbjct: 558 SGGHDRVARLWATDHYQPLRIFAGH-----LADVTCTR---FHPNSNYVATGSSDRTVRL 609
Query: 456 YDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTFRGHTN 514
+D+ N + +F GHK + + F N + LAS STD + LWD+ L + +GHT
Sbjct: 610 WDVLN-GNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTG 668
Query: 515 EKNFVGLTVNNEYIACGSETNEV 537
+ + + E IA GS N V
Sbjct: 669 TIYALKFSRDGEIIASGSIDNTV 691
Score = 39 (18.8 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 392 NLIASSDYDGIVTIWDVT 409
+LIA D V +W VT
Sbjct: 439 SLIAGGFADSTVRVWSVT 456
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 171 (65.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/153 (28%), Positives = 71/153 (46%)
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
+N + SS DG V +W + T ++ Y+ H W FS VSG D ++ +
Sbjct: 315 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLWA 373
Query: 449 ADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLH 507
DH+ QPL +F GH V+ +F N N +A+ S D ++RLWDV +
Sbjct: 374 TDHY----------QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 423
Query: 508 TFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
F GH + + + N ++A G+ V ++
Sbjct: 424 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 456
Score = 135 (52.6 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 38/143 (26%), Positives = 63/143 (44%)
Query: 396 SSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHY 455
S +D + +W Q + + H D +CT S+ GSAD +
Sbjct: 362 SGGHDRVARLWATDHYQPLRIFAGH-----LADVNCTR---FHPNSNYVATGSADRTVRL 413
Query: 456 YDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTFRGHTN 514
+D+ N + +F GHK + + F N LA+ +TD + LWD+ L + +GHT+
Sbjct: 414 WDVLN-GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 472
Query: 515 EKNFVGLTVNNEYIACGSETNEV 537
+ + + E +A GS N V
Sbjct: 473 TVCSLRFSRDGEILASGSMDNTV 495
Score = 39 (18.8 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 392 NLIASSDYDGIVTIWDVT 409
+LIA D V +W VT
Sbjct: 243 SLIAGGFADSTVRVWSVT 260
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 168 (64.2 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 56/215 (26%), Positives = 98/215 (45%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEF-SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYT 390
++ I + D SA + +KIFE +S + + H + + C ++N +
Sbjct: 132 VNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGH--------NNYVFCCNFNPQS 183
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD 450
+L+ S +D V IWDV T + H +V F+ + S++ SGS D G
Sbjct: 184 -SLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFN-RDGSLIASGSYD---GL-- 236
Query: 451 HHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAST-DSSLRLWDVKENLPLHTF 509
+ +D N + + V++VKF N + AS DS+L+LWD + L +
Sbjct: 237 --VRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQY 294
Query: 510 RGHTNEKN--FVGLTVNN-EYIACGSETNEVFVYH 541
GH N K F +V ++I GSE ++++++
Sbjct: 295 TGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWN 329
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 168 (64.2 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 56/215 (26%), Positives = 98/215 (45%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEF-SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYT 390
++ I + D SA + +KIFE +S + + H + + C ++N +
Sbjct: 132 VNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGH--------NNYVFCCNFNPQS 183
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD 450
+L+ S +D V IWDV T + H +V F+ + S++ SGS D G
Sbjct: 184 -SLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFN-RDGSLIASGSYD---GL-- 236
Query: 451 HHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAST-DSSLRLWDVKENLPLHTF 509
+ +D N + + V++VKF N + AS DS+L+LWD + L +
Sbjct: 237 --VRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQY 294
Query: 510 RGHTNEKN--FVGLTVNN-EYIACGSETNEVFVYH 541
GH N K F +V ++I GSE ++++++
Sbjct: 295 TGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWN 329
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 183 (69.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 63/228 (27%), Positives = 103/228 (45%)
Query: 326 FHAANI-ISSIEFDRDDELFASAGVSRRIKIFEFS-----SVVNEPRDVHYPMVEMPTRS 379
FH N ++ IEF+ D L A+ IK++ SV+ RD H P TR
Sbjct: 457 FHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLK--RDRHKPQEN--TRK 512
Query: 380 KLSC------LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTE 433
+ +S++ K L++ S+ D V +W + T +++ Y+ H + W V FS
Sbjct: 513 LIGHSGPVYGVSFSPDNKYLLSCSE-DKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLG 571
Query: 434 PSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTD 492
+ + D A HI+ PL +F GH V V+F N N + + S+D
Sbjct: 572 HYFVTASHDQTARLWATDHIY---------PLRIFAGHINDVDCVEFHPNSNYVFTGSSD 622
Query: 493 SSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
+ R+WDV + F GHTN N + ++ + ++A G E + V+
Sbjct: 623 KTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVW 670
Score = 37 (18.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 136 LLVA-KKRKLEQEEAETNMQILLNFLH 161
L VA +K K ++T++ +L+ FLH
Sbjct: 276 LAVAYRKYKYRILVSKTSLNLLIYFLH 302
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 167 (63.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 60/230 (26%), Positives = 109/230 (47%)
Query: 343 LFASAGVSRRIKIFEFSSVVNEPRDVHY-PMVEMPTRSKLSC-LSW-NKYTKNLIASSDY 399
+ AS G S + IF+++ +EP+D + P + + +SW N +L+ + D
Sbjct: 134 IIASRGPSDDVYIFDYTKHPSEPKDTKFRPQLRLKGHEGEGYGMSWSNTREGHLLTAGD- 192
Query: 400 DGIVTIWDVTTSQSVM-------EYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
DG++ WD+ +Q++ +++ H A V F V GS VG D
Sbjct: 193 DGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHN--FVFGS----VGD-DRK 245
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE-NLPLHTF 509
++ +DLR S+P GH V+ + F +E LA+ S D ++ LWD++ ++T
Sbjct: 246 LNLWDLRQ-SKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTL 304
Query: 510 RGHTNEKNFVGLTVNNEYIACGSETNE-VFVYH-KAISKPAASHRFGSDA 557
+ H +E V + + E + S +++ V V+ I P++S SD+
Sbjct: 305 KHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDS 354
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 51/208 (24%), Positives = 83/208 (39%)
Query: 336 EFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIA 395
++D + E F G K ++ +N P +VH MP + ++ + +
Sbjct: 91 KWDSEREEFGGYGEGSAAK-WDTEIKINHPGEVHRARY-MPHNPFIIA---SRGPSDDVY 145
Query: 396 SSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHY 455
DY + T + + + HE + + +S T L++ DD + D + +
Sbjct: 146 IFDYTKHPSEPKDTKFRPQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHWDINANQ 205
Query: 456 YDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDVKENLPLHTFRGHT 513
I P F GH V F L N S D L LWD++++ P T GHT
Sbjct: 206 TISGQIV-PQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAVGHT 264
Query: 514 NEKNFVGLTVNNEYI-ACGSETNEVFVY 540
E N + +EYI A GS V ++
Sbjct: 265 AEVNCITFNPFSEYILATGSVDKTVALW 292
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 163 (62.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 59/209 (28%), Positives = 97/209 (46%)
Query: 334 SIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYTKN 392
S+ F D + A+ ++ IF + E Y + TR K + ++++ K
Sbjct: 111 SVAFSPDSQHLATGSHVGKVNIFGVETGKKE-----Y---SLDTRGKFILSIAYSPDGKY 162
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L AS DGI+ I+D+ T + + E H S+ FS T+ +LV+ SDD G +
Sbjct: 163 L-ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-TDSQLLVTASDD---G----Y 213
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTFRG 511
I YD+++ S +GH V V F ++ S+S+D S+++WDV +HTF
Sbjct: 214 IKIYDVQHASLAA-TLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLD 272
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H ++ V N I + E+ VY
Sbjct: 273 HQDQVWGVKYNRNGSKIVSVGDDQEIHVY 301
Score = 116 (45.9 bits), Expect = 0.00069, P = 0.00069
Identities = 43/191 (22%), Positives = 84/191 (43%)
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
N++ASS D + +WD+ + + + + AWSV FS + L +GS VG
Sbjct: 77 NIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFS-PDSQHLATGSH---VGK--- 129
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTFRG 511
++ + + + + K +S LAS + D + ++D+ LHT G
Sbjct: 130 -VNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG 188
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVY---HKAISKPAASHRFGSDADHV---DDDMG 565
H + + +++ + S+ + +Y H +++ + H GS +V DD
Sbjct: 189 HAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGH--GSWVLNVAFSPDD-- 244
Query: 566 SYFISAVCWKS 576
++F+S+ KS
Sbjct: 245 AHFVSSSSDKS 255
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 163 (62.4 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 57/218 (26%), Positives = 99/218 (45%)
Query: 330 NIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKY 389
N IS + F D SA + +K+++ E + ++ + C+++N
Sbjct: 72 NGISDVAFSSDARFIVSASDDKTLKLWDV-----ETGSLIKTLIGHTNYA--FCVNFNPQ 124
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKV- 446
+ N+I S +D V IWDVTT + + H +VDF+ + S++VS S D C++
Sbjct: 125 S-NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFN-RDGSLIVSSSYDGLCRIW 182
Query: 447 GSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAST-DSSLRLWDVKENLP 505
S H ++ + + VS+V+F N + T D++LRLW++
Sbjct: 183 DSGTGHC----VKTL------IDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKF 232
Query: 506 LHTFRGHTNEKNFVGLT---VNNEYIACGSETNEVFVY 540
L T+ GH N + + N + I GSE N V ++
Sbjct: 233 LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Score = 163 (62.4 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 54/218 (24%), Positives = 105/218 (48%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYT 390
+SS++F D L ASA + I+ + +++ N+P + P+ E +S ++++
Sbjct: 27 VSSVKFSSDGRLLASASADKTIRTYTINTI-NDP--IAEPVQEFTGHENGISDVAFSSDA 83
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD 450
+ ++++SD D + +WDV T + H A+ V+F+ + +M+VSGS D
Sbjct: 84 RFIVSASD-DKTLKLWDVETGSLIKTLIGHTNYAFCVNFN-PQSNMIVSGS-------FD 134
Query: 451 HHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKENLPLHTF 509
+ +D+ + L V H V+ V F + L S+S D R+WD + T
Sbjct: 135 ETVRIWDVTT-GKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Query: 510 RGHTNEK-NFVGLTVNNEYIACGSETNEVFVYHKAISK 546
N +FV + N ++I G+ N + +++ + +K
Sbjct: 194 IDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAK 231
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 39/128 (30%), Positives = 62/128 (48%)
Query: 420 HEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVK 479
H + SV FS ++ +L S S D + + + I+ + I++P+ F GH+ +S V
Sbjct: 23 HNRAVSSVKFS-SDGRLLASASADKTIRT--YTINTIN-DPIAEPVQEFTGHENGISDVA 78
Query: 480 FLSNNE-LASASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVF 538
F S+ + SAS D +L+LWDV+ + T GHTN V + I GS V
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVR 138
Query: 539 VYHKAISK 546
++ K
Sbjct: 139 IWDVTTGK 146
Score = 115 (45.5 bits), Expect = 0.00097, P = 0.00097
Identities = 44/172 (25%), Positives = 76/172 (44%)
Query: 375 MPTRSK-LSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWS-VDFSCT 432
+P S ++ + +N+ +LI SS YDG+ IWD T V + E S V FS
Sbjct: 151 LPAHSDPVTAVDFNR-DGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPN 209
Query: 433 EPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKA---VSYVKFLSNNE-LAS 488
+LV G+ D+ + +++ + ++ L + GH A +S ++N + + S
Sbjct: 210 GKFILV--------GTLDNTLRLWNISS-AKFLKTYTGHVNAQYCISSAFSVTNGKRIVS 260
Query: 489 ASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
S D+ + +W++ L GHT V IA GS V ++
Sbjct: 261 GSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 170 (64.9 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 71/293 (24%), Positives = 130/293 (44%)
Query: 256 VRAQLNDLKEYYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLR 315
V N++K Y L +R + H ED VS +G H + R A +
Sbjct: 400 VATNSNEIKTYDLNTKRAQVLRGH-EDLVMSVDVSADGKHI-ISGSRDKSAMIWDLEKKE 457
Query: 316 VIAELRHGDLFHAANIISSIEFDR--DDELFA-SAGVSRRIKIFE-FSSVVNEPRD---- 367
IA+L G H +IS + + +FA +A R IK+++ FS+ + D
Sbjct: 458 SIAQLT-G---HTG-VISCVALPKKPSTSMFAITASDDRTIKLWKGFSTTSSSGGDDSKK 512
Query: 368 ----VHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKR 423
+ + ++ ++ +S K + A++ D V +W+V + + + H +
Sbjct: 513 KDKKISASVTKIAHEKDINSISIAPNDK-IFATASQDSYVKLWNVNNLEPITSIKAHRRG 571
Query: 424 AWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLS- 482
W V+FS + L C SAD I + L + + L GHK +V F+S
Sbjct: 572 VWHVEFSPIDQCFLT-----C---SADGTIKIWSLSDYTC-LKTLEGHKGSVLKASFISF 622
Query: 483 NNELASASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNE-YIACGSET 534
++ S +++ ++LW++K N L+TF GH ++ + + + E +I GS++
Sbjct: 623 GMQIVSVASEGLIKLWNIKTNECLNTFEGHESKIWALSVAKDQERFITGGSDS 675
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 169 (64.5 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 43/174 (24%), Positives = 94/174 (54%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTT---SQSVMEYEEHEKRAWSVDFSCTEPSMLVSG 440
++W+ NL+A++ +G+V++WD++ + ++ Y EHE+ A +V F +EP++L+SG
Sbjct: 71 VAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISG 130
Query: 441 SDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL--SNNELASASTDSSLRLW 498
S D G+ I +D+R+ + ++ + + ++V VKF + N ++ S + +++LW
Sbjct: 131 SQD---GT----IKCFDIRS-DKSINTYFCNSESVRDVKFSPHTQNIFSAVSENGTVQLW 182
Query: 499 DVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASH 551
D+++ + + F H ++A GS ++ V++ +P H
Sbjct: 183 DMRKWDKCMVQFTAHYGPVYTCDWHPTRNWLATGSRDKQIKVWNMD-GRPGLEH 235
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 169 (64.5 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 43/153 (28%), Positives = 70/153 (45%)
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
+N + S DG V +W + T ++ Y+ H W FS VSG D ++ +
Sbjct: 535 RNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLWA 593
Query: 449 ADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLH 507
DH+ QPL +F GH V+ +F N N +A+ S D ++RLWDV +
Sbjct: 594 TDHY----------QPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVR 643
Query: 508 TFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
F GH + + + N ++A G+ V ++
Sbjct: 644 IFTGHKGPIHSLAFSPNGRFLATGATDGRVLLW 676
Score = 135 (52.6 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 38/143 (26%), Positives = 63/143 (44%)
Query: 396 SSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHY 455
S +D + +W Q + + H D +CT S+ GSAD +
Sbjct: 582 SGGHDRVARLWATDHYQPLRIFAGH-----LADVTCTR---FHPNSNYIATGSADRTVRL 633
Query: 456 YDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTFRGHTN 514
+D+ N + +F GHK + + F N LA+ +TD + LWD+ L + +GHT+
Sbjct: 634 WDVLN-GNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 692
Query: 515 EKNFVGLTVNNEYIACGSETNEV 537
+ + + E +A GS N V
Sbjct: 693 TIYALRFSRDGEILASGSMDNTV 715
Score = 46 (21.3 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 149 AETNMQILLNFLHCLRKQKLEELNEI-QADLRCIEEDVYA 187
A + Q L+ L LR+ L E EI + + R + ED+ A
Sbjct: 70 AALDRQTLVAVLQFLRRSNLRESEEILRREARLLGEDLGA 109
Score = 40 (19.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 113 EHLRLALQQGCEVSVKELDGLLSLLVAKKRKLEQEEAETNMQIL 156
EHL + + G S +++D ++ L A + K E +A+ +L
Sbjct: 315 EHLYIDIFDGMPRSKQQIDAMVGSL-AGEAKREANKAKVFFGLL 357
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 163 (62.4 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 46/154 (29%), Positives = 75/154 (48%)
Query: 383 CLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
CLS++ +++ + D +WD+ T + +M E H + VDFS + +GS
Sbjct: 400 CLSYHS-DGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFS-PNGFHIATGSQ 457
Query: 443 D--CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN--NELASASTDSSLRLW 498
D CK+ +DLR QP++ H +S VK+ + L + S DS+ ++W
Sbjct: 458 DNTCKI---------WDLRR-RQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIW 507
Query: 499 DVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGS 532
K PL T +GH N+ V + N++YIA S
Sbjct: 508 SNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTS 541
Score = 48 (22.0 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 22/109 (20%), Positives = 42/109 (38%)
Query: 205 KLRTFDDFTASKKTDEKAQISSQGLLMKDACGGPDSPYASQSGLTAARKQRVRAQLNDLK 264
K+ ++F K+ + +S+ +K + P A R++R++ L L
Sbjct: 112 KVALLEEFERKKRA-RQINVSTDDTEIKSNLRQLNEPICYFGEGPAERRRRLKELLAGLG 170
Query: 265 EYYLQKRR-QSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLATFTQYS 312
E + KR+ + + ++ E D YH G + R YS
Sbjct: 171 ENAINKRQYEDEERKQQQREQD----QATWYHEGPDSLRIARLWLADYS 215
>GENEDB_PFALCIPARUM|PFB0640c [details] [associations]
symbol:PfSec31p "COPII-coated vesicle component,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE001362
GenomeReviews:AE001362_GR RefSeq:XP_001349646.2
ProteinModelPortal:O96221 IntAct:O96221 MINT:MINT-1565319
PRIDE:O96221 EnsemblProtists:PFB0640c:mRNA GeneID:812728
KEGG:pfa:PFB0640c EuPathDB:PlasmoDB:PF3D7_0214100
HOGENOM:HOG000284340 ProtClustDB:CLSZ2514733 Uniprot:O96221
Length = 1471
Score = 170 (64.9 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 44/179 (24%), Positives = 93/179 (51%)
Query: 330 NIISSIEFDRD-DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNK 388
N I+ +E++R + L A+ G ++ I + ++ + P + P ++ K++CL+WNK
Sbjct: 163 NGINCLEYNRHKNNLIATGGNDGQLFITDIENLYS-PTS-YDPYLDKNNLQKITCLNWNK 220
Query: 389 YTKNLIASSDYDGIVTIWDVTTSQSVMEYEE-HEK-RAWSVDFSCTEPSMLVSGSDDCKV 446
+++A+S +G IWD+ +S + + + H + + S+ + +P+ ++ DD K
Sbjct: 221 KVSHILATSSNNGNTVIWDLKIKKSAVSFRDPHSRTKTSSLSWLSNQPTQVLISYDDDK- 279
Query: 447 GSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDVKEN 503
+ + +DLRN + P+ GH K ++ + F + N L S+ D + + W + N
Sbjct: 280 ---NPCLQLWDLRNSNYPIKEIIGHSKGINNICFSPIDTNLLLSSGKDVT-KCWYLDNN 334
>UNIPROTKB|O96221 [details] [associations]
symbol:Sec31p "Sec31p putative" species:36329 "Plasmodium
falciparum 3D7" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE001362 GenomeReviews:AE001362_GR
RefSeq:XP_001349646.2 ProteinModelPortal:O96221 IntAct:O96221
MINT:MINT-1565319 PRIDE:O96221 EnsemblProtists:PFB0640c:mRNA
GeneID:812728 KEGG:pfa:PFB0640c EuPathDB:PlasmoDB:PF3D7_0214100
HOGENOM:HOG000284340 ProtClustDB:CLSZ2514733 Uniprot:O96221
Length = 1471
Score = 170 (64.9 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 44/179 (24%), Positives = 93/179 (51%)
Query: 330 NIISSIEFDRD-DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNK 388
N I+ +E++R + L A+ G ++ I + ++ + P + P ++ K++CL+WNK
Sbjct: 163 NGINCLEYNRHKNNLIATGGNDGQLFITDIENLYS-PTS-YDPYLDKNNLQKITCLNWNK 220
Query: 389 YTKNLIASSDYDGIVTIWDVTTSQSVMEYEE-HEK-RAWSVDFSCTEPSMLVSGSDDCKV 446
+++A+S +G IWD+ +S + + + H + + S+ + +P+ ++ DD K
Sbjct: 221 KVSHILATSSNNGNTVIWDLKIKKSAVSFRDPHSRTKTSSLSWLSNQPTQVLISYDDDK- 279
Query: 447 GSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDVKEN 503
+ + +DLRN + P+ GH K ++ + F + N L S+ D + + W + N
Sbjct: 280 ---NPCLQLWDLRNSNYPIKEIIGHSKGINNICFSPIDTNLLLSSGKDVT-KCWYLDNN 334
>TAIR|locus:2087433 [details] [associations]
symbol:AT3G63460 "AT3G63460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016020 "membrane" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006007 "glucose catabolic process" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000230582 KO:K14005
InterPro:IPR009917 Pfam:PF07304 OMA:NQPPPMM EMBL:AY099702
EMBL:BT008435 IPI:IPI00547111 RefSeq:NP_851024.1 UniGene:At.22771
UniGene:At.67091 ProteinModelPortal:Q8L611 SMR:Q8L611 IntAct:Q8L611
STRING:Q8L611 PRIDE:Q8L611 ProMEX:Q8L611 EnsemblPlants:AT3G63460.1
GeneID:825521 KEGG:ath:AT3G63460 TAIR:At3g63460 InParanoid:Q8L611
PhylomeDB:Q8L611 ProtClustDB:CLSN2680494 ArrayExpress:Q8L611
Genevestigator:Q8L611 Uniprot:Q8L611
Length = 1104
Score = 168 (64.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 42/175 (24%), Positives = 89/175 (50%)
Query: 332 ISSIEFDR-DDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVE---MPTRSKLSCLSWN 387
+ +EF+ L AS I I++ +EP H+P+++ T+ ++S +SWN
Sbjct: 125 VRGLEFNAISSNLLASGADDGEICIWDLLKP-SEPS--HFPLLKGSGSATQGEISFISWN 181
Query: 388 KYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSV-DFSCTEPSMLVSGSDDCKV 446
+ + ++AS+ Y+G IWD+ + ++ + + +R SV ++ + ++ SDD
Sbjct: 182 RKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDD--- 238
Query: 447 GSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWD 499
+ + +D+RNI P+ F GH++ V +++ ++ L + + D+ WD
Sbjct: 239 -DSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWD 292
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 148 (57.2 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 51/203 (25%), Positives = 90/203 (44%)
Query: 327 HAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSW 386
HA+N+ S + L A+ G R+ ++ +N+P + M S + +
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWS----INKPNCI---MSLTGHTSPVESVRL 75
Query: 387 NKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKV 446
N + LI + G + +WD+ ++ + H+ S+DF + SGS D
Sbjct: 76 NT-PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFH-PYGEFVASGSQDT-- 131
Query: 447 GSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLP 505
+I +D+R + GH +AV ++F + + LASA+ D +++LWD+
Sbjct: 132 -----NIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 185
Query: 506 LHTFRGHTNEKNFVGLTVNNEYI 528
+ F GHT N V N EY+
Sbjct: 186 MSEFPGHTGPVNVVEFHPN-EYL 207
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 41/169 (24%), Positives = 78/169 (46%)
Query: 379 SKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV 438
S +S L K + L+A+ D V +W + +M H SV + E ++V
Sbjct: 25 SNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIV 83
Query: 439 SGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRL 497
+GS GS I +DL ++ L GHK + + F E +AS S D++++L
Sbjct: 84 AGSQS---GS----IRVWDLE-AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 135
Query: 498 WDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
WD++ + +RGH+ + + + +++A ++ + V ++ K
Sbjct: 136 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 184
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 166 (63.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 49/188 (26%), Positives = 84/188 (44%)
Query: 370 YPMVEMPTRSK-LSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVD 428
Y + E S ++CL + + ++ + D V +W + +++ H SV
Sbjct: 7 YKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVT 66
Query: 429 FSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-A 487
F +E LV+ G+A I +DL ++ + GH+ V F E A
Sbjct: 67 FDASEG--LVAA------GAASGTIKLWDLEE-AKVVRTLTGHRSNCVSVNFHPFGEFFA 117
Query: 488 SASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKP 547
S S D++L++WD+++ +HT++GHT N + T + +I G E N V V+ K
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGK- 176
Query: 548 AASHRFGS 555
H F S
Sbjct: 177 -LLHEFKS 183
Score = 125 (49.1 bits), Expect = 0.00034, P = 0.00034
Identities = 34/149 (22%), Positives = 66/149 (44%)
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSA 449
++ L+A+ G + +WD+ ++ V H SV+F P S GS
Sbjct: 70 SEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNF---HPFGEFFAS-----GSL 121
Query: 450 DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHT 508
D ++ +D+R +H + GH + V+ ++F + + S D+ +++WD+ LH
Sbjct: 122 DTNLKIWDIRK-KGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE 180
Query: 509 FRGHTNEKNFVGLTVNNEYIACGSETNEV 537
F+ H + + + +A GS V
Sbjct: 181 FKSHEGKIQSLDFHPHEFLLATGSADKTV 209
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 55/210 (26%), Positives = 97/210 (46%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S+ F D +L +A + +K++ + R + + + + + + C ++ +
Sbjct: 106 VRSVHFCSDGQLLVTASDDKTVKVWS----THRQRFL-FSLTQHI--NWVRCAKFSPDGR 158
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
++++SD D V +WD T+ + V Y EH VDF PS G+ G D+
Sbjct: 159 LIVSASD-DKTVKLWDKTSRECVHSYCEHGGFVTYVDF---HPS----GTCIAAAGM-DN 209
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVKENLPLHTFR 510
+ +D R H + H AV+ + F S N L +AS+DS+L++ D+ E L+T
Sbjct: 210 TVKVWDTRTHRLVQH-YQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLH 268
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
GH V + EY A G +V V+
Sbjct: 269 GHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 44/186 (23%), Positives = 76/186 (40%)
Query: 378 RSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSML 437
R ++C+ ++ TK+L AS D + IW + + H+ V+FS PS
Sbjct: 19 RDAVTCVDFSLNTKHL-ASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS---PSGH 74
Query: 438 VSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLR 496
+ S GS D + + + N+ VF H V V F S+ +L +AS D +++
Sbjct: 75 LLAS-----GSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVK 128
Query: 497 LWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASH-RFGS 555
+W L + H N + + I S+ V ++ K + S+ G
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 556 DADHVD 561
+VD
Sbjct: 189 FVTYVD 194
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 167 (63.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 50/179 (27%), Positives = 83/179 (46%)
Query: 370 YPMVEMPTRS-KLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVD 428
Y + E S ++CLS K T L+ + D V +W + + S M H SV
Sbjct: 6 YKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVA 65
Query: 429 FSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LA 487
F+ E +L G++ I +DL S+ + F GH+ S V+F E LA
Sbjct: 66 FNSEEVLVLA--------GASSGVIKLWDLEE-SKMVRAFTGHRSNCSAVEFHPFGEFLA 116
Query: 488 SASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
S S+D++LR+WD ++ + T++GHT + + + + ++ G N V V+ K
Sbjct: 117 SGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGK 175
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 46/163 (28%), Positives = 81/163 (49%)
Query: 383 CLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
C ++N + +L+ S +D V IWDV T V H +V F+ + S++ SGS
Sbjct: 168 CCNFNPQS-SLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFN-RDGSLITSGSY 225
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVK 501
D G + +D N + + V++VKF N + + S++ D++L+LWD
Sbjct: 226 D---GL----VRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFG 278
Query: 502 ENLPLHTFRGHTNEKN--FVGLTVNN-EYIACGSETNEVFVYH 541
+ L ++GH N K F +V ++I GSE +++V++
Sbjct: 279 KGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWN 321
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 45/174 (25%), Positives = 81/174 (46%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSS--VVNEPRDVHYPMVEMPTRSKLSCLSWNKY 389
+S++ F+RD L S ++I++ ++ V D P V K S KY
Sbjct: 208 VSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFV---KFS--PNGKY 262
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSV--DFSCTEPSMLVSGSDDCKVG 447
I SS+ D + +WD +++ +Y+ HE + + +FS T ++SGS+DCK+
Sbjct: 263 ----ILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKI- 317
Query: 448 SADHHIHYYDLRNISQPLHVFNGHKKAVSYVK-FLSNNELASAST--DSSLRLW 498
++ + + Q L GH +AV N +AS + D+++R+W
Sbjct: 318 ----YVWNLQTKEVVQSLE---GHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 39/124 (31%), Positives = 65/124 (52%)
Query: 379 SKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV 438
S ++ +SW+ +NL S+ DG + IWD T+Q + + HE+ + F+ +L
Sbjct: 218 SAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLA 277
Query: 439 SGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLR 496
+ S D V +DLR ++ PLHV + H+ V V++ N+E LAS+ D L
Sbjct: 278 TASSDSTVA-------LFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLM 330
Query: 497 LWDV 500
+WD+
Sbjct: 331 VWDL 334
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 47/167 (28%), Positives = 80/167 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVT-TSQ-----SVMEYEEHEKRAWSVDFSCTEPSML 437
LSW+ + + + S D + +WDV+ T Q ++ YE HE V + ++
Sbjct: 174 LSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLF 233
Query: 438 VSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSL 495
S +D + + +D R +Q H H++ V+Y+ F NE LA+AS+DS++
Sbjct: 234 GSAGEDGR-------LVIWDTRT-NQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTV 285
Query: 496 RLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGS-ETNEVFVY 540
L+D+++ N PLH H E V N+E + S E + V+
Sbjct: 286 ALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVW 332
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/124 (27%), Positives = 58/124 (46%)
Query: 420 HEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVK 479
H+K + + +S + L+SGS D K+ D D + + V+ GH+ A++ V
Sbjct: 167 HDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQD--KVLNAMFVYEGHESAIADVS 224
Query: 480 FLSNNE--LASASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYI-ACGSETNE 536
+ NE SA D L +WD + N H + H E N++ NE++ A S +
Sbjct: 225 WHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDST 284
Query: 537 VFVY 540
V ++
Sbjct: 285 VALF 288
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 56/228 (24%), Positives = 97/228 (42%)
Query: 327 HAANIISSIEFDRDDELFASAG-VSRRIKIFE---FSSVVNEPRDVHYPMVEMPTRSKLS 382
H ++ S+ +DD A+ G + +F+ F S + P + T+
Sbjct: 128 HPESVCSAKLMPQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRL-TKHTQP 186
Query: 383 CLS--WNKYTKNLIASSDYDGIVTIWDVTT-----SQSVMEYE--EHEKRAWSVDFSCTE 433
C S WN +K + S D ++ WD+ S SV++ HEK+ V F
Sbjct: 187 CTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKH 246
Query: 434 PSMLVSGSDDCKVGSADHHIHYYDLRN---ISQPLHVFNGHKKAVSYVKFLSNNE--LAS 488
+L S S D ++H +D+R ++P + H + V F +N+ LA+
Sbjct: 247 QDLLASVS-------YDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILAT 299
Query: 489 ASTDSSLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
STD ++ LWD++ N LHT GH + + + + E I + +
Sbjct: 300 CSTDKTIALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSAD 347
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 43/131 (32%), Positives = 63/131 (48%)
Query: 386 WNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCK 445
W+ + AS+ D + IWDV + H+ S D+ + ++LV+G+ DC
Sbjct: 161 WSPHIPGCFASASGDQTLRIWDVKAPGVRLVIPAHQAEILSCDWCKYDENLLVTGAVDCS 220
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDV-KE 502
+ +DLRN+ QP+ + GH AV VKF + LAS S D ++R WD K
Sbjct: 221 LKG-------WDLRNVRQPVFILLGHTYAVRRVKFSPFHATLLASCSYDFTVRFWDFSKP 273
Query: 503 NLPLHTFRGHT 513
N L T HT
Sbjct: 274 NPLLETVEHHT 284
Score = 149 (57.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 40/122 (32%), Positives = 65/122 (53%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSD 442
++W++ ++++ +S DG + IWD+ + ++ Y+EH + A+SVD+S T LV
Sbjct: 71 VTWSENNEHVLITSSGDGSLQIWDIAKPKGPLQVYKEHTQEAYSVDWSQTRGEQLVVS-- 128
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE---LASASTDSSLRLWD 499
GS D +D + + L F GH+ V Y S + ASAS D +LR+WD
Sbjct: 129 ----GSWDQTAKLWDPA-VGKSLRTFKGHE-GVIYSTIWSPHIPGCFASASGDQTLRIWD 182
Query: 500 VK 501
VK
Sbjct: 183 VK 184
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 57/212 (26%), Positives = 93/212 (43%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S+ F D + F +A + IK++ H ++ + K++
Sbjct: 137 VRSVHFCSDGQSFVTASDDKTIKVWS----------THRQKFLFSLSQHINWVRCAKFSP 186
Query: 392 N--LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSA 449
+ LI S+ D V +WD T+ + V Y EH VDF PS G+ G
Sbjct: 187 DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDF---HPS----GTCVAAAGM- 238
Query: 450 DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVKENLPLHT 508
D+ + +D+R + L + H AV+ + F S N L +AS+DS+L++ D+ E L+T
Sbjct: 239 DNTVKVWDVRT-HRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYT 297
Query: 509 FRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
GH V + EY A G +V V+
Sbjct: 298 LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 160 (61.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 57/217 (26%), Positives = 96/217 (44%)
Query: 327 HAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHY-PMVEMPTRSKLSC-L 384
H + + + + A+ + IF++ PRD + P++ + +K L
Sbjct: 119 HEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGL 178
Query: 385 SWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDC 444
SWN + LI S+ D V WD+ +Q+V E K + S E + D
Sbjct: 179 SWNPNKEGLILSASDDQTVCHWDINANQNVAG-ELQAKDVFKGHESVVE-DVAWHVLHDG 236
Query: 445 KVGSA--DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDV 500
GS D + +D+R S P H + H V+ + F +E LA+ S D ++ LWD+
Sbjct: 237 VFGSVGDDKKLLIWDVRT-STPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDL 295
Query: 501 KE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNE 536
+ + LH+F H +E V + +NE I S T++
Sbjct: 296 RNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDK 332
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
++W+ + S D + IWDV TS + H + F+ +L +GS
Sbjct: 228 VAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGS-- 285
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVK 501
AD + +DLRN+ LH F H+ + V++ +NE LAS+ TD L +WD+
Sbjct: 286 -----ADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLS 340
Query: 502 E 502
+
Sbjct: 341 K 341
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 56/243 (23%), Positives = 99/243 (40%)
Query: 331 IISSIEFDRDDELF-ASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKY 389
+IS I DD F AS + R + F +V + P + + +++ +
Sbjct: 76 LISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVE----PDIRINHEGEVNRARYMPQ 131
Query: 390 TKNLIASSDYDGIVTIWDV---------TTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSG 440
N+IA+ V I+D T ++ + H K + + ++ + +++S
Sbjct: 132 KSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSA 191
Query: 441 SDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLW 498
SDD V D + + ++ Q VF GH+ V V + L + S D L +W
Sbjct: 192 SDDQTVCHWDINANQ-NVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIW 250
Query: 499 DVKENLPLHTFRGHTNEKNFVGLTVNNEYI-ACGSETNEVFVYHKAISKPAASHRFGSDA 557
DV+ + P H H+ E N + +E+I A GS V ++ + H F S
Sbjct: 251 DVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKL-HSFESHR 309
Query: 558 DHV 560
D +
Sbjct: 310 DEI 312
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 160 (61.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 57/217 (26%), Positives = 96/217 (44%)
Query: 327 HAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHY-PMVEMPTRSKLSC-L 384
H + + + + A+ + IF++ PRD + P++ + +K L
Sbjct: 119 HEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGL 178
Query: 385 SWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDC 444
SWN + LI S+ D V WD+ +Q+V E K + S E + D
Sbjct: 179 SWNPNKEGLILSASDDQTVCHWDINANQNVAG-ELQAKDVFKGHESVVE-DVAWHVLHDG 236
Query: 445 KVGSA--DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDV 500
GS D + +D+R S P H + H V+ + F +E LA+ S D ++ LWD+
Sbjct: 237 VFGSVGDDKKLLIWDVRT-STPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDL 295
Query: 501 KE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNE 536
+ + LH+F H +E V + +NE I S T++
Sbjct: 296 RNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDK 332
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
++W+ + S D + IWDV TS + H + F+ +L +GS
Sbjct: 228 VAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGS-- 285
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVK 501
AD + +DLRN+ LH F H+ + V++ +NE LAS+ TD L +WD+
Sbjct: 286 -----ADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLS 340
Query: 502 E 502
+
Sbjct: 341 K 341
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 56/243 (23%), Positives = 99/243 (40%)
Query: 331 IISSIEFDRDDELF-ASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKY 389
+IS I DD F AS + R + F +V + P + + +++ +
Sbjct: 76 LISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVE----PDIRINHEGEVNRARYMPQ 131
Query: 390 TKNLIASSDYDGIVTIWDV---------TTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSG 440
N+IA+ V I+D T ++ + H K + + ++ + +++S
Sbjct: 132 KSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSA 191
Query: 441 SDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLW 498
SDD V D + + ++ Q VF GH+ V V + L + S D L +W
Sbjct: 192 SDDQTVCHWDINANQ-NVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIW 250
Query: 499 DVKENLPLHTFRGHTNEKNFVGLTVNNEYI-ACGSETNEVFVYHKAISKPAASHRFGSDA 557
DV+ + P H H+ E N + +E+I A GS V ++ + H F S
Sbjct: 251 DVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKL-HSFESHR 309
Query: 558 DHV 560
D +
Sbjct: 310 DEI 312
>POMBASE|SPBC1A4.07c [details] [associations]
symbol:SPBC1A4.07c "U3 snoRNP-associated protein Sof1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1A4.07c GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006364 GO:GO:0032040
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 PIR:T39855 RefSeq:NP_595809.1
ProteinModelPortal:O74340 STRING:O74340 EnsemblFungi:SPBC1A4.07c.1
GeneID:2540796 KEGG:spo:SPBC1A4.07c OrthoDB:EOG4GXJWG
NextBio:20801914 Uniprot:O74340
Length = 436
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 46/172 (26%), Positives = 90/172 (52%)
Query: 381 LSCLSWNKYTK-NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVS 439
L + +N YT+ +++AS+ D + I+D+ TS + + + R S+ ++ E V+
Sbjct: 190 LPVVKFN-YTETSVLASAGMDRSIVIYDLRTSSPLTKLIT-KLRTNSISWNPMEAFNFVA 247
Query: 440 GSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLW 498
GS+D H+++ YD+RN+ + LHV+ H AV V F + E S S D ++R++
Sbjct: 248 GSED-------HNLYMYDMRNLKRALHVYKDHVSAVMSVDFSPTGQEFVSGSYDKTIRIY 300
Query: 499 DVKENLPLHTFRGHTNEK-NFVGLTVNNEYIACGSETNEVFVYHKAISKPAA 549
+V+E + ++ V +++ +YI GS+ + V ++ S A+
Sbjct: 301 NVREGHSRDVYHTKRMQRVTAVKFSMDAQYIFSGSDDSNVRLWRARASSRAS 352
Score = 127 (49.8 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 64/257 (24%), Positives = 117/257 (45%)
Query: 247 GLTAARKQRVRAQLNDLKEYYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGLEDFRSVLA 306
GL + + V + +D Y L K+ +S+ D L + +G +V
Sbjct: 112 GLVFSNQGDVLSCASDRYVYMLNKQDGKVKRSYLGDSSLLDIDTSKGGDLFATSGENV-- 169
Query: 307 TFTQYSRLRVIAELRHGDLFHAANIISSIEFD-RDDELFASAGVSRRIKIFEFSSVVNEP 365
+ YSR + + G A+ + ++F+ + + ASAG+ R I I++ +
Sbjct: 170 SIWDYSRDTPVTKFEWG-----ADTLPVVKFNYTETSVLASAGMDRSIVIYDLRT----- 219
Query: 366 RDVHYPMVEMPTRSKLSCLSWNKYTK-NLIASSDYDGIVTIWDVTTSQSVME-YEEHEKR 423
P+ ++ T+ + + +SWN N +A S+ D + ++D+ + + Y++H
Sbjct: 220 ---SSPLTKLITKLRTNSISWNPMEAFNFVAGSE-DHNLYMYDMRNLKRALHVYKDHVSA 275
Query: 424 AWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHK-KAVSYVKFLS 482
SVDFS T VSGS D K I Y++R V++ + + V+ VKF
Sbjct: 276 VMSVDFSPTGQEF-VSGSYD-KT------IRIYNVRE-GHSRDVYHTKRMQRVTAVKFSM 326
Query: 483 NNE-LASASTDSSLRLW 498
+ + + S S DS++RLW
Sbjct: 327 DAQYIFSGSDDSNVRLW 343
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 156 (60.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 45/144 (31%), Positives = 73/144 (50%)
Query: 377 TRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTT---SQSVMEYEEHEKRAWSVDFSCTE 433
TR L +W++ + +ASS DG + IWD + + +EEH K +SVD++
Sbjct: 57 TRDGLYDCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWN--- 113
Query: 434 PSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAV-SYVKFLSNNEL-ASAST 491
LV+ D GS D I ++ R + + L F H+ + S + N L AS S
Sbjct: 114 ---LVT-KDTFITGSWDQSIKIWNPR-MDRSLKTFREHRYCIYSAIWSPRNAHLFASVSG 168
Query: 492 DSSLRLWDVKENLPLHTFRGHTNE 515
D +L++WD ++N L+T + H +E
Sbjct: 169 DRTLKIWDSRDNRSLNTIKAHDHE 192
Score = 127 (49.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 41/142 (28%), Positives = 65/142 (45%)
Query: 386 WNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCK 445
W+ +L AS D + IWD ++S+ + H+ + D++ +V+GS
Sbjct: 155 WSPRNAHLFASVSGDRTLKIWDSRDNRSLNTIKAHDHEILTCDWNKYNDKEVVTGS---- 210
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWD-VKE 502
D I +D+R +P + GH AV +K ++E LAS S D S+ +WD +E
Sbjct: 211 ---VDKTIRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRARE 267
Query: 503 NLPLHTFRGHTNEKNFVGLTVN 524
P+ H E VGL N
Sbjct: 268 QDPIIARMDHHTEF-VVGLDWN 288
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 162 (62.1 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 56/212 (26%), Positives = 95/212 (44%)
Query: 327 HAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSW 386
H++N+ S + L A+ G R+ I+ V++P + M S + C+ +
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIW----AVSKPNCI---MSLTGHTSAVGCIQF 71
Query: 387 NKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKV 446
N + ++A S G + +WD+ ++ + H+ S+DF L SGS
Sbjct: 72 NSSEERVVAGS-LSGSLRLWDLEAAKILRTLMGHKASISSLDFH-PMGEYLASGS----- 124
Query: 447 GSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLP 505
D +I +D+R + GH +AV + F + + LASAS DS+++LWD+
Sbjct: 125 --VDSNIKLWDVRRKGCVFR-YKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKM 181
Query: 506 LHTFRGHTNEKNFVGLTVNNEYIACGSETNEV 537
+ F HT+ N V N +A GS V
Sbjct: 182 ITEFTSHTSAVNVVQFHPNEYLLASGSADRTV 213
Score = 132 (51.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 52/210 (24%), Positives = 93/210 (44%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ I+F+ +E + +S +++++ E + + M ++ +S L ++ +
Sbjct: 66 VGCIQFNSSEERVVAGSLSGSLRLWDL-----EAAKILRTL--MGHKASISSLDFHPMGE 118
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
L AS D + +WDV V Y+ H + + FS + L S SDD V
Sbjct: 119 YL-ASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFS-PDGKWLASASDDSTV----- 171
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKENLPLHTFR 510
+DL + + F H AV+ V+F N L AS S D +++LWD+++ + +
Sbjct: 172 --KLWDLI-AGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSE 228
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
G T V + + GSE N + VY
Sbjct: 229 GETGVVRSVLFNPDGSCLYSGSE-NTLRVY 257
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 163 (62.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 45/179 (25%), Positives = 82/179 (45%)
Query: 370 YPMVEMPTRSK-LSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVD 428
Y + E S ++CL + + ++ + D V +W + +++ H SV
Sbjct: 7 YKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVT 66
Query: 429 FSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-A 487
F +E +LV+ G+A I +DL ++ + GH+ V F E A
Sbjct: 67 FDASE--VLVAA------GAASGTIKLWDLEE-AKIVRTLTGHRSNCISVDFHPFGEFFA 117
Query: 488 SASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
S S D++L++WD+++ +HT++GHT N + T + ++ G E N V V+ K
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGK 176
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 158 (60.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 49/150 (32%), Positives = 72/150 (48%)
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDC-KVGSADH 451
LI S+ D V +WD T+ + V Y EH VDF PS G+ C S D+
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDF---HPS----GT--CIAAASMDN 209
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVKENLPLHTFR 510
+ +D+R + L + H AV+ + F S N L +AS+DS+L++ D+ E L+T
Sbjct: 210 TVKVWDVRT-HRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLH 268
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
GH V + EY A G +V V+
Sbjct: 269 GHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
Identities = 50/210 (23%), Positives = 89/210 (42%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
I+S++F + + AS + + ++ +P+ Y + ++C++++ +
Sbjct: 22 ITSVDFSLNTKQLASGSMDSCLMVWHM-----KPQSRAYRFAGH--KDAVTCVNFSP-SG 73
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
+L+AS D V IW + H SV F C++ LV+ SDD V
Sbjct: 74 HLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHF-CSDGQSLVTASDDKTVKVWST 132
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKENLPLHTFR 510
H + L ++SQ H V +F + L SAS D +++LWD +H++
Sbjct: 133 HRQKF-LFSLSQ-------HINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC 184
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H +V + IA S N V V+
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAASMDNTVKVW 214
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 158 (60.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 48/159 (30%), Positives = 77/159 (48%)
Query: 383 CLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
C ++ + ++++SD D V +WD T+ + V Y EH VDF PS G+
Sbjct: 150 CAKFSPDGRLIVSASD-DKTVKLWDKTSRECVHSYCEHGGFVTYVDF---HPS----GTC 201
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVK 501
G D+ + +D+R + L + H AV+ + F S N L +AS+DS+L++ D+
Sbjct: 202 IAAAGM-DNTVKVWDVRT-HRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLM 259
Query: 502 ENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
E L+T GH V + EY A G +V V+
Sbjct: 260 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 155 (59.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 44/173 (25%), Positives = 82/173 (47%)
Query: 380 KLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVS 439
+++C +++ + L+ +SD DG V +W + + + H S FS L++
Sbjct: 28 EVNCSAFSPDGRTLLTASD-DGCVYVWGTKSGRLLWRLAGHRGPVKSCCFS--PDGRLIA 84
Query: 440 GSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLW 498
S S+DH I +D+ S+ LHV GH+++V V F ++ +LAS D +W
Sbjct: 85 SS------SSDHSIRLWDVAR-SKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVW 137
Query: 499 DVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASH 551
+V+ +H GH + + ++ +A GS + V ++ S P S+
Sbjct: 138 EVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSY 190
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 58/213 (27%), Positives = 97/213 (45%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S F D L AS+ I++++ V + +H +++ RS + +S++ +K
Sbjct: 71 VKSCCFSPDGRLIASSSSDHSIRLWD----VARSKCLH--VLKGHQRS-VETVSFSPDSK 123
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
L AS +D +W+V + + V H S DFS T SD GS D
Sbjct: 124 QL-ASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPT--------SDSLATGSWDS 174
Query: 452 HIHYYDLRNISQPL---HVFNGHKKAVSYVKFLSNNELASASTDSSLRLWD-VKENLPLH 507
+H +DLR S P+ H GH +S + + ++ LAS S D ++ +W NLPL
Sbjct: 175 TVHIWDLR-ASTPVVSYHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQ 233
Query: 508 TFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
+GHT N + + + +A + V V+
Sbjct: 234 -LKGHTIWVNSLAFSPDELKLASAGYSRTVKVW 265
Score = 117 (46.2 bits), Expect = 0.00053, P = 0.00053
Identities = 49/202 (24%), Positives = 86/202 (42%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ ++ F D + AS G +R ++E V R VH +V + S S T
Sbjct: 113 VETVSFSPDSKQLASGGWDKRAIVWE----VQSGRRVHL-LVGHCDSIQSSDFS---PTS 164
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
+ +A+ +D V IWD+ S V+ Y E ++ C S L++ GS D
Sbjct: 165 DSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGLLAS------GSWDK 218
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTFR 510
I + + PL + GH V+ + F + +LASA ++++WD L T +
Sbjct: 219 TICVWKPTTNNLPLQL-KGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLK 277
Query: 511 GHTNEKNFVGLTVNNEYIACGS 532
G + + T + + + G+
Sbjct: 278 GMLDVAHACIFTPDGKLLVSGA 299
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 155 (59.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 57/209 (27%), Positives = 97/209 (46%)
Query: 334 SIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYTKN 392
S+ F D + A+ ++ IF + E Y + TR K + ++++ K
Sbjct: 111 SVAFSPDSQHLATGSHVGKVNIFGVETGKKE-----Y---SLDTRGKFILSIAYSPDGKY 162
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L AS DGI+ I+D+ T + + E H S+ FS + +LV+ SDD G +
Sbjct: 163 L-ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDD---G----Y 213
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTFRG 511
I Y++++ S +GH V V F ++ S+S+D S+++WDV +HTF
Sbjct: 214 IKIYEVQHASLAA-TLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLD 272
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H ++ V N I ++ E+ VY
Sbjct: 273 HQDQVWGVKYNKNGSKIVSVADDQEIHVY 301
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 165 (63.1 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 71/302 (23%), Positives = 127/302 (42%)
Query: 245 QSGLTAARKQRVRAQLNDLKEYYLQKRRQS-TAQSHKEDEGDLYAVSREGYHPGLEDFRS 303
QSG+ + + L D + + L R + TA G ++ S EG F
Sbjct: 668 QSGIQDDKDSELSKFLYDARRFVLNNRHLAETAPLQLYSSGLMF--SPEGSITR-RIFNY 724
Query: 304 VLATFTQYSRLRVIAELRHGDLFHAANIISSIEFDRDDELFASAGVSRRIKIFE-FSSVV 362
L+ ++Q ++ L + + S+ F D + S +KI++ + +
Sbjct: 725 NLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGEL 784
Query: 363 NEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEK 422
+ D H VE L+++ K L+AS YD + +WD T + + +E H
Sbjct: 785 LQTLDGHSGTVES--------LAFSPDGK-LLASGSYDNTIDLWDSATGELLQTFEGHPH 835
Query: 423 RAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLS 482
WSV F+ + L S SDD I +DL + + H ++V V F
Sbjct: 836 SIWSVAFA-PDGKELASASDDST-------IKIWDLAT-GELQQTLDSHSQSVRSVAFSP 886
Query: 483 NNEL-ASASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYH 541
+ +L AS+S DS++++W+ + G + V + + + +A GSE N V +++
Sbjct: 887 DGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWN 946
Query: 542 KA 543
A
Sbjct: 947 PA 948
Score = 133 (51.9 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 53/216 (24%), Positives = 102/216 (47%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
I S+ F D + ASA IKI++ ++ E + ++ ++S S ++++ K
Sbjct: 837 IWSVAFAPDGKELASASDDSTIKIWDLAT--GELQQT----LDSHSQSVRS-VAFSPDGK 889
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
L+ASS D + +W+ T + E SV FS + L SGS+ +
Sbjct: 890 -LLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFS-PDGKKLASGSEK-------N 940
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTFR 510
+ ++ + L GH ++V V F + +LAS+S+D++++LW+ TF+
Sbjct: 941 TVKLWNPAT-GELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFK 999
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
GH V + + +++ GS+ N + ++ A S+
Sbjct: 1000 GHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSE 1035
>TAIR|locus:2139489 [details] [associations]
symbol:AGB1 "AT4G34460" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS;IDA;IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0010154 "fruit development" evidence=IMP]
[GO:0072593 "reactive oxygen species metabolic process"
evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=RCA;IMP] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA;IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0009845
"seed germination" evidence=IEP;IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0009723 "response to ethylene stimulus"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IMP] [GO:0048527 "lateral root development"
evidence=RCA;IMP] [GO:0009991 "response to extracellular stimulus"
evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0048193 "Golgi vesicle transport" evidence=RCA] [GO:0051707
"response to other organism" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005783
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009738 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0048527 GO:GO:0009817
GO:GO:0009845 GO:GO:0009887 GO:GO:0009788 GO:GO:0004871
GO:GO:0009991 GO:GO:0072593 GO:GO:0010154 EMBL:AL161585
GO:GO:0030968 EMBL:AL023094 GO:GO:0009867 PRINTS:PR00319
GO:GO:0080008 GO:GO:0005834 HOGENOM:HOG000176356 KO:K04536
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:GACDATS EMBL:U12232
IPI:IPI00545688 PIR:T05266 RefSeq:NP_195172.1 UniGene:At.22855
ProteinModelPortal:P49177 SMR:P49177 DIP:DIP-40108N IntAct:P49177
STRING:P49177 PaxDb:P49177 PRIDE:P49177 EnsemblPlants:AT4G34460.1
GeneID:829597 KEGG:ath:AT4G34460 GeneFarm:2858 TAIR:At4g34460
InParanoid:P49177 PhylomeDB:P49177 ProtClustDB:CLSN2685906
Genevestigator:P49177 Uniprot:P49177
Length = 377
Score = 157 (60.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 59/223 (26%), Positives = 99/223 (44%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPT--RSKLSCLSW-NK 388
+ + F + + A G+ IF SS + +D P+ M T R +SC +
Sbjct: 110 VMTCAFSPNGQSVACGGLDSVCSIFSLSSTAD--KDGTVPVSRMLTGHRGYVSCCQYVPN 167
Query: 389 YTKNLIASSDYDGIVTIWDVTTS--QSVM--EYEE-HEKRAWSVDFSCTEPSMLVSGSDD 443
+LI SS D +WDVTT SV E++ H SV S + P+ +SGS
Sbjct: 168 EDAHLITSSG-DQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGS-- 224
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKE 502
C D +D R S+ + F+GH+ V+ VKF + + S D + RL+D++
Sbjct: 225 C-----DSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRT 279
Query: 503 NLPLHTFRGHTNEKN----FVGLTVNNEYIACG-SETNEVFVY 540
L ++ H + +N + +V+ + G + N +V+
Sbjct: 280 GHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVW 322
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 136 (52.9 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 40 LCPICKQLMTDAFMTACGHSFCYTCIFTHLRNKSDCPCCGCHL-TCKHIFP 89
+CPIC ++ +A+MT CGHSFCY CI L + + CP C + H++P
Sbjct: 40 VCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYP 90
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 155 (59.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 51/164 (31%), Positives = 79/164 (48%)
Query: 383 CLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
C+++N NLI S +D + IW+V T + V + H SV F+ + S++VS S
Sbjct: 133 CVNFNP-PSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFN-RDGSLIVSASH 190
Query: 443 D--CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAST-DSSLRLWD 499
D CK+ A L + P AVS+ KF N + +T DS+L+L +
Sbjct: 191 DGSCKIWDAKEGTCLKTLIDDKSP---------AVSFAKFSPNGKFILVATLDSTLKLSN 241
Query: 500 VKENLPLHTFRGHTNEKNFV--GLTVNN-EYIACGSETNEVFVY 540
L + GHTN+ + +V N +YI GSE N V+++
Sbjct: 242 YATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLW 285
Score = 137 (53.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 43/150 (28%), Positives = 67/150 (44%)
Query: 369 HYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKR----A 424
H +E T + +SC+ ++ NL+AS+ D + +W T + YE H A
Sbjct: 35 HLKTLEGHTAA-ISCVKFSN-DGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLA 92
Query: 425 WSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLS-N 483
WS D T S SDDC + +D R+ + L V GH V V F +
Sbjct: 93 WSSDSHYT-----CSASDDCT-------LRIWDARSPYECLKVLRGHTNFVFCVNFNPPS 140
Query: 484 NELASASTDSSLRLWDVKENLPLHTFRGHT 513
N + S S D ++R+W+VK + + H+
Sbjct: 141 NLIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 54/205 (26%), Positives = 92/205 (44%)
Query: 327 HAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSW 386
H A IS ++F D L ASA V + + ++ S N +H E + S +S L+W
Sbjct: 42 HTA-AISCVKFSNDGNLLASASVDKTMILW---SATNYSL-IH--RYEGHS-SGISDLAW 93
Query: 387 NKYTKNLIASSDYDGIVTIWDVTTSQSVMEY-EEHEKRAWSVDFSCTEPSMLVSGSDDCK 445
+ + ++SD D + IWD + ++ H + V+F+ PS L+
Sbjct: 94 SSDSHYTCSASD-DCTLRIWDARSPYECLKVLRGHTNFVFCVNFN--PPSNLIVS----- 145
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKENL 504
GS D I ++++ + + + H +S V F + L SAS D S ++WD KE
Sbjct: 146 -GSFDETIRIWEVKT-GKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGT 203
Query: 505 PLHTFRGHTNEK-NFVGLTVNNEYI 528
L T + +F + N ++I
Sbjct: 204 CLKTLIDDKSPAVSFAKFSPNGKFI 228
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 171 (65.3 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 44/153 (28%), Positives = 71/153 (46%)
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
+N + SS DG V +W + T ++ Y+ H W FS VSG D ++ +
Sbjct: 553 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLWA 611
Query: 449 ADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLH 507
DH+ QPL +F GH V+ +F N N +A+ S D ++RLWDV +
Sbjct: 612 TDHY----------QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 661
Query: 508 TFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
F GH + + + N ++A G+ V ++
Sbjct: 662 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 694
Score = 135 (52.6 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 38/143 (26%), Positives = 63/143 (44%)
Query: 396 SSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHY 455
S +D + +W Q + + H D +CT S+ GSAD +
Sbjct: 600 SGGHDRVARLWATDHYQPLRIFAGH-----LADVNCTR---FHPNSNYVATGSADRTVRL 651
Query: 456 YDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTFRGHTN 514
+D+ N + +F GHK + + F N LA+ +TD + LWD+ L + +GHT+
Sbjct: 652 WDVLN-GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 710
Query: 515 EKNFVGLTVNNEYIACGSETNEV 537
+ + + E +A GS N V
Sbjct: 711 TVCSLRFSRDGEILASGSMDNTV 733
Score = 39 (18.8 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 392 NLIASSDYDGIVTIWDVT 409
+LIA D V +W VT
Sbjct: 481 SLIAGGFADSTVRVWSVT 498
Score = 37 (18.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 113 EHLRLALQQGCEVSVKELDGLLSLLVAKKRK 143
EHL + + G S +++D ++ L + ++
Sbjct: 333 EHLYIDIFDGMPRSKQQIDAMVGSLAGEAKR 363
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 171 (65.3 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 44/153 (28%), Positives = 71/153 (46%)
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
+N + SS DG V +W + T ++ Y+ H W FS VSG D ++ +
Sbjct: 555 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLWA 613
Query: 449 ADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLH 507
DH+ QPL +F GH V+ +F N N +A+ S D ++RLWDV +
Sbjct: 614 TDHY----------QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 663
Query: 508 TFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
F GH + + + N ++A G+ V ++
Sbjct: 664 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 696
Score = 135 (52.6 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 38/143 (26%), Positives = 63/143 (44%)
Query: 396 SSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHY 455
S +D + +W Q + + H D +CT S+ GSAD +
Sbjct: 602 SGGHDRVARLWATDHYQPLRIFAGH-----LADVNCTR---FHPNSNYVATGSADRTVRL 653
Query: 456 YDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTFRGHTN 514
+D+ N + +F GHK + + F N LA+ +TD + LWD+ L + +GHT+
Sbjct: 654 WDVLN-GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 712
Query: 515 EKNFVGLTVNNEYIACGSETNEV 537
+ + + E +A GS N V
Sbjct: 713 TVCSLRFSRDGEILASGSMDNTV 735
Score = 39 (18.8 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 392 NLIASSDYDGIVTIWDVT 409
+LIA D V +W VT
Sbjct: 483 SLIAGGFADSTVRVWSVT 500
Score = 37 (18.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 113 EHLRLALQQGCEVSVKELDGLLSLLVAKKRK 143
EHL + + G S +++D ++ L + ++
Sbjct: 335 EHLYIDIFDGMPRSKQQIDAMVGSLAGEAKR 365
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 171 (65.3 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 44/153 (28%), Positives = 71/153 (46%)
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
+N + SS DG V +W + T ++ Y+ H W FS VSG D ++ +
Sbjct: 555 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLWA 613
Query: 449 ADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLH 507
DH+ QPL +F GH V+ +F N N +A+ S D ++RLWDV +
Sbjct: 614 TDHY----------QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 663
Query: 508 TFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
F GH + + + N ++A G+ V ++
Sbjct: 664 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 696
Score = 135 (52.6 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 38/143 (26%), Positives = 63/143 (44%)
Query: 396 SSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHY 455
S +D + +W Q + + H D +CT S+ GSAD +
Sbjct: 602 SGGHDRVARLWATDHYQPLRIFAGH-----LADVNCTR---FHPNSNYVATGSADRTVRL 653
Query: 456 YDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTFRGHTN 514
+D+ N + +F GHK + + F N LA+ +TD + LWD+ L + +GHT+
Sbjct: 654 WDVLN-GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 712
Query: 515 EKNFVGLTVNNEYIACGSETNEV 537
+ + + E +A GS N V
Sbjct: 713 TVCSLRFSRDGEILASGSMDNTV 735
Score = 39 (18.8 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 392 NLIASSDYDGIVTIWDVT 409
+LIA D V +W VT
Sbjct: 483 SLIAGGFADSTVRVWSVT 500
Score = 37 (18.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 113 EHLRLALQQGCEVSVKELDGLLSLLVAKKRK 143
EHL + + G S +++D ++ L + ++
Sbjct: 335 EHLYIDIFDGMPRSKQQIDAMVGSLAGEAKR 365
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 171 (65.3 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 44/153 (28%), Positives = 71/153 (46%)
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
+N + SS DG V +W + T ++ Y+ H W FS VSG D ++ +
Sbjct: 556 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLWA 614
Query: 449 ADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLH 507
DH+ QPL +F GH V+ +F N N +A+ S D ++RLWDV +
Sbjct: 615 TDHY----------QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 664
Query: 508 TFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
F GH + + + N ++A G+ V ++
Sbjct: 665 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 697
Score = 135 (52.6 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 38/143 (26%), Positives = 63/143 (44%)
Query: 396 SSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHY 455
S +D + +W Q + + H D +CT S+ GSAD +
Sbjct: 603 SGGHDRVARLWATDHYQPLRIFAGH-----LADVNCTR---FHPNSNYVATGSADRTVRL 654
Query: 456 YDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTFRGHTN 514
+D+ N + +F GHK + + F N LA+ +TD + LWD+ L + +GHT+
Sbjct: 655 WDVLN-GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 713
Query: 515 EKNFVGLTVNNEYIACGSETNEV 537
+ + + E +A GS N V
Sbjct: 714 TVCSLRFSRDGEILASGSMDNTV 736
Score = 39 (18.8 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 392 NLIASSDYDGIVTIWDVT 409
+LIA D V +W VT
Sbjct: 484 SLIAGGFADSTVRVWSVT 501
Score = 37 (18.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 113 EHLRLALQQGCEVSVKELDGLLSLLVAKKRK 143
EHL + + G S +++D ++ L + ++
Sbjct: 336 EHLYIDIFDGMPRSKQQIDAMVGSLAGEAKR 366
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 159 (61.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 51/201 (25%), Positives = 88/201 (43%)
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L++ S+ D + WD+ + + + Y+ H W +D S P L S S DH
Sbjct: 354 LLSCSE-DTSIRYWDLESFTNTVLYQGHAYPVWDLDIS---PHSLFFAS-----ASYDHT 404
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLHTFRG 511
+ + PL ++ GH V VKF N N LA+ STD ++RLW ++ + F G
Sbjct: 405 ARLWSFDR-TYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTG 463
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDADHVDDDMGSYFISA 571
H + + N +Y+ E + ++ A S G H DD I++
Sbjct: 464 HCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLA-SGTLYKDLHG----HTDD------ITS 512
Query: 572 VCWKSDSPTMLTANRKGAIKV 592
V + DS + +A+ ++++
Sbjct: 513 VTFSLDSSVIASASMDNSVRI 533
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 153 (58.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 57/209 (27%), Positives = 96/209 (45%)
Query: 334 SIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYTKN 392
++ F D + A+ ++ IF S E Y + TR K + ++++ K
Sbjct: 111 TLAFSPDSQYLATGTHMGKVNIFGVESGKKE-----Y---SLDTRGKFILSIAYSPDGKY 162
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L AS DGI+ I+D+ T + + E H S+ FS + +LV+ SDD G +
Sbjct: 163 L-ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDD---G----Y 213
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTFRG 511
I YD+++ + +GH V V F ++ S+S+D S+++WDV +HTF
Sbjct: 214 IKIYDVQHANLA-GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFD 272
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H ++ V N I + E+ VY
Sbjct: 273 HQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 167 (63.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 46/165 (27%), Positives = 81/165 (49%)
Query: 378 RSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSML 437
+ +++C+ W+ T +L+AS D IW++ S V + EH K +++ +S T P
Sbjct: 448 QGEVNCVKWDP-TGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTN 506
Query: 438 VSGSDDCKVGSA--DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSS 494
+ + + SA D + +D + + L FNGH++ V + F N E +AS S D S
Sbjct: 507 -NPNKQLTLASASFDSTVKLWDAE-LGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKS 564
Query: 495 LRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFV 539
+ +W +KE + T+ G+ N+ AC ++ N V V
Sbjct: 565 IHIWSIKEGKIVKTYTGNGGIFEVCWNKEGNKIAACFAD-NSVCV 608
Score = 37 (18.1 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 127 VKELDGLLSLLVAKKRKLEQE 147
VKEL +L K+R +E+E
Sbjct: 91 VKELQDMLREKKRKERDMEKE 111
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 155 (59.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 55/206 (26%), Positives = 95/206 (46%)
Query: 343 LFASAGVSRRIKIFEFSSVVNEPRDVHY-PMVEMPTRSKLSC-LSWNKYTKNLIASSDYD 400
+ A+ S + IF+++ + P+D + P++++ +K LSWN + LI S+ D
Sbjct: 135 IIATKSPSADVYIFDYTKYPSVPKDNTFNPLLKLKGHTKEGYGLSWNPNKEGLILSASDD 194
Query: 401 GIVTIWDVTTSQSV---MEYEE----HEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHI 453
V WD+ + ++ E HE V + + S DD K +
Sbjct: 195 QTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGVFGSVGDDKK-------L 247
Query: 454 HYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE-NLPLHTFR 510
+DLR + P H + H V+ + F +E LA+ S D ++ LWD++ L LH+F
Sbjct: 248 LIWDLRT-NVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRLKLHSFE 306
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNE 536
H +E V + +NE I S T++
Sbjct: 307 SHRDEIFQVQWSPHNETILASSGTDK 332
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 33/121 (27%), Positives = 57/121 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
++W+ + S D + IWD+ T+ + H + F+ +L +GS
Sbjct: 228 VAWHVLHDGVFGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNCLAFNPYSEFILATGS-- 285
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVK 501
AD + +DLRN+ LH F H+ + V++ +NE LAS+ TD L +WD+
Sbjct: 286 -----ADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLS 340
Query: 502 E 502
+
Sbjct: 341 K 341
Score = 120 (47.3 bits), Expect = 0.00044, P = 0.00044
Identities = 38/166 (22%), Positives = 71/166 (42%)
Query: 398 DYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYD 457
DY ++ T +++ + H K + + ++ + +++S SDD V D + +
Sbjct: 149 DYTKYPSVPKDNTFNPLLKLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINGNA-G 207
Query: 458 LRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDVKENLPLHTFRGHTNE 515
+ +F GH+ V V + L + S D L +WD++ N+P H H+ E
Sbjct: 208 ANGELKAREIFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLRTNVPGHAIDAHSAE 267
Query: 516 KNFVGLTVNNEYI-ACGSETNEVFVYHKAISKPAASHRFGSDADHV 560
N + +E+I A GS V ++ + H F S D +
Sbjct: 268 VNCLAFNPYSEFILATGSADKTVALWDLRNLR-LKLHSFESHRDEI 312
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 154 (59.3 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 51/204 (25%), Positives = 90/204 (44%)
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSA 449
+ L++ S+ D + WD+ + + + Y+ H W VD S P L S GS
Sbjct: 354 SSGLLSCSE-DMSIRYWDLGSFTNTVLYQGHAYPVWDVDIS---PYSLYFAS-----GSH 404
Query: 450 DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLHT 508
D + + PL ++ GH V VKF N N LA+ STD ++RLW ++ +
Sbjct: 405 DRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRL 463
Query: 509 FRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDADHVDDDMGSYF 568
F GH + + N +Y+A E + ++ A + F H D+
Sbjct: 464 FTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA-----SGTLFKELRGHTDN------ 512
Query: 569 ISAVCWKSDSPTMLTANRKGAIKV 592
I+++ + DS + +A+ +++V
Sbjct: 513 ITSLTFSPDSSLIASASMDNSVRV 536
Score = 124 (48.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 45/161 (27%), Positives = 69/161 (42%)
Query: 399 YDG-IVTIWDVTTSQSVMEYEE--HEK--RAWSVDFSCTEPSMLVSG--SD-DC------ 444
Y G +WDV S + + H++ R WS F T P + +G +D DC
Sbjct: 380 YQGHAYPVWDVDISPYSLYFASGSHDRTARLWS--FDRTYPLRIYAGHLADVDCVKFHPN 437
Query: 445 ----KVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWD 499
GS D + + + + +F GH+ V + F N + LASA D L+LWD
Sbjct: 438 SNYLATGSTDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 496
Query: 500 VKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
+ RGHT+ + + ++ IA S N V V+
Sbjct: 497 LASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVW 537
Score = 49 (22.3 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 103 RQVANAASPIEH-LRL---ALQQGCEVSVKELDGLLSLLVAKKRKLEQEEAETNMQILLN 158
RQ +A P++ LRL A + ++V+ G +++ A + E ++ E L N
Sbjct: 20 RQYGDADGPLKQGLRLSQSAEEMAANLAVQSESGCANIVSAAPCQAEPQQYEVQFGRLRN 79
Query: 159 FL 160
FL
Sbjct: 80 FL 81
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 152 (58.6 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 42/131 (32%), Positives = 63/131 (48%)
Query: 386 WNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCK 445
W+ + AS+ D + IWDV T+ + H+ S D+ ++LV+G+ DC
Sbjct: 163 WSPHIPGCFASASGDQTLRIWDVKTTGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCS 222
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDV-KE 502
+ +DLRN+ QP+ GH A+ VKF + LAS S D ++R W+ K
Sbjct: 223 LRG-------WDLRNVRQPVFELLGHTYAIRRVKFSPFYASVLASCSYDFTVRFWNFSKP 275
Query: 503 NLPLHTFRGHT 513
N L T HT
Sbjct: 276 NPLLETVEHHT 286
Score = 138 (53.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 36/122 (29%), Positives = 63/122 (51%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSD 442
++W++ ++++ + DG + +WD + ++ Y+EH + +SVD+S T LV
Sbjct: 73 VTWSENNEHVLVTCSGDGSLQLWDTAGAAGPLQVYKEHTQEVYSVDWSQTRGEQLVVS-- 130
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE---LASASTDSSLRLWD 499
GS D + +D + + L F GH+ + Y S + ASAS D +LR+WD
Sbjct: 131 ----GSWDQTVKLWD-PTVGRSLCTFKGHESII-YSTIWSPHIPGCFASASGDQTLRIWD 184
Query: 500 VK 501
VK
Sbjct: 185 VK 186
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 152 (58.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 46/159 (28%), Positives = 75/159 (47%)
Query: 386 WNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCK 445
W+ + AS+ D + IWDV T+ + H+ S D+ ++LV+G+ DC
Sbjct: 158 WSPHIPGCFASASGDQTLRIWDVKTTGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCS 217
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDVKEN 503
+ +DLRN+ QP+ GH A+ VKF + LAS S D ++R W+ +
Sbjct: 218 LRG-------WDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKP 270
Query: 504 LPL-HTFRGHTNEKNFVGLTVNN--EYIACG-SETNEVF 538
PL T HT + L++ + E C ET +++
Sbjct: 271 DPLLETVEHHTEFTCGLDLSLQSPTEVADCSWDETVKIY 309
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSD 442
++W++ ++++ + DG + +WD + ++ Y+EH + +SVD+S T LV
Sbjct: 68 VTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRDEQLVVS-- 125
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE---LASASTDSSLRLWD 499
GS D + +D + L F GH+ + Y S + ASAS D +LR+WD
Sbjct: 126 ----GSWDQTVKVWD-PTVGNSLCTFRGHESVI-YSTIWSPHIPGCFASASGDQTLRIWD 179
Query: 500 VK 501
VK
Sbjct: 180 VK 181
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 152 (58.6 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 50/189 (26%), Positives = 92/189 (48%)
Query: 335 IEFDRDDELFASAG-VSRRIKIFEFSS-----VVNEPR-DVHYPMVEMPTRSKLSCLSWN 387
++F+ + A AG S +K+++ +S ++ PR D P + ++ + ++W+
Sbjct: 108 MQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWS 167
Query: 388 KYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVG 447
K L S DG + ++DV S+ + + E H S+ FS +P +L SGSDD G
Sbjct: 168 PNGKRLACGS-MDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDD---G 223
Query: 448 SADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPL 506
H++ +D + L +GH V V + +A+ S+D ++RLWD+K +
Sbjct: 224 ----HVNMHDAEGKTL-LGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAI 278
Query: 507 HTFRGHTNE 515
T H ++
Sbjct: 279 QTMSNHNDQ 287
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 155 (59.6 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 55/210 (26%), Positives = 99/210 (47%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S++F D + A+A + IK++ S+ + R + Y + + C ++ +
Sbjct: 105 VRSVDFSADGQFLATASEDKSIKVW---SMYRQ-RFL-YSLYRHT--HWVRCAKFSPDGR 157
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
LI S D + IWD T Q V + + A VDF+ PS G+ GS D
Sbjct: 158 -LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFN---PS----GTCIASAGS-DQ 208
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVKENLPLHTFR 510
+ +D+R +++ L + H V+ + F S+N L +AS+D +L++ D+ E ++T +
Sbjct: 209 TVKVWDVR-VNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQ 267
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
GHT V + E A G +V ++
Sbjct: 268 GHTGPVFTVSFSKGGELFASGGADTQVLLW 297
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 152 (58.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 41/131 (31%), Positives = 63/131 (48%)
Query: 386 WNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCK 445
W+ + ASS D + IWDV T+ + H+ S D+ +++V+G+ DC
Sbjct: 163 WSPHIPGCFASSSGDQTLRIWDVKTTGVRIVVPAHQAEILSCDWCKYNENLVVTGAVDCS 222
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDVKEN 503
+ +DLRN+ QP+ GH A+ VKF + LAS S D ++R W+ +
Sbjct: 223 LRG-------WDLRNVQQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKP 275
Query: 504 LPL-HTFRGHT 513
PL T HT
Sbjct: 276 DPLLETVEHHT 286
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 34/122 (27%), Positives = 63/122 (51%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSD 442
++W++ ++++ + DG + +WD + ++ ++EH + +SVD+S T LV
Sbjct: 73 VTWSENNEHVLVTCSGDGSLQLWDTARATGPLQVFKEHTQEVYSVDWSQTRGEQLVVS-- 130
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE---LASASTDSSLRLWD 499
GS D + +D + + L F GH+ + Y S + AS+S D +LR+WD
Sbjct: 131 ----GSWDQTVKLWD-PTVGKSLCTFRGHESVI-YSTIWSPHIPGCFASSSGDQTLRIWD 184
Query: 500 VK 501
VK
Sbjct: 185 VK 186
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 154 (59.3 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 47/159 (29%), Positives = 76/159 (47%)
Query: 383 CLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
C ++ + ++++SD D V +WD T+ + + Y EH VDF PS G+
Sbjct: 150 CAKFSPDGRLIVSASD-DKTVKLWDKTSRECIHSYCEHGGFVTYVDF---HPS----GTC 201
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVK 501
G D+ + +D R + L + H AV+ + F S N L +AS+DS+L++ D+
Sbjct: 202 IAAAGM-DNTVKVWDART-HRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLM 259
Query: 502 ENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
E L+T GH V + EY A G +V V+
Sbjct: 260 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 119 (46.9 bits), Expect = 0.00054, P = 0.00054
Identities = 44/186 (23%), Positives = 76/186 (40%)
Query: 378 RSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSML 437
R ++C+ ++ TK+L AS D + IW + + H+ V+FS PS
Sbjct: 19 RDAVTCVDFSLNTKHL-ASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS---PSGH 74
Query: 438 VSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLR 496
+ S GS D + + + N+ VF H V V F S+ + L +AS D +++
Sbjct: 75 LLAS-----GSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK 128
Query: 497 LWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASH-RFGS 555
+W L + H N + + I S+ V ++ K + S+ G
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGG 188
Query: 556 DADHVD 561
+VD
Sbjct: 189 FVTYVD 194
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 54/216 (25%), Positives = 102/216 (47%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S++F D + +A + IK++ S+ + R + Y + + C ++ +
Sbjct: 105 VRSVDFSADGQFLVTASEDKSIKVW---SMYRQ-RFL-YSLYRHT--HWVRCAKFSPDGR 157
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
LI S D + IWD T+ Q V + + A VDFS P+ G+ GS DH
Sbjct: 158 -LIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFS---PN----GTCIASAGS-DH 208
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVKENLPLHTFR 510
+ +D+R +++ L + H V+ + F S N L +AS+D ++++ D+ E ++T +
Sbjct: 209 AVRIWDIR-MNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQ 267
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
GHT V + + E G +V V+ + ++
Sbjct: 268 GHTGPVFTVSFSKDGELFTSGGADAQVLVWRTSFNQ 303
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 155 (59.6 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 54/210 (25%), Positives = 96/210 (45%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S++F D + A+A + IK++ N R + T + C ++ +
Sbjct: 105 VRSVDFSADGQFLATASEDKSIKVW------NMYRQRFLYSLYRHTHW-VRCAKFSPDGR 157
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
LI S D + IWD T Q V + + A VDF+ P+ G+ GS DH
Sbjct: 158 -LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFN---PN----GTCIASAGS-DH 208
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVKENLPLHTFR 510
+ +D+R +++ L + H V+ V F S N + +AS+D +L++ D+ E ++T +
Sbjct: 209 TVKIWDIR-VNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQ 267
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
GHT V + E + G +V ++
Sbjct: 268 GHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 151 (58.2 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 57/209 (27%), Positives = 96/209 (45%)
Query: 334 SIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYTKN 392
++ F D + A+ ++ IF S E Y + TR K + ++++ K
Sbjct: 111 TLAFSPDSQYLATGTHVGKVNIFGVESGKKE-----Y---SLDTRGKFILSIAYSPDGKY 162
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L AS DGI+ I+D+ T + + E H S+ FS + +LV+ SDD G +
Sbjct: 163 L-ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDD---G----Y 213
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTFRG 511
I YD+++ + +GH V V F ++ S+S+D S+++WDV +HTF
Sbjct: 214 IKIYDVQHANLA-GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 272
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H ++ V N I + E+ VY
Sbjct: 273 HQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 151 (58.2 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 57/209 (27%), Positives = 96/209 (45%)
Query: 334 SIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYTKN 392
++ F D + A+ ++ IF S E Y + TR K + ++++ K
Sbjct: 111 TLAFSPDSQHLATGTHMGKVNIFGVESGKKE-----Y---SLDTRGKFILSIAYSPDGKY 162
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L AS DGI+ I+D+ T + + E H S+ FS + +LV+ SDD G +
Sbjct: 163 L-ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDD---G----Y 213
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTFRG 511
I YD+++ + +GH V V F ++ S+S+D S+++WDV +HTF
Sbjct: 214 IKIYDVQHANLA-GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFD 272
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H ++ V N I + E+ VY
Sbjct: 273 HQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 168 (64.2 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 43/153 (28%), Positives = 71/153 (46%)
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
+N + SS DG V +W + T ++ Y+ H W FS VSG D ++ +
Sbjct: 556 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS-PYGYYFVSGGHDRVARLWA 614
Query: 449 ADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLH 507
DH+ QPL +F GH V+ ++ N N +A+ S D ++RLWDV +
Sbjct: 615 TDHY----------QPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVR 664
Query: 508 TFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
F GH + + + N ++A G+ V ++
Sbjct: 665 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 697
Score = 134 (52.2 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 38/143 (26%), Positives = 63/143 (44%)
Query: 396 SSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHY 455
S +D + +W Q + + H D +CT S+ GSAD +
Sbjct: 603 SGGHDRVARLWATDHYQPLRIFAGH-----LADVNCTRYH---PNSNYVATGSADRTVRL 654
Query: 456 YDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTFRGHTN 514
+D+ N + +F GHK + + F N LA+ +TD + LWD+ L + +GHT+
Sbjct: 655 WDVLN-GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 713
Query: 515 EKNFVGLTVNNEYIACGSETNEV 537
+ + + E +A GS N V
Sbjct: 714 TVCSLRFSRDGEILASGSMDNTV 736
Score = 39 (18.8 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 392 NLIASSDYDGIVTIWDVT 409
+LIA D V +W VT
Sbjct: 484 SLIAGGFADSTVRVWSVT 501
Score = 37 (18.1 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 113 EHLRLALQQGCEVSVKELDGLLSLLVAKKRK 143
EHL + + G S +++D ++ L + ++
Sbjct: 336 EHLYIDIFDGMPRSKQQIDAMVGSLAGEAKR 366
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 150 (57.9 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 334 SIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYTKN 392
++ F D + A+ ++ IF S E Y + TR K + ++++ K
Sbjct: 93 TLAFSPDSQYLATGTHVGKVNIFGVESGKKE-----Y---SLDTRGKFILSIAYSPDGKY 144
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L AS DGI+ I+D+ T + + E H S+ FS + +LV+ SDD G +
Sbjct: 145 L-ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDD---G----Y 195
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTFRG 511
I YD+++ + +GH V V F ++ S+S+D S+++WDV +HTF
Sbjct: 196 IKIYDVQHANLA-GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 254
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H ++ V N I + E+ +Y
Sbjct: 255 HQDQVWGVKYNGNGSKIVSVGDDQEIHIY 283
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 156 (60.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 52/212 (24%), Positives = 92/212 (43%)
Query: 327 HAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSW 386
HA+N+ S + L A+ G R+ ++ +N+P + M S + +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWS----INKPNCI---MSLTGHTSPVESVRL 71
Query: 387 NKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKV 446
N + LI + G + +WD+ ++ + H+ S+DF + SGS D
Sbjct: 72 NT-PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFH-PYGEFVASGSQDT-- 127
Query: 447 GSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLP 505
+I +D+R + GH +AV ++F + + LASA+ D +++LWD+
Sbjct: 128 -----NIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 506 LHTFRGHTNEKNFVGLTVNNEYIACGSETNEV 537
+ F GHT N V N +A GS +
Sbjct: 182 MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 41/169 (24%), Positives = 78/169 (46%)
Query: 379 SKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV 438
S +S L K + L+A+ D V +W + +M H SV + E ++V
Sbjct: 21 SNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIV 79
Query: 439 SGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRL 497
+GS GS I +DL ++ L GHK + + F E +AS S D++++L
Sbjct: 80 AGSQS---GS----IRVWDLE-AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 498 WDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
WD++ + +RGH+ + + + +++A ++ + V ++ K
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Score = 132 (51.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 43/190 (22%), Positives = 82/190 (43%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S+ + +EL + S I++++ E + + M ++ + L ++ Y +
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDL-----EAAKILRTL--MGHKANICSLDFHPYGE 118
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
+AS D + +WD+ V Y H + + FS + L S +DD H
Sbjct: 119 -FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS-PDGKWLASAADD-------H 169
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKENLPLHTFR 510
+ +DL + + F GH V+ V+F N L AS S+D ++R WD+++ +
Sbjct: 170 TVKLWDL-TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIE 228
Query: 511 GHTNEKNFVG 520
G + G
Sbjct: 229 GEPGPVRYAG 238
>CGD|CAL0005164 [details] [associations]
symbol:SOF1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005164 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000210082 KO:K11806
InterPro:IPR007287 Pfam:PF04158 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717685.1 RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9
STRING:Q5A7Q9 GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 154 (59.3 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 44/164 (26%), Positives = 81/164 (49%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
+ +N+ N+IASS D + ++D+ T+ V H K S+ +C + + + +
Sbjct: 225 VKFNQTETNIIASSGSDNSIVLYDIRTNTPV-----H-KVVTSLRNNCITWNPMEAFN-- 276
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVKE 502
G+ DH+ + YD+RN+ + L V+ GH A+ V F + EL + S D ++RLW +
Sbjct: 277 FATGNEDHNGYLYDMRNLQKTLKVYKGHVGAIMDVDFAPTGQELVTGSYDKTIRLWKTLD 336
Query: 503 NLPLHTFRGHTNEKNF-VGLTVNNEYIACGSETNEVFVYHKAIS 545
+ +K F V + +++YI GS+ + V+ S
Sbjct: 337 GRSKDVYHTKRMQKVFSVKYSTDSKYIISGSDDTNLRVWRSDAS 380
>UNIPROTKB|Q5A7Q9 [details] [associations]
symbol:SOF1 "Putative uncharacterized protein SOF1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005164 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000210082 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:AACQ01000051 EMBL:AACQ01000050 RefSeq:XP_717685.1
RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9 STRING:Q5A7Q9
GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 154 (59.3 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 44/164 (26%), Positives = 81/164 (49%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
+ +N+ N+IASS D + ++D+ T+ V H K S+ +C + + + +
Sbjct: 225 VKFNQTETNIIASSGSDNSIVLYDIRTNTPV-----H-KVVTSLRNNCITWNPMEAFN-- 276
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVKE 502
G+ DH+ + YD+RN+ + L V+ GH A+ V F + EL + S D ++RLW +
Sbjct: 277 FATGNEDHNGYLYDMRNLQKTLKVYKGHVGAIMDVDFAPTGQELVTGSYDKTIRLWKTLD 336
Query: 503 NLPLHTFRGHTNEKNF-VGLTVNNEYIACGSETNEVFVYHKAIS 545
+ +K F V + +++YI GS+ + V+ S
Sbjct: 337 GRSKDVYHTKRMQKVFSVKYSTDSKYIISGSDDTNLRVWRSDAS 380
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 160 (61.4 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 61/250 (24%), Positives = 117/250 (46%)
Query: 320 LRHGDLFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVE--MPT 377
L H F + F D + AS+ V I+++++ S + +D+ Y E M
Sbjct: 204 LTHTIKFGKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLK-KDLQYQADESFMMH 262
Query: 378 RSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSML 437
+ C+ +++ ++ ++AS DG + IW + T + ++ H + S+ FS + S L
Sbjct: 263 DDPVLCIDFSRDSE-MLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFS-RDGSQL 320
Query: 438 VSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLR 496
+S S D IH L++ + L F GH V++ F S+ + + +AS+D +++
Sbjct: 321 LSTSFDQTA-----RIH--GLKS-GKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVK 372
Query: 497 LWDVKENLPLHTF------RGHTNEKNFVGL-TVNNEYIACGSETNEVFVYH---KAISK 546
+WD K L TF RG N + L N E+I ++T+ +++ + +
Sbjct: 373 VWDSKTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKTSSIYIMTLQGQVVKS 432
Query: 547 PAASHRFGSD 556
++ +R G D
Sbjct: 433 FSSGNREGGD 442
Score = 39 (18.8 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 31/119 (26%), Positives = 52/119 (43%)
Query: 119 LQQGCEVSVKELDGLLSLL--VAKKRKLEQEEAETNMQILLNFLHCLRKQ------KLEE 170
LQ C+VS+ +D + + + + R + +++ N L L +Q +L E
Sbjct: 30 LQSECQVSLNTVDSVETFISDINSGRWDSVLPQVSQLKLPRNKLEDLYEQIVLEMIELRE 89
Query: 171 LNEIQADLRCIEEDVYAVEKHK-IELYRARGRCLAKLRTFDDFTA---SKKTDEKAQIS 225
L+ +A LR + V V K + E Y L + FD A S K ++AQI+
Sbjct: 90 LDTARAILR--QTQVMGVMKQEQAERYLRMEHLLVR-SYFDPHEAYGDSTKERKRAQIA 145
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 47/159 (29%), Positives = 77/159 (48%)
Query: 383 CLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
C ++ + ++++SD D V +WD ++ + V Y EH VDF PS G+
Sbjct: 112 CAKFSPDGRLIVSASD-DKTVKLWDKSSRECVHSYCEHGGFVTYVDF---HPS----GTC 163
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVK 501
G D+ + +D+R + L + H AV+ + F S N L +AS+DS+L++ D+
Sbjct: 164 IAAAGM-DNTVKVWDVRT-HRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLM 221
Query: 502 ENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
E L+T GH V + EY A G +V V+
Sbjct: 222 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 156 (60.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 52/212 (24%), Positives = 92/212 (43%)
Query: 327 HAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSW 386
HA+N+ S + L A+ G R+ ++ +N+P + M S + +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWS----INKPNCI---MSLTGHTSPVESVRL 71
Query: 387 NKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKV 446
N + LI + G + +WD+ ++ + H+ S+DF + SGS D
Sbjct: 72 NT-PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFH-PYGEFVASGSQDT-- 127
Query: 447 GSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLP 505
+I +D+R + GH +AV ++F + + LASA+ D +++LWD+
Sbjct: 128 -----NIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 506 LHTFRGHTNEKNFVGLTVNNEYIACGSETNEV 537
+ F GHT N V N +A GS +
Sbjct: 182 MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 41/169 (24%), Positives = 78/169 (46%)
Query: 379 SKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV 438
S +S L K + L+A+ D V +W + +M H SV + E ++V
Sbjct: 21 SNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIV 79
Query: 439 SGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRL 497
+GS GS I +DL ++ L GHK + + F E +AS S D++++L
Sbjct: 80 AGSQS---GS----IRVWDLE-AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 498 WDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
WD++ + +RGH+ + + + +++A ++ + V ++ K
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Score = 129 (50.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 41/172 (23%), Positives = 78/172 (45%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S+ + +EL + S I++++ E + + M ++ + L ++ Y +
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDL-----EAAKILRTL--MGHKANICSLDFHPYGE 118
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
+AS D + +WD+ V Y H + + FS + L S +DD H
Sbjct: 119 -FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS-PDGKWLASAADD-------H 169
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKE 502
+ +DL + + F GH V+ V+F N L AS S+D ++R WD+++
Sbjct: 170 TVKLWDL-TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 156 (60.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 52/212 (24%), Positives = 92/212 (43%)
Query: 327 HAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSW 386
HA+N+ S + L A+ G R+ ++ +N+P + M S + +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWS----INKPNCI---MSLTGHTSPVESVRL 71
Query: 387 NKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKV 446
N + LI + G + +WD+ ++ + H+ S+DF + SGS D
Sbjct: 72 NT-PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFH-PYGEFVASGSQDT-- 127
Query: 447 GSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLP 505
+I +D+R + GH +AV ++F + + LASA+ D +++LWD+
Sbjct: 128 -----NIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 506 LHTFRGHTNEKNFVGLTVNNEYIACGSETNEV 537
+ F GHT N V N +A GS +
Sbjct: 182 MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 41/169 (24%), Positives = 78/169 (46%)
Query: 379 SKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV 438
S +S L K + L+A+ D V +W + +M H SV + E ++V
Sbjct: 21 SNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIV 79
Query: 439 SGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRL 497
+GS GS I +DL ++ L GHK + + F E +AS S D++++L
Sbjct: 80 AGSQS---GS----IRVWDLE-AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 498 WDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
WD++ + +RGH+ + + + +++A ++ + V ++ K
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Score = 129 (50.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 41/172 (23%), Positives = 78/172 (45%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S+ + +EL + S I++++ E + + M ++ + L ++ Y +
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDL-----EAAKILRTL--MGHKANICSLDFHPYGE 118
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
+AS D + +WD+ V Y H + + FS + L S +DD H
Sbjct: 119 -FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS-PDGKWLASAADD-------H 169
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKE 502
+ +DL + + F GH V+ V+F N L AS S+D ++R WD+++
Sbjct: 170 TVKLWDL-TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 156 (60.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 52/212 (24%), Positives = 92/212 (43%)
Query: 327 HAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSW 386
HA+N+ S + L A+ G R+ ++ +N+P + M S + +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWS----INKPNCI---MSLTGHTSPVESVRL 71
Query: 387 NKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKV 446
N + LI + G + +WD+ ++ + H+ S+DF + SGS D
Sbjct: 72 NT-PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFH-PYGEFVASGSQDT-- 127
Query: 447 GSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLP 505
+I +D+R + GH +AV ++F + + LASA+ D +++LWD+
Sbjct: 128 -----NIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 506 LHTFRGHTNEKNFVGLTVNNEYIACGSETNEV 537
+ F GHT N V N +A GS +
Sbjct: 182 MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 41/169 (24%), Positives = 78/169 (46%)
Query: 379 SKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV 438
S +S L K + L+A+ D V +W + +M H SV + E ++V
Sbjct: 21 SNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIV 79
Query: 439 SGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRL 497
+GS GS I +DL ++ L GHK + + F E +AS S D++++L
Sbjct: 80 AGSQS---GS----IRVWDLE-AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 498 WDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
WD++ + +RGH+ + + + +++A ++ + V ++ K
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Score = 129 (50.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 41/172 (23%), Positives = 78/172 (45%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S+ + +EL + S I++++ E + + M ++ + L ++ Y +
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDL-----EAAKILRTL--MGHKANICSLDFHPYGE 118
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
+AS D + +WD+ V Y H + + FS + L S +DD H
Sbjct: 119 -FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS-PDGKWLASAADD-------H 169
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKE 502
+ +DL + + F GH V+ V+F N L AS S+D ++R WD+++
Sbjct: 170 TVKLWDL-TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 52/212 (24%), Positives = 92/212 (43%)
Query: 327 HAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSW 386
HA+N+ S + L A+ G R+ ++ +N+P + M S + +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWS----INKPNCI---MSLTGHTSPVESVRL 71
Query: 387 NKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKV 446
N + LI + G + +WD+ ++ + H+ S+DF + SGS D
Sbjct: 72 NT-PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFH-PYGEFVASGSQDT-- 127
Query: 447 GSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLP 505
+I +D+R + GH +AV ++F + + LASA+ D +++LWD+
Sbjct: 128 -----NIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 506 LHTFRGHTNEKNFVGLTVNNEYIACGSETNEV 537
+ F GHT N V N +A GS +
Sbjct: 182 MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 41/169 (24%), Positives = 78/169 (46%)
Query: 379 SKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV 438
S +S L K + L+A+ D V +W + +M H SV + E ++V
Sbjct: 21 SNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIV 79
Query: 439 SGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRL 497
+GS GS I +DL ++ L GHK + + F E +AS S D++++L
Sbjct: 80 AGSQS---GS----IRVWDLE-AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 498 WDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
WD++ + +RGH+ + + + +++A ++ + V ++ K
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Score = 129 (50.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 41/172 (23%), Positives = 78/172 (45%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S+ + +EL + S I++++ E + + M ++ + L ++ Y +
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDL-----EAAKILRTL--MGHKANICSLDFHPYGE 118
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
+AS D + +WD+ V Y H + + FS + L S +DD H
Sbjct: 119 -FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS-PDGKWLASAADD-------H 169
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKE 502
+ +DL + + F GH V+ V+F N L AS S+D ++R WD+++
Sbjct: 170 TVKLWDL-TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 334 SIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYTKN 392
++ F D + A+ ++ IF S E Y + TR K + ++++ K
Sbjct: 111 TLAFSPDSQYLATGTHVGKVNIFGVESGKKE-----Y---SLDTRGKFILSIAYSPDGKY 162
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L AS DGI+ I+D+ T + + E H S+ FS + +LV+ SDD G +
Sbjct: 163 L-ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDD---G----Y 213
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTFRG 511
I YD+++ + +GH V V F ++ S+S+D S+++WDV +HTF
Sbjct: 214 IKIYDVQHANLA-GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 272
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H ++ V N I + E+ +Y
Sbjct: 273 HQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 334 SIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYTKN 392
++ F D + A+ ++ IF S E Y + TR K + ++++ K
Sbjct: 111 TLAFSPDSQYLATGTHVGKVNIFGVESGKKE-----Y---SLDTRGKFILSIAYSPDGKY 162
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L AS DGI+ I+D+ T + + E H S+ FS + +LV+ SDD G +
Sbjct: 163 L-ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDD---G----Y 213
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTFRG 511
I YD+++ + +GH V V F ++ S+S+D S+++WDV +HTF
Sbjct: 214 IKIYDVQHANLA-GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 272
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H ++ V N I + E+ +Y
Sbjct: 273 HQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 52/212 (24%), Positives = 92/212 (43%)
Query: 327 HAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSW 386
HA+N+ S + L A+ G R+ ++ +N+P + M S + +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWS----INKPNCI---MSLTGHTSPVESVRL 71
Query: 387 NKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKV 446
N + LI + G + +WD+ ++ + H+ S+DF + SGS D
Sbjct: 72 NT-PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFH-PYGEFVASGSQDT-- 127
Query: 447 GSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLP 505
+I +D+R + GH +AV ++F + + LASA+ D +++LWD+
Sbjct: 128 -----NIKLWDIRRKGCVFR-YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 506 LHTFRGHTNEKNFVGLTVNNEYIACGSETNEV 537
+ F GHT N V N +A GS +
Sbjct: 182 MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTI 213
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 41/169 (24%), Positives = 78/169 (46%)
Query: 379 SKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV 438
S +S L K + L+A+ D V +W + +M H SV + E ++V
Sbjct: 21 SNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIV 79
Query: 439 SGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRL 497
+GS GS I +DL ++ L GHK + + F E +AS S D++++L
Sbjct: 80 AGSQS---GS----IRVWDLE-AAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 498 WDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
WD++ + +RGH+ + + + +++A ++ + V ++ K
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Score = 129 (50.5 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 41/172 (23%), Positives = 78/172 (45%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S+ + +EL + S I++++ E + + M ++ + L ++ Y +
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDL-----EAAKILRTL--MGHKANICSLDFHPYGE 118
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
+AS D + +WD+ V Y H + + FS + L S +DD H
Sbjct: 119 -FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS-PDGKWLASAADD-------H 169
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKE 502
+ +DL + + F GH V+ V+F N L AS S+D ++R WD+++
Sbjct: 170 TVKLWDL-TAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 51/170 (30%), Positives = 74/170 (43%)
Query: 389 YTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGS 448
+ L+AS+ D V IWD T E H SV FS + +L S SDD V
Sbjct: 389 HDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS-HDSQLLASASDDSTV-- 445
Query: 449 ADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKENLPLH 507
+D S H GH+ V V F ++ L ASAS D ++R+WD ++ H
Sbjct: 446 -----KIWDTGTGSLQ-HTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKH 499
Query: 508 TFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDA 557
T GH++ V + ++ +A S V ++ I + H F DA
Sbjct: 500 TLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWD--IEARSLQHTFDLDA 547
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 54/205 (26%), Positives = 86/205 (41%)
Query: 389 YTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGS 448
+ L+AS+ D V IWD T E H SV FS + +L S SD
Sbjct: 306 HDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS-HDSRLLASASDST---- 360
Query: 449 ADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKENLPLH 507
+ +D S H GH+ V V F +++L ASAS DS++++WD H
Sbjct: 361 ----VKIWDTGTGSLQ-HTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQH 415
Query: 508 TFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDADHVDDDMGSY 567
T GH + V + +++ +A S+ + V ++ + H D V + S+
Sbjct: 416 TLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTG--SLQHTLEGHRDWVRSVIFSH 473
Query: 568 FISAVCWKSDSPTM-LTANRKGAIK 591
+ SD T+ + KG+ K
Sbjct: 474 DSRLLASASDDRTVRIWDTEKGSHK 498
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 50/181 (27%), Positives = 78/181 (43%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSS-VVNEPRDVHYPMVEMPTRSKLSCLSWNKYT 390
+ S+ F D +L ASA +KI++ + + + H V RS + +
Sbjct: 382 VRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWV----RSVIF-----SHD 432
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGS 448
L+AS+ D V IWD T E H SV FS + +L S SDD ++
Sbjct: 433 SQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS-HDSRLLASASDDRTVRIWD 491
Query: 449 ADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHT 508
+ H + L S + +VS+ + LASAS D ++R+WD++ HT
Sbjct: 492 TEKGSHKHTLEGHSSLV-------TSVSFSH--DSRLLASASNDQTVRIWDIEARSLQHT 542
Query: 509 F 509
F
Sbjct: 543 F 543
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 55/210 (26%), Positives = 98/210 (46%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S++F D + A+A + IK++ S+ + R + Y + + C ++ +
Sbjct: 63 VRSVDFSADGQFLATASEDKSIKVW---SMYRQ-RFL-YSLYRHT--HWVRCAKFSPDGR 115
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
LI S D + IWD T Q V + + A VDF+ PS G+ GS D
Sbjct: 116 -LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFN---PS----GTCIASAGS-DQ 166
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVKENLPLHTFR 510
+ +D+R +++ L + H V+ + F S N L +AS+D +L++ D+ E ++T +
Sbjct: 167 TVKVWDVR-VNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ 225
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
GHT V + E A G +V ++
Sbjct: 226 GHTGPVFTVSFSKGGELFASGGADTQVLLW 255
>MGI|MGI:1914735 [details] [associations]
symbol:Pwp1 "PWP1 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1914735 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:11137
GeneTree:ENSGT00390000017324 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:AK009972 EMBL:AK082158 EMBL:BC003199 EMBL:BC023137
IPI:IPI00320422 RefSeq:NP_598754.2 UniGene:Mm.18834
ProteinModelPortal:Q99LL5 SMR:Q99LL5 IntAct:Q99LL5 STRING:Q99LL5
PhosphoSite:Q99LL5 PaxDb:Q99LL5 PRIDE:Q99LL5
Ensembl:ENSMUST00000001836 GeneID:103136 KEGG:mmu:103136
UCSC:uc007gnc.2 InParanoid:Q99LL5 NextBio:355805 Bgee:Q99LL5
CleanEx:MM_PWP1 Genevestigator:Q99LL5 GermOnline:ENSMUSG00000001785
Uniprot:Q99LL5
Length = 501
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 54/195 (27%), Positives = 87/195 (44%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
LSWNK +N++AS+ D V +WD++ +SV H + ++ F E L+SGS D
Sbjct: 261 LSWNKTVRNVLASASADSTVVLWDLSVGKSVARLTAHTDKVQTLQFHPFEAQTLISGSYD 320
Query: 444 CKVGSADHHIHYYDLRNISQPLHV--FNGHKKAVSYVKFLSNNELASASTDSSLRLWDVK 501
V YD R+ SQ F+G + V++ F + LAS D + D +
Sbjct: 321 KSVA-------LYDCRDPSQNHRQWRFSGQIERVTWNHFSPCHFLASTD-DGFVYNLDAR 372
Query: 502 ENLPLHTFRGHTNEKNFVGLTVNNEYIAC---GSETNEVFVYHKAISKPAASHRFGSDAD 558
+ P+ T H +E + GL ++++ C S V ++ +P+ H
Sbjct: 373 SDKPIFTLNAHNDEIS--GLDLSSQIKGCLVTASADKFVKIWDILGDRPSLIHSR----- 425
Query: 559 HVDDDMGSYFISAVC 573
D MG F S+ C
Sbjct: 426 --DMKMGVLFCSSCC 438
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 63/282 (22%), Positives = 122/282 (43%)
Query: 254 QRVRAQLNDLKEYYLQKRRQSTAQSHKEDEGDLYA-VSREGYHPGL---EDFRSVLATFT 309
+++ A LN L E + A H+++ ++ + +H GL ED ++L T
Sbjct: 56 RQLEALLNQLLENSDDPVPYNFALHHEDETIEIQDNLYTSVFHNGLMKTEDHLTLLYTPQ 115
Query: 310 QYSRLRVIAELRHGDLFHAANIISSIEFD--RDDELFASAGVSRRIKIFEFSSVVNEPRD 367
R+R + H IIS+ +F L +G +F++ + + D
Sbjct: 116 AVFRVRAVTRCTASMNGHDGTIISA-QFSPSTSSRLVTGSG--------DFTARLWDC-D 165
Query: 368 VHYPMVEMPTRSK-LSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVME-YEEHEKRAW 425
P+ M + +SC++W ++IA+ D + WD + + H K
Sbjct: 166 TQTPIATMKGHTNWVSCVAWAP-DASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIM 224
Query: 426 SVDFSCTEPSMLV--SGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN 483
++ C +P L SG GS D+ + ++++ + L +GH ++ V++
Sbjct: 225 AL---CWQPLHLAPDSGPYLLASGSKDNTVRIWNVK-LRTLLFTLSGHTAPITCVRWGGQ 280
Query: 484 NELASASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNN 525
N + S+S D ++R+WD K+ LH +GH N + L+ +
Sbjct: 281 NWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEH 322
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 47/159 (29%), Positives = 77/159 (48%)
Query: 383 CLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
C ++ + ++++SD D V +WD ++ + V Y EH VDF PS G+
Sbjct: 150 CAKFSPDGRLIVSASD-DKTVKLWDKSSRECVHSYCEHGGFVTYVDF---HPS----GTC 201
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVK 501
G D+ + +D+R + L + H AV+ + F S N L +AS+DS+L++ D+
Sbjct: 202 IAAAGM-DNTVKVWDVRT-HRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLM 259
Query: 502 ENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
E L+T GH V + EY A G +V V+
Sbjct: 260 EGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 47/163 (28%), Positives = 77/163 (47%)
Query: 379 SKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV 438
+++ CL++N + L+A+ D +WDV + + V H S+ F+ T
Sbjct: 178 AEIVCLAFNPQS-TLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTT------ 230
Query: 439 SGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRL 497
D GS DH +D+ + + +HV +GH+ +S V+F + L A+AS D S ++
Sbjct: 231 --GDRLVTGSFDHTAILWDVPS-GRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKV 287
Query: 498 WDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSE--TNEVF 538
WD + L T GH +E V + IA S T+ VF
Sbjct: 288 WDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVF 330
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 43/165 (26%), Positives = 69/165 (41%)
Query: 378 RSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSML 437
R ++SC+ +N + +LIA++ D +WD Q + H V F+ T L
Sbjct: 261 RGEISCVQFN-WDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYT--GQL 317
Query: 438 VSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF-LSNNELASASTDSSLR 496
++ SAD + Q L GHK +S V F + + +AS D + R
Sbjct: 318 IA------TASADGTSRVFSTDTF-QCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSR 370
Query: 497 LWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYH 541
+W VK L GH++E + I GS+ N ++H
Sbjct: 371 VWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIWH 415
Score = 119 (46.9 bits), Expect = 0.00057, P = 0.00057
Identities = 39/155 (25%), Positives = 67/155 (43%)
Query: 381 LSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSG 440
L+ +++NK I S YD IWD + + + E H +++ F+ + +G
Sbjct: 95 LTNVAFNKSGSCFITGS-YDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATG 153
Query: 441 SDD--CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRL 497
S D CK+ SA+ +Y F GH + + F + L A+ S D++ +L
Sbjct: 154 SFDKTCKLWSAETGKCFY----------TFRGHTAEIVCLAFNPQSTLVATGSMDTTAKL 203
Query: 498 WDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGS 532
WDV+ + T GH E + + + GS
Sbjct: 204 WDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGS 238
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/210 (26%), Positives = 98/210 (46%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S++F D + A+A + IK++ S+ + R + Y + + C ++ +
Sbjct: 105 VRSVDFSADGQFLATASEDKSIKVW---SMYRQ-RFL-YSLYRHT--HWVRCAKFSPDGR 157
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
LI S D + IWD T Q V + + A VDF+ PS G+ GS D
Sbjct: 158 -LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFN---PS----GTCIASAGS-DQ 208
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVKENLPLHTFR 510
+ +D+R +++ L + H V+ + F S N L +AS+D +L++ D+ E ++T +
Sbjct: 209 TVKVWDVR-VNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ 267
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
GHT V + E A G +V ++
Sbjct: 268 GHTGPVFTVSFSKGGELFASGGADTQVLLW 297
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 50/185 (27%), Positives = 86/185 (46%)
Query: 378 RSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEP--S 435
+SK+ LS++ L + +D D I+ IWD + H W V P S
Sbjct: 209 QSKIRGLSFSPTDLKLASCAD-DKIIKIWDFARCTEDNQLVGH---GWDVKCVSWHPQKS 264
Query: 436 MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSS 494
++VSG D ++I +D ++ SQ + +GHK VS V++ N N + SAS+D
Sbjct: 265 LIVSGGKD-------NNIKIWDAKS-SQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQL 316
Query: 495 LRLWDVKENLPLHTFRGHTNEKNFVGL-TVNNEYIACGSETNEVFVYHKAISKPAASHRF 553
L+++D++ + TF+GH E + L + + G + ++ + +P A
Sbjct: 317 LKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYWIVGNPEPQAEIHS 376
Query: 554 GSDAD 558
DAD
Sbjct: 377 AHDAD 381
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 149 (57.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 45/159 (28%), Positives = 75/159 (47%)
Query: 386 WNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCK 445
W+ + AS+ D + IWDV T+ + H+ S D+ +++V+G+ DC
Sbjct: 158 WSPHIPGCFASASGDQTLRIWDVKTAGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCS 217
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDVKEN 503
+ +DLRN+ QP+ GH A+ VKF + LAS S D ++R W+ +
Sbjct: 218 LRG-------WDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKP 270
Query: 504 LPL-HTFRGHTNEKNFVGLTVNN--EYIACG-SETNEVF 538
PL T HT + L++ + E C ET +++
Sbjct: 271 DPLLETVEHHTEFTCGLDLSLQSPTEVADCSWDETIKIY 309
Score = 138 (53.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSD 442
++W++ ++++ + DG + +WD + ++ Y+EH + +SVD+S T LV
Sbjct: 68 VTWSEDNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVS-- 125
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE---LASASTDSSLRLWD 499
GS D + +D + L F GH+ + Y S + ASAS D +LR+WD
Sbjct: 126 ----GSWDQTVKVWD-PTVGNSLCTFRGHESVI-YSTIWSPHIPGCFASASGDQTLRIWD 179
Query: 500 VK 501
VK
Sbjct: 180 VK 181
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 149 (57.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 46/164 (28%), Positives = 77/164 (46%)
Query: 396 SSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHY 455
S +DG + +WD+ T +S + H K SV FS T+ +VS S D + +
Sbjct: 80 SGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFS-TDNRQIVSASRDRTIKL------W 132
Query: 456 YDLRNISQPLHVFNGHKKAVSYVKFLSNN---ELASASTDSSLRLWDVKENLPL-HTFRG 511
L + +GHK+ VS V+F N + SAS D ++++W++ +N L +T G
Sbjct: 133 NTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL-QNCKLRNTLAG 191
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGS 555
H+ N V ++ + A G + + ++ A K S GS
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS 235
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 46/167 (27%), Positives = 80/167 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDV--TTSQSVME----YEEHEKRAWSVDFSCTEPSML 437
L+W+ + + + S D + +WDV T + V+ YE H+ V + ++
Sbjct: 175 LAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIF 234
Query: 438 VSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSL 495
S DDC+ + +DLR +Q H H++ ++Y+ F NE LA+AS+DS++
Sbjct: 235 GSAGDDCQ-------LVIWDLRT-NQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTV 286
Query: 496 RLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGS-ETNEVFVY 540
L+D+++ PLH H E V N+E + S E + V+
Sbjct: 287 ALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVW 333
Score = 150 (57.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 44/158 (27%), Positives = 79/158 (50%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPM-VEMPTRSKLSCLSWNKYTKNLIASSDYDGIVT 404
S +RI +++ S+ + V PM V +S + ++W+ +N+ S+ D +
Sbjct: 187 SGSQDQRICLWDVSATATDK--VLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLV 244
Query: 405 IWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQP 464
IWD+ T+Q + + HE+ + F+ +L + S D V +DLR ++ P
Sbjct: 245 IWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVA-------LFDLRKLTAP 297
Query: 465 LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDV 500
LHV + H+ V V++ N+E LAS+ D L +WD+
Sbjct: 298 LHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDI 335
Score = 136 (52.9 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 420 HEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVK 479
HE+ + + +S + L+SGS D ++ D D + P+HV+ GH+ + V
Sbjct: 168 HEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATD--KVLNPMHVYEGHQSIIEDVA 225
Query: 480 FLSNNE--LASASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYI-ACGSETNE 536
+ NE SA D L +WD++ N H + H E N++ NE++ A S +
Sbjct: 226 WHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDST 285
Query: 537 VFVY 540
V ++
Sbjct: 286 VALF 289
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 153 (58.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 51/204 (25%), Positives = 89/204 (43%)
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSA 449
+ L++ S+ D + WD+ + + + Y+ H W VD S P L S GS
Sbjct: 354 SSGLLSCSE-DMSIRYWDLGSFTNTVLYQGHAYPVWDVDIS---PFSLYFAS-----GSH 404
Query: 450 DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLHT 508
D + + PL ++ GH V VKF N N LA+ STD ++RLW ++ +
Sbjct: 405 DRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRL 463
Query: 509 FRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDADHVDDDMGSYF 568
F GH + + N +Y+A E + ++ A + F H D
Sbjct: 464 FTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLA-----SGTLFKELRGHTDS------ 512
Query: 569 ISAVCWKSDSPTMLTANRKGAIKV 592
I+++ + DS + +A+ +++V
Sbjct: 513 ITSLAFSPDSGLIASASMDNSVRV 536
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 45/161 (27%), Positives = 69/161 (42%)
Query: 399 YDG-IVTIWDVTTSQSVMEYEE--HEK--RAWSVDFSCTEPSMLVSG--SD-DC------ 444
Y G +WDV S + + H++ R WS F T P + +G +D DC
Sbjct: 380 YQGHAYPVWDVDISPFSLYFASGSHDRTARLWS--FDRTYPLRIYAGHLADVDCVKFHPN 437
Query: 445 ----KVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWD 499
GS D + + + + +F GH+ V + F N + LASA D L+LWD
Sbjct: 438 SNYLATGSTDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWD 496
Query: 500 VKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
+ RGHT+ + + ++ IA S N V V+
Sbjct: 497 LASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVW 537
>ASPGD|ASPL0000009210 [details] [associations]
symbol:AN4226 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 GO:GO:0030529
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158
ProteinModelPortal:C8V4A4 EnsemblFungi:CADANIAT00004434
Uniprot:C8V4A4
Length = 447
Score = 151 (58.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 48/208 (23%), Positives = 106/208 (50%)
Query: 333 SSIEFDRDDELFASAGVSRRIKIFEFSSVVNEP-RDVHYPMVEMPTRSKLSCLSWNKYTK 391
+S+ RD FA++ S +I I++ S + P + +H+P + T ++ +++N+
Sbjct: 157 TSLTHHRDQPFFAAS--SSQISIYDLSRPSSTPSQTLHWP-TSVDT---ITSVAFNQTET 210
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
+++AS+ D + ++D+ TS + + + + +V ++ E + + V + DH
Sbjct: 211 SVLASTGIDRSIILYDLRTSSPLSKLVL-KLASNAVSWNPME-------AFNFAVANEDH 262
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVKENLPLHTFR 510
+++ +D+R +++ L+V H AV V F + EL +AS D ++RLW+ +
Sbjct: 263 NVYMFDMRKMNRALNVLKDHVAAVMDVDFSPTGEELVTASYDRTIRLWNRATGHSRDIYH 322
Query: 511 GHTNEKNFVG-LTVNNEYIACGSETNEV 537
++ F T +N+Y+ GS+ +
Sbjct: 323 TQRMQRVFSAKFTPDNKYVLSGSDDGNI 350
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 40/131 (30%), Positives = 63/131 (48%)
Query: 386 WNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCK 445
W+ + AS+ D + IWDV T+ + H+ S D+ +++V+G+ DC
Sbjct: 158 WSPHIPGCFASASGDQTLRIWDVKTTGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCS 217
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDVKEN 503
+ +DLRN+ QP+ GH A+ VKF + LAS S D ++R W+ +
Sbjct: 218 LRG-------WDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKP 270
Query: 504 LPL-HTFRGHT 513
PL T HT
Sbjct: 271 DPLLETVEHHT 281
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSD 442
++W++ ++++ + DG + +WD + ++ Y+EH + +SVD+S T LV
Sbjct: 68 VTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVS-- 125
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE---LASASTDSSLRLWD 499
GS D + +D + L F GH+ + Y S + ASAS D +LR+WD
Sbjct: 126 ----GSWDQTVKVWD-PTVGNSLCTFRGHESVI-YSTIWSPHIPGCFASASGDQTLRIWD 179
Query: 500 VK 501
VK
Sbjct: 180 VK 181
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/149 (30%), Positives = 74/149 (49%)
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
LIAS+ D V +WD T+ + + + EH A V+F PS G+ G+ D
Sbjct: 160 LIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEF---HPS----GTCIAAAGT-DKT 211
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVKENLPLHTFRG 511
+ +D+R +++ L + H AV+ + F S N L +AS DS+L++ D+ E L+T G
Sbjct: 212 VKVWDVR-MNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHG 270
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H V + ++ A G +V V+
Sbjct: 271 HQGPATCVAFSRTGDFFASGGSDEQVMVW 299
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 152 (58.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 69/265 (26%), Positives = 115/265 (43%)
Query: 281 EDEGDLYAVSREGYHPGLEDFRSVLATFTQYSRLRV----IAELRHGDLFHAANIISSIE 336
E +GDLY + + P + LAT + ++V +++H H +I S ++
Sbjct: 323 EKDGDLY-IRSVCFSPD----GNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYS-LD 376
Query: 337 FDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPM--VEMPTRSKLSCLSWNKYTKNLI 394
+ D S ++ KI++ E + + E+ ++ ++ ++ + + L+
Sbjct: 377 YSSDGRFIVSGSGDKKAKIWDI-----EKGKCAFTLGNEEVGPKNGVTSVAMSPDGR-LV 430
Query: 395 ASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIH 454
A+ D IV +WD T + YE H +SV FS + L SGS D +
Sbjct: 431 AAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFS-PDGKSLASGS-------LDKSLK 482
Query: 455 YYDL---RNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTFR 510
+DL R+ S+ FNGHK V V F + L S S D S++ WD + +
Sbjct: 483 LWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQ 542
Query: 511 GHTNEKNFVGLTV-NNEY--IACGS 532
GH N V L+ NN + A GS
Sbjct: 543 GHKNSVISVALSPKNNSHGVFATGS 567
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 40/131 (30%), Positives = 63/131 (48%)
Query: 386 WNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCK 445
W+ + AS+ D + IWDV ++ + H+ S D+ ++LV+G+ DC
Sbjct: 163 WSPHIPGCFASASGDQTLRIWDVKSTGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCS 222
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDVKEN 503
+ +DLRN+ QP+ GH A+ VKF + LAS S D ++R W+ +
Sbjct: 223 LRG-------WDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKP 275
Query: 504 LPL-HTFRGHT 513
PL T HT
Sbjct: 276 DPLLETVEHHT 286
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 36/122 (29%), Positives = 63/122 (51%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSD 442
++W++ ++++ + DG + +WD + ++ Y+EH + +SVD+S T LV
Sbjct: 73 VTWSENNEHILVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVS-- 130
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE---LASASTDSSLRLWD 499
GS D + +D + + L F GH+ + Y S + ASAS D +LR+WD
Sbjct: 131 ----GSWDQTVKLWD-PTVGKSLCTFRGHESVI-YSTIWSPHIPGCFASASGDQTLRIWD 184
Query: 500 VK 501
VK
Sbjct: 185 VK 186
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 150 (57.9 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 50/210 (23%), Positives = 85/210 (40%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
++ EF D E +AG S + +++ E + + + R + N Y+
Sbjct: 207 VAFCEFSADSEHIVTAGWSGSVAVWKREQCAQEIKFIGHSSQAGCARFHPGAFTQNDYSS 266
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
+ S YDG V +W ++ + E E+H +R V F P+ D
Sbjct: 267 LNVVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAF---HPN-----GHHLATACFDS 318
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELA-SASTDSSLRLWDVKENLPLHTFR 510
YDL + L+ GH K+V+ V F + +A + D R+WD++ +
Sbjct: 319 TWRMYDLTTKKELLYQ-EGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLD 377
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
GHT E + V N + GS N + V+
Sbjct: 378 GHTKEIHSVEWMPNGYEMITGSSDNSMKVW 407
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/140 (23%), Positives = 70/140 (50%)
Query: 394 IASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHI 453
+A++ +D ++D+TT + ++ E H K V F + S+ ++G DC +
Sbjct: 311 LATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFH-PDGSVALTGGHDC-------YG 362
Query: 454 HYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTFRGH 512
+D+R + + +GH K + V+++ N E+ + S+D+S+++WD++ +T H
Sbjct: 363 RVWDMRT-GRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAH 421
Query: 513 TNEKNFVGLTVNNEYIACGS 532
T+ V +Y+ S
Sbjct: 422 TSVVTRVRADAAGQYLVSAS 441
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 149 (57.5 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 47/165 (28%), Positives = 75/165 (45%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDV-----TTSQS-----VMEYEEHEKRAWSVDFSCTE 433
L WN +A+ D ++ +WDV T+S++ + +Y H V F
Sbjct: 188 LCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQFHPQH 247
Query: 434 PSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASAST 491
++L S SDDC + IH L + V H KA++ V N+ LA+AS
Sbjct: 248 EALLASVSDDCTL-----QIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATASA 302
Query: 492 DSSLRLWDVKENLP-LHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
D ++ LWD++ LHT GH +E + + ++E I S T+
Sbjct: 303 DKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTD 347
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 149 (57.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 55/210 (26%), Positives = 94/210 (44%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S++F D + ASA + IK++ N R + T + C ++ +
Sbjct: 105 VRSVDFSADGQFLASASEDKSIKVW------NMYRQRFLYSLYRHTHW-VRCAKFSPDGR 157
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
LI S D + IWD T Q V + + A V F+ P+ G+ GS DH
Sbjct: 158 -LIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFN---PN----GTCIASAGS-DH 208
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVKENLPLHTFR 510
+ +D+R +++ L + H V+ V F S N L +AS+D +L++ D+ E ++T +
Sbjct: 209 TVKIWDIR-VNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ 267
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
GHT V + E G +V ++
Sbjct: 268 GHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 152 (58.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 60/222 (27%), Positives = 95/222 (42%)
Query: 332 ISSIEFDRDDELFASAGVSRR-IKIFEFS-SVVNEPRDV--HYPMVEMPTRSKLSCLSWN 387
+S ++F DD A+AG IKI+ S +N P + E PT L S
Sbjct: 469 MSCLDFS-DDCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGT 527
Query: 388 KYT-------KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSG 440
Y+ K L++ S+ D V +W + T +++ Y+ H W V FS +
Sbjct: 528 VYSTSFSPDNKYLLSGSE-DKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATAS 586
Query: 441 SDD-CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLW 498
D ++ S DH Y PL +F GH V V F N + + S+D + R+W
Sbjct: 587 HDQTARLWSCDH---IY-------PLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMW 636
Query: 499 DVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
DV + F GHT + + + +++ GSE + V+
Sbjct: 637 DVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVW 678
>GENEDB_PFALCIPARUM|PFC0365w [details] [associations]
symbol:PFC0365w "conserved protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016363 "nuclear matrix"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 138 (53.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 45/204 (22%), Positives = 98/204 (48%)
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD 450
+N SS D + + D+ T++++ +++ S P ++ G + + D
Sbjct: 347 ENYFISSSKDSMWILHDLETAKTIKTSKDNPS---SFKHLAIHPDGMMFG-----IAAQD 398
Query: 451 HHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTF 509
+IH YD+++ + NGH K+++ + F N LAS+S D++++LWD+++ T
Sbjct: 399 SNIHIYDIKS-QEYKATLNGHTKSLNCLSFSENGYYLASSSKDNTVKLWDLRKAQSFQTI 457
Query: 510 RGHTNEK-NFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDADHVDDDMGSYF 568
NE NF+ + +Y++ E N++ +Y+ A + + + H D
Sbjct: 458 T--LNETPNFISFDYSGKYLSIAVE-NDIQIYNFETKNQA--NLIKTLSSHTD------I 506
Query: 569 ISAVCWKSDSPTMLTANRKGAIKV 592
++ C+ S + +L+++ IK+
Sbjct: 507 VTQTCFGSTTSYILSSSMDKTIKL 530
Score = 57 (25.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 40 LCPICKQLMTDAFMTACGHSFCYTCIFTHLRNKSDCPCCGCHLTCKHIFP 89
+C I Q + ++ G+ F I H+ N CP G LT + ++P
Sbjct: 4 ICTISGQTPEEPVISKTGYIFEKRLIEKHIINYGICPVSGEVLTLEDLYP 53
>UNIPROTKB|O77325 [details] [associations]
symbol:PFC0365w "PRP19-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016363 "nuclear
matrix" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 138 (53.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 45/204 (22%), Positives = 98/204 (48%)
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD 450
+N SS D + + D+ T++++ +++ S P ++ G + + D
Sbjct: 347 ENYFISSSKDSMWILHDLETAKTIKTSKDNPS---SFKHLAIHPDGMMFG-----IAAQD 398
Query: 451 HHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTF 509
+IH YD+++ + NGH K+++ + F N LAS+S D++++LWD+++ T
Sbjct: 399 SNIHIYDIKS-QEYKATLNGHTKSLNCLSFSENGYYLASSSKDNTVKLWDLRKAQSFQTI 457
Query: 510 RGHTNEK-NFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDADHVDDDMGSYF 568
NE NF+ + +Y++ E N++ +Y+ A + + + H D
Sbjct: 458 T--LNETPNFISFDYSGKYLSIAVE-NDIQIYNFETKNQA--NLIKTLSSHTD------I 506
Query: 569 ISAVCWKSDSPTMLTANRKGAIKV 592
++ C+ S + +L+++ IK+
Sbjct: 507 VTQTCFGSTTSYILSSSMDKTIKL 530
Score = 57 (25.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 40 LCPICKQLMTDAFMTACGHSFCYTCIFTHLRNKSDCPCCGCHLTCKHIFP 89
+C I Q + ++ G+ F I H+ N CP G LT + ++P
Sbjct: 4 ICTISGQTPEEPVISKTGYIFEKRLIEKHIINYGICPVSGEVLTLEDLYP 53
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 150 (57.9 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 50/201 (24%), Positives = 85/201 (42%)
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L++ S+ D V WD+ + + + Y H W VD S P L + S D
Sbjct: 369 LLSCSE-DSTVRYWDLKSFTNTVLYRGHAYPVWDVDVS---PCSLYFST-----ASHDRT 419
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLHTFRG 511
+ + PL ++ GH V VKF N N +A+ STD ++RLW ++ + F G
Sbjct: 420 ARLWSFAR-TYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTG 478
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDADHVDDDMGSYFISA 571
H + + N +Y+A E + ++ A + F H D IS+
Sbjct: 479 HRGPVLTLAFSPNGKYLASAGEDQRLKLWDLA-----SGGLFKDLRGHTDT------ISS 527
Query: 572 VCWKSDSPTMLTANRKGAIKV 592
+ + DS + +A+ ++V
Sbjct: 528 LSFSQDSSLVASASMDNTVRV 548
Score = 132 (51.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 45/154 (29%), Positives = 69/154 (44%)
Query: 405 IWDVTTSQSVMEYE--EHEK--RAWSVDFSCTEPSMLVSG--SD-DC----------KVG 447
+WDV S + + H++ R WS F+ T P L +G SD DC G
Sbjct: 399 VWDVDVSPCSLYFSTASHDRTARLWS--FARTYPLRLYAGHLSDVDCVKFHPNSNYIATG 456
Query: 448 SADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPL 506
S D + + R + +F GH+ V + F N + LASA D L+LWD+
Sbjct: 457 STDKTVRLWSTRQ-GASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLF 515
Query: 507 HTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
RGHT+ + + + ++ +A S N V V+
Sbjct: 516 KDLRGHTDTISSLSFSQDSSLVASASMDNTVRVW 549
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 147 (56.8 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ S+V E + V + + + +SW+ ++L S D + I
Sbjct: 160 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 219
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 220 WD-TRSNNTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 275
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 276 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 314
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 384 LSWN-KYTKNLIASSDYDGIVTIWDVTT---SQSVME----YEEHEKRAWSVDFSCTEPS 435
LSWN + +L+++SD D + +WD++ V++ + H V + S
Sbjct: 148 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 206
Query: 436 MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDS 493
+ S +DD K+ D + N S+P H + H V+ + F +E LA+ S D
Sbjct: 207 LFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADK 261
Query: 494 SLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
++ LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 262 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 304
Score = 120 (47.3 bits), Expect = 0.00040, P = 0.00040
Identities = 40/175 (22%), Positives = 80/175 (45%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
+ LF S +++ I++ S N + H V+ T ++++CLS+N Y++ ++A+ D
Sbjct: 205 ESLFGSVADDQKLMIWDTRSN-NTSKPSH--SVDAHT-AEVNCLSFNPYSEFILATGSAD 260
Query: 401 GIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--------CKVGSADH 451
V +WD+ + + +E H+ + V +S ++L S D K+G
Sbjct: 261 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 320
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
D + L + GH +S + N + S S D+ +++W + EN+
Sbjct: 321 PEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 373
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 145 (56.1 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 49/169 (28%), Positives = 80/169 (47%)
Query: 386 WNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCK 445
WN ++ AS+ D + IWDV S M H+ S D++ + +L + S
Sbjct: 157 WNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSS---- 212
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWD-VKE 502
D + +D+R+ PL V NGH AV VKF + +AS S D S+ LWD + E
Sbjct: 213 ---VDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDYMVE 269
Query: 503 NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNE-VFVYHKAISKPAAS 550
+ + + HT + ++V E + + +E V+V+ + + P AS
Sbjct: 270 DALVGRYDHHTEFAVGIDMSVLVEGLMASTGWDELVYVWQQGMD-PRAS 317
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 146 (56.5 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 44/157 (28%), Positives = 71/157 (45%)
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L+AS D I+D T S+ +H+ SV FS SD G D+
Sbjct: 162 LVASGSDDRSARIFD-TRSKGSTHLFQHKYPVTSVCFS--------DASDQLITGGIDNV 212
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLP----LH 507
I +D+RN PL+ H+ ++ + L S S D+S ++WD++ P +
Sbjct: 213 IRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIK 272
Query: 508 TFRGHTN--EKNFV--GLTVNNEYIACGSETNEVFVY 540
TF G N EKN + +++ I CGS +V+++
Sbjct: 273 TFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIW 309
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 50/211 (23%), Positives = 95/211 (45%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
I S +F+ AS G + I ++ +V E ++Y +++ + L L W+
Sbjct: 65 IYSCKFNSYGTALASGGSDKEIFLW---NVYGEC--INYSVLKGHKGTILE-LHWST-DS 117
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
N I ++ D + +WD + + EH S + P ++ SGSDD SA
Sbjct: 118 NEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDD---RSA-- 172
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVK-ENLPLHTF 509
+D R+ H+F HK V+ V F ++++L + D+ +R+WD++ + PL+T
Sbjct: 173 --RIFDTRSKGST-HLFQ-HKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTL 228
Query: 510 RGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H + ++ + Y+ S N ++
Sbjct: 229 ASHQDTITSTSVSKDGAYLLSNSMDNSCKIW 259
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 149 (57.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 42/155 (27%), Positives = 70/155 (45%)
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSA 449
+ L++ S+ D + WD+ + + + Y+ H W +D S P L S GS
Sbjct: 354 SSGLLSCSE-DMSIRYWDLGSFTNTVLYQGHAYPVWDLDIS---PYSLYFAS-----GSH 404
Query: 450 DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLHT 508
D + + PL ++ GH V VKF N N LA+ STD ++RLW ++ +
Sbjct: 405 DRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRL 463
Query: 509 FRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKA 543
F GH + + N +Y+A E + ++ A
Sbjct: 464 FTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 498
Score = 46 (21.3 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 103 RQVANAASPIEH-LRL---ALQQGCEVSVKELDGLLSLLVAKKRKLEQEEAETNMQILLN 158
RQ ++ P++ LRL A + ++V+ G +++ A + E ++ E L N
Sbjct: 20 RQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSAAPCQAEPQQYEVQFGRLRN 79
Query: 159 FL 160
FL
Sbjct: 80 FL 81
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ S+V E + V + + + +SW+ ++L S D + I
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 255 WD-TRSNNTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 310
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 139 (54.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 47/163 (28%), Positives = 78/163 (47%)
Query: 384 LSWN-KYTKNLIASSDYDGIVTIWDVTT---SQSVME----YEEHEKRAWSVDFSCTEPS 435
LSWN + NL+++SD D + +WD++ V++ + H V + S
Sbjct: 183 LSWNPNLSGNLLSASD-DHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 241
Query: 436 MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDS 493
+ S +DD K+ D + N S+P H + H V+ + F +E LA+ S D
Sbjct: 242 LFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADK 296
Query: 494 SLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
++ LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 297 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 40/175 (22%), Positives = 80/175 (45%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
+ LF S +++ I++ S N + H V+ T ++++CLS+N Y++ ++A+ D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSN-NTSKPSH--SVDAHT-AEVNCLSFNPYSEFILATGSAD 295
Query: 401 GIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--------CKVGSADH 451
V +WD+ + + +E H+ + V +S ++L S D K+G
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 355
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
D + L + GH +S + N + S S D+ +++W + EN+
Sbjct: 356 PEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ S+V E + V + + + +SW+ ++L S D + I
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 255 WD-TRSNNTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 310
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 139 (54.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 47/163 (28%), Positives = 78/163 (47%)
Query: 384 LSWN-KYTKNLIASSDYDGIVTIWDVTT---SQSVME----YEEHEKRAWSVDFSCTEPS 435
LSWN + NL+++SD D + +WD++ V++ + H V + S
Sbjct: 183 LSWNPNLSGNLLSASD-DHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 241
Query: 436 MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDS 493
+ S +DD K+ D + N S+P H + H V+ + F +E LA+ S D
Sbjct: 242 LFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADK 296
Query: 494 SLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
++ LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 297 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 40/175 (22%), Positives = 80/175 (45%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
+ LF S +++ I++ S N + H V+ T ++++CLS+N Y++ ++A+ D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSN-NTSKPSH--SVDAHT-AEVNCLSFNPYSEFILATGSAD 295
Query: 401 GIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--------CKVGSADH 451
V +WD+ + + +E H+ + V +S ++L S D K+G
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 355
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
D + L + GH +S + N + S S D+ +++W + EN+
Sbjct: 356 PEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ S+V E + V + + + +SW+ ++L S D + I
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 255 WD-TRSNNTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 310
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 139 (54.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 47/163 (28%), Positives = 78/163 (47%)
Query: 384 LSWN-KYTKNLIASSDYDGIVTIWDVTT---SQSVME----YEEHEKRAWSVDFSCTEPS 435
LSWN + NL+++SD D + +WD++ V++ + H V + S
Sbjct: 183 LSWNPNLSGNLLSASD-DHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 241
Query: 436 MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDS 493
+ S +DD K+ D + N S+P H + H V+ + F +E LA+ S D
Sbjct: 242 LFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADK 296
Query: 494 SLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
++ LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 297 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 40/175 (22%), Positives = 80/175 (45%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
+ LF S +++ I++ S N + H V+ T ++++CLS+N Y++ ++A+ D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSN-NTSKPSH--SVDAHT-AEVNCLSFNPYSEFILATGSAD 295
Query: 401 GIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--------CKVGSADH 451
V +WD+ + + +E H+ + V +S ++L S D K+G
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 355
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
D + L + GH +S + N + S S D+ +++W + EN+
Sbjct: 356 PEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ S+V E + V + + + +SW+ ++L S D + I
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 255 WD-TRSNNTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 310
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 384 LSWN-KYTKNLIASSDYDGIVTIWDVTT---SQSVME----YEEHEKRAWSVDFSCTEPS 435
LSWN + +L+++SD D + +WD++ V++ + H V + S
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 241
Query: 436 MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDS 493
+ S +DD K+ D + N S+P H + H V+ + F +E LA+ S D
Sbjct: 242 LFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADK 296
Query: 494 SLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
++ LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 297 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 40/175 (22%), Positives = 80/175 (45%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
+ LF S +++ I++ S N + H V+ T ++++CLS+N Y++ ++A+ D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSN-NTSKPSH--SVDAHT-AEVNCLSFNPYSEFILATGSAD 295
Query: 401 GIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--------CKVGSADH 451
V +WD+ + + +E H+ + V +S ++L S D K+G
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 355
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
D + L + GH +S + N + S S D+ +++W + EN+
Sbjct: 356 PEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ S+V E + V + + + +SW+ ++L S D + I
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 255 WD-TRSNNTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 310
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 384 LSWN-KYTKNLIASSDYDGIVTIWDVTT---SQSVME----YEEHEKRAWSVDFSCTEPS 435
LSWN + +L+++SD D + +WD++ V++ + H V + S
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 241
Query: 436 MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDS 493
+ S +DD K+ D + N S+P H + H V+ + F +E LA+ S D
Sbjct: 242 LFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADK 296
Query: 494 SLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
++ LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 297 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 40/175 (22%), Positives = 80/175 (45%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
+ LF S +++ I++ S N + H V+ T ++++CLS+N Y++ ++A+ D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSN-NTSKPSH--SVDAHT-AEVNCLSFNPYSEFILATGSAD 295
Query: 401 GIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--------CKVGSADH 451
V +WD+ + + +E H+ + V +S ++L S D K+G
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 355
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
D + L + GH +S + N + S S D+ +++W + EN+
Sbjct: 356 PEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ S+V E + V + + + +SW+ ++L S D + I
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 255 WD-TRSNNTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 310
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 384 LSWN-KYTKNLIASSDYDGIVTIWDVTT---SQSVME----YEEHEKRAWSVDFSCTEPS 435
LSWN + +L+++SD D + +WD++ V++ + H V + S
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 241
Query: 436 MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDS 493
+ S +DD K+ D + N S+P H + H V+ + F +E LA+ S D
Sbjct: 242 LFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADK 296
Query: 494 SLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
++ LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 297 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 40/175 (22%), Positives = 80/175 (45%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
+ LF S +++ I++ S N + H V+ T ++++CLS+N Y++ ++A+ D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSN-NTSKPSH--SVDAHT-AEVNCLSFNPYSEFILATGSAD 295
Query: 401 GIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--------CKVGSADH 451
V +WD+ + + +E H+ + V +S ++L S D K+G
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 355
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
D + L + GH +S + N + S S D+ +++W + EN+
Sbjct: 356 PEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ S+V E + V + + + +SW+ ++L S D + I
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 255 WD-TRSNNTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 310
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 384 LSWN-KYTKNLIASSDYDGIVTIWDVTT---SQSVME----YEEHEKRAWSVDFSCTEPS 435
LSWN + +L+++SD D + +WD++ V++ + H V + S
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 241
Query: 436 MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDS 493
+ S +DD K+ D + N S+P H + H V+ + F +E LA+ S D
Sbjct: 242 LFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADK 296
Query: 494 SLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
++ LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 297 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 40/175 (22%), Positives = 80/175 (45%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
+ LF S +++ I++ S N + H V+ T ++++CLS+N Y++ ++A+ D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSN-NTSKPSH--SVDAHT-AEVNCLSFNPYSEFILATGSAD 295
Query: 401 GIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--------CKVGSADH 451
V +WD+ + + +E H+ + V +S ++L S D K+G
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 355
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
D + L + GH +S + N + S S D+ +++W + EN+
Sbjct: 356 PEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ S+V E + V + + + +SW+ ++L S D + I
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 255 WD-TRSNNTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 310
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 384 LSWN-KYTKNLIASSDYDGIVTIWDVTT---SQSVME----YEEHEKRAWSVDFSCTEPS 435
LSWN + +L+++SD D + +WD++ V++ + H V + S
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 241
Query: 436 MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDS 493
+ S +DD K+ D + N S+P H + H V+ + F +E LA+ S D
Sbjct: 242 LFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADK 296
Query: 494 SLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
++ LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 297 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 40/175 (22%), Positives = 80/175 (45%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
+ LF S +++ I++ S N + H V+ T ++++CLS+N Y++ ++A+ D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSN-NTSKPSH--SVDAHT-AEVNCLSFNPYSEFILATGSAD 295
Query: 401 GIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--------CKVGSADH 451
V +WD+ + + +E H+ + V +S ++L S D K+G
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 355
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
D + L + GH +S + N + S S D+ +++W + EN+
Sbjct: 356 PEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ S+V E + V + + + +SW+ ++L S D + I
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 255 WD-TRSNNTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 310
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 384 LSWN-KYTKNLIASSDYDGIVTIWDVTT---SQSVME----YEEHEKRAWSVDFSCTEPS 435
LSWN + +L+++SD D + +WD++ V++ + H V + S
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 241
Query: 436 MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDS 493
+ S +DD K+ D + N S+P H + H V+ + F +E LA+ S D
Sbjct: 242 LFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADK 296
Query: 494 SLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
++ LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 297 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 40/175 (22%), Positives = 80/175 (45%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
+ LF S +++ I++ S N + H V+ T ++++CLS+N Y++ ++A+ D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSN-NTSKPSH--SVDAHT-AEVNCLSFNPYSEFILATGSAD 295
Query: 401 GIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--------CKVGSADH 451
V +WD+ + + +E H+ + V +S ++L S D K+G
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 355
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
D + L + GH +S + N + S S D+ +++W + EN+
Sbjct: 356 PEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ S+V E + V + + + +SW+ ++L S D + I
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 255 WD-TRSNNTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 310
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 384 LSWN-KYTKNLIASSDYDGIVTIWDVTT---SQSVME----YEEHEKRAWSVDFSCTEPS 435
LSWN + +L+++SD D + +WD++ V++ + H V + S
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 241
Query: 436 MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDS 493
+ S +DD K+ D + N S+P H + H V+ + F +E LA+ S D
Sbjct: 242 LFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADK 296
Query: 494 SLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
++ LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 297 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 40/175 (22%), Positives = 80/175 (45%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
+ LF S +++ I++ S N + H V+ T ++++CLS+N Y++ ++A+ D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSN-NTSKPSH--SVDAHT-AEVNCLSFNPYSEFILATGSAD 295
Query: 401 GIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--------CKVGSADH 451
V +WD+ + + +E H+ + V +S ++L S D K+G
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 355
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
D + L + GH +S + N + S S D+ +++W + EN+
Sbjct: 356 PEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ S+V E + V + + + +SW+ ++L S D + I
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 255 WD-TRSNNTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 310
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 384 LSWN-KYTKNLIASSDYDGIVTIWDVTT---SQSVME----YEEHEKRAWSVDFSCTEPS 435
LSWN + +L+++SD D + +WD++ V++ + H V + S
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 241
Query: 436 MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDS 493
+ S +DD K+ D + N S+P H + H V+ + F +E LA+ S D
Sbjct: 242 LFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADK 296
Query: 494 SLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
++ LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 297 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 40/175 (22%), Positives = 80/175 (45%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
+ LF S +++ I++ S N + H V+ T ++++CLS+N Y++ ++A+ D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSN-NTSKPSH--SVDAHT-AEVNCLSFNPYSEFILATGSAD 295
Query: 401 GIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--------CKVGSADH 451
V +WD+ + + +E H+ + V +S ++L S D K+G
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 355
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
D + L + GH +S + N + S S D+ +++W + EN+
Sbjct: 356 PEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 149 (57.5 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 42/155 (27%), Positives = 70/155 (45%)
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSA 449
+ L++ S+ D + WD+ + + + Y+ H W +D S P L S GS
Sbjct: 372 SSGLLSCSE-DMSIRYWDLGSFTNTVLYQGHAYPVWDLDIS---PYSLYFAS-----GSH 422
Query: 450 DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLHT 508
D + + PL ++ GH V VKF N N LA+ STD ++RLW ++ +
Sbjct: 423 DRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRL 481
Query: 509 FRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKA 543
F GH + + N +Y+A E + ++ A
Sbjct: 482 FTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 516
Score = 120 (47.3 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 44/161 (27%), Positives = 69/161 (42%)
Query: 399 YDG-IVTIWDVTTSQSVMEYEE--HEK--RAWSVDFSCTEPSMLVSG--SD-DC------ 444
Y G +WD+ S + + H++ R WS F T P + +G +D DC
Sbjct: 398 YQGHAYPVWDLDISPYSLYFASGSHDRTARLWS--FDRTYPLRIYAGHLADVDCVKFHPN 455
Query: 445 ----KVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWD 499
GS D + + + + +F GH+ V + F N + LASA D L+LWD
Sbjct: 456 SNYLATGSTDKTVRLWSAQQ-GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 514
Query: 500 VKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
+ RGHT+ + + ++ IA S N V V+
Sbjct: 515 LASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVW 555
Score = 46 (21.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 103 RQVANAASPIEH-LRL---ALQQGCEVSVKELDGLLSLLVAKKRKLEQEEAETNMQILLN 158
RQ ++ P++ LRL A + ++V+ G +++ A + E ++ E L N
Sbjct: 38 RQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSAAPCQAEPQQYEVQFGRLRN 97
Query: 159 FL 160
FL
Sbjct: 98 FL 99
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 145 (56.1 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 44/149 (29%), Positives = 71/149 (47%)
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
LI S D + IWD T Q V + + A VDF+ PS G+ GS D
Sbjct: 28 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFN---PS----GTCIASAGS-DQT 79
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVKENLPLHTFRG 511
+ +D+R +++ L + H V+ + F S N L +AS+D +L++ D+ E ++T +G
Sbjct: 80 VKVWDVR-VNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 138
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVY 540
HT V + E A G +V ++
Sbjct: 139 HTGPVFTVSFSKGGELFASGGADTQVLLW 167
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 151 (58.2 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 60/239 (25%), Positives = 113/239 (47%)
Query: 305 LATFTQYSRLRVIAELRHGD--LFHA-ANIISSIEFDRDDELFASAGVSRRIKIFEFSSV 361
+A T S+L+V EL + H + I SI+ R +FA+ + ++++
Sbjct: 360 IAVATNSSQLKVF-ELSTNSCQILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMD-- 416
Query: 362 VNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDV--TT-SQSVMEYE 418
V+ R VH + + ++ ++ + + S D V +WD+ TT ++ VM +
Sbjct: 417 VSSGR-VHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMK 475
Query: 419 EHE-KRAWSVDFSCTEPSMLVSGSDDCKV-GSADHHIHYYDLRNISQPLHVFNGHKKAVS 476
+RA D + S+ VS +D GS D + L ++ + L V GH++ V
Sbjct: 476 ARSTERAHEKDVN----SVCVSPNDKLLASGSQDRTAKLWALSDL-RLLGVCRGHRRGVW 530
Query: 477 YVKFLSNNE-LASASTDSSLRLWDVKENLPLHTFRGH-TNEKNFVGLTVNNEYIACGSE 533
V+F ++ L SAS D S+R+W +++ L TF GH + + ++ + ++ GS+
Sbjct: 531 SVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSD 589
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 42/165 (25%), Positives = 75/165 (45%)
Query: 383 CLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
C+S N L+AS D +W ++ + + H + WSV FS P + GS
Sbjct: 491 CVSPND---KLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFS---PVDQILGS- 543
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVK 501
SAD + + +++ S L F GH +V + F+S +L S+ +D ++LW +K
Sbjct: 544 ----ASADGSVRIWSIQDFSC-LKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIK 598
Query: 502 ENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
N + T H ++ + +E + GS + + V+ + K
Sbjct: 599 TNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWTDKLRK 643
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 144 (55.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 40/131 (30%), Positives = 62/131 (47%)
Query: 386 WNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCK 445
W+ + AS+ D + IWDV + + H+ S D+ ++LV+G+ DC
Sbjct: 163 WSPHIPGCFASASGDQTLRIWDVKAAGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCS 222
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDV-KE 502
+ +DLRN+ QP+ GH A+ VKF + LAS S D ++R W+ K
Sbjct: 223 LRG-------WDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKP 275
Query: 503 NLPLHTFRGHT 513
+ L T HT
Sbjct: 276 DSLLETVEHHT 286
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 36/122 (29%), Positives = 63/122 (51%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSD 442
++W++ ++++ + DG + +WD + ++ Y+EH + +SVD+S T LV
Sbjct: 73 VTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVS-- 130
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE---LASASTDSSLRLWD 499
GS D + +D + + L F GH+ + Y S + ASAS D +LR+WD
Sbjct: 131 ----GSWDQTVKLWD-PTVGKSLCTFRGHESII-YSTIWSPHIPGCFASASGDQTLRIWD 184
Query: 500 VK 501
VK
Sbjct: 185 VK 186
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 147 (56.8 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 52/210 (24%), Positives = 99/210 (47%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S++F D +L +A + IK++ S+ + R + Y + + C ++ +
Sbjct: 105 VRSVDFSADGQLLVTASEDKSIKVW---SMFRQ-RFL-YSLYRHT--HWVRCAKFSPDGR 157
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
LI S D + IWD T Q V + + A VDF+ P+ G+ GS DH
Sbjct: 158 -LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFN---PN----GTCIASAGS-DH 208
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLS-NNELASASTDSSLRLWDVKENLPLHTFR 510
+ +D+R +++ L + H V+ + F N L +AS+D ++++ D+ E ++T +
Sbjct: 209 AVKIWDIR-MNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQ 267
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
GHT V + + E + G +V ++
Sbjct: 268 GHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 118 (46.6 bits), Expect = 0.00091, P = 0.00091
Identities = 42/158 (26%), Positives = 64/158 (40%)
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--CKVGSA 449
NL+AS+ D V +W + E++ H SVDFS + +LV+ S+D KV S
Sbjct: 73 NLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSA-DGQLLVTASEDKSIKVWSM 131
Query: 450 DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKENLPLHT 508
Y L H V KF + L S S D ++++WD ++
Sbjct: 132 FRQRFLYSLYR----------HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 509 FRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
F NFV N IA + V ++ ++K
Sbjct: 182 FSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNK 219
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 146 (56.5 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 44/159 (27%), Positives = 75/159 (47%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ S+V E + V + + + +SW+ ++L S D + I
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A++ + +C S + GS D + +DLRN+ L
Sbjct: 255 WD-TRSNNTSK-PSHSVDAYTAEVNCL--SFNPNSEFILASGSPDKTVALWDLRNLKLKL 310
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 142 (55.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 46/162 (28%), Positives = 74/162 (45%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTT---SQSVME----YEEHEKRAWSVDFSCTEPSM 436
LSWN Y + S+ D + +WD++ V+ + H V + S+
Sbjct: 183 LSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 437 LVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSS 494
S +DD K+ D + N S+P H + + V+ + F N+E LAS S D +
Sbjct: 243 FGSVADDQKLMIWDTRSN-----NTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPDKT 297
Query: 495 LRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
+ LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 143 (55.4 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 54/209 (25%), Positives = 95/209 (45%)
Query: 334 SIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYTKN 392
S+ F D + A+ ++ IF + E Y + TR K + ++++ K
Sbjct: 111 SLAFSPDSQFLATGSHVGKVNIFGVETGKKE-----Y---SLDTRGKFILSIAYSPDGKY 162
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L AS DGI+ I+D+ T + + E H S+ FS + +LV+ SDD G +
Sbjct: 163 L-ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDD---G----Y 213
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTFRG 511
I YD+++ + +GH V V F ++ S+S+D S+++WD +HTF
Sbjct: 214 IKIYDVQHANLA-GTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFD 272
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H ++ V + I + E+ +Y
Sbjct: 273 HQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 143 (55.4 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 54/209 (25%), Positives = 95/209 (45%)
Query: 334 SIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYTKN 392
S+ F D + A+ ++ IF + E Y + TR K + ++++ K
Sbjct: 111 SLAFSPDSQFLATGSHVGKVNIFGVETGKKE-----Y---SLDTRGKFILSIAYSPDGKY 162
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L AS DGI+ I+D+ T + + E H S+ FS + +LV+ SDD G +
Sbjct: 163 L-ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDD---G----Y 213
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTFRG 511
I YD+++ + +GH V V F ++ S+S+D S+++WD +HTF
Sbjct: 214 IKIYDVQHANLA-GTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFD 272
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H ++ V + I + E+ +Y
Sbjct: 273 HQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
>ASPGD|ASPL0000002981 [details] [associations]
symbol:AN6257 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006998 "nuclear
envelope organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 EMBL:AACD01000107 EMBL:BN001301 eggNOG:NOG248389
KO:K14005 InterPro:IPR009917 Pfam:PF07304 RefSeq:XP_663861.1
STRING:Q5AZM3 GeneID:2871160 KEGG:ani:AN6257.2 HOGENOM:HOG000048339
OMA:NQPPPMM OrthoDB:EOG4RR9RS Uniprot:Q5AZM3
Length = 1282
Score = 152 (58.6 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 47/188 (25%), Positives = 86/188 (45%)
Query: 332 ISSIEFD-RDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKY 389
I +++F+ R L A+ G + I + + + N P Y + R+ + CL WNK
Sbjct: 123 IKALQFNPRHSSLLATGGAKGELYISDLNDLEN-P----YRLGSSTARADDIECLDWNKK 177
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWS-VDFSCTEPSMLVSGSDDCKVGS 448
+++ + G VT+WDV T + + ++A S V + T+P+ LV+ +
Sbjct: 178 VAHILVTGSSAGFVTVWDVKTRKESLTLNNMGRKAVSAVAWDPTKPTKLVTATPH----E 233
Query: 449 ADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENLPL 506
+D I+ +DLRN P GH+ V + + + + L S+ D+ W+ + +
Sbjct: 234 SDPIINLWDLRNSHAPERTLRGHEAGVLSLSWCNQDPDLLLSSGKDNRTICWNPQTGISY 293
Query: 507 HTFRGHTN 514
F TN
Sbjct: 294 GEFPVVTN 301
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 146 (56.5 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ S+V E + V + + + +SW+ ++L S D + I
Sbjct: 195 SASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 255 WD-TRSNNTSK-PSHAVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 310
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 139 (54.0 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 44/162 (27%), Positives = 74/162 (45%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTT---SQSVME----YEEHEKRAWSVDFSCTEPSM 436
LSWN + S+ D + +WD++T +++ + H V + S+
Sbjct: 183 LSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 437 LVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSS 494
S +DD K+ D + N S+P H + H V+ + F +E LA+ S D +
Sbjct: 243 FGSVADDQKLMIWDTRSN-----NTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKT 297
Query: 495 LRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
+ LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Score = 120 (47.3 bits), Expect = 0.00049, P = 0.00049
Identities = 40/175 (22%), Positives = 80/175 (45%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
+ LF S +++ I++ S N + H V+ T ++++CLS+N Y++ ++A+ D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSN-NTSKPSH--AVDAHT-AEVNCLSFNPYSEFILATGSAD 295
Query: 401 GIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD--------CKVGSADH 451
V +WD+ + + +E H+ + V +S ++L S D K+G
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 355
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
D + L + GH +S + N + S S D+ +++W + EN+
Sbjct: 356 PEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 144 (55.7 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 41/155 (26%), Positives = 69/155 (44%)
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSA 449
+ L++ S+ D + WD+ + + + Y+ H W +D S P L S S
Sbjct: 350 SSGLLSCSE-DMSIRYWDLGSFTNTVLYQGHAYPVWDLDIS---PHSLYFAS-----ASH 400
Query: 450 DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLHT 508
D + + PL ++ GH V VKF N N LA+ STD ++RLW ++ +
Sbjct: 401 DRTARLWSFDR-TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRL 459
Query: 509 FRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKA 543
F GH + + N +Y+A E + ++ A
Sbjct: 460 FTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 494
Score = 120 (47.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 43/161 (26%), Positives = 69/161 (42%)
Query: 399 YDG-IVTIWDVTTSQSVMEYEE--HEK--RAWSVDFSCTEPSMLVSG--SD-DC------ 444
Y G +WD+ S + + H++ R WS F T P + +G +D DC
Sbjct: 376 YQGHAYPVWDLDISPHSLYFASASHDRTARLWS--FDRTYPLRIYAGHLADVDCVKFHPN 433
Query: 445 ----KVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWD 499
GS D + + + + +F GH+ V + F N + LASA D L+LWD
Sbjct: 434 SNYLATGSTDKTVRLWSTQQ-GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 492
Query: 500 VKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
+ RGHT+ + + ++ +A S N V V+
Sbjct: 493 LASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVW 533
Score = 49 (22.3 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 103 RQVANAASPIEHLRLAL---QQGCEVSVKELDGLLSLLVAKKRKLEQEEAETNMQILLNF 159
RQ +A P + LRL+ + ++V+ G +++ A + E ++ E L NF
Sbjct: 20 RQYGDADGPKQILRLSQSTEEMAASLTVQSESGCANIVSAAPCQAEPQQYEVQFGRLRNF 79
Query: 160 L 160
L
Sbjct: 80 L 80
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 145 (56.1 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 60/238 (25%), Positives = 111/238 (46%)
Query: 313 RLRVIAELRHGDLFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPR-DVHY- 370
++ +I ++ H + A ++ ++ + A+ VS + IF+ + EP D
Sbjct: 111 KIEIIQKINHEGEVNRARVMP-----QNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCS 165
Query: 371 PMVEMPTRSKLSC-LSWNKYTK-NLIASSDYDGIVTIWDVTT---SQSVME----YEEHE 421
P +++ K +SWN + +L++ SD D + +WD++ S S ++ Y H
Sbjct: 166 PNLKLTGHKKEGYGISWNPRKEGHLLSCSD-DQSICMWDISAASKSDSTLDALNIYNGHT 224
Query: 422 KRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL 481
V + + S DD K + +D R ++P+HV H V+ + F
Sbjct: 225 SIVEDVAWHYIHDTFFGSVGDDKK-------LMIWDTRTGTKPIHVVEAHNSEVNCLSFN 277
Query: 482 SNNE--LASASTDSSLRLWDVKENLP--LHTFRGHTNEKNFVGLTVNNEYI--ACGSE 533
E +A+ STD ++ LWD++ NL LH+ HT+E V + +NE + +CGS+
Sbjct: 278 PFCEFLVATGSTDKTVALWDMR-NLGNRLHSLISHTDEVFQVQFSPHNETVLASCGSD 334
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 44/175 (25%), Positives = 83/175 (47%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
D F S G +++ I++ + +P +H +VE S+++CLS+N + + L+A+ D
Sbjct: 237 DTFFGSVGDDKKLMIWD-TRTGTKP--IH--VVEAHN-SEVNCLSFNPFCEFLVATGSTD 290
Query: 401 GIVTIWDVTT-SQSVMEYEEHEKRAWSVDFSCTEPSMLVS-GSD------DC-KVGSADH 451
V +WD+ + H + V FS ++L S GSD D ++G +
Sbjct: 291 KTVALWDMRNLGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSRIGEEQN 350
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN--ELASASTDSSLRLWDVKENL 504
+ D + L + GH +S + N+ +AS + D+ L++W + EN+
Sbjct: 351 NEDAAD--GPPELLFIHGGHTSKISDFSWNPNDPWSIASVAEDNILQIWQMAENI 403
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 147 (56.8 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 74/338 (21%), Positives = 145/338 (42%)
Query: 213 TASKKTDEKAQISSQGLLMKDACGGPDSPYASQSGLTAARKQRVRAQLNDLKEYYLQKRR 272
T KK++++ ++ D GP + Y + + A + + +L+++ QKR
Sbjct: 169 TGPKKSEKRKKVKGGEAADIDNFLGPWAKYQDEKDV-AKPSEDEQKELDEITAKR-QKRG 226
Query: 273 QSTAQSHKEDEG-----DLYAVSREGYHPGLEDFRSVLATFTQYSRLRVIAELRHGDLFH 327
++ +S E++ D Y Y +D L + + + + H H
Sbjct: 227 KNEEESPAEEKTVLHIKDAYDYQGRSYLHIPQDVGINLRSADIPDKCYLPKKQLHVWTGH 286
Query: 328 AANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWN 387
+ + F + L S + +IK++E V NE R V + + C + N
Sbjct: 287 TKGVSAIRLFPKSGHLLLSCSMDCKIKLWE---VYNERRCVR-TFIGHSKAVRDVCFN-N 341
Query: 388 KYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEP--SMLVSGSDDCK 445
T+ L A+ YD + +WD T Q + + + K + V F+ E ++LV+G D K
Sbjct: 342 SGTQFLSAA--YDRYIKLWDSETGQCISRFT-NRKVPYCVKFNPDEDKQNLLVAGMSDKK 398
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLW--DVKE 502
+ +D+R+ + + ++ H AV+ + F+ N S S D SLR+W D+
Sbjct: 399 IVQ-------WDIRS-GEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWEWDIPA 450
Query: 503 NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
+ + + V L+ N +++AC S N++ ++
Sbjct: 451 DFK-YIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIF 487
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 146 (56.5 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 47/164 (28%), Positives = 74/164 (45%)
Query: 360 SVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEE 419
S N P + +P + R+ L + +Y ++ S D V++WDV + + +
Sbjct: 202 STFNNP-SIRFP-ADQDFRATLDSVYCVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYG 259
Query: 420 HEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVK 479
H +DF C ++LVSGS D I +D +N +PL V+ GH V V
Sbjct: 260 HSGSVLCLDF-CRRRNLLVSGSSDST-------IIIWDWQN-RRPLKVYFGHTDNVLGV- 309
Query: 480 FLSNNELASASTDSSLRLWDVKENLP----LHTFRGHTNEKNFV 519
+S N + S+S D + R+W + P +H RGH N V
Sbjct: 310 VVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSV 353
Score = 132 (51.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 48/210 (22%), Positives = 89/210 (42%)
Query: 340 DDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDY 399
DDE+ S R + +++ +S R + Y + + CL + + +NL+ S
Sbjct: 230 DDEIMVSGSKDRTVSVWDVNS-----RFILYKLYGHS--GSVLCLDFCR-RRNLLVSGSS 281
Query: 400 DGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLR 459
D + IWD + + Y H V S + ++S S D + D
Sbjct: 282 DSTIIIWDWQNRRPLKVYFGHTDNVLGVVVS---ENYIISSSRDHTA-----RVWRLDAT 333
Query: 460 NISQP-LHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKENLPLHTFRG-HTNEK 516
+ ++ +HV GH +V+ V++ S L +AS+D +LR WD+ H R H +++
Sbjct: 334 SPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTG---HCIRIIHAHQR 390
Query: 517 NFVGLTVNNEYIACGSETNEVFVYHKAISK 546
N ++I GS + ++ + K
Sbjct: 391 GIACAQYNGKFIVSGSSDLTIRIFEASSGK 420
Score = 130 (50.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 39/124 (31%), Positives = 60/124 (48%)
Query: 428 DFSCTEPSML-VSGSDDCKV-GSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-N 484
DF T S+ V D+ V GS D + +D+ N L+ GH +V + F N
Sbjct: 216 DFRATLDSVYCVQYDDEIMVSGSKDRTVSVWDV-NSRFILYKLYGHSGSVLCLDFCRRRN 274
Query: 485 ELASASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAI 544
L S S+DS++ +WD + PL + GHT+ N +G+ V+ YI S + V+
Sbjct: 275 LLVSGSSDSTIIIWDWQNRRPLKVYFGHTD--NVLGVVVSENYIISSSRDHTARVWRLDA 332
Query: 545 SKPA 548
+ PA
Sbjct: 333 TSPA 336
Score = 37 (18.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEE 419
++L+AS +G+V +++ S ++ E
Sbjct: 46 RDLLASLSKEGVVAVYNHVRSLLFTDFTE 74
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 148 (57.2 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 40/151 (26%), Positives = 68/151 (45%)
Query: 388 KYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVG 447
+Y + S YD +V +WD T + + H R +S+ F +VSGS
Sbjct: 561 QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH---VVSGS------ 611
Query: 448 SADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLH 507
D I +D+ +H GH+ S ++ L +N L S + DS++++WD+K L
Sbjct: 612 -LDTSIRVWDVET-GNCIHTLTGHQSLTSGME-LKDNILVSGNADSTVKIWDIKTGQCLQ 668
Query: 508 TFRG-HTNEKNFVGLTVNNEYIACGSETNEV 537
T +G H ++ L N ++ S+ V
Sbjct: 669 TLQGPHKHQSAVTCLQFNKNFVITSSDDGTV 699
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 142 (55.0 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 37/125 (29%), Positives = 63/125 (50%)
Query: 415 MEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKA 474
M H+ +S++FS ++ + S S D + H+++ N + + V GHK A
Sbjct: 31 MLINSHKGEVYSINFS-SDGKYIASSSFDMTI--MVHNVY-----NECETIGVLRGHKNA 82
Query: 475 VSYVKFLSN-NELASASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSE 533
V K+L + N + SAS D L LWDV+ L +F+GH N N + + +N +++C +
Sbjct: 83 VLQAKWLQDDNYICSASADHKLFLWDVECESKLRSFKGHDNIVNGLDIINHNLFVSCSDD 142
Query: 534 TNEVF 538
F
Sbjct: 143 NTLKF 147
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 130 (50.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 39/140 (27%), Positives = 65/140 (46%)
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
+L + D +WD+ T + VM E H K +S++FS P+ GS D+
Sbjct: 363 SLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFS---PNGF-----HVATGSGDN 414
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENLPLHTF 509
+DLR + ++ H+ VS VKF N+ L + + D++ ++W PL T
Sbjct: 415 ACKVWDLRQ-RRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTL 473
Query: 510 RGHTNEKNFVGLTVNNEYIA 529
GH + V L+ + + IA
Sbjct: 474 AGHEGKVMGVDLSPDGQLIA 493
Score = 129 (50.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 53/212 (25%), Positives = 90/212 (42%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFS--SVVNEPRDVHYPMVEMPTRSKLSCLSWNKY 389
IS +F + +L +A S K+++ +++ R H V + + L+ +
Sbjct: 219 ISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRG-HNTNVGAISFHPQATLTLEES 277
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSA 449
N+ AS DG V +W + + + + + E H R V + PS G+ C
Sbjct: 278 DVNM-ASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTW---HPSGRFLGTT-CY---- 328
Query: 450 DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELA-SASTDSSLRLWDVKENLPLHT 508
DH +DL + LH GH K V + F + LA + DS R+WD++ +
Sbjct: 329 DHSWRLWDLEVQEEILHQ-EGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMF 387
Query: 509 FRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
GH E + + N ++A GS N V+
Sbjct: 388 LEGHIKEIYSINFSPNGFHVATGSGDNACKVW 419
Score = 61 (26.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 35/155 (22%), Positives = 66/155 (42%)
Query: 132 GLLSLLVAKKRKLEQEEAETNMQILLNFLHCLRKQKLEELN---EIQADLRCIEEDVYAV 188
G +++ + ++E+ +E ++L F R +++ E++A LR + E +
Sbjct: 48 GHINISSGESMEMEERVSERQAEVLAEFERRKRARQITVSTDDVEVKACLRALGEPITLF 107
Query: 189 EKHKIELYRARGRCLAKLRTFDDFTASKKTDEKAQISSQGLLMKDACGGPDSPYASQSGL 248
+ E R R R + + D SKK DEKA+ + + GP S ++ L
Sbjct: 108 GEGPAER-RERLRNVLSVLGPDALKKSKKEDEKAKRTHEEYQQTWYHEGPTS--LKEARL 164
Query: 249 TAARKQRVRAQLNDLKEYYLQKRRQSTAQSHKEDE 283
A+ RA + L QK + ++ K+ E
Sbjct: 165 WLAKYSLPRA-VKRLDAARAQKEIPESTRTIKQQE 198
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/151 (26%), Positives = 69/151 (45%)
Query: 388 KYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVG 447
+Y + S YD +V +WD T + + H R +S+ F +VSGS
Sbjct: 430 QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH---VVSGS------ 480
Query: 448 SADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLH 507
D I +D+ +H GH+ S ++ L +N L S + DS++++WD+K L
Sbjct: 481 -LDTSIRVWDVET-GNCIHTLTGHQSLTSGME-LKDNILVSGNADSTVKIWDIKTGQCLQ 537
Query: 508 TFRGHTNEKNFVG-LTVNNEYIACGSETNEV 537
T +G + ++ V L N ++ S+ V
Sbjct: 538 TLQGPSKHQSAVTCLQFNKNFVITSSDDGTV 568
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 39/156 (25%), Positives = 66/156 (42%)
Query: 386 WNKYTK-NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDC 444
W+ + N+I S D + +W+ T + + H +V +VSGS D
Sbjct: 347 WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTS---TVRCMHLHEKRVVSGSRDA 403
Query: 445 KVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENL 504
+ +D+ Q LHV GH AV V++ + S + D +++WD +
Sbjct: 404 T-------LRVWDIET-GQCLHVLMGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETET 454
Query: 505 PLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
LHT +GHTN L + ++ GS + V+
Sbjct: 455 CLHTLQGHTNR--VYSLQFDGIHVVSGSLDTSIRVW 488
>DICTYBASE|DDB_G0278733 [details] [associations]
symbol:aip1 "actin-interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0030863 "cortical
cytoskeleton" evidence=IDA] [GO:0051015 "actin filament binding"
evidence=IDA] [GO:0043327 "chemotaxis to cAMP" evidence=IGI]
[GO:0030041 "actin filament polymerization" evidence=IGI]
[GO:0030010 "establishment of cell polarity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0060187 "cell pole" evidence=IDA]
[GO:0042641 "actomyosin" evidence=IDA] [GO:0030864 "cortical actin
cytoskeleton" evidence=IDA] [GO:0030042 "actin filament
depolymerization" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006935 "chemotaxis" evidence=IMP] [GO:0006909
"phagocytosis" evidence=IMP] [GO:0006907 "pinocytosis"
evidence=IMP] [GO:0001891 "phagocytic cup" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0278733 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GenomeReviews:CM000152_GR
GO:GO:0008283 eggNOG:COG2319 GO:GO:0006909 GO:GO:0006935
GO:GO:0030042 EMBL:AAFI02000024 GO:GO:0001891 GO:GO:0030864
GO:GO:0006907 GO:GO:0060187 EMBL:U36936 RefSeq:XP_642008.1
ProteinModelPortal:P54686 STRING:P54686 EnsemblProtists:DDB0214916
GeneID:8621739 KEGG:ddi:DDB_G0278733 OMA:INGIAAW
ProtClustDB:CLSZ2430741 Uniprot:P54686
Length = 597
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 54/228 (23%), Positives = 91/228 (39%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
++ + F D + G + K F + E + + + T C SW+
Sbjct: 194 VNCVRFSPDGNKLVTVGADK--KAFVYDGKTGE-KLIELNPAQQHTGGIYGC-SWSA-DN 248
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
N + ++ D IWD TT Q + + + D + + L G V A
Sbjct: 249 NRVLTASADKSCKIWDTTTGQCINSF------TFGSDVNDQQLGCLWFGDSLLSVNLAGE 302
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLHTFR 510
I +L ++++P V GH K V + F N L SAS D+SL WD+ L + F
Sbjct: 303 -ISTLNLDDVAKPSRVIKGHNKLVGTIAFDKNAGSLYSASYDASLLQWDLSTGLATN-FT 360
Query: 511 GHTNEKNFVGLTVN-NEYIACGSETNEVFVYHKAISKPAASHRFGSDA 557
G ++ + +N ++ I C + + V +ISK G D+
Sbjct: 361 GPAHKNQITSIKINGDQLITCAMDDS---VKISSISKKTYGESIGVDS 405
>TAIR|locus:2063349 [details] [associations]
symbol:AT2G05720 "AT2G05720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006863 "purine nucleobase
transport" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003676 EMBL:AC007170 GO:GO:0030529 InterPro:IPR027106
PANTHER:PTHR19846 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000157615
IPI:IPI00531184 PIR:C84471 RefSeq:NP_178635.1 UniGene:At.52653
ProteinModelPortal:Q9SIB8 SMR:Q9SIB8 STRING:Q9SIB8
EnsemblPlants:AT2G05720.1 GeneID:815121 KEGG:ath:AT2G05720
TAIR:At2g05720 InParanoid:Q9SIB8 OMA:YIIPAHV PhylomeDB:Q9SIB8
ArrayExpress:Q9SIB8 Genevestigator:Q9SIB8 Uniprot:Q9SIB8
Length = 276
Score = 139 (54.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 395 ASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIH 454
ASS +D + +WD+ T+++++ ++ H K+ SVDFS L SG +D +
Sbjct: 146 ASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFS-PNGYHLASGGED-------NQCR 197
Query: 455 YYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENLPLHTFRGH 512
+DLR + + L++ H VS VK+ LA+AS D ++ +W ++ + + GH
Sbjct: 198 IWDLR-MRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGH 256
Query: 513 TNEKNFVGLTVNNEYIAC 530
++ + + V++ C
Sbjct: 257 ESKVASLDIAVDSSSRKC 274
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 327 HAANII-SSIEFDRDDELFASAGVSRRIKIFE 357
H +++ SS+ DDE A+A R KI++
Sbjct: 108 HVTDVVFSSV----DDECLATASTDRTEKIWK 135
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 40/151 (26%), Positives = 69/151 (45%)
Query: 388 KYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVG 447
+Y + S YD +V +WD T + + H R +S+ F +VSGS
Sbjct: 430 QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH---VVSGS------ 480
Query: 448 SADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLH 507
D I +D+ +H GH+ S ++ L +N L S + DS++++WD+K L
Sbjct: 481 -LDTSIRVWDVET-GNCIHTLTGHQSLTSGME-LKDNILVSGNADSTVKIWDIKTGQCLQ 537
Query: 508 TFRGHTNEKNFVG-LTVNNEYIACGSETNEV 537
T +G + ++ V L N ++ S+ V
Sbjct: 538 TLQGPSKHQSAVTCLQFNKNFVITSSDDGTV 568
Score = 124 (48.7 bits), Expect = 0.00030, P = 0.00030
Identities = 39/156 (25%), Positives = 66/156 (42%)
Query: 386 WNKYTK-NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDC 444
W+ + N+I S D + +W+ T + + H +V +VSGS D
Sbjct: 347 WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTS---TVRCMHLHEKRVVSGSRDA 403
Query: 445 KVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENL 504
+ +D+ Q LHV GH AV V++ + S + D +++WD +
Sbjct: 404 T-------LRVWDIET-GQCLHVLMGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETET 454
Query: 505 PLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
LHT +GHTN L + ++ GS + V+
Sbjct: 455 CLHTLQGHTNR--VYSLQFDGIHVVSGSLDTSIRVW 488
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 51/184 (27%), Positives = 88/184 (47%)
Query: 334 SIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYTKN 392
++ F D + A+ ++ IF S E Y + TR K + ++++ K
Sbjct: 111 TLAFSPDSQYLATGTHVGKVNIFGVESGKKE-----Y---SLDTRGKFILSIAYSPDGKY 162
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L AS DGI+ I+D+ T + + E H S+ FS + +LV+ SDD G +
Sbjct: 163 L-ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDD---G----Y 213
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTFRG 511
I YD+++ + +GH V V F ++ S+S+D S+++WDV +HTF
Sbjct: 214 IKIYDVQHANLA-GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 272
Query: 512 HTNE 515
H ++
Sbjct: 273 HQDQ 276
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 144 (55.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 41/155 (26%), Positives = 69/155 (44%)
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSA 449
+ L++ S+ D + WD+ + + + Y+ H W +D S P L S S
Sbjct: 354 SSGLLSCSE-DMSIRYWDLRSFTNTVLYQGHAYPVWDLDIS---PCSLYFAS-----ASH 404
Query: 450 DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKENLPLHT 508
D + + PL ++ GH V VKF N N LA+ STD ++RLW ++ +
Sbjct: 405 DRTARLWSFDR-TYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRL 463
Query: 509 FRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKA 543
F GH + + N +Y+A E + ++ A
Sbjct: 464 FTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLA 498
Score = 120 (47.3 bits), Expect = 0.00069, P = 0.00069
Identities = 37/147 (25%), Positives = 61/147 (41%)
Query: 395 ASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIH 454
AS+ +D +W + + Y H +D C + S+ GS D +
Sbjct: 400 ASASHDRTARLWSFDRTYPLRIYAGH-----LLDVDCVK---FHPNSNYLATGSTDKTVR 451
Query: 455 YYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTFRGHT 513
+ + + +F GH+ V + F N + LASA D L+LWD+ RGHT
Sbjct: 452 LWSTQQ-GNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHT 510
Query: 514 NEKNFVGLTVNNEYIACGSETNEVFVY 540
+ + + ++ IA S N V V+
Sbjct: 511 DNITSLTFSPDSSLIASASMDNSVRVW 537
>SGD|S000003934 [details] [associations]
symbol:SOF1 "Essential protein required for biogenesis of the
40S ribosomal subunit" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000003934 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006945 GO:GO:0030686 EMBL:X91488 GO:GO:0032040
GeneTree:ENSGT00390000005711 HOGENOM:HOG000210082 KO:K11806
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 OrthoDB:EOG4GXJWG
EMBL:X70052 EMBL:Z73116 PIR:S35323 RefSeq:NP_013090.1
ProteinModelPortal:P33750 SMR:P33750 DIP:DIP-746N IntAct:P33750
MINT:MINT-635582 STRING:P33750 PaxDb:P33750 PeptideAtlas:P33750
EnsemblFungi:YLL011W GeneID:850649 KEGG:sce:YLL011W CYGD:YLL011w
NextBio:966596 Genevestigator:P33750 GermOnline:YLL011W
GO:GO:0000462 Uniprot:P33750
Length = 489
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 38/159 (23%), Positives = 81/159 (50%)
Query: 381 LSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSG 440
++ L +N+ +++AS+ D + ++D+ T+ + + R ++ ++ E V+
Sbjct: 222 ITSLKFNQNETDILASTGSDNSIVLYDLRTNSPTQKIVQ-TMRTNAICWNPMEAFNFVTA 280
Query: 441 SDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWD 499
++D H+ +YYD+RN+S+ L+VF H AV V F + +E+ + S D S+R++
Sbjct: 281 NED-------HNAYYYDMRNLSRSLNVFKDHVSAVMDVDFSPTGDEIVTGSYDKSIRIYK 333
Query: 500 VKENLPLHTFRGHTNEKNF-VGLTVNNEYIACGSETNEV 537
+ + F V +++++YI GS+ V
Sbjct: 334 TNHGHSREIYHTKRMQHVFQVKYSMDSKYIISGSDDGNV 372
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 80/347 (23%), Positives = 145/347 (41%)
Query: 183 EDVYAVEKHKIELYR-ARGRCLAKLRTFDDFTASKKTDEKAQISS-QGLLMKDACGGPDS 240
+ VYA+ K+ L + A G ++ ++ T + KA GL +
Sbjct: 68 DGVYAIAKNYGSLNKLATGSADGVIKYWNMSTREEFVSFKAHYGLVTGLCVTQPRFHDKK 127
Query: 241 P-YASQSG-LTAARKQRVRAQLNDLKEYYLQKRRQSTAQSHKEDEGDLYAVSREGYHPGL 298
P SQ+ L+ + + V+ ++ +Y + S S +EG + E G+
Sbjct: 128 PDLKSQNFMLSCSDDKTVKLWSINVDDY--SNKNSSDNDSVTNEEGLIRTFDGESAFQGI 185
Query: 299 EDFR--SVLATFTQYSRLRVIAELRH-GDLFHAANIISSIEFDRDD-ELFASAGVSRRIK 354
+ R S AT L + L+ DL A+ I+S++F++++ ++ AS G I
Sbjct: 186 DSHRENSTFATGGAKIHLWDVNRLKPVSDLSWGADNITSLKFNQNETDILASTGSDNSIV 245
Query: 355 IFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTT-SQS 413
+++ + N P + R+ C WN +++ D +D+ S+S
Sbjct: 246 LYDLRT--NSPTQ----KIVQTMRTNAIC--WNPMEAFNFVTANEDHNAYYYDMRNLSRS 297
Query: 414 VMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGS-ADHHIHYYDLRNISQPLHVFNGHK 472
+ +++H VDFS T +V+GS D + +H H ++ + + HVF
Sbjct: 298 LNVFKDHVSAVMDVDFSPTGDE-IVTGSYDKSIRIYKTNHGHSREIYHTKRMQHVFQ--- 353
Query: 473 KAVSYVKFLSNNELASASTDSSLRLWDVK--ENLPLHTFRGHTNEKN 517
V Y + + + S S D ++RLW K E + T T EKN
Sbjct: 354 --VKYS--MDSKYIISGSDDGNVRLWRSKAWERSNVKT----TREKN 392
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 142 (55.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 44/159 (27%), Positives = 72/159 (45%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ S E + V + + + +SW+ ++L S D + I
Sbjct: 195 SASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 254
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 255 WD-TRSNNTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 310
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 138 (53.6 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 46/163 (28%), Positives = 79/163 (48%)
Query: 384 LSWN-KYTKNLIASSDYDGIVTIWDVTTSQS---VME----YEEHEKRAWSVDFSCTEPS 435
LSWN + NL+++SD D + +WD++ + +++ + H V + S
Sbjct: 183 LSWNPNLSGNLLSASD-DHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHES 241
Query: 436 MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDS 493
+ S +DD K+ D + N S+P H + H V+ + F +E LA+ S D
Sbjct: 242 LFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADK 296
Query: 494 SLRLWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
++ LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 297 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 40/173 (23%), Positives = 82/173 (47%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
+ LF S +++ I++ S N + H V+ T ++++CLS+N Y++ ++A+ D
Sbjct: 240 ESLFGSVADDQKLMIWDTRSN-NTSKPSH--SVDAHT-AEVNCLSFNPYSEFILATGSAD 295
Query: 401 GIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD-HHIHYYDL 458
V +WD+ + + +E H+ + V +S ++L S D ++ D I
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 355
Query: 459 RNISQ---P--LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
++ P L + GH +S + N + S S D+ +++W + EN+
Sbjct: 356 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 40/151 (26%), Positives = 68/151 (45%)
Query: 388 KYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVG 447
+Y + S YD +V +WD T + + H R +S+ F +VSGS
Sbjct: 388 QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH---VVSGS------ 438
Query: 448 SADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLH 507
D I +D+ +H GH+ S ++ L +N L S + DS++++WD+K L
Sbjct: 439 -LDTSIRVWDVET-GNCIHTLTGHQSLTSGME-LKDNILVSGNADSTVKIWDIKTGQCLQ 495
Query: 508 TFRGHTNEKNFVG-LTVNNEYIACGSETNEV 537
T +G ++ V L N ++ S+ V
Sbjct: 496 TLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 526
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 78/360 (21%), Positives = 154/360 (42%)
Query: 193 IELYRARGRCLAKLRTFDDFTASKKTDEKAQISSQGLLMKDACGGPDSPYASQSGLTAAR 252
IEL R G + LR D T K+ + + I + +L + A P YA G + +
Sbjct: 85 IEL-RELGAARSLLRQTDPMTMLKQQEPERYIHLENMLQR-AYFDPREAYAE--GSSKEK 140
Query: 253 KQRVRAQLNDLKEYYLQKRRQSTAQSHKEDEGDLYAVSREGY-HPG--LEDFRSVLATFT 309
++ V AQ + + + R L +G PG ++ FR A
Sbjct: 141 RRTVIAQELSGEVHVVPSSRLLALLGQA-----LKWQQHQGLLPPGTTIDLFRGKAAMKD 195
Query: 310 QYSRL---RVIAELRHGDLFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPR 366
Q + ++ +++ G H + +F D + + V ++++ F++ +
Sbjct: 196 QEEEMYPTQLFRQIKFGQKSH----VECAQFSPDGQYLITGSVDGFLEVWNFTTG-KVRK 250
Query: 367 DVHYPMVEMPTRSKLSCLSWN-KYTKNLIASSDYDGIVTIWDVTTSQSVMEYEE-HEKRA 424
D+ Y + + + L+ N ++AS DG + +W + T Q + ++E+ H K
Sbjct: 251 DLKYQAQDQFMMMEQAVLALNFSRDSEMVASGAQDGQIKVWRIITGQCLRKFEKAHTKGI 310
Query: 425 WSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN- 483
+ FS + S ++S S D+ + + L++ + L F GH V+ F +
Sbjct: 311 TCLQFS-RDNSQVLSAS-------FDYTVRLHGLKS-GKMLKEFKGHSSFVNEATFTPDG 361
Query: 484 NELASASTDSSLRLWDVKENLPLHTFRGHTNEK--NFVGLTVNN--EYIACGSETNEVFV 539
+ + SAS+D ++++W +K + T++ NE N V + N +I C + +N V +
Sbjct: 362 HSVLSASSDGTVKVWSLKTTECVATYKPLGNELAVNTVLILPKNPEHFIVC-NRSNTVVI 420
Score = 119 (46.9 bits), Expect = 0.00078, P = 0.00078
Identities = 47/213 (22%), Positives = 98/213 (46%)
Query: 353 IKIFEFSSVVNEPRDVHYP-----MVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWD 407
I +F + + + + YP ++ +S + C ++ + LI S DG + +W+
Sbjct: 184 IDLFRGKAAMKDQEEEMYPTQLFRQIKFGQKSHVECAQFSPDGQYLITGS-VDGFLEVWN 242
Query: 408 VTTSQ--SVMEYEEHEKRAWSVDFSCTEPSML-VSGSDDCKV---GSADHHIHYYDLRNI 461
TT + ++Y+ ++ F E ++L ++ S D ++ G+ D I + +
Sbjct: 243 FTTGKVRKDLKYQAQDQ------FMMMEQAVLALNFSRDSEMVASGAQDGQIKVWRIIT- 295
Query: 462 SQPLHVFN-GHKKAVSYVKFL-SNNELASASTDSSLRLWDVKENLPLHTFRGHTNEKNFV 519
Q L F H K ++ ++F N+++ SAS D ++RL +K L F+GH++ N
Sbjct: 296 GQCLRKFEKAHTKGITCLQFSRDNSQVLSASFDYTVRLHGLKSGKMLKEFKGHSSFVNEA 355
Query: 520 GLTVNNEYIACGSETNEVFVYHKAISKPAASHR 552
T + + S V V+ ++ A+++
Sbjct: 356 TFTPDGHSVLSASSDGTVKVWSLKTTECVATYK 388
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 42/167 (25%), Positives = 75/167 (44%)
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKV--GS 448
+N++AS YD + +W++ T Q V E H + F D CK+ GS
Sbjct: 283 RNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF------------DQCKLISGS 330
Query: 449 ADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHT 508
D I ++ R S+ + + +GH +V + F + L S S D +++LW + T
Sbjct: 331 MDKTIRIWNYRT-SECISILHGHTDSVLCLTF-DSTLLVSGSADCTVKLWHFSGGKRI-T 387
Query: 509 FRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGS 555
RGHT N V + + + GS+ + + ++ ++ H F +
Sbjct: 388 LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIW--SLETNTCLHTFSA 432
Score = 129 (50.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 42/153 (27%), Positives = 71/153 (46%)
Query: 379 SKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV 438
S ++CL +++ LI+ S D + IW+ TS+ + H + F T +LV
Sbjct: 314 SGVTCLQFDQC--KLISGS-MDKTIRIWNYRTSECISILHGHTDSVLCLTFDST---LLV 367
Query: 439 SGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELA-SASTDSSLRL 497
SGS DC V H+ + I+ GH V+ V+ + + L S S DS++++
Sbjct: 368 SGSADCTVKLW----HFSGGKRIT-----LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKI 418
Query: 498 WDVKENLPLHTFRGHTNEKNFVGLTVNNEYIAC 530
W ++ N LHTF H + L ++ +C
Sbjct: 419 WSLETNTCLHTFSAHIGPVQSLALA-DSRLFSC 450
>ZFIN|ZDB-GENE-040426-1049 [details] [associations]
symbol:pwp1 "PWP1 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-1049
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
CTD:11137 GeneTree:ENSGT00390000017324 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:CU571163 EMBL:BC049457 IPI:IPI00497637 RefSeq:NP_956586.1
UniGene:Dr.79178 STRING:Q7ZWE1 Ensembl:ENSDART00000003790
GeneID:393262 KEGG:dre:393262 InParanoid:Q7ZWE1 NextBio:20814321
Uniprot:Q7ZWE1
Length = 490
Score = 143 (55.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 43/172 (25%), Positives = 78/172 (45%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
LSWN+ +N++AS+ D V +WD+ + +H + ++ F E L+SGS
Sbjct: 260 LSWNRLVRNVLASASADETVILWDLEKGKPAATLAKHTDKVQTLKFHPFEAQTLISGS-- 317
Query: 444 CKVGSADHHIHYYDLRNISQPLHV--FNGHKKAVSYVKFLSNNELASASTDSSLRLWDVK 501
D + YD R+ + F+G + V++ F N LAS D + D +
Sbjct: 318 -----FDKSVILYDCRSPDDSHRIWRFSGQVERVTWDHFSPCNFLASTE-DGFIYCLDAR 371
Query: 502 ENLPLHTFRGHTNEKNFVGLT--VNNEYIACGSETNEVFVYHKAISKPAASH 551
+ P+ T R H E + + L+ + + C ++ + V ++ +KP H
Sbjct: 372 SDKPVFTLRAHDGEVSGMDLSSQIRGCLVTCSADKH-VKIWDILGNKPNLIH 422
Score = 44 (20.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 23/83 (27%), Positives = 36/83 (43%)
Query: 188 VEKHKIELYRARGRCLAKLRTFDDFTASKKTDEKAQISSQGLLMKDACGGPDSPYASQSG 247
VE K EL R +LR D+ + DE +S GL K+ P + + G
Sbjct: 23 VELSKEELQRIISEAKEELRDRDEEEEEDEADEGV-VS--GLDSKEEASAPATV---EEG 76
Query: 248 LTAARKQRVRAQLNDLKEYYLQK 270
+ +K+ + ++L EY L K
Sbjct: 77 IK--KKEDGNEEDDELAEYDLDK 97
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 40/151 (26%), Positives = 68/151 (45%)
Query: 388 KYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVG 447
+Y + S YD +V +WD T + + H R +S+ F +VSGS
Sbjct: 428 QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH---VVSGS------ 478
Query: 448 SADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLH 507
D I +D+ +H GH+ S ++ L +N L S + DS++++WD+K L
Sbjct: 479 -LDTSIRVWDVET-GNCIHTLTGHQSLTSGME-LKDNILVSGNADSTVKIWDIKTGQCLQ 535
Query: 508 TFRGHTNEKNFVG-LTVNNEYIACGSETNEV 537
T +G ++ V L N ++ S+ V
Sbjct: 536 TLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 566
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 44/164 (26%), Positives = 77/164 (46%)
Query: 396 SSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHY 455
S +DG + +WD+ T ++ + H K SV FS T+ +VS S D + +
Sbjct: 80 SGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFS-TDNRQIVSASRDRTIKL------W 132
Query: 456 YDLRNISQPLHVFNGHKKAVSYVKFLSNN---ELASASTDSSLRLWDVKENLPL-HTFRG 511
L + +GHK+ VS V+F N + SAS D ++++W++ +N L ++ G
Sbjct: 133 NTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL-QNCKLRNSLVG 191
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGS 555
H+ N V ++ + A G + + ++ A K S GS
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS 235
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 149 (57.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 53/213 (24%), Positives = 90/213 (42%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S+ F D L ASA +KI++ ++ + +E S + +
Sbjct: 266 VGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNT------LEGHNEWVKSVVF--SHDS 317
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
L+AS+ DG V IWD T + H SV FS S L++ GS D
Sbjct: 318 RLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFS--HDSRLIAS------GSNDR 369
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTFR 510
+ ++ H F H+ +V V F ++ LASAS ++++WD + +
Sbjct: 370 TVRIWETTT-GLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLE 428
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVYHKA 543
GH + N V + ++ +A S+ V ++H A
Sbjct: 429 GHDDCVNSVSFSPDSRLLASASDDRTVKIWHAA 461
Score = 145 (56.1 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 53/179 (29%), Positives = 81/179 (45%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S+ F D L ASA +KI++ ++V P + + RS + +
Sbjct: 476 VRSVVFSHDSRLIASASDDMTVKIWDTATV---PLQNNLESHDNWVRSVVF-----SHDS 527
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
L+AS+ D V IWD T E H+ R SV FS + +L S SDD V
Sbjct: 528 RLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFS-PDSRLLASASDDGTV----- 581
Query: 452 HIHYYDLRNISQPLHVFNGHKK-AVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTF 509
I Y + H F+G + A+S ++N LASA D ++++WD++ HTF
Sbjct: 582 KIWYAATGTVQ---HTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTF 637
Score = 127 (49.8 bits), Expect = 0.00053, P = 0.00053
Identities = 47/166 (28%), Positives = 71/166 (42%)
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L+AS+ D V IW T E H SV FS + ++ S SDD V
Sbjct: 445 LLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFS-HDSRLIASASDDMTV------ 497
Query: 453 IHYYDLRNISQPL-HVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKENLPLHTFR 510
+D + PL + H V V F ++ L ASAS D ++++WD +T
Sbjct: 498 -KIWDTATV--PLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLE 554
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRF-GS 555
GH + N V + ++ +A S+ V +++ A H F GS
Sbjct: 555 GHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATG--TVQHTFDGS 598
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 62/246 (25%), Positives = 116/246 (47%)
Query: 299 EDFRSVLATF-TQYSRLRVIAELRHGDLFHAANIISSIEFDRDDELFASAGVSRRIKIFE 357
+D RS F ++++I ++ H + A + F + A+ V+ + +F+
Sbjct: 100 DDDRSEFGGFGCATGKVQIIQQINHDGEVNRARYMPQNPF-----IIATKTVNAEVYVFD 154
Query: 358 FSSVVNEPR-D-VHYPMVEMPTRSKLSC-LSWNKYTK-NLIASSDYDGIVTIWDV--TTS 411
+S ++P D P +++ S LSW+K+ + +L++ SD D + +WD+ T
Sbjct: 155 YSKHPSKPPLDGACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSD-DAQICLWDINATPK 213
Query: 412 QSVME----YEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRN--ISQPL 465
++ ++ HE V + + GS VG D ++ +DLR+ S+P+
Sbjct: 214 NKSLDAQQIFKAHEGVVEDVAWHLRHEYLF--GS----VGD-DQYLLIWDLRSPSASKPV 266
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE-NLPLHTFRGHTNEKNFVGLT 522
H V+ + F NE +A+ STD +++L+D+++ + LHTF H E VG
Sbjct: 267 QSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWN 326
Query: 523 VNNEYI 528
NE I
Sbjct: 327 PKNETI 332
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 144 (55.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 40/151 (26%), Positives = 68/151 (45%)
Query: 388 KYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVG 447
+Y + S YD +V +WD T + + H R +S+ F +VSGS
Sbjct: 508 QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH---VVSGS------ 558
Query: 448 SADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLH 507
D I +D+ +H GH+ S ++ L +N L S + DS++++WD+K L
Sbjct: 559 -LDTSIRVWDVET-GNCIHTLTGHQSLTSGME-LKDNILVSGNADSTVKIWDIKTGQCLQ 615
Query: 508 TFRGHTNEKNFVG-LTVNNEYIACGSETNEV 537
T +G ++ V L N ++ S+ V
Sbjct: 616 TLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 646
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 144 (55.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 40/151 (26%), Positives = 68/151 (45%)
Query: 388 KYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVG 447
+Y + S YD +V +WD T + + H R +S+ F +VSGS
Sbjct: 513 QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH---VVSGS------ 563
Query: 448 SADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLH 507
D I +D+ +H GH+ S ++ L +N L S + DS++++WD+K L
Sbjct: 564 -LDTSIRVWDVET-GNCIHTLTGHQSLTSGME-LKDNILVSGNADSTVKIWDIKTGQCLQ 620
Query: 508 TFRGHTNEKNFVG-LTVNNEYIACGSETNEV 537
T +G ++ V L N ++ S+ V
Sbjct: 621 TLQGPNKHQSAVTCLQFNKNFVITSSDDGTV 651
>ASPGD|ASPL0000003994 [details] [associations]
symbol:AN6160 species:162425 "Emericella nidulans"
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0031124 "mRNA 3'-end processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0007059 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0006397 EMBL:BN001301 EMBL:AACD01000105 KO:K15542
RefSeq:XP_663764.1 ProteinModelPortal:Q5AZX0 STRING:Q5AZX0
EnsemblFungi:CADANIAT00006850 GeneID:2870757 KEGG:ani:AN6160.2
HOGENOM:HOG000213918 OMA:RDICILR OrthoDB:EOG4QVGMD Uniprot:Q5AZX0
Length = 567
Score = 142 (55.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 50/169 (29%), Positives = 82/169 (48%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
L+W+ +++SD D + I+D T H S D+ T+ +LVSGS D
Sbjct: 161 LAWSPSDTKFLSASD-DTTLKIYDFTARTCDTVLTGHNWDVKSCDWHPTK-GLLVSGSKD 218
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDVK 501
H + ++D R ++ L + HK V+ KF ++NN LA++S D + R++D++
Sbjct: 219 -------HQVKFWDPRT-ARCLTTLHSHKNTVTATKFSRVNNNLLATSSRDQTARVFDLR 270
Query: 502 ENLPLHTFRGHTNEKNFVGLT---VNNEYIACGSETNEVFVYHKAISKP 547
+ RGH EK LT V+ I+ GSE + YH + +P
Sbjct: 271 MMRDICILRGH--EKPISTLTWHPVHCSLISTGSEDGSL--YHYLLDEP 315
>UNIPROTKB|Q2HJ56 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BC113302 IPI:IPI00691154 RefSeq:NP_001039631.1
UniGene:Bt.12659 ProteinModelPortal:Q2HJ56 STRING:Q2HJ56
PRIDE:Q2HJ56 Ensembl:ENSBTAT00000006109 GeneID:514147
KEGG:bta:514147 CTD:11137 GeneTree:ENSGT00390000017324
HOGENOM:HOG000212580 HOVERGEN:HBG001543 InParanoid:Q2HJ56 KO:K14791
OMA:RGVAKET OrthoDB:EOG4STS4J NextBio:20871193 Uniprot:Q2HJ56
Length = 500
Score = 141 (54.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 50/195 (25%), Positives = 85/195 (43%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
LSWNK +N++AS+ D V +WD++ + H + ++ F E L+SGS D
Sbjct: 261 LSWNKLVRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQTLISGSYD 320
Query: 444 CKVGSADHHIHYYDLRNISQPLHV--FNGHKKAVSYVKFLSNNELASASTDSSLRLWDVK 501
V YD R+ + + F+G + V++ F + LAS D + D +
Sbjct: 321 KSVA-------LYDCRSPEESHRMWRFSGQIERVTWNHFSPCHFLASTD-DGFVYNLDAR 372
Query: 502 ENLPLHTFRGHTNEKNFVGLTVNNEYIAC---GSETNEVFVYHKAISKPAASHRFGSDAD 558
+ P+ T H +E + GL ++++ C S V ++ +P+ H
Sbjct: 373 SDKPIFTLNAHNDEIS--GLDLSSQIKGCLVTASADKYVKIWDILGDRPSLVHSR----- 425
Query: 559 HVDDDMGSYFISAVC 573
D MG F S+ C
Sbjct: 426 --DMKMGVLFCSSCC 438
>FB|FBgn0001105 [details] [associations]
symbol:Gbeta13F "G protein beta-subunit 13F" species:7227
"Drosophila melanogaster" [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS;NAS] [GO:0003924 "GTPase activity"
evidence=ISS;NAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS;NAS] [GO:0055059 "asymmetric neuroblast
division" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005886 GO:GO:0005875 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 ChiTaRS:Gbeta13F EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0045176
PRINTS:PR00319 GO:GO:0055059 GeneTree:ENSGT00550000074331 KO:K04536
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:M22567
EMBL:AY058566 PIR:A40489 RefSeq:NP_525090.1 RefSeq:NP_727907.1
RefSeq:NP_996459.1 RefSeq:NP_996460.1 RefSeq:NP_996461.1
RefSeq:NP_996462.1 UniGene:Dm.7041 ProteinModelPortal:P26308
SMR:P26308 DIP:DIP-18432N MINT:MINT-1016369 STRING:P26308
PaxDb:P26308 PRIDE:P26308 EnsemblMetazoa:FBtr0074106
EnsemblMetazoa:FBtr0074107 EnsemblMetazoa:FBtr0074108
EnsemblMetazoa:FBtr0074110 EnsemblMetazoa:FBtr0074111
EnsemblMetazoa:FBtr0331597 GeneID:32544 KEGG:dme:Dmel_CG10545
CTD:32544 FlyBase:FBgn0001105 InParanoid:P26308 OrthoDB:EOG4NS1T0
PhylomeDB:P26308 GenomeRNAi:32544 NextBio:779043 Bgee:P26308
GermOnline:CG10545 Uniprot:P26308
Length = 340
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 38/140 (27%), Positives = 71/140 (50%)
Query: 379 SKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV 438
+K+ + W ++NL+++S DG + +WD T+ V + + +W + +C +
Sbjct: 56 AKIYAMHWGNDSRNLVSASQ-DGKLIVWDSHTTNKV--HAIPLRSSWVM--TC---AYAP 107
Query: 439 SGSDDCKVGSADHHIHYYDLRNISQPLHVFN---GHKKAVSYVKFLSNNELASASTDSSL 495
SGS G D+ Y+L+ + V GH +S +FL +N++ ++S D S
Sbjct: 108 SGSY-VACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSC 166
Query: 496 RLWDVKENLPLHTFRGHTNE 515
LWD++ L + +F GHT +
Sbjct: 167 GLWDIETGLQVTSFLGHTGD 186
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 139 (54.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 30/119 (25%), Positives = 67/119 (56%)
Query: 386 WNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCK 445
W+ + K+L + D ++ I DV + + ++ + + ++ FS ++L +
Sbjct: 216 WHNFNKDLFGTVSEDSLLKINDVRANNTTIDTVKCPQPFNTLAFSHHSSNLLAAAG---- 271
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
D +++ YDLRN+ +PLH +GH+ AV+ ++F ++ + + S+ +D+ L +WD+K+
Sbjct: 272 ---MDSYVYLYDLRNMKEPLHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQ 327
>GENEDB_PFALCIPARUM|PFL1975c [details] [associations]
symbol:PFL1975c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014188 HSSP:P46680 OMA:TALCTQW
RefSeq:XP_001350799.1 ProteinModelPortal:Q8I518 IntAct:Q8I518
MINT:MINT-1581047 EnsemblProtists:PFL1975c:mRNA GeneID:811447
KEGG:pfa:PFL1975c EuPathDB:PlasmoDB:PF3D7_1241100
HOGENOM:HOG000283504 ProtClustDB:CLSZ2432595 Uniprot:Q8I518
Length = 468
Score = 140 (54.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 52/209 (24%), Positives = 99/209 (47%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYP-MVEMPTRSKLSCLSWNKYT 390
+S +E+ ++D LFA + + I SS +N + + + + LSC + T
Sbjct: 133 VSCLEWSKNDNLFAGNSLGQ---IVILSSALNLLDNYAFEGLTKNVLDISLSCCN----T 185
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD 450
K L +D + IWD+ T + + + + K + + SC + + +D G+
Sbjct: 186 K-LAGCADTCNPI-IWDIKTRKVIKDLKC--KNIDTNNISCLAWNPI---NDIVASGNRT 238
Query: 451 HHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTF 509
H I ++D+R +++P+ N HK V+ +K+ +N L S S DS ++LWD++ L+++
Sbjct: 239 HTISFWDIR-MNKPIISLNSHKANVNKIKWNNNGIYLLSCSKDSLIKLWDIRNFKLLYSY 297
Query: 510 RGHTNEKNFVGLTVNNEYIACGSETNEVF 538
+ + N YIA N +F
Sbjct: 298 KNDQIQNNKFTSNYEPTYIAWNPIQNHIF 326
>UNIPROTKB|Q8I518 [details] [associations]
symbol:PFL1975c "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014188 HSSP:P46680 OMA:TALCTQW
RefSeq:XP_001350799.1 ProteinModelPortal:Q8I518 IntAct:Q8I518
MINT:MINT-1581047 EnsemblProtists:PFL1975c:mRNA GeneID:811447
KEGG:pfa:PFL1975c EuPathDB:PlasmoDB:PF3D7_1241100
HOGENOM:HOG000283504 ProtClustDB:CLSZ2432595 Uniprot:Q8I518
Length = 468
Score = 140 (54.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 52/209 (24%), Positives = 99/209 (47%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYP-MVEMPTRSKLSCLSWNKYT 390
+S +E+ ++D LFA + + I SS +N + + + + LSC + T
Sbjct: 133 VSCLEWSKNDNLFAGNSLGQ---IVILSSALNLLDNYAFEGLTKNVLDISLSCCN----T 185
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD 450
K L +D + IWD+ T + + + + K + + SC + + +D G+
Sbjct: 186 K-LAGCADTCNPI-IWDIKTRKVIKDLKC--KNIDTNNISCLAWNPI---NDIVASGNRT 238
Query: 451 HHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTF 509
H I ++D+R +++P+ N HK V+ +K+ +N L S S DS ++LWD++ L+++
Sbjct: 239 HTISFWDIR-MNKPIISLNSHKANVNKIKWNNNGIYLLSCSKDSLIKLWDIRNFKLLYSY 297
Query: 510 RGHTNEKNFVGLTVNNEYIACGSETNEVF 538
+ + N YIA N +F
Sbjct: 298 KNDQIQNNKFTSNYEPTYIAWNPIQNHIF 326
>UNIPROTKB|B0W517 [details] [associations]
symbol:CPIJ001500 "Ribosome biogenesis protein WDR12
homolog" species:7176 "Culex quinquefasciatus" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
HAMAP:MF_03029 EMBL:DS231840 RefSeq:XP_001843801.1
UniGene:Cpi.10498 ProteinModelPortal:B0W517 STRING:B0W517
GeneID:6033337 KEGG:cqu:CpipJ_CPIJ001500 VectorBase:CPIJ001500
Uniprot:B0W517
Length = 425
Score = 139 (54.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 60/232 (25%), Positives = 103/232 (44%)
Query: 327 HAANI--ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCL 384
H A + ++ I D + +FASA + + ++E++ N V + + R + C+
Sbjct: 146 HIAPVKGVTWISLDEEKGVFASASQDQTVMLWEWNVAANSVECVQ--VCKGHERG-VDCI 202
Query: 385 SWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDF-SCTEPSMLVSGSDD 443
+ N +K +A+ +D ++ IW + E + +D S P M ++G +
Sbjct: 203 AANG-SKTKMATGSWDTMLKIWSTDVRSGGGDSEPSTSKRQKLDQGSARTPLMTLAGHRE 261
Query: 444 CKVG------------SADHHIHYYDLRNISQPLHVFNGHKKA--VSYVKFLSNNELASA 489
C G S DH I +DL ++ +G+K +SY K N + +A
Sbjct: 262 CISGVQWIDDNTLVTSSWDHTIKIWDLA-LNGIKSEISGNKSFFDLSYSKL--NGLIITA 318
Query: 490 STDSSLRLWDVKEN---LPLHTFRGHTNEKNFVGLTVNNEYI-ACGSETNEV 537
S D +LRL+D K N L +T+ GHT V + NEY+ G+ N V
Sbjct: 319 SPDKNLRLYDPKSNQGTLVKNTYLGHTQWVQSVRWSTTNEYLFVSGAYDNHV 370
>CGD|CAL0000444 [details] [associations]
symbol:PGA63 species:5476 "Candida albicans" [GO:0030127
"COPII vesicle coat" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043332 "mating projection tip" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0090114 "COPII-coated vesicle budding" evidence=IEA]
[GO:0006998 "nuclear envelope organization" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000633 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000444 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005198 GO:GO:0015629
GO:GO:0015031 GO:GO:0007155 EMBL:AACQ01000038 EMBL:AACQ01000037
eggNOG:NOG248389 KO:K14005 RefSeq:XP_718724.1 RefSeq:XP_718807.1
ProteinModelPortal:Q5AAU3 STRING:Q5AAU3 GeneID:3639524
GeneID:3639607 KEGG:cal:CaO19.13598 KEGG:cal:CaO19.6217
InterPro:IPR009917 Pfam:PF07304 Uniprot:Q5AAU3
Length = 1265
Score = 145 (56.1 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 59/240 (24%), Positives = 110/240 (45%)
Query: 332 ISSIEFDR-DDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYT 390
+ S++F+ + + + G + +I I++ + +EP P M +++ +SWN
Sbjct: 121 VKSLQFNPIQNHVLVTGGSNGQIFIWD-TKTFSEP---FAPGQAMTPMDEITFVSWNNSV 176
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVME--YEEHEKRA-WS-VDFSCTEPSMLVSGSDD--C 444
+++AS+ G +IWD+ T + V+ Y RA +S V + ++ + L++ SD+ C
Sbjct: 177 SHILASTGNGGYTSIWDLKTKREVLHLSYTGAGGRANFSYVSWHPSQSTKLITASDNDSC 236
Query: 445 KVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
+ I +DLRN + P + GHKK V + + + L S+ D+S LW+ E
Sbjct: 237 PL------ILTWDLRNSNAPEKILEGHKKGVLSLDWCKQDPTLLLSSGKDNSTFLWNPIE 290
Query: 503 NLPLHTFRGHTN---EKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDADH 559
+ L + N E F + A S +V V + P+ S + S D+
Sbjct: 291 GIKLGEYPTTANWAFETKFAPAAP--DIFATASFDGKVVVQTIQDTSPSVSTKVASTDDN 348
>UNIPROTKB|Q13610 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471054 GO:GO:0006351 CTD:11137 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:L07758 EMBL:AK290681 IPI:IPI00014298 PIR:I39360
RefSeq:NP_008993.1 UniGene:Hs.506652 ProteinModelPortal:Q13610
SMR:Q13610 IntAct:Q13610 STRING:Q13610 PhosphoSite:Q13610
DMDM:2494897 PaxDb:Q13610 PeptideAtlas:Q13610 PRIDE:Q13610
DNASU:11137 Ensembl:ENST00000412830 GeneID:11137 KEGG:hsa:11137
UCSC:uc001tmo.1 GeneCards:GC12P108079 HGNC:HGNC:17015 HPA:HPA038707
neXtProt:NX_Q13610 PharmGKB:PA142671112 InParanoid:Q13610
PhylomeDB:Q13610 ChiTaRS:PWP1 GenomeRNAi:11137 NextBio:42336
ArrayExpress:Q13610 Bgee:Q13610 CleanEx:HS_PWP1
Genevestigator:Q13610 GermOnline:ENSG00000136045 Uniprot:Q13610
Length = 501
Score = 140 (54.3 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 50/195 (25%), Positives = 85/195 (43%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
LSWNK +N++AS+ D V +WD++ + H + ++ F E L+SGS D
Sbjct: 262 LSWNKLIRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQTLISGSYD 321
Query: 444 CKVGSADHHIHYYDLRNISQPLHV--FNGHKKAVSYVKFLSNNELASASTDSSLRLWDVK 501
V YD R+ + + F+G + V++ F + LAS D + D +
Sbjct: 322 KSVA-------LYDCRSPDESHRMWRFSGQIERVTWNHFSPCHFLASTD-DGFVYNLDAR 373
Query: 502 ENLPLHTFRGHTNEKNFVGLTVNNEYIAC---GSETNEVFVYHKAISKPAASHRFGSDAD 558
+ P+ T H +E + GL ++++ C S V ++ +P+ H
Sbjct: 374 SDKPIFTLNAHNDEIS--GLDLSSQIKGCLVTASADKYVKIWDILGDRPSLVHSR----- 426
Query: 559 HVDDDMGSYFISAVC 573
D MG F S+ C
Sbjct: 427 --DMKMGVLFCSSCC 439
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 136 (52.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 52/209 (24%), Positives = 93/209 (44%)
Query: 334 SIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSCLSWNKYTKN 392
++ F D + A+ ++ IF S E H + TR K + ++++ K
Sbjct: 111 TVAFSPDSKYIATGSHLGKVNIFGVESGKKE----H----SLDTRGKFILSIAYSPDGKY 162
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L AS DGI+ I+D+ T + + E H S+ FS + +LV+ SDD G +
Sbjct: 163 L-ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDD---G----Y 213
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-ELASASTDSSLRLWDVKENLPLHTFRG 511
I YD+++ + +GH V V F ++ S+S+D S+++WD ++TF
Sbjct: 214 IKIYDVQHANLA-GTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFD 272
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H ++ V I + + +Y
Sbjct: 273 HQDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 137 (53.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 37/157 (23%), Positives = 76/157 (48%)
Query: 379 SKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV 438
+K+ + W + +L+++S DG + +WD T+ V + + +W + + + + V
Sbjct: 63 AKIYAMHWAEDNVHLVSASQ-DGKLLVWDGLTTNKV--HAIPLRSSWVMTCAYSPTANFV 119
Query: 439 SGSDDCKVGSADHHIHYYDLRNISQPLHV---FNGHKKAVSYVKFLSNNELASASTDSSL 495
+ C G D+ Y+LR+ QP+ V N H +S +FL++ ++ ++S D +
Sbjct: 120 A----C--GGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLNDRQIVTSSGDMTC 173
Query: 496 RLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGS 532
LWDV+ + F H + V ++ + Y G+
Sbjct: 174 ILWDVENGTKITEFSDHNGDVMSVSVSPDKNYFISGA 210
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 143 (55.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 41/151 (27%), Positives = 72/151 (47%)
Query: 393 LIASSDYDGIVTIWDVTTSQSV-MEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
LI++SD D + +WD + E++EH + + +P M VSGS D
Sbjct: 206 LISASD-DRKIRVWDWENEWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGS-------LDK 257
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTFRG 511
+ + L + + GH+K V+ V+FL+ + S S D S+ +WD++ + T +
Sbjct: 258 TLKVWKLGE-QESICTLEGHEKGVNCVEFLTGGRIVSGSDDCSICVWDIQTQKCIETLKN 316
Query: 512 -HTNEKNFVGLTVNNEYIACGSETNEVFVYH 541
H N FV T +I G+E + V +++
Sbjct: 317 AHKNNVTFV--TPFKTWIISGAEDSTVKIWN 345
Score = 37 (18.1 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 40 LCPICKQLMTDAFMTACGHSFCYTCIF 66
+CP C+ + + T G + C F
Sbjct: 35 VCPKCQTTIMTSVTTHIGMCWWLICFF 61
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 41/163 (25%), Positives = 73/163 (44%)
Query: 381 LSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSG 440
L+ ++ NK I S YD +WD + + + E H +++ F+ + +G
Sbjct: 95 LTNVALNKSGSCFITGS-YDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATG 153
Query: 441 SDD--CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRL 497
S D CK+ S + Y H F GH + + F + L A+ S D++ +L
Sbjct: 154 SFDKTCKLWSVETGKCY----------HTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKL 203
Query: 498 WDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
WD++ ++T RGH+ E + + + I GS + V V+
Sbjct: 204 WDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVW 246
>POMBASE|SPAC4F8.11 [details] [associations]
symbol:SPAC4F8.11 "WD repeat protein, human WDR24 family"
species:4896 "Schizosaccharomyces pombe" [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=NAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC4F8.11 GO:GO:0005829 GO:GO:0043234
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0005778 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 PIR:T38840 RefSeq:NP_593862.1
ProteinModelPortal:O14186 EnsemblFungi:SPAC4F8.11.1 GeneID:2543518
KEGG:spo:SPAC4F8.11 OrthoDB:EOG4RBTST NextBio:20804528
Uniprot:O14186
Length = 846
Score = 142 (55.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 50/210 (23%), Positives = 92/210 (43%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK-LSC--LSW-N 387
IS+I ++ AG +K+ + ++P +++ T++K +SC + W +
Sbjct: 42 ISAISVNKSRTKVGVAG-RELLKVLAVNPNSSKPPVCISDLLQKSTQTKHISCNDVKWGS 100
Query: 388 KYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVG 447
+ NLI + G + +WDV + ++ EH + +D S PS +++ S D G
Sbjct: 101 SFASNLIFTCSPLGNLNVWDVNLEALLYDFNEHSRAVHKLDISSFHPSYVLTASQD---G 157
Query: 448 SADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN--NELASASTDSSLRLWDVK-ENL 504
I +D + S + F G+ +A V F + NE +A L+ WD++ L
Sbjct: 158 L----IKLWDYKESSSTI-TFRGNSEAARDVVFSPSEPNEFVAAYDSGILQKWDIRFPKL 212
Query: 505 PLHTFRGHTNEKNFVGLTVNNEYIA-CGSE 533
P H V + N ++A CG +
Sbjct: 213 PFLKLAAHNGVVLCVNYSPNGVFLASCGRD 242
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 49/187 (26%), Positives = 83/187 (44%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK---LSCLSWNK 388
+ + F + + A G+ IF +S + RD + P+ + T K SC
Sbjct: 111 VMTCAFAPNGQSVACGGLDSACSIFNLNSQAD--RDGNIPVSRILTGHKGYVSSCQYVPD 168
Query: 389 YTKNLIASSDYDGIVTIWDVTTSQSVM----EYEE-HEKRAWSVDFSCTEPSMLVSGSDD 443
LI SS D +WDVTT Q + E+ H S+ + + +M VSGS
Sbjct: 169 QETRLITSSG-DQTCVLWDVTTGQRISIFGGEFPSGHTADVLSLSINSSNSNMFVSGS-- 225
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKE 502
C D + +D+R S+ + ++GH+ ++ VKF + + + S D + RL+DV+
Sbjct: 226 C-----DATVRLWDIRIASRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDVRT 280
Query: 503 NLPLHTF 509
L +
Sbjct: 281 GHQLQVY 287
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 144 (55.7 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 51/165 (30%), Positives = 72/165 (43%)
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTE--PS--MLVSGSDDCK 445
T N A+ DG V IWD +EE R D C + P+ ++VSGS D
Sbjct: 213 TDNKFATCSDDGTVRIWDFLRC-----HEERILRGHGADVKCVDWHPTKGLVVSGSKD-- 265
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF-LSNNELASASTDSSLRLWDVKENL 504
+ I ++D + Q L + HK V VK L+ N L +AS D +L+D++ NL
Sbjct: 266 ---SQQPIKFWDPKT-GQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIR-NL 320
Query: 505 P--LHTFRGHTNEKNFVGL-TVNNEYIACGSETNEVFVYHKAISK 546
L FRGH E V V+ A G + +H + K
Sbjct: 321 KEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEK 365
Score = 142 (55.0 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 47/181 (25%), Positives = 73/181 (40%)
Query: 325 LFHA-ANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSC 383
+F A I F D FA+ ++I++F H + + + C
Sbjct: 197 MFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRC-------HEERILRGHGADVKC 249
Query: 384 LSWNKYTKNLIASSDYDGI--VTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGS 441
+ W+ TK L+ S D + WD T QS+ H+ V + +L +
Sbjct: 250 VDWHP-TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTA-- 306
Query: 442 DDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWD 499
S DH +D+RN+ + L VF GHKK + V + +E AS +D SL W
Sbjct: 307 ------SRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH 360
Query: 500 V 500
V
Sbjct: 361 V 361
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 144 (55.7 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 51/165 (30%), Positives = 72/165 (43%)
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTE--PS--MLVSGSDDCK 445
T N A+ DG V IWD +EE R D C + P+ ++VSGS D
Sbjct: 209 TDNKFATCSDDGTVRIWDFLRC-----HEERILRGHGADVKCVDWHPTKGLVVSGSKD-- 261
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF-LSNNELASASTDSSLRLWDVKENL 504
+ I ++D + Q L + HK V VK L+ N L +AS D +L+D++ NL
Sbjct: 262 ---SQQPIKFWDPKT-GQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIR-NL 316
Query: 505 P--LHTFRGHTNEKNFVGL-TVNNEYIACGSETNEVFVYHKAISK 546
L FRGH E V V+ A G + +H + K
Sbjct: 317 KEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEK 361
Score = 142 (55.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 47/181 (25%), Positives = 73/181 (40%)
Query: 325 LFHA-ANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSC 383
+F A I F D FA+ ++I++F H + + + C
Sbjct: 193 MFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRC-------HEERILRGHGADVKC 245
Query: 384 LSWNKYTKNLIASSDYDGI--VTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGS 441
+ W+ TK L+ S D + WD T QS+ H+ V + +L +
Sbjct: 246 VDWHP-TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTA-- 302
Query: 442 DDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWD 499
S DH +D+RN+ + L VF GHKK + V + +E AS +D SL W
Sbjct: 303 ------SRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH 356
Query: 500 V 500
V
Sbjct: 357 V 357
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 144 (55.7 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 51/165 (30%), Positives = 72/165 (43%)
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTE--PS--MLVSGSDDCK 445
T N A+ DG V IWD +EE R D C + P+ ++VSGS D
Sbjct: 213 TDNKFATCSDDGTVRIWDFLRC-----HEERILRGHGADVKCVDWHPTKGLVVSGSKD-- 265
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF-LSNNELASASTDSSLRLWDVKENL 504
+ I ++D + Q L + HK V VK L+ N L +AS D +L+D++ NL
Sbjct: 266 ---SQQPIKFWDPKT-GQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIR-NL 320
Query: 505 P--LHTFRGHTNEKNFVGL-TVNNEYIACGSETNEVFVYHKAISK 546
L FRGH E V V+ A G + +H + K
Sbjct: 321 KEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEK 365
Score = 142 (55.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 47/181 (25%), Positives = 73/181 (40%)
Query: 325 LFHA-ANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSC 383
+F A I F D FA+ ++I++F H + + + C
Sbjct: 197 MFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRC-------HEERILRGHGADVKC 249
Query: 384 LSWNKYTKNLIASSDYDGI--VTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGS 441
+ W+ TK L+ S D + WD T QS+ H+ V + +L +
Sbjct: 250 VDWHP-TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTA-- 306
Query: 442 DDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWD 499
S DH +D+RN+ + L VF GHKK + V + +E AS +D SL W
Sbjct: 307 ------SRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH 360
Query: 500 V 500
V
Sbjct: 361 V 361
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 144 (55.7 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 51/165 (30%), Positives = 72/165 (43%)
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTE--PS--MLVSGSDDCK 445
T N A+ DG V IWD +EE R D C + P+ ++VSGS D
Sbjct: 213 TDNKFATCSDDGTVRIWDFLRC-----HEERILRGHGADVKCVDWHPTKGLVVSGSKD-- 265
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF-LSNNELASASTDSSLRLWDVKENL 504
+ I ++D + Q L + HK V VK L+ N L +AS D +L+D++ NL
Sbjct: 266 ---SQQPIKFWDPKT-GQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIR-NL 320
Query: 505 P--LHTFRGHTNEKNFVGL-TVNNEYIACGSETNEVFVYHKAISK 546
L FRGH E V V+ A G + +H + K
Sbjct: 321 KEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEK 365
Score = 142 (55.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 47/181 (25%), Positives = 73/181 (40%)
Query: 325 LFHA-ANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSC 383
+F A I F D FA+ ++I++F H + + + C
Sbjct: 197 MFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRC-------HEERILRGHGADVKC 249
Query: 384 LSWNKYTKNLIASSDYDGI--VTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGS 441
+ W+ TK L+ S D + WD T QS+ H+ V + +L +
Sbjct: 250 VDWHP-TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTA-- 306
Query: 442 DDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWD 499
S DH +D+RN+ + L VF GHKK + V + +E AS +D SL W
Sbjct: 307 ------SRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH 360
Query: 500 V 500
V
Sbjct: 361 V 361
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 144 (55.7 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 51/165 (30%), Positives = 72/165 (43%)
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTE--PS--MLVSGSDDCK 445
T N A+ DG V IWD +EE R D C + P+ ++VSGS D
Sbjct: 213 TDNKFATCSDDGTVRIWDFLRC-----HEERILRGHGADVKCVDWHPTKGLVVSGSKD-- 265
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF-LSNNELASASTDSSLRLWDVKENL 504
+ I ++D + Q L + HK V VK L+ N L +AS D +L+D++ NL
Sbjct: 266 ---SQQPIKFWDPKT-GQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIR-NL 320
Query: 505 P--LHTFRGHTNEKNFVGL-TVNNEYIACGSETNEVFVYHKAISK 546
L FRGH E V V+ A G + +H + K
Sbjct: 321 KEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEK 365
Score = 142 (55.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 47/181 (25%), Positives = 73/181 (40%)
Query: 325 LFHA-ANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSC 383
+F A I F D FA+ ++I++F H + + + C
Sbjct: 197 MFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRC-------HEERILRGHGADVKC 249
Query: 384 LSWNKYTKNLIASSDYDGI--VTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGS 441
+ W+ TK L+ S D + WD T QS+ H+ V + +L +
Sbjct: 250 VDWHP-TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTA-- 306
Query: 442 DDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWD 499
S DH +D+RN+ + L VF GHKK + V + +E AS +D SL W
Sbjct: 307 ------SRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH 360
Query: 500 V 500
V
Sbjct: 361 V 361
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 144 (55.7 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 51/165 (30%), Positives = 72/165 (43%)
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTE--PS--MLVSGSDDCK 445
T N A+ DG V IWD +EE R D C + P+ ++VSGS D
Sbjct: 213 TDNKFATCSDDGTVRIWDFLRC-----HEERILRGHGADVKCVDWHPTKGLVVSGSKD-- 265
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF-LSNNELASASTDSSLRLWDVKENL 504
+ I ++D + Q L + HK V VK L+ N L +AS D +L+D++ NL
Sbjct: 266 ---SQQPIKFWDPKT-GQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIR-NL 320
Query: 505 P--LHTFRGHTNEKNFVGL-TVNNEYIACGSETNEVFVYHKAISK 546
L FRGH E V V+ A G + +H + K
Sbjct: 321 KEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEK 365
Score = 142 (55.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 47/181 (25%), Positives = 73/181 (40%)
Query: 325 LFHA-ANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSC 383
+F A I F D FA+ ++I++F H + + + C
Sbjct: 197 MFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRC-------HEERILRGHGADVKC 249
Query: 384 LSWNKYTKNLIASSDYDGI--VTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGS 441
+ W+ TK L+ S D + WD T QS+ H+ V + +L +
Sbjct: 250 VDWHP-TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTA-- 306
Query: 442 DDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWD 499
S DH +D+RN+ + L VF GHKK + V + +E AS +D SL W
Sbjct: 307 ------SRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH 360
Query: 500 V 500
V
Sbjct: 361 V 361
>TAIR|locus:2117169 [details] [associations]
symbol:AT4G18900 "AT4G18900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00537780
RefSeq:NP_567565.1 UniGene:At.50695 ProteinModelPortal:F4JSB9
SMR:F4JSB9 PRIDE:F4JSB9 EnsemblPlants:AT4G18900.1 GeneID:827624
KEGG:ath:AT4G18900 OMA:GFDVRQA PhylomeDB:F4JSB9 Uniprot:F4JSB9
Length = 461
Score = 138 (53.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 61/220 (27%), Positives = 102/220 (46%)
Query: 377 TRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSM 436
TRS L L+WNK +N++AS+ D V +WDV T + E H K +V ++ P +
Sbjct: 233 TRSVLG-LAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 437 LVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAV-SYVKFL-----SNNELASAS 490
L+SGS D V L++ QP H +G K +V S V+ L S + +
Sbjct: 292 LLSGSFDQTVV----------LKDGRQPSH--SGFKWSVMSDVESLAWDPHSEHSFVVSL 339
Query: 491 TDSSLRLWDVK-------ENLPLHTFRGHTNEKNFVGLTVNN-EYIACGSETNEVFVYHK 542
D +++ +DV+ E+ P T GH V ++ +A GS+ V ++
Sbjct: 340 EDGTVKGFDVRQASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDL 399
Query: 543 AISKPAASHRFGSDADHVDDDMGSYFISAVCWKSDSPTML 582
+ ++P+ A H + G +FI+ + D+P +L
Sbjct: 400 SNNEPSCI------ATHNPNAGGLFFIA---FSPDNPFLL 430
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 119 (46.9 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 36/138 (26%), Positives = 65/138 (47%)
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV-SGSDDCKVGSAD 450
+L + D +WD+ T + +M E H K + ++FS + SG + CKV
Sbjct: 393 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKV---- 448
Query: 451 HHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDVKENLPLHT 508
+DLR + ++ H+ V+ VKF + N L + + D++ ++W PL T
Sbjct: 449 -----WDLRQ-RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKT 502
Query: 509 FRGHTNEKNFVGLTVNNE 526
GH E +GL ++++
Sbjct: 503 LAGH--EGKVMGLDISSD 518
Score = 112 (44.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 44/160 (27%), Positives = 68/160 (42%)
Query: 382 SCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGS 441
S +S ++ NL AS DG V +W + + + V + E H R V + PS G+
Sbjct: 300 STVSLDQKDVNL-ASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMW---HPSGRFLGT 355
Query: 442 DDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELA-SASTDSSLRLWDV 500
C D +DL + LH GH V + F + LA + D+ R+WD+
Sbjct: 356 T-CY----DRSWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDL 409
Query: 501 KENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
+ + GH E + + N +IA GS N V+
Sbjct: 410 RTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVW 449
Score = 66 (28.3 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 36/167 (21%), Positives = 75/167 (44%)
Query: 120 QQGCEVSVKELDGLLSLLVAKKRKLEQEEAETNMQILLNFLHCLRKQKLE---ELNEIQA 176
++G + ++ G +++ + ++E+ +E ++L F R +++ + +E++A
Sbjct: 68 KEGLKAGIEA--GNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKA 125
Query: 177 DLRCIEEDVYAVEKHKIELYRARGRCLAKLRTFDDFTASKKTDEKAQISSQGLLMKDACG 236
LR + E + + E R R R + + D +KK DEK++ S +
Sbjct: 126 CLRALGEPITLFGEGPAER-RERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHE 184
Query: 237 GPDSPYASQSGLTAARKQRVRAQLNDLKEYYLQKRRQSTAQSHKEDE 283
GP+S ++ L A RA + L+E L K T ++ + E
Sbjct: 185 GPNSLKVAR--LWIANYSLPRA-MKRLEEARLHKEIPETTRTSQMQE 228
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 119 (46.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 36/138 (26%), Positives = 65/138 (47%)
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV-SGSDDCKVGSAD 450
+L + D +WD+ T + +M E H K + ++FS + SG + CKV
Sbjct: 395 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKV---- 450
Query: 451 HHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDVKENLPLHT 508
+DLR + ++ H+ V+ VKF + N L + + D++ ++W PL T
Sbjct: 451 -----WDLRQ-RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKT 504
Query: 509 FRGHTNEKNFVGLTVNNE 526
GH E +GL ++++
Sbjct: 505 LAGH--EGKVMGLDISSD 520
Score = 112 (44.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 44/160 (27%), Positives = 68/160 (42%)
Query: 382 SCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGS 441
S +S ++ NL AS DG V +W + + + V + E H R V + PS G+
Sbjct: 302 STVSLDQKDVNL-ASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMW---HPSGRFLGT 357
Query: 442 DDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELA-SASTDSSLRLWDV 500
C D +DL + LH GH V + F + LA + D+ R+WD+
Sbjct: 358 T-CY----DRSWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDL 411
Query: 501 KENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
+ + GH E + + N +IA GS N V+
Sbjct: 412 RTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVW 451
Score = 66 (28.3 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 36/167 (21%), Positives = 75/167 (44%)
Query: 120 QQGCEVSVKELDGLLSLLVAKKRKLEQEEAETNMQILLNFLHCLRKQKLE---ELNEIQA 176
++G + ++ G +++ + ++E+ +E ++L F R +++ + +E++A
Sbjct: 70 KEGLKAGIEA--GNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKA 127
Query: 177 DLRCIEEDVYAVEKHKIELYRARGRCLAKLRTFDDFTASKKTDEKAQISSQGLLMKDACG 236
LR + E + + E R R R + + D +KK DEK++ S +
Sbjct: 128 CLRALGEPITLFGEGPAER-RERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHE 186
Query: 237 GPDSPYASQSGLTAARKQRVRAQLNDLKEYYLQKRRQSTAQSHKEDE 283
GP+S ++ L A RA + L+E L K T ++ + E
Sbjct: 187 GPNSLKVAR--LWIANYSLPRA-MKRLEEARLHKEIPETTRTSQMQE 230
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 144 (55.7 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 51/165 (30%), Positives = 72/165 (43%)
Query: 390 TKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTE--PS--MLVSGSDDCK 445
T N A+ DG V IWD +EE R D C + P+ ++VSGS D
Sbjct: 214 TDNKFATCSDDGTVRIWDFLRC-----HEERILRGHGADVKCVDWHPTKGLVVSGSKD-- 266
Query: 446 VGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF-LSNNELASASTDSSLRLWDVKENL 504
+ I ++D + Q L + HK V VK L+ N L +AS D +L+D++ NL
Sbjct: 267 ---SQQPIKFWDPKT-GQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIR-NL 321
Query: 505 P--LHTFRGHTNEKNFVGL-TVNNEYIACGSETNEVFVYHKAISK 546
L FRGH E V V+ A G + +H + K
Sbjct: 322 KEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEK 366
Score = 142 (55.0 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 47/181 (25%), Positives = 73/181 (40%)
Query: 325 LFHA-ANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSC 383
+F A I F D FA+ ++I++F H + + + C
Sbjct: 198 MFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRC-------HEERILRGHGADVKC 250
Query: 384 LSWNKYTKNLIASSDYDGI--VTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGS 441
+ W+ TK L+ S D + WD T QS+ H+ V + +L +
Sbjct: 251 VDWHP-TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTA-- 307
Query: 442 DDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWD 499
S DH +D+RN+ + L VF GHKK + V + +E AS +D SL W
Sbjct: 308 ------SRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH 361
Query: 500 V 500
V
Sbjct: 362 V 362
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 137 (53.3 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 384 LSWNK-YTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
LSWN + +L+++SD D V +WD+ E + + +A S +
Sbjct: 173 LSWNSNLSGHLLSASD-DHTVCLWDINAGPK--EGKIVDAKAIFTGHSAVVEDVAWHLLH 229
Query: 443 DCKVGSA--DHHIHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLR 496
+ GS D + +D R+ S+P H+ + H V+ + F +E LA+ S D ++
Sbjct: 230 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 289
Query: 497 LWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
LWD++ L LHTF H +E V + +NE I S T+
Sbjct: 290 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTD 329
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
++W+ ++L S D + IWD T S + + H A + + +C S
Sbjct: 223 VAWHLLHESLFGSVADDQKLMIWD-TRSNTTSK-PSHLVDAHTAEVNCL--SFNPYSEFI 278
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVK 501
GSAD + +DLRN+ LH F HK + V + +NE LAS+ TD L +WD+
Sbjct: 279 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 338
Query: 502 E 502
+
Sbjct: 339 K 339
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 40/174 (22%), Positives = 85/174 (48%)
Query: 341 DELFASAGVSRRIKIFEF-SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDY 399
+ LF S +++ I++ S+ ++P H +V+ T ++++CLS+N Y++ ++A+
Sbjct: 230 ESLFGSVADDQKLMIWDTRSNTTSKPS--H--LVDAHT-AEVNCLSFNPYSEFILATGSA 284
Query: 400 DGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD-HHIHYYD 457
D V +WD+ + + +E H+ + V +S ++L S D ++ D I
Sbjct: 285 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 344
Query: 458 LRNISQ---P--LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
++ P L + GH +S + N + S S D+ +++W + EN+
Sbjct: 345 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 398
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 137 (53.3 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 384 LSWNK-YTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
LSWN + +L+++SD D V +WD+ E + + +A S +
Sbjct: 173 LSWNSNLSGHLLSASD-DHTVCLWDINAGPK--EGKIVDAKAIFTGHSAVVEDVAWHLLH 229
Query: 443 DCKVGSA--DHHIHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLR 496
+ GS D + +D R+ S+P H+ + H V+ + F +E LA+ S D ++
Sbjct: 230 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 289
Query: 497 LWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
LWD++ L LHTF H +E V + +NE I S T+
Sbjct: 290 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTD 329
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
++W+ ++L S D + IWD T S + + H A + + +C S
Sbjct: 223 VAWHLLHESLFGSVADDQKLMIWD-TRSNTTSK-PSHLVDAHTAEVNCL--SFNPYSEFI 278
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVK 501
GSAD + +DLRN+ LH F HK + V + +NE LAS+ TD L +WD+
Sbjct: 279 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 338
Query: 502 E 502
+
Sbjct: 339 K 339
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 40/174 (22%), Positives = 85/174 (48%)
Query: 341 DELFASAGVSRRIKIFEF-SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDY 399
+ LF S +++ I++ S+ ++P H +V+ T ++++CLS+N Y++ ++A+
Sbjct: 230 ESLFGSVADDQKLMIWDTRSNTTSKPS--H--LVDAHT-AEVNCLSFNPYSEFILATGSA 284
Query: 400 DGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD-HHIHYYD 457
D V +WD+ + + +E H+ + V +S ++L S D ++ D I
Sbjct: 285 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 344
Query: 458 LRNISQ---P--LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
++ P L + GH +S + N + S S D+ +++W + EN+
Sbjct: 345 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 398
>CGD|CAL0004044 [details] [associations]
symbol:orf19.268 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0070912 "Ddb1-Ckn1 complex" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004044 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000027 KO:K10570
RefSeq:XP_719966.1 ProteinModelPortal:Q5AEK0 STRING:Q5AEK0
GeneID:3638414 KEGG:cal:CaO19.268 Uniprot:Q5AEK0
Length = 447
Score = 141 (54.7 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 35/125 (28%), Positives = 60/125 (48%)
Query: 381 LSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSG 440
+SC+ W Y + ASS +D V IWD V ++ K + +D S E +++ +
Sbjct: 127 ISCIQWWPYDTGMFASSSFDHTVKIWDTNELTPVHTFDLSNK-VYDIDISA-ENALIATA 184
Query: 441 SDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLW 498
+D I DL + S H +GHK VK+ +++N LAS D +++W
Sbjct: 185 NDQ-------PFIRLLDLNSTSSA-HTLSGHKGKTLVVKWHPINSNILASGGYDGEVKIW 236
Query: 499 DVKEN 503
D++ +
Sbjct: 237 DIRRS 241
Score = 40 (19.1 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 530 CGSETNEVFVYHKAISKPAASHRFGSDADH-VDDD 563
CG+ E+ + + KP S D ++ DDD
Sbjct: 387 CGTIDGEIISWGPCLDKPDLSELRQQDENNDFDDD 421
>UNIPROTKB|Q5AEK0 [details] [associations]
symbol:RAD28 "Putative uncharacterized protein RAD28"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004044 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000027 KO:K10570
RefSeq:XP_719966.1 ProteinModelPortal:Q5AEK0 STRING:Q5AEK0
GeneID:3638414 KEGG:cal:CaO19.268 Uniprot:Q5AEK0
Length = 447
Score = 141 (54.7 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 35/125 (28%), Positives = 60/125 (48%)
Query: 381 LSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSG 440
+SC+ W Y + ASS +D V IWD V ++ K + +D S E +++ +
Sbjct: 127 ISCIQWWPYDTGMFASSSFDHTVKIWDTNELTPVHTFDLSNK-VYDIDISA-ENALIATA 184
Query: 441 SDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLW 498
+D I DL + S H +GHK VK+ +++N LAS D +++W
Sbjct: 185 NDQ-------PFIRLLDLNSTSSA-HTLSGHKGKTLVVKWHPINSNILASGGYDGEVKIW 236
Query: 499 DVKEN 503
D++ +
Sbjct: 237 DIRRS 241
Score = 40 (19.1 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 530 CGSETNEVFVYHKAISKPAASHRFGSDADH-VDDD 563
CG+ E+ + + KP S D ++ DDD
Sbjct: 387 CGTIDGEIISWGPCLDKPDLSELRQQDENNDFDDD 421
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 139 (54.0 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 62/268 (23%), Positives = 113/268 (42%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
I +++++R SAGV + I++ + E + +P P + W T
Sbjct: 332 IFALKWNRKGNYILSAGVDKTTIIWDAHT--GEAKQ-QFPFHSAPALD----VDWQNNTT 384
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPS--MLVSGSDDC--KVG 447
AS D + + + + V ++ H ++ + +PS +L S SDD K+
Sbjct: 385 --FASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKW---DPSGMLLASCSDDMTLKIW 439
Query: 448 SADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLH 507
S + +DL+ ++ ++ + SN LASAS DS++RLWD++ + H
Sbjct: 440 SMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTH 499
Query: 508 TFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDADHVDDDMGSY 567
T H V + + +Y+A GS V +++ S+R G+ G
Sbjct: 500 TLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYR-GT---------GGI 549
Query: 568 FISAVCWKSDSPTMLTANRKGAIKVLVL 595
F VCW + + + G++ VL L
Sbjct: 550 F--EVCWNARGDKVGASASDGSVCVLDL 575
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 384 LSWNK-YTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
LSWN + +L+++SD D V +WD+ E + + +A S +
Sbjct: 182 LSWNSNLSGHLLSASD-DHTVCLWDINAGPK--EGKIVDAKAIFTGHSAVVEDVAWHLLH 238
Query: 443 DCKVGSA--DHHIHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLR 496
+ GS D + +D R+ S+P H+ + H V+ + F +E LA+ S D ++
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 497 LWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
LWD++ L LHTF H +E V + +NE I S T+
Sbjct: 299 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTD 338
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
++W+ ++L S D + IWD T S + + H A + + +C S
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWD-TRSNTTSK-PSHLVDAHTAEVNCL--SFNPYSEFI 287
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVK 501
GSAD + +DLRN+ LH F HK + V + +NE LAS+ TD L +WD+
Sbjct: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Query: 502 E 502
+
Sbjct: 348 K 348
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 40/174 (22%), Positives = 85/174 (48%)
Query: 341 DELFASAGVSRRIKIFEF-SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDY 399
+ LF S +++ I++ S+ ++P H +V+ T ++++CLS+N Y++ ++A+
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPS--H--LVDAHT-AEVNCLSFNPYSEFILATGSA 293
Query: 400 DGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD-HHIHYYD 457
D V +WD+ + + +E H+ + V +S ++L S D ++ D I
Sbjct: 294 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 353
Query: 458 LRNISQ---P--LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
++ P L + GH +S + N + S S D+ +++W + EN+
Sbjct: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 384 LSWNK-YTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
LSWN + +L+++SD D V +WD+ E + + +A S +
Sbjct: 182 LSWNSNLSGHLLSASD-DHTVCLWDINAGPK--EGKIVDAKAIFTGHSAVVEDVAWHLLH 238
Query: 443 DCKVGSA--DHHIHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLR 496
+ GS D + +D R+ S+P H+ + H V+ + F +E LA+ S D ++
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 497 LWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
LWD++ L LHTF H +E V + +NE I S T+
Sbjct: 299 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTD 338
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
++W+ ++L S D + IWD T S + + H A + + +C S
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWD-TRSNTTSK-PSHLVDAHTAEVNCL--SFNPYSEFI 287
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVK 501
GSAD + +DLRN+ LH F HK + V + +NE LAS+ TD L +WD+
Sbjct: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Query: 502 E 502
+
Sbjct: 348 K 348
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 40/174 (22%), Positives = 85/174 (48%)
Query: 341 DELFASAGVSRRIKIFEF-SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDY 399
+ LF S +++ I++ S+ ++P H +V+ T ++++CLS+N Y++ ++A+
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPS--H--LVDAHT-AEVNCLSFNPYSEFILATGSA 293
Query: 400 DGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD-HHIHYYD 457
D V +WD+ + + +E H+ + V +S ++L S D ++ D I
Sbjct: 294 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 353
Query: 458 LRNISQ---P--LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
++ P L + GH +S + N + S S D+ +++W + EN+
Sbjct: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 384 LSWNK-YTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
LSWN + +L+++SD D V +WD+ E + + +A S +
Sbjct: 182 LSWNSNLSGHLLSASD-DHTVCLWDINAGPK--EGKIVDAKAIFTGHSAVVEDVAWHLLH 238
Query: 443 DCKVGSA--DHHIHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLR 496
+ GS D + +D R+ S+P H+ + H V+ + F +E LA+ S D ++
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 497 LWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
LWD++ L LHTF H +E V + +NE I S T+
Sbjct: 299 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTD 338
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
++W+ ++L S D + IWD T S + + H A + + +C S
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWD-TRSNTTSK-PSHLVDAHTAEVNCL--SFNPYSEFI 287
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVK 501
GSAD + +DLRN+ LH F HK + V + +NE LAS+ TD L +WD+
Sbjct: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Query: 502 E 502
+
Sbjct: 348 K 348
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 40/174 (22%), Positives = 85/174 (48%)
Query: 341 DELFASAGVSRRIKIFEF-SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDY 399
+ LF S +++ I++ S+ ++P H +V+ T ++++CLS+N Y++ ++A+
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPS--H--LVDAHT-AEVNCLSFNPYSEFILATGSA 293
Query: 400 DGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD-HHIHYYD 457
D V +WD+ + + +E H+ + V +S ++L S D ++ D I
Sbjct: 294 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 353
Query: 458 LRNISQ---P--LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
++ P L + GH +S + N + S S D+ +++W + EN+
Sbjct: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 384 LSWNK-YTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
LSWN + +L+++SD D V +WD+ E + + +A S +
Sbjct: 182 LSWNSNLSGHLLSASD-DHTVCLWDINAGPK--EGKIVDAKAIFTGHSAVVEDVAWHLLH 238
Query: 443 DCKVGSA--DHHIHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLR 496
+ GS D + +D R+ S+P H+ + H V+ + F +E LA+ S D ++
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 497 LWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
LWD++ L LHTF H +E V + +NE I S T+
Sbjct: 299 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTD 338
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
++W+ ++L S D + IWD T S + + H A + + +C S
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWD-TRSNTTSK-PSHLVDAHTAEVNCL--SFNPYSEFI 287
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVK 501
GSAD + +DLRN+ LH F HK + V + +NE LAS+ TD L +WD+
Sbjct: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Query: 502 E 502
+
Sbjct: 348 K 348
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 40/174 (22%), Positives = 85/174 (48%)
Query: 341 DELFASAGVSRRIKIFEF-SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDY 399
+ LF S +++ I++ S+ ++P H +V+ T ++++CLS+N Y++ ++A+
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPS--H--LVDAHT-AEVNCLSFNPYSEFILATGSA 293
Query: 400 DGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD-HHIHYYD 457
D V +WD+ + + +E H+ + V +S ++L S D ++ D I
Sbjct: 294 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 353
Query: 458 LRNISQ---P--LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
++ P L + GH +S + N + S S D+ +++W + EN+
Sbjct: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 384 LSWNK-YTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
LSWN + +L+++SD D V +WD+ E + + +A S +
Sbjct: 182 LSWNSNLSGHLLSASD-DHTVCLWDINAGPK--EGKIVDAKAIFTGHSAVVEDVAWHLLH 238
Query: 443 DCKVGSA--DHHIHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLR 496
+ GS D + +D R+ S+P H+ + H V+ + F +E LA+ S D ++
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 497 LWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
LWD++ L LHTF H +E V + +NE I S T+
Sbjct: 299 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTD 338
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
++W+ ++L S D + IWD T S + + H A + + +C S
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWD-TRSNTTSK-PSHLVDAHTAEVNCL--SFNPYSEFI 287
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVK 501
GSAD + +DLRN+ LH F HK + V + +NE LAS+ TD L +WD+
Sbjct: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Query: 502 E 502
+
Sbjct: 348 K 348
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 40/174 (22%), Positives = 85/174 (48%)
Query: 341 DELFASAGVSRRIKIFEF-SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDY 399
+ LF S +++ I++ S+ ++P H +V+ T ++++CLS+N Y++ ++A+
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPS--H--LVDAHT-AEVNCLSFNPYSEFILATGSA 293
Query: 400 DGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD-HHIHYYD 457
D V +WD+ + + +E H+ + V +S ++L S D ++ D I
Sbjct: 294 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 353
Query: 458 LRNISQ---P--LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
++ P L + GH +S + N + S S D+ +++W + EN+
Sbjct: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 384 LSWNK-YTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
LSWN + +L+++SD D V +WD+ E + + +A S +
Sbjct: 182 LSWNSNLSGHLLSASD-DHTVCLWDINAGPK--EGKIVDAKAIFTGHSAVVEDVAWHLLH 238
Query: 443 DCKVGSA--DHHIHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLR 496
+ GS D + +D R+ S+P H+ + H V+ + F +E LA+ S D ++
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 497 LWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
LWD++ L LHTF H +E V + +NE I S T+
Sbjct: 299 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTD 338
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
++W+ ++L S D + IWD T S + + H A + + +C S
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWD-TRSNTTSK-PSHLVDAHTAEVNCL--SFNPYSEFI 287
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVK 501
GSAD + +DLRN+ LH F HK + V + +NE LAS+ TD L +WD+
Sbjct: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Query: 502 E 502
+
Sbjct: 348 K 348
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 40/174 (22%), Positives = 85/174 (48%)
Query: 341 DELFASAGVSRRIKIFEF-SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDY 399
+ LF S +++ I++ S+ ++P H +V+ T ++++CLS+N Y++ ++A+
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPS--H--LVDAHT-AEVNCLSFNPYSEFILATGSA 293
Query: 400 DGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD-HHIHYYD 457
D V +WD+ + + +E H+ + V +S ++L S D ++ D I
Sbjct: 294 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 353
Query: 458 LRNISQ---P--LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
++ P L + GH +S + N + S S D+ +++W + EN+
Sbjct: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 384 LSWNK-YTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
LSWN + +L+++SD D V +WD+ E + + +A S +
Sbjct: 182 LSWNSNLSGHLLSASD-DHTVCLWDINAGPK--EGKIVDAKAIFTGHSAVVEDVAWHLLH 238
Query: 443 DCKVGSA--DHHIHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLR 496
+ GS D + +D R+ S+P H+ + H V+ + F +E LA+ S D ++
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 497 LWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
LWD++ L LHTF H +E V + +NE I S T+
Sbjct: 299 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTD 338
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
++W+ ++L S D + IWD T S + + H A + + +C S
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWD-TRSNTTSK-PSHLVDAHTAEVNCL--SFNPYSEFI 287
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVK 501
GSAD + +DLRN+ LH F HK + V + +NE LAS+ TD L +WD+
Sbjct: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Query: 502 E 502
+
Sbjct: 348 K 348
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 40/174 (22%), Positives = 85/174 (48%)
Query: 341 DELFASAGVSRRIKIFEF-SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDY 399
+ LF S +++ I++ S+ ++P H +V+ T ++++CLS+N Y++ ++A+
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPS--H--LVDAHT-AEVNCLSFNPYSEFILATGSA 293
Query: 400 DGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD-HHIHYYD 457
D V +WD+ + + +E H+ + V +S ++L S D ++ D I
Sbjct: 294 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 353
Query: 458 LRNISQ---P--LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
++ P L + GH +S + N + S S D+ +++W + EN+
Sbjct: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 135 (52.6 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 38/153 (24%), Positives = 67/153 (43%)
Query: 396 SSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHY 455
S +D + +WD+T S ++ H + SV FS ++ ++SGS D + +
Sbjct: 87 SGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFS-SDNRQIISGSRDATIKV------W 139
Query: 456 YDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTFRGHTN 514
L L H+ VS ++F N + S S D+ +++WD+K HT HT
Sbjct: 140 NTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTG 199
Query: 515 EKNFVGLTVNNEYIACGSETNEVFVYHKAISKP 547
N V ++ + A G + ++ + KP
Sbjct: 200 YVNTVTISPDGSLCASGGKDTFACLWELSSGKP 232
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 119 (46.9 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 36/138 (26%), Positives = 65/138 (47%)
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV-SGSDDCKVGSAD 450
+L + D +WD+ T + +M E H K + ++FS + SG + CKV
Sbjct: 378 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKV---- 433
Query: 451 HHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDVKENLPLHT 508
+DLR + ++ H+ V+ VKF + N L + + D++ ++W PL T
Sbjct: 434 -----WDLRQ-RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKT 487
Query: 509 FRGHTNEKNFVGLTVNNE 526
GH E +GL ++++
Sbjct: 488 LAGH--EGKVMGLDISSD 503
Score = 110 (43.8 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 40/148 (27%), Positives = 62/148 (41%)
Query: 394 IASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHI 453
+AS DG V +W + + + V + E H R V + PS G+ C D
Sbjct: 296 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMW---HPSGRFLGTT-CY----DRSW 347
Query: 454 HYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELA-SASTDSSLRLWDVKENLPLHTFRGH 512
+DL + LH GH V + F + LA + D+ R+WD++ + GH
Sbjct: 348 RLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGH 406
Query: 513 TNEKNFVGLTVNNEYIACGSETNEVFVY 540
E + + N +IA GS N V+
Sbjct: 407 LKEIYGINFSPNGYHIATGSGDNTCKVW 434
Score = 65 (27.9 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 35/155 (22%), Positives = 69/155 (44%)
Query: 132 GLLSLLVAKKRKLEQEEAETNMQILLNFLHCLRKQKLE---ELNEIQADLRCIEEDVYAV 188
G +++ + ++E+ +E ++L F R +++ + +E++A LR + E +
Sbjct: 63 GNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLF 122
Query: 189 EKHKIELYRARGRCLAKLRTFDDFTASKKTDEKAQISSQGLLMKDACGGPDSPYASQSGL 248
+ E R R R + + D +KK DEK++ S + GP+S ++ L
Sbjct: 123 GEGPAER-RERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVAR--L 179
Query: 249 TAARKQRVRAQLNDLKEYYLQKRRQSTAQSHKEDE 283
A RA + L+E L K T ++ + E
Sbjct: 180 WIANYSLPRA-MKRLEEARLHKEIPETTRTSQMQE 213
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 137 (53.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 42/177 (23%), Positives = 84/177 (47%)
Query: 378 RSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPS-M 436
R ++C++++ +L + S+ D + IWD + + H + +D+ + + +
Sbjct: 114 RDAVTCVAFHPVFTSLASGSE-DCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTL 172
Query: 437 LVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSS 494
L S S D + D Y ++R +S GH +VS V+FL++N+ L SAS D +
Sbjct: 173 LASCSSDLTIKLWDPSKDYANIRTLS-------GHDHSVSSVRFLTSNDNHLISASRDGT 225
Query: 495 LRLWDVKENLPLHTFRGHTNEK-NFVGLTVNNEYIACGSETNEVFVYHKAISKPAAS 550
LR+WDV + + T V + + +++ G + V+ + ++P A+
Sbjct: 226 LRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAA 282
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 137 (53.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 42/177 (23%), Positives = 84/177 (47%)
Query: 378 RSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPS-M 436
R ++C++++ +L + S+ D + IWD + + H + +D+ + + +
Sbjct: 114 RDAVTCVAFHPVFTSLASGSE-DCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTL 172
Query: 437 LVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSS 494
L S S D + D Y ++R +S GH +VS V+FL++N+ L SAS D +
Sbjct: 173 LASCSSDLTIKLWDPSKDYANIRTLS-------GHDHSVSSVRFLTSNDNHLISASRDGT 225
Query: 495 LRLWDVKENLPLHTFRGHTNEK-NFVGLTVNNEYIACGSETNEVFVYHKAISKPAAS 550
LR+WDV + + T V + + +++ G + V+ + ++P A+
Sbjct: 226 LRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAA 282
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 138 (53.6 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 63/268 (23%), Positives = 113/268 (42%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
I ++++++ SAGV + I++ + E + +P P + W T
Sbjct: 282 IFALKWNKKGNYILSAGVDKTTIIWDAHT--GEAKQ-QFPFHSAPALD----VDWQNNTT 334
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPS--MLVSGSDDC--KVG 447
AS D + + + + V ++ H ++ + +PS +L S SDD K+
Sbjct: 335 --FASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKW---DPSGMLLASCSDDMTLKIW 389
Query: 448 SADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLH 507
S +DL+ S+ ++ + SN LASAS DS++RLWDV+ + +H
Sbjct: 390 SMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIH 449
Query: 508 TFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDADHVDDDMGSY 567
T H V + + +Y+A GS V +++ S+R G+ G
Sbjct: 450 TLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYR-GT---------GGI 499
Query: 568 FISAVCWKSDSPTMLTANRKGAIKVLVL 595
F VCW + + + G++ VL L
Sbjct: 500 F--EVCWNARGDKVGASASDGSVCVLDL 525
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 138 (53.6 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 63/268 (23%), Positives = 113/268 (42%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
I ++++++ SAGV + I++ + E + +P P + W T
Sbjct: 282 IFALKWNKKGNYILSAGVDKTTIIWDAHT--GEAKQ-QFPFHSAPALD----VDWQNNTT 334
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPS--MLVSGSDDC--KVG 447
AS D + + + + V ++ H ++ + +PS +L S SDD K+
Sbjct: 335 --FASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKW---DPSGMLLASCSDDMTLKIW 389
Query: 448 SADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLH 507
S +DL+ S+ ++ + SN LASAS DS++RLWDV+ + +H
Sbjct: 390 SMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIH 449
Query: 508 TFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDADHVDDDMGSY 567
T H V + + +Y+A GS V +++ S+R G+ G
Sbjct: 450 TLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYR-GT---------GGI 499
Query: 568 FISAVCWKSDSPTMLTANRKGAIKVLVL 595
F VCW + + + G++ VL L
Sbjct: 500 F--EVCWNARGDKVGASASDGSVCVLDL 525
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 135 (52.6 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 34/149 (22%), Positives = 73/149 (48%)
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
+L+ S+ D V +WD T + V + H S + P + +GSDD G+
Sbjct: 112 SLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDD---GT--- 165
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTFRG 511
+ +D+R + +H F + +S +++++ S D+ +++WD+++N +++ +G
Sbjct: 166 -VKLWDIRKKAS-VHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQG 223
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H + + L+ + Y+ S N V V+
Sbjct: 224 HGDSVTGLSLSADGSYLLSNSMDNSVRVW 252
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 128 (50.1 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 53/220 (24%), Positives = 101/220 (45%)
Query: 324 DLFHAA---NIISSIEFDRDDELFASAGVSRRIKIFEFSS--VVNEPRDVHYPMV-EMPT 377
DL H +++ + F D + + + G +R +IF+ ++ V +D + ++
Sbjct: 291 DLVHTLQHESVVCCVRFSADGK-YVATGCNRSAQIFDVNTGEKVCVLQDDNADTTGDLYI 349
Query: 378 RSKLSCLSWN-KYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSM 436
RS C S + KY +A+ D + +WD+TT +++ HE+ +S+DF+ +
Sbjct: 350 RSV--CFSPDGKY----LATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFA-RDGRT 402
Query: 437 LVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSL 495
+ SGS D + +D+ N L VF + V+ V + + +A+ S D S+
Sbjct: 403 IASGS-------GDRTVRLWDIEN-GTALTVFT-IEDGVTTVAISPDTKYVAAGSLDKSV 453
Query: 496 RLWDVKENLPLHTFRG---HTNEKNFVGLTVNNEYIACGS 532
R+WD+ + P+ G H + V + N + GS
Sbjct: 454 RVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGS 493
Score = 57 (25.1 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 130 LDGLLSLLVAKKRKLEQEEAETNMQILLNFLHCLRKQKLEELNEIQADLRCIEEDVYAVE 189
L+G+ + A R E E + N QI N +H +R +K+ ++ + L+ E+ A
Sbjct: 26 LEGIRAEFEASARAAENYEHQINTQI--NEMHMVR-EKVYQMEQTHVQLKAKYEEELAHL 82
Query: 190 KHKIE 194
+ ++E
Sbjct: 83 RRQLE 87
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 137 (53.3 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 384 LSWNK-YTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
LSWN + +L+++SD D V +WD+ E + + +A S +
Sbjct: 226 LSWNSNLSGHLLSASD-DHTVCLWDINAGPK--EGKIVDAKAIFTGHSAVVEDVAWHLLH 282
Query: 443 DCKVGSA--DHHIHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLR 496
+ GS D + +D R+ S+P H+ + H V+ + F +E LA+ S D ++
Sbjct: 283 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 342
Query: 497 LWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
LWD++ L LHTF H +E V + +NE I S T+
Sbjct: 343 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTD 382
Score = 132 (51.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
++W+ ++L S D + IWD T S + + H A + + +C S
Sbjct: 276 VAWHLLHESLFGSVADDQKLMIWD-TRSNTTSK-PSHLVDAHTAEVNCL--SFNPYSEFI 331
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVK 501
GSAD + +DLRN+ LH F HK + V + +NE LAS+ TD L +WD+
Sbjct: 332 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 391
Query: 502 E 502
+
Sbjct: 392 K 392
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 40/174 (22%), Positives = 85/174 (48%)
Query: 341 DELFASAGVSRRIKIFEF-SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDY 399
+ LF S +++ I++ S+ ++P H +V+ T ++++CLS+N Y++ ++A+
Sbjct: 283 ESLFGSVADDQKLMIWDTRSNTTSKPS--H--LVDAHT-AEVNCLSFNPYSEFILATGSA 337
Query: 400 DGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD-HHIHYYD 457
D V +WD+ + + +E H+ + V +S ++L S D ++ D I
Sbjct: 338 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 397
Query: 458 LRNISQ---P--LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
++ P L + GH +S + N + S S D+ +++W + EN+
Sbjct: 398 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 451
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 137 (53.3 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 384 LSWNK-YTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
LSWN + +L+++SD D V +WD+ E + + +A S +
Sbjct: 226 LSWNSNLSGHLLSASD-DHTVCLWDINAGPK--EGKIVDAKAIFTGHSAVVEDVAWHLLH 282
Query: 443 DCKVGSA--DHHIHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLR 496
+ GS D + +D R+ S+P H+ + H V+ + F +E LA+ S D ++
Sbjct: 283 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 342
Query: 497 LWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
LWD++ L LHTF H +E V + +NE I S T+
Sbjct: 343 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTD 382
Score = 132 (51.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDD 443
++W+ ++L S D + IWD T S + + H A + + +C S
Sbjct: 276 VAWHLLHESLFGSVADDQKLMIWD-TRSNTTSK-PSHLVDAHTAEVNCL--SFNPYSEFI 331
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVK 501
GSAD + +DLRN+ LH F HK + V + +NE LAS+ TD L +WD+
Sbjct: 332 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 391
Query: 502 E 502
+
Sbjct: 392 K 392
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 40/174 (22%), Positives = 85/174 (48%)
Query: 341 DELFASAGVSRRIKIFEF-SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDY 399
+ LF S +++ I++ S+ ++P H +V+ T ++++CLS+N Y++ ++A+
Sbjct: 283 ESLFGSVADDQKLMIWDTRSNTTSKPS--H--LVDAHT-AEVNCLSFNPYSEFILATGSA 337
Query: 400 DGIVTIWDVTTSQSVME-YEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD-HHIHYYD 457
D V +WD+ + + +E H+ + V +S ++L S D ++ D I
Sbjct: 338 DKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 397
Query: 458 LRNISQ---P--LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
++ P L + GH +S + N + S S D+ +++W + EN+
Sbjct: 398 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 451
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 138 (53.6 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 39/147 (26%), Positives = 71/147 (48%)
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
L AS D + +WD+ T +S++ ++ H K +SV+FS L SG +D +
Sbjct: 395 LAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFS-PNGYHLASGGED-------NQ 446
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENLPLHTFR 510
+DLR + + L++ H VS VK+ LA+AS D + +W ++ + +
Sbjct: 447 CRIWDLR-MRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLA 505
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEV 537
GH ++ + +T ++ IA S +
Sbjct: 506 GHESKVASLDITADSSCIATVSHDRTI 532
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 52/216 (24%), Positives = 88/216 (40%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
++ F RD ++ A+ +S K++E V N V E T S +
Sbjct: 258 LTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIA-VLKDHKERATDVVFSPVD------ 310
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
+ +A++ D +W T + +E H R V F PS G+ S D
Sbjct: 311 DCLATASADRTAKLWK-TDGTLLQTFEGHLDRLARVAF---HPSGKYLGTT-----SYDK 361
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELA-SASTDSSLRLWDVKENLPLHTFR 510
+D+ N L + GH ++V + F + LA S DS R+WD++ + F+
Sbjct: 362 TWRLWDI-NTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQ 420
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
GH V + N ++A G E N+ ++ + K
Sbjct: 421 GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRK 456
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 122 (48.0 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 33/100 (33%), Positives = 49/100 (49%)
Query: 405 IWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQP 464
IWD T S + + H A + + +C S GSAD + +DLRN+
Sbjct: 2 IWD-TRSNNTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLK 57
Query: 465 LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
LH F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 58 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 97
Score = 109 (43.4 bits), Expect = 0.00066, P = 0.00066
Identities = 31/137 (22%), Positives = 63/137 (45%)
Query: 379 SKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSML 437
++++CLS+N Y++ ++A+ D V +WD+ + + +E H+ + V +S ++L
Sbjct: 22 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 81
Query: 438 VSGSDD--------CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LA 487
S D K+G D + L + GH +S + N +
Sbjct: 82 ASSGTDRRLNVWDLSKIGEEQSPEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVIC 139
Query: 488 SASTDSSLRLWDVKENL 504
S S D+ +++W + EN+
Sbjct: 140 SVSEDNIMQVWQMAENI 156
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 140 (54.3 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 43/169 (25%), Positives = 76/169 (44%)
Query: 359 SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYE 418
+++++ P +H M E ++ ++ + K LIA+ D + +W + +
Sbjct: 471 AALISGPETLHAQMTERGHDKDINSVAVSPNDK-LIATGSQDRLAKLWSCPDCSLLGVFT 529
Query: 419 EHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYV 478
H++ W V FS + + S SAD + + L++ S L F GH +V +
Sbjct: 530 GHKRGIWCVQFSPVDQILATS--------SADGTLKLWGLQDFSC-LKTFEGHDASVLKI 580
Query: 479 KFLSNN-ELASASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNE 526
F+S +L S +D L+LW +K N + T GH E GL N +
Sbjct: 581 IFVSRGTQLLSGGSDGLLKLWTIKTNECVKTLDGH--EDKIWGLHTNKQ 627
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 119 (46.9 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 36/138 (26%), Positives = 65/138 (47%)
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLV-SGSDDCKVGSAD 450
+L + D +WD+ T + +M E H K + ++FS + SG + CKV
Sbjct: 377 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKV---- 432
Query: 451 HHIHYYDLRNISQPLHVFNGHKKAVSYVKF--LSNNELASASTDSSLRLWDVKENLPLHT 508
+DLR + ++ H+ V+ VKF + N L + + D++ ++W PL T
Sbjct: 433 -----WDLRQ-RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKT 486
Query: 509 FRGHTNEKNFVGLTVNNE 526
GH E +GL ++++
Sbjct: 487 LAGH--EGKVMGLDISSD 502
Score = 114 (45.2 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 44/160 (27%), Positives = 68/160 (42%)
Query: 382 SCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGS 441
S +S ++ NL AS DG V +W + + + V + E H R V + PS G+
Sbjct: 284 STVSLDQKDVNL-ASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTW---HPSGRFLGT 339
Query: 442 DDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELA-SASTDSSLRLWDV 500
C D +DL + LH GH V + F + LA + D+ R+WD+
Sbjct: 340 T-CY----DRSWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDL 393
Query: 501 KENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
+ + GH E + + N +IA GS N V+
Sbjct: 394 RTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVW 433
Score = 64 (27.6 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 36/167 (21%), Positives = 74/167 (44%)
Query: 120 QQGCEVSVKELDGLLSLLVAKKRKLEQEEAETNMQILLNFLHCLRKQKLE---ELNEIQA 176
++G + ++ G +++ + ++E+ +E ++L F R +++ + +E++A
Sbjct: 52 KEGLKAGIEA--GNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKA 109
Query: 177 DLRCIEEDVYAVEKHKIELYRARGRCLAKLRTFDDFTASKKTDEKAQISSQGLLMKDACG 236
LR + E + + E R R R + + D +KK DEK++ S +
Sbjct: 110 CLRALGEPITLFGEGPAER-RERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHE 168
Query: 237 GPDSPYASQSGLTAARKQRVRAQLNDLKEYYLQKRRQSTAQSHKEDE 283
GP S ++ L A RA + L+E L K T ++ + E
Sbjct: 169 GPHSLKVAR--LWIANYSLPRA-MKRLEEARLHKEIPETTRTSQMQE 212
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 145 (56.1 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 40/151 (26%), Positives = 67/151 (44%)
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD 450
K I S DG +W T ++++Y H W V FS P + S D
Sbjct: 415 KEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFS---PFGYYFAT-----ASHD 466
Query: 451 HHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTF 509
+D+ + + PL VF GH+ V V F N LA+ S+D + R+WDV+ + F
Sbjct: 467 QTARLWDVEHAA-PLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVF 525
Query: 510 RGHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
H + + + ++ + +A E+ + V+
Sbjct: 526 NAHHSPVSALCMSADGLSLASADESGIIKVW 556
Score = 39 (18.8 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 145 EQEEAETNMQILLNFLHCL--RKQKLEELNE--IQADLRCIEEDVYAVEKHKIEL 195
E +EA+ N Q +++ + ++L + N+ IQ LR + E+V K+ +E+
Sbjct: 208 EMDEAK-NEQTIISEQEGIPGHSEQLLDYNKQSIQLGLRPLSEEVVTTLKNLLEV 261
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 8/35 (22%), Positives = 20/35 (57%)
Query: 127 VKELDGLLSLLVAKKRKLEQEEAETNMQILLNFLH 161
+K++D +SLL +++ L + T+ + + +H
Sbjct: 312 MKDIDYFVSLLESEQNSLILGKNATDPSVFMYTMH 346
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 140 (54.3 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 56/229 (24%), Positives = 96/229 (41%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSK---LSCLSWNK 388
+ + F + A G+ IF +S ++ +D ++P+ M + K SC
Sbjct: 110 VMTCAFSPSGQSVACGGLDSVCSIFNLNSPID--KDGNHPVSRMLSGHKGYVSSCQYVPD 167
Query: 389 YTKNLIASSDYDGIVTIWDVTTS--QSVM--EYEE-HEKRAWSVDFSCTEPSMLVSGSDD 443
+LI SS D +WD+TT SV E++ H SV S + P + VSGS
Sbjct: 168 EDTHLITSSG-DQTCVLWDITTGLRTSVFGGEFQSGHTADVQSVSISSSNPRLFVSGS-- 224
Query: 444 CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVKE 502
C D +D R S+ F GH+ V+ VKF + N + S D + RL+D++
Sbjct: 225 C-----DTTARLWDTRVASRAQRTFYGHEGDVNTVKFFPDGNRFGTGSEDGTCRLFDIRT 279
Query: 503 NLPLHTFR-----GHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISK 546
L + G + +++ + G + +V+ ++K
Sbjct: 280 EHQLQVYYQPHGDGDIPHVTSMAFSISGRLLFVGYSNGDCYVWDTLLAK 328
Score = 37 (18.1 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 260 LNDLKEYYLQKRRQ 273
+NDL+E QKR Q
Sbjct: 17 VNDLREKLKQKRLQ 30
>TAIR|locus:2166315 [details] [associations]
symbol:AT5G63010 "AT5G63010" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0080008 EMBL:AB009051
UniGene:At.49209 UniGene:At.68259 OMA:DTEYSAD HOGENOM:HOG000240907
UniGene:At.43098 IPI:IPI00522354 RefSeq:NP_201106.1
ProteinModelPortal:Q9FM51 SMR:Q9FM51 PRIDE:Q9FM51
EnsemblPlants:AT5G63010.1 GeneID:836421 KEGG:ath:AT5G63010
TAIR:At5g63010 InParanoid:Q9FM51 PhylomeDB:Q9FM51
ProtClustDB:CLSN2687531 Genevestigator:Q9FM51 Uniprot:Q9FM51
Length = 343
Score = 134 (52.2 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 383 CLSWNKYTKNLIASSDYDGIVTIWDVTTS--QSVMEYEEHEKRAWSVDFSCTEPSMLVSG 440
CL W+ + +++ DG ++ T S ++V E++ H+ W+ F P+++ +G
Sbjct: 124 CLDWDPSSTSIVVGLS-DGSASVVSFTDSNLETVQEWKGHDFELWTASFDLNNPNLVYTG 182
Query: 441 SDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNN-----ELASASTDSSL 495
SDDCK +D+R+ VF K V +S+N + + S D +L
Sbjct: 183 SDDCKFSC-------WDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETL 235
Query: 496 RLWDVKE-NLPLH 507
R+WD + + PL+
Sbjct: 236 RVWDTRSVSRPLN 248
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 134 (52.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 38/136 (27%), Positives = 64/136 (47%)
Query: 378 RSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSML 437
R + L W++ ++I S+ D + WD+TT + + Y HE+ S+D S +L
Sbjct: 103 RGAILDLQWSR-DSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEIL 161
Query: 438 VSGSDDCKVGSAD-HHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLR 496
SGSDD +G D H D P+ A+S + NE+ S D+ ++
Sbjct: 162 FSGSDDGTIGIWDPRKKHAADYIESDFPVTAV-----AISE----AGNEIYSGGIDNDIK 212
Query: 497 LWDVKENLPLHTFRGH 512
+WDV++ ++ GH
Sbjct: 213 VWDVRKKAVVYNMAGH 228
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 147 (56.8 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 40/122 (32%), Positives = 61/122 (50%)
Query: 394 IASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHI 453
+ S D + +W+ T Q + Y HE SVDF T S +VSGS ADH +
Sbjct: 436 LISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDF--TNKS-IVSGS-------ADHTV 485
Query: 454 HYYDLRNISQPLHVFNGHKKAVSYVKFLS-NNELASASTDSSLRLWDVKENLPLHTFRGH 512
+ + S+ + GH V++VK S +N + SAS D+++R+WD+ N + F G
Sbjct: 486 RVWHVD--SRTCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVFGGM 543
Query: 513 TN 514
N
Sbjct: 544 EN 545
Score = 140 (54.3 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 381 LSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSG 440
++CL +N+ K L+ S YD + IW + + + V H K ++ F + L+SG
Sbjct: 386 VTCLQFNR--KYLMTGS-YDTTIKIWKIDSGECVKTLTGHTKGVRALVF---DNQKLISG 439
Query: 441 SDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDV 500
D + ++H Q + + GH+ AV V F +N + S S D ++R+W V
Sbjct: 440 GLDSTIKVWNYHT--------GQCIATYRGHEDAVVSVDF-TNKSIVSGSADHTVRVWHV 490
Query: 501 KENLPLHTFRGHTNEKNFVGL-TVNNEYIACGSET 534
++ +T RGHT+ N V + + +N + +T
Sbjct: 491 -DSRTCYTLRGHTDWVNHVKIHSASNTIFSASDDT 524
Score = 38 (18.4 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 62 YTCIFTHLRNKSDCPCCGCHLTCKHI 87
Y C H+ K CP CG L H+
Sbjct: 259 YMCQ-QHIDRK--CPNCGWGLPLMHM 281
Score = 38 (18.4 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 108 AASPIEHLRLALQ----QGCEVSVKELDGLLSLLVAKKRKLEQEEAETNMQILLNFLHC 162
+A+P++H +L LQ Q C + + +S L+ K + E +++IL +L C
Sbjct: 178 SAAPVQHRQLILQGLLSQCCFPQLSFISQEVSSLI-KIDFISTLPQEISLKILC-YLDC 234
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 139 (54.0 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 43/154 (27%), Positives = 74/154 (48%)
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
+L+A+ DG+V IWD+ + + ++ ++ H K+ SVD+S L S S+D +
Sbjct: 443 SLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWS-PNGYQLASSSED-------N 494
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKF------LSNNE----------LASASTDSSL 495
+ +D+R Q + H VS VKF +NN LA+ S D +
Sbjct: 495 TVVIWDIRKKEQSCQIL-AHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSFDGKI 553
Query: 496 RLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIA 529
+ W PL TF GH+++ + LT N++ ++
Sbjct: 554 KTWSPNTWSPLATFEGHSSKVTSIDLT-NSKILS 586
Score = 44 (20.5 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 23/85 (27%), Positives = 41/85 (48%)
Query: 113 EHLRLALQQGCEVSVKELDGLLSLLVAKKRKLEQEEAETNMQILLNFL-HCLRKQKLEEL 171
EH R L++ + +DG L+ KK + EQE+ E + + NFL + K +
Sbjct: 98 EHRRSRLRE-ILIERNIIDGTPLLISNKKEQEEQEQLEGSDEE--NFLTEGTEELKTARI 154
Query: 172 NEIQADLRCIEEDVYAVEKHK-IEL 195
N L+ ++ + ++K + IEL
Sbjct: 155 NISIYSLKKSQQRLLHLKKQREIEL 179
Score = 41 (19.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 244 SQSGLTAARKQR-----VRAQLNDLKEYY---LQKRRQSTAQSHKEDEGDLYAVSRE 292
SQ L +KQR ++ + ++LK + QKR Q + H++ E D + E
Sbjct: 164 SQQRLLHLKKQREIELSIQKENDNLKNQFEEKQQKRIQKKLRLHQQLENDNMNIDEE 220
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 134 (52.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 56/252 (22%), Positives = 106/252 (42%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ + ++ D + SA + + +++ S E ++ T SC + +
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWD--SETGE----RVKRLKGHTSFVNSCYPARRGPQ 166
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
+ SD DG V +WD+ ++ ++ + + +V F+ T SD G D+
Sbjct: 167 LVCTGSD-DGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDT--------SDQIISGGIDN 216
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLP----L 506
I +DLR ++ + GH +V+ + S L S + D+++R+WDV+ P +
Sbjct: 217 DIKVWDLRQ-NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 507 HTFRG--HTNEKNFV--GLTVNNEYIACGSETNEVFVYHKAISKPAAS---HRFGSDADH 559
F+G H EKN + + + IA GS + ++ +H + HR D
Sbjct: 276 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHSLSVRSLGQIPRHRLSRQEDS 335
Query: 560 VDDDMGSYFISA 571
V G +SA
Sbjct: 336 VKPQEGIXILSA 347
Score = 127 (49.8 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 45/205 (21%), Positives = 95/205 (46%)
Query: 336 EFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIA 395
+F + ASAG R I ++ SV + D +Y ++ + + + L +N +++
Sbjct: 74 KFHPNGSTLASAGFDRLILLW---SVYGDC-D-NYATLKGHSGAVME-LHYNT-DGSMLF 126
Query: 396 SSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHY 455
S+ D V +WD T + V + H S + P ++ +GSDD G+ +
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDD---GT----VKL 179
Query: 456 YDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTFRGHTNE 515
+D+R + F + ++ +++++ S D+ +++WD+++N +T RGH +
Sbjct: 180 WDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS 238
Query: 516 KNFVGLTVNNEYIACGSETNEVFVY 540
+ L+ Y+ + N V V+
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVW 263
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 45/178 (25%), Positives = 79/178 (44%)
Query: 383 CLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
C ++ + +++ SD D V +WD ++ Q + + E + VDF PS S
Sbjct: 149 CARFSPDGQLMVSVSD-DRTVKLWDASSRQLIHTFCEPGGYSSYVDF---HPS-----ST 199
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVK 501
S+D+ + +D+R + H + H AV+ + F S N L +AS+DS+L++ D+
Sbjct: 200 CIATASSDNTVRVWDIRTHTLLQH-YQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLL 258
Query: 502 ENLPLHTFRGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDADH 559
E L+T GH + V + + + A +V V+ S DH
Sbjct: 259 EGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRTNFDSVDYSRVLQQKRDH 316
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 37/125 (29%), Positives = 71/125 (56%)
Query: 381 LSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCT--EPSMLV 438
+S +S K K IAS D V + D+ + +++ EY+ H+ + + ++ SC+ + S+++
Sbjct: 211 ISSVSITKDKKCFIASCT-DETVKLIDIDSYETLKEYKGHKNKVYKIN-SCSNFDDSLII 268
Query: 439 SGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYV-KFLSNNELASASTDSSLRL 497
SGS+D D +I Y+L + + L +GH +++V S N+ ++STD ++R+
Sbjct: 269 SGSED-----NDFYI--YELLS-GKLLSKLSGHSNIITHVDSHPSKNQFITSSTDCTIRI 320
Query: 498 WDVKE 502
WD E
Sbjct: 321 WDQSE 325
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 52/214 (24%), Positives = 96/214 (44%)
Query: 332 ISSIE-FDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYT 390
ISSI F + L S + R+K++E V E R + R + ++WN
Sbjct: 288 ISSIRWFPKTAHLLLSGSMDCRVKLWE---VYGERRCIR---TFSGHRQAIKDIAWNNRG 341
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDF--SCTEPSMLVSGSDDCKVGS 448
N +++S YD + +WD T V + K + V F ++ + V+G+ D K
Sbjct: 342 TNFLSAS-YDRYIKLWDAETGDVVSRFTTR-KMPFCVKFHPDNSKQHLFVAGTSDKK--- 396
Query: 449 ADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLH 507
I +D R+ + ++ H +VS + F+ +N + S D S+R+W+ + +
Sbjct: 397 ----IICWDTRS-GDIVQEYDRHLGSVSTITFVDDNRRFVTTSDDKSMRIWEWDIPVDMK 451
Query: 508 TFRGHT-NEKNFVGLTVNNEYIACGSETNEVFVY 540
T + V L N +++AC S N++ ++
Sbjct: 452 YIADPTMHSMPAVTLAPNGKWMACQSLDNKIVIF 485
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 384 LSWNKYTK-NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
LSWN K +L+++SD D V +WD++ E + + +A S +
Sbjct: 181 LSWNSNLKGHLLSASD-DHTVCLWDISAGPK--EGKIVDAKAIFTGHSAVVEDVAWHLLH 237
Query: 443 DCKVGSA--DHHIHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLR 496
+ GS D + +D R+ S+P H + H V+ + F +E LA+ S D ++
Sbjct: 238 ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 297
Query: 497 LWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 298 LWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTD 337
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 42/159 (26%), Positives = 72/159 (45%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA + +++ S+ E + V + + + ++W+ ++L S D + I
Sbjct: 193 SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 252
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 253 WD-TRSNTTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 308
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V + +NE LAS+ TD L +WD+ +
Sbjct: 309 HSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
Score = 119 (46.9 bits), Expect = 0.00059, P = 0.00059
Identities = 40/174 (22%), Positives = 84/174 (48%)
Query: 341 DELFASAGVSRRIKIFEF-SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDY 399
+ LF S +++ I++ S+ ++P H V+ T ++++CLS+N Y++ ++A+
Sbjct: 238 ESLFGSVADDQKLMIWDTRSNTTSKPS--H--SVDAHT-AEVNCLSFNPYSEFILATGSA 292
Query: 400 DGIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD-HHIHYYD 457
D V +WD+ + + +E H+ + V +S ++L S D ++ D I
Sbjct: 293 DKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 352
Query: 458 LRNISQ---P--LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
++ P L + GH +S + N + S S D+ +++W + EN+
Sbjct: 353 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 406
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA + +++ S+ E + V V + + ++W+ ++L S D + I
Sbjct: 194 SASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD T S + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 254 WD-TRSNTTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 309
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V + +NE LAS+ TD L +WD+ +
Sbjct: 310 HSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 384 LSWNK-YTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSD 442
LSWN + +L+++SD D V +WD++ E + + +A S +
Sbjct: 182 LSWNSNLSGHLLSASD-DHTVCLWDISAGPK--EGKVVDAKAVFTGHSAVVEDVAWHLLH 238
Query: 443 DCKVGSA--DHHIHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLR 496
+ GS D + +D R+ S+P H + H V+ + F +E LA+ S D ++
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
Query: 497 LWDVKE-NLPLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
LWD++ L LH+F H +E V + +NE I S T+
Sbjct: 299 LWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTD 338
Score = 119 (46.9 bits), Expect = 0.00059, P = 0.00059
Identities = 40/174 (22%), Positives = 84/174 (48%)
Query: 341 DELFASAGVSRRIKIFEF-SSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDY 399
+ LF S +++ I++ S+ ++P H V+ T ++++CLS+N Y++ ++A+
Sbjct: 239 ESLFGSVADDQKLMIWDTRSNTTSKPS--H--SVDAHT-AEVNCLSFNPYSEFILATGSA 293
Query: 400 DGIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSAD-HHIHYYD 457
D V +WD+ + + +E H+ + V +S ++L S D ++ D I
Sbjct: 294 DKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 353
Query: 458 LRNISQ---P--LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
++ P L + GH +S + N + S S D+ +++W + EN+
Sbjct: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 52/208 (25%), Positives = 91/208 (43%)
Query: 343 LFASAGVSRRIKIFEFSSVVN--EPRDVHYPMVEMPTRSKLSC-LSWNKYTKNLIASSDY 399
+ A+ S + +F+++ + EP P + + K LSWN + S+
Sbjct: 143 VIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202
Query: 400 DGIVTIWDVTTSQS---VME----YEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
D + +WD+ + V++ + H V + S+ S +DD K
Sbjct: 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQK------- 255
Query: 453 IHYYDLRN--ISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE-NLPLH 507
+ +D RN S+P H + H V+ + F +E LA+ S D ++ LWD++ L LH
Sbjct: 256 LMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH 315
Query: 508 TFRGHTNEKNFVGLTVNNEYIACGSETN 535
+F H +E V + +NE I S T+
Sbjct: 316 SFESHKDEIFQVQWSPHNETILASSGTD 343
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/159 (25%), Positives = 71/159 (44%)
Query: 346 SAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTI 405
SA I +++ ++ E R + + + + ++W+ ++L S D + I
Sbjct: 199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMI 258
Query: 406 WDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPL 465
WD + + H A + + +C S GSAD + +DLRN+ L
Sbjct: 259 WDTRNNNT--SKPSHTVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKLKL 314
Query: 466 HVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
H F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 315 HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353
Score = 121 (47.7 bits), Expect = 0.00036, P = 0.00036
Identities = 41/180 (22%), Positives = 83/180 (46%)
Query: 341 DELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYD 400
+ LF S +++ I++ + N + H V+ T ++++CLS+N Y++ ++A+ D
Sbjct: 244 ESLFGSVADDQKLMIWDTRNN-NTSKPSH--TVDAHT-AEVNCLSFNPYSEFILATGSAD 299
Query: 401 GIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLR 459
V +WD+ + + +E H+ + V +S ++L S D +H +DL
Sbjct: 300 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG-------TDRRLHVWDLS 352
Query: 460 NISQ-----------P--LHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKENL 504
I + P L + GH +S + N + S S D+ +++W + EN+
Sbjct: 353 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 123 (48.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/105 (32%), Positives = 51/105 (48%)
Query: 400 DGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLR 459
D + IWD T S + + H A + + +C S GSAD + +DLR
Sbjct: 4 DQKLMIWD-TRSNNTSK-PSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLR 59
Query: 460 NISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE 502
N+ LH F HK + V++ +NE LAS+ TD L +WD+ +
Sbjct: 60 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 104
Score = 111 (44.1 bits), Expect = 0.00047, P = 0.00047
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 450 DHHIHYYDLR--NISQPLHVFNGHKKAVSYVKFLSNNE--LASASTDSSLRLWDVKE-NL 504
D + +D R N S+P H + H V+ + F +E LA+ S D ++ LWD++ L
Sbjct: 4 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 63
Query: 505 PLHTFRGHTNEKNFVGLTVNNEYIACGSETN 535
LH+F H +E V + +NE I S T+
Sbjct: 64 KLHSFESHKDEIFQVQWSPHNETILASSGTD 94
Score = 109 (43.4 bits), Expect = 0.00085, P = 0.00085
Identities = 31/137 (22%), Positives = 63/137 (45%)
Query: 379 SKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQ-SVMEYEEHEKRAWSVDFSCTEPSML 437
++++CLS+N Y++ ++A+ D V +WD+ + + +E H+ + V +S ++L
Sbjct: 29 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 88
Query: 438 VSGSDD--------CKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE--LA 487
S D K+G D + L + GH +S + N +
Sbjct: 89 ASSGTDRRLNVWDLSKIGEEQSPEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVIC 146
Query: 488 SASTDSSLRLWDVKENL 504
S S D+ +++W + EN+
Sbjct: 147 SVSEDNIMQVWQMAENI 163
>WB|WBGene00004895 [details] [associations]
symbol:smu-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IGI] [GO:0048666 "neuron development" evidence=IGI]
[GO:0002119 "nematode larval development" evidence=IGI] [GO:0040011
"locomotion" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0009792 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0048644 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0048666 HSSP:P16649 GO:GO:0007638 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:Z81490 EMBL:AF330595 PIR:T20276
RefSeq:NP_493279.1 UniGene:Cel.19360 ProteinModelPortal:G5EEG7
SMR:G5EEG7 IntAct:G5EEG7 EnsemblMetazoa:CC4.3 GeneID:173175
KEGG:cel:CELE_CC4.3 CTD:173175 WormBase:CC4.3 NextBio:878585
Uniprot:G5EEG7
Length = 510
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 44/189 (23%), Positives = 87/189 (46%)
Query: 326 FHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVE--MPTRSKLSC 383
F + S F D S I+++ + + +D+ Y + M + + C
Sbjct: 211 FSTKSYPESAVFSPDANYLVSGSKDGFIEVWNYMNGKLR-KDLKYQAQDNLMMMDAAVRC 269
Query: 384 LSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEE-HEKRAWSVDFSCTEPSMLVSGSD 442
+S+++ ++ ++A+ DG + +W V T + ++ H K +V FS + S ++SG +
Sbjct: 270 ISFSRDSE-MLATGSIDGKIKVWKVETGDCLRRFDRAHTKGVCAVRFS-KDNSHILSGGN 327
Query: 443 DCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSN-NELASASTDSSLRLWDVK 501
D H + + +++ + L GH ++ V++ N + S STD S+R+W K
Sbjct: 328 D-------HVVRVHGMKS-GKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVWHGK 379
Query: 502 ENLPLHTFR 510
L TFR
Sbjct: 380 SGECLSTFR 388
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 59/266 (22%), Positives = 111/266 (41%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
I ++++++ SAGV + I++ + E + + +P P + W +
Sbjct: 269 IFALKWNKKGNFILSAGVDKTTIIWDAHT--GEAKQL-FPFHSAPALD----VDWQ--SN 319
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDC--KVGSA 449
N AS D + + + + + ++ H ++ + T ++L S SDD K+ S
Sbjct: 320 NTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSM 378
Query: 450 DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSSLRLWDVKENLPLHTF 509
+DL+ ++ ++ +N LASAS DS++RLWDV + +HT
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTL 438
Query: 510 RGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAASHRFGSDADHVDDDMGSYFI 569
H V + + Y+A GS V +++ S+R G+ G F
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR-GT---------GGIF- 487
Query: 570 SAVCWKSDSPTMLTANRKGAIKVLVL 595
VCW + + + G++ VL L
Sbjct: 488 -EVCWNAAGDKVGASASDGSVCVLDL 512
Score = 129 (50.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 37/146 (25%), Positives = 65/146 (44%)
Query: 374 EMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTE 433
++P+ ++ L WN L+A+ YDG IW +H+ +++ ++
Sbjct: 221 DVPSNKDVTSLDWNS-EGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKG 278
Query: 434 PSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDS 493
+L +G D + D H + +F H V + SNN AS STD
Sbjct: 279 NFILSAGVDKTTI-IWDAHT--------GEAKQLFPFHSAPALDVDWQSNNTFASCSTDM 329
Query: 494 SLRLWDVKENLPLHTFRGHTNEKNFV 519
+ + + ++ P+ TF+GHTNE N +
Sbjct: 330 CIHVCKLGQDRPIKTFQGHTNEVNAI 355
>UNIPROTKB|A8XJ40 [details] [associations]
symbol:npp-20 "Protein SEC13 homolog" species:6238
"Caenorhabditis briggsae" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0005643 GO:GO:0000910
GO:GO:0051028 HOGENOM:HOG000216895 EMBL:HE601467
ProteinModelPortal:A8XJ40 STRING:A8XJ40 EnsemblMetazoa:CBG13889
WormBase:CBG13889 Uniprot:A8XJ40
Length = 306
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 64/247 (25%), Positives = 103/247 (41%)
Query: 314 LRVIAELRHGDLFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMV 373
+R + +H D H A + +I +R A+ G R +KIFE P YP++
Sbjct: 4 IRQRIDTQHRDAIHDAQL--NIYGNR----LATCGSDRLVKIFEV-----RPNGQSYPLI 52
Query: 374 EMPTRS-KLSCLSWN--KYTKNLIASSDYDGIVTIWDVTTS--QSVMEYEEHEKRAWSVD 428
E+ + + +SW KY L+AS+ YD V IW Q E+E HE SV
Sbjct: 53 ELSGHNGPVWKVSWAHPKYG-GLLASASYDKKVIIWQEVNGRWQKTYEWETHEASVTSVA 111
Query: 429 FSCTEPS-MLVSGSDDCKVGSADHHIHYYDLRNIS-QPLHVFNGHKKAVSYVKFL----- 481
F+ + ML S S D +G I +D + Q + N H + V+ V +
Sbjct: 112 FAPHQFGLMLASSSADGTIG-----ILRFDAQTQQWQSSRIQNCHDQGVNSVSWAPGTAD 166
Query: 482 --SNNELASASTDSSLRLWDVKENL-------PLHTFRGHTNEKNFVGLTVNNEY--IAC 530
SA D +++W + E L +H + E + +T ++ ++C
Sbjct: 167 PAGKKRFVSAGNDKLVKIWLLNEELNEWTCEKAIHCHKDFVREAAWCPVTNKGQHSIVSC 226
Query: 531 GSETNEV 537
G + N V
Sbjct: 227 GLDGNLV 233
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 42/159 (26%), Positives = 76/159 (47%)
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEY---EEHEK----RAWSVDFSCTEPSMLVSGSDDCK 445
L+AS D V +WD+ + V +Y +++ K ++S D T +L C
Sbjct: 187 LVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYS-DHMDTVSQVLFHPDGTCL 245
Query: 446 VGSA-DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVKEN 503
+ S+ DH I D+R+ H +N H V+ + LASA +DS +++WD+++
Sbjct: 246 ISSSFDHKIKITDIRSNKLIQH-YNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQG 304
Query: 504 LPLHTFRGHTNEKNFVGLTVNN--EYIACGSETNEVFVY 540
++T ++N+K+ + N +Y A G N V+
Sbjct: 305 RQIYTL--YSNDKDITTVQFNQSGDYFATGGSQNLCMVW 341
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 53/253 (20%), Positives = 105/253 (41%)
Query: 354 KIFEFSSVVNEPRDVHYPMVEMPTRSK---LSCLSWNKYTKNLIASSDYDGIVTIWDVTT 410
K+ SS + E + H P + R ++C ++ + +AS D IV +W+
Sbjct: 20 KLGNTSSKITEQQTTHDPALSRSFRGHEDIITCADFDPKMRQ-VASCSKDSIVYVWNFKP 78
Query: 411 SQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNG 470
Q ++ H+ + V +S P G G D I + + +
Sbjct: 79 QQRPFKFVGHKGAVYCVKYS---PD----GETIASCGQ-DRQIRLWQ-NTVQSKCSIIKA 129
Query: 471 HKKAVSYVKFLSNNE-LASASTDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIA 529
H A+ + F ++ L S+S D +L+LW +++ + +F GH N ++ + +A
Sbjct: 130 HCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVA 189
Query: 530 CGSETNEVFV----YHKAISKPAASH------RFGSDADHVDDDMGSYFISAVCWKSDSP 579
GS+ V + + K +SK + + S +DH+D +S V + D
Sbjct: 190 SGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDT------VSQVLFHPDGT 243
Query: 580 TMLTANRKGAIKV 592
+++++ IK+
Sbjct: 244 CLISSSFDHKIKI 256
>WB|WBGene00003806 [details] [associations]
symbol:npp-20 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0006997 "nucleus
organization" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0012507 GO:GO:0002119
GO:GO:0032940 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0010171 GO:GO:0040011
GO:GO:0000003 GO:GO:0005643 GO:GO:0000910 GO:GO:0051028
GO:GO:0006997 GO:GO:0051169 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:FO081581
RefSeq:NP_500086.1 RefSeq:NP_500087.1 ProteinModelPortal:Q9N4A7
SMR:Q9N4A7 DIP:DIP-25859N IntAct:Q9N4A7 MINT:MINT-1089120
STRING:Q9N4A7 PaxDb:Q9N4A7 PRIDE:Q9N4A7 EnsemblMetazoa:Y77E11A.13a
GeneID:176957 KEGG:cel:CELE_Y77E11A.13 UCSC:Y77E11A.13b CTD:176957
WormBase:Y77E11A.13a WormBase:Y77E11A.13b InParanoid:Q9N4A7
NextBio:894734 ArrayExpress:Q9N4A7 Uniprot:Q9N4A7
Length = 313
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 67/241 (27%), Positives = 102/241 (42%)
Query: 319 ELRHGDLFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTR 378
+ +H D H A + +I R A+ G R +KIFE P YPM E+
Sbjct: 9 DTQHRDAIHDAQL--NIYGSR----LATCGSDRLVKIFEV-----RPNGQSYPMAELVGH 57
Query: 379 S-KLSCLSWN--KYTKNLIASSDYDGIVTIWDVTTS--QSVMEYEEHEKRAWSVDFSCTE 433
S + +SW KY L+AS+ YD V IW+ Q E+ HE V F+ +
Sbjct: 58 SGPVWKVSWAHPKYG-GLLASASYDKKVIIWNEQQGRWQKAYEWAAHEASTTCVAFAPHQ 116
Query: 434 PS-MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL-------SNNE 485
ML S S D +G + Y + N + H++ V+ V + +
Sbjct: 117 YGLMLASASADGDIGI----LRYDNSSNEWISSKIQKCHEQGVNSVCWAPGSADPAAKKR 172
Query: 486 LASASTDSSLRLW---DVKENLPLH-TFRGHTN---EKNFVGLTVNNEY--IACGSETNE 536
L SA D ++++W D L T GHT+ E + +T N ++ ++CG E N
Sbjct: 173 LVSAGNDKNVKIWAFDDATNEWILEKTLAGHTDFVREAAWCPVTNNGQHTIVSCGMEGNL 232
Query: 537 V 537
V
Sbjct: 233 V 233
>UNIPROTKB|Q9N4A7 [details] [associations]
symbol:npp-20 "Protein SEC13 homolog" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051169 "nuclear transport" evidence=IC]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005643 "nuclear pore"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0012507 GO:GO:0002119
GO:GO:0032940 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0010171 GO:GO:0040011
GO:GO:0000003 GO:GO:0005643 GO:GO:0000910 GO:GO:0051028
GO:GO:0006997 GO:GO:0051169 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:FO081581
RefSeq:NP_500086.1 RefSeq:NP_500087.1 ProteinModelPortal:Q9N4A7
SMR:Q9N4A7 DIP:DIP-25859N IntAct:Q9N4A7 MINT:MINT-1089120
STRING:Q9N4A7 PaxDb:Q9N4A7 PRIDE:Q9N4A7 EnsemblMetazoa:Y77E11A.13a
GeneID:176957 KEGG:cel:CELE_Y77E11A.13 UCSC:Y77E11A.13b CTD:176957
WormBase:Y77E11A.13a WormBase:Y77E11A.13b InParanoid:Q9N4A7
NextBio:894734 ArrayExpress:Q9N4A7 Uniprot:Q9N4A7
Length = 313
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 67/241 (27%), Positives = 102/241 (42%)
Query: 319 ELRHGDLFHAANIISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTR 378
+ +H D H A + +I R A+ G R +KIFE P YPM E+
Sbjct: 9 DTQHRDAIHDAQL--NIYGSR----LATCGSDRLVKIFEV-----RPNGQSYPMAELVGH 57
Query: 379 S-KLSCLSWN--KYTKNLIASSDYDGIVTIWDVTTS--QSVMEYEEHEKRAWSVDFSCTE 433
S + +SW KY L+AS+ YD V IW+ Q E+ HE V F+ +
Sbjct: 58 SGPVWKVSWAHPKYG-GLLASASYDKKVIIWNEQQGRWQKAYEWAAHEASTTCVAFAPHQ 116
Query: 434 PS-MLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL-------SNNE 485
ML S S D +G + Y + N + H++ V+ V + +
Sbjct: 117 YGLMLASASADGDIGI----LRYDNSSNEWISSKIQKCHEQGVNSVCWAPGSADPAAKKR 172
Query: 486 LASASTDSSLRLW---DVKENLPLH-TFRGHTN---EKNFVGLTVNNEY--IACGSETNE 536
L SA D ++++W D L T GHT+ E + +T N ++ ++CG E N
Sbjct: 173 LVSAGNDKNVKIWAFDDATNEWILEKTLAGHTDFVREAAWCPVTNNGQHTIVSCGMEGNL 232
Query: 537 V 537
V
Sbjct: 233 V 233
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 58/201 (28%), Positives = 82/201 (40%)
Query: 393 LIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHH 452
++AS D V +WD T E H SV FS + +L SGS D V D
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFS-PDGRLLASGSFDKTVRLWDPA 767
Query: 453 IHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNEL-ASASTDSSLRLWDVKENLPLHTFRG 511
++ Q L GH V V F + L AS S D ++RLWD T RG
Sbjct: 768 TG-----SLQQTLR---GHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRG 819
Query: 512 HTNEKNFVGLTVNNEYIACGSETNEVFVYHKA--------ISKPAASH-RFGSDADHVDD 562
H++ V + + +A GS V ++ A I K + +F D ++
Sbjct: 820 HSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGTVTELQFSQDGSYIST 879
Query: 563 DMGSYFISAVCWK--SDSPTM 581
++GS I + C S SP M
Sbjct: 880 NLGSLNIQSRCGNNLSSSPKM 900
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 40/173 (23%), Positives = 79/173 (45%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTR-SKLSCLSWNKYT 390
+ + F ++ A G+ + + S D+ ++ T S +SC ++ + +
Sbjct: 113 VMACAFSPSSQMIACGGLDNKCSVVPLSF----EDDIIQKKRQVATHTSYMSCCTFLR-S 167
Query: 391 KNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDF-SCTEPSMLVSGSDDCKVGSA 449
NLI + D IWDV + Q + + H +++D C + +S A
Sbjct: 168 DNLILTGSGDSTCAIWDVESGQLIQNFHGHTGDVFAIDVPKCDTGNTFISAG-------A 220
Query: 450 DHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNE-LASASTDSSLRLWDVK 501
D H +D+R+ Q + F GH+ ++ V+F N + A+ S D++ RL+D++
Sbjct: 221 DKHSLVWDIRS-GQCVQSFEGHEADINTVRFHPNGDAFATGSDDATCRLFDLR 272
Score = 125 (49.1 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 42/165 (25%), Positives = 76/165 (46%)
Query: 380 KLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCT-EPS--M 436
K+ C+ W+ +++++SS DG V +WD T+ E+ W + +C PS M
Sbjct: 70 KVLCMDWSLDKRHIVSSSQ-DGKVIVWDGFTTNK--EHALTMPTTWVM--ACAFSPSSQM 124
Query: 437 LVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSL 495
+ G D K + + D +I Q H +S FL S+N + + S DS+
Sbjct: 125 IACGGLDNKCSVVP--LSFED--DIIQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTC 180
Query: 496 RLWDVKENLPLHTFRGHTNEKNFVGLT---VNNEYIACGSETNEV 537
+WDV+ + F GHT + + + N +I+ G++ + +
Sbjct: 181 AIWDVESGQLIQNFHGHTGDVFAIDVPKCDTGNTFISAGADKHSL 225
>POMBASE|SPAC144.13c [details] [associations]
symbol:srw1 "CDK inhibitor Srw1" species:4896
"Schizosaccharomyces pombe" [GO:0000750 "pheromone-dependent signal
transduction involved in conjugation with cellular fusion"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007092 "activation of
mitotic anaphase-promoting complex activity" evidence=TAS]
[GO:0008054 "cyclin catabolic process" evidence=IMP] [GO:0030996
"cell cycle arrest in response to nitrogen starvation"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC144.13c GO:GO:0005634
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0000750 GO:GO:0008054
GO:GO:0007092 GO:GO:0045736 GO:GO:0031137 HOGENOM:HOG000195514
KO:K03364 OrthoDB:EOG43FM5B GO:GO:0030996 EMBL:AB005589
EMBL:AB001285 PIR:T37680 RefSeq:NP_594674.1
ProteinModelPortal:O13286 STRING:O13286 EnsemblFungi:SPAC144.13c.1
GeneID:2542824 KEGG:spo:SPAC144.13c OMA:PMATANL NextBio:20803866
Uniprot:O13286
Length = 556
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/186 (24%), Positives = 82/186 (44%)
Query: 369 HYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVD 428
HY V R ++ L WN +NL+AS D + +WD + + + H ++
Sbjct: 365 HYFRVLTAHRQEVCGLEWNS-NENLLASGGNDNALMVWDKFEEKPLYSFHNHIAAVKAIT 423
Query: 429 FSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELAS 488
+S + +L SG G+AD I ++ + S LH + + + + NE S
Sbjct: 424 WSPHQRGILASGG-----GTADRTIKLWNTQRGSM-LHNIDTGSQVCNLLWSKQTNEFIS 477
Query: 489 AS--TDSSLRLWDVKENLPLHTFRGHTNEKNFVGLTVNNEYIACGS--ETNEVFVYHKAI 544
++ + LW+ + T +GHT+ ++ ++ N E I G+ ET + +
Sbjct: 478 THGFMENEVALWNYPSVSRVGTLKGHTDRVLYLAMSPNGENIVTGAADETLRFWKLFDSK 537
Query: 545 SKPAAS 550
SK +AS
Sbjct: 538 SKHSAS 543
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 44/160 (27%), Positives = 76/160 (47%)
Query: 354 KIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTKNLIASSDYDGIVTIWDVTTSQS 413
+++ +S + +E +H PT + S L W + +L A ++G V IWD T +
Sbjct: 271 RVYLWSGISSEVTVMHN---FYPTDTVTS-LRWVQRGTHL-AVGTHNGSVEIWDAATCKK 325
Query: 414 VMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADHHIHYYDLRNISQPLHVFNGHKK 473
H +R ++ ++ +L SG D+HI + D+R V H++
Sbjct: 326 TRTMSGHTERVGALSWN---DHVLSSGG-------RDNHILHRDVRAPEHYFRVLTAHRQ 375
Query: 474 AVSYVKFLSN-NELASASTDSSLRLWDVKENLPLHTFRGH 512
V +++ SN N LAS D++L +WD E PL++F H
Sbjct: 376 EVCGLEWNSNENLLASGGNDNALMVWDKFEEKPLYSFHNH 415
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 50/210 (23%), Positives = 95/210 (45%)
Query: 332 ISSIEFDRDDELFASAGVSRRIKIFEFSSVVNEPRDVHYPMVEMPTRSKLSCLSWNKYTK 391
+ S+ F RD + +A + +K++ E + Y + T + + C ++ +
Sbjct: 105 VRSVHFSRDGQRLVTASDDKSVKVWGV-----ERKKFLYSL-NRHT-NWVRCARFSPDGR 157
Query: 392 NLIASSDYDGIVTIWDVTTSQSVMEYEEHEKRAWSVDFSCTEPSMLVSGSDDCKVGSADH 451
LIAS D V +WD ++ Q + + ++ A VDF+ + + SG AD+
Sbjct: 158 -LIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSG--------ADN 208
Query: 452 HIHYYDLRNISQPLHVFNGHKKAVSYVKFL-SNNELASASTDSSLRLWDVKENLPLHTFR 510
I +D+R H + H V+ F S N L S S+DS++++ D+ E ++T
Sbjct: 209 TIKIWDIRTNKLIQH-YKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLH 267
Query: 511 GHTNEKNFVGLTVNNEYIACGSETNEVFVY 540
GH V + + + A G ++V ++
Sbjct: 268 GHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
WARNING: HSPs involving 284 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.132 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 597 574 0.00080 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 534
No. of states in DFA: 623 (66 KB)
Total size of DFA: 344 KB (2172 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 54.02u 0.09s 54.11t Elapsed: 00:00:06
Total cpu time: 54.11u 0.10s 54.21t Elapsed: 00:00:06
Start: Sat May 11 06:22:22 2013 End: Sat May 11 06:22:28 2013
WARNINGS ISSUED: 2