BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042887
(628 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 164 LEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFS 223
L+ +D+ N+L G F I+ + L+ ++IS+N G IP L+SL YLS++EN F+
Sbjct: 222 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFT 279
Query: 224 CKLPL----SIWNISSLEIISLH---------------------SNRFEGSLPLNIGFNI 258
++P + ++ L++ H SN F G LP++ +
Sbjct: 280 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 339
Query: 259 PNVNFLSVGQNNFTGSLPHSFSN-ASNLQVLDVYKNHFSGQVKIDXXXXXXXXXXXXXXX 317
+ L + N F+G LP S +N +++L LD+ N+FSG + +
Sbjct: 340 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 399
Query: 318 XXGXXXXXXXXXXXXXXNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGT 377
G NCS++ L+L+ N G S+ +LS K+ + + N + G
Sbjct: 400 NNG----FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLNMLEGE 454
Query: 378 IPSEIKNLVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRGTIPDXXXXXXXXX 437
IP E+ + + +++N LTG IP + NL ++L N L G IP
Sbjct: 455 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 514
Query: 438 XXXXXXXXXQGNVPSSLGNCQNLM 461
GN+P+ LG+C++L+
Sbjct: 515 ILKLSNNSFSGNIPAELGDCRSLI 538
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 192/524 (36%), Gaps = 105/524 (20%)
Query: 153 LGLIQRLNLLKLEMIDVGDNQLIGKFPDFIANF-SALEAIDISANMLGGRIP-------- 203
+G I L L L+ + + +N+ G+ PDF++ L +D+S N G +P
Sbjct: 257 VGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 316
Query: 204 -----------------DSLCQLRSLNYLSISENNFSCKLPLSIWNIS-SLEIISLHSNR 245
D+L ++R L L +S N FS +LP S+ N+S SL + L SN
Sbjct: 317 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNN 376
Query: 246 FEGSLPLNIGFNIPN-VNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDXX 304
F G + N+ N N + L + N FTG +P + SN S L L + N+ SG +
Sbjct: 377 FSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP---- 432
Query: 305 XXXXXXXXXXXXXXXGXXXXXXXXXXXXXXNCSQMEMLYLNTNKFGGVFLRSIANLSAKI 364
+ S++ L L N G + + +
Sbjct: 433 --------------------------SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 466
Query: 365 TVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRG 424
T+I + N ++G IPS + N N+N + N+LTG IP IG L+NL L L NS G
Sbjct: 467 TLI-LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 525
Query: 425 TIPDXXXXXXXXXXXXXXXXXXQGNVPSSL-GNCQNLMTXXXXXXXXXXXXXXXIPLEVG 483
IP G +P+++ + + E
Sbjct: 526 NIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECH 585
Query: 484 NLRNLAEFD--LSE--NHFSNEIPVTLSACT-------------TLEYLHLQGNSFSGSL 526
NL EF SE N S P +++ ++ +L + N SG +
Sbjct: 586 GAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYI 645
Query: 527 PLSLKTL------------------------KSIKELDLSRNNLSGQIPKXXXXXXXXXX 562
P + ++ + + LDLS N L G+IP+
Sbjct: 646 PKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTE 705
Query: 563 XXXXXXHFEGEVPRKGVFGNRTGIHLIGNERLCGGLEELHLPSC 606
+ G +P G F + N LCG LP C
Sbjct: 706 IDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG----YPLPRC 745
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 159/417 (38%), Gaps = 84/417 (20%)
Query: 162 LKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENN 221
+ LE +DV N P F+ + SAL+ +DIS N L G ++ L L+IS N
Sbjct: 197 VNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQ 255
Query: 222 FSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSN 281
F +P + SL+ +SL N+F G +P + + L + N+F G++P F +
Sbjct: 256 FVGPIP--PLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGS 313
Query: 282 ASNLQVLDVYKNHFSGQVKIDXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXNCSQMEM 341
S L+ L + N+FSG++ +D +++
Sbjct: 314 CSLLESLALSSNNFSGELPMDTLLKMRG-----------------------------LKV 344
Query: 342 LYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGT 401
L L+ N+F G S+ NLSA + + + N SG I
Sbjct: 345 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI----------------------- 381
Query: 402 IPHAIGELKN-LQGLALVRNSLRGTIPDXXXXXXXXXXXXXXXXXXQGNVPSSLGNCQNL 460
+P+ KN LQ L L N G IP +L NC L
Sbjct: 382 LPNLCQNPKNTLQELYLQNNGFTGKIP------------------------PTLSNCSEL 417
Query: 461 MTXXXXXXXXXXXXXXXIPLEVGNLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGN 520
++ IP +G+L L + L N EIP L TLE L L N
Sbjct: 418 VSLHLSFNYLSGT----IPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFN 473
Query: 521 SFSGSLPLSLKTLKSIKELDLSRNNLSGQIPKXXXXXXXXXXXXXXXXHFEGEVPRK 577
+G +P L ++ + LS N L+G+IPK F G +P +
Sbjct: 474 DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 530
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 176/448 (39%), Gaps = 80/448 (17%)
Query: 186 SALEAIDISANMLGGRIPD--SLCQLRSLNYLSISEN--NFSCKLPLSIWNISSLEIISL 241
++L ++D+S N L G + SL L +L++S N +F K+ + ++SLE++ L
Sbjct: 97 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDL 155
Query: 242 HSNRFEGSLPLNIGFNIPN----VNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSG 297
+N G+ +G+ + + + L++ N +G + S NL+ LDV N+FS
Sbjct: 156 SANSISGANV--VGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFST 211
Query: 298 QVKIDXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXNCSQMEMLYLNTNKFGGVFLRSI 357
+ +CS ++ L ++ NK G F R+I
Sbjct: 212 GIPF-------------------------------LGDCSALQHLDISGNKLSGDFSRAI 240
Query: 358 ANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGTIPHAI-GELKNLQGLA 416
+ + ++ ++ + NQ G IP L ++ + N+ TG IP + G L GL
Sbjct: 241 STCT-ELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLD 297
Query: 417 LVRNSLRGTIP-------------------------DXXXXXXXXXXXXXXXXXXQGNVP 451
L N G +P D G +P
Sbjct: 298 LSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELP 357
Query: 452 SSLGNCQNLMTXXXXXXXXXXXXXXXIPLEVGNLRN-LAEFDLSENHFSNEIPVTLSACT 510
SL N + +P N +N L E L N F+ +IP TLS C+
Sbjct: 358 ESLTNLS--ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS 415
Query: 511 TLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRNNLSGQIPKXXXXXXXXXXXXXXXXHF 570
L LHL N SG++P SL +L +++L L N L G+IP+
Sbjct: 416 ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 475
Query: 571 EGEVPRKGVFGNRTGIHLI--GNERLCG 596
GE+P N T ++ I N RL G
Sbjct: 476 TGEIPSG--LSNCTNLNWISLSNNRLTG 501
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 115/260 (44%), Gaps = 35/260 (13%)
Query: 150 AGNLGLIQRLNLLKLEMIDVGDNQLIGKFPDFIANFSA-LEAIDISANMLGGRIPDSLCQ 208
+G L + L + L+++D+ N+ G+ P+ + N SA L +D+S+N G I +LCQ
Sbjct: 328 SGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQ 387
Query: 209 --LRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSV 266
+L L + N F+ K+P ++ N S L + L N G++P ++G ++ + L +
Sbjct: 388 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG-SLSKLRDLKL 446
Query: 267 GQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDXXXXXXXXXXXXXXXXXGXXXXXX 326
N G +P L+ L + N +G++
Sbjct: 447 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP-------------------------- 480
Query: 327 XXXXXXXXNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLV 386
NC+ + + L+ N+ G + I L + ++ + +N SG IP+E+ +
Sbjct: 481 ----SGLSNCTNLNWISLSNNRLTGEIPKWIGRLE-NLAILKLSNNSFSGNIPAELGDCR 535
Query: 387 NINAFGVEYNQLTGTIPHAI 406
++ + N GTIP A+
Sbjct: 536 SLIWLDLNTNLFNGTIPAAM 555
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 164 LEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFS 223
L+ +D+ N+L G F I+ + L+ ++IS+N G IP L+SL YLS++EN F+
Sbjct: 225 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFT 282
Query: 224 CKLPL----SIWNISSLEIISLH---------------------SNRFEGSLPLNIGFNI 258
++P + ++ L++ H SN F G LP++ +
Sbjct: 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 342
Query: 259 PNVNFLSVGQNNFTGSLPHSFSN-ASNLQVLDVYKNHFSGQVKIDXXXXXXXXXXXXXXX 317
+ L + N F+G LP S +N +++L LD+ N+FSG + +
Sbjct: 343 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 402
Query: 318 XXGXXXXXXXXXXXXXXNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGT 377
G NCS++ L+L+ N G S+ +LS K+ + + N + G
Sbjct: 403 NNG----FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLNMLEGE 457
Query: 378 IPSEIKNLVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRGTIPDXXXXXXXXX 437
IP E+ + + +++N LTG IP + NL ++L N L G IP
Sbjct: 458 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 517
Query: 438 XXXXXXXXXQGNVPSSLGNCQNLM 461
GN+P+ LG+C++L+
Sbjct: 518 ILKLSNNSFSGNIPAELGDCRSLI 541
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 192/524 (36%), Gaps = 105/524 (20%)
Query: 153 LGLIQRLNLLKLEMIDVGDNQLIGKFPDFIANF-SALEAIDISANMLGGRIP-------- 203
+G I L L L+ + + +N+ G+ PDF++ L +D+S N G +P
Sbjct: 260 VGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319
Query: 204 -----------------DSLCQLRSLNYLSISENNFSCKLPLSIWNIS-SLEIISLHSNR 245
D+L ++R L L +S N FS +LP S+ N+S SL + L SN
Sbjct: 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNN 379
Query: 246 FEGSLPLNIGFNIPN-VNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDXX 304
F G + N+ N N + L + N FTG +P + SN S L L + N+ SG +
Sbjct: 380 FSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP---- 435
Query: 305 XXXXXXXXXXXXXXXGXXXXXXXXXXXXXXNCSQMEMLYLNTNKFGGVFLRSIANLSAKI 364
+ S++ L L N G + + +
Sbjct: 436 --------------------------SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 469
Query: 365 TVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRG 424
T+I + N ++G IPS + N N+N + N+LTG IP IG L+NL L L NS G
Sbjct: 470 TLI-LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 528
Query: 425 TIPDXXXXXXXXXXXXXXXXXXQGNVPSSL-GNCQNLMTXXXXXXXXXXXXXXXIPLEVG 483
IP G +P+++ + + E
Sbjct: 529 NIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECH 588
Query: 484 NLRNLAEFD--LSE--NHFSNEIPVTLSACT-------------TLEYLHLQGNSFSGSL 526
NL EF SE N S P +++ ++ +L + N SG +
Sbjct: 589 GAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYI 648
Query: 527 PLSLKTL------------------------KSIKELDLSRNNLSGQIPKXXXXXXXXXX 562
P + ++ + + LDLS N L G+IP+
Sbjct: 649 PKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTE 708
Query: 563 XXXXXXHFEGEVPRKGVFGNRTGIHLIGNERLCGGLEELHLPSC 606
+ G +P G F + N LCG LP C
Sbjct: 709 IDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG----YPLPRC 748
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 159/417 (38%), Gaps = 84/417 (20%)
Query: 162 LKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENN 221
+ LE +DV N P F+ + SAL+ +DIS N L G ++ L L+IS N
Sbjct: 200 VNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQ 258
Query: 222 FSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSN 281
F +P + SL+ +SL N+F G +P + + L + N+F G++P F +
Sbjct: 259 FVGPIP--PLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGS 316
Query: 282 ASNLQVLDVYKNHFSGQVKIDXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXNCSQMEM 341
S L+ L + N+FSG++ +D +++
Sbjct: 317 CSLLESLALSSNNFSGELPMDTLLKMRG-----------------------------LKV 347
Query: 342 LYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGT 401
L L+ N+F G S+ NLSA + + + N SG I
Sbjct: 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI----------------------- 384
Query: 402 IPHAIGELKN-LQGLALVRNSLRGTIPDXXXXXXXXXXXXXXXXXXQGNVPSSLGNCQNL 460
+P+ KN LQ L L N G IP +L NC L
Sbjct: 385 LPNLCQNPKNTLQELYLQNNGFTGKIP------------------------PTLSNCSEL 420
Query: 461 MTXXXXXXXXXXXXXXXIPLEVGNLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGN 520
++ IP +G+L L + L N EIP L TLE L L N
Sbjct: 421 VSLHLSFNYLSGT----IPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFN 476
Query: 521 SFSGSLPLSLKTLKSIKELDLSRNNLSGQIPKXXXXXXXXXXXXXXXXHFEGEVPRK 577
+G +P L ++ + LS N L+G+IPK F G +P +
Sbjct: 477 DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 533
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 176/448 (39%), Gaps = 80/448 (17%)
Query: 186 SALEAIDISANMLGGRIPD--SLCQLRSLNYLSISEN--NFSCKLPLSIWNISSLEIISL 241
++L ++D+S N L G + SL L +L++S N +F K+ + ++SLE++ L
Sbjct: 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDL 158
Query: 242 HSNRFEGSLPLNIGFNIPN----VNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSG 297
+N G+ +G+ + + + L++ N +G + S NL+ LDV N+FS
Sbjct: 159 SANSISGANV--VGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFST 214
Query: 298 QVKIDXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXNCSQMEMLYLNTNKFGGVFLRSI 357
+ +CS ++ L ++ NK G F R+I
Sbjct: 215 GIPF-------------------------------LGDCSALQHLDISGNKLSGDFSRAI 243
Query: 358 ANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGTIPHAI-GELKNLQGLA 416
+ + ++ ++ + NQ G IP L ++ + N+ TG IP + G L GL
Sbjct: 244 STCT-ELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLD 300
Query: 417 LVRNSLRGTIP-------------------------DXXXXXXXXXXXXXXXXXXQGNVP 451
L N G +P D G +P
Sbjct: 301 LSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELP 360
Query: 452 SSLGNCQNLMTXXXXXXXXXXXXXXXIPLEVGNLRN-LAEFDLSENHFSNEIPVTLSACT 510
SL N + +P N +N L E L N F+ +IP TLS C+
Sbjct: 361 ESLTNLS--ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS 418
Query: 511 TLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRNNLSGQIPKXXXXXXXXXXXXXXXXHF 570
L LHL N SG++P SL +L +++L L N L G+IP+
Sbjct: 419 ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 478
Query: 571 EGEVPRKGVFGNRTGIHLI--GNERLCG 596
GE+P N T ++ I N RL G
Sbjct: 479 TGEIPSG--LSNCTNLNWISLSNNRLTG 504
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 115/260 (44%), Gaps = 35/260 (13%)
Query: 150 AGNLGLIQRLNLLKLEMIDVGDNQLIGKFPDFIANFSA-LEAIDISANMLGGRIPDSLCQ 208
+G L + L + L+++D+ N+ G+ P+ + N SA L +D+S+N G I +LCQ
Sbjct: 331 SGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQ 390
Query: 209 --LRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSV 266
+L L + N F+ K+P ++ N S L + L N G++P ++G ++ + L +
Sbjct: 391 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLG-SLSKLRDLKL 449
Query: 267 GQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDXXXXXXXXXXXXXXXXXGXXXXXX 326
N G +P L+ L + N +G++
Sbjct: 450 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP-------------------------- 483
Query: 327 XXXXXXXXNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLV 386
NC+ + + L+ N+ G + I L + ++ + +N SG IP+E+ +
Sbjct: 484 ----SGLSNCTNLNWISLSNNRLTGEIPKWIGRLE-NLAILKLSNNSFSGNIPAELGDCR 538
Query: 387 NINAFGVEYNQLTGTIPHAI 406
++ + N GTIP A+
Sbjct: 539 SLIWLDLNTNLFNGTIPAAM 558
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 35/262 (13%)
Query: 160 NLLKLEMIDVGD-NQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSIS 218
NL L + +G N L+G P IA + L + I+ + G IPD L Q+++L L S
Sbjct: 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFS 133
Query: 219 ENNFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHS 278
N S LP SI ++ +L I+ NR G++P + G +++ +N TG +P +
Sbjct: 134 YNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT 193
Query: 279 FSNASNLQVLDVYKNHFSGQVKIDXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXNCSQ 338
F+N NL +D+ +N G + +
Sbjct: 194 FANL-NLAFVDLSRNMLEGDASV------------------------------LFGSDKN 222
Query: 339 MEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQL 398
+ ++L N F LS + + + +N+I GT+P + L +++ V +N L
Sbjct: 223 TQKIHLAKNSL--AFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL 280
Query: 399 TGTIPHAIGELKNLQGLALVRN 420
G IP G L+ A N
Sbjct: 281 CGEIPQG-GNLQRFDVSAYANN 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 85/220 (38%), Gaps = 27/220 (12%)
Query: 356 SIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGTIPHAIGELKNLQGL 415
S+ANL + G N + G IP I L ++ + + ++G IP + ++K L L
Sbjct: 71 SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130
Query: 416 ALVRNSLRGTIPDXXXXXXXXXXXXXXXXXXQGNVPSSLGNCQNLMTXXXXXXXXXXXXX 475
N+L GT+P G +P S G+ L T
Sbjct: 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGK- 189
Query: 476 XXIPLEVGNLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFS------------ 523
IP NL NLA DLS N + V + + +HL NS +
Sbjct: 190 --IPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNL 246
Query: 524 -----------GSLPLSLKTLKSIKELDLSRNNLSGQIPK 552
G+LP L LK + L++S NNL G+IP+
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 108/281 (38%), Gaps = 50/281 (17%)
Query: 337 SQMEMLYLNTNKFGGV--FLRSIANLSAKIT---VIGMGDNQISGTIP---SEIKNLVNI 388
S + YLN GG+ + I AK+T + + +SG IP S+IK LV +
Sbjct: 71 SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130
Query: 389 NAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRGTIPDXXXXXXXXXXXXXXXXXXQG 448
+ YN L+GT+P +I L NL G+ N + G IPD
Sbjct: 131 D---FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD-------------------- 167
Query: 449 NVPSSLGNCQNLMTXXXXXXXXXXXXXXXIPLEVGNLRNLAEFDLSENHFSNEIPVTLSA 508
S G+ L T IP NL NLA DLS N + V +
Sbjct: 168 ----SYGSFSKLFT---SMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGS 219
Query: 509 CTTLEYLHLQGNSFS---GSLPLSLKTLKSIKELDLSRNNLSGQIPKXXXXXXXXXXXXX 565
+ +HL NS + G + LS K++ LDL N + G +P+
Sbjct: 220 DKNTQKIHLAKNSLAFDLGKVGLS----KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNV 275
Query: 566 XXXHFEGEVPRKGVFGNRTGIHLIGNERLCGGLEELHLPSC 606
+ GE+P+ G N+ LCG LP+C
Sbjct: 276 SFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS----PLPAC 312
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 14/127 (11%)
Query: 18 RRKHTQKSSRTLPMEQ-------QFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLG 70
RRK Q +P E+ Q S +L A++NFS N++G+G FG VYKG+L
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 71 ETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIY 129
+ GT VAVK + ++ +G F TE E +S HRNL+++ C + + L+Y
Sbjct: 61 D-GTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMT-----PTERLLVY 114
Query: 130 EYMKCGS 136
YM GS
Sbjct: 115 PYMANGS 121
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 34 QFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSF 92
Q S +L A++NF N++G+G FG VYKG+L + G VAVK + ++ +G F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLAD-GXLVAVKRLKEERTQGGELQF 74
Query: 93 VTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
TE E +S HRNL+++ C + + L+Y YM GS
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMT-----PTERLLVYPYMANGS 113
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 25 SSRTLPMEQ-QFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL 83
SS +P E + P+V DL +ATNNF +IG G FG VYKG L + G VA+K
Sbjct: 18 SSYLVPFESYRVPLV---DLEEATNNFDHKFLIGHGVFGKVYKGVLRD-GAKVALKRRTP 73
Query: 84 KQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQ 143
+ + F TE E LS RH +L+ +I C + LIY+YM+ G+ + ++
Sbjct: 74 ESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-----RNEMILIYKYMENGNLKRHLYG 128
Query: 144 SNDKLEAGNLGLIQRLNL 161
S+ L ++ QRL +
Sbjct: 129 SD--LPTMSMSWEQRLEI 144
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 25 SSRTLPMEQ-QFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL 83
SS +P E + P+V DL +ATNNF +IG G FG VYKG L + G VA+K
Sbjct: 18 SSYLVPFESYRVPLV---DLEEATNNFDHKFLIGHGVFGKVYKGVLRD-GAKVALKRRTP 73
Query: 84 KQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQ 143
+ + F TE E LS RH +L+ +I C + LIY+YM+ G+ + ++
Sbjct: 74 ESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-----RNEMILIYKYMENGNLKRHLYG 128
Query: 144 SNDKLEAGNLGLIQRLNL 161
S+ L ++ QRL +
Sbjct: 129 SD--LPTMSMSWEQRLEI 144
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 17/115 (14%)
Query: 32 EQQFPMVSYADLSKATNNFS------ASNMIGQGSFGFVYKGKLGETGTTVAVK----VM 81
+ +F S+ +L TNNF N +G+G FG VYKG + TTVAVK ++
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMV 66
Query: 82 NLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
++ + + F E + ++ +H NL++++ S G D L+Y YM GS
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD----GDDL-CLVYVYMPNGS 116
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 17/115 (14%)
Query: 32 EQQFPMVSYADLSKATNNFS------ASNMIGQGSFGFVYKGKLGETGTTVAVK----VM 81
+ +F S+ +L TNNF N +G+G FG VYKG + TTVAVK ++
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMV 66
Query: 82 NLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
++ + + F E + ++ +H NL++++ S G D L+Y YM GS
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD----GDDL-CLVYVYMPNGS 116
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 17/115 (14%)
Query: 32 EQQFPMVSYADLSKATNNFS------ASNMIGQGSFGFVYKGKLGETGTTVAVK----VM 81
+ +F S+ +L TNNF N +G+G FG VYKG + TTVAVK ++
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMV 60
Query: 82 NLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
++ + + F E + ++ +H NL++++ S G D L+Y YM GS
Sbjct: 61 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD----GDDL-CLVYVYMPNGS 110
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 95/229 (41%), Gaps = 30/229 (13%)
Query: 36 PMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTE 95
P +Y + + + +G G +G VY+G + TVAVK + + + F+ E
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 60
Query: 96 CEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE------ 149
+ ++H NL++++ VC+ + F +I E+M G+ D++ + N +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQEVNAVVLL 115
Query: 150 ------AGNLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLG 199
+ + +++ N + ++ VG+N L+ K DF S L D G
Sbjct: 116 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTXTAHAG 172
Query: 200 GRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
+ P SL Y N FS K + + + EI + + + G
Sbjct: 173 AKFPIKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNL 107
+ + + +G G FG VY+G + TVAVK + + + F+ E + ++H NL
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 108 IKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAG------------NLGL 155
++++ VC+ + F +I E+M G+ D++ + N + + +
Sbjct: 70 VQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 156 IQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRS 211
+++ N + ++ VG+N L+ K DF S L D G + P S
Sbjct: 125 LEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTXTAHAGAKFPIKWTAPES 181
Query: 212 LNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNI 254
L Y N FS K + + + EI + + + G P +
Sbjct: 182 LAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 100/233 (42%), Gaps = 39/233 (16%)
Query: 26 SRTLPMEQQFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTT----VAVKVM 81
S T P + Q ++ +L + ++G G+FG VYKG G T VA+K++
Sbjct: 23 SGTAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKIL 75
Query: 82 NLKQKGAAK-SFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDW 140
N A F+ E ++++ H +L++++ VC S + L+ + M G ++
Sbjct: 76 NETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEY 129
Query: 141 MHQSND------------KLEAGNLGLIQRLNLLKLEMIDVGDNQLIGKFPDF--IANF- 185
+H+ D ++ G + L +R +L D+ ++ K P+ I +F
Sbjct: 130 VHEHKDNIGSQLLLNWCVQIAKGMMYLEER----RLVHRDLAARNVLVKSPNHVKITDFG 185
Query: 186 --SALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSL 236
LE + N GG++P L ++Y + + ++IW + +
Sbjct: 186 LARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTF 238
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 95/229 (41%), Gaps = 30/229 (13%)
Query: 36 PMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTE 95
P +Y + + + +G G +G VY+G + TVAVK + + + F+ E
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 63
Query: 96 CEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE------ 149
+ ++H NL++++ VC+ + F +I E+M G+ D++ + N +
Sbjct: 64 AAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVNAVVLL 118
Query: 150 ------AGNLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLG 199
+ + +++ N + ++ VG+N L+ K DF S L D G
Sbjct: 119 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAG 175
Query: 200 GRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
+ P SL Y N FS K + + + EI + + + G
Sbjct: 176 AKFPIKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 219
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 54 NMIGQGSFGFVYKGKLG-ETGTT--VAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLI 108
++G+G FG V +G L E GT+ VAVK M L + + F++E + + H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 109 KIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAG 151
+++ VC + +G+ +I +MK G ++ S +LE G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYS--RLETG 140
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNL 107
+ + + +G G +G VY+G + TVAVK + + + F+ E + ++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 108 IKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAG------------NLGL 155
++++ VC+ + F +I E+M G+ D++ + N + + +
Sbjct: 70 VQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 156 IQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRS 211
+++ N + ++ VG+N L+ K DF S L D G + P S
Sbjct: 125 LEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTXTAHAGAKFPIKWTAPES 181
Query: 212 LNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNI 254
L Y N FS K + + + EI + + + G P +
Sbjct: 182 LAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI EY+ GS D++ + ++++
Sbjct: 82 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERID 116
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI EY+ GS D++ + ++++
Sbjct: 96 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERID 130
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI EY+ GS D++ + ++++
Sbjct: 77 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERID 111
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI EY+ GS D++ + ++++
Sbjct: 96 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERID 130
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI EY+ GS D++ + ++++
Sbjct: 78 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERID 112
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI EY+ GS D++ + ++++
Sbjct: 78 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERID 112
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI EY+ GS D++ + ++++
Sbjct: 109 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERID 143
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI EY+ GS D++ + ++++
Sbjct: 76 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERID 110
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI EY+ GS D++ + ++++
Sbjct: 83 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERID 117
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI EY+ GS D++ + ++++
Sbjct: 78 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERID 112
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI EY+ GS D++ + ++++
Sbjct: 84 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERID 118
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI EY+ GS D++ + ++++
Sbjct: 79 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERID 113
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI EY+ GS D++ + ++++
Sbjct: 81 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERID 115
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI EY+ GS D++ + ++++
Sbjct: 85 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQKHKERID 119
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 30/225 (13%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAG-------- 151
++H NL++++ VC+ + F +I E+M G+ D++ + N + +
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 152 ----NLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 175
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SL Y N FS K + + + EI + + + G
Sbjct: 176 IKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 99/231 (42%), Gaps = 39/231 (16%)
Query: 28 TLPMEQQFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTT----VAVKVMNL 83
T P + Q ++ +L + ++G G+FG VYKG G T VA+K++N
Sbjct: 2 TAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNE 54
Query: 84 KQKGAAK-SFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMH 142
A F+ E ++++ H +L++++ VC S + L+ + M G +++H
Sbjct: 55 TTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVH 108
Query: 143 QSND------------KLEAGNLGLIQRLNLLKLEMIDVGDNQLIGKFPDF--IANF--- 185
+ D ++ G + L +R +L D+ ++ K P+ I +F
Sbjct: 109 EHKDNIGSQLLLNWCVQIAKGMMYLEER----RLVHRDLAARNVLVKSPNHVKITDFGLA 164
Query: 186 SALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSL 236
LE + N GG++P L ++Y + + ++IW + +
Sbjct: 165 RLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTF 215
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 30/225 (13%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAG-------- 151
++H NL++++ VC+ + F +I E+M G+ D++ + N + +
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 152 ----NLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 175
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SL Y N FS K + + + EI + + + G
Sbjct: 176 IKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 30/225 (13%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 68
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE---------- 149
++H NL++++ VC+ + F +I E+M G+ D++ + N +
Sbjct: 69 KEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 150 --AGNLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ + +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 180
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SL Y N FS K + + + EI + + + G
Sbjct: 181 IKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 30/225 (13%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 68
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE---------- 149
++H NL++++ VC+ + F +I E+M G+ D++ + N +
Sbjct: 69 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 150 --AGNLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ + +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTXTAHAGAKFP 180
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SL Y N FS K + + + EI + + + G
Sbjct: 181 IKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 30/225 (13%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAG-------- 151
++H NL++++ VC+ + F +I E+M G+ D++ + N + +
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 152 ----NLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 175
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SL Y N FS K + + + EI + + + G
Sbjct: 176 IKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 30/225 (13%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAG-------- 151
++H NL++++ VC+ + F +I E+M G+ D++ + N + +
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 152 ----NLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 175
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SL Y N FS K + + + EI + + + G
Sbjct: 176 IKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 30/225 (13%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 68
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAG-------- 151
++H NL++++ VC+ + F +I E+M G+ D++ + N + +
Sbjct: 69 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 123
Query: 152 ----NLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 180
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SL Y N FS K + + + EI + + + G
Sbjct: 181 IKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 88/212 (41%), Gaps = 25/212 (11%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE---------- 149
++H NL++++ VC+ + F +I E+M G+ D++ + N +
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 150 --AGNLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ + +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 175
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISS 235
SL Y S + + +W I++
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 30/225 (13%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 68
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE---------- 149
++H NL++++ VC+ + F +I E+M G+ D++ + N +
Sbjct: 69 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 150 --AGNLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ + +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 180
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SL Y N FS K + + + EI + + + G
Sbjct: 181 IKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 88/212 (41%), Gaps = 25/212 (11%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE---------- 149
++H NL++++ VC+ + F +I E+M G+ D++ + N +
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 150 --AGNLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ + +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 175
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISS 235
SL Y S + + +W I++
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNL 107
+ + + +G G +G VY+G + TVAVK + + + F+ E + ++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 108 IKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAG------------NLGL 155
++++ VC+ + F +I E+M G+ D++ + N + + +
Sbjct: 70 VQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 156 IQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRS 211
+++ N + ++ VG+N L+ K DF S L D G + P S
Sbjct: 125 LEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTFTAHAGAKFPIKWTAPES 181
Query: 212 LNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNI 254
L Y N FS K + + + EI + + + G P +
Sbjct: 182 LAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 88/212 (41%), Gaps = 25/212 (11%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 65
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE---------- 149
++H NL++++ VC+ + F +I E+M G+ D++ + N +
Sbjct: 66 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 150 --AGNLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ + +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 177
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISS 235
SL Y S + + +W I++
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 30/225 (13%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 68
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE---------- 149
++H NL++++ VC+ + F +I E+M G+ D++ + N +
Sbjct: 69 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 150 --AGNLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ + +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 180
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SL Y N FS K + + + EI + + + G
Sbjct: 181 IKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 88/212 (41%), Gaps = 25/212 (11%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 76
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE---------- 149
++H NL++++ VC+ + F +I E+M G+ D++ + N +
Sbjct: 77 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 131
Query: 150 --AGNLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ + +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 132 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 188
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISS 235
SL Y S + + +W I++
Sbjct: 189 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 30/225 (13%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 270
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAG-------- 151
++H NL++++ VC+ + F +I E+M G+ D++ + N + +
Sbjct: 271 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 325
Query: 152 ----NLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ +++ N + + VG+N L+ K DF S L D G + P
Sbjct: 326 QISSAMEYLEKKNFIHRNLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 382
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SL Y N FS K + + + EI + + + G
Sbjct: 383 IKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 422
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 30/225 (13%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 309
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE---------- 149
++H NL++++ VC+ + F +I E+M G+ D++ + N +
Sbjct: 310 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 364
Query: 150 --AGNLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ + +++ N + + VG+N L+ K DF S L D G + P
Sbjct: 365 QISSAMEYLEKKNFIHRNLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 421
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SL Y N FS K + + + EI + + + G
Sbjct: 422 IKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 461
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 30/225 (13%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 65
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE---------- 149
++H NL++++ VC+ + F +I E+M G+ D++ + N +
Sbjct: 66 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 150 --AGNLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ + +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 177
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SL Y N FS K + + + EI + + + G
Sbjct: 178 IKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 30/225 (13%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 64
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE---------- 149
++H NL++++ VC+ + F +I E+M G+ D++ + N +
Sbjct: 65 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 150 --AGNLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ + +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAPAGAKFP 176
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SL Y N FS K + + + EI + + + G
Sbjct: 177 IKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 30/225 (13%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 65
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE---------- 149
++H NL++++ VC+ + F +I E+M G+ D++ + N +
Sbjct: 66 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 150 --AGNLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ + +++ N + ++ VG+N L+ K DF S L D G + P
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAPAGAKFP 177
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SL Y N FS K + + + EI + + + G
Sbjct: 178 IKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 30/225 (13%)
Query: 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEAL 99
Y + + + +G G +G VY+G + TVAVK + + + F+ E +
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 267
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE---------- 149
++H NL++++ VC+ + F +I E+M G+ D++ + N +
Sbjct: 268 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 322
Query: 150 --AGNLGLIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIP 203
+ + +++ N + + VG+N L+ K DF S L D G + P
Sbjct: 323 QISSAMEYLEKKNFIHRNLAARNCLVGENHLV-KVADF--GLSRLMTGDTYTAHAGAKFP 379
Query: 204 DSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SL Y N FS K + + + EI + + + G
Sbjct: 380 IKWTAPESLAY-----NKFSIKSDVWAFGVLLWEIATYGMSPYPG 419
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G G+FG VYK K ETG A KV+ K + + ++ E E L+ H ++K++
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 82
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G G+FG VYK K ETG A KV+ K + + ++ E E L+ H ++K++
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 74
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI EY+ GS D++ ++++
Sbjct: 81 GVCYSAGRRNL---KLIMEYLPYGSLRDYLQAHAERID 115
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 88/205 (42%), Gaps = 27/205 (13%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNL 107
+ + + +G G +G VY G + TVAVK + + + F+ E + ++H NL
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNL 90
Query: 108 IKIITVCS-SIDFKGVDFKALIYEYMKCGSSEDWMHQSN-DKLEA-----------GNLG 154
++++ VC+ F ++ EYM G+ D++ + N +++ A +
Sbjct: 91 VQLLGVCTLEPPF------YIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAME 144
Query: 155 LIQRLNLLKLEMID----VGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLR 210
+++ N + ++ VG+N ++ K DF S L D G + P
Sbjct: 145 YLEKKNFIHRDLAARNCLVGENHVV-KVADF--GLSRLMTGDTYTAHAGAKFPIKWTAPE 201
Query: 211 SLNYLSISENNFSCKLPLSIWNISS 235
SL Y + S + + +W I++
Sbjct: 202 SLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 34 QFPMVSYADLSKATNNFS------ASNMIGQGSFGFVYKGKLGETGTTVAVK----VMNL 83
+F S+ +L TNNF N G+G FG VYKG + TTVAVK ++++
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV--NNTTVAVKKLAAMVDI 59
Query: 84 KQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
+ + F E + + +H NL++++ S G D L+Y Y GS
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSD----GDDL-CLVYVYXPNGS 107
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
NF IG+G++G VYK + TG VA+K + L + +G + + E L + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 106 NLIKIITVCSS 116
N++K++ V +
Sbjct: 67 NIVKLLDVIHT 77
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 61 HPNIVKLLDVIHT 73
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 64 HPNIVKLLDVIHT 76
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
NF IG+G++G VYK + TG VA+K + L + +G + + E L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 106 NLIKIITVCSS 116
N++K++ V +
Sbjct: 63 NIVKLLDVIHT 73
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
NF IG+G++G VYK + TG VA+K + L + +G + + E L + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 106 NLIKIITVCSS 116
N++K++ V +
Sbjct: 70 NIVKLLDVIHT 80
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 61 HPNIVKLLDVIHT 73
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 104 HRNLIKIITVCSS-------IDFKGVDFKALI 128
H N++K++ V + +F +D K +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFM 95
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 61 HPNIVKLLDVIHT 73
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 64 HPNIVKLLDVIHT 76
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 63 HPNIVKLLDVIHT 75
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
NF IG+G++G VYK + TG VA+K + L + +G + + E L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 106 NLIKIITVCSS 116
N++K++ V +
Sbjct: 63 NIVKLLDVIHT 73
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 64 HPNIVKLLDVIHT 76
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
NF IG+G++G VYK + TG VA+K + L + +G + + E L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 106 NLIKIITVCSS 116
N++K++ V +
Sbjct: 63 NIVKLLDVIHT 73
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
NF IG+G++G VYK + TG VA+K + L + +G + + E L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 106 NLIKIITVCSS 116
N++K++ V +
Sbjct: 62 NIVKLLDVIHT 72
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
NF IG+G++G VYK + TG VA+K + L + +G + + E L + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 106 NLIKIITVCSS 116
N++K++ V +
Sbjct: 70 NIVKLLDVIHT 80
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
NF IG+G++G VYK + TG VA+K + L + +G + + E L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 106 NLIKIITVCSS 116
N++K++ V +
Sbjct: 62 NIVKLLDVIHT 72
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 61 HPNIVKLLDVIHT 73
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 64 HPNIVKLLDVIHT 76
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
NF IG+G++G VYK + TG VA+K + L + +G + + E L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 106 NLIKIITVCSS 116
N++K++ V +
Sbjct: 62 NIVKLLDVIHT 72
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 65 HPNIVKLLDVIHT 77
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 104 HRNLIKIITVCSS-------IDFKGVDFKALI 128
H N++K++ V + +F +D K +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFM 93
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
NF IG+G++G VYK + TG VA+K + L + +G + + E L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 106 NLIKIITVCSS 116
N++K++ V +
Sbjct: 62 NIVKLLDVIHT 72
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 63 HPNIVKLLDVIHT 75
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 64 HPNIVKLLDVIHT 76
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
NF IG+G++G VYK + TG VA+K + L + +G + + E L + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 106 NLIKIITVCSS 116
N++K++ V +
Sbjct: 64 NIVKLLDVIHT 74
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 62 HPNIVKLLDVIHT 74
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 63 HPNIVKLLDVIHT 75
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 63 HPNIVKLLDVIHT 75
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
NF IG+G++G VYK + TG VA+K + L + +G + + E L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 106 NLIKIITVCSS 116
N++K++ V +
Sbjct: 63 NIVKLLDVIHT 73
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 62 HPNIVKLLDVIHT 74
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
NF IG+G++G VYK + TG VA+K + L + +G + + E L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 106 NLIKIITVCSS 116
N++K++ V +
Sbjct: 62 NIVKLLDVIHT 72
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 61 HPNIVKLLDVIHT 73
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR 103
+ NF IG+G++G VYK + TG VA+K + L + +G + + E L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 104 HRNLIKIITVCSS 116
H N++K++ V +
Sbjct: 62 HPNIVKLLDVIHT 74
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVK--VMNLKQKGAAKSFVTECEALSNVRHRNLIKIITV 113
IGQG+FG V+K + +TG VA+K +M +++G + + E + L ++H N++ +I +
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 114 CSS 116
C +
Sbjct: 85 CRT 87
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVK--VMNLKQKGAAKSFVTECEALSNVRHRNLIKIITV 113
IGQG+FG V+K + +TG VA+K +M +++G + + E + L ++H N++ +I +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 114 CSS 116
C +
Sbjct: 86 CRT 88
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVK--VMNLKQKGAAKSFVTECEALSNVRHRNLIKIITV 113
IGQG+FG V+K + +TG VA+K +M +++G + + E + L ++H N++ +I +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 114 CSS 116
C +
Sbjct: 86 CRT 88
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G G+FG VYK + ET A KV++ K + + ++ E + L++ H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G G+FG VYK + ET A KV++ K + + ++ E + L++ H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVK--VMNLKQKGAAKSFVTECEALSNVRHRNLIKIITV 113
IGQG+FG V+K + +TG VA+K +M +++G + + E + L ++H N++ +I +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 114 CSS 116
C +
Sbjct: 86 CRT 88
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G G+FG VYK + ET A KV++ K + + ++ E + L++ H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
+G+G+FG V Y TG VAVK + + + F E E L +++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149
VC S + + LI E++ GS +++ + ++++
Sbjct: 81 GVCYSAGRRNL---KLIMEFLPYGSLREYLQKHKERID 115
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 56 IGQGSFGFVYKGKL-GETGTTVAVKVMNLK-----QKGAAKSFVTECEALSNVRHRNLIK 109
+G GSFG V +G+ +G TV+V V LK Q A F+ E A+ ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 110 IITVCSSIDFKGV 122
+ V + K V
Sbjct: 76 LYGVVLTPPMKMV 88
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 56 IGQGSFGFVYKGKL-GETGTTVAVKVMNLK-----QKGAAKSFVTECEALSNVRHRNLIK 109
+G GSFG V +G+ +G TV+V V LK Q A F+ E A+ ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 110 IITVCSSIDFKGV 122
+ V + K V
Sbjct: 76 LYGVVLTPPMKMV 88
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 56 IGQGSFGFVYKGKL-GETGTTVAVKVMNLK-----QKGAAKSFVTECEALSNVRHRNLIK 109
+G GSFG V +G+ +G TV+V V LK Q A F+ E A+ ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 110 IITVCSSIDFKGV 122
+ V + K V
Sbjct: 76 LYGVVLTPPMKMV 88
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 56 IGQGSFGFVYKGKL-GETGTTVAVKVMNLK-----QKGAAKSFVTECEALSNVRHRNLIK 109
+G GSFG V +G+ +G TV+V V LK Q A F+ E A+ ++ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 110 IITVCSSIDFKGV 122
+ V + K V
Sbjct: 86 LYGVVLTPPMKMV 98
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 56 IGQGSFGFVYKGKL-GETGTTVAVKVMNLK-----QKGAAKSFVTECEALSNVRHRNLIK 109
+G GSFG V +G+ +G TV+V V LK Q A F+ E A+ ++ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 110 IITVCSSIDFKGV 122
+ V + K V
Sbjct: 86 LYGVVLTPPMKMV 98
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 56 IGQGSFGFVYKGKL-GETGTTVAVKVMNLK-----QKGAAKSFVTECEALSNVRHRNLIK 109
+G GSFG V +G+ +G TV+V V LK Q A F+ E A+ ++ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 110 IITVCSSIDFKGV 122
+ V + K V
Sbjct: 80 LYGVVLTPPMKMV 92
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 56 IGQGSFGFVYKGKL-GETGTTVAVKVMNLK-----QKGAAKSFVTECEALSNVRHRNLIK 109
+G GSFG V +G+ +G TV+V V LK Q A F+ E A+ ++ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 110 IITVCSSIDFKGV 122
+ V + K V
Sbjct: 80 LYGVVLTPPMKMV 92
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 28 TLPMEQQFP---MVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL- 83
TL + Q P VS A + + + + +G+G++G VYK T TVA+K + L
Sbjct: 11 TLEAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLE 70
Query: 84 -KQKGAAKSFVTECEALSNVRHRNLIKIITV 113
+++G + + E L ++HRN+I++ +V
Sbjct: 71 HEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 44 SKATNN--FSASNMIGQGSFGFVYKGKLGETGTTVAVKVM-NLKQKGAAKSFVTECEALS 100
S++T+N + S+++GQG+ V++G+ +TG A+KV N+ + E E L
Sbjct: 3 SQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLK 62
Query: 101 NVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
+ H+N++K+ + + K LI E+ CGS
Sbjct: 63 KLNHKNIVKLFAIEEETTTR---HKVLIMEFCPCGS 95
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 40 YADLSKATNNFSASNMIGQ-GSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEA 98
Y +++ N +IG+ G FG VYK + ET A KV++ K + + ++ E +
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 99 LSNVRHRNLIKII 111
L++ H N++K++
Sbjct: 61 LASCDHPNIVKLL 73
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCS 115
IG+G FG V G G VAVK +K A++F+ E ++ +RH NL++++ V
Sbjct: 20 IGKGEFGDVMLGDY--RGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 74
Query: 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGN 152
++ KG + ++ EYM GS D++ + G+
Sbjct: 75 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGD 108
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 44 SKATNN--FSASNMIGQGSFGFVYKGKLGETGTTVAVKVM-NLKQKGAAKSFVTECEALS 100
S++T+N + S+++GQG+ V++G+ +TG A+KV N+ + E E L
Sbjct: 3 SQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLK 62
Query: 101 NVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
+ H+N++K+ + + K LI E+ CGS
Sbjct: 63 KLNHKNIVKLFAIEEETTTR---HKVLIMEFCPCGS 95
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 56 IGQGSFGFVYKGKLGETGTT-----VAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKI 110
+G+G+FG V+ + T VAVK + A K F E E L+N++H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 111 ITVCSSIDFKGVDFKALIYEYMKCGS 136
VC D +++EYMK G
Sbjct: 83 YGVCGD-----GDPLIMVFEYMKHGD 103
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Query: 48 NNFSASNMIGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAKSFVTECEALSNV 102
+N +G+G+FG V+ + + VAVK + A K F E E L+N+
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
+H +++K VC D +++EYMK G
Sbjct: 73 QHEHIVKFYGVCVE-----GDPLIMVFEYMKHGD 101
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCS 115
IG+G FG V G G VAVK +K A++F+ E ++ +RH NL++++ V
Sbjct: 29 IGKGEFGDVMLGDY--RGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 83
Query: 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGN 152
++ KG + ++ EYM GS D++ + G+
Sbjct: 84 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGD 117
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCS 115
IG+G FG V G G VAVK +K A++F+ E ++ +RH NL++++ V
Sbjct: 14 IGKGEFGDVMLGDY--RGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 68
Query: 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGN 152
++ KG + ++ EYM GS D++ + G+
Sbjct: 69 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGD 102
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
NF IG+G++G VYK + TG VA+ + L + +G + + E L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 106 NLIKIITVCSS 116
N++K++ V +
Sbjct: 63 NIVKLLDVIHT 73
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
NF IG+G++G VYK + TG VA+ + L + +G + + E L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 106 NLIKIITVCSS 116
N++K++ V +
Sbjct: 62 NIVKLLDVIHT 72
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCS 115
IG+G FG V G G VAVK +K A++F+ E ++ +RH NL++++ V
Sbjct: 201 IGKGEFGDVMLGDY--RGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 255
Query: 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGN 152
++ KG + ++ EYM GS D++ + G+
Sbjct: 256 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGD 289
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 19/135 (14%)
Query: 34 QFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA---- 89
+FP L A N IG+G FG V+KG+L + + VA+K + L
Sbjct: 7 EFPKSRLPTL--ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 90 ---KSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSND 146
+ F E +SN+ H N++K+ + + ++ E++ CG D H+ D
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCG---DLYHRLLD 114
Query: 147 KLEAGNLGLIQRLNL 161
K + RL L
Sbjct: 115 KAHPIKWSVKLRLML 129
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 19/135 (14%)
Query: 34 QFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA---- 89
+FP L A N IG+G FG V+KG+L + + VA+K + L
Sbjct: 7 EFPKSRLPTL--ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 90 ---KSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSND 146
+ F E +SN+ H N++K+ + + ++ E++ CG D H+ D
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCG---DLYHRLLD 114
Query: 147 KLEAGNLGLIQRLNL 161
K + RL L
Sbjct: 115 KAHPIKWSVKLRLML 129
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 19/135 (14%)
Query: 34 QFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA---- 89
+FP L A N IG+G FG V+KG+L + + VA+K + L
Sbjct: 7 EFPKSRLPTL--ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 90 ---KSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSND 146
+ F E +SN+ H N++K+ + + ++ E++ CG D H+ D
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCG---DLYHRLLD 114
Query: 147 KLEAGNLGLIQRLNL 161
K + RL L
Sbjct: 115 KAHPIKWSVKLRLML 129
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVK--VMNLKQKGAAKSFVTECEALSNV 102
++ + ++G+GS+G V K + +TG VA+K + + K K + E + L +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 103 RHRNLIKIITVCSS 116
RH NL+ ++ VC
Sbjct: 82 RHENLVNLLEVCKK 95
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNL 107
++G+G+FG V K K VA+K ++ + K+F+ E LS V H N+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIK--QIESESERKAFIVELRQLSRVNHPNI 64
Query: 108 IKIITVCSSIDFKGVDFKALIYEYMKCGS 136
+K+ C ++ L+ EY + GS
Sbjct: 65 VKLYGAC-------LNPVCLVMEYAEGGS 86
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 56 IGQGSFGFVYKGKLGETG-------TTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+GQG+F ++KG E G T V +KV++ + ++SF +S + H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 109 KIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSND 146
VC F G D L+ E++K GS + ++ ++ +
Sbjct: 76 LNYGVC----FCG-DENILVQEFVKFGSLDTYLKKNKN 108
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNL 107
++G+G+FG V K K VA+K ++ + K+F+ E LS V H N+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIK--QIESESERKAFIVELRQLSRVNHPNI 63
Query: 108 IKIITVCSSIDFKGVDFKALIYEYMKCGS 136
+K+ C ++ L+ EY + GS
Sbjct: 64 VKLYGAC-------LNPVCLVMEYAEGGS 85
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 162 LKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSL-CQLRSLNYLSISEN 220
+ L+ +D+ N +I +F+ LE +D + L S+ LR+L YL IS
Sbjct: 397 ISLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT 455
Query: 221 NFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFS 280
+ +SSLE++ + N F+ + +I + N+ FL + Q P +F+
Sbjct: 456 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 515
Query: 281 NASNLQVLDVYKNHF 295
+ S+LQVL++ N+F
Sbjct: 516 SLSSLQVLNMSHNNF 530
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 478 IPLEVGNLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIK 537
+P LRNL DLS+ P ++ ++L+ L++ N+F K L S++
Sbjct: 486 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 545
Query: 538 ELDLSRNNL 546
LD S N++
Sbjct: 546 VLDYSLNHI 554
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 484 NLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGS-LPLSLKTLKSIKELDLS 542
+LRNL D+S H + ++LE L + GNSF + LP L+++ LDLS
Sbjct: 443 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 502
Query: 543 RNNLSGQIP 551
+ L P
Sbjct: 503 QCQLEQLSP 511
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKS-FVTECEALSNVRHRNLIKIIT 112
IG+G+FG V+ G+L T VAVK K+ F+ E L H N++++I
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 113 VCSS 116
VC+
Sbjct: 180 VCTQ 183
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 164 LEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSL-CQLRSLNYLSISENNF 222
L+ +D+ N +I +F+ LE +D + L S+ LR+L YL IS +
Sbjct: 80 LKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 138
Query: 223 SCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNA 282
+SSLE++ + N F+ + +I + N+ FL + Q P +F++
Sbjct: 139 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL 198
Query: 283 SNLQVLDVYKNHF 295
S+LQVL++ N+F
Sbjct: 199 SSLQVLNMSHNNF 211
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 478 IPLEVGNLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIK 537
+P LRNL DLS+ P ++ ++L+ L++ N+F K L S++
Sbjct: 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 226
Query: 538 ELDLSRNNL 546
LD S N++
Sbjct: 227 VLDYSLNHI 235
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 484 NLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGS-LPLSLKTLKSIKELDLS 542
+LRNL D+S H + ++LE L + GNSF + LP L+++ LDLS
Sbjct: 124 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 183
Query: 543 RNNLSGQIP 551
+ L P
Sbjct: 184 QCQLEQLSP 192
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKS-FVTECEALSNVRHRNLIKIIT 112
IG+G+FG V+ G+L T VAVK K+ F+ E L H N++++I
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 113 VCSS 116
VC+
Sbjct: 180 VCTQ 183
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 164 LEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSL-CQLRSLNYLSISENNF 222
L+ +D+ N +I +F+ LE +D + L S+ LR+L YL IS +
Sbjct: 375 LKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 433
Query: 223 SCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNA 282
+SSLE++ + N F+ + +I + N+ FL + Q P +F++
Sbjct: 434 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL 493
Query: 283 SNLQVLDVYKNHF 295
S+LQVL++ N+F
Sbjct: 494 SSLQVLNMSHNNF 506
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 478 IPLEVGNLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIK 537
+P LRNL DLS+ P ++ ++L+ L++ N+F K L S++
Sbjct: 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 521
Query: 538 ELDLSRNNL 546
LD S N++
Sbjct: 522 VLDYSLNHI 530
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 484 NLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGS-LPLSLKTLKSIKELDLS 542
+LRNL D+S H + ++LE L + GNSF + LP L+++ LDLS
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478
Query: 543 RNNLSGQIP 551
+ L P
Sbjct: 479 QCQLEQLSP 487
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 25 SSRTLPMEQQFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKL-GETGTTVAVKVMNL 83
S+R+ P + + + +IG+G FG VY G+ GE VA++++++
Sbjct: 10 SARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE----VAIRLIDI 65
Query: 84 KQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSS 116
++ + K+F E A RH N++ + C S
Sbjct: 66 ERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 31 MEQQFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAK 90
+E+ +VS D K F IGQG+ G VY TG VA++ MNL+Q+ +
Sbjct: 7 LEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 63
Query: 91 SFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEA 150
+ E + ++ N++ + + D ++ EY+ GS D + ++ ++
Sbjct: 64 LIINEILVMRENKNPNIVNYLD-----SYLVGDELWVVMEYLAGGSLTDVVTETC--MDE 116
Query: 151 GNLGLIQRLNLLKLEMIDVGDNQLIGK 177
G + + R L LE + NQ+I +
Sbjct: 117 GQIAAVCRECLQALEFLH--SNQVIHR 141
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 31 MEQQFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAK 90
+E+ +VS D K F IGQG+ G VY TG VA++ MNL+Q+ +
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 91 SFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEA 150
+ E + ++ N++ + + D ++ EY+ GS D + ++ ++
Sbjct: 63 LIINEILVMRENKNPNIVNYLD-----SYLVGDELWVVMEYLAGGSLTDVVTETC--MDE 115
Query: 151 GNLGLIQRLNLLKLEMIDVGDNQLIGK 177
G + + R L LE + NQ+I +
Sbjct: 116 GQIAAVCRECLQALEFLH--SNQVIHR 140
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 31 MEQQFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAK 90
+E+ +VS D K F IGQG+ G VY TG VA++ MNL+Q+ +
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 91 SFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEA 150
+ E + ++ N++ + + D ++ EY+ GS D + ++ ++
Sbjct: 63 LIINEILVMRENKNPNIVNYLD-----SYLVGDELWVVMEYLAGGSLTDVVTETC--MDE 115
Query: 151 GNLGLIQRLNLLKLEMIDVGDNQLIGK 177
G + + R L LE + NQ+I +
Sbjct: 116 GQIAAVCRECLQALEFLH--SNQVIHR 140
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 31 MEQQFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAK 90
+E+ +VS D K F IGQG+ G VY TG VA++ MNL+Q+ +
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 91 SFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEA 150
+ E + ++ N++ + + D ++ EY+ GS D + ++ ++
Sbjct: 63 LIINEILVMRENKNPNIVNYLD-----SYLVGDELWVVMEYLAGGSLTDVVTETC--MDE 115
Query: 151 GNLGLIQRLNLLKLEMIDVGDNQLIGK 177
G + + R L LE + NQ+I +
Sbjct: 116 GQIAAVCRECLQALEFLH--SNQVIHR 140
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 37 MVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTEC 96
+VS D K F IGQG+ G VY TG VA++ MNL+Q+ + + E
Sbjct: 13 IVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 97 EALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNLGLI 156
+ ++ N++ + + D ++ EY+ GS D + ++ ++ G + +
Sbjct: 70 LVMRENKNPNIVNYLD-----SYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAV 122
Query: 157 QRLNLLKLEMIDVGDNQLIGK 177
R L LE + NQ+I +
Sbjct: 123 CRECLQALEFLH--SNQVIHR 141
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK-QKGAAKSFVTECEALSNVRH 104
+++ F +G G++ VYKG TG VA+K + L ++G + + E + ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYM 132
N++++ V + + L++E+M
Sbjct: 63 ENIVRLYDVIHT-----ENKLTLVFEFM 85
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 27/166 (16%)
Query: 144 SNDKLEAGNLGLIQ--RLNLLKLEMIDVGDNQLI----GKFPDFIA---NFSALEAIDIS 194
+N K EA N L+Q +L+ ++ D +N+++ K+ D + + S L+ +IS
Sbjct: 182 ANGKDEA-NQALLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIFNIS 240
Query: 195 ANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNI 254
AN+ D L +L LN S++E LP I N+S+L ++ L NR SLP +
Sbjct: 241 ANIFKY---DFLTRLY-LNGNSLTE------LPAEIKNLSNLRVLDLSHNRL-TSLPAEL 289
Query: 255 G--FNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQ 298
G F + F +N +LP F N NLQ L V N Q
Sbjct: 290 GSCFQLKYFYFF----DNMVTTLPWEFGNLCNLQFLGVEGNPLEKQ 331
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 478 IPLEVGNLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIK 537
+P E+ NL NL DLS N ++ +P L +C L+Y + N + +LP L +++
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQ 319
Query: 538 ELDLSRNNLSGQIPK 552
L + N L Q K
Sbjct: 320 FLGVEGNPLEKQFLK 334
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 10/65 (15%)
Query: 484 NLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSR 543
+L NL F++S N F + L L+L GNS + LP +K L +++ LDLS
Sbjct: 230 DLSNLQIFNISANIFKYDF---------LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSH 279
Query: 544 NNLSG 548
N L+
Sbjct: 280 NRLTS 284
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 36/219 (16%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNV-R 103
N+ ++IG+G+FG V K ++ + G + + +K+ K + F E E L +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 104 HRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE-----------AGN 152
H N+I ++ C + +G + A+ EY G+ D++ +S LE A
Sbjct: 82 HPNIINLLGAC---EHRGYLYLAI--EYAPHGNLLDFLRKSR-VLETDPAFAIANSTAST 135
Query: 153 LGLIQRLN-----------LLKLEMID---VGDNQLIGK-FPDFIANFSALEAIDISANM 197
L Q L+ L + + I N L+G+ + IA+F ++
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKK 195
Query: 198 LGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSL 236
GR+P + SLNY + N+ + +W I SL
Sbjct: 196 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL 234
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHRNLIKIITV 113
IG+G++G V+K K ET VA+K + L +G S + E L ++H+N++++ V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 114 CSS 116
S
Sbjct: 70 LHS 72
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKG-AAKSFVTECEALSNVRHRNLIKI 110
+G+G FG V Y + TG VAVK + + G E E L N+ H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 111 ITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKL 148
+C+ G+ LI E++ GS ++++ ++ +K+
Sbjct: 89 KGICTEDGGNGI---KLIMEFLPSGSLKEYLPKNKNKI 123
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 56 IGQGSFGFV----YKGKLGETGTTVAVKVMNLKQKG-AAKSFVTECEALSNVRHRNLIKI 110
+G+G FG V Y + TG VAVK + + G E E L N+ H N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 111 ITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKL 148
+C+ G+ LI E++ GS ++++ ++ +K+
Sbjct: 77 KGICTEDGGNGI---KLIMEFLPSGSLKEYLPKNKNKI 111
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 36/219 (16%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNV-R 103
N+ ++IG+G+FG V K ++ + G + + +K+ K + F E E L +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 104 HRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE-----------AGN 152
H N+I ++ C + +G + A+ EY G+ D++ +S LE A
Sbjct: 75 HPNIINLLGAC---EHRGYLYLAI--EYAPHGNLLDFLRKSR-VLETDPAFAIANSTAST 128
Query: 153 LGLIQRLN-----------LLKLEMID---VGDNQLIGK-FPDFIANFSALEAIDISANM 197
L Q L+ L + + I N L+G+ + IA+F ++
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 188
Query: 198 LGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSL 236
GR+P + SLNY + N+ + +W I SL
Sbjct: 189 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL 227
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 93/228 (40%), Gaps = 27/228 (11%)
Query: 54 NMIGQGSFGFVYKGKL----GETGTTVAVKVMNLKQKGAAK-SFVTECEALSNVRHRNLI 108
+IG G FG VYKG L G+ VA+K + + F+ E + H N+I
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 109 KIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE-----------AGNLGLIQ 157
++ V S +K + +I EYM+ G+ + ++ + + + A + +
Sbjct: 110 RLEGVISK--YKPM---MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA 164
Query: 158 RLNLLKLEM----IDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLN 213
+N + ++ I V N L+ K DF + + + + GG+IP +++
Sbjct: 165 NMNYVHRDLAARNILVNSN-LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 214 YLSISENNFSCKLPLSIWNISSL-EIISLHSNRFEGSLPLNIGFNIPN 260
Y + + + +W + + E + E +N GF +P
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPT 271
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 36/219 (16%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNV-R 103
N+ ++IG+G+FG V K ++ + G + + +K+ K + F E E L +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 104 HRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE-----------AGN 152
H N+I ++ C + +G + A+ EY G+ D++ +S LE A
Sbjct: 85 HPNIINLLGAC---EHRGYLYLAI--EYAPHGNLLDFLRKSR-VLETDPAFAIANSTAST 138
Query: 153 LGLIQRLN-----------LLKLEMID---VGDNQLIGK-FPDFIANFSALEAIDISANM 197
L Q L+ L + + I N L+G+ + IA+F ++
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 198
Query: 198 LGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSL 236
GR+P + SLNY + N+ + +W I SL
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL 237
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHRNLIKIITV 113
IG+G++G V+K K ET VA+K + L +G S + E L ++H+N++++ V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 114 CSS 116
S
Sbjct: 70 LHS 72
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 56 IGQGSFGFVYKGKLGETG-------TTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+GQG+F ++KG E G T V +KV++ + ++SF +S + H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 109 KIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSND 146
VC D L+ E++K GS + ++ ++ +
Sbjct: 76 LNYGVCVC-----GDENILVQEFVKFGSLDTYLKKNKN 108
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 56 IGQGSFGFVYKGKLG-----ETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKI 110
+G+G+FG V+ + + VAVK + + A + F E E L+ ++H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 111 ITVCSSIDFKGVDFKALIYEYMKCGSSEDWM--HQSNDKLEAGN 152
VC+ +G +++EYM+ G ++ H + KL AG
Sbjct: 86 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGG 124
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 56 IGQGSFGFVYKGKLG-----ETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKI 110
+G+G+FG V+ + + VAVK + + A + F E E L+ ++H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 111 ITVCSSIDFKGVDFKALIYEYMKCGSSEDWM--HQSNDKLEAGN 152
VC+ +G +++EYM+ G ++ H + KL AG
Sbjct: 80 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGG 118
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 56 IGQGSFGFVYKGKLG-----ETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKI 110
+G+G+FG V+ + + VAVK + + A + F E E L+ ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 111 ITVCSSIDFKGVDFKALIYEYMKCGSSEDWM--HQSNDKLEAGN 152
VC+ +G +++EYM+ G ++ H + KL AG
Sbjct: 109 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGG 147
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 97
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 339 MEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEI-KNLVNINAFGVEYNQ 397
++ LYL +N+ G + + +L+ ++TV+ +G NQ++ +PS + LV++ + N+
Sbjct: 66 LKELYLGSNQLGALPVGVFDSLT-QLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNK 123
Query: 398 LTGTIPHAIGELKNLQGLALVRNSLRGTIP 427
LT +P I L +L LAL +N L+ +IP
Sbjct: 124 LT-ELPRGIERLTHLTHLALDQNQLK-SIP 151
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 12/111 (10%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFV----TECEALSNVRH 104
++ + +G G+FG V G+ TG VAVK++N +QK + V E + L RH
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWM--HQSNDKLEAGNL 153
++IK+ V S+ DF ++ EY+ G D++ H +++EA L
Sbjct: 71 PHIIKLYQVIST----PTDF-FMVMEYVSGGELFDYICKHGRVEEMEARRL 116
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMN---LKQKGAAKSFVTECEALSNVR 103
++ + ++G+GSFG V K TG AVKV++ +KQK +S + E + L +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 104 HRNLIKI 110
H N++K+
Sbjct: 85 HPNIMKL 91
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 12/111 (10%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFV----TECEALSNVRH 104
++ + +G G+FG V G+ TG VAVK++N +QK + V E + L RH
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWM--HQSNDKLEAGNL 153
++IK+ V S+ DF ++ EY+ G D++ H +++EA L
Sbjct: 71 PHIIKLYQVIST----PTDF-FMVMEYVSGGELFDYICKHGRVEEMEARRL 116
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMN---LKQKGAAKSFVTECEALSNVR 103
++ + ++G+GSFG V K TG AVKV++ +KQK +S + E + L +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 104 HRNLIKI 110
H N++K+
Sbjct: 91 HPNIMKL 97
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 12/83 (14%)
Query: 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLK-QKGAAKSFVTECEALSNVRHRNLI---K 109
+ +G+G++ VYKGK T VA+K + L+ ++GA + + E L +++H N++
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 110 IITVCSSIDFKGVDFKALIYEYM 132
II S+ L++EY+
Sbjct: 68 IIHTEKSL--------TLVFEYL 82
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 94
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 41 ADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECE 97
A A +F +G+G FG VY + ++ +A+KV+ L++ G E E
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 98 ALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
S++RH N++++ F LI EY G+
Sbjct: 61 IQSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGT 94
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 65 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 93
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 94
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 92 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 120
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 97
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 16/143 (11%)
Query: 30 PMEQQFPMVSYADLSKATNN-FSASNMIGQGSFGFVYKGKLGETGTTVAVKVM----NLK 84
P +Q + L+K F +G+GS+G VYK ETG VA+K + +L+
Sbjct: 10 PPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ 69
Query: 85 QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQS 144
+ S + +C++ V++ FK D ++ EY GS D +
Sbjct: 70 EIIKEISIMQQCDSPHVVKYYGSY----------FKNTDL-WIVMEYCGAGSVSDIIRLR 118
Query: 145 NDKLEAGNLGLIQRLNLLKLEMI 167
N L + I + L LE +
Sbjct: 119 NKTLTEDEIATILQSTLKGLEYL 141
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 70 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 98
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 97
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 94
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMN---LKQKGAAKSFVTECEALSNVR 103
++ + ++G+GSFG V K TG AVKV++ +KQK +S + E + L +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 104 HRNLIKI 110
H N++K+
Sbjct: 108 HPNIMKL 114
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 94
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 92 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 120
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMN---LKQKGAAKSFVTECEALSNVR 103
++ + ++G+GSFG V K TG AVKV++ +KQK +S + E + L +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 104 HRNLIKI 110
H N++K+
Sbjct: 109 HPNIMKL 115
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 94
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 97
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 94
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 164 LEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSL-CQLRSLNYLSISENNF 222
L+ +D+ N +I +F+ LE +D + L S+ LR+L YL IS +
Sbjct: 375 LKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 433
Query: 223 SCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNA 282
+SSLE++ + N F+ + +I + N+ FL + Q P +F++
Sbjct: 434 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL 493
Query: 283 SNLQVLDVYKNH 294
S+LQVL++ N
Sbjct: 494 SSLQVLNMASNQ 505
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 159 LNLLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGR-IPDSLCQLRSLNYLSI 217
L+L L +D+ F S+LE + ++ N +PD +LR+L +L +
Sbjct: 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 477
Query: 218 SENNFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLP 276
S+ P + ++SSL+++++ SN+ + S+P I + ++ + + N + S P
Sbjct: 478 SQCQLEQLSPTAFNSLSSLQVLNMASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 484 NLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGS-LPLSLKTLKSIKELDLS 542
+LRNL D+S H + ++LE L + GNSF + LP L+++ LDLS
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478
Query: 543 RNNLSGQIP 551
+ L P
Sbjct: 479 QCQLEQLSP 487
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 95
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 95
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 99
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 96
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 95
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 97
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 83 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 111
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 97
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 96
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 99
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 99
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + Q A K+ E + + + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIV 76
Query: 109 KI 110
++
Sbjct: 77 RL 78
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + + +A+KV+ L++ G E E S++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
RH N++++ F LI EY G+
Sbjct: 63 RHPNILRLYGY-----FHDATRVYLILEYAPLGT 91
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + Q A K+ E + + + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIV 76
Query: 109 KI 110
++
Sbjct: 77 RL 78
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + Q A K+ E + + + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIV 76
Query: 109 KI 110
++
Sbjct: 77 RL 78
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 76
Query: 109 KI-ITVCSSIDFKGVDFKALIYEYM 132
++ SS + K V + L+ +Y+
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYV 101
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 12/101 (11%)
Query: 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAK-----SFVTEC 96
D+ + + +G+G F VYK + T VA+K + L + AK + + E
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 97 EALSNVRHRNLIKIIT-------VCSSIDFKGVDFKALIYE 130
+ L + H N+I ++ + DF D + +I +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD 104
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 11/119 (9%)
Query: 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA--KSFVTECEAL 99
D + IG GSFG VYKGK VAVK++N+ ++F E L
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNLGLIQR 158
RH N++ + ++ A++ ++ + S +H S K E L I R
Sbjct: 75 RKTRHVNILLFMGYSTAPQL------AIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR 127
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
+ +G+G++G VYK K G VA+K + L + +G + + E L + H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 106 NLIKIITVCSS 116
N++ +I V S
Sbjct: 80 NIVSLIDVIHS 90
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMN---LKQKGAAKSFVTECEALSNVR 103
++ + ++G+GSFG V K TG AVKV++ +KQK +S + E + L +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 104 HRNLIKI 110
H N+ K+
Sbjct: 85 HPNIXKL 91
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHR 105
+ +G+G++G VYK K G VA+K + L + +G + + E L + H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 106 NLIKIITVCSS 116
N++ +I V S
Sbjct: 80 NIVSLIDVIHS 90
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNVRH 104
++F +G+G FG VY + + +A+KV+ L+++G E E S++RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 105 RNLIKI 110
N++++
Sbjct: 74 PNILRM 79
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNVRH 104
++F +G+G FG VY + + +A+KV+ L+++G E E S++RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 105 RNLIKI 110
N++++
Sbjct: 75 PNILRM 80
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
Query: 39 SYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA--KSFVTEC 96
S D + IG GSFG VYKGK VAVK++N+ ++F E
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEV 59
Query: 97 EALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNLGLI 156
L RH N++ + + A++ ++ + S +H S K E L I
Sbjct: 60 GVLRKTRHVNILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHASETKFEMKKLIDI 113
Query: 157 QR 158
R
Sbjct: 114 AR 115
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 161 LLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISEN 220
L KL + +G NQ+ P +A +AL ++++ N L P + L++L YL++ N
Sbjct: 264 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 319
Query: 221 NFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLP 276
N S P+S +++ L+ + ++N+ L N+ N+N+LS G N + P
Sbjct: 320 NISDISPVS--SLTKLQRLFFYNNKVSDVSSL---ANLTNINWLSAGHNQISDLTP 370
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 161 LLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPD--SLCQLRSLNYLSIS 218
L L+ + G NQ+ P +AN + LE +DIS+N ++ D L +L +L L +
Sbjct: 155 LTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSN----KVSDISVLAKLTNLESLIAT 207
Query: 219 ENNFSCKLPLSIWNISSLEIISLHSNRFE 247
N S PL I +++L+ +SL+ N+ +
Sbjct: 208 NNQISDITPLGI--LTNLDELSLNGNQLK 234
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITV 113
IG+G++G VYK + G T A+K + L++ +G + + E L ++H N++K+ V
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 114 CSS 116
+
Sbjct: 69 IHT 71
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 103 RHRNLIKI 110
RH N++++
Sbjct: 71 RHPNILRL 78
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNVRH 104
+F +G+G FG VY + ++ +A+KV+ L++ G E E S++RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
N++++ F LI EY G+
Sbjct: 72 PNILRLYGY-----FHDATRVYLILEYAPLGT 98
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITV 113
IG+G++G VYK + G T A+K + L++ +G + + E L ++H N++K+ V
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 114 CSS 116
+
Sbjct: 69 IHT 71
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 18/117 (15%)
Query: 30 PMEQQFPMVSYADL---SKATNNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVM 81
PM Q+ P++ L NN IG+G+FG V++ + E T VAVK+
Sbjct: 26 PMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKM- 84
Query: 82 NLKQKGAAK---SFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCG 135
LK++ +A F E ++ + N++K++ VC+ G L++EYM G
Sbjct: 85 -LKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV----GKPM-CLLFEYMAYG 135
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
Query: 39 SYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA--KSFVTEC 96
S D + IG GSFG VYKGK VAVK++N+ ++F E
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEV 71
Query: 97 EALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNLGLI 156
L RH N++ + + A++ ++ + S +H S K E L I
Sbjct: 72 GVLRKTRHVNILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHASETKFEMKKLIDI 125
Query: 157 QR 158
R
Sbjct: 126 AR 127
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITV 113
IG+G++G VYK + G T A+K + L++ +G + + E L ++H N++K+ V
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 114 CSS 116
+
Sbjct: 69 IHT 71
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNV 102
A +F +G+G FG VY + ++ +A+KV+ L++ G E E S++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 103 RHRNLIKI 110
RH N++++
Sbjct: 71 RHPNILRL 78
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNVRH 104
++F +G+G FG VY + + +A+KV+ L+++G E E S++RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 105 RNLIKI 110
N++++
Sbjct: 74 PNILRM 79
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 161 LLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISEN 220
L KL + +G NQ+ P +A +AL ++++ N L P + L++L YL++ N
Sbjct: 259 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 314
Query: 221 NFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLP 276
N S P+S +++ L+ + ++N+ L N+ N+N+LS G N + P
Sbjct: 315 NISDISPVS--SLTKLQRLFFYNNKVSDVSSL---ANLTNINWLSAGHNQISDLTP 365
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 11/89 (12%)
Query: 161 LLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPD--SLCQLRSLNYLSIS 218
L L+ ++ G NQ+ P +AN + LE +DIS+N ++ D L +L +L L +
Sbjct: 150 LTSLQQLNFG-NQVTDLKP--LANLTTLERLDISSN----KVSDISVLAKLTNLESLIAT 202
Query: 219 ENNFSCKLPLSIWNISSLEIISLHSNRFE 247
N S PL I +++L+ +SL+ N+ +
Sbjct: 203 NNQISDITPLGI--LTNLDELSLNGNQLK 229
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNVRH 104
+F +G+G FG VY + ++ +A+KV+ L++ G E E S++RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
N++++ F LI EY G+
Sbjct: 72 PNILRLYGY-----FHDATRVYLILEYAPLGT 98
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 161 LLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISEN 220
L KL + +G NQ+ P +A +AL ++++ N L P + L++L YL++ N
Sbjct: 260 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 315
Query: 221 NFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLP 276
N S P+S +++ L+ + ++N+ L N+ N+N+LS G N + P
Sbjct: 316 NISDISPVS--SLTKLQRLFFYNNKVSDVSSL---ANLTNINWLSAGHNQISDLTP 366
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 161 LLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPD--SLCQLRSLNYLSIS 218
L L+ + NQ+ P +AN + LE +DIS+N ++ D L +L +L L +
Sbjct: 150 LTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSN----KVSDISVLAKLTNLESLIAT 203
Query: 219 ENNFSCKLPLSIWNISSLEIISLHSNRFE 247
N S PL I +++L+ +SL+ N+ +
Sbjct: 204 NNQISDITPLGI--LTNLDELSLNGNQLK 230
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 161 LLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISEN 220
L KL + +G NQ+ P +A +AL ++++ N L P + L++L YL++ N
Sbjct: 260 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 315
Query: 221 NFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLP 276
N S P+S +++ L+ + ++N+ L N+ N+N+LS G N + P
Sbjct: 316 NISDISPVS--SLTKLQRLFFYNNKVSDVSSL---ANLTNINWLSAGHNQISDLTP 366
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 161 LLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPD--SLCQLRSLNYLSIS 218
L L+ ++ NQ+ P +AN + LE +DIS+N ++ D L +L +L L +
Sbjct: 150 LTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSN----KVSDISVLAKLTNLESLIAT 203
Query: 219 ENNFSCKLPLSIWNISSLEIISLHSNRFE 247
N S PL I +++L+ +SL+ N+ +
Sbjct: 204 NNQISDITPLGI--LTNLDELSLNGNQLK 230
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMN---LKQKGAAKSFVTECEALSNVRH 104
+NF ++G+GSFG V ++ ETG AVKV+ + Q + +TE LS R+
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
+ + C F+ D + E++ G
Sbjct: 83 HPFLTQLFCC----FQTPDRLFFVMEFVNGGD 110
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 77
Query: 109 KI 110
++
Sbjct: 78 RL 79
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 76
Query: 109 KI 110
++
Sbjct: 77 RL 78
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 76
Query: 109 KI 110
++
Sbjct: 77 RL 78
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 76
Query: 109 KI 110
++
Sbjct: 77 RL 78
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 94/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTV--AVKVMNLKQ---KGAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V V +M L++ A K + E +++V
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 109 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 162
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 163 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 220
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 256
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 36 PMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVT- 94
P S AD N+ +G+GSFG V TG VA+K++N +K AKS +
Sbjct: 3 PKSSLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN--KKVLAKSDMQG 59
Query: 95 ----ECEALSNVRHRNLIKIITVCSSID 118
E L +RH ++IK+ V S D
Sbjct: 60 RIEREISYLRLLRHPHIIKLYDVIKSKD 87
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGA-AKSFVTECEALSNVRHR 105
+++F +++G+G++G V TG VA+K + K A + E + L + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 106 NLIKIITVCSSIDFKGVDFKALIYEYMK 133
N+I I + F+ + +I E M+
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQ 97
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 36 PMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVT- 94
P S AD N+ +G+GSFG V TG VA+K++N +K AKS +
Sbjct: 2 PKSSLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN--KKVLAKSDMQG 58
Query: 95 ----ECEALSNVRHRNLIKIITVCSSID 118
E L +RH ++IK+ V S D
Sbjct: 59 RIEREISYLRLLRHPHIIKLYDVIKSKD 86
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 80
Query: 109 KI 110
++
Sbjct: 81 RL 82
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGA-AKSFVTECEALSNVRHR 105
+++F +++G+G++G V TG VA+K + K A + E + L + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 106 NLIKIITVCSSIDFKGVDFKALIYEYMK 133
N+I I + F+ + +I E M+
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQ 97
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGA-AKSFVTECEALSNVRHR 105
+++F +++G+G++G V TG VA+K + K A + E + L + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 106 NLIKIITVCSSIDFKGVDFKALIYEYMK 133
N+I I + F+ + +I E M+
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQ 97
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 89
Query: 109 KI 110
++
Sbjct: 90 RL 91
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 95
Query: 109 KI 110
++
Sbjct: 96 RL 97
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHRNL 107
F ++G G++G VYKG+ +TG A+KVM++ ++ K + + S+ HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH--HRNI 83
Query: 108 IKIITVCSSIDFKGVDFK-ALIYEYMKCGSSED 139
+ G+D + L+ E+ GS D
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD 116
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 84
Query: 109 KI 110
++
Sbjct: 85 RL 86
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 88
Query: 109 KI 110
++
Sbjct: 89 RL 90
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 164 LEMIDVGDN-QLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNF 222
LE +D+ DN QL P L + + L P L +L YL + +NN
Sbjct: 81 LEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNL 140
Query: 223 SCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNA 282
+ ++ +L + LH NR S+P + + +++ L + QN+ PH+F +
Sbjct: 141 QALPDNTFRDLGNLTHLFLHGNRIP-SVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDL 199
Query: 283 SNLQVLDVYKNHFS 296
L L ++ N+ S
Sbjct: 200 GRLMTLYLFANNLS 213
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 55 MIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAK-----SFVTECEALSNVRHRNLIK 109
M+G+GSFG V K K T AVKV+N K +AK + + E E L + H N++K
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 110 IITV 113
+ +
Sbjct: 86 LFEI 89
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 88
Query: 109 KI 110
++
Sbjct: 89 RL 90
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVT-----ECEALSNVR 103
N+ +G+GSFG V TG VA+K++N +K AKS + E L +R
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN--KKVLAKSDMQGRIEREISYLRLLR 62
Query: 104 HRNLIKIITVCSSID 118
H ++IK+ V S D
Sbjct: 63 HPHIIKLYDVIKSKD 77
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 81
Query: 109 KI 110
++
Sbjct: 82 RL 83
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 41 ADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECE 97
A A +F +G+G FG VY + + +A+KV+ L++ G E E
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 98 ALSNVRHRNLIKI 110
S++RH N++++
Sbjct: 61 IQSHLRHPNILRL 73
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKS----FVTECEALSNVRHRNLIKI 110
IG+GSF VYKG +T TTV V L+ + KS F E E L ++H N+++
Sbjct: 34 IGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRF 90
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVT-----ECEALSNVR 103
N+ +G+GSFG V TG VA+K++N +K AKS + E L +R
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN--KKVLAKSDMQGRIEREISYLRLLR 66
Query: 104 HRNLIKIITVCSSID 118
H ++IK+ V S D
Sbjct: 67 HPHIIKLYDVIKSKD 81
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 104
Query: 109 KI 110
++
Sbjct: 105 RL 106
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 110
Query: 109 KI 110
++
Sbjct: 111 RL 112
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRHR 105
+F N++G+GSF VY+ + TG VA+K+++ K + G + E + ++H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 106 NLIKI 110
+++++
Sbjct: 72 SILEL 76
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 110
Query: 109 KI 110
++
Sbjct: 111 RL 112
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ 85
N+FS +IG+G FG VY + +TG A+K ++ K+
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR 225
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ 85
N+FS +IG+G FG VY + +TG A+K ++ K+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR 226
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ 85
N+FS +IG+G FG VY + +TG A+K ++ K+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR 226
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ 85
N+FS +IG+G FG VY + +TG A+K ++ K+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR 226
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFV----TECEALSNVRHRNLIK 109
+ +G G+FG V GK TG VAVK++N +QK + V E + L RH ++IK
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILN-RQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 110 IITVCSS 116
+ V S+
Sbjct: 81 LYQVIST 87
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 112
Query: 109 KI 110
++
Sbjct: 113 RL 114
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVK 79
K + F M GQG+FG V GK TG +VA+K
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK 54
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 114
Query: 109 KI 110
++
Sbjct: 115 RL 116
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+++ + +IG GSFG VY+ KL ++G VA+K + ++ + E + + + H N++
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 155
Query: 109 KI 110
++
Sbjct: 156 RL 157
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV--RHRNLIKIITV 113
IG+G FG V++GK G VAVK+ + +++ +S+ E E V RH N++ I
Sbjct: 50 IGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 104
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV--RHRNLIKIITV 113
IG+G FG V++GK G VAVK+ + +++ +S+ E E V RH N++ I
Sbjct: 12 IGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 66
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA--KSFVTECEALSNVRHR 105
+ IG+GS+G V+K + +TG VA+K + K + E L ++H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 106 NLIKIITVCSSIDFKGVDFKALIYEY 131
NL+ ++ V F+ L++EY
Sbjct: 63 NLVNLLEV-----FRRKRRLHLVFEY 83
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV--RHRNLIKIITV 113
IG+G FG V++GK G VAVK+ + +++ +S+ E E V RH N++ I
Sbjct: 11 IGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 65
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMN---LKQKGAAKSFVTECEALSNVRH 104
++F +IG+G+F V K+ +TG A+K+MN + ++G F E + L N
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
R + ++ F+ ++ L+ EY G
Sbjct: 121 RWITQL-----HFAFQDENYLYLVMEYYVGGD 147
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV--RHRNLIKIITV 113
IG+G FG V++GK G VAVK+ + +++ +S+ E E V RH N++ I
Sbjct: 37 IGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 91
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV--RHRNLIKIITV 113
IG+G FG V++GK G VAVK+ + +++ +S+ E E V RH N++ I
Sbjct: 17 IGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 71
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV--RHRNLIKIITV 113
IG+G FG V++GK G VAVK+ + +++ +S+ E E V RH N++ I
Sbjct: 14 IGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 68
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 55 MIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAK-----SFVTECEALSNVRHRNLIK 109
M+G+GSFG V K K T AVKV+N K +AK + + E E L + H N++K
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 110 IITV 113
+ +
Sbjct: 86 LFEI 89
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 55 MIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAK-----SFVTECEALSNVRHRNLIK 109
M+G+GSFG V K K T AVKV+N K +AK + + E E L + H N++K
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 110 IITV 113
+ +
Sbjct: 86 LFEI 89
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 39 SYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA--KSFVTEC 96
S D + IG GSFG VYKGK VAVK++N+ ++F E
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEV 83
Query: 97 EALSNVRHRNLI 108
L RH N++
Sbjct: 84 GVLRKTRHVNIL 95
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 39 SYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA--KSFVTEC 96
S D + IG GSFG VYKGK VAVK++N+ ++F E
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEV 57
Query: 97 EALSNVRHRNLI 108
L RH N++
Sbjct: 58 GVLRKTRHVNIL 69
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 161 LLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISEN 220
L KL + +G NQ+ P +A +AL ++++ N L P + L++L YL++ N
Sbjct: 263 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 318
Query: 221 NFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLP 276
N S P+S +++ L+ + +N+ L N+ N+N+LS G N + P
Sbjct: 319 NISDISPVS--SLTKLQRLFFANNKVSDVSSL---ANLTNINWLSAGHNQISDLTP 369
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 161 LLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPD--SLCQLRSLNYLSIS 218
L L+ + G NQ+ P +AN + LE +DIS+N ++ D L +L +L L +
Sbjct: 154 LTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSN----KVSDISVLAKLTNLESLIAT 206
Query: 219 ENNFSCKLPLSIWNISSLEIISLHSNRFE 247
N S PL I +++L+ +SL+ N+ +
Sbjct: 207 NNQISDITPLGI--LTNLDELSLNGNQLK 233
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 161 LLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISEN 220
L KL + +G NQ+ P +A +AL ++++ N L P + L++L YL++ N
Sbjct: 259 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 314
Query: 221 NFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLP 276
N S P+S +++ L+ + +N+ L N+ N+N+LS G N + P
Sbjct: 315 NISDISPVS--SLTKLQRLFFSNNKVSDVSSL---ANLTNINWLSAGHNQISDLTP 365
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 11/89 (12%)
Query: 161 LLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPD--SLCQLRSLNYLSIS 218
L L+ ++ G NQ+ P +AN + LE +DIS+N ++ D L +L +L L +
Sbjct: 150 LTSLQQLNFG-NQVTDLKP--LANLTTLERLDISSN----KVSDISVLAKLTNLESLIAT 202
Query: 219 ENNFSCKLPLSIWNISSLEIISLHSNRFE 247
N S PL I +++L+ +SL+ N+ +
Sbjct: 203 NNQISDITPLGI--LTNLDELSLNGNQLK 229
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 25/142 (17%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCS 115
+G G FG V+ G T VA+K + + +SF+ E + + ++H L+++ V S
Sbjct: 17 LGNGQFGEVWMGTWN-GNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKL------------EAGNLGLIQRLNLLK 163
++ EYM GS D++ + A + I+R+N +
Sbjct: 75 EEPI------YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIH 128
Query: 164 LEM----IDVGDNQLIGKFPDF 181
++ I VG N LI K DF
Sbjct: 129 RDLRSANILVG-NGLICKIADF 149
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 39 SYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA--KSFVTEC 96
S D + IG GSFG VYKGK VAVK++N+ ++F E
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEV 60
Query: 97 EALSNVRHRNLI 108
L RH N++
Sbjct: 61 GVLRKTRHVNIL 72
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL 83
F+ + IG+GSFG VYKG T VA+K+++L
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDL 54
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 161 LLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISEN 220
L KL + +G NQ+ P +A +AL ++++ N L P + L++L YL++ N
Sbjct: 260 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFN 315
Query: 221 NFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLP 276
N S P+S +++ L+ + +N+ L N+ N+N+LS G N + P
Sbjct: 316 NISDISPVS--SLTKLQRLFFSNNKVSDVSSL---ANLTNINWLSAGHNQISDLTP 366
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 161 LLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPD--SLCQLRSLNYLSIS 218
L L+ + NQ+ P +AN + LE +DIS+N ++ D L +L +L L +
Sbjct: 150 LTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSN----KVSDISVLAKLTNLESLIAT 203
Query: 219 ENNFSCKLPLSIWNISSLEIISLHSNRFE 247
N S PL I +++L+ +SL+ N+ +
Sbjct: 204 NNQISDITPLGI--LTNLDELSLNGNQLK 230
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA--KSFVTECEAL 99
D + IG GSFG VYKGK VAVK++N+ ++F E L
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 100 SNVRHRNLI 108
RH N++
Sbjct: 59 RKTRHVNIL 67
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 39 SYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA--KSFVTEC 96
S D + IG GSFG VYKGK VAVK++N+ ++F E
Sbjct: 26 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEV 82
Query: 97 EALSNVRHRNLI 108
L RH N++
Sbjct: 83 GVLRKTRHVNIL 94
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 39 SYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA--KSFVTEC 96
S D + IG GSFG VYKGK VAVK++N+ ++F E
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEV 60
Query: 97 EALSNVRHRNLI 108
L RH N++
Sbjct: 61 GVLRKTRHVNIL 72
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA--KSFVTECEAL 99
D + IG GSFG VYKGK VAVK++N+ ++F E L
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 100 SNVRHRNLI 108
RH N++
Sbjct: 59 RKTRHVNIL 67
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 31 MEQQFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAK 90
+Q +P +++ +G G+FG V++ TG A K + + +
Sbjct: 34 WKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE 93
Query: 91 SFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
+ E + +S +RH L+ + F+ + +IYE+M G
Sbjct: 94 TVRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMVMIYEFMSGGE 134
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 39 SYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA--KSFVTEC 96
S D + IG GSFG VYKGK VAVK++N+ ++F E
Sbjct: 19 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEV 75
Query: 97 EALSNVRHRNLI 108
L RH N++
Sbjct: 76 GVLRKTRHVNIL 87
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 39 SYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA--KSFVTEC 96
S D + IG GSFG VYKGK VAVK++N+ ++F E
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEV 83
Query: 97 EALSNVRHRNLI 108
L RH N++
Sbjct: 84 GVLRKTRHVNIL 95
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 43 LSKATNNFSASNMIGQGSFGFVYKGK-LGETGTTVAVKVMNLK--QKGAAKSFVTECEAL 99
L +A + IG+G++G V+K + L G VA+K + ++ ++G S + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 100 SNV---RHRNLIKIITVCS 115
++ H N++++ VC+
Sbjct: 66 RHLETFEHPNVVRLFDVCT 84
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA--KSFVTECEAL 99
D + IG GSFG VYKGK VAVK++N+ ++F E L
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 100 SNVRHRNLI 108
RH N++
Sbjct: 59 RKTRHVNIL 67
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 43 LSKATNNFSASNMIGQGSFGFVYKGK-LGETGTTVAVKVMNLK--QKGAAKSFVTECEAL 99
L +A + IG+G++G V+K + L G VA+K + ++ ++G S + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 100 SNV---RHRNLIKIITVCS 115
++ H N++++ VC+
Sbjct: 66 RHLETFEHPNVVRLFDVCT 84
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKL----GETG-TTVAVKVMNLKQKGAA---KSFVTECEAL 99
N +G+G FG V K G G TTVAVK+ LK+ + + ++E L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM--LKENASPSELRDLLSEFNVL 80
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145
V H ++IK+ CS G LI EY K GS ++ +S
Sbjct: 81 KQVNHPHVIKLYGACSQ---DGPLL--LIVEYAKYGSLRGFLRESR 121
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 43 LSKATNNFSASNMIGQGSFGFVYKGK-LGETGTTVAVKVMNLK--QKGAAKSFVTECEAL 99
L +A + IG+G++G V+K + L G VA+K + ++ ++G S + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 100 SNV---RHRNLIKIITVCS 115
++ H N++++ VC+
Sbjct: 66 RHLETFEHPNVVRLFDVCT 84
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 31 MEQQFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAK 90
+Q +P +++ +G G+FG V++ TG A K + + +
Sbjct: 140 WKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE 199
Query: 91 SFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
+ E + +S +RH L+ + F+ + +IYE+M G
Sbjct: 200 TVRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMVMIYEFMSGGE 240
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKL----GETG-TTVAVKVMNLKQKGAA---KSFVTECEAL 99
N +G+G FG V K G G TTVAVK+ LK+ + + ++E L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM--LKENASPSELRDLLSEFNVL 80
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145
V H ++IK+ CS G LI EY K GS ++ +S
Sbjct: 81 KQVNHPHVIKLYGACSQ---DGPLL--LIVEYAKYGSLRGFLRESR 121
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFV-TECEALS 100
D + + IG G F V TG VA+K+M+ G+ + TE EAL
Sbjct: 4 DYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK 63
Query: 101 NVRHRNLIKIITV 113
N+RH+++ ++ V
Sbjct: 64 NLRHQHICQLYHV 76
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKL----GETG-TTVAVKVMNLKQKGAA---KSFVTECEAL 99
N +G+G FG V K G G TTVAVK+ LK+ + + ++E L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM--LKENASPSELRDLLSEFNVL 80
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145
V H ++IK+ CS G LI EY K GS ++ +S
Sbjct: 81 KQVNHPHVIKLYGACSQ---DGPLL--LIVEYAKYGSLRGFLRESR 121
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCS 115
IG+GS G V + +G VAVK M+L+++ + E + + +H N++++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 84
Query: 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQS---NDKLEAGNLGLIQRLNLL 162
+ D ++ E+++ G+ D + + +++ A L ++Q L++L
Sbjct: 85 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVL 132
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCS 115
IG+GS G V + +G VAVK M+L+++ + E + + +H N++++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 93
Query: 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQS---NDKLEAGNLGLIQRLNLL 162
+ D ++ E+++ G+ D + + +++ A L ++Q L++L
Sbjct: 94 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVL 141
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCS 115
IG+GS G V + +G VAVK M+L+++ + E + + +H N++++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 88
Query: 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQS---NDKLEAGNLGLIQRLNLL 162
+ D ++ E+++ G+ D + + +++ A L ++Q L++L
Sbjct: 89 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVL 136
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTE--CEALSNVRHR 105
+N +IG+G +G VYKG L E VAVKV + + ++F+ E + + H
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDE--RPVAVKVFSFANR---QNFINEKNIYRVPLMEHD 67
Query: 106 NLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
N+ + I + G L+ EY GS
Sbjct: 68 NIARFIVGDERVTADGRMEYLLVMEYYPNGS 98
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCS 115
IG+GS G V + +G VAVK M+L+++ + E + + +H N++++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 95
Query: 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQSN---DKLEAGNLGLIQRLNLL 162
+ D ++ E+++ G+ D + + +++ A L ++Q L++L
Sbjct: 96 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVL 143
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSF---VTECEALSNVRHRN 106
FS IG GSFG VY + VA+K M+ K + + + + E L +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 107 LIK 109
I+
Sbjct: 77 TIQ 79
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 32/55 (58%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKI 110
IG+GS G V + +G VAVK+M+L+++ + E + + +H N++++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEM 107
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Query: 42 DLSKATNNFSASNMIGQGSFGFVYKGKLG-ETGTTVAVKVMNLKQKGAAKS----FVTEC 96
D+ F+ M+G+G FG V + +L E G+ V V V LK A S F+ E
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 97 EALSNVRHRNLIKIITVCSSIDFKG-VDFKALIYEYMKCGS 136
+ H ++ K++ V KG + +I +MK G
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGD 117
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 37 MVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTEC 96
+V D +NF IG+GS G V + +G VAVK M+L+++ + E
Sbjct: 66 VVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEV 122
Query: 97 EALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSN---DKLEAGNL 153
+ + +H N++++ + D ++ E+++ G+ D + + +++ A L
Sbjct: 123 VIMRDYQHENVVEMYN-----SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL 177
Query: 154 GLIQRLNLL 162
++Q L++L
Sbjct: 178 AVLQALSVL 186
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 62 GFVYKGKLGETGTTVAVKVMNLKQKGAAKS--FVTECEALSNVRHRNLIKIITVCSSIDF 119
G ++KG+ G + VKV+ ++ KS F EC L H N++ ++ C S
Sbjct: 24 GELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS--- 78
Query: 120 KGVDFKALIYEYMKCGSSEDWMHQ 143
LI +M GS + +H+
Sbjct: 79 PPAPHPTLITHWMPYGSLYNVLHE 102
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSF---VTECEALSNVRHRN 106
FS IG GSFG VY + VA+K M+ K + + + + E L +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 107 LIK 109
I+
Sbjct: 116 TIQ 118
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 53 SNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAA--KSFVTECEALSNVRHRNLI 108
S IG GSFG VYKGK VAVK++ + ++F E L RH N++
Sbjct: 41 STRIGSGSFGTVYKGKW---HGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL 95
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 46 ATNNF---SASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV 102
A N+F S + ++G G FG V+K + TG +A K++ + + E ++ +
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
H NLI++ F+ + L+ EY+ G
Sbjct: 144 DHANLIQLYDA-----FESKNDIVLVMEYVDGGE 172
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 2/135 (1%)
Query: 164 LEMIDVGDN-QLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNF 222
LE +D+ DN QL P L + + L P L +L YL + +N
Sbjct: 81 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL 140
Query: 223 SCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNA 282
+ ++ +L + LH NR S+P + +++ L + QN PH+F +
Sbjct: 141 QALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDL 199
Query: 283 SNLQVLDVYKNHFSG 297
L L ++ N+ S
Sbjct: 200 GRLMTLYLFANNLSA 214
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 2/135 (1%)
Query: 164 LEMIDVGDN-QLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNF 222
LE +D+ DN QL P L + + L P L +L YL + +N
Sbjct: 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL 141
Query: 223 SCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNA 282
+ ++ +L + LH NR S+P + +++ L + QN PH+F +
Sbjct: 142 QALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDL 200
Query: 283 SNLQVLDVYKNHFSG 297
L L ++ N+ S
Sbjct: 201 GRLMTLYLFANNLSA 215
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 37 MVSYADL------SKATNNFSASNMIGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQ 85
MVS AD+ A + S +GQGSFG VY+G E T VA+K +N
Sbjct: 1 MVSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 86 KGAAK-SFVTECEALSNVRHRNLIKIITVCS 115
+ F+ E + ++++++ V S
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVS 91
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVT---------ECE 97
+ +S + +G G+FGFV+ E V VK + K+K ++ E
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIK-KEKVLEDCWIEDPKLGKVTLEIA 81
Query: 98 ALSNVRHRNLIKIITV 113
LS V H N+IK++ +
Sbjct: 82 ILSRVEHANIIKVLDI 97
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVK---VMNLKQKGAAKSFVTECEALSNVRHR 105
NF IG+G F VY+ G VA+K + +L A + E + L + H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 106 NLIK 109
N+IK
Sbjct: 93 NVIK 96
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 37 MVSYADL------SKATNNFSASNMIGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQ 85
MVS AD+ A + S +GQGSFG VY+G E T VA+K +N
Sbjct: 1 MVSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 86 KGAAK-SFVTECEALSNVRHRNLIKIITVCS 115
+ F+ E + ++++++ V S
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVS 91
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 37 MVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTEC 96
+VS D + NF IG+GS G V TG VAVK M+L+++ + E
Sbjct: 37 VVSPGDPREYLANFIK---IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEV 93
Query: 97 EALSNVRHRNLIKIIT 112
+ + H N++ + +
Sbjct: 94 VIMRDYHHDNVVDMYS 109
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 96/229 (41%), Gaps = 31/229 (13%)
Query: 30 PMEQQFPMVSYADLSKATN--NFSASNMIGQGSFGFVYKGKL---GETGTTVAVKVMNL- 83
P + P + + +K + N S ++G G FG V G+L + +VA+K + +
Sbjct: 25 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 84 ---KQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDW 140
KQ+ + F+ E + H N+I++ V + K V ++ EYM+ GS + +
Sbjct: 85 YTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSF 136
Query: 141 MHQSNDKLEAGNL-GLIQRLNLLKLEMIDVG-------------DNQLIGKFPDFIANFS 186
+ + + + L G+++ + + D+G ++ L+ K DF +
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 187 ALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISS 235
+ + + GG+IP ++ Y + + + +W + S
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCS 115
IG+GS G V + +G VAVK M+L+++ + E + + +H N++++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 215
Query: 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQSN---DKLEAGNLGLIQRLNLL 162
+ D ++ E+++ G+ D + + +++ A L ++Q L++L
Sbjct: 216 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVL 263
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 96/229 (41%), Gaps = 31/229 (13%)
Query: 30 PMEQQFPMVSYADLSKATN--NFSASNMIGQGSFGFVYKGKL---GETGTTVAVKVMNL- 83
P + P + + +K + N S ++G G FG V G+L + +VA+K + +
Sbjct: 25 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 84 ---KQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDW 140
KQ+ + F+ E + H N+I++ V + K V ++ EYM+ GS + +
Sbjct: 85 YTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSF 136
Query: 141 MHQSNDKLEAGNL-GLIQRLNLLKLEMIDVG-------------DNQLIGKFPDFIANFS 186
+ + + + L G+++ + + D+G ++ L+ K DF +
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 187 ALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISS 235
+ + + GG+IP ++ Y + + + +W + S
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 56 IGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEALSNVRHRNLIK 109
+GQGSFG VY+G GE T VAVK +N + F+ E + ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 110 IITVCS 115
++ V S
Sbjct: 85 LLGVVS 90
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM---NLKQKGAAKSFVTECEALSNVRH 104
++F +G+G FG VY + ++ VA+KV+ ++++G E E +++ H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 105 RNLIKI 110
N++++
Sbjct: 83 PNILRL 88
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 56 IGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEALSNVRHRNLIK 109
+GQGSFG VY+G GE T VAVK +N + F+ E + ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 110 IITVCS 115
++ V S
Sbjct: 86 LLGVVS 91
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 191 IDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEGSL 250
+D+ N + D L L ++EN S P + N+ +L + L SNR + +
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LI 95
Query: 251 PLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKN 293
PL + + N+ L + +N L + F + NL+ L+V N
Sbjct: 96 PLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDN 138
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 165 EMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSC 224
++D+G N++ D A+F LE ++++ N++ P + L +L L + N
Sbjct: 35 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL 94
Query: 225 KLPLSIWN-ISSLEIISLHSNRFEGSLPLNIGF-NIPNVNFLSVGQNNFTGSLPHSFSNA 282
+PL ++ +S+L + + N+ + L+ F ++ N+ L VG N+ +FS
Sbjct: 95 -IPLGVFTGLSNLTKLDISENKI--VILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGL 151
Query: 283 SNLQVLDVYK 292
++L+ L + K
Sbjct: 152 NSLEQLTLEK 161
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 44 SKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFV-TECEALSNV 102
S+ +F +G+G FG V++ K A+K + L + A+ V E +AL+ +
Sbjct: 2 SRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 61
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNLGLIQRLN 160
H +++ + ++ ++ + E S DW S ++A ++ I+R++
Sbjct: 62 EHPGIVRYFN--AWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVK-IRRMD 116
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 56 IGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEALSNVRHRNLIK 109
+GQGSFG VY+G GE T VAVK +N + F+ E + ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 110 IITVCS 115
++ V S
Sbjct: 85 LLGVVS 90
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 56 IGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEALSNVRHRNLIK 109
+GQGSFG VY+G GE T VAVK +N + F+ E + ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 110 IITVCS 115
++ V S
Sbjct: 85 LLGVVS 90
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 76 DNPHVCRLLGICLTSTVQ------LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 187
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 223
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 56 IGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEALSNVRHRNLIK 109
+GQGSFG VY+G GE T VAVK +N + F+ E + ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 110 IITVCS 115
++ V S
Sbjct: 85 LLGVVS 90
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 56 IGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEALSNVRHRNLIK 109
+GQGSFG VY+G GE T VAVK +N + F+ E + ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 110 IITVCS 115
++ V S
Sbjct: 85 LLGVVS 90
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 56 IGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEALSNVRHRNLIK 109
+GQGSFG VY+G GE T VAVK +N + F+ E + ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 110 IITVCS 115
++ V S
Sbjct: 82 LLGVVS 87
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 96/229 (41%), Gaps = 31/229 (13%)
Query: 30 PMEQQFPMVSYADLSKATN--NFSASNMIGQGSFGFVYKGKL---GETGTTVAVKVMNL- 83
P + P + + +K + N S ++G G FG V G+L + +VA+K + +
Sbjct: 23 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 82
Query: 84 ---KQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDW 140
KQ+ + F+ E + H N+I++ V + K V ++ EYM+ GS + +
Sbjct: 83 YTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSF 134
Query: 141 MHQSNDKLEAGNL-GLIQRLNLLKLEMIDVG-------------DNQLIGKFPDFIANFS 186
+ + + + L G+++ + + D+G ++ L+ K DF +
Sbjct: 135 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 194
Query: 187 ALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISS 235
+ + + GG+IP ++ Y + + + +W + S
Sbjct: 195 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQ---KGAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 79 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 190
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 226
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 337 SQMEMLYLNTNKF----GGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFG 392
+++ +LYLN NK G+F + + NL + + DN++ LVN+
Sbjct: 61 TKLRLLYLNDNKLQTLPAGIF-KELKNLE----TLWVTDNKLQALPIGVFDQLVNLAELR 115
Query: 393 VEYNQLTGTIPHAIGELKNLQGLALVRNSLR 423
++ NQL P L L L+L N L+
Sbjct: 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 337 SQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEI-KNLVNINAFGVEY 395
+ + L L +NK + ++ L+ K+ ++ + DN++ T+P+ I K L N+ V
Sbjct: 37 ADTKKLDLQSNKLSSLPSKAFHRLT-KLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTD 94
Query: 396 NQLTGTIPHAIGELKNLQGLALVRNSLRGTIP 427
N+L +L NL L L RN L+ P
Sbjct: 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPP 126
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 208 QLRSLNYLSISENNFSCKLPLSIWN-ISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSV 266
+L++L L +++N LP+ +++ + +L + L N+ + SLP + ++ + +LS+
Sbjct: 83 ELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSL 140
Query: 267 GQNNFTGSLPHS-FSNASNLQVLDVYKNHF 295
G N SLP F ++L+ L +Y N
Sbjct: 141 GYNELQ-SLPKGVFDKLTSLKELRLYNNQL 169
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKL---GETGTTVAVKVMNL----KQKGAAKSFVTECEAL 99
N S ++G G FG V G+L + +VA+K + + KQ+ + F+ E +
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIM 100
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-GLIQR 158
H N+I++ V + K V ++ EYM+ GS + ++ + + + L G+++
Sbjct: 101 GQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 159 LNLLKLEMIDVG-------------DNQLIGKFPDFIANFSALEAIDISANMLGGRIPDS 205
+ + D+G ++ L+ K DF + + + + GG+IP
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 206 LCQLRSLNYLSISENNFSCKLPLSIWNISS 235
++ Y + + + +W + S
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKL---GETGTTVAVKVMNL----KQKGAAKSFVTECEAL 99
N S ++G G FG V G+L + +VA+K + + KQ+ + F+ E +
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIM 100
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-GLIQR 158
H N+I++ V + K V ++ EYM+ GS + ++ + + + L G+++
Sbjct: 101 GQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 159 LNLLKLEMIDVG-------------DNQLIGKFPDFIANFSALEAIDISANMLGGRIPDS 205
+ + D+G ++ L+ K DF + + + + GG+IP
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 206 LCQLRSLNYLSISENNFSCKLPLSIWNISS 235
++ Y + + + +W + S
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 188
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 224
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 56 IGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEALSNVRHRNLIK 109
+GQGSFG VY+G GE T VAVK +N + F+ E + ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 110 IITVCS 115
++ V S
Sbjct: 84 LLGVVS 89
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 76 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 187
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 223
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKL---GETGTTVAVKVMNL----KQKGAAKSFVTECEAL 99
N S ++G G FG V G+L + +VA+K + + KQ+ + F+ E +
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIM 100
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-GLIQR 158
H N+I++ V + K V ++ EYM+ GS + ++ + + + L G+++
Sbjct: 101 GQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 159 LNLLKLEMIDVG-------------DNQLIGKFPDFIANFSALEAIDISANMLGGRIPDS 205
+ + D+G ++ L+ K DF + + + + GG+IP
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 206 LCQLRSLNYLSISENNFSCKLPLSIWNISS 235
++ Y + + + +W + S
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 93/219 (42%), Gaps = 29/219 (13%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 158 RLNLL---KLEMIDVGDNQLIGKFPDF--IANFSA---LEAIDISANMLGGRIPDSLCQL 209
+N L +L D+ ++ K P I +F L A + + GG++P L
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 210 RSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
S+ + + + +++W E+++ S ++G
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 224
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 189
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 225
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 186
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQ---KGAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 186
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 222
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 10/104 (9%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRH 104
N+F ++G+G+FG V + TG A+K++ + K VTE L N RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKL 148
L + F+ D + EY G E + H S +++
Sbjct: 65 PFLTAL-----KYAFQTHDRLCFVMEYANGG--ELFFHLSRERV 101
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 164 LEMIDVGDNQLIGKFPDFIA--NFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENN 221
++ + + +NQL+ + ++ L +D+S N L S L SL YLS+ NN
Sbjct: 224 IQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNN 283
Query: 222 FSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNF--------LSVGQNNFTG 273
P S + +S+L +SL + S+ L NI + +F L++ NN
Sbjct: 284 IQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPS 343
Query: 274 SLPHSFSNASNLQVLDVYKNHFSGQV 299
+ ++F+ +L+ L + K S Q
Sbjct: 344 TKSNTFTGLVSLKYLSLSKTFTSLQT 369
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 179 PDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEI 238
P + + L ID+S N + PD+ LRSLN L + N + +LP S++
Sbjct: 49 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQ 107
Query: 239 ISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHF 295
+ L + L ++ ++ N+N LS+ N +FS +Q + + +N F
Sbjct: 108 LLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 189
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 225
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 189
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 225
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 72 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAE 125
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 126 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 183
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 219
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 179 PDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEI 238
P + + L ID+S N + PD+ LRSLN L + N + +LP S++
Sbjct: 49 PGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQ 107
Query: 239 ISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHF 295
+ L + L ++ ++ N+N LS+ N +FS +Q + + +N F
Sbjct: 108 LLLLNANKINXLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 93/219 (42%), Gaps = 29/219 (13%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 158 RLNLL---KLEMIDVGDNQLIGKFPDF--IANF---SALEAIDISANMLGGRIPDSLCQL 209
+N L +L D+ ++ K P I +F L A + + GG++P L
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 210 RSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
S+ + + + +++W E+++ S ++G
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 224
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 56 IGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEALSNVRHRNLIK 109
+G+ FG VYKG L GE VA+K + K +G + F E + ++H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 110 IITVCS 115
++ V +
Sbjct: 94 LLGVVT 99
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Query: 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAK--SFVTECEAL 99
D+ + + IG GSFG V++ + G+ VAVK++ + A + F+ E +
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIM 88
Query: 100 SNVRHRNLIKII-TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQS 144
+RH N++ + V + +++ EY+ GS +H+S
Sbjct: 89 KRLRHPNIVLFMGAVTQPPNL------SIVTEYLSRGSLYRLLHKS 128
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 10/104 (9%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRH 104
N+F ++G+G+FG V + TG A+K++ + K VTE L N RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKL 148
L + F+ D + EY G E + H S +++
Sbjct: 65 PFLTAL-----KYAFQTHDRLCFVMEYANGG--ELFFHLSRERV 101
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 110 IITVC 114
++ +C
Sbjct: 114 LLGIC 118
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 93/219 (42%), Gaps = 29/219 (13%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 79 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 158 RLNLL---KLEMIDVGDNQLIGKFPDF--IANF---SALEAIDISANMLGGRIPDSLCQL 209
+N L +L D+ ++ K P I +F L A + + GG++P L
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 210 RSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
S+ + + + +++W E+++ S ++G
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 226
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 188
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 224
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRH 104
N+F ++G+G+FG V + TG A+K++ + K VTE L N RH
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 189
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 225
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 10/104 (9%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRH 104
N+F ++G+G+FG V + TG A+K++ + K VTE L N RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKL 148
L + F+ D + EY G E + H S +++
Sbjct: 65 PFLTAL-----KYAFQTHDRLCFVMEYANGG--ELFFHLSRERV 101
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 81 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 134
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 135 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 192
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 228
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMN 82
K +N+ ++IG+GS+G+VY VA+K +N
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVN 62
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 89/214 (41%), Gaps = 37/214 (17%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKL---GETGTTVAVKVMNL----KQKGAAKSFVTECEAL 99
N S ++G G FG V G+L + +VA+K + + KQ+ + F+ E +
Sbjct: 32 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIM 88
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKA----LIYEYMKCGSSEDWMHQSNDKLEAGNL-G 154
H N+I++ +GV K+ ++ EYM+ GS + ++ + + + L G
Sbjct: 89 GQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 139
Query: 155 LIQRLNLLKLEMIDVG-------------DNQLIGKFPDFIANFSALEAIDISANMLGGR 201
+++ + + D+G ++ L+ K DF + + + + GG+
Sbjct: 140 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 199
Query: 202 IPDSLCQLRSLNYLSISENNFSCKLPLSIWNISS 235
IP ++ Y + + + +W + S
Sbjct: 200 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 87/210 (41%), Gaps = 29/210 (13%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKL---GETGTTVAVKVMNL----KQKGAAKSFVTECEAL 99
N S ++G G FG V G+L + +VA+K + + KQ+ + F+ E +
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIM 100
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-GLIQR 158
H N+I++ V + K V ++ EYM+ GS + ++ + + + L G+++
Sbjct: 101 GQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 159 LNLLKLEMIDVG-------------DNQLIGKFPDFIANFSALEAIDISANMLGGRIPDS 205
+ + D+G ++ L+ K DF + + + GG+IP
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR 215
Query: 206 LCQLRSLNYLSISENNFSCKLPLSIWNISS 235
++ Y + + + +W + S
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQ---KGAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 186
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 10/104 (9%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRH 104
N+F ++G+G+FG V + TG A+K++ + K VTE L N RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKL 148
L + F+ D + EY G E + H S +++
Sbjct: 68 PFLTAL-----KYAFQTHDRLCFVMEYANGG--ELFFHLSRERV 104
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Query: 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAK--SFVTECEAL 99
D+ + + IG GSFG V++ + G+ VAVK++ + A + F+ E +
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIM 88
Query: 100 SNVRHRNLIKII-TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQS 144
+RH N++ + V + +++ EY+ GS +H+S
Sbjct: 89 KRLRHPNIVLFMGAVTQPPNL------SIVTEYLSRGSLYRLLHKS 128
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRH 104
N+F ++G+G+FG V + TG A+K++ + K VTE L N RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 100 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 153
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 154 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 211
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 247
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 193
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 229
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 110 IITVC 114
++ +C
Sbjct: 115 LLGIC 119
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 10/104 (9%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRH 104
N+F ++G+G+FG V + TG A+K++ + K VTE L N RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKL 148
L + F+ D + EY G E + H S +++
Sbjct: 65 PFLTAL-----KYAFQTHDRLCFVMEYANGG--ELFFHLSRERV 101
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 93/219 (42%), Gaps = 29/219 (13%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 158 RLNLL---KLEMIDVGDNQLIGKFPDF--IANFSA---LEAIDISANMLGGRIPDSLCQL 209
+N L +L D+ ++ K P I +F L A + + GG++P L
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 210 RSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
S+ + + + +++W E+++ S ++G
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 224
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 93/219 (42%), Gaps = 29/219 (13%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 158 RLNLL---KLEMIDVGDNQLIGKFPDF--IANF---SALEAIDISANMLGGRIPDSLCQL 209
+N L +L D+ ++ K P I +F L A + + GG++P L
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 210 RSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
S+ + + + +++W E+++ S ++G
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 222
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 93/219 (42%), Gaps = 29/219 (13%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 158 RLNLL---KLEMIDVGDNQLIGKFPDF--IANFSA---LEAIDISANMLGGRIPDSLCQL 209
+N L +L D+ ++ K P I +F L A + + GG++P L
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 210 RSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
S+ + + + +++W E+++ S ++G
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 229
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 110 IITVCSSIDFKGVDFKALIYEYMKCGS 136
++ +C + ++ YMK G
Sbjct: 155 LLGIC----LRSEGSPLVVLPYMKHGD 177
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 85 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 138
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 139 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 196
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 110 IITVC 114
++ +C
Sbjct: 91 LLGIC 95
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 56 IGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEALSNVRHRNLIK 109
+G+ FG VYKG L GE VA+K + K +G + F E + ++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 110 IITVCS 115
++ V +
Sbjct: 77 LLGVVT 82
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 186
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 222
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 110 IITVCSSIDFKGVDFKALIYEYMKCGS 136
++ +C + ++ YMK G
Sbjct: 95 LLGIC----LRSEGSPLVVLPYMKHGD 117
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 110 IITVCSSIDFKGVDFKALIYEYMKCGS 136
++ +C + ++ YMK G
Sbjct: 101 LLGIC----LRSEGSPLVVLPYMKHGD 123
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 110 IITVCSSIDFKGVDFKALIYEYMKCGS 136
++ +C + ++ YMK G
Sbjct: 97 LLGIC----LRSEGSPLVVLPYMKHGD 119
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 110 IITVC 114
++ +C
Sbjct: 93 LLGIC 97
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 110 IITVC 114
++ +C
Sbjct: 94 LLGIC 98
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 110 IITVC 114
++ +C
Sbjct: 96 LLGIC 100
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++G G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 69 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 122
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 180
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 216
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 110 IITVC 114
++ +C
Sbjct: 95 LLGIC 99
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 110 IITVCSSIDFKGVDFKALIYEYMKCGS 136
++ +C + ++ YMK G
Sbjct: 96 LLGIC----LRSEGSPLVVLPYMKHGD 118
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 110 IITVC 114
++ +C
Sbjct: 96 LLGIC 100
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 110 IITVC 114
++ +C
Sbjct: 97 LLGIC 101
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 50 FSASNMI-----GQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRH 104
F S++I G+G FG K ETG + +K + + ++F+ E + + + H
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH 66
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGS 136
N++K I V K ++F I EY+K G+
Sbjct: 67 PNVLKFIGVLYKD--KRLNF---ITEYIKGGT 93
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 110 IITVC 114
++ +C
Sbjct: 88 LLGIC 92
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 55 MIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIKI 110
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 111 ITVC 114
+ +C
Sbjct: 95 LGIC 98
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 54 NMIGQGSFGFVYKGKLGE-TGTTV--AVKVMN-LKQKGAAKSFVTECEALSNVRHRNLIK 109
+IG+G FG VY G L + G + AVK +N + G F+TE + + H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 110 IITVC 114
++ +C
Sbjct: 96 LLGIC 100
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 87/210 (41%), Gaps = 29/210 (13%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKL---GETGTTVAVKVMNL----KQKGAAKSFVTECEAL 99
N S ++G G FG V G+L + +VA+K + + KQ+ + F+ E +
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIM 100
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-GLIQR 158
H N+I++ V + K V ++ EYM+ GS + ++ + + + L G+++
Sbjct: 101 GQFDHPNIIRLEGVVTK--SKPV---MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 159 LNLLKLEMIDVG-------------DNQLIGKFPDFIANFSALEAIDISANMLGGRIPDS 205
+ + D+G ++ L+ K DF + + + GG+IP
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIR 215
Query: 206 LCQLRSLNYLSISENNFSCKLPLSIWNISS 235
++ Y + + + +W + S
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 89/214 (41%), Gaps = 37/214 (17%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKL---GETGTTVAVKVMNL----KQKGAAKSFVTECEAL 99
N S ++G G FG V G+L + +VA+K + + KQ+ + F+ E +
Sbjct: 15 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIM 71
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKA----LIYEYMKCGSSEDWMHQSNDKLEAGNL-G 154
H N+I++ +GV K+ ++ EYM+ GS + ++ + + + L G
Sbjct: 72 GQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 122
Query: 155 LIQRLNLLKLEMIDVG-------------DNQLIGKFPDFIANFSALEAIDISANMLGGR 201
+++ + + D+G ++ L+ K DF + + + + GG+
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 202 IPDSLCQLRSLNYLSISENNFSCKLPLSIWNISS 235
IP ++ Y + + + +W + S
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL 83
F+ IG+GSFG V+KG T VA+K+++L
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL 57
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL 83
F+ IG+GSFG V+KG T VA+K+++L
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL 42
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL 83
F+ IG+GSFG V+KG T VA+K+++L
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL 42
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMN--LKQKGAAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V G TG VA+K + + + AK E L ++RH N+I ++ V
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 114 CS 115
+
Sbjct: 93 FT 94
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEAL 99
A + S +GQGSFG VY+G E T VA+K +N + F+ E +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 100 SNVRHRNLIKIITVCS 115
++++++ V S
Sbjct: 83 KEFNCHHVVRLLGVVS 98
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 30 PMEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ 85
PM Q+ P +L+K + + +G G++G V +TG VAVK ++
Sbjct: 2 PMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 61
Query: 86 KG--AAKSFVTECEALSNVRHRNLIKIITV 113
+ AK E L +++H N+I ++ V
Sbjct: 62 QSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEAL 99
A + S +GQGSFG VY+G E T VA+K +N + F+ E +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 100 SNVRHRNLIKIITVCS 115
++++++ V S
Sbjct: 83 KEFNCHHVVRLLGVVS 98
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL 83
F+ IG+GSFG V+KG T VA+K+++L
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL 62
>pdb|2JQD|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of Lanp
Length = 169
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 492 DLSENHFSNEIPVTLSACTTLEYLHLQGNSFSG-SLPLSLKTLKSIKELDL 541
+LSEN S ++ V C L++L+L GN S LK L+++K LDL
Sbjct: 75 ELSENRISGDLEVLAEKCPNLKHLNLSGNKIKDLSTIEPLKKLENLKSLDL 125
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEAL 99
A + S +GQGSFG VY+G E T VA+K +N + F+ E +
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 100 SNVRHRNLIKIITVCS 115
++++++ V S
Sbjct: 68 KEFNCHHVVRLLGVVS 83
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In
Plant
Length = 483
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
N F IG GSFG +Y G +T VA+K+ N+K K
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK 45
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEAL 99
A + S +GQGSFG VY+G E T VA+K +N + F+ E +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 100 SNVRHRNLIKIITVCS 115
++++++ V S
Sbjct: 70 KEFNCHHVVRLLGVVS 85
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEAL 99
A + S +GQGSFG VY+G E T VA+K +N + F+ E +
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 100 SNVRHRNLIKIITVCS 115
++++++ V S
Sbjct: 105 KEFNCHHVVRLLGVVS 120
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEAL 99
A + S +GQGSFG VY+G E T VA+K +N + F+ E +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 100 SNVRHRNLIKIITVCS 115
++++++ V S
Sbjct: 70 KEFNCHHVVRLLGVVS 85
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEAL 99
A + S +GQGSFG VY+G E T VA+K +N + F+ E +
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 100 SNVRHRNLIKIITVCS 115
++++++ V S
Sbjct: 74 KEFNCHHVVRLLGVVS 89
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEAL 99
A + S +GQGSFG VY+G E T VA+K +N + F+ E +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 100 SNVRHRNLIKIITVCS 115
++++++ V S
Sbjct: 77 KEFNCHHVVRLLGVVS 92
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEAL 99
A + S +GQGSFG VY+G E T VA+K +N + F+ E +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 100 SNVRHRNLIKIITVCS 115
++++++ V S
Sbjct: 77 KEFNCHHVVRLLGVVS 92
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 24 KSSRTLPMEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVK 79
+ S L M Q+ P +L+K + + +G G++G V +TG VAVK
Sbjct: 17 RGSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK 76
Query: 80 VMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
++ + AK E L +++H N+I ++ V
Sbjct: 77 KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 46 ATNNFSASNMIGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQKGAAK-SFVTECEAL 99
A + S +GQGSFG VY+G E T VA+K +N + F+ E +
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 100 SNVRHRNLIKIITVCS 115
++++++ V S
Sbjct: 73 KEFNCHHVVRLLGVVS 88
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIK 109
++ +IG GSFG V++ KL E+ KV+ K+ E + + V+H N++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN-----RELQIMRIVKHPNVVD 96
Query: 110 IIT-VCSSIDFKGVDFKALIYEYM 132
+ S+ D K F L+ EY+
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYV 120
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein
Kinase Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein
Kinase Mst4 In Complex With An Quinazolin
Length = 301
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL 83
F+ IG+GSFG V+KG T VA+K+++L
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDL 58
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMN 82
+N+ ++IG+GS+G+VY T VA+K +N
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVN 60
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+F +IG G FG V+K K G T +K + + A + E +AL+ + H N++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 109 KIITVCSSIDF 119
D+
Sbjct: 68 HYNGCWDGFDY 78
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 62 GFVYKGKLGETGTTVAVKVMNLKQKGAAKS--FVTECEALSNVRHRNLIKIITVCSSIDF 119
G ++KG+ G + VKV+ ++ KS F EC L H N++ ++ C S
Sbjct: 24 GELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS--- 78
Query: 120 KGVDFKALIYEYMKCGSSEDWMHQ 143
LI + GS + +H+
Sbjct: 79 PPAPHPTLITHWXPYGSLYNVLHE 102
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVM--NLKQKGAAKSFVTECEALSNVR-HRNLIKIIT 112
+G+G++G V+K TG VAVK + + A+ E L+ + H N++ ++
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 113 VCSSIDFKGVDFKALIYEYMKCG 135
V + + + V L+++YM+
Sbjct: 77 VLRADNDRDV---YLVFDYMETD 96
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 26 SRTLPMEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM 81
S L M Q+ P +L+K + + +G G++G V +TG VAVK +
Sbjct: 1 SHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL 60
Query: 82 NLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+ + AK E L +++H N+I ++ V
Sbjct: 61 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 26 SRTLPMEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM 81
S L M Q+ P +L+K + + +G G++G V +TG VAVK +
Sbjct: 2 SHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL 61
Query: 82 NLKQKG--AAKSFVTECEALSNVRHRNLIKIITVCS 115
+ + AK E L +++H N+I ++ V +
Sbjct: 62 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 97
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 8/102 (7%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFV-TECEALSNVRHRN 106
+F +G+G FG V++ K A+K + L + A+ V E +AL+ + H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 107 LIKIITVC----SSIDFKGVDFKALIYEYMKCGSSE---DWM 141
+++ ++ + K +Y M+ E DWM
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM 106
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 26 SRTLPMEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM 81
S L M Q+ P +L+K + + +G G++G V +TG VAVK +
Sbjct: 2 SHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL 61
Query: 82 NLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+ + AK E L +++H N+I ++ V
Sbjct: 62 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 92/212 (43%), Gaps = 43/212 (20%)
Query: 54 NMIGQGSFGFVYKGKL---GETGTTVAVKVMN----LKQKGAAKSFVTECEALSNVRHRN 106
+IG G FG V +G+L G+ + VA+K + +Q+ + F++E + H N
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR---REFLSEASIMGQFEHPN 78
Query: 107 LIKII-TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNLGLIQRLNLLK-- 163
+I++ V +S+ ++ E+M+ G+ + ++ +L G +IQ + +L+
Sbjct: 79 IIRLEGVVTNSMPV------MILTEFMENGALDSFL-----RLNDGQFTVIQLVGMLRGI 127
Query: 164 -------LEMIDVG----------DNQLIGKFPDF-IANFSALEAID-ISANMLGGRIPD 204
EM V ++ L+ K DF ++ F + D + LGG+IP
Sbjct: 128 ASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPI 187
Query: 205 SLCQLRSLNYLSISENNFSCKLPLSIWNISSL 236
++ + + + + + +W + S
Sbjct: 188 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMSF 219
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI 108
+F +IG G FG V+K K G T ++ + + A + E +AL+ + H N++
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIV 68
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 41 ADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEA 98
AD N+ IG+G+F V + TG VAVK+++ Q + + E
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRI 66
Query: 99 LSNVRHRNLIKIITVCSS 116
+ + H N++K+ V +
Sbjct: 67 MKVLNHPNIVKLFEVIET 84
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 92/221 (41%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++ G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 193
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 229
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 41 ADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEA 98
AD N+ IG+G+F V + TG VAVK+++ Q + + E
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRI 66
Query: 99 LSNVRHRNLIKIITVCSS 116
+ + H N++K+ V +
Sbjct: 67 MKVLNHPNIVKLFEVIET 84
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 10/110 (9%)
Query: 17 GRRKHTQKSSRT------LPMEQQFPMVSYADLSKATNNFSASNMIGQGSFGFVYKG--- 67
G R HT S T + E + M S D IG+G FG V++G
Sbjct: 353 GVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYM 412
Query: 68 KLGETGTTVAVKV-MNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSS 116
VA+K N + F+ E + H +++K+I V +
Sbjct: 413 SPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE 462
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 41 ADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEA 98
AD N+ IG+G+F V + TG VAVK+++ Q + + E
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRI 66
Query: 99 LSNVRHRNLIKIITVCSS 116
+ + H N++K+ V +
Sbjct: 67 MKVLNHPNIVKLFEVIET 84
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 92/221 (41%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQK---GAAKSFVTECEALSNV 102
F ++ G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 193
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 229
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 10/110 (9%)
Query: 17 GRRKHTQKSSRT------LPMEQQFPMVSYADLSKATNNFSASNMIGQGSFGFVYKG--- 67
G R HT S T + E + M S D IG+G FG V++G
Sbjct: 353 GVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYM 412
Query: 68 KLGETGTTVAVKV-MNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSS 116
VA+K N + F+ E + H +++K+I V +
Sbjct: 413 SPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE 462
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 37 MVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVT 94
+ S D N+ IG+G+F V + TG VAVK+++ Q + +
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR 63
Query: 95 ECEALSNVRHRNLIKIITVCSS 116
E + + H N++K+ V +
Sbjct: 64 EVRIMKILNHPNIVKLFEVIET 85
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 22/118 (18%)
Query: 54 NMIGQGSFGFVYKGKL---GETGTTVAVKVMN----LKQKGAAKSFVTECEALSNVRHRN 106
+IG G FG V +G+L G+ + VA+K + +Q+ + F++E + H N
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR---REFLSEASIMGQFEHPN 76
Query: 107 LIKII-TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNLGLIQRLNLLK 163
+I++ V +S+ ++ E+M+ G+ + ++ +L G +IQ + +L+
Sbjct: 77 IIRLEGVVTNSMPV------MILTEFMENGALDSFL-----RLNDGQFTVIQLVGMLR 123
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
Query: 37 MVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVT 94
+ S AD N+ IG+G+F V + TG VA+K+++ Q + +
Sbjct: 4 IASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR 63
Query: 95 ECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWM 141
E + + H N++K+ V + LI EY G D++
Sbjct: 64 EVRIMKILNHPNIVKLFEVIET-----EKTLYLIMEYASGGEVFDYL 105
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 54 NMIGQGSFGFVYKGKLGETGTTVAVKV--MNLKQKGAAKSFVTECE---ALSNVRHRNLI 108
++G G FG V+KG G ++ + V ++ K +SF + A+ ++ H +++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 109 KIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKL 148
+++ +C + L+ +Y+ GS D + Q L
Sbjct: 97 RLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGAL 130
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 92/221 (41%), Gaps = 33/221 (14%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVM--NLKQ---KGAAKSFVTECEALSNV 102
F ++ G+FG VYKG G V + V L++ A K + E +++V
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-----GLIQ 157
+ ++ +++ +C + + LI + M G D++ + D + + L + +
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 158 RLNLL---KLEMIDVGDNQLIGKFP------DF-IANFSALEAIDISANMLGGRIPDSLC 207
+N L +L D+ ++ K P DF +A E + A GG++P
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWM 186
Query: 208 QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
L S+ + + + +++W E+++ S ++G
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVW-----ELMTFGSKPYDG 222
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 54 NMIGQGSFGFVYKGKLGETGTTVAVKV--MNLKQKGAAKSFVTECE---ALSNVRHRNLI 108
++G G FG V+KG G ++ + V ++ K +SF + A+ ++ H +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 109 KIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKL 148
+++ +C + L+ +Y+ GS D + Q L
Sbjct: 79 RLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGAL 112
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAK-SFVTECEALSNVRHRNLIKIITVC 114
+G G FG V KLG+ V V +K+ ++ F E + + + H L+K VC
Sbjct: 16 LGSGQFGVV---KLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 115 S 115
S
Sbjct: 73 S 73
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 95/229 (41%), Gaps = 31/229 (13%)
Query: 30 PMEQQFPMVSYADLSKATN--NFSASNMIGQGSFGFVYKGKL---GETGTTVAVKVMNL- 83
P + P + + +K + N S ++G G FG V G+L + +VA+K + +
Sbjct: 25 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 84 ---KQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDW 140
KQ+ + F+ E + H N+I++ V + K V ++ E M+ GS + +
Sbjct: 85 YTEKQR---RDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV---MIVTEXMENGSLDSF 136
Query: 141 MHQSNDKLEAGNL-GLIQRLNLLKLEMIDVG-------------DNQLIGKFPDFIANFS 186
+ + + + L G+++ + + D+G ++ L+ K DF +
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 187 ALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISS 235
+ + + GG+IP ++ Y + + + +W + S
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 46 ATNNFSASNMIGQGSFGFVYKG-KLGETGTTVAVKVMNLKQKGA---AKSFVTECEALSN 101
A + + ++G+G FG VY+G G + V V K+ + F++E + N
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 102 VRHRNLIKIITV 113
+ H +++K+I +
Sbjct: 82 LDHPHIVKLIGI 93
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 41 ADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEA 98
AD N+ IG+G+F V + TG VAV++++ Q + + E
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRI 66
Query: 99 LSNVRHRNLIKIITVCSS 116
+ + H N++K+ V +
Sbjct: 67 MKVLNHPNIVKLFEVIET 84
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 41 ADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEA 98
AD N+ IG+G+F V + TG VAV++++ Q + + E
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRI 66
Query: 99 LSNVRHRNLIKIITVCSS 116
+ + H N++K+ V +
Sbjct: 67 MKVLNHPNIVKLFEVIET 84
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 46 ATNNFSASNMIGQGSFGFVYKG-KLGETGTTVAVKVMNLKQKGA---AKSFVTECEALSN 101
A + + ++G+G FG VY+G G + V V K+ + F++E + N
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 102 VRHRNLIKIITV 113
+ H +++K+I +
Sbjct: 66 LDHPHIVKLIGI 77
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 46 ATNNFSASNMIGQGSFGFVYKG-KLGETGTTVAVKVMNLKQKGA---AKSFVTECEALSN 101
A + + ++G+G FG VY+G G + V V K+ + F++E + N
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 102 VRHRNLIKIITV 113
+ H +++K+I +
Sbjct: 70 LDHPHIVKLIGI 81
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 10/104 (9%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRH 104
N F ++G+G+FG V K TG A+K++ + K +TE L N RH
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKL 148
L + F+ D + EY G E + H S +++
Sbjct: 68 PFLTAL-----KYSFQTHDRLCFVMEYANGG--ELFFHLSRERV 104
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 10/104 (9%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRH 104
N F ++G+G+FG V K TG A+K++ + K +TE L N RH
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKL 148
L + F+ D + EY G E + H S +++
Sbjct: 70 PFLTAL-----KYSFQTHDRLCFVMEYANGG--ELFFHLSRERV 106
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 10/104 (9%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRH 104
N F ++G+G+FG V K TG A+K++ + K +TE L N RH
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKL 148
L + F+ D + EY G E + H S +++
Sbjct: 69 PFLTAL-----KYSFQTHDRLCFVMEYANGG--ELFFHLSRERV 105
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 87/210 (41%), Gaps = 29/210 (13%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKL---GETGTTVAVKVMNL----KQKGAAKSFVTECEAL 99
N S ++G G FG V G+L + +VA+K + + KQ+ + F+ E +
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIM 100
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL-GLIQR 158
H N+I++ V + K V ++ E M+ GS + ++ + + + L G+++
Sbjct: 101 GQFDHPNIIRLEGVVTK--SKPV---MIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 159 LNLLKLEMIDVG-------------DNQLIGKFPDFIANFSALEAIDISANMLGGRIPDS 205
+ + D+G ++ L+ K DF + + + + GG+IP
Sbjct: 156 IASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 206 LCQLRSLNYLSISENNFSCKLPLSIWNISS 235
++ Y + + + +W + S
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 39 SYADLSKAT-NNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVM-NLKQKGAAKS 91
S +DL + N + +G G+FG VY+G++ + VAVK + + +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 92 FVTECEALSNVRHRNLIKIITV 113
F+ E +S + H+N+++ I V
Sbjct: 81 FLMEALIISKLNHQNIVRCIGV 102
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 39 SYADLSKAT-NNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVM-NLKQKGAAKS 91
S +DL + N + +G G+FG VY+G++ + VAVK + + +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 92 FVTECEALSNVRHRNLIKIITV 113
F+ E +S + H+N+++ I V
Sbjct: 95 FLMEALIISKLNHQNIVRCIGV 116
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 342 LYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGT 401
LYL+ N+F V + ++N +T+I + +N+IS N+ + + YN+L
Sbjct: 36 LYLDGNQFTLV-PKELSNYK-HLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCI 93
Query: 402 IPHAIGELKNLQGLALVRNSL 422
P LK+L+ L+L N +
Sbjct: 94 PPRTFDGLKSLRLLSLHGNDI 114
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 39 SYADLSKAT-NNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVM-NLKQKGAAKS 91
S +DL + N + +G G+FG VY+G++ + VAVK + + +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 92 FVTECEALSNVRHRNLIKIITV 113
F+ E +S H+N+++ I V
Sbjct: 95 FLMEALIISKFNHQNIVRCIGV 116
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 80
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDV 109
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRN 106
N+ IG+G+F V + TG VAVK+++ Q + + E + + H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 107 LIKIITVCSS 116
++K+ V +
Sbjct: 68 IVKLFEVIET 77
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLI 108
F +G G+F V + TG AVK + K KG S E L ++H N++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 109 KIITVCSS 116
+ + S
Sbjct: 84 ALEDIYES 91
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 20 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 79
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 80 SIIHAKRTYRELRLLKHMKHENVIGLLDV 108
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 20 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 79
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 80 SIIHAKRTYRELRLLKHMKHENVIGLLDV 108
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 90/213 (42%), Gaps = 29/213 (13%)
Query: 54 NMIGQGSFGFVYKGKLGETGT----TVAVKVMNLKQKGAA-KSFVTECEALSNVRHRNLI 108
++G G+FG VYKG G VA+KV+ A K + E ++ V +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 109 KIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL--------GLIQRLN 160
+++ +C + + L+ + M G D + ++ +L + +L + L
Sbjct: 83 RLLGICLTSTVQ------LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE 136
Query: 161 LLKLEMIDVGDNQLIGKFPDF--IANFSALEAIDISANML---GGRIPDSLCQLRSLNYL 215
++L D+ ++ K P+ I +F +DI GG++P ++ +
Sbjct: 137 DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVP-----IKWMALE 191
Query: 216 SISENNFSCKLPLSIWNISSLEIISLHSNRFEG 248
SI F+ + + + ++ E+++ + ++G
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMTFGAKPYDG 224
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 80
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDV 109
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 10/104 (9%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRH 104
N F ++G+G+FG V K TG A+K++ + K +TE L N RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKL 148
L + F+ D + EY G E + H S +++
Sbjct: 208 PFLTAL-----KYSFQTHDRLCFVMEYANGG--ELFFHLSRERV 244
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 10/104 (9%)
Query: 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRH 104
N F ++G+G+FG V K TG A+K++ + K +TE L N RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 105 RNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKL 148
L + F+ D + EY G E + H S +++
Sbjct: 211 PFLTAL-----KYSFQTHDRLCFVMEYANGG--ELFFHLSRERV 247
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 80
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDV 109
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 39 SYADLSKAT-NNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVM-NLKQKGAAKS 91
S +DL + N + +G G+FG VY+G++ + VAVK + + +
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 92 FVTECEALSNVRHRNLIKIITV 113
F+ E +S H+N+++ I V
Sbjct: 72 FLMEALIISKFNHQNIVRCIGV 93
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDV 91
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITVCS 115
AK E L +++H N+I ++ V +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFT 91
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 72
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDV 101
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITVCS 115
AK E L +++H N+I ++ V +
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDVFT 93
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 72
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDV 101
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKS---FVTECEALSNVRHRN 106
+ +G G FG+V + +TG VA+K +Q+ + K+ + E + + + H N
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIK--QCRQELSPKNRERWCLEIQIMKKLNHPN 73
Query: 107 LIKIITVCSSID-FKGVDFKALIYEYMKCGSSEDWMHQ 143
++ V + D L EY + G +++Q
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ 111
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 39 SYADLSKAT-NNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVM-NLKQKGAAKS 91
S +DL + N + +G G+FG VY+G++ + VAVK + + +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 92 FVTECEALSNVRHRNLIKIITV 113
F+ E +S H+N+++ I V
Sbjct: 80 FLMEALIISKFNHQNIVRCIGV 101
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLLDV 100
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITVCS 115
AK E L +++H N+I ++ V +
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLLDVFT 102
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 87 G--AAKSFVTECEALSNVRHRNLIKIITVCS 115
AK E L +++H N+I ++ V +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFT 91
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKL---GETGTTVAVKVMNL----KQKGAAKSFVTECEAL 99
N S ++G G FG V G+L + +VA+K + + KQ+ + F+ E +
Sbjct: 15 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR---RDFLGEASIM 71
Query: 100 SNVRHRNLIKIITVCSSIDFKGVDFKA----LIYEYMKCGSSEDWMHQSNDKLEAGNL-G 154
H N+I++ +GV K+ ++ E M+ GS + ++ + + + L G
Sbjct: 72 GQFDHPNIIRL---------EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG 122
Query: 155 LIQRLNLLKLEMIDVG-------------DNQLIGKFPDFIANFSALEAIDISANMLGGR 201
+++ + + D+G ++ L+ K DF + + + + GG+
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 202 IPDSLCQLRSLNYLSISENNFSCKLPLSIWNISS 235
IP ++ Y + + + +W + S
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKS---FVTECEALSNVRHRN 106
+ +G G FG+V + +TG VA+K +Q+ + K+ + E + + + H N
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIK--QCRQELSPKNRERWCLEIQIMKKLNHPN 74
Query: 107 LIKIITVCSSID-FKGVDFKALIYEYMKCGSSEDWMHQ 143
++ V + D L EY + G +++Q
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ 112
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 39 SYADLSKAT-NNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVM-NLKQKGAAKS 91
S +DL + N + +G G+FG VY+G++ + VAVK + + +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 92 FVTECEALSNVRHRNLIKIITV 113
F+ E +S H+N+++ I V
Sbjct: 80 FLMEALIISKFNHQNIVRCIGV 101
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 41 ADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEA 98
AD N+ IG+G+F V + TG VAVK+++ Q + + E
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRI 66
Query: 99 LSNVRHRNLIKIITVCSS 116
+ H N++K+ V +
Sbjct: 67 XKVLNHPNIVKLFEVIET 84
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 39 SYADLSKAT-NNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVM-NLKQKGAAKS 91
S +DL + N + +G G+FG VY+G++ + VAVK + + +
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 92 FVTECEALSNVRHRNLIKIITV 113
F+ E +S H+N+++ I V
Sbjct: 97 FLMEALIISKFNHQNIVRCIGV 118
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 39 SYADLSKAT-NNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVM-NLKQKGAAKS 91
S +DL + N + +G G+FG VY+G++ + VAVK + + +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 92 FVTECEALSNVRHRNLIKIITV 113
F+ E +S H+N+++ I V
Sbjct: 81 FLMEALIISKFNHQNIVRCIGV 102
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 39 SYADLSKAT-NNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVM-NLKQKGAAKS 91
S +DL + N + +G G+FG VY+G++ + VAVK + + +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 92 FVTECEALSNVRHRNLIKIITV 113
F+ E +S H+N+++ I V
Sbjct: 81 FLMEALIISKFNHQNIVRCIGV 102
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 364 ITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLR 423
+T + + NQ+ L N+ + YNQL +L L+ L L +N L+
Sbjct: 135 LTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194
Query: 424 GTIPD 428
++PD
Sbjct: 195 -SVPD 198
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 39 SYADLSKAT-NNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVM-NLKQKGAAKS 91
S +DL + N + +G G+FG VY+G++ + VAVK + + +
Sbjct: 47 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 106
Query: 92 FVTECEALSNVRHRNLIKIITV 113
F+ E +S H+N+++ I V
Sbjct: 107 FLMEALIISKFNHQNIVRCIGV 128
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 39 SYADLSKAT-NNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVM-NLKQKGAAKS 91
S +DL + N + +G G+FG VY+G++ + VAVK + + +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 92 FVTECEALSNVRHRNLIKIITV 113
F+ E +S H+N+++ I V
Sbjct: 95 FLMEALIISKFNHQNIVRCIGV 116
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 31 MEQQFPMVSYADLSKA----TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMN--LK 84
M Q+ P +L+K + + +G G++G V +TG VAVK ++ +
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQ 72
Query: 85 QKGAAKSFVTECEALSNVRHRNLIKIITV 113
AK E L +++H N+I ++ V
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDV 101
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Query: 44 SKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVT------ECE 97
K + + +G G F V K + TG A K + +Q A++ V+ E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 98 ALSNVRHRNLIKIITV 113
L V H N+I + V
Sbjct: 68 ILRQVLHHNVITLHDV 83
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Query: 44 SKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVT------ECE 97
K + + +G G F V K + TG A K + +Q A++ V+ E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 98 ALSNVRHRNLIKIITV 113
L V H N+I + V
Sbjct: 68 ILRQVLHHNVITLHDV 83
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 39 SYADLSKAT-NNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVM-NLKQKGAAKS 91
S +DL + N + +G G+FG VY+G++ + VAVK + + +
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 92 FVTECEALSNVRHRNLIKIITV 113
F+ E +S H+N+++ I V
Sbjct: 87 FLMEALIISKFNHQNIVRCIGV 108
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Query: 44 SKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVT------ECE 97
K + + +G G F V K + TG A K + +Q A++ V+ E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 98 ALSNVRHRNLIKIITV 113
L V H N+I + V
Sbjct: 68 ILRQVLHHNVITLHDV 83
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Query: 44 SKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVT------ECE 97
K + + +G G F V K + TG A K + +Q A++ V+ E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 98 ALSNVRHRNLIKIITV 113
L V H N+I + V
Sbjct: 68 ILRQVLHHNVITLHDV 83
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 39 SYADLSKAT-NNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVM-NLKQKGAAKS 91
S +DL + N + +G G+FG VY+G++ + VAVK + + +
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 92 FVTECEALSNVRHRNLIKIITV 113
F+ E +S H+N+++ I V
Sbjct: 121 FLMEALIISKFNHQNIVRCIGV 142
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Query: 44 SKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVT------ECE 97
K + + +G G F V K + TG A K + +Q A++ V+ E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 98 ALSNVRHRNLIKIITV 113
L V H N+I + V
Sbjct: 68 ILRQVLHHNVITLHDV 83
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 39 SYADLSKAT-NNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVM-NLKQKGAAKS 91
S +DL + N + +G G+FG VY+G++ + VAVK + + +
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 92 FVTECEALSNVRHRNLIKIITV 113
F+ E +S H+N+++ I V
Sbjct: 98 FLMEALIISKFNHQNIVRCIGV 119
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
IG G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 114 CS 115
+
Sbjct: 95 FT 96
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 337 SQMEMLYLNTNKF----GGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFG 392
+Q++ LYL N+ GVF R K+ + + NQ+ L N+
Sbjct: 107 TQLDKLYLGGNQLKSLPSGVFDRL-----TKLKELRLNTNQLQSIPAGAFDKLTNLQTLS 161
Query: 393 VEYNQLTGTIPH-AIGELKNLQGLALVRN 420
+ NQL ++PH A L LQ + L N
Sbjct: 162 LSTNQLQ-SVPHGAFDRLGKLQTITLFGN 189
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 337 SQMEMLYLNTNKF----GGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFG 392
+Q++ LYL N+ GVF R K+ + + NQ+ L N+
Sbjct: 107 TQLDKLYLGGNQLKSLPSGVFDRL-----TKLKELRLNTNQLQSIPAGAFDKLTNLQTLS 161
Query: 393 VEYNQLTGTIPH-AIGELKNLQGLALVRN 420
+ NQL ++PH A L LQ + L N
Sbjct: 162 LSTNQLQ-SVPHGAFDRLGKLQTITLFGN 189
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 11/57 (19%), Positives = 31/57 (54%)
Query: 55 MIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
++G+G++G VY G+ +A+K + + ++ E +++H+N+++ +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 71
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
+ N + IG GSFG +Y G G VA+K+ +K K
Sbjct: 4 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK 45
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRN 106
++ F + +G+G+ VY+ K T A+KV LK+ K TE L + H N
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKV--LKKTVDKKIVRTEIGVLLRLSHPN 109
Query: 107 LIKI 110
+IK+
Sbjct: 110 IIKL 113
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
+ N + IG GSFG +Y G G VA+K+ +K K
Sbjct: 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK 47
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK 86
+ N + IG GSFG +Y G +G VA+K+ +K K
Sbjct: 6 RVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTK 47
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 11/57 (19%), Positives = 31/57 (54%)
Query: 55 MIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKII 111
++G+G++G VY G+ +A+K + + ++ E +++H+N+++ +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 85
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 114 CS 115
+
Sbjct: 90 FT 91
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Query: 41 ADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEA 98
+D N+ IG+G+F V + TG VA+K+++ Q + + E
Sbjct: 5 SDEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI 64
Query: 99 LSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWM 141
+ + H N++K+ V + LI EY G D++
Sbjct: 65 MKILNHPNIVKLFEVIET-----EKTLYLIMEYASGGEVFDYL 102
>pdb|4EPP|A Chain A, Canonical Poly(Adp-Ribose) Glycohydrolase From Tetrahymena
Thermophila.
pdb|4EPP|B Chain B, Canonical Poly(Adp-Ribose) Glycohydrolase From Tetrahymena
Thermophila
Length = 477
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 101 NVRHRNLIKIIT--VCSSIDFKGVDFK-ALIYEYMKCGSSEDWMHQSNDKLEAGNLGLIQ 157
N+R + IK + ++DF + K +I++ + CG ED+ + +
Sbjct: 182 NIRRQEKIKCFYEYLKQALDFSEKESKEVVIFQRINCGQLEDYEN------------WVD 229
Query: 158 RLNLLKLEMIDVGDNQLIGKFP 179
+L +KL+ + + D++LI FP
Sbjct: 230 KLKAIKLKNVQLTDDKLIEDFP 251
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 114 CS 115
+
Sbjct: 95 FT 96
>pdb|4EPQ|A Chain A, Canonical Poly(Adp-Ribose) Glycohydrolase Rbpi Inhibitor
Complex From Tetrahymena Thermophila
Length = 477
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 101 NVRHRNLIKIIT--VCSSIDFKGVDFK-ALIYEYMKCGSSEDWMHQSNDKLEAGNLGLIQ 157
N+R + IK + ++DF + K +I++ + CG ED+ + +
Sbjct: 182 NIRRQEKIKCFYEYLKQALDFSEKESKEVVIFQRINCGQLEDYEN------------WVD 229
Query: 158 RLNLLKLEMIDVGDNQLIGKFP 179
+L +KL+ + + D++LI FP
Sbjct: 230 KLKAIKLKNVQLTDDKLIEDFP 251
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITV 113
+G G++G V +TG VAVK ++ + AK E L +++H N+I ++ V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,341,944
Number of Sequences: 62578
Number of extensions: 582924
Number of successful extensions: 2411
Number of sequences better than 100.0: 573
Number of HSP's better than 100.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 407
Number of HSP's that attempted gapping in prelim test: 1828
Number of HSP's gapped (non-prelim): 801
length of query: 628
length of database: 14,973,337
effective HSP length: 105
effective length of query: 523
effective length of database: 8,402,647
effective search space: 4394584381
effective search space used: 4394584381
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)