Query 042887
Match_columns 628
No_of_seqs 752 out of 4308
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 10:37:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042887.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042887hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 9.6E-54 2.1E-58 494.6 29.9 441 159-608 161-621 (968)
2 PLN00113 leucine-rich repeat r 100.0 8.4E-51 1.8E-55 470.1 30.4 427 157-595 135-585 (968)
3 KOG4194 Membrane glycoprotein 100.0 2E-44 4.3E-49 354.2 7.8 374 164-575 80-456 (873)
4 KOG4194 Membrane glycoprotein 100.0 5.4E-44 1.2E-48 351.1 7.3 396 164-596 54-454 (873)
5 KOG0472 Leucine-rich repeat pr 100.0 3.9E-42 8.4E-47 324.0 -10.5 412 157-594 63-541 (565)
6 KOG0472 Leucine-rich repeat pr 100.0 3.8E-40 8.2E-45 310.6 -14.7 429 163-615 46-547 (565)
7 KOG0444 Cytoskeletal regulator 100.0 5E-38 1.1E-42 311.3 -4.0 366 161-570 6-374 (1255)
8 KOG0618 Serine/threonine phosp 100.0 1.2E-36 2.5E-41 315.2 -3.8 403 163-595 46-490 (1081)
9 KOG0444 Cytoskeletal regulator 100.0 9.7E-36 2.1E-40 295.1 -2.9 367 185-595 6-376 (1255)
10 KOG0618 Serine/threonine phosp 100.0 4.8E-33 1E-37 288.5 -4.3 413 163-607 22-487 (1081)
11 KOG4237 Extracellular matrix p 99.9 4.8E-30 1E-34 242.3 -3.9 277 163-446 68-358 (498)
12 KOG4237 Extracellular matrix p 99.9 8.9E-29 1.9E-33 233.8 -3.3 301 167-475 51-359 (498)
13 PLN03210 Resistant to P. syrin 99.9 2.9E-24 6.2E-29 249.1 25.1 341 177-545 549-904 (1153)
14 PLN03210 Resistant to P. syrin 99.9 9.1E-24 2E-28 245.0 23.5 341 201-569 549-904 (1153)
15 PRK15387 E3 ubiquitin-protein 99.9 1.4E-22 3E-27 218.1 16.6 267 186-556 201-467 (788)
16 PRK15387 E3 ubiquitin-protein 99.9 1.4E-22 3.1E-27 218.0 16.7 265 162-506 201-465 (788)
17 PRK15370 E3 ubiquitin-protein 99.8 1.7E-20 3.8E-25 203.5 9.6 119 163-297 179-297 (754)
18 PRK15370 E3 ubiquitin-protein 99.8 2.4E-20 5.2E-25 202.4 10.6 247 186-499 178-428 (754)
19 cd00116 LRR_RI Leucine-rich re 99.8 3.8E-20 8.1E-25 187.2 2.1 88 263-350 2-94 (319)
20 KOG0617 Ras suppressor protein 99.8 4.6E-21 1E-25 161.1 -4.2 179 408-595 31-213 (264)
21 cd00116 LRR_RI Leucine-rich re 99.8 5.7E-20 1.2E-24 185.8 2.1 285 238-570 2-319 (319)
22 KOG0617 Ras suppressor protein 99.8 1.5E-20 3.2E-25 158.1 -4.9 161 159-325 30-191 (264)
23 KOG0595 Serine/threonine-prote 99.7 2.7E-17 5.9E-22 157.7 7.7 95 46-145 8-104 (429)
24 KOG0615 Serine/threonine prote 99.5 2.4E-14 5.1E-19 137.5 7.1 95 46-145 170-271 (475)
25 KOG1187 Serine/threonine prote 99.5 1.3E-13 2.9E-18 139.0 10.5 107 34-146 61-168 (361)
26 KOG0575 Polo-like serine/threo 99.5 1.4E-13 2.9E-18 139.2 8.2 101 48-154 18-121 (592)
27 KOG0593 Predicted protein kina 99.4 8.5E-14 1.8E-18 128.4 4.4 89 47-140 1-91 (396)
28 KOG0532 Leucine-rich repeat (L 99.4 1.1E-14 2.3E-19 145.2 -2.7 190 366-569 79-271 (722)
29 KOG0659 Cdk activating kinase 99.4 3.1E-13 6.7E-18 122.6 6.8 95 48-148 2-98 (318)
30 KOG0532 Leucine-rich repeat (L 99.4 6.5E-15 1.4E-19 146.8 -5.2 177 384-573 73-249 (722)
31 KOG0597 Serine-threonine prote 99.4 1.9E-13 4.1E-18 136.2 5.0 93 47-145 1-95 (808)
32 KOG0605 NDR and related serine 99.4 4.4E-13 9.6E-18 133.4 7.3 95 46-145 139-236 (550)
33 KOG0598 Ribosomal protein S6 k 99.4 3.3E-13 7.2E-18 128.6 5.9 96 47-147 24-122 (357)
34 KOG0611 Predicted serine/threo 99.4 1.2E-13 2.7E-18 131.9 2.9 94 47-145 52-148 (668)
35 KOG0581 Mitogen-activated prot 99.4 1.8E-13 3.9E-18 130.5 3.3 114 49-168 80-195 (364)
36 KOG2052 Activin A type IB rece 99.4 8.7E-13 1.9E-17 128.1 7.7 100 38-143 201-302 (513)
37 KOG0194 Protein tyrosine kinas 99.4 6.3E-13 1.4E-17 135.0 6.6 106 39-149 148-260 (474)
38 KOG1026 Nerve growth factor re 99.4 3E-13 6.5E-18 142.2 4.1 98 44-146 482-585 (774)
39 KOG0600 Cdc2-related protein k 99.4 5.6E-13 1.2E-17 131.5 5.6 100 46-149 115-216 (560)
40 KOG0196 Tyrosine kinase, EPH ( 99.4 7.3E-13 1.6E-17 136.9 5.9 98 49-151 630-731 (996)
41 COG4886 Leucine-rich repeat (L 99.3 1.4E-12 3.1E-17 135.6 7.7 178 363-552 117-295 (394)
42 PLN03150 hypothetical protein; 99.3 2.1E-12 4.6E-17 140.3 8.7 118 487-607 419-538 (623)
43 KOG0591 NIMA (never in mitosis 99.3 1.3E-13 2.8E-18 125.9 -0.8 94 47-143 18-113 (375)
44 KOG0197 Tyrosine kinases [Sign 99.3 8.7E-13 1.9E-17 131.9 3.7 97 40-143 198-294 (468)
45 KOG0663 Protein kinase PITSLRE 99.3 3.6E-13 7.9E-18 126.0 0.9 103 47-153 75-179 (419)
46 KOG0580 Serine/threonine prote 99.3 1.2E-12 2.6E-17 117.1 3.7 94 47-145 21-117 (281)
47 COG4886 Leucine-rich repeat (L 99.3 3.1E-12 6.7E-17 133.1 7.4 147 166-319 97-244 (394)
48 KOG3653 Transforming growth fa 99.3 2.1E-12 4.6E-17 126.4 5.4 93 47-145 209-303 (534)
49 KOG0192 Tyrosine kinase specif 99.3 3E-12 6.5E-17 128.2 6.3 91 47-144 40-134 (362)
50 KOG0574 STE20-like serine/thre 99.3 1.1E-13 2.3E-18 127.3 -4.1 115 47-168 32-146 (502)
51 KOG3207 Beta-tubulin folding c 99.3 6.6E-13 1.4E-17 128.7 0.8 194 157-350 116-314 (505)
52 PF14580 LRR_9: Leucine-rich r 99.3 3.2E-12 7E-17 113.5 5.0 129 182-315 15-148 (175)
53 KOG4250 TANK binding protein k 99.3 1.8E-12 3.8E-17 133.3 3.5 101 48-148 13-115 (732)
54 KOG0616 cAMP-dependent protein 99.3 4.6E-12 1E-16 116.9 5.7 94 47-145 43-139 (355)
55 KOG0583 Serine/threonine prote 99.3 7.8E-12 1.7E-16 126.5 7.9 99 46-150 15-119 (370)
56 KOG0662 Cyclin-dependent kinas 99.3 1.5E-12 3.2E-17 110.9 2.2 99 49-153 3-103 (292)
57 KOG4278 Protein tyrosine kinas 99.3 2.6E-12 5.6E-17 129.3 3.9 101 40-146 259-359 (1157)
58 KOG1909 Ran GTPase-activating 99.3 5.3E-13 1.1E-17 125.9 -1.5 133 410-546 157-310 (382)
59 KOG0585 Ca2+/calmodulin-depend 99.2 1.3E-11 2.8E-16 121.1 7.4 94 44-140 93-200 (576)
60 KOG0661 MAPK related serine/th 99.2 1.5E-12 3.2E-17 127.6 0.8 106 46-156 8-115 (538)
61 KOG0607 MAP kinase-interacting 99.2 7.4E-12 1.6E-16 116.5 5.1 87 54-145 84-171 (463)
62 KOG0032 Ca2+/calmodulin-depend 99.2 1.5E-11 3.3E-16 124.3 7.5 94 46-144 33-130 (382)
63 PLN03150 hypothetical protein; 99.2 2.3E-11 5.1E-16 132.2 9.3 107 164-270 420-526 (623)
64 KOG1909 Ran GTPase-activating 99.2 1.4E-12 3E-17 123.2 -0.8 68 180-247 24-105 (382)
65 KOG0586 Serine/threonine prote 99.2 1.9E-11 4.1E-16 124.0 7.2 100 44-148 52-153 (596)
66 PF14580 LRR_9: Leucine-rich r 99.2 1.6E-11 3.4E-16 109.1 5.5 126 432-566 17-148 (175)
67 KOG1094 Discoidin domain recep 99.2 1.3E-11 2.7E-16 123.8 4.8 96 44-145 534-630 (807)
68 KOG0610 Putative serine/threon 99.2 1.8E-11 4E-16 118.1 5.7 97 48-149 77-176 (459)
69 KOG1259 Nischarin, modulator o 99.2 6.9E-12 1.5E-16 115.7 2.6 136 430-575 280-416 (490)
70 cd05599 STKc_NDR_like Catalyti 99.2 3.5E-11 7.5E-16 124.0 8.1 92 48-144 1-95 (364)
71 KOG1259 Nischarin, modulator o 99.2 4.6E-12 9.9E-17 116.9 1.2 130 385-524 283-413 (490)
72 cd05612 STKc_PRKX_like Catalyt 99.2 4.6E-11 1E-15 118.9 8.2 93 48-145 1-96 (291)
73 cd05629 STKc_NDR_like_fungal C 99.2 4.8E-11 1E-15 123.5 8.6 92 48-144 1-95 (377)
74 KOG0198 MEKK and related serin 99.2 4.9E-11 1.1E-15 115.8 7.9 104 47-153 16-119 (313)
75 KOG0193 Serine/threonine prote 99.2 1.9E-11 4.1E-16 123.5 5.1 109 33-150 377-487 (678)
76 cd05626 STKc_LATS2 Catalytic d 99.2 5.6E-11 1.2E-15 123.1 8.6 91 49-144 2-95 (381)
77 KOG0588 Serine/threonine prote 99.2 2.6E-11 5.5E-16 123.7 5.7 96 47-147 11-109 (786)
78 cd05598 STKc_LATS Catalytic do 99.2 6.4E-11 1.4E-15 122.6 8.6 92 48-144 1-95 (376)
79 PTZ00263 protein kinase A cata 99.2 6.9E-11 1.5E-15 119.8 8.1 93 47-144 17-112 (329)
80 KOG3207 Beta-tubulin folding c 99.2 4.4E-12 9.5E-17 123.1 -0.7 232 167-423 98-339 (505)
81 cd05600 STKc_Sid2p_Dbf2p Catal 99.1 8.6E-11 1.9E-15 119.4 8.5 92 48-144 1-95 (333)
82 cd05628 STKc_NDR1 Catalytic do 99.1 9E-11 2E-15 120.7 8.6 92 48-144 1-95 (363)
83 cd05597 STKc_DMPK_like Catalyt 99.1 1E-10 2.2E-15 118.7 8.6 93 48-145 1-96 (331)
84 KOG4717 Serine/threonine prote 99.1 2.6E-11 5.7E-16 119.7 4.1 98 46-148 16-115 (864)
85 cd05105 PTKc_PDGFR_alpha Catal 99.1 5.3E-11 1.1E-15 123.2 6.7 100 42-146 31-137 (400)
86 KOG1989 ARK protein kinase fam 99.1 5.3E-11 1.1E-15 126.0 6.6 98 47-144 36-136 (738)
87 cd05625 STKc_LATS1 Catalytic d 99.1 8.7E-11 1.9E-15 121.8 8.2 91 49-144 2-95 (382)
88 KOG0592 3-phosphoinositide-dep 99.1 3.6E-11 7.8E-16 119.9 4.7 96 45-145 70-169 (604)
89 KOG1095 Protein tyrosine kinas 99.1 5.5E-11 1.2E-15 130.1 6.4 94 47-145 691-790 (1025)
90 cd05104 PTKc_Kit Catalytic dom 99.1 6.1E-11 1.3E-15 122.4 6.5 99 42-145 29-134 (375)
91 KOG0612 Rho-associated, coiled 99.1 8.9E-12 1.9E-16 134.1 0.2 109 40-154 67-178 (1317)
92 cd05102 PTKc_VEGFR3 Catalytic 99.1 4.6E-11 1E-15 121.7 5.5 98 44-145 3-107 (338)
93 cd06650 PKc_MEK1 Catalytic dom 99.1 1.6E-10 3.5E-15 117.3 9.3 93 47-144 4-97 (333)
94 KOG0589 Serine/threonine prote 99.1 4.8E-11 1E-15 119.1 5.2 94 47-145 3-99 (426)
95 KOG0582 Ste20-like serine/thre 99.1 9.7E-11 2.1E-15 114.2 7.0 97 43-144 21-118 (516)
96 cd06649 PKc_MEK2 Catalytic dom 99.1 1.7E-10 3.6E-15 117.1 9.2 93 47-144 4-97 (331)
97 KOG0578 p21-activated serine/t 99.1 1.7E-11 3.6E-16 123.3 1.7 116 46-168 271-386 (550)
98 cd05064 PTKc_EphR_A10 Catalyti 99.1 1.2E-10 2.7E-15 114.2 6.9 94 47-145 4-101 (266)
99 cd05621 STKc_ROCK2 Catalytic d 99.1 1.3E-10 2.9E-15 119.4 7.5 93 46-143 41-136 (370)
100 cd05624 STKc_MRCK_beta Catalyt 99.1 1.9E-10 4.1E-15 116.7 8.4 93 48-145 1-96 (331)
101 KOG0201 Serine/threonine prote 99.1 6.4E-11 1.4E-15 115.3 4.4 93 48-145 13-106 (467)
102 cd06611 STKc_SLK_like Catalyti 99.1 1.4E-10 2.9E-15 114.9 6.6 96 46-146 3-98 (280)
103 KOG0694 Serine/threonine prote 99.1 1.6E-10 3.5E-15 118.8 7.1 92 45-141 365-460 (694)
104 cd05622 STKc_ROCK1 Catalytic d 99.1 1.8E-10 3.8E-15 118.7 7.6 99 40-143 35-136 (371)
105 cd05627 STKc_NDR2 Catalytic do 99.1 2.5E-10 5.4E-15 117.3 8.6 92 48-144 1-95 (360)
106 cd05596 STKc_ROCK Catalytic do 99.1 1.4E-10 3E-15 119.4 6.6 93 46-143 41-136 (370)
107 cd06646 STKc_MAP4K5 Catalytic 99.1 4E-10 8.6E-15 110.7 9.5 93 47-144 8-100 (267)
108 cd05107 PTKc_PDGFR_beta Cataly 99.1 1.4E-10 2.9E-15 120.1 6.3 99 42-145 31-136 (401)
109 PTZ00426 cAMP-dependent protei 99.1 2.3E-10 5E-15 116.3 7.7 94 46-144 28-125 (340)
110 cd05601 STKc_CRIK Catalytic do 99.1 3E-10 6.5E-15 115.3 8.6 96 48-148 1-99 (330)
111 KOG0033 Ca2+/calmodulin-depend 99.1 3.8E-12 8.3E-17 114.0 -4.7 91 47-142 10-102 (355)
112 cd05096 PTKc_DDR1 Catalytic do 99.1 2.7E-10 6E-15 114.2 7.7 93 47-144 4-113 (304)
113 cd05573 STKc_ROCK_NDR_like Cat 99.1 3.2E-10 6.9E-15 116.2 8.4 92 48-144 1-95 (350)
114 KOG0531 Protein phosphatase 1, 99.1 1.9E-11 4.1E-16 127.3 -1.0 85 231-320 69-153 (414)
115 cd07871 STKc_PCTAIRE3 Catalyti 99.1 4.6E-10 1E-14 111.5 9.0 93 47-145 4-97 (288)
116 cd06615 PKc_MEK Catalytic doma 99.1 4.7E-10 1E-14 112.6 9.0 92 48-144 1-93 (308)
117 PRK13184 pknD serine/threonine 99.0 4.5E-10 9.8E-15 123.8 9.1 91 48-143 2-95 (932)
118 cd05571 STKc_PKB Catalytic dom 99.0 4.8E-10 1.1E-14 113.3 8.7 86 54-144 1-89 (323)
119 cd05595 STKc_PKB_beta Catalyti 99.0 4.9E-10 1.1E-14 113.3 8.7 86 54-144 1-89 (323)
120 cd05631 STKc_GRK4 Catalytic do 99.0 4.6E-10 1E-14 111.4 8.3 90 49-143 1-93 (285)
121 cd05605 STKc_GRK4_like Catalyt 99.0 5.2E-10 1.1E-14 111.0 8.6 91 49-144 1-94 (285)
122 KOG0531 Protein phosphatase 1, 99.0 1.9E-11 4.2E-16 127.2 -1.7 247 280-575 69-322 (414)
123 KOG0660 Mitogen-activated prot 99.0 2.3E-10 5E-15 109.1 5.6 99 46-145 20-120 (359)
124 cd05103 PTKc_VEGFR2 Catalytic 99.0 3E-10 6.4E-15 115.9 6.9 96 46-145 5-107 (343)
125 KOG2345 Serine/threonine prote 99.0 1.1E-10 2.5E-15 105.1 3.3 98 47-144 20-117 (302)
126 cd07869 STKc_PFTAIRE1 Catalyti 99.0 6E-10 1.3E-14 111.6 8.8 93 47-145 4-97 (303)
127 cd05623 STKc_MRCK_alpha Cataly 99.0 5.3E-10 1.2E-14 113.5 8.3 93 48-145 1-96 (332)
128 PLN00034 mitogen-activated pro 99.0 4E-10 8.7E-15 115.5 7.4 89 47-140 73-162 (353)
129 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.0 6.1E-10 1.3E-14 110.5 8.3 95 48-145 4-102 (284)
130 KOG0577 Serine/threonine prote 99.0 2.9E-11 6.2E-16 121.3 -1.2 120 49-175 27-149 (948)
131 cd05106 PTKc_CSF-1R Catalytic 99.0 2.6E-10 5.7E-15 117.5 5.9 99 42-145 32-137 (374)
132 cd05585 STKc_YPK1_like Catalyt 99.0 6.7E-10 1.5E-14 111.7 8.4 84 56-144 1-87 (312)
133 cd06645 STKc_MAP4K3 Catalytic 99.0 3.9E-10 8.4E-15 110.8 6.4 93 47-144 8-100 (267)
134 KOG0594 Protein kinase PCTAIRE 99.0 3.9E-10 8.6E-15 107.7 6.1 98 47-145 10-111 (323)
135 cd06638 STKc_myosinIIIA Cataly 99.0 6.4E-10 1.4E-14 110.4 8.0 104 38-142 8-112 (286)
136 cd05593 STKc_PKB_gamma Catalyt 99.0 9E-10 2E-14 111.5 9.0 86 54-144 1-89 (328)
137 KOG4257 Focal adhesion tyrosin 99.0 6.5E-11 1.4E-15 119.6 0.5 102 46-153 387-493 (974)
138 KOG0579 Ste20-like serine/thre 99.0 9.3E-12 2E-16 125.6 -5.5 118 46-168 30-147 (1187)
139 cd07848 STKc_CDKL5 Catalytic d 99.0 8.4E-10 1.8E-14 109.6 8.4 89 48-141 1-91 (287)
140 PF13855 LRR_8: Leucine rich r 99.0 1.9E-10 4E-15 84.0 2.7 60 511-570 2-61 (61)
141 PTZ00266 NIMA-related protein 99.0 6.7E-10 1.4E-14 123.1 8.0 99 42-143 7-107 (1021)
142 KOG0690 Serine/threonine prote 99.0 1.5E-10 3.2E-15 108.1 2.4 96 45-145 165-263 (516)
143 cd06656 STKc_PAK3 Catalytic do 99.0 1.1E-09 2.5E-14 109.2 9.0 92 47-143 18-109 (297)
144 cd07859 STKc_TDY_MAPK_plant Ca 99.0 1.2E-09 2.5E-14 111.5 9.2 95 49-144 1-97 (338)
145 cd06622 PKc_MAPKK_PBS2_like Ca 99.0 7.3E-10 1.6E-14 110.0 7.5 92 48-144 1-93 (286)
146 cd06644 STKc_STK10_LOK Catalyt 99.0 7E-10 1.5E-14 110.5 7.3 95 46-145 10-104 (292)
147 cd05148 PTKc_Srm_Brk Catalytic 99.0 3.3E-10 7.2E-15 110.8 4.8 93 46-144 4-96 (261)
148 KOG0587 Traf2- and Nck-interac 99.0 7.4E-10 1.6E-14 116.7 7.4 116 38-154 9-126 (953)
149 cd05589 STKc_PKN Catalytic dom 99.0 9.5E-10 2.1E-14 111.3 8.0 89 50-143 1-95 (324)
150 PF13855 LRR_8: Leucine rich r 99.0 3.3E-10 7.1E-15 82.7 3.4 59 163-221 2-60 (61)
151 cd05588 STKc_aPKC Catalytic do 99.0 1.3E-09 2.8E-14 110.5 8.9 86 54-144 1-90 (329)
152 cd06630 STKc_MEKK1 Catalytic d 99.0 1.4E-09 3E-14 106.8 8.8 91 49-144 1-97 (268)
153 cd05594 STKc_PKB_alpha Catalyt 99.0 1.3E-09 2.9E-14 110.3 8.8 86 54-144 1-89 (325)
154 KOG0199 ACK and related non-re 99.0 1.9E-10 4.1E-15 117.8 2.6 90 48-143 110-203 (1039)
155 cd06654 STKc_PAK1 Catalytic do 99.0 1.7E-09 3.8E-14 107.9 9.3 92 47-143 19-110 (296)
156 cd06620 PKc_MAPKK_Byr1_like Ca 99.0 9E-10 1.9E-14 109.3 7.1 93 47-144 4-97 (284)
157 cd06624 STKc_ASK Catalytic dom 99.0 1.3E-09 2.8E-14 107.1 8.2 93 47-144 7-99 (268)
158 cd05580 STKc_PKA Catalytic dom 99.0 1.4E-09 3.1E-14 108.2 8.5 92 48-144 1-95 (290)
159 PRK09188 serine/threonine prot 99.0 1.2E-09 2.5E-14 109.7 7.8 88 43-138 13-106 (365)
160 cd06613 STKc_MAP4K3_like Catal 99.0 1.4E-09 3E-14 106.5 8.1 94 47-145 2-95 (262)
161 KOG0576 Mitogen-activated prot 99.0 6.1E-11 1.3E-15 120.9 -1.6 93 45-142 12-104 (829)
162 cd05084 PTKc_Fes Catalytic dom 99.0 1.3E-09 2.9E-14 105.9 7.8 87 54-145 1-88 (252)
163 cd05578 STKc_Yank1 Catalytic d 99.0 1.3E-09 2.7E-14 106.5 7.5 91 49-144 1-94 (258)
164 cd06652 STKc_MEKK2 Catalytic d 99.0 2.1E-09 4.5E-14 105.5 9.0 94 48-144 2-100 (265)
165 cd06619 PKc_MKK5 Catalytic dom 99.0 2.3E-09 5.1E-14 106.0 9.5 88 48-140 1-89 (279)
166 cd05587 STKc_cPKC Catalytic do 99.0 1.6E-09 3.6E-14 109.5 8.5 91 49-144 1-95 (324)
167 PTZ00267 NIMA-related protein 99.0 1.1E-09 2.4E-14 116.6 7.5 91 48-143 67-158 (478)
168 KOG1025 Epidermal growth facto 98.9 2.6E-10 5.6E-15 119.0 2.2 93 51-149 699-796 (1177)
169 PF07714 Pkinase_Tyr: Protein 98.9 1.1E-09 2.5E-14 106.9 6.6 88 52-144 3-95 (259)
170 cd05114 PTKc_Tec_Rlk Catalytic 98.9 1.5E-09 3.3E-14 105.8 7.4 91 48-145 4-94 (256)
171 cd08224 STKc_Nek6_Nek7 Catalyt 98.9 2.2E-09 4.8E-14 105.3 8.7 91 48-143 2-95 (267)
172 cd05033 PTKc_EphR Catalytic do 98.9 1.7E-09 3.6E-14 106.2 7.8 94 48-146 4-101 (266)
173 cd05065 PTKc_EphR_B Catalytic 98.9 1.3E-09 2.9E-14 107.1 7.1 93 48-145 4-100 (269)
174 cd08228 STKc_Nek6 Catalytic do 98.9 2E-09 4.4E-14 105.6 8.4 91 48-143 2-95 (267)
175 cd06647 STKc_PAK_I Catalytic d 98.9 2.4E-09 5.3E-14 106.6 8.9 92 47-143 18-109 (293)
176 KOG4658 Apoptotic ATPase [Sign 98.9 3.2E-10 6.9E-15 126.0 2.6 131 160-294 521-653 (889)
177 cd05630 STKc_GRK6 Catalytic do 98.9 2.4E-09 5.2E-14 106.2 8.6 90 49-143 1-93 (285)
178 cd08219 STKc_Nek3 Catalytic do 98.9 2.6E-09 5.6E-14 104.1 8.7 90 49-143 1-91 (255)
179 cd05066 PTKc_EphR_A Catalytic 98.9 1.7E-09 3.6E-14 106.3 7.3 93 48-145 4-100 (267)
180 cd07872 STKc_PCTAIRE2 Catalyti 98.9 2.4E-09 5.1E-14 107.7 8.5 93 47-145 5-98 (309)
181 PHA02988 hypothetical protein; 98.9 2.3E-09 4.9E-14 106.2 8.2 88 54-144 26-116 (283)
182 cd05608 STKc_GRK1 Catalytic do 98.9 2.1E-09 4.6E-14 106.3 8.0 83 56-143 1-86 (280)
183 cd05582 STKc_RSK_N N-terminal 98.9 2.5E-09 5.3E-14 108.0 8.6 86 54-144 2-92 (318)
184 cd05619 STKc_nPKC_theta Cataly 98.9 2.5E-09 5.5E-14 107.6 8.7 86 54-144 1-90 (316)
185 KOG4658 Apoptotic ATPase [Sign 98.9 1E-09 2.2E-14 122.1 6.2 207 184-399 521-730 (889)
186 cd05632 STKc_GRK5 Catalytic do 98.9 2.5E-09 5.4E-14 106.1 8.4 90 50-144 2-94 (285)
187 cd05590 STKc_nPKC_eta Catalyti 98.9 2.4E-09 5.3E-14 108.0 8.5 86 54-144 1-90 (320)
188 cd05615 STKc_cPKC_alpha Cataly 98.9 2.5E-09 5.5E-14 108.0 8.6 91 49-144 1-95 (323)
189 cd08221 STKc_Nek9 Catalytic do 98.9 2.7E-09 5.9E-14 104.0 8.5 91 49-144 1-93 (256)
190 cd06621 PKc_MAPKK_Pek1_like Ca 98.9 3E-09 6.4E-14 105.7 8.8 93 48-143 1-94 (287)
191 cd06632 STKc_MEKK1_plant Catal 98.9 3.4E-09 7.3E-14 103.4 9.1 91 49-144 1-96 (258)
192 cd05584 STKc_p70S6K Catalytic 98.9 2.7E-09 5.8E-14 107.9 8.5 87 54-145 2-95 (323)
193 cd05618 STKc_aPKC_iota Catalyt 98.9 3E-09 6.6E-14 107.8 8.9 86 54-144 1-90 (329)
194 cd05061 PTKc_InsR Catalytic do 98.9 1.4E-09 3.1E-14 108.1 6.4 96 45-145 3-104 (288)
195 cd05592 STKc_nPKC_theta_delta 98.9 2.9E-09 6.3E-14 107.2 8.7 86 54-144 1-90 (316)
196 cd05049 PTKc_Trk Catalytic dom 98.9 1.7E-09 3.6E-14 107.1 6.7 94 47-145 4-103 (280)
197 cd08529 STKc_FA2-like Catalyti 98.9 3.2E-09 7E-14 103.4 8.6 91 49-144 1-93 (256)
198 KOG0658 Glycogen synthase kina 98.9 9.1E-10 2E-14 105.3 4.5 91 48-143 24-114 (364)
199 cd05591 STKc_nPKC_epsilon Cata 98.9 2.9E-09 6.3E-14 107.6 8.5 86 54-144 1-90 (321)
200 cd06625 STKc_MEKK3_like Cataly 98.9 3.9E-09 8.4E-14 103.3 9.1 92 48-144 2-98 (263)
201 cd07873 STKc_PCTAIRE1 Catalyti 98.9 3.2E-09 6.9E-14 106.3 8.6 93 47-145 5-98 (301)
202 cd06639 STKc_myosinIIIB Cataly 98.9 2.9E-09 6.3E-14 106.0 8.2 105 38-143 12-117 (291)
203 PF00069 Pkinase: Protein kina 98.9 2.5E-09 5.4E-14 104.5 7.5 88 50-142 1-90 (260)
204 cd06641 STKc_MST3 Catalytic do 98.9 3.5E-09 7.5E-14 104.6 8.6 91 48-143 4-95 (277)
205 cd05076 PTK_Tyk2_rpt1 Pseudoki 98.9 1.5E-09 3.3E-14 107.0 6.0 87 55-146 2-112 (274)
206 cd05097 PTKc_DDR_like Catalyti 98.9 1.7E-09 3.7E-14 107.9 6.4 93 47-144 4-111 (295)
207 cd06643 STKc_SLK Catalytic dom 98.9 2.9E-09 6.4E-14 105.4 8.0 91 49-144 6-96 (282)
208 cd05609 STKc_MAST Catalytic do 98.9 3.6E-09 7.7E-14 106.1 8.6 92 48-144 1-95 (305)
209 cd05570 STKc_PKC Catalytic dom 98.9 3.7E-09 7.9E-14 106.7 8.7 86 54-144 1-90 (318)
210 cd05108 PTKc_EGFR Catalytic do 98.9 2.9E-09 6.2E-14 107.4 7.9 92 48-145 7-103 (316)
211 cd05607 STKc_GRK7 Catalytic do 98.9 3.4E-09 7.4E-14 104.6 8.2 84 56-144 1-87 (277)
212 cd05062 PTKc_IGF-1R Catalytic 98.9 1.8E-09 3.8E-14 106.7 6.2 95 46-145 4-104 (277)
213 cd08227 PK_STRAD_alpha Pseudok 98.9 3.1E-09 6.8E-14 107.7 8.1 88 52-144 2-93 (327)
214 cd07832 STKc_CCRK Catalytic do 98.9 3.9E-09 8.4E-14 104.8 8.6 91 49-145 1-93 (286)
215 cd05052 PTKc_Abl Catalytic dom 98.9 1.7E-09 3.6E-14 106.0 5.9 92 47-144 5-96 (263)
216 cd06609 STKc_MST3_like Catalyt 98.9 4.2E-09 9E-14 103.9 8.7 92 48-144 1-93 (274)
217 cd06640 STKc_MST4 Catalytic do 98.9 4E-09 8.7E-14 104.2 8.5 91 48-143 4-95 (277)
218 cd06655 STKc_PAK2 Catalytic do 98.9 3.6E-09 7.9E-14 105.5 8.3 92 47-143 18-109 (296)
219 cd05604 STKc_SGK3 Catalytic do 98.9 4.1E-09 8.9E-14 106.7 8.7 86 54-144 1-90 (325)
220 cd05575 STKc_SGK Catalytic dom 98.9 4.1E-09 8.9E-14 106.6 8.7 86 54-144 1-90 (323)
221 cd07844 STKc_PCTAIRE_like Cata 98.9 4E-09 8.7E-14 105.0 8.5 93 47-145 4-97 (291)
222 cd07846 STKc_CDKL2_3 Catalytic 98.9 3.1E-09 6.6E-14 105.5 7.5 91 48-143 1-93 (286)
223 cd07853 STKc_NLK Catalytic dom 98.9 5E-09 1.1E-13 108.2 9.3 94 49-143 1-96 (372)
224 cd05610 STKc_MASTL Catalytic d 98.9 3.2E-09 6.9E-14 117.3 8.3 93 47-144 3-98 (669)
225 cd05620 STKc_nPKC_delta Cataly 98.9 4.2E-09 9.1E-14 106.1 8.5 86 54-144 1-90 (316)
226 cd08220 STKc_Nek8 Catalytic do 98.9 4.6E-09 1E-13 102.3 8.6 91 49-144 1-93 (256)
227 cd06629 STKc_MAPKKK_Bck1_like 98.9 3.7E-09 8E-14 104.1 8.0 91 49-144 2-102 (272)
228 cd06653 STKc_MEKK3_like_1 Cata 98.9 5.8E-09 1.3E-13 102.2 9.3 94 48-144 2-100 (264)
229 cd08218 STKc_Nek1 Catalytic do 98.9 5E-09 1.1E-13 102.1 8.7 90 49-143 1-92 (256)
230 cd05603 STKc_SGK2 Catalytic do 98.9 4.6E-09 1E-13 106.1 8.7 86 54-144 1-90 (321)
231 cd06628 STKc_MAPKKK_Byr2_like 98.9 5.3E-09 1.2E-13 102.6 8.9 91 49-144 1-100 (267)
232 cd06651 STKc_MEKK3 Catalytic d 98.9 6.9E-09 1.5E-13 101.8 9.7 94 48-144 2-100 (266)
233 cd05039 PTKc_Csk_like Catalyti 98.9 4.3E-09 9.3E-14 102.6 8.1 91 47-145 5-95 (256)
234 cd05616 STKc_cPKC_beta Catalyt 98.9 4.6E-09 1E-13 106.2 8.6 91 49-144 1-95 (323)
235 cd05088 PTKc_Tie2 Catalytic do 98.9 3.4E-09 7.4E-14 106.1 7.6 94 47-145 6-103 (303)
236 cd06626 STKc_MEKK4 Catalytic d 98.9 5.8E-09 1.3E-13 102.1 9.0 91 49-144 1-93 (264)
237 cd06642 STKc_STK25-YSK1 Cataly 98.9 2.2E-09 4.8E-14 106.0 5.9 91 48-143 4-95 (277)
238 cd05046 PTK_CCK4 Pseudokinase 98.9 3.5E-09 7.6E-14 104.4 7.3 94 47-145 4-103 (275)
239 KOG4279 Serine/threonine prote 98.9 7.7E-10 1.7E-14 113.3 2.5 89 55-148 582-670 (1226)
240 cd05090 PTKc_Ror1 Catalytic do 98.9 3.1E-09 6.7E-14 105.3 6.9 92 48-144 5-101 (283)
241 cd05067 PTKc_Lck_Blk Catalytic 98.9 3.3E-09 7.2E-14 103.7 7.0 91 46-144 4-94 (260)
242 cd05093 PTKc_TrkB Catalytic do 98.9 3.9E-09 8.5E-14 104.9 7.5 94 47-145 4-102 (288)
243 cd05072 PTKc_Lyn Catalytic dom 98.9 2.5E-09 5.4E-14 104.6 6.0 92 46-144 4-95 (261)
244 cd05050 PTKc_Musk Catalytic do 98.9 3.2E-09 6.9E-14 105.5 6.9 94 47-145 4-103 (288)
245 KOG1151 Tousled-like protein k 98.9 3.3E-10 7.2E-15 110.0 -0.2 100 42-145 457-563 (775)
246 cd05054 PTKc_VEGFR Catalytic d 98.9 2.1E-09 4.5E-14 109.2 5.6 99 43-145 2-107 (337)
247 cd05068 PTKc_Frk_like Catalyti 98.9 2.8E-09 6.1E-14 104.2 6.3 92 46-144 4-95 (261)
248 cd08229 STKc_Nek7 Catalytic do 98.9 4.6E-09 9.9E-14 103.1 7.8 91 48-143 2-95 (267)
249 cd06623 PKc_MAPKK_plant_like C 98.9 6.9E-09 1.5E-13 101.6 9.0 92 48-144 1-93 (264)
250 KOG4236 Serine/threonine prote 98.9 3E-09 6.6E-14 105.7 6.2 91 53-149 569-662 (888)
251 cd06631 STKc_YSK4 Catalytic do 98.9 7.8E-09 1.7E-13 101.4 9.3 90 49-144 1-96 (265)
252 cd05078 PTK_Jak2_Jak3_rpt1 Pse 98.9 1.3E-09 2.7E-14 106.5 3.7 88 54-146 1-95 (258)
253 cd05614 STKc_MSK2_N N-terminal 98.9 5.8E-09 1.3E-13 106.0 8.6 91 49-144 1-99 (332)
254 cd05574 STKc_phototropin_like 98.9 6.7E-09 1.5E-13 104.7 9.0 92 48-144 1-95 (316)
255 cd06612 STKc_MST1_2 Catalytic 98.9 5E-09 1.1E-13 102.1 7.7 92 47-145 2-93 (256)
256 cd05034 PTKc_Src_like Catalyti 98.9 4.5E-09 9.8E-14 102.8 7.4 93 45-144 3-95 (261)
257 cd05095 PTKc_DDR2 Catalytic do 98.9 3E-09 6.6E-14 106.2 6.3 94 47-145 4-114 (296)
258 cd08217 STKc_Nek2 Catalytic do 98.9 7.6E-09 1.7E-13 101.3 9.0 93 49-144 1-95 (265)
259 cd05113 PTKc_Btk_Bmx Catalytic 98.9 4E-09 8.7E-14 102.8 6.8 91 48-145 4-94 (256)
260 cd05079 PTKc_Jak1_rpt2 Catalyt 98.8 6.2E-09 1.3E-13 103.2 8.2 93 49-144 5-102 (284)
261 cd07847 STKc_CDKL1_4 Catalytic 98.8 6.8E-09 1.5E-13 103.0 8.5 91 48-143 1-93 (286)
262 cd05032 PTKc_InsR_like Catalyt 98.8 3.2E-09 7E-14 104.8 6.1 95 46-145 4-104 (277)
263 cd07841 STKc_CDK7 Catalytic do 98.8 7.5E-09 1.6E-13 103.4 8.8 91 49-145 1-96 (298)
264 PTZ00283 serine/threonine prot 98.8 6.3E-09 1.4E-13 111.0 8.4 99 46-144 30-133 (496)
265 cd08225 STKc_Nek5 Catalytic do 98.8 7.2E-09 1.6E-13 101.1 8.2 91 49-144 1-93 (257)
266 cd05063 PTKc_EphR_A2 Catalytic 98.8 5.4E-09 1.2E-13 102.7 7.3 93 48-145 5-101 (268)
267 cd05036 PTKc_ALK_LTK Catalytic 98.8 4.3E-09 9.4E-14 103.9 6.7 94 47-145 5-104 (277)
268 cd07862 STKc_CDK6 Catalytic do 98.8 1.2E-08 2.5E-13 101.6 9.8 95 48-143 1-101 (290)
269 cd05617 STKc_aPKC_zeta Catalyt 98.8 7.5E-09 1.6E-13 104.8 8.5 86 54-144 1-90 (327)
270 KOG1152 Signal transduction se 98.8 3.4E-09 7.3E-14 106.7 5.6 94 47-145 560-665 (772)
271 cd05071 PTKc_Src Catalytic dom 98.8 3.4E-09 7.4E-14 103.7 5.7 91 46-144 4-94 (262)
272 cd05051 PTKc_DDR Catalytic dom 98.8 6E-09 1.3E-13 104.0 7.6 94 47-145 4-114 (296)
273 cd05038 PTKc_Jak_rpt2 Catalyti 98.8 8.6E-09 1.9E-13 102.1 8.7 95 48-145 4-103 (284)
274 PHA03212 serine/threonine kina 98.8 5.9E-09 1.3E-13 107.9 7.7 86 47-144 91-176 (391)
275 cd06637 STKc_TNIK Catalytic do 98.8 8.9E-09 1.9E-13 101.4 8.7 98 46-144 4-103 (272)
276 cd05059 PTKc_Tec_like Catalyti 98.8 6.5E-09 1.4E-13 101.3 7.6 91 48-145 4-94 (256)
277 cd05048 PTKc_Ror Catalytic Dom 98.8 5.2E-09 1.1E-13 103.7 7.0 93 48-145 5-103 (283)
278 cd06605 PKc_MAPKK Catalytic do 98.8 7.3E-09 1.6E-13 101.5 7.8 92 48-144 1-93 (265)
279 cd05053 PTKc_FGFR Catalytic do 98.8 4.4E-09 9.5E-14 104.8 6.2 98 43-145 7-111 (293)
280 cd05602 STKc_SGK1 Catalytic do 98.8 9.9E-09 2.1E-13 103.9 8.7 87 54-145 1-91 (325)
281 KOG1859 Leucine-rich repeat pr 98.8 1.4E-10 3.1E-15 119.2 -4.6 180 403-596 102-294 (1096)
282 cd05055 PTKc_PDGFR Catalytic d 98.8 5.8E-09 1.2E-13 104.4 6.8 96 44-144 31-133 (302)
283 cd07870 STKc_PFTAIRE2 Catalyti 98.8 9.4E-09 2E-13 102.3 8.3 92 47-144 4-96 (291)
284 cd06636 STKc_MAP4K4_6 Catalyti 98.8 9.8E-09 2.1E-13 101.7 8.4 105 39-144 7-113 (282)
285 cd06610 STKc_OSR1_SPAK Catalyt 98.8 1.1E-08 2.3E-13 100.4 8.6 92 48-144 1-93 (267)
286 cd05056 PTKc_FAK Catalytic dom 98.8 7.1E-09 1.5E-13 102.0 7.3 93 47-145 5-101 (270)
287 cd07836 STKc_Pho85 Catalytic d 98.8 9.9E-09 2.1E-13 101.8 8.3 91 49-145 1-92 (284)
288 cd05581 STKc_PDK1 Catalytic do 98.8 8.2E-09 1.8E-13 102.0 7.8 93 48-145 1-97 (280)
289 cd07863 STKc_CDK4 Catalytic do 98.8 1.2E-08 2.7E-13 101.3 8.8 94 49-143 1-99 (288)
290 cd05092 PTKc_TrkA Catalytic do 98.8 7.6E-09 1.6E-13 102.4 7.2 94 47-145 4-102 (280)
291 cd05087 PTKc_Aatyk1_Aatyk3 Cat 98.8 8.2E-09 1.8E-13 101.5 7.4 86 54-144 1-89 (269)
292 cd06658 STKc_PAK5 Catalytic do 98.8 7.2E-09 1.6E-13 103.2 7.1 91 48-143 22-112 (292)
293 cd05035 PTKc_Axl_like Catalyti 98.8 1.1E-08 2.3E-13 100.8 8.3 95 50-144 1-101 (273)
294 cd07861 STKc_CDK1_euk Catalyti 98.8 1.2E-08 2.5E-13 101.3 8.5 89 49-143 1-91 (285)
295 cd05098 PTKc_FGFR1 Catalytic d 98.8 5E-09 1.1E-13 105.2 5.9 96 45-145 15-119 (307)
296 cd07839 STKc_CDK5 Catalytic do 98.8 9.3E-09 2E-13 102.0 7.8 91 49-145 1-93 (284)
297 cd06608 STKc_myosinIII_like Ca 98.8 1.5E-08 3.2E-13 99.9 9.1 97 46-143 4-102 (275)
298 cd05057 PTKc_EGFR_like Catalyt 98.8 1E-08 2.2E-13 101.4 7.9 94 47-146 6-104 (279)
299 cd06659 STKc_PAK6 Catalytic do 98.8 8.4E-09 1.8E-13 103.0 7.3 91 48-143 21-111 (297)
300 cd08223 STKc_Nek4 Catalytic do 98.8 1.4E-08 3E-13 99.0 8.7 91 49-143 1-93 (257)
301 cd07876 STKc_JNK2 Catalytic do 98.8 1.2E-08 2.5E-13 105.0 8.5 96 45-141 18-116 (359)
302 cd06917 STKc_NAK1_like Catalyt 98.8 1.2E-08 2.5E-13 100.9 8.1 90 49-143 2-95 (277)
303 cd05070 PTKc_Fyn_Yrk Catalytic 98.8 7.3E-09 1.6E-13 101.2 6.5 90 46-143 4-93 (260)
304 cd05089 PTKc_Tie1 Catalytic do 98.8 1.1E-08 2.3E-13 102.2 7.8 93 48-145 2-98 (297)
305 cd05101 PTKc_FGFR2 Catalytic d 98.8 5.9E-09 1.3E-13 104.5 5.9 96 45-145 12-116 (304)
306 cd07860 STKc_CDK2_3 Catalytic 98.8 1.4E-08 3.1E-13 100.6 8.5 89 49-143 1-91 (284)
307 cd06614 STKc_PAK Catalytic dom 98.8 1.5E-08 3.2E-13 100.7 8.5 95 45-145 16-110 (286)
308 cd05073 PTKc_Hck Catalytic dom 98.8 8.6E-09 1.9E-13 100.8 6.7 92 45-144 3-94 (260)
309 cd05045 PTKc_RET Catalytic dom 98.8 1.2E-08 2.5E-13 101.6 7.7 91 49-144 1-97 (290)
310 cd05100 PTKc_FGFR3 Catalytic d 98.8 7.9E-09 1.7E-13 105.1 6.5 96 44-144 8-112 (334)
311 cd05075 PTKc_Axl Catalytic dom 98.8 1.5E-08 3.3E-13 99.7 8.4 94 50-143 1-99 (272)
312 cd05577 STKc_GRK Catalytic dom 98.8 1.5E-08 3.3E-13 100.0 8.3 85 56-145 1-88 (277)
313 cd05085 PTKc_Fer Catalytic dom 98.8 1.5E-08 3.3E-13 98.3 8.1 86 54-145 1-87 (250)
314 cd07849 STKc_ERK1_2_like Catal 98.8 1.8E-08 3.9E-13 102.6 8.9 95 47-142 4-99 (336)
315 PTZ00036 glycogen synthase kin 98.8 1.6E-08 3.4E-13 106.5 8.7 92 46-142 64-158 (440)
316 smart00219 TyrKc Tyrosine kina 98.8 1.7E-08 3.6E-13 98.5 8.2 91 50-145 1-96 (258)
317 cd05112 PTKc_Itk Catalytic dom 98.8 1.5E-08 3.2E-13 98.8 7.7 91 48-145 4-94 (256)
318 cd05094 PTKc_TrkC Catalytic do 98.8 9.8E-09 2.1E-13 102.2 6.5 94 47-145 4-102 (291)
319 cd05099 PTKc_FGFR4 Catalytic d 98.8 9.5E-09 2.1E-13 103.5 6.4 97 44-145 8-113 (314)
320 cd07878 STKc_p38beta_MAPK11 Ca 98.8 1.8E-08 3.9E-13 102.9 8.5 97 45-142 12-111 (343)
321 KOG4721 Serine/threonine prote 98.8 2.7E-09 5.8E-14 107.1 2.2 86 48-147 124-209 (904)
322 cd05115 PTKc_Zap-70 Catalytic 98.8 1.7E-08 3.6E-13 98.5 7.8 85 55-145 2-89 (257)
323 cd06617 PKc_MKK3_6 Catalytic d 98.8 1.7E-08 3.8E-13 99.9 8.0 90 48-143 1-92 (283)
324 cd05042 PTKc_Aatyk Catalytic d 98.8 1.7E-08 3.6E-13 99.2 7.8 87 54-145 1-90 (269)
325 cd08530 STKc_CNK2-like Catalyt 98.8 1.8E-08 4E-13 98.1 8.0 90 49-143 1-92 (256)
326 cd05111 PTK_HER3 Pseudokinase 98.8 1.5E-08 3.3E-13 100.1 7.5 93 48-146 7-104 (279)
327 cd05080 PTKc_Tyk2_rpt2 Catalyt 98.8 1.8E-08 3.8E-13 99.9 7.8 91 50-143 6-101 (283)
328 cd07833 STKc_CDKL Catalytic do 98.8 1.4E-08 3.1E-13 100.8 7.1 90 48-142 1-92 (288)
329 cd07874 STKc_JNK3 Catalytic do 98.8 1.9E-08 4.1E-13 103.3 8.1 97 45-142 14-113 (355)
330 cd06607 STKc_TAO Catalytic dom 98.7 2.1E-08 4.6E-13 100.6 8.2 92 46-143 13-107 (307)
331 cd08215 STKc_Nek Catalytic dom 98.7 2.6E-08 5.7E-13 97.0 8.6 91 49-144 1-93 (258)
332 cd07837 STKc_CdkB_plant Cataly 98.7 2.8E-08 6.1E-13 99.1 9.0 96 48-144 1-99 (295)
333 cd06627 STKc_Cdc7_like Catalyt 98.7 2.8E-08 6.1E-13 96.6 8.7 91 49-144 1-93 (254)
334 cd05082 PTKc_Csk Catalytic dom 98.7 1.6E-08 3.4E-13 98.6 6.9 91 47-145 5-95 (256)
335 cd06657 STKc_PAK4 Catalytic do 98.7 1.7E-08 3.7E-13 100.4 7.2 86 53-143 25-110 (292)
336 cd07875 STKc_JNK1 Catalytic do 98.7 2.4E-08 5.2E-13 102.8 8.4 96 46-142 22-120 (364)
337 cd06606 STKc_MAPKKK Catalytic 98.7 3.4E-08 7.4E-13 96.2 8.9 94 49-145 1-96 (260)
338 cd05041 PTKc_Fes_like Catalyti 98.7 2.4E-08 5.2E-13 97.0 7.7 86 54-145 1-87 (251)
339 cd05109 PTKc_HER2 Catalytic do 98.7 2.2E-08 4.8E-13 99.0 7.6 94 47-146 6-104 (279)
340 cd07845 STKc_CDK10 Catalytic d 98.7 3.3E-08 7.1E-13 99.4 8.9 95 46-144 5-101 (309)
341 cd05043 PTK_Ryk Pseudokinase d 98.7 2.1E-08 4.6E-13 99.1 7.4 95 46-144 4-103 (280)
342 PLN00009 cyclin-dependent kina 98.7 2.7E-08 5.8E-13 99.2 8.1 90 48-143 2-93 (294)
343 cd07864 STKc_CDK12 Catalytic d 98.7 3.8E-08 8.2E-13 98.5 9.1 98 45-143 4-108 (302)
344 cd07858 STKc_TEY_MAPK_plant Ca 98.7 2.8E-08 6.1E-13 101.1 8.2 97 47-144 4-102 (337)
345 PHA03209 serine/threonine kina 98.7 4.8E-08 1E-12 100.2 9.9 89 45-145 63-151 (357)
346 cd07880 STKc_p38gamma_MAPK12 C 98.7 3.4E-08 7.4E-13 100.7 8.8 97 46-143 13-112 (343)
347 cd05060 PTKc_Syk_like Catalyti 98.7 3.1E-08 6.7E-13 96.6 8.1 86 54-145 1-90 (257)
348 cd05077 PTK_Jak1_rpt1 Pseudoki 98.7 2.3E-08 5.1E-13 97.8 7.2 87 54-145 1-99 (262)
349 cd05040 PTKc_Ack_like Catalyti 98.7 2.7E-08 5.7E-13 97.1 7.5 86 54-145 1-90 (257)
350 cd05586 STKc_Sck1_like Catalyt 98.7 2.9E-08 6.3E-13 100.7 8.0 84 56-144 1-90 (330)
351 cd05613 STKc_MSK1_N N-terminal 98.7 3.4E-08 7.5E-13 98.2 8.4 91 49-144 1-99 (290)
352 cd07854 STKc_MAPK4_6 Catalytic 98.7 3.1E-08 6.7E-13 101.0 8.2 95 47-142 4-107 (342)
353 cd07835 STKc_CDK1_like Catalyt 98.7 4.4E-08 9.5E-13 97.1 9.1 90 50-145 1-92 (283)
354 cd05047 PTKc_Tie Catalytic dom 98.7 3E-08 6.4E-13 97.5 7.7 87 54-145 1-91 (270)
355 cd05069 PTKc_Yes Catalytic dom 98.7 1.9E-08 4.1E-13 98.3 6.2 90 47-144 5-94 (260)
356 cd07843 STKc_CDC2L1 Catalytic 98.7 3.3E-08 7.1E-13 98.5 8.0 94 48-145 5-100 (293)
357 cd05572 STKc_cGK_PKG Catalytic 98.7 3.6E-08 7.7E-13 96.5 8.1 84 56-144 1-87 (262)
358 cd05037 PTK_Jak_rpt1 Pseudokin 98.7 2.3E-08 4.9E-13 97.6 6.7 85 54-145 1-95 (259)
359 cd00192 PTKc Catalytic domain 98.7 3.6E-08 7.9E-13 96.2 8.0 86 54-144 1-90 (262)
360 cd05579 STKc_MAST_like Catalyt 98.7 3.3E-08 7E-13 96.8 7.7 84 56-144 1-87 (265)
361 cd05122 PKc_STE Catalytic doma 98.7 4.8E-08 1E-12 94.7 8.8 91 49-144 1-91 (253)
362 cd05110 PTKc_HER4 Catalytic do 98.7 3.1E-08 6.7E-13 99.2 7.5 93 47-145 6-103 (303)
363 cd07840 STKc_CDK9_like Catalyt 98.7 4.9E-08 1.1E-12 96.8 8.9 91 50-144 1-93 (287)
364 cd07856 STKc_Sty1_Hog1 Catalyt 98.7 3.3E-08 7.1E-13 100.2 7.6 94 45-143 7-102 (328)
365 cd07850 STKc_JNK Catalytic dom 98.7 4.9E-08 1.1E-12 100.1 8.9 97 45-142 13-112 (353)
366 cd06648 STKc_PAK_II Catalytic 98.7 4.8E-08 1E-12 96.9 8.6 90 49-143 20-109 (285)
367 cd05083 PTKc_Chk Catalytic dom 98.7 2.3E-08 5.1E-13 97.3 6.1 88 48-145 6-93 (254)
368 PHA03211 serine/threonine kina 98.7 4.3E-08 9.3E-13 103.0 8.4 85 48-144 169-253 (461)
369 cd06635 STKc_TAO1 Catalytic do 98.7 4.7E-08 1E-12 98.6 8.4 92 48-145 25-119 (317)
370 cd07842 STKc_CDK8_like Catalyt 98.7 4.9E-08 1.1E-12 98.4 8.5 90 49-142 1-95 (316)
371 cd07877 STKc_p38alpha_MAPK14 C 98.7 6E-08 1.3E-12 99.0 9.2 100 42-142 11-113 (345)
372 cd05116 PTKc_Syk Catalytic dom 98.7 4.1E-08 8.9E-13 95.7 7.6 84 55-144 2-89 (257)
373 cd07865 STKc_CDK9 Catalytic do 98.7 6.3E-08 1.4E-12 97.3 9.1 98 46-144 10-112 (310)
374 cd08226 PK_STRAD_beta Pseudoki 98.7 3.9E-08 8.5E-13 99.7 7.6 86 54-144 4-93 (328)
375 cd08528 STKc_Nek10 Catalytic d 98.7 5E-08 1.1E-12 95.8 8.0 90 49-143 1-102 (269)
376 KOG0666 Cyclin C-dependent kin 98.7 1.2E-08 2.5E-13 95.3 3.2 96 47-147 23-124 (438)
377 KOG0696 Serine/threonine prote 98.7 7.3E-09 1.6E-13 100.0 1.8 100 44-148 345-448 (683)
378 cd05058 PTKc_Met_Ron Catalytic 98.7 4.9E-08 1.1E-12 95.5 7.7 88 54-145 1-92 (262)
379 cd05086 PTKc_Aatyk2 Catalytic 98.7 4.9E-08 1.1E-12 95.8 7.7 85 55-144 2-89 (268)
380 PTZ00024 cyclin-dependent prot 98.7 5.3E-08 1.1E-12 99.1 8.2 91 47-143 7-112 (335)
381 PRK10345 hypothetical protein; 98.7 5.9E-08 1.3E-12 90.0 7.6 89 51-144 5-101 (210)
382 cd05091 PTKc_Ror2 Catalytic do 98.7 2.7E-08 5.9E-13 98.6 5.7 93 48-145 5-103 (283)
383 cd07855 STKc_ERK5 Catalytic do 98.7 5.7E-08 1.2E-12 98.8 8.1 96 47-144 4-101 (334)
384 cd05044 PTKc_c-ros Catalytic d 98.6 2.6E-08 5.7E-13 97.8 5.3 86 54-144 1-93 (269)
385 KOG0669 Cyclin T-dependent kin 98.6 8E-10 1.7E-14 99.8 -4.9 97 47-144 16-117 (376)
386 cd08222 STKc_Nek11 Catalytic d 98.6 4.5E-08 9.7E-13 95.6 6.9 90 49-143 1-95 (260)
387 KOG0986 G protein-coupled rece 98.6 9.1E-09 2E-13 100.7 1.6 95 47-146 184-281 (591)
388 KOG0599 Phosphorylase kinase g 98.6 1.1E-08 2.4E-13 93.6 2.0 93 47-144 16-117 (411)
389 cd07852 STKc_MAPK15 Catalytic 98.6 5.6E-08 1.2E-12 99.0 7.2 94 46-143 5-101 (337)
390 cd07830 STKc_MAK_like Catalyti 98.6 8.1E-08 1.7E-12 95.1 7.8 90 50-145 1-92 (283)
391 cd05583 STKc_MSK_N N-terminal 98.6 8.8E-08 1.9E-12 95.2 7.7 91 49-144 1-99 (288)
392 cd07834 STKc_MAPK Catalytic do 98.6 8.4E-08 1.8E-12 97.4 7.7 95 49-144 1-97 (330)
393 KOG1035 eIF-2alpha kinase GCN2 98.6 2.2E-08 4.7E-13 109.6 3.3 72 45-116 476-548 (1351)
394 cd06633 STKc_TAO3 Catalytic do 98.6 1.7E-07 3.8E-12 94.2 9.5 89 50-144 23-114 (313)
395 cd07831 STKc_MOK Catalytic dom 98.6 1.1E-07 2.3E-12 94.2 7.9 91 50-144 1-93 (282)
396 cd05074 PTKc_Tyro3 Catalytic d 98.6 1E-07 2.3E-12 93.8 7.6 94 50-143 1-100 (273)
397 KOG4579 Leucine-rich repeat (L 98.6 2.7E-09 5.8E-14 87.3 -3.1 85 485-571 52-136 (177)
398 cd05123 STKc_AGC Catalytic dom 98.6 1.2E-07 2.5E-12 92.1 7.7 84 56-144 1-87 (250)
399 KOG1859 Leucine-rich repeat pr 98.6 2.4E-09 5.2E-14 110.5 -4.3 198 363-573 85-294 (1096)
400 cd07868 STKc_CDK8 Catalytic do 98.6 1.7E-07 3.6E-12 94.6 9.1 86 53-144 6-93 (317)
401 smart00221 STYKc Protein kinas 98.6 1.9E-07 4.2E-12 88.7 8.7 91 50-145 1-92 (225)
402 cd05118 STKc_CMGC Catalytic do 98.6 1.5E-07 3.3E-12 93.1 8.2 90 50-145 1-92 (283)
403 cd06634 STKc_TAO2 Catalytic do 98.6 1.3E-07 2.7E-12 95.0 7.7 91 48-144 15-108 (308)
404 PHA03390 pk1 serine/threonine- 98.6 2E-07 4.4E-12 91.4 8.8 94 42-145 8-104 (267)
405 cd05611 STKc_Rim15_like Cataly 98.6 1.7E-07 3.8E-12 91.5 8.2 86 54-144 2-91 (260)
406 cd07829 STKc_CDK_like Catalyti 98.6 1.2E-07 2.7E-12 93.7 7.1 89 50-144 1-91 (282)
407 KOG0667 Dual-specificity tyros 98.6 7.5E-08 1.6E-12 99.3 5.6 91 48-145 186-282 (586)
408 cd05633 STKc_GRK3 Catalytic do 98.6 2E-07 4.3E-12 92.1 8.5 85 55-144 1-91 (279)
409 cd07866 STKc_BUR1 Catalytic do 98.5 2.1E-07 4.5E-12 93.6 8.5 96 47-143 7-107 (311)
410 KOG0584 Serine/threonine prote 98.5 3.3E-08 7.1E-13 101.1 2.6 91 52-145 44-138 (632)
411 PTZ00284 protein kinase; Provi 98.5 1.9E-07 4.1E-12 99.5 8.2 93 46-144 127-225 (467)
412 cd05606 STKc_beta_ARK Catalyti 98.5 2.7E-07 5.8E-12 91.1 8.3 85 55-144 1-91 (278)
413 KOG0608 Warts/lats-like serine 98.5 4.4E-08 9.4E-13 99.8 2.6 91 48-143 629-722 (1034)
414 KOG1345 Serine/threonine kinas 98.5 5E-08 1.1E-12 89.4 2.7 92 47-143 23-115 (378)
415 cd07879 STKc_p38delta_MAPK13 C 98.5 3.8E-07 8.3E-12 93.0 9.4 94 47-141 14-110 (342)
416 cd07867 STKc_CDC2L6 Catalytic 98.5 3.4E-07 7.4E-12 92.3 8.9 84 54-143 7-92 (317)
417 PLN03224 probable serine/threo 98.5 2.4E-07 5.2E-12 97.5 7.7 99 46-144 143-279 (507)
418 cd07851 STKc_p38 Catalytic dom 98.5 2.1E-07 4.5E-12 95.0 6.9 97 46-143 13-112 (343)
419 KOG0668 Casein kinase II, alph 98.5 3.3E-08 7E-13 88.3 0.5 89 46-140 36-125 (338)
420 cd07838 STKc_CDK4_6_like Catal 98.5 4.6E-07 1E-11 89.8 8.8 94 50-144 1-99 (287)
421 cd08216 PK_STRAD Pseudokinase 98.5 3E-07 6.6E-12 92.6 7.5 80 60-144 12-93 (314)
422 PHA03207 serine/threonine kina 98.5 3.1E-07 6.6E-12 95.5 7.6 86 46-142 90-177 (392)
423 KOG0695 Serine/threonine prote 98.5 7.6E-08 1.7E-12 90.6 2.5 94 47-145 249-346 (593)
424 KOG4645 MAPKKK (MAP kinase kin 98.4 6.5E-08 1.4E-12 106.6 2.0 94 46-144 1233-1328(1509)
425 cd05147 RIO1_euk RIO kinase fa 98.4 3E-07 6.5E-12 84.5 6.1 80 53-140 2-107 (190)
426 cd06616 PKc_MKK4 Catalytic dom 98.4 2.9E-07 6.3E-12 91.4 6.5 86 48-139 4-91 (288)
427 PRK10359 lipopolysaccharide co 98.4 4.2E-07 9.1E-12 84.7 6.9 94 46-141 29-134 (232)
428 cd06618 PKc_MKK7 Catalytic dom 98.4 6.9E-07 1.5E-11 89.1 8.5 92 46-143 13-106 (296)
429 KOG0604 MAP kinase-activated p 98.4 5.2E-08 1.1E-12 90.6 0.1 104 45-154 58-164 (400)
430 COG5238 RNA1 Ran GTPase-activa 98.4 6.3E-08 1.4E-12 88.8 0.1 224 161-399 29-285 (388)
431 COG5238 RNA1 Ran GTPase-activa 98.4 8.8E-08 1.9E-12 87.8 0.9 223 182-447 26-285 (388)
432 KOG2982 Uncharacterized conser 98.4 2.7E-07 5.8E-12 85.8 3.7 185 162-351 45-238 (418)
433 KOG0200 Fibroblast/platelet-de 98.4 5.5E-07 1.2E-11 98.2 6.5 99 42-145 290-397 (609)
434 KOG2982 Uncharacterized conser 98.4 1.2E-07 2.7E-12 88.0 1.2 112 206-317 41-156 (418)
435 KOG2120 SCF ubiquitin ligase, 98.3 1.6E-08 3.5E-13 93.8 -4.7 181 162-347 185-373 (419)
436 cd07857 STKc_MPK1 Catalytic do 98.3 1.3E-06 2.9E-11 88.6 8.5 93 49-143 1-98 (332)
437 KOG4579 Leucine-rich repeat (L 98.3 5.3E-08 1.1E-12 79.9 -2.2 109 162-274 53-161 (177)
438 cd00180 PKc Catalytic domain o 98.3 2.3E-06 5.1E-11 80.1 8.5 84 56-144 1-85 (215)
439 PHA03210 serine/threonine kina 98.3 7.7E-07 1.7E-11 95.3 5.0 92 46-143 146-255 (501)
440 KOG0596 Dual specificity; seri 98.3 5E-07 1.1E-11 91.1 3.1 95 47-148 360-457 (677)
441 cd05145 RIO1_like RIO kinase f 98.2 2.8E-06 6E-11 78.4 7.6 79 53-139 2-106 (190)
442 cd05576 STKc_RPK118_like Catal 98.2 2.5E-06 5.3E-11 82.0 6.9 76 59-144 4-79 (237)
443 KOG1006 Mitogen-activated prot 98.2 5E-07 1.1E-11 82.8 1.5 84 49-138 65-150 (361)
444 KOG2120 SCF ubiquitin ligase, 98.2 8.4E-08 1.8E-12 89.2 -3.6 182 235-444 186-373 (419)
445 PRK09605 bifunctional UGMP fam 98.2 8.2E-06 1.8E-10 88.2 10.6 89 47-142 332-428 (535)
446 smart00220 S_TKc Serine/Threon 98.1 7.3E-06 1.6E-10 78.7 8.2 80 60-144 1-81 (244)
447 PRK14879 serine/threonine prot 98.1 6.3E-06 1.4E-10 77.6 7.4 83 54-143 2-92 (211)
448 KOG1644 U2-associated snRNP A' 98.1 7.2E-06 1.6E-10 72.4 6.4 59 187-247 43-101 (233)
449 TIGR03724 arch_bud32 Kae1-asso 98.1 7.6E-06 1.7E-10 76.2 7.0 82 55-143 1-90 (199)
450 KOG1644 U2-associated snRNP A' 98.0 8.2E-06 1.8E-10 72.1 5.6 106 210-318 42-151 (233)
451 smart00090 RIO RIO-like kinase 98.0 1E-05 2.2E-10 77.2 6.7 87 48-141 28-139 (237)
452 PF13306 LRR_5: Leucine rich r 98.0 1.3E-05 2.9E-10 68.7 6.8 123 180-309 6-128 (129)
453 PF12799 LRR_4: Leucine Rich r 98.0 3.6E-06 7.8E-11 56.0 2.4 16 531-546 21-36 (44)
454 KOG0664 Nemo-like MAPK-related 98.0 9.6E-07 2.1E-11 81.0 -1.0 94 48-142 53-148 (449)
455 KOG0614 cGMP-dependent protein 98.0 9.4E-07 2E-11 88.1 -1.4 95 47-146 419-516 (732)
456 KOG3665 ZYG-1-like serine/thre 98.0 2E-06 4.4E-11 93.6 0.6 200 163-365 61-278 (699)
457 PF12799 LRR_4: Leucine Rich r 98.0 9.7E-06 2.1E-10 53.9 3.6 36 260-296 2-37 (44)
458 KOG1290 Serine/threonine prote 97.9 3.5E-06 7.6E-11 83.9 1.9 119 47-168 77-204 (590)
459 PRK15386 type III secretion pr 97.9 3.3E-05 7.1E-10 77.6 8.4 134 383-544 49-187 (426)
460 PLN03225 Serine/threonine-prot 97.9 1.6E-05 3.6E-10 85.9 6.4 96 46-145 130-230 (566)
461 cd05144 RIO2_C RIO kinase fami 97.9 3.3E-05 7.2E-10 71.8 7.2 84 48-141 15-122 (198)
462 KOG1167 Serine/threonine prote 97.9 1.1E-05 2.3E-10 79.2 3.7 93 43-142 31-127 (418)
463 PF13306 LRR_5: Leucine rich r 97.8 3.7E-05 7.9E-10 65.9 6.3 124 156-286 6-129 (129)
464 PRK15386 type III secretion pr 97.8 8.4E-05 1.8E-09 74.7 9.0 137 159-318 49-188 (426)
465 KOG0671 LAMMER dual specificit 97.8 1.2E-05 2.6E-10 77.8 2.3 92 47-145 88-185 (415)
466 KOG1165 Casein kinase (serine/ 97.7 1E-05 2.2E-10 76.8 1.4 99 48-154 28-127 (449)
467 KOG1163 Casein kinase (serine/ 97.7 5.3E-05 1.1E-09 68.8 5.0 96 46-149 13-109 (341)
468 KOG0984 Mitogen-activated prot 97.7 4.1E-05 8.8E-10 67.9 3.9 93 43-141 41-135 (282)
469 KOG1027 Serine/threonine prote 97.7 2.3E-05 5E-10 83.2 2.6 83 51-144 512-596 (903)
470 cd05120 APH_ChoK_like Aminogly 97.6 0.00011 2.4E-09 64.7 6.2 80 52-140 2-83 (155)
471 KOG0983 Mitogen-activated prot 97.6 3.2E-05 6.9E-10 71.5 2.4 99 50-154 94-194 (391)
472 KOG1164 Casein kinase (serine/ 97.6 3.4E-05 7.3E-10 77.7 2.8 92 49-145 19-115 (322)
473 PHA02882 putative serine/threo 97.6 0.00018 3.9E-09 71.6 7.9 93 47-141 11-117 (294)
474 PRK12274 serine/threonine prot 97.5 0.00028 6.1E-09 64.6 6.7 80 51-141 5-89 (218)
475 KOG3665 ZYG-1-like serine/thre 97.5 6E-05 1.3E-09 82.3 2.7 162 183-352 57-235 (699)
476 KOG0603 Ribosomal protein S6 k 97.4 7.6E-05 1.6E-09 77.3 3.0 92 47-147 321-413 (612)
477 PRK04750 ubiB putative ubiquin 97.4 0.00015 3.3E-09 76.7 5.0 35 48-83 120-154 (537)
478 KOG1024 Receptor-like protein 97.3 0.00026 5.7E-09 68.9 4.1 100 42-145 278-383 (563)
479 cd05119 RIO RIO kinase family, 97.3 0.00066 1.4E-08 62.4 6.7 31 53-84 2-32 (187)
480 KOG1166 Mitotic checkpoint ser 97.2 0.0003 6.6E-09 78.2 4.6 92 42-142 692-786 (974)
481 KOG2739 Leucine-rich acidic nu 97.2 0.00023 5E-09 65.9 2.8 82 482-565 61-150 (260)
482 KOG2739 Leucine-rich acidic nu 97.0 0.00037 8E-09 64.6 2.7 85 386-475 43-129 (260)
483 COG0515 SPS1 Serine/threonine 97.0 0.0018 4E-08 65.2 7.7 88 50-145 2-93 (384)
484 TIGR01982 UbiB 2-polyprenylphe 96.9 0.0013 2.8E-08 68.9 5.8 85 53-142 122-250 (437)
485 KOG2123 Uncharacterized conser 96.9 7.1E-05 1.5E-09 69.4 -3.4 82 233-319 18-100 (388)
486 KOG2123 Uncharacterized conser 96.7 7.9E-05 1.7E-09 69.1 -4.7 100 209-313 18-123 (388)
487 COG2112 Predicted Ser/Thr prot 96.6 0.0034 7.3E-08 55.1 4.8 79 51-142 25-104 (201)
488 KOG0670 U4/U6-associated splic 96.5 0.0024 5.3E-08 64.7 3.9 96 46-148 430-531 (752)
489 PRK01723 3-deoxy-D-manno-octul 96.3 0.011 2.4E-07 56.5 7.2 87 54-143 37-140 (239)
490 cd05154 ACAD10_11_like Acyl-Co 96.0 0.014 3E-07 55.1 6.3 85 54-141 4-91 (223)
491 KOG0195 Integrin-linked kinase 96.0 0.0012 2.7E-08 61.1 -1.1 88 51-145 193-282 (448)
492 KOG0665 Jun-N-terminal kinase 96.0 0.002 4.4E-08 61.3 0.3 94 47-142 16-112 (369)
493 cd05151 ChoK Choline Kinase (C 95.7 0.019 4E-07 51.6 5.6 76 54-139 4-80 (170)
494 KOG0473 Leucine-rich repeat pr 95.5 0.00044 9.6E-09 62.6 -5.9 88 157-247 37-124 (326)
495 KOG4341 F-box protein containi 95.4 0.0012 2.6E-08 65.1 -3.7 38 335-372 318-356 (483)
496 PF00560 LRR_1: Leucine Rich R 95.3 0.0086 1.9E-07 33.0 1.1 19 164-183 2-20 (22)
497 PF00560 LRR_1: Leucine Rich R 95.3 0.0093 2E-07 32.8 1.1 12 512-523 2-13 (22)
498 KOG4341 F-box protein containi 95.1 0.0017 3.8E-08 64.0 -3.6 84 186-269 138-226 (483)
499 KOG4308 LRR-containing protein 95.1 0.00018 4E-09 75.2 -11.2 112 432-546 202-330 (478)
500 KOG1947 Leucine rich repeat pr 94.9 0.0058 1.3E-07 65.5 -0.9 36 233-268 187-223 (482)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.6e-54 Score=494.55 Aligned_cols=441 Identities=34% Similarity=0.565 Sum_probs=279.5
Q ss_pred CCcCcccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCE
Q 042887 159 LNLLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEI 238 (628)
Q Consensus 159 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~ 238 (628)
+++++|++||+++|.+.+..|..++++++|++|+|++|.+.+..|..++.+++|++|+|++|.+++.+|..++++++|++
T Consensus 161 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 240 (968)
T PLN00113 161 GSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNH 240 (968)
T ss_pred hcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCE
Confidence 34444555555555544444444445555555555555444444444445555555555555444444444445555555
Q ss_pred EEeecccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCCc
Q 042887 239 ISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNN 318 (628)
Q Consensus 239 L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~ 318 (628)
|++++|.+++.+|..+. .+++|+.|++++|++++..|..+.++++|++|++++|.+.+..|..+..+++|++|++++|.
T Consensus 241 L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~ 319 (968)
T PLN00113 241 LDLVYNNLTGPIPSSLG-NLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNN 319 (968)
T ss_pred EECcCceeccccChhHh-CCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCc
Confidence 55555544444444333 24455555555554444444444444555555555554444444444444555555555544
Q ss_pred CCCcCCCCccccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeeccccc
Q 042887 319 LGTESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQL 398 (628)
Q Consensus 319 l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 398 (628)
+.+. .+..+..+++|+.|++++|.+.+..+..+..+. +|+.|++++|++.+..|..+..+++|+.+++++|.+
T Consensus 320 ~~~~------~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~-~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l 392 (968)
T PLN00113 320 FTGK------IPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHN-NLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSL 392 (968)
T ss_pred cCCc------CChhHhcCCCCCEEECcCCCCcCcCChHHhCCC-CCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEe
Confidence 4331 122344455556666666655555555555443 555555555555555555555444555555555554
Q ss_pred cccCCcCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCcccccccCCcccCCcchh-----------------
Q 042887 399 TGTIPHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLM----------------- 461 (628)
Q Consensus 399 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----------------- 461 (628)
.+..|..+..+++|+.|++++|++++..|..|..+++|+.|++++|.+++..|..+..+++|.
T Consensus 393 ~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~ 472 (968)
T PLN00113 393 EGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF 472 (968)
T ss_pred cccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc
Confidence 444444444555555555555555544454454455555555554444444443333332221
Q ss_pred ---cccceEEcCCCcCccccchhhhccCCCCEeeCcCCcCcccCCccccCCCCCCeEECcCceeeeecCccccCCCCCCE
Q 042887 462 ---TLSRLLDLSGNLLGGSIPLEVGNLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIKE 538 (628)
Q Consensus 462 ---~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 538 (628)
.+ +.|++++|++.+..|..+.++++|++|++++|++.+.+|..+..+++|++|++++|.+++.+|..+..+++|+.
T Consensus 473 ~~~~L-~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 551 (968)
T PLN00113 473 GSKRL-ENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQ 551 (968)
T ss_pred ccccc-eEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCE
Confidence 11 77899999998888999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCcccccCchhhhcccCCCeEeccCCcCcccCCCCCCCCCCCcccccCCCCCcccCCCCCCCCCCC
Q 042887 539 LDLSRNNLSGQIPKYLENLLFLAYLNLSYNHFEGEVPRKGVFGNRTGIHLIGNERLCGGLEELHLPSCHF 608 (628)
Q Consensus 539 L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~~~~l~l~~c~~ 608 (628)
|+|++|++++.+|..+.++++|+.|++++|+++|.+|..+.+.++....+.||+.+|++.+....++|..
T Consensus 552 L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~ 621 (968)
T PLN00113 552 LDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKR 621 (968)
T ss_pred EECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcc
Confidence 9999999999999999999999999999999999999999999888899999999998766556778864
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=8.4e-51 Score=470.06 Aligned_cols=427 Identities=34% Similarity=0.544 Sum_probs=384.7
Q ss_pred ccCCcCcccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCC
Q 042887 157 QRLNLLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSL 236 (628)
Q Consensus 157 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L 236 (628)
+.+.+++|++|||++|.+.+..|..++++++|++|++++|.+.+..|..|+++++|++|+|++|.+.+..|..++++++|
T Consensus 135 p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 214 (968)
T PLN00113 135 PRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSL 214 (968)
T ss_pred CccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCc
Confidence 44568899999999999999999999999999999999999999999999999999999999999998999999999999
Q ss_pred CEEEeecccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccC
Q 042887 237 EIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSK 316 (628)
Q Consensus 237 ~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 316 (628)
++|++++|.+++.+|..+. .+++|++|++++|++++..|..++++++|++|++++|++++..|..+..+++|++|++++
T Consensus 215 ~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 293 (968)
T PLN00113 215 KWIYLGYNNLSGEIPYEIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSD 293 (968)
T ss_pred cEEECcCCccCCcCChhHh-cCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcC
Confidence 9999999999988998876 499999999999999999999999999999999999999998999999999999999999
Q ss_pred CcCCCcCCCCccccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeeccc
Q 042887 317 NNLGTESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYN 396 (628)
Q Consensus 317 n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 396 (628)
|.+.+ ..+..+.++++|+.|++++|.+.+..+..+..++ +|+.|++++|.+.+.+|..+..+++|+.|++++|
T Consensus 294 n~l~~------~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n 366 (968)
T PLN00113 294 NSLSG------EIPELVIQLQNLEILHLFSNNFTGKIPVALTSLP-RLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTN 366 (968)
T ss_pred Ceecc------CCChhHcCCCCCcEEECCCCccCCcCChhHhcCC-CCCEEECcCCCCcCcCChHHhCCCCCcEEECCCC
Confidence 99876 3445677889999999999999999888888887 8999999999999999999999999999999999
Q ss_pred cccccCCcCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCcccccccCCcccCCcchhcccceEEcCCCcCcc
Q 042887 397 QLTGTIPHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGG 476 (628)
Q Consensus 397 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~ 476 (628)
++.+..|..++.+++|+.|++++|.+.+..|..+..+++|+.|++++|++++..|..+..+++| +.|++++|.+.+
T Consensus 367 ~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L----~~L~Ls~N~l~~ 442 (968)
T PLN00113 367 NLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLV----YFLDISNNNLQG 442 (968)
T ss_pred eeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCC----CEEECcCCcccC
Confidence 9999999999999999999999999999999999999999999999999999999999998888 777888888776
Q ss_pred ccchhhhccC-----------------------CCCEeeCcCCcCcccCCccccCCCCCCeEECcCceeeeecCccccCC
Q 042887 477 SIPLEVGNLR-----------------------NLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTL 533 (628)
Q Consensus 477 ~~~~~~~~l~-----------------------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 533 (628)
..+..+..++ +|+.|++++|++++..|..+..+++|+.|++++|++.+.+|..+..+
T Consensus 443 ~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 522 (968)
T PLN00113 443 RINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSC 522 (968)
T ss_pred ccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCc
Confidence 6665544444 45556666666666777777888889999999999998899999999
Q ss_pred CCCCEEECCCCcccccCchhhhcccCCCeEeccCCcCcccCCCC-CCCCCCCcccccCCCCCc
Q 042887 534 KSIKELDLSRNNLSGQIPKYLENLLFLAYLNLSYNHFEGEVPRK-GVFGNRTGIHLIGNERLC 595 (628)
Q Consensus 534 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~l~~~~~~~n~~~c 595 (628)
++|++|+|++|.+++.+|..|..+++|+.||+++|++++.+|.. ..+.+++.+++++|+..+
T Consensus 523 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 523 KKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred cCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 99999999999999999999999999999999999999888753 456788899999997654
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-44 Score=354.19 Aligned_cols=374 Identities=22% Similarity=0.244 Sum_probs=259.9
Q ss_pred ccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEEEeec
Q 042887 164 LEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHS 243 (628)
Q Consensus 164 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~ 243 (628)
.+.||+|+|++....+..|.++++|+++++.+|.++ .+|.-.....+|+.|+|.+|.|+.+..+.+..++.|+.||||.
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSr 158 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSR 158 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhh
Confidence 344555555555555555555555555555555554 3444333344455555555555544444455555555555555
Q ss_pred ccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCCcCCCcC
Q 042887 244 NRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNNLGTES 323 (628)
Q Consensus 244 n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 323 (628)
|.|+ ++|...|-.-.++++|+|++|.|+....+.|.++.+|.+|.|+.|+|+..++..|.++++|+.|+|..|+|
T Consensus 159 N~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~i---- 233 (873)
T KOG4194|consen 159 NLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRI---- 233 (873)
T ss_pred chhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccce----
Confidence 5554 44444443344455555555555544445555555555555555555544444455555555555555544
Q ss_pred CCCccccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeeccccccccCC
Q 042887 324 TSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGTIP 403 (628)
Q Consensus 324 ~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~ 403 (628)
.....-.|..+. +++.|.+..|.+...-...|-.+.++++|+|+.|++.....
T Consensus 234 --------------------------rive~ltFqgL~-Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~ 286 (873)
T KOG4194|consen 234 --------------------------RIVEGLTFQGLP-SLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNE 286 (873)
T ss_pred --------------------------eeehhhhhcCch-hhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhc
Confidence 333333334443 56666666666666666778888999999999999988888
Q ss_pred cCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCcccccccCCcccCCcchhcccceEEcCCCcCccccchhhh
Q 042887 404 HAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSIPLEVG 483 (628)
Q Consensus 404 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~~~~~~ 483 (628)
.++.++++|+.|++|+|.|...-++++...++|+.|+|++|+|+...+..|..+..| +.|+|++|++...-...|.
T Consensus 287 g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~L----e~LnLs~Nsi~~l~e~af~ 362 (873)
T KOG4194|consen 287 GWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQL----EELNLSHNSIDHLAEGAFV 362 (873)
T ss_pred ccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHh----hhhcccccchHHHHhhHHH
Confidence 889999999999999999998888899999999999999999998888888888888 7889999999977778899
Q ss_pred ccCCCCEeeCcCCcCcccCC---ccccCCCCCCeEECcCceeeeecCccccCCCCCCEEECCCCcccccCchhhhcccCC
Q 042887 484 NLRNLAEFDLSENHFSNEIP---VTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRNNLSGQIPKYLENLLFL 560 (628)
Q Consensus 484 ~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 560 (628)
.+++|++|||++|.++..+. ..|.++++|+.|++.+|++..+...+|.++++|++|||.+|.|..+-|++|..+ .|
T Consensus 363 ~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~L 441 (873)
T KOG4194|consen 363 GLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-EL 441 (873)
T ss_pred HhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hh
Confidence 99999999999999886543 457789999999999999997777889999999999999999998889999998 89
Q ss_pred CeEeccCCcCcccCC
Q 042887 561 AYLNLSYNHFEGEVP 575 (628)
Q Consensus 561 ~~L~ls~N~l~~~~p 575 (628)
++|-++.-.|-.+..
T Consensus 442 k~Lv~nSssflCDCq 456 (873)
T KOG4194|consen 442 KELVMNSSSFLCDCQ 456 (873)
T ss_pred hhhhhcccceEEecc
Confidence 998887665554433
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-44 Score=351.14 Aligned_cols=396 Identities=22% Similarity=0.248 Sum_probs=294.8
Q ss_pred ccEEEccCCccccccchhhhCC--CCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEEEe
Q 042887 164 LEMIDVGDNQLIGKFPDFIANF--SALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISL 241 (628)
Q Consensus 164 L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L 241 (628)
-..||.+++.+.......+.++ +.-+.||+|+|++..+.+..|.++++|+.+++..|.++ .+|.......+|+.|+|
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L 132 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDL 132 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEee
Confidence 3456777766654333333322 23334555555555555555555555555555555555 44544444444555555
Q ss_pred ecccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCCcCCC
Q 042887 242 HSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNNLGT 321 (628)
Q Consensus 242 ~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 321 (628)
.+|.|+ .+....++.++.|+.|||+.|.|+.+....|..-.++++|+|++|+|+.
T Consensus 133 ~~N~I~-------------------------sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~ 187 (873)
T KOG4194|consen 133 RHNLIS-------------------------SVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITT 187 (873)
T ss_pred eccccc-------------------------cccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccc
Confidence 555554 4444444445555555555555555544455555555555555555555
Q ss_pred cCCCCccccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeecccccccc
Q 042887 322 ESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGT 401 (628)
Q Consensus 322 ~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ 401 (628)
+..+.| ..+.+|..|.|+.|+++...+..|..++ .|+.|++..|+|.-.-...|.++++|+.|.+..|+|...
T Consensus 188 l~~~~F------~~lnsL~tlkLsrNrittLp~r~Fk~L~-~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL 260 (873)
T KOG4194|consen 188 LETGHF------DSLNSLLTLKLSRNRITTLPQRSFKRLP-KLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKL 260 (873)
T ss_pred cccccc------cccchheeeecccCcccccCHHHhhhcc-hhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccc
Confidence 444332 2233455555566666666666777666 899999999999866567899999999999999999988
Q ss_pred CCcCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCcccccccCCcccCCcchhcccceEEcCCCcCccccchh
Q 042887 402 IPHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSIPLE 481 (628)
Q Consensus 402 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~~~~ 481 (628)
-..+|..+.++++|+|+.|++...--.++.+++.|+.|++|+|.|+...++.+..+++| ++|+|++|+|+...+..
T Consensus 261 ~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL----~~LdLs~N~i~~l~~~s 336 (873)
T KOG4194|consen 261 DDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKL----KELDLSSNRITRLDEGS 336 (873)
T ss_pred cCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccc----eeEeccccccccCChhH
Confidence 88899999999999999999998888999999999999999999999999999999999 89999999999888999
Q ss_pred hhccCCCCEeeCcCCcCcccCCccccCCCCCCeEECcCceeeeecCc---cccCCCCCCEEECCCCcccccCchhhhccc
Q 042887 482 VGNLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGSLPL---SLKTLKSIKELDLSRNNLSGQIPKYLENLL 558 (628)
Q Consensus 482 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 558 (628)
|..+..|++|+|++|.+...-...|.++++|++|||++|.++..+.+ .|.++++|+.|++.+|+|..+...+|.+++
T Consensus 337 f~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~ 416 (873)
T KOG4194|consen 337 FRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLE 416 (873)
T ss_pred HHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCc
Confidence 99999999999999999977778899999999999999999976543 588899999999999999988888999999
Q ss_pred CCCeEeccCCcCcccCCCCCCCCCCCcccccCCCCCcc
Q 042887 559 FLAYLNLSYNHFEGEVPRKGVFGNRTGIHLIGNERLCG 596 (628)
Q Consensus 559 ~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~ 596 (628)
.|++|||.+|.|-..-|..-.-..++.+.+..-.++|.
T Consensus 417 ~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCD 454 (873)
T KOG4194|consen 417 ALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCD 454 (873)
T ss_pred ccceecCCCCcceeecccccccchhhhhhhcccceEEe
Confidence 99999999999987666432223677777777777884
No 5
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.9e-42 Score=324.03 Aligned_cols=412 Identities=27% Similarity=0.404 Sum_probs=299.6
Q ss_pred ccCCcCcccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCC
Q 042887 157 QRLNLLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSL 236 (628)
Q Consensus 157 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L 236 (628)
.+.++..+++|++++|++. ..|.+++.+..++.|+.++|++. .+|..+..+.+|+.|+.++|.+. ..|+.++.+..|
T Consensus 63 dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l 139 (565)
T KOG0472|consen 63 DLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDL 139 (565)
T ss_pred hhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhh
Confidence 3456677788888888877 56667778888888888888877 67777888888888888888877 577777888888
Q ss_pred CEEEeecccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccC
Q 042887 237 EIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSK 316 (628)
Q Consensus 237 ~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 316 (628)
+.|+..+|+++ ..|.+++. +.+|..+++.+|+++...|..+. ++.|++||..+|-++ ..|..++.+.+|..|++..
T Consensus 140 ~dl~~~~N~i~-slp~~~~~-~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~ 215 (565)
T KOG0472|consen 140 EDLDATNNQIS-SLPEDMVN-LSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRR 215 (565)
T ss_pred hhhhccccccc-cCchHHHH-HHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhh
Confidence 88888888887 67777765 77777778888877754444444 777788887777776 4455677777777777777
Q ss_pred CcCCCcCCCCccccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeeccc
Q 042887 317 NNLGTESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYN 396 (628)
Q Consensus 317 n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 396 (628)
|++... ..|..|+.|++++++.|++.........++. ++.+||+.+|++. ..|+.+.-+.+|..||+++|
T Consensus 216 Nki~~l--------Pef~gcs~L~Elh~g~N~i~~lpae~~~~L~-~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN 285 (565)
T KOG0472|consen 216 NKIRFL--------PEFPGCSLLKELHVGENQIEMLPAEHLKHLN-SLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNN 285 (565)
T ss_pred cccccC--------CCCCccHHHHHHHhcccHHHhhHHHHhcccc-cceeeeccccccc-cCchHHHHhhhhhhhcccCC
Confidence 777543 2455666677777777766555444444444 6667777777776 55666666677777777777
Q ss_pred cccccCCcCCCCCCCCCeEecccCcccc----------------------------------------------------
Q 042887 397 QLTGTIPHAIGELKNLQGLALVRNSLRG---------------------------------------------------- 424 (628)
Q Consensus 397 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~---------------------------------------------------- 424 (628)
.|+ ..|..++++ +|+.|-+.+|.++.
T Consensus 286 ~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~ 363 (565)
T KOG0472|consen 286 DIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIIT 363 (565)
T ss_pred ccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhh
Confidence 776 345566666 66666666665541
Q ss_pred ------------ccCccccCCC---CCCeEecCCcccccccCCcccCCcchhcccceEEcCCCcCccccchhhhccCCCC
Q 042887 425 ------------TIPDTLGNLT---LLNRLFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSIPLEVGNLRNLA 489 (628)
Q Consensus 425 ------------~~~~~~~~l~---~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~ 489 (628)
.+|+....-. -....+++.|++. ..|..+..+..+. +.+.+++|.++ .+|..++.+++|.
T Consensus 364 tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelv---T~l~lsnn~is-fv~~~l~~l~kLt 438 (565)
T KOG0472|consen 364 TKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELV---TDLVLSNNKIS-FVPLELSQLQKLT 438 (565)
T ss_pred hhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHH---HHHHhhcCccc-cchHHHHhhhcce
Confidence 1111111111 1334444555554 4444433333332 34667777776 6777889999999
Q ss_pred EeeCcCCcCcccCCccccCCCCCCeEECcCceeeeecCccccCCCCCCEEECCCCcccccCchhhhcccCCCeEeccCCc
Q 042887 490 EFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRNNLSGQIPKYLENLLFLAYLNLSYNH 569 (628)
Q Consensus 490 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~ 569 (628)
.|+|++|.+. .+|..++.+..|+.|++++|++. ..|.....+..|+.+-.++|++....|+.+.+|..|..||+.+|.
T Consensus 439 ~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNd 516 (565)
T KOG0472|consen 439 FLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNND 516 (565)
T ss_pred eeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCc
Confidence 9999999987 78888999999999999999998 788888888889999889999998888889999999999999999
Q ss_pred CcccCCCCCCCCCCCcccccCCCCC
Q 042887 570 FEGEVPRKGVFGNRTGIHLIGNERL 594 (628)
Q Consensus 570 l~~~~p~~~~~~~l~~~~~~~n~~~ 594 (628)
+...+|..|.+.+++++.+.|||+-
T Consensus 517 lq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 517 LQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hhhCChhhccccceeEEEecCCccC
Confidence 9999999999999999999999875
No 6
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.8e-40 Score=310.64 Aligned_cols=429 Identities=27% Similarity=0.376 Sum_probs=351.7
Q ss_pred cccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEEEee
Q 042887 163 KLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLH 242 (628)
Q Consensus 163 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~ 242 (628)
.++.+++++|.+.. ..+.+.++..|.+|++++|++. ..|.+++.+..++.|+.++|+++ .+|..++.+.+|..|+.+
T Consensus 46 ~l~~lils~N~l~~-l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLEV-LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchhh-ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 47889999999985 4456889999999999999998 78889999999999999999998 899999999999999999
Q ss_pred cccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCCcCCCc
Q 042887 243 SNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNNLGTE 322 (628)
Q Consensus 243 ~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 322 (628)
+|.+. ++|++++. +-.++.++..+|+++ ..|.++..+.+|..+++.+|++....+.... ++.|++||...|.++.+
T Consensus 123 ~n~~~-el~~~i~~-~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~tl 198 (565)
T KOG0472|consen 123 SNELK-ELPDSIGR-LLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLETL 198 (565)
T ss_pred cccee-ecCchHHH-Hhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhhcC
Confidence 99999 89999986 999999999999999 6788899999999999999999977776665 99999999999999875
Q ss_pred CCCCccccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeeccccccccC
Q 042887 323 STSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGTI 402 (628)
Q Consensus 323 ~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~ 402 (628)
++ .++.+.+|+.|++..|++...+ .|++.. .+.+++++.|++.-...+..+++.++.+||+..|+++ ..
T Consensus 199 P~-------~lg~l~~L~~LyL~~Nki~~lP--ef~gcs-~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~ 267 (565)
T KOG0472|consen 199 PP-------ELGGLESLELLYLRRNKIRFLP--EFPGCS-LLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EV 267 (565)
T ss_pred Ch-------hhcchhhhHHHHhhhcccccCC--CCCccH-HHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cC
Confidence 54 4777889999999999997654 555554 7899999999998444445669999999999999998 78
Q ss_pred CcCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCcccccccC-------------------------------
Q 042887 403 PHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNNLQGNVP------------------------------- 451 (628)
Q Consensus 403 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~------------------------------- 451 (628)
|+.++-+.+|.+||+|+|.++ ..|.+++++ +|+.|.+.+|.+...--
T Consensus 268 Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e 345 (565)
T KOG0472|consen 268 PDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTE 345 (565)
T ss_pred chHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCccccc
Confidence 999999999999999999999 578889999 99999999998742100
Q ss_pred -------CcccCCcchh-------------------------cccceEEcCCCcCccccchhhhccCCCCE-eeCcCCcC
Q 042887 452 -------SSLGNCQNLM-------------------------TLSRLLDLSGNLLGGSIPLEVGNLRNLAE-FDLSENHF 498 (628)
Q Consensus 452 -------~~~~~l~~L~-------------------------~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~-L~Ls~N~l 498 (628)
..+....... ......+++.|++. .+|..+..+..+.+ +++++|.+
T Consensus 346 ~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i 424 (565)
T KOG0472|consen 346 TAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI 424 (565)
T ss_pred ccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc
Confidence 0010000000 11134666667666 45655555544443 44555555
Q ss_pred cccCCccccCCCCCCeEECcCceeeeecCccccCCCCCCEEECCCCcccccCchhhhcccCCCeEeccCCcCcccCCC-C
Q 042887 499 SNEIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRNNLSGQIPKYLENLLFLAYLNLSYNHFEGEVPR-K 577 (628)
Q Consensus 499 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~-~ 577 (628)
. .+|..++.+++|..|+|++|.+. .+|..++.+..|+.||+|+|++. ..|+.+..+..|+.+-.++|++....|. .
T Consensus 425 s-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l 501 (565)
T KOG0472|consen 425 S-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGL 501 (565)
T ss_pred c-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHh
Confidence 4 78888899999999999999987 78888999999999999999998 7888888888888888888998765555 4
Q ss_pred CCCCCCCcccccCCC--------CCcccCCCCCCCCCCCCCCCcce
Q 042887 578 GVFGNRTGIHLIGNE--------RLCGGLEELHLPSCHFGRPRITR 615 (628)
Q Consensus 578 ~~~~~l~~~~~~~n~--------~~c~~~~~l~l~~c~~~~~~~~~ 615 (628)
..+.+++++++..|. ..|.++.+|.+.+++|+.||-..
T Consensus 502 ~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr~Pr~~i 547 (565)
T KOG0472|consen 502 KNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFRQPRHQI 547 (565)
T ss_pred hhhhhcceeccCCCchhhCChhhccccceeEEEecCCccCCCHHHH
Confidence 668889999998874 33567889999999999887543
No 7
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=5e-38 Score=311.26 Aligned_cols=366 Identities=24% Similarity=0.377 Sum_probs=249.0
Q ss_pred cCcccEEEccCCccc-cccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEE
Q 042887 161 LLKLEMIDVGDNQLI-GKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEII 239 (628)
Q Consensus 161 l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L 239 (628)
++-++-.|+++|.++ +..|+....++.++.|.|...++. .+|+.++.+.+|++|.+++|++. .+-+.+..++.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 445678899999998 678899999999999999998887 78999999999999999999987 577788889999999
Q ss_pred EeecccCcc-cCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCCc
Q 042887 240 SLHSNRFEG-SLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNN 318 (628)
Q Consensus 240 ~L~~n~l~~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~ 318 (628)
++..|++.. -+|.++|. +..|+.||||+|+++ ..|..+...+++-.|+|++|+|..++...|.+++.|-.||||+|+
T Consensus 84 ~~R~N~LKnsGiP~diF~-l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFR-LKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred hhhccccccCCCCchhcc-cccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccch
Confidence 999998853 57888885 999999999999998 778889999999999999999998888888899999999999999
Q ss_pred CCCcCCCCccccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeeccccc
Q 042887 319 LGTESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQL 398 (628)
Q Consensus 319 l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 398 (628)
+...++ ....+..|++|.|++|.+.......++.+. +|++|.+++.+-+
T Consensus 162 Le~LPP-------Q~RRL~~LqtL~Ls~NPL~hfQLrQLPsmt-sL~vLhms~TqRT----------------------- 210 (1255)
T KOG0444|consen 162 LEMLPP-------QIRRLSMLQTLKLSNNPLNHFQLRQLPSMT-SLSVLHMSNTQRT----------------------- 210 (1255)
T ss_pred hhhcCH-------HHHHHhhhhhhhcCCChhhHHHHhcCccch-hhhhhhcccccch-----------------------
Confidence 876543 355667788888888876544444333333 4444444443322
Q ss_pred cccCCcCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCcccccccCCcccCCcchhcccceEEcCCCcCcccc
Q 042887 399 TGTIPHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSI 478 (628)
Q Consensus 399 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~ 478 (628)
..-+|..+..+.+|..+|+|+|.+. ..|+.+-++++|+.|+||+|+|+ ......+...++ +.|++|.|+++ .+
T Consensus 211 l~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~l----EtLNlSrNQLt-~L 283 (1255)
T KOG0444|consen 211 LDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENL----ETLNLSRNQLT-VL 283 (1255)
T ss_pred hhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhh----hhhccccchhc-cc
Confidence 1123444555555555555555554 45555555555555555555555 233333334444 44555555555 45
Q ss_pred chhhhccCCCCEeeCcCCcCcc-cCCccccCCCCCCeEECcCceeeeecCccccCCCCCCEEECCCCcccccCchhhhcc
Q 042887 479 PLEVGNLRNLAEFDLSENHFSN-EIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRNNLSGQIPKYLENL 557 (628)
Q Consensus 479 ~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 557 (628)
|..+..+++|+.|++.+|+++- -+|..++.+..|+.+..++|.+. ..|+.+..+..|+.|.|++|++. ..|+.+.-+
T Consensus 284 P~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL 361 (1255)
T KOG0444|consen 284 PDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLL 361 (1255)
T ss_pred hHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhc
Confidence 5555555555555555555542 24555555555555555555554 55555555555555555555554 455555555
Q ss_pred cCCCeEeccCCcC
Q 042887 558 LFLAYLNLSYNHF 570 (628)
Q Consensus 558 ~~L~~L~ls~N~l 570 (628)
+.|+.||+..|+=
T Consensus 362 ~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 362 PDLKVLDLRENPN 374 (1255)
T ss_pred CCcceeeccCCcC
Confidence 5555555555543
No 8
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=315.23 Aligned_cols=403 Identities=28% Similarity=0.397 Sum_probs=291.0
Q ss_pred cccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEEEee
Q 042887 163 KLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLH 242 (628)
Q Consensus 163 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~ 242 (628)
+|++||+|+|++. ..|..+..+.+|+.|+++.|.|. ..|.+...+.+|++|.|.+|.+. ..|..+..+.+|++|+++
T Consensus 46 ~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 46 KLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 3899999999986 68888999999999999999998 67888999999999999999887 789999999999999999
Q ss_pred cccCcccCChhhhhCCCCCcEEecccC-------------------cccccccccccCCCCCCEEEcccccceeeccccc
Q 042887 243 SNRFEGSLPLNIGFNIPNVNFLSVGQN-------------------NFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDF 303 (628)
Q Consensus 243 ~n~l~~~~~~~~~~~l~~L~~L~L~~N-------------------~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~ 303 (628)
+|++. .+|..+.. +..++.+..++| .+.+.++.....++. .|+|++|.+. ...+
T Consensus 123 ~N~f~-~~Pl~i~~-lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dl 195 (1081)
T KOG0618|consen 123 FNHFG-PIPLVIEV-LTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDL 195 (1081)
T ss_pred hhccC-CCchhHHh-hhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhh
Confidence 99997 78877764 666666666666 222222222222222 3455555443 1123
Q ss_pred ccCCCCCEEEccCCcCCCcCCCCccccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhh
Q 042887 304 NRLSNLSRLFLSKNNLGTESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIK 383 (628)
Q Consensus 304 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~ 383 (628)
..+++|+.|....|++..+.. .-++++.|+.++|.+....... .+.+++.+++++|++++ +|+++.
T Consensus 196 s~~~~l~~l~c~rn~ls~l~~----------~g~~l~~L~a~~n~l~~~~~~p---~p~nl~~~dis~n~l~~-lp~wi~ 261 (1081)
T KOG0618|consen 196 SNLANLEVLHCERNQLSELEI----------SGPSLTALYADHNPLTTLDVHP---VPLNLQYLDISHNNLSN-LPEWIG 261 (1081)
T ss_pred hhccchhhhhhhhcccceEEe----------cCcchheeeeccCcceeecccc---ccccceeeecchhhhhc-chHHHH
Confidence 334444444444444433211 1245566666666655332221 22367777777777774 347777
Q ss_pred ccCCcCeeeeccccccccCCcCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCcccccccCCcccCCcch---
Q 042887 384 NLVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNL--- 460 (628)
Q Consensus 384 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--- 460 (628)
.+.+|+.++..+|.+. ..|..+....+|+.|++.+|.+. -+|+....+++|++|+|..|+|. ..|+.+....+.
T Consensus 262 ~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~ 338 (1081)
T KOG0618|consen 262 ACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLN 338 (1081)
T ss_pred hcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHH
Confidence 7777777777777775 55666666677777777777776 45555666777777777777776 333322111110
Q ss_pred -------------------hcccceEEcCCCcCccccchhhhccCCCCEeeCcCCcCcccCCccccCCCCCCeEECcCce
Q 042887 461 -------------------MTLSRLLDLSGNLLGGSIPLEVGNLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNS 521 (628)
Q Consensus 461 -------------------~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 521 (628)
...++.|.+.+|.+++..-+.+.++.+|+.|+|++|++.......+.+++.|+.|+||+|+
T Consensus 339 ~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNk 418 (1081)
T KOG0618|consen 339 TLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNK 418 (1081)
T ss_pred HHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccch
Confidence 0112678899999998888889999999999999999986666778899999999999999
Q ss_pred eeeecCccccCCCCCCEEECCCCcccccCchhhhcccCCCeEeccCCcCcc-cCCCCCCCCCCCcccccCCCCCc
Q 042887 522 FSGSLPLSLKTLKSIKELDLSRNNLSGQIPKYLENLLFLAYLNLSYNHFEG-EVPRKGVFGNRTGIHLIGNERLC 595 (628)
Q Consensus 522 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~~~l~~~~~~~n~~~c 595 (628)
++ .+|..+..++.|++|...+|++. ..| .+..++.|+.+|+|.|+++. .+|.....++++.++++||++.-
T Consensus 419 L~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~ 490 (1081)
T KOG0618|consen 419 LT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLV 490 (1081)
T ss_pred hh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcccc
Confidence 99 88899999999999999999998 566 78899999999999999986 45555445899999999999744
No 9
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=9.7e-36 Score=295.10 Aligned_cols=367 Identities=23% Similarity=0.360 Sum_probs=269.3
Q ss_pred CCCCCEEecccCcCc-ccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEEEeecccCcccCChhhhhCCCCCcE
Q 042887 185 FSALEAIDISANMLG-GRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNF 263 (628)
Q Consensus 185 l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~ 263 (628)
++-.+-.|+++|.++ +..|.....+++++.|.|...++. .+|+.++.+.+|++|.+++|++. .+-..+. .++.|+.
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs-~Lp~LRs 82 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELS-DLPRLRS 82 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhc-cchhhHH
Confidence 344455566666665 345555666666666666666555 45666666666666666666555 3333333 2555555
Q ss_pred EecccCcccc-cccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCCcCCCcCCCCccccccccCCCCCcee
Q 042887 264 LSVGQNNFTG-SLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNNLGTESTSDLDFLTLLTNCSQMEML 342 (628)
Q Consensus 264 L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~~~L~~L 342 (628)
+.+.+|++.. -+|..+-.+..|+.|||++|++. ..|..+....++-.|+||+|+|.+
T Consensus 83 v~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Iet--------------------- 140 (1255)
T KOG0444|consen 83 VIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIET--------------------- 140 (1255)
T ss_pred HhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCcccc---------------------
Confidence 5555555542 23444444555555555555554 234444444445555555555444
Q ss_pred ecccCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeeccccccccCCcCCCCCCCCCeEecccCcc
Q 042887 343 YLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSL 422 (628)
Q Consensus 343 ~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 422 (628)
++-..+.++. .|-.||+++|++. .+|..+..+..|++|.+++|.+.-.--..+..+++|++|++++.+-
T Consensus 141 ---------IPn~lfinLt-DLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqR 209 (1255)
T KOG0444|consen 141 ---------IPNSLFINLT-DLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQR 209 (1255)
T ss_pred ---------CCchHHHhhH-hHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccc
Confidence 4334444444 5677778888776 6677889999999999999987533233455678899999998654
Q ss_pred c-cccCccccCCCCCCeEecCCcccccccCCcccCCcchhcccceEEcCCCcCccccchhhhccCCCCEeeCcCCcCccc
Q 042887 423 R-GTIPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSIPLEVGNLRNLAEFDLSENHFSNE 501 (628)
Q Consensus 423 ~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 501 (628)
+ .-+|.++..+.+|..+|+|.|.+. ..|+.+..+.+| +.|+||+|+|+ .+....+...+|++|+||.|+++ .
T Consensus 210 Tl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~L----rrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~ 282 (1255)
T KOG0444|consen 210 TLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNL----RRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-V 282 (1255)
T ss_pred hhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhh----heeccCcCcee-eeeccHHHHhhhhhhccccchhc-c
Confidence 4 357889999999999999999998 899999999999 88999999998 45556666789999999999999 8
Q ss_pred CCccccCCCCCCeEECcCceeee-ecCccccCCCCCCEEECCCCcccccCchhhhcccCCCeEeccCCcCcccCCCCCCC
Q 042887 502 IPVTLSACTTLEYLHLQGNSFSG-SLPLSLKTLKSIKELDLSRNNLSGQIPKYLENLLFLAYLNLSYNHFEGEVPRKGVF 580 (628)
Q Consensus 502 ~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 580 (628)
.|..+..+++|+.|++.+|+++- -+|..++.+.+|+.+..++|.+. ..|+.+..+..|+.|.|++|++.+.+..+..+
T Consensus 283 LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL 361 (1255)
T KOG0444|consen 283 LPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLITLPEAIHLL 361 (1255)
T ss_pred chHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccceeechhhhhhc
Confidence 99999999999999999999873 57899999999999999999998 89999999999999999999999877788889
Q ss_pred CCCCcccccCCCCCc
Q 042887 581 GNRTGIHLIGNERLC 595 (628)
Q Consensus 581 ~~l~~~~~~~n~~~c 595 (628)
+.+..+++..||.+-
T Consensus 362 ~~l~vLDlreNpnLV 376 (1255)
T KOG0444|consen 362 PDLKVLDLRENPNLV 376 (1255)
T ss_pred CCcceeeccCCcCcc
Confidence 999999999998654
No 10
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.97 E-value=4.8e-33 Score=288.54 Aligned_cols=413 Identities=25% Similarity=0.356 Sum_probs=328.3
Q ss_pred cccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEEEee
Q 042887 163 KLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLH 242 (628)
Q Consensus 163 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~ 242 (628)
.++.|+++.|-+....-+...+..+|+.||+++|++. ..|..+..+.+|+.|+++.|.|. ..|.+..++.+|++|.|.
T Consensus 22 ~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~ 99 (1081)
T KOG0618|consen 22 ALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLK 99 (1081)
T ss_pred HHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheec
Confidence 3888999999887544455666667999999999997 88999999999999999999998 789999999999999999
Q ss_pred cccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccc-------------------cceeeccccc
Q 042887 243 SNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKN-------------------HFSGQVKIDF 303 (628)
Q Consensus 243 ~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-------------------~i~~~~~~~~ 303 (628)
.|.+. .+|..+.. +.+|+.|+++.|++. ..|..+..++.++.+..++| .+.+......
T Consensus 100 ~n~l~-~lP~~~~~-lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i 176 (1081)
T KOG0618|consen 100 NNRLQ-SLPASISE-LKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDI 176 (1081)
T ss_pred cchhh-cCchhHHh-hhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcch
Confidence 99998 89998875 999999999999998 56666666666666666655 3333333333
Q ss_pred ccCCCCCEEEccCCcCCCcCCCCccccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhh
Q 042887 304 NRLSNLSRLFLSKNNLGTESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIK 383 (628)
Q Consensus 304 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~ 383 (628)
..++. .|+|++|.+.. ..+.++.+|+.+....|++...... .++++.|+.++|.+....+. .
T Consensus 177 ~~l~~--~ldLr~N~~~~---------~dls~~~~l~~l~c~rn~ls~l~~~-----g~~l~~L~a~~n~l~~~~~~--p 238 (1081)
T KOG0618|consen 177 YNLTH--QLDLRYNEMEV---------LDLSNLANLEVLHCERNQLSELEIS-----GPSLTALYADHNPLTTLDVH--P 238 (1081)
T ss_pred hhhhe--eeecccchhhh---------hhhhhccchhhhhhhhcccceEEec-----CcchheeeeccCcceeeccc--c
Confidence 33333 47777777652 2355667778888888776543321 13788899999988844322 2
Q ss_pred ccCCcCeeeeccccccccCCcCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCcccccccCCcccCCcchhcc
Q 042887 384 NLVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTL 463 (628)
Q Consensus 384 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l 463 (628)
.-.+|+++++++|++.+ .|++++.+.+|+.++..+|+++ ..|..+...++|+.|.+..|.+. .+|....++..|
T Consensus 239 ~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL--- 312 (1081)
T KOG0618|consen 239 VPLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSL--- 312 (1081)
T ss_pred ccccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCccccccee---
Confidence 23578999999999985 5699999999999999999996 78888899999999999999998 777788888888
Q ss_pred cceEEcCCCcCccccchhhh-------------------------ccCCCCEeeCcCCcCcccCCccccCCCCCCeEECc
Q 042887 464 SRLLDLSGNLLGGSIPLEVG-------------------------NLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQ 518 (628)
Q Consensus 464 ~~~L~Ls~N~l~~~~~~~~~-------------------------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 518 (628)
+.|+|..|+|....+..+. .++.|+.|++.+|.+++..-..+.+++.|+.|+|+
T Consensus 313 -~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLs 391 (1081)
T KOG0618|consen 313 -RTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLS 391 (1081)
T ss_pred -eeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeec
Confidence 8899999999843222111 13457788999999998777788899999999999
Q ss_pred CceeeeecCccccCCCCCCEEECCCCcccccCchhhhcccCCCeEeccCCcCcccCCCCCCCCCCCcccccCCCCCc---
Q 042887 519 GNSFSGSLPLSLKTLKSIKELDLSRNNLSGQIPKYLENLLFLAYLNLSYNHFEGEVPRKGVFGNRTGIHLIGNERLC--- 595 (628)
Q Consensus 519 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~n~~~c--- 595 (628)
+|++.......+.+++.|++|+||+|+++ .+|+.+..+..|++|...+|++.. .|+....+.++.+|++.|.-.-
T Consensus 392 yNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~-fPe~~~l~qL~~lDlS~N~L~~~~l 469 (1081)
T KOG0618|consen 392 YNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLS-FPELAQLPQLKVLDLSCNNLSEVTL 469 (1081)
T ss_pred ccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceee-chhhhhcCcceEEecccchhhhhhh
Confidence 99998555556889999999999999999 788999999999999999999984 5588889999999999874221
Q ss_pred ------ccCCCCCCCCCC
Q 042887 596 ------GGLEELHLPSCH 607 (628)
Q Consensus 596 ------~~~~~l~l~~c~ 607 (628)
..+++|+++++.
T Consensus 470 ~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 470 PEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred hhhCCCcccceeeccCCc
Confidence 456777887765
No 11
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.95 E-value=4.8e-30 Score=242.33 Aligned_cols=277 Identities=18% Similarity=0.194 Sum_probs=174.0
Q ss_pred cccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeeccc-ccCcccCCcCccCCCCCCEEEe
Q 042887 163 KLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISE-NNFSCKLPLSIWNISSLEIISL 241 (628)
Q Consensus 163 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~-N~i~~~~p~~~~~l~~L~~L~L 241 (628)
+...++|..|+|+.+.|.+|+.+++|++||||+|.|+.+.|++|.++++|..|-+.+ |+|+....+.|.+|..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 467788888888888888888888888888888888888888888888877776666 8888766677888888888888
Q ss_pred ecccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccce------------eecccccccCCCC
Q 042887 242 HSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFS------------GQVKIDFNRLSNL 309 (628)
Q Consensus 242 ~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~------------~~~~~~~~~l~~L 309 (628)
.-|++. .++.+.++.+++|..|.+-+|.+..+--.+|..+..++++.+..|.+- ...+..++..+..
T Consensus 148 Nan~i~-Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 148 NANHIN-CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred Chhhhc-chhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence 888887 788888888888888888888888555557888888888888877632 1122223333333
Q ss_pred CEEEccCCcCCCcCCCCccccccccCCCCCc-eeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCc
Q 042887 310 SRLFLSKNNLGTESTSDLDFLTLLTNCSQME-MLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNI 388 (628)
Q Consensus 310 ~~L~L~~n~l~~~~~~~~~~~~~l~~~~~L~-~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L 388 (628)
.-..+.++++..+....|.. ....+. .+....+.........|..++ +|+.|++++|+++++-+.+|..+..+
T Consensus 227 ~p~rl~~~Ri~q~~a~kf~c-----~~esl~s~~~~~d~~d~~cP~~cf~~L~-~L~~lnlsnN~i~~i~~~aFe~~a~l 300 (498)
T KOG4237|consen 227 SPYRLYYKRINQEDARKFLC-----SLESLPSRLSSEDFPDSICPAKCFKKLP-NLRKLNLSNNKITRIEDGAFEGAAEL 300 (498)
T ss_pred chHHHHHHHhcccchhhhhh-----hHHhHHHhhccccCcCCcChHHHHhhcc-cceEeccCCCccchhhhhhhcchhhh
Confidence 33333333333322221110 000110 111112222222333444444 55556666666655555556555666
Q ss_pred CeeeeccccccccCCcCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCccc
Q 042887 389 NAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNNL 446 (628)
Q Consensus 389 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 446 (628)
++|.+..|++..+....|.++..|+.|+|++|+|+...|.+|..+.+|.+|++-.|.+
T Consensus 301 ~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 301 QELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred hhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 6666666655544445555555666666666666555555555555555555555443
No 12
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.94 E-value=8.9e-29 Score=233.77 Aligned_cols=301 Identities=19% Similarity=0.205 Sum_probs=239.0
Q ss_pred EEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEEEeec-cc
Q 042887 167 IDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHS-NR 245 (628)
Q Consensus 167 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~-n~ 245 (628)
.|=++-.++ .+|..+. ..-.+++|..|.|+.+.|.+|+.+++|+.||||+|+|+.+.|++|.++++|.+|-+.+ |+
T Consensus 51 VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 444555555 4554332 3678899999999999999999999999999999999999999999999998888777 99
Q ss_pred CcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCCcCCCcCCC
Q 042887 246 FEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNNLGTESTS 325 (628)
Q Consensus 246 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 325 (628)
|+ .+|...|.++..|+.|.+..|++..+..+.|..+++|..|.+.+|.+..+....|..+..++.+.+..|.+.....-
T Consensus 128 I~-~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL 206 (498)
T KOG4237|consen 128 IT-DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNL 206 (498)
T ss_pred hh-hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccccccc
Confidence 99 99999999999999999999999999999999999999999999999988888999999999999999974332110
Q ss_pred C------ccccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCc-hhhhccCCcCeeeeccccc
Q 042887 326 D------LDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIP-SEIKNLVNINAFGVEYNQL 398 (628)
Q Consensus 326 ~------~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~l~~n~l 398 (628)
. ...+..++...-.....+.+.++..+....+......+..--.+.+...+..| ..|..+++|+.+++++|+|
T Consensus 207 ~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i 286 (498)
T KOG4237|consen 207 PWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKI 286 (498)
T ss_pred chhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCcc
Confidence 0 01112233333444555666666666655554432222111122222222333 4699999999999999999
Q ss_pred cccCCcCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCcccccccCCcccCCcchhcccceEEcCCCcCc
Q 042887 399 TGTIPHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLG 475 (628)
Q Consensus 399 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~ 475 (628)
+++-+.+|.++.++++|.|..|++...-...|.++..|+.|+|.+|+|+...|..|..+..| ..|+|-.|.+.
T Consensus 287 ~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l----~~l~l~~Np~~ 359 (498)
T KOG4237|consen 287 TRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSL----STLNLLSNPFN 359 (498)
T ss_pred chhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEeccccccccee----eeeehccCccc
Confidence 99999999999999999999999998778889999999999999999999999999888888 67788777664
No 13
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.93 E-value=2.9e-24 Score=249.11 Aligned_cols=341 Identities=18% Similarity=0.236 Sum_probs=257.2
Q ss_pred ccchhhhCCCCCCEEecccCc------CcccccccccCCC-CCCEeecccccCcccCCcCccCCCCCCEEEeecccCccc
Q 042887 177 KFPDFIANFSALEAIDISANM------LGGRIPDSLCQLR-SLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEGS 249 (628)
Q Consensus 177 ~~~~~~~~l~~L~~L~Ls~n~------l~~~~~~~~~~l~-~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~ 249 (628)
..+++|.++++|+.|.+..+. +...+|..|..++ +|+.|++.++.++ .+|..| ...+|++|++++|.+. .
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~ 625 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-K 625 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-c
Confidence 456789999999999997654 3334677777775 6999999999987 678777 5789999999999998 7
Q ss_pred CChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCCc-CCCcCCCCcc
Q 042887 250 LPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNN-LGTESTSDLD 328 (628)
Q Consensus 250 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~ 328 (628)
++..+. .+++|+.|+|+++.....+| .++.+++|++|++++|......|..+..+++|+.|++++|. +..++.
T Consensus 626 L~~~~~-~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~---- 699 (1153)
T PLN03210 626 LWDGVH-SLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPT---- 699 (1153)
T ss_pred cccccc-cCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCC----
Confidence 877765 59999999999876554566 48889999999999987666778889999999999999864 443322
Q ss_pred ccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeecccccc-------cc
Q 042887 329 FLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLT-------GT 401 (628)
Q Consensus 329 ~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-------~~ 401 (628)
. .++++|+.|++++|...... +....+++.|++++|.+. .+|..+ .+++|+.|++.++... ..
T Consensus 700 ---~-i~l~sL~~L~Lsgc~~L~~~----p~~~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l 769 (1153)
T PLN03210 700 ---G-INLKSLYRLNLSGCSRLKSF----PDISTNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPL 769 (1153)
T ss_pred ---c-CCCCCCCEEeCCCCCCcccc----ccccCCcCeeecCCCccc-cccccc-cccccccccccccchhhcccccccc
Confidence 1 25788999999988643332 233458899999999986 445544 5677888877764321 11
Q ss_pred CCcCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCcccccccCCcccCCcchhcccceEEcCCCcCccccchh
Q 042887 402 IPHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSIPLE 481 (628)
Q Consensus 402 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~~~~ 481 (628)
.+..+...++|+.|++++|...+.+|..+.++++|+.|++++|..-+.+|..+ ++++| +.|++++|.....+|..
T Consensus 770 ~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL----~~L~Ls~c~~L~~~p~~ 844 (1153)
T PLN03210 770 TPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESL----ESLDLSGCSRLRTFPDI 844 (1153)
T ss_pred chhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-Ccccc----CEEECCCCCcccccccc
Confidence 12223345689999999988777788889999999999998875444666655 56666 78899987654444432
Q ss_pred hhccCCCCEeeCcCCcCcccCCccccCCCCCCeEECcCceeeeecCccccCCCCCCEEECCCCc
Q 042887 482 VGNLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRNN 545 (628)
Q Consensus 482 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 545 (628)
.++|++|+|++|.++ .+|..+..+++|+.|++++|+-...+|..+..+++|+.+++++|.
T Consensus 845 ---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 845 ---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 367889999999987 678888889999999998854434677778888899999988885
No 14
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=9.1e-24 Score=244.97 Aligned_cols=341 Identities=19% Similarity=0.246 Sum_probs=258.2
Q ss_pred cccccccCCCCCCEeeccccc------CcccCCcCccCCC-CCCEEEeecccCcccCChhhhhCCCCCcEEecccCcccc
Q 042887 201 RIPDSLCQLRSLNYLSISENN------FSCKLPLSIWNIS-SLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTG 273 (628)
Q Consensus 201 ~~~~~~~~l~~L~~L~Ls~N~------i~~~~p~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 273 (628)
..+.+|.++++|+.|.+..+. +...+|..|..++ +|+.|++.++.++ .+|..+ ...+|+.|++++|++.
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f--~~~~L~~L~L~~s~l~- 624 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF--RPENLVKLQMQGSKLE- 624 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC--CccCCcEEECcCcccc-
Confidence 346679999999999997664 3335677777764 6999999999998 888876 3789999999999998
Q ss_pred cccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCCcCCCcCCCCccccccccCCCCCceeecccCCccccc
Q 042887 274 SLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNNLGTESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVF 353 (628)
Q Consensus 274 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~ 353 (628)
..+..+..+++|+.|+++++......| .+..+++|++|++++|.... ..+..+.++++|+.|++++|..-...
T Consensus 625 ~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~------~lp~si~~L~~L~~L~L~~c~~L~~L 697 (1153)
T PLN03210 625 KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLV------ELPSSIQYLNKLEDLDMSRCENLEIL 697 (1153)
T ss_pred ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCcc------ccchhhhccCCCCEEeCCCCCCcCcc
Confidence 567778899999999999876444445 47889999999999875432 34456778889999999987543333
Q ss_pred chHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeeccccccccCCcCCCCCCCCCeEecccCccc-------ccc
Q 042887 354 LRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLR-------GTI 426 (628)
Q Consensus 354 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-------~~~ 426 (628)
+..+ .+ .+|+.|++++|...+.+|.. .++|+.|++++|.+. .+|..+ .+++|+.|++.++... ...
T Consensus 698 p~~i-~l-~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~ 770 (1153)
T PLN03210 698 PTGI-NL-KSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLT 770 (1153)
T ss_pred CCcC-CC-CCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccc
Confidence 3333 33 37899999998765555543 467889999999887 455544 5788888888774322 122
Q ss_pred CccccCCCCCCeEecCCcccccccCCcccCCcchhcccceEEcCCCcCccccchhhhccCCCCEeeCcCCcCcccCCccc
Q 042887 427 PDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSIPLEVGNLRNLAEFDLSENHFSNEIPVTL 506 (628)
Q Consensus 427 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 506 (628)
+..+...++|+.|++++|.....+|..++++++| +.|++++|...+.+|..+ ++++|+.|++++|.....+|..
T Consensus 771 ~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L----~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~- 844 (1153)
T PLN03210 771 PLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKL----EHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI- 844 (1153)
T ss_pred hhhhhccccchheeCCCCCCccccChhhhCCCCC----CEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc-
Confidence 2233345789999999998777889889888888 889999875444666655 6889999999998655445443
Q ss_pred cCCCCCCeEECcCceeeeecCccccCCCCCCEEECCCC-cccccCchhhhcccCCCeEeccCCc
Q 042887 507 SACTTLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRN-NLSGQIPKYLENLLFLAYLNLSYNH 569 (628)
Q Consensus 507 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~ls~N~ 569 (628)
.++|+.|+|++|.++ .+|.++..+++|+.|++++| ++. .+|..+..+++|+.+++++|.
T Consensus 845 --~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 845 --STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred --ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 368999999999998 68888999999999999984 455 567777888899999998885
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=1.4e-22 Score=218.12 Aligned_cols=267 Identities=28% Similarity=0.365 Sum_probs=141.1
Q ss_pred CCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEEEeecccCcccCChhhhhCCCCCcEEe
Q 042887 186 SALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLS 265 (628)
Q Consensus 186 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~ 265 (628)
..-..|+++.|.++ .+|..+. ++|+.|++++|+++ .+|.. .++|++|++++|+++ .+|.. .++|+.|+
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l----p~sL~~L~ 268 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL----PPGLLELS 268 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc----ccccceee
Confidence 34556777777776 4555554 36777777777776 34532 356666666666666 45531 34555666
Q ss_pred cccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCCcCCCcCCCCccccccccCCCCCceeecc
Q 042887 266 VGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNNLGTESTSDLDFLTLLTNCSQMEMLYLN 345 (628)
Q Consensus 266 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~ 345 (628)
+++|.++. +|.. .++|+.|++++|+++.+.. ..++|+.|++++|+++.++.
T Consensus 269 Ls~N~L~~-Lp~l---p~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L~~Lp~--------------------- 319 (788)
T PRK15387 269 IFSNPLTH-LPAL---PSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPA--------------------- 319 (788)
T ss_pred ccCCchhh-hhhc---hhhcCEEECcCCccccccc----cccccceeECCCCccccCCC---------------------
Confidence 66665552 2221 1334455555555543221 12344444444444432110
Q ss_pred cCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeeccccccccCCcCCCCCCCCCeEecccCccccc
Q 042887 346 TNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRGT 425 (628)
Q Consensus 346 ~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 425 (628)
.+..+ +.|++++|++++ +|.. ..+|+.|++++|++++
T Consensus 320 --------------lp~~L------------------------~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~- 356 (788)
T PRK15387 320 --------------LPSEL------------------------CKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS- 356 (788)
T ss_pred --------------Ccccc------------------------cccccccCcccc-cccc---ccccceEecCCCccCC-
Confidence 01122 333344444432 2211 1245556666665553
Q ss_pred cCccccCCCCCCeEecCCcccccccCCcccCCcchhcccceEEcCCCcCccccchhhhccCCCCEeeCcCCcCcccCCcc
Q 042887 426 IPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSIPLEVGNLRNLAEFDLSENHFSNEIPVT 505 (628)
Q Consensus 426 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 505 (628)
+|.. ..+|+.|++++|+|+. +|... .+| +.|++++|++++ +|.. .++|+.|++++|+++. +|..
T Consensus 357 LP~l---p~~L~~L~Ls~N~L~~-LP~l~---~~L----~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l 420 (788)
T PRK15387 357 LPTL---PSELYKLWAYNNRLTS-LPALP---SGL----KELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML 420 (788)
T ss_pred CCCC---Ccccceehhhcccccc-Ccccc---ccc----ceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc
Confidence 3322 2345555666666552 33322 223 556666666663 3322 2457777777777763 4432
Q ss_pred ccCCCCCCeEECcCceeeeecCccccCCCCCCEEECCCCcccccCchhhhc
Q 042887 506 LSACTTLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRNNLSGQIPKYLEN 556 (628)
Q Consensus 506 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 556 (628)
..+|+.|++++|+|+ .+|..+..+++|+.|+|++|++++..+..+..
T Consensus 421 ---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 421 ---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred ---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHH
Confidence 235667777777776 56777777777777777777777666665543
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=1.4e-22 Score=217.98 Aligned_cols=265 Identities=25% Similarity=0.309 Sum_probs=174.9
Q ss_pred CcccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEEEe
Q 042887 162 LKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISL 241 (628)
Q Consensus 162 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L 241 (628)
.+-..||+++|.++ .+|+.+. ++|+.|++++|+++. +|. .+++|++|++++|+++ .+|.. .++|+.|++
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeec
Confidence 45678999999998 5677665 489999999999984 554 3589999999999999 45643 468999999
Q ss_pred ecccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCCcCCC
Q 042887 242 HSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNNLGT 321 (628)
Q Consensus 242 ~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 321 (628)
++|.++ .+|.. ..+|+.|++++|+++. +|.. .++|+.|++++|+++++.. . ..+|+.|++++|.++.
T Consensus 270 s~N~L~-~Lp~l----p~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~~Lp~-l---p~~L~~L~Ls~N~L~~ 336 (788)
T PRK15387 270 FSNPLT-HLPAL----PSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPA-L---PSELCKLWAYNNQLTS 336 (788)
T ss_pred cCCchh-hhhhc----hhhcCEEECcCCcccc-cccc---ccccceeECCCCccccCCC-C---cccccccccccCcccc
Confidence 999998 67652 5689999999999994 4542 4789999999999986533 2 2468888999998875
Q ss_pred cCCCCccccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeecccccccc
Q 042887 322 ESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGT 401 (628)
Q Consensus 322 ~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ 401 (628)
++.. ..+|+.|++++|+++.. |.. ..+|+.|++++|++..
T Consensus 337 LP~l----------p~~Lq~LdLS~N~Ls~L--------------------------P~l---p~~L~~L~Ls~N~L~~- 376 (788)
T PRK15387 337 LPTL----------PSGLQELSVSDNQLASL--------------------------PTL---PSELYKLWAYNNRLTS- 376 (788)
T ss_pred cccc----------ccccceEecCCCccCCC--------------------------CCC---Ccccceehhhcccccc-
Confidence 4320 02455555555555432 211 1234445555555552
Q ss_pred CCcCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCcccccccCCcccCCcchhcccceEEcCCCcCccccchh
Q 042887 402 IPHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSIPLE 481 (628)
Q Consensus 402 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~~~~ 481 (628)
+|.. ..+|+.|++++|.+++ +|.. .++|+.|++++|++++ +|... .+| +.|++++|+|+ .+|..
T Consensus 377 LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l~---~~L----~~L~Ls~NqLt-~LP~s 440 (788)
T PRK15387 377 LPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPMLP---SGL----LSLSVYRNQLT-RLPES 440 (788)
T ss_pred Cccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcch---hhh----hhhhhccCccc-ccChH
Confidence 3322 2356666666666663 3322 2456666666666653 34322 123 45566666665 45666
Q ss_pred hhccCCCCEeeCcCCcCcccCCccc
Q 042887 482 VGNLRNLAEFDLSENHFSNEIPVTL 506 (628)
Q Consensus 482 ~~~l~~L~~L~Ls~N~l~~~~~~~~ 506 (628)
+.++++|+.|+|++|++++..+..+
T Consensus 441 l~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 441 LIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred HhhccCCCeEECCCCCCCchHHHHH
Confidence 6666666666666666665544444
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.82 E-value=1.7e-20 Score=203.45 Aligned_cols=119 Identities=20% Similarity=0.366 Sum_probs=72.5
Q ss_pred cccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEEEee
Q 042887 163 KLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLH 242 (628)
Q Consensus 163 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~ 242 (628)
+...|+++++.++. +|..+. ++|+.|+|++|+++ .+|..+. .+|++|++++|+++ .+|..+. .+|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 45677777777773 454443 46777777777777 3444443 46777777777776 4555443 357777777
Q ss_pred cccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEccccccee
Q 042887 243 SNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSG 297 (628)
Q Consensus 243 ~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 297 (628)
+|.++ .+|..+. .+|+.|++++|+++ .+|..+. ++|+.|++++|+++.
T Consensus 250 ~N~L~-~LP~~l~---s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~ 297 (754)
T PRK15370 250 INRIT-ELPERLP---SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT 297 (754)
T ss_pred CCccC-cCChhHh---CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc
Confidence 77776 6665542 45666666666666 3444332 355666666665553
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.82 E-value=2.4e-20 Score=202.39 Aligned_cols=247 Identities=23% Similarity=0.368 Sum_probs=133.4
Q ss_pred CCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEEEeecccCcccCChhhhhCCCCCcEEe
Q 042887 186 SALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLS 265 (628)
Q Consensus 186 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~ 265 (628)
.+...|+++++.++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|++|++++|.++ .+|..+ .++|+.|+
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l---~~~L~~L~ 247 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATL---PDTIQEME 247 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhh---hccccEEE
Confidence 35667777777777 4455443 46777777777777 4555443 46777777777776 666654 24677777
Q ss_pred cccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCCcCCCcCCCCccccccccCCCCCceeecc
Q 042887 266 VGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNNLGTESTSDLDFLTLLTNCSQMEMLYLN 345 (628)
Q Consensus 266 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~ 345 (628)
|++|+++ .+|..+. ++|+.|++++|+++.+ |..+. ++|+.|++++|+++.++.. + .++|+.|+++
T Consensus 248 Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~L-P~~l~--~sL~~L~Ls~N~Lt~LP~~-------l--p~sL~~L~Ls 312 (754)
T PRK15370 248 LSINRIT-ELPERLP--SALQSLDLFHNKISCL-PENLP--EELRYLSVYDNSIRTLPAH-------L--PSGITHLNVQ 312 (754)
T ss_pred CcCCccC-cCChhHh--CCCCEEECcCCccCcc-ccccC--CCCcEEECCCCccccCccc-------c--hhhHHHHHhc
Confidence 7777776 4454443 4677777777776643 33332 3566666666666543211 0 0133344444
Q ss_pred cCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeeccccccccCCcCCCCCCCCCeEecccCccccc
Q 042887 346 TNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRGT 425 (628)
Q Consensus 346 ~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 425 (628)
+| .++. +|..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|+++ .
T Consensus 313 ~N-------------------------~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~ 360 (754)
T PRK15370 313 SN-------------------------SLTA-LPETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-V 360 (754)
T ss_pred CC-------------------------cccc-CCccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-c
Confidence 44 4432 12211 1345555555555553 333332 45666666666665 3
Q ss_pred cCccccCCCCCCeEecCCcccccccCCcccCCcchhcccceEEcCCCcCccccchhh----hccCCCCEeeCcCCcCc
Q 042887 426 IPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSIPLEV----GNLRNLAEFDLSENHFS 499 (628)
Q Consensus 426 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~~~~~----~~l~~L~~L~Ls~N~l~ 499 (628)
+|..+. ++|+.|++++|+++ .+|..+. ..| +.|++++|++. .+|..+ +.++.+..|++.+|.++
T Consensus 361 LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL----~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 361 LPETLP--PTITTLDVSRNALT-NLPENLP--AAL----QIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CChhhc--CCcCEEECCCCcCC-CCCHhHH--HHH----HHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 444332 45666666666665 2333322 122 45566666665 233322 22355555666666554
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.78 E-value=3.8e-20 Score=187.18 Aligned_cols=88 Identities=23% Similarity=0.220 Sum_probs=43.6
Q ss_pred EEecccCccc-ccccccccCCCCCCEEEcccccceee----cccccccCCCCCEEEccCCcCCCcCCCCccccccccCCC
Q 042887 263 FLSVGQNNFT-GSLPHSFSNASNLQVLDVYKNHFSGQ----VKIDFNRLSNLSRLFLSKNNLGTESTSDLDFLTLLTNCS 337 (628)
Q Consensus 263 ~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~~ 337 (628)
.|+|..+.++ ......+..+.+|+.|+++++.++.. .+..+...+++++++++++.+...+.........+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4566666665 23334455666677777777766432 222334455566666666655421111011122333344
Q ss_pred CCceeecccCCcc
Q 042887 338 QMEMLYLNTNKFG 350 (628)
Q Consensus 338 ~L~~L~l~~n~~~ 350 (628)
+|+.|++++|.+.
T Consensus 82 ~L~~L~l~~~~~~ 94 (319)
T cd00116 82 GLQELDLSDNALG 94 (319)
T ss_pred ceeEEEccCCCCC
Confidence 5555555555444
No 20
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=4.6e-21 Score=161.15 Aligned_cols=179 Identities=27% Similarity=0.410 Sum_probs=118.6
Q ss_pred CCCCCCeEecccCccccccCccccCCCCCCeEecCCcccccccCCcccCCcchhcccceEEcCCCcCccccchhhhccCC
Q 042887 408 ELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSIPLEVGNLRN 487 (628)
Q Consensus 408 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~~~~~~~l~~ 487 (628)
.+.+++.|.+|+|+++ ..|+.+..+.+|+.|++++|+|+ ..|..++.+++| +.|+++-|++. ..|..|+.++.
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~kl----r~lnvgmnrl~-~lprgfgs~p~ 103 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKL----RILNVGMNRLN-ILPRGFGSFPA 103 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhh----hheecchhhhh-cCccccCCCch
Confidence 3455566666666666 45556666666666666666666 566666666666 66666666665 56667777777
Q ss_pred CCEeeCcCCcCcc-cCCccccCCCCCCeEECcCceeeeecCccccCCCCCCEEECCCCcccccCchhhhcccCCCeEecc
Q 042887 488 LAEFDLSENHFSN-EIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRNNLSGQIPKYLENLLFLAYLNLS 566 (628)
Q Consensus 488 L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls 566 (628)
|+.|||++|++.. ..|..|..+..|+.|+|++|.+. .+|..++++++|+.|.+..|.+- ..|..+..++.|++|.+.
T Consensus 104 levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiq 181 (264)
T KOG0617|consen 104 LEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQ 181 (264)
T ss_pred hhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcc
Confidence 7777777777654 35666666777777777777776 66777777777777777777776 566777777777777777
Q ss_pred CCcCcccCCCCCCCC---CCCcccccCCCCCc
Q 042887 567 YNHFEGEVPRKGVFG---NRTGIHLIGNERLC 595 (628)
Q Consensus 567 ~N~l~~~~p~~~~~~---~l~~~~~~~n~~~c 595 (628)
+|+++-.+|+.+.+. +-+...+..|||.-
T Consensus 182 gnrl~vlppel~~l~l~~~k~v~r~E~NPwv~ 213 (264)
T KOG0617|consen 182 GNRLTVLPPELANLDLVGNKQVMRMEENPWVN 213 (264)
T ss_pred cceeeecChhhhhhhhhhhHHHHhhhhCCCCC
Confidence 777776666654432 22334455666654
No 21
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.77 E-value=5.7e-20 Score=185.84 Aligned_cols=285 Identities=22% Similarity=0.282 Sum_probs=155.7
Q ss_pred EEEeecccCcccCChhhhhCCCCCcEEecccCccccc----ccccccCCCCCCEEEccccccee------ecccccccCC
Q 042887 238 IISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGS----LPHSFSNASNLQVLDVYKNHFSG------QVKIDFNRLS 307 (628)
Q Consensus 238 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~i~~------~~~~~~~~l~ 307 (628)
.|+|..+.+++.--..++..+.+|+.|+++++.++.. ++..+...++|++++++++.+.+ ..+..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 5778888887444445555688899999999988542 45556677889999999988762 2234566788
Q ss_pred CCCEEEccCCcCCCcCCCCccccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhhcc-C
Q 042887 308 NLSRLFLSKNNLGTESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNL-V 386 (628)
Q Consensus 308 ~L~~L~L~~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l-~ 386 (628)
+|++|++++|.+.......+ ...... ++|+.|++++|++++.....+ ...+..+ +
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~--~~l~~~-~~L~~L~ls~~~~~~~~~~~l---------------------~~~l~~~~~ 137 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVL--ESLLRS-SSLQELKLNNNGLGDRGLRLL---------------------AKGLKDLPP 137 (319)
T ss_pred ceeEEEccCCCCChhHHHHH--HHHhcc-CcccEEEeeCCccchHHHHHH---------------------HHHHHhCCC
Confidence 99999999998864221111 111111 446667776666553222111 1122233 4
Q ss_pred CcCeeeecccccccc----CCcCCCCCCCCCeEecccCccccc----cCccccCCCCCCeEecCCcccccccCCcccCCc
Q 042887 387 NINAFGVEYNQLTGT----IPHAIGELKNLQGLALVRNSLRGT----IPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQ 458 (628)
Q Consensus 387 ~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 458 (628)
+|+.|++++|.+++. .+..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++...
T Consensus 138 ~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~------- 210 (319)
T cd00116 138 ALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGA------- 210 (319)
T ss_pred CceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHH-------
Confidence 444555555444421 112233344455555555544421 11222223344444444444331110
Q ss_pred chhcccceEEcCCCcCccccchhhhccCCCCEeeCcCCcCcccCCcccc-----CCCCCCeEECcCceeee----ecCcc
Q 042887 459 NLMTLSRLLDLSGNLLGGSIPLEVGNLRNLAEFDLSENHFSNEIPVTLS-----ACTTLEYLHLQGNSFSG----SLPLS 529 (628)
Q Consensus 459 ~L~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~----~~~~~ 529 (628)
..+...+..+++|++|++++|.+++.....+. ..+.|+.|++++|.++. .+...
T Consensus 211 -----------------~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~ 273 (319)
T cd00116 211 -----------------SALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEV 273 (319)
T ss_pred -----------------HHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHH
Confidence 01222344556677777777766642222221 23677777777777752 22334
Q ss_pred ccCCCCCCEEECCCCccccc----Cchhhhcc-cCCCeEeccCCcC
Q 042887 530 LKTLKSIKELDLSRNNLSGQ----IPKYLENL-LFLAYLNLSYNHF 570 (628)
Q Consensus 530 ~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l-~~L~~L~ls~N~l 570 (628)
+..+++|+++++++|.++.. ....+... +.|+++++.+|++
T Consensus 274 ~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 274 LAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 55567788888888888744 23333334 5677888877764
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.75 E-value=1.5e-20 Score=158.14 Aligned_cols=161 Identities=26% Similarity=0.458 Sum_probs=145.5
Q ss_pred CCcCcccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCE
Q 042887 159 LNLLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEI 238 (628)
Q Consensus 159 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~ 238 (628)
.++..++.|.||+|+++ .+|..++.+.+|++|++++|+|+ ..|.+++++++|+.|+++-|++. +.|..|+.++-|+.
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhh
Confidence 35667888999999998 56667999999999999999998 78999999999999999999998 89999999999999
Q ss_pred EEeecccCcc-cCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCC
Q 042887 239 ISLHSNRFEG-SLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKN 317 (628)
Q Consensus 239 L~L~~n~l~~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n 317 (628)
|||++|++.. .+|..+|. +..|+.|+|++|.+. .+|..++++++|+.|.+..|.+- ..|..++.+++|++|++.+|
T Consensus 107 ldltynnl~e~~lpgnff~-m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFY-MTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhccccccccccCCcchhH-HHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 9999999963 57888876 999999999999999 88999999999999999999987 46778999999999999999
Q ss_pred cCCCcCCC
Q 042887 318 NLGTESTS 325 (628)
Q Consensus 318 ~l~~~~~~ 325 (628)
+++.++++
T Consensus 184 rl~vlppe 191 (264)
T KOG0617|consen 184 RLTVLPPE 191 (264)
T ss_pred eeeecChh
Confidence 99876643
No 23
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.69 E-value=2.7e-17 Score=157.67 Aligned_cols=95 Identities=29% Similarity=0.575 Sum_probs=85.5
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
...+|.+.+.||+|+||+||+|++++++..||||.+.+. .+...+-...|+.+|++++|||||++++++ ++.+
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~-----~~~~ 82 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCI-----EDDD 82 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEE-----ecCC
Confidence 356899999999999999999999999999999999776 445567788999999999999999999995 4588
Q ss_pred eeeeeecccccCCchhhhhccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
+.|+|||||.||||.+|++..+
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~~ 104 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRRG 104 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHcC
Confidence 9999999999999999998776
No 24
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.51 E-value=2.4e-14 Score=137.54 Aligned_cols=95 Identities=25% Similarity=0.433 Sum_probs=80.8
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc-------chhhhHHHHHHHHhhcCCCCcccccceeeecc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK-------GAAKSFVTECEALSNVRHRNLIKIITVCSSID 118 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 118 (628)
..+.|.+.+.+|+|+||.|-+|..+++|+.||||++++... .......+|+++|+++.|||||+++++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~----- 244 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDF----- 244 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeee-----
Confidence 34668889999999999999999999999999999976421 112335799999999999999999999
Q ss_pred ccccceeeeeecccccCCchhhhhccc
Q 042887 119 FKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
|+..+..||||||++||+|.+++-.+.
T Consensus 245 f~~~ds~YmVlE~v~GGeLfd~vv~nk 271 (475)
T KOG0615|consen 245 FEVPDSSYMVLEYVEGGELFDKVVANK 271 (475)
T ss_pred eecCCceEEEEEEecCccHHHHHHhcc
Confidence 556888899999999999999986554
No 25
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.48 E-value=1.3e-13 Score=138.97 Aligned_cols=107 Identities=46% Similarity=0.740 Sum_probs=92.5
Q ss_pred CCCcccHHHHHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccce
Q 042887 34 QFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITV 113 (628)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~ 113 (628)
..+.+++.++..++++|.....||+|+||.||+|... +|+.||||.+........++|.+|++++.+++|||+|+++++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 4667899999999999999999999999999999994 458999998765443214569999999999999999999999
Q ss_pred eeeccccccc-eeeeeecccccCCchhhhhcccc
Q 042887 114 CSSIDFKGVD-FKALIYEYMKCGSSEDWMHQSND 146 (628)
Q Consensus 114 ~~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~ 146 (628)
|.+ .. ...+|+|||++|+|++++.....
T Consensus 140 C~e-----~~~~~~LVYEym~nGsL~d~L~~~~~ 168 (361)
T KOG1187|consen 140 CLE-----GGEHRLLVYEYMPNGSLEDHLHGKKG 168 (361)
T ss_pred Eec-----CCceEEEEEEccCCCCHHHHhCCCCC
Confidence 975 34 58999999999999999987654
No 26
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=1.4e-13 Score=139.22 Aligned_cols=101 Identities=21% Similarity=0.370 Sum_probs=89.2
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
..|...+.||+||||.||.+++..+|+.||+|++.+. .....+...+||++++.++|||||+++++ |++...
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~-----FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHF-----FEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeE-----eecCCc
Confidence 5699999999999999999999999999999999874 45567889999999999999999999999 677999
Q ss_pred eeeeecccccCCchhhhhccccccccccCC
Q 042887 125 KALIYEYMKCGSSEDWMHQSNDKLEAGNLG 154 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~ 154 (628)
.|||.|+|+.|+|.++++ .++.+++..+.
T Consensus 93 VYivLELC~~~sL~el~K-rrk~ltEpEar 121 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLK-RRKPLTEPEAR 121 (592)
T ss_pred eEEEEEecCCccHHHHHH-hcCCCCcHHHH
Confidence 999999999999999988 55566655443
No 27
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.43 E-value=8.5e-14 Score=128.42 Aligned_cols=89 Identities=26% Similarity=0.431 Sum_probs=76.2
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
+++|+....+|+|+||+||+|+++.+|+.||||.+.... ....+-..||+++|++++|||+|.++++ |...+.
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEV-----Frrkrk 75 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEV-----FRRKRK 75 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHH-----HHhcce
Confidence 367888899999999999999999999999999996543 3444567999999999999999999999 556899
Q ss_pred eeeeecccccCCchhh
Q 042887 125 KALIYEYMKCGSSEDW 140 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~ 140 (628)
.++|+|||+..-|++.
T Consensus 76 lhLVFE~~dhTvL~eL 91 (396)
T KOG0593|consen 76 LHLVFEYCDHTVLHEL 91 (396)
T ss_pred eEEEeeecchHHHHHH
Confidence 9999999987555443
No 28
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.41 E-value=1.1e-14 Score=145.24 Aligned_cols=190 Identities=28% Similarity=0.460 Sum_probs=138.9
Q ss_pred EEEccCCcceeeCchhhhccCCcCeeeeccccccccCCcCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCcc
Q 042887 366 VIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNN 445 (628)
Q Consensus 366 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 445 (628)
..|++.|++. .+|..+..+..|+.+.+..|.+. .+|..++.+..|+.|||+.|+++ ..|..++.++ |+.|-+++|+
T Consensus 79 ~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNk 154 (722)
T KOG0532|consen 79 FADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNK 154 (722)
T ss_pred hhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCc
Confidence 4455566655 55667777777777777788776 67777888888888888888887 6677777765 7778888888
Q ss_pred cccccCCcccCCcchhcccceEEcCCCcCccccchhhhccCCCCEeeCcCCcCcccCCccccCCCCCCeEECcCceeeee
Q 042887 446 LQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSIPLEVGNLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGS 525 (628)
Q Consensus 446 l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 525 (628)
++ ..|..++....| ..||.+.|.+. .+|..++++.+|+.|.+..|++. ..|..+..+ .|..||+|+|+++ .
T Consensus 155 l~-~lp~~ig~~~tl----~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~ 225 (722)
T KOG0532|consen 155 LT-SLPEEIGLLPTL----AHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-Y 225 (722)
T ss_pred cc-cCCcccccchhH----HHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-e
Confidence 87 677777766666 56788888887 57777888888888888888887 566666644 4788888888887 7
Q ss_pred cCccccCCCCCCEEECCCCcccccCchhhhccc---CCCeEeccCCc
Q 042887 526 LPLSLKTLKSIKELDLSRNNLSGQIPKYLENLL---FLAYLNLSYNH 569 (628)
Q Consensus 526 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~---~L~~L~ls~N~ 569 (628)
+|-.|..|+.|++|-|.+|.++ .+|..+...- =.++|+..-++
T Consensus 226 iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred cchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 8888888888888888888887 4555543222 23556666553
No 29
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.41 E-value=3.1e-13 Score=122.60 Aligned_cols=95 Identities=29% Similarity=0.538 Sum_probs=82.3
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
+.|...+.+|+|.||+||+|++.++|+.||||.++... .+......||+..|++++|+||++++++ |...+..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~-----F~~~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDV-----FPHKSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhh-----ccCCCce
Confidence 46888899999999999999999999999999998753 3455678999999999999999999999 5568889
Q ss_pred eeeecccccCCchhhhhcccccc
Q 042887 126 ALIYEYMKCGSSEDWMHQSNDKL 148 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~~ 148 (628)
.+|+||++. +|+..+++....+
T Consensus 77 ~lVfEfm~t-dLe~vIkd~~i~l 98 (318)
T KOG0659|consen 77 SLVFEFMPT-DLEVVIKDKNIIL 98 (318)
T ss_pred EEEEEeccc-cHHHHhccccccc
Confidence 999999985 8988887766444
No 30
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.40 E-value=6.5e-15 Score=146.76 Aligned_cols=177 Identities=31% Similarity=0.470 Sum_probs=159.0
Q ss_pred ccCCcCeeeeccccccccCCcCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCcccccccCCcccCCcchhcc
Q 042887 384 NLVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTL 463 (628)
Q Consensus 384 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l 463 (628)
.+..-...|++.|++. .+|..++.+..|+.+.|++|.+. .+|..+.++..|+++|++.|+++ ..|..++.|+ |
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-L--- 145 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-L--- 145 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-c---
Confidence 4455567899999998 78888899999999999999999 78899999999999999999998 7888888876 3
Q ss_pred cceEEcCCCcCccccchhhhccCCCCEeeCcCCcCcccCCccccCCCCCCeEECcCceeeeecCccccCCCCCCEEECCC
Q 042887 464 SRLLDLSGNLLGGSIPLEVGNLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSR 543 (628)
Q Consensus 464 ~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 543 (628)
+.|-+++|+++ .+|..++.++.|..||.+.|.+. ..|..++++.+|+.|.+..|++. .+|..+..|+ |..||+|.
T Consensus 146 -kvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfSc 220 (722)
T KOG0532|consen 146 -KVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSC 220 (722)
T ss_pred -eeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeeccc
Confidence 78999999998 78889999999999999999998 67888999999999999999998 6777777654 99999999
Q ss_pred CcccccCchhhhcccCCCeEeccCCcCccc
Q 042887 544 NNLSGQIPKYLENLLFLAYLNLSYNHFEGE 573 (628)
Q Consensus 544 N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 573 (628)
|+++ .+|-.|.+|+.|++|-|.+|+++..
T Consensus 221 Nkis-~iPv~fr~m~~Lq~l~LenNPLqSP 249 (722)
T KOG0532|consen 221 NKIS-YLPVDFRKMRHLQVLQLENNPLQSP 249 (722)
T ss_pred Ccee-ecchhhhhhhhheeeeeccCCCCCC
Confidence 9999 7899999999999999999999854
No 31
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.40 E-value=1.9e-13 Score=136.15 Aligned_cols=93 Identities=26% Similarity=0.420 Sum_probs=83.5
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc--chhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK--GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
+++|.+.+.||+|+||+||+|+.+.+.+.||+|.+.+..+ ...+...+|++++++++|||||.++++ |++...
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~es-----fEt~~~ 75 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLES-----FETSAH 75 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHh-----hcccce
Confidence 3678899999999999999999999999999999987643 455678999999999999999999999 788999
Q ss_pred eeeeecccccCCchhhhhccc
Q 042887 125 KALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~ 145 (628)
+++|+|||.| +|++++.++.
T Consensus 76 ~~vVte~a~g-~L~~il~~d~ 95 (808)
T KOG0597|consen 76 LWVVTEYAVG-DLFTILEQDG 95 (808)
T ss_pred EEEEehhhhh-hHHHHHHhcc
Confidence 9999999997 9999997765
No 32
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.39 E-value=4.4e-13 Score=133.37 Aligned_cols=95 Identities=23% Similarity=0.420 Sum_probs=85.6
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
..++|+++++||+|+||.||.|+-+.+|+.||+|++++.. ....+.+..|-++|....+|+||+++.+ |++.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs-----FQD~ 213 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS-----FQDK 213 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE-----ecCC
Confidence 4578999999999999999999999999999999998763 5667788899999999999999999988 6779
Q ss_pred ceeeeeecccccCCchhhhhccc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
...|+||||.+|||+..++.+.+
T Consensus 214 ~~LYLiMEylPGGD~mTLL~~~~ 236 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLMRKD 236 (550)
T ss_pred CeeEEEEEecCCccHHHHHHhcC
Confidence 99999999999999999886554
No 33
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.39 E-value=3.3e-13 Score=128.64 Aligned_cols=96 Identities=26% Similarity=0.439 Sum_probs=86.2
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
.++|++.++||+|+||+||.++.+.+++.||+|++++. .....+...+|..+|.+++||.||+++.. |++..
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys-----FQt~~ 98 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS-----FQTEE 98 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe-----cccCC
Confidence 46899999999999999999999999999999999875 34456778899999999999999999988 78899
Q ss_pred eeeeeecccccCCchhhhhccccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSNDK 147 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~ 147 (628)
..|+|+||+.||+|..++.+.+..
T Consensus 99 kLylVld~~~GGeLf~hL~~eg~F 122 (357)
T KOG0598|consen 99 KLYLVLDYLNGGELFYHLQREGRF 122 (357)
T ss_pred eEEEEEeccCCccHHHHHHhcCCc
Confidence 999999999999999999866643
No 34
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.39 E-value=1.2e-13 Score=131.95 Aligned_cols=94 Identities=22% Similarity=0.415 Sum_probs=84.8
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
...|++.+.+|+|.||+|-+|.....|+.||||.+++. ++++.-.+.||++||..+.||||++++++ |+..+
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV-----FENkd 126 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV-----FENKD 126 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh-----hcCCc
Confidence 45789999999999999999999899999999999765 34556678999999999999999999999 78899
Q ss_pred eeeeeecccccCCchhhhhccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
...+||||..+|+|++|+.+.+
T Consensus 127 KIvivMEYaS~GeLYDYiSer~ 148 (668)
T KOG0611|consen 127 KIVIVMEYASGGELYDYISERG 148 (668)
T ss_pred eEEEEEEecCCccHHHHHHHhc
Confidence 9999999999999999998765
No 35
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.38 E-value=1.8e-13 Score=130.50 Aligned_cols=114 Identities=25% Similarity=0.347 Sum_probs=93.9
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc-ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc-eee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK-QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD-FKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~-~~~ 126 (628)
+.+..+.||+|..|+||+++|+.+++.+|+|.+... +....+++.+|++++.+.+||+||++++++.+ .. ..+
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~-----~~~~is 154 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS-----NGEEIS 154 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe-----CCceEE
Confidence 566778999999999999999999999999999654 34566889999999999999999999999764 44 699
Q ss_pred eeecccccCCchhhhhccccccccccCCccccCCcCcccEEE
Q 042887 127 LIYEYMKCGSSEDWMHQSNDKLEAGNLGLIQRLNLLKLEMID 168 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~l~~L~~L~ 168 (628)
++||||.+|+|+...+.. +.+++..++.+..+-++.|.+|+
T Consensus 155 I~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh 195 (364)
T KOG0581|consen 155 ICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLH 195 (364)
T ss_pred eehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999988765 45666666665555555565555
No 36
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.37 E-value=8.7e-13 Score=128.10 Aligned_cols=100 Identities=25% Similarity=0.427 Sum_probs=80.8
Q ss_pred ccHHHHHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhc--CCCCcccccceee
Q 042887 38 VSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV--RHRNLIKIITVCS 115 (628)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l--~h~nIv~l~~~~~ 115 (628)
.++-.......+..+.+.||+|.||.||+|.| .|+.||||++...+ .+.+.||.++.+.. +|+||+.++++-.
T Consensus 201 lplLVQRTiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~ 275 (513)
T KOG2052|consen 201 LPLLVQRTIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADN 275 (513)
T ss_pred chhHhHHhhhheeEEEEEecCccccceeeccc--cCCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccc
Confidence 34445566677888999999999999999999 78999999997543 36778888887654 8999999998754
Q ss_pred eccccccceeeeeecccccCCchhhhhc
Q 042887 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 116 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 143 (628)
.. -......|+|.+|.+.|+|++|+.+
T Consensus 276 ~~-~gs~TQLwLvTdYHe~GSL~DyL~r 302 (513)
T KOG2052|consen 276 KD-NGSWTQLWLVTDYHEHGSLYDYLNR 302 (513)
T ss_pred cC-CCceEEEEEeeecccCCcHHHHHhh
Confidence 21 1334689999999999999999976
No 37
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.37 E-value=6.3e-13 Score=135.01 Aligned_cols=106 Identities=25% Similarity=0.408 Sum_probs=87.8
Q ss_pred cHHHHHHHhCCCCcCceeecCCceeEEEEEECCCCc---E-EEEEEeecc---ccchhhhHHHHHHHHhhcCCCCccccc
Q 042887 39 SYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGT---T-VAVKVMNLK---QKGAAKSFVTECEALSNVRHRNLIKII 111 (628)
Q Consensus 39 ~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~---~-~avK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~ 111 (628)
+-..|+...++..+.+.||+|+||.||+|.....+. . ||+|..... .+.....|.+|+++|++++|||||+++
T Consensus 148 ~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~y 227 (474)
T KOG0194|consen 148 PRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFY 227 (474)
T ss_pred cccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 344566667777888999999999999999875432 3 899998752 355678899999999999999999999
Q ss_pred ceeeeccccccceeeeeecccccCCchhhhhccccccc
Q 042887 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLE 149 (628)
Q Consensus 112 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~ 149 (628)
+++.. ....|+|||+|+||+|.+++++..+.++
T Consensus 228 GVa~~-----~~Pl~ivmEl~~gGsL~~~L~k~~~~v~ 260 (474)
T KOG0194|consen 228 GVAVL-----EEPLMLVMELCNGGSLDDYLKKNKKSLP 260 (474)
T ss_pred EEEcC-----CCccEEEEEecCCCcHHHHHHhCCCCCC
Confidence 99765 7789999999999999999988776443
No 38
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.36 E-value=3e-13 Score=142.18 Aligned_cols=98 Identities=24% Similarity=0.484 Sum_probs=83.6
Q ss_pred HHHhCCCCcCceeecCCceeEEEEEECC-----CCcEEEEEEeeccccc-hhhhHHHHHHHHhhcCCCCcccccceeeec
Q 042887 44 SKATNNFSASNMIGQGSFGFVYKGKLGE-----TGTTVAVKVMNLKQKG-AAKSFVTECEALSNVRHRNLIKIITVCSSI 117 (628)
Q Consensus 44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~~avK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 117 (628)
..++.+.+..+.||+|+||+||+|+... ....||||.++..... ...+|.||++.|+.++|||||+++++|..
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~- 560 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE- 560 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc-
Confidence 3456677778899999999999999642 2356999999876544 67889999999999999999999999986
Q ss_pred cccccceeeeeecccccCCchhhhhcccc
Q 042887 118 DFKGVDFKALIYEYMKCGSSEDWMHQSND 146 (628)
Q Consensus 118 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~ 146 (628)
.+.++||+|||..|||.+|++....
T Consensus 561 ----~~P~~MvFEYm~~GDL~eFLra~sP 585 (774)
T KOG1026|consen 561 ----GDPLCMVFEYMDHGDLHEFLRARSP 585 (774)
T ss_pred ----CCeeEEEEEecccccHHHHHHhhCC
Confidence 7889999999999999999986653
No 39
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.36 E-value=5.6e-13 Score=131.51 Aligned_cols=100 Identities=28% Similarity=0.449 Sum_probs=82.4
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
..+.|+..+.||+|.||.||+|++..+|+.||+|.+.... .+......|||.+|+++.||||+++.+..++ ....
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~---~~~~ 191 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTS---KLSG 191 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEe---cCCc
Confidence 3467888899999999999999999999999999998754 4455667899999999999999999998765 2357
Q ss_pred eeeeeecccccCCchhhhhccccccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSNDKLE 149 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~ 149 (628)
.+|||+|||+. ||..++...+-+++
T Consensus 192 siYlVFeYMdh-DL~GLl~~p~vkft 216 (560)
T KOG0600|consen 192 SIYLVFEYMDH-DLSGLLSSPGVKFT 216 (560)
T ss_pred eEEEEEecccc-hhhhhhcCCCcccC
Confidence 89999999985 77777655444443
No 40
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.35 E-value=7.3e-13 Score=136.90 Aligned_cols=98 Identities=27% Similarity=0.468 Sum_probs=83.9
Q ss_pred CCCcCceeecCCceeEEEEEECCCC---cEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETG---TTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~---~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
...+.++||.|.||.|++|+.+.-| ..||||.++... +.....|..|+.||.+.+||||+++.++.+. .+.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk-----s~P 704 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK-----SKP 704 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEec-----Cce
Confidence 4467889999999999999987655 469999998763 4567889999999999999999999999554 788
Q ss_pred eeeeecccccCCchhhhhccccccccc
Q 042887 125 KALIYEYMKCGSSEDWMHQSNDKLEAG 151 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~ 151 (628)
.++|.|||++|+|+.|++.+.+.++..
T Consensus 705 vMIiTEyMENGsLDsFLR~~DGqftvi 731 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQNDGQFTVI 731 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhcCCceEee
Confidence 899999999999999999888666543
No 41
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.34 E-value=1.4e-12 Score=135.65 Aligned_cols=178 Identities=33% Similarity=0.519 Sum_probs=86.3
Q ss_pred cccEEEccCCcceeeCchhhhccC-CcCeeeeccccccccCCcCCCCCCCCCeEecccCccccccCccccCCCCCCeEec
Q 042887 363 KITVIGMGDNQISGTIPSEIKNLV-NINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFL 441 (628)
Q Consensus 363 ~L~~L~l~~n~l~~~~~~~l~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 441 (628)
.++.+++.+|.++. ++.....+. +|+.|++++|++. .+|..+..+++|+.|++++|++. ..|......+.|+.|++
T Consensus 117 ~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 117 NLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred ceeEEecCCccccc-Cccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 45555555555552 233333332 5555555555555 23344555555555555555555 23333334555555555
Q ss_pred CCcccccccCCcccCCcchhcccceEEcCCCcCccccchhhhccCCCCEeeCcCCcCcccCCccccCCCCCCeEECcCce
Q 042887 442 GFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSIPLEVGNLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNS 521 (628)
Q Consensus 442 ~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 521 (628)
++|+++ .+|........| +.+++++|.+. ..+..+..+.++..+.+++|++. ..+..+..++++++|++++|.
T Consensus 194 s~N~i~-~l~~~~~~~~~L----~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~ 266 (394)
T COG4886 194 SGNKIS-DLPPEIELLSAL----EELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQ 266 (394)
T ss_pred cCCccc-cCchhhhhhhhh----hhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceecccccc
Confidence 555555 333332222233 44455555322 23444455555555555555554 224444555555555555555
Q ss_pred eeeecCccccCCCCCCEEECCCCcccccCch
Q 042887 522 FSGSLPLSLKTLKSIKELDLSRNNLSGQIPK 552 (628)
Q Consensus 522 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 552 (628)
++.. +. +..+.+++.|++++|.+...+|.
T Consensus 267 i~~i-~~-~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 267 ISSI-SS-LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred cccc-cc-ccccCccCEEeccCccccccchh
Confidence 5522 22 45555555555555555544333
No 42
>PLN03150 hypothetical protein; Provisional
Probab=99.33 E-value=2.1e-12 Score=140.33 Aligned_cols=118 Identities=34% Similarity=0.546 Sum_probs=92.8
Q ss_pred CCCEeeCcCCcCcccCCccccCCCCCCeEECcCceeeeecCccccCCCCCCEEECCCCcccccCchhhhcccCCCeEecc
Q 042887 487 NLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRNNLSGQIPKYLENLLFLAYLNLS 566 (628)
Q Consensus 487 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls 566 (628)
.++.|+|++|.+.+.+|..+..+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|++++.+|+.+.++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 36778888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCcCcccCCCC--CCCCCCCcccccCCCCCcccCCCCCCCCCC
Q 042887 567 YNHFEGEVPRK--GVFGNRTGIHLIGNERLCGGLEELHLPSCH 607 (628)
Q Consensus 567 ~N~l~~~~p~~--~~~~~l~~~~~~~n~~~c~~~~~l~l~~c~ 607 (628)
+|+++|.+|.. ....++..+++.+|+.+|+. +. ++.|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~-p~--l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGI-PG--LRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCC-CC--CCCCc
Confidence 88888888753 22334567888999999974 32 46675
No 43
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.33 E-value=1.3e-13 Score=125.94 Aligned_cols=94 Identities=22% Similarity=0.356 Sum_probs=79.0
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
..+|++.+.||+|+||.||++.+..+|+.+|.|.++-. +.........|+.+|++++|||||++++... .++..-
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f---~~~~ev 94 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSF---IEDNEV 94 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhh---hccchh
Confidence 45688999999999999999999999999999998743 3445677899999999999999999988432 123444
Q ss_pred eeeeecccccCCchhhhhc
Q 042887 125 KALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~ 143 (628)
.++|||||.+|||.++++.
T Consensus 95 lnivmE~c~~GDLsqmIk~ 113 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKH 113 (375)
T ss_pred hHHHHHhhcccCHHHHHHH
Confidence 8999999999999998853
No 44
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.31 E-value=8.7e-13 Score=131.88 Aligned_cols=97 Identities=27% Similarity=0.459 Sum_probs=82.3
Q ss_pred HHHHHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccc
Q 042887 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDF 119 (628)
Q Consensus 40 ~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 119 (628)
.+.+...++.+.+.+.||+|.||.||.|.+. ....||+|.++... ...+.|.+|+.+|++++|++||+++++|..
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~--- 272 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTK--- 272 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEec---
Confidence 4556666677788899999999999999993 23479999997653 345789999999999999999999999874
Q ss_pred cccceeeeeecccccCCchhhhhc
Q 042887 120 KGVDFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~ 143 (628)
....|||||||+.|+|.+|+++
T Consensus 273 --~~piyIVtE~m~~GsLl~yLr~ 294 (468)
T KOG0197|consen 273 --QEPIYIVTEYMPKGSLLDYLRT 294 (468)
T ss_pred --CCceEEEEEecccCcHHHHhhh
Confidence 4579999999999999999987
No 45
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.31 E-value=3.6e-13 Score=125.99 Aligned_cols=103 Identities=23% Similarity=0.425 Sum_probs=81.9
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
.+.|+...+|++|+||.||+|+++++++.||+|+++... .+-.=...|||.++.+.+|||||.+.++... ...+.
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG---~~~d~ 151 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVG---SNMDK 151 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEec---cccce
Confidence 457888999999999999999999999999999997653 2333356899999999999999999887653 33567
Q ss_pred eeeeecccccCCchhhhhccccccccccC
Q 042887 125 KALIYEYMKCGSSEDWMHQSNDKLEAGNL 153 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~ 153 (628)
+|||||||+. ||...|..-...+..+.+
T Consensus 152 iy~VMe~~Eh-DLksl~d~m~q~F~~~ev 179 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMETMKQPFLPGEV 179 (419)
T ss_pred eeeeHHHHHh-hHHHHHHhccCCCchHHH
Confidence 9999999985 787777655544443333
No 46
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.30 E-value=1.2e-12 Score=117.13 Aligned_cols=94 Identities=26% Similarity=0.371 Sum_probs=83.9
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
.++|++.+.+|+|.||.||.|+.++++-.||+|++.+.. .+...++.||+++-++++||||+++++. |.+..
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~-----fhd~~ 95 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGY-----FHDSK 95 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhh-----eeccc
Confidence 578999999999999999999999999999999997653 4556789999999999999999999999 55689
Q ss_pred eeeeeecccccCCchhhhhccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
..|+++||.++|++...+....
T Consensus 96 riyLilEya~~gel~k~L~~~~ 117 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEGR 117 (281)
T ss_pred eeEEEEEecCCchHHHHHHhcc
Confidence 9999999999999998887544
No 47
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.30 E-value=3.1e-12 Score=133.10 Aligned_cols=147 Identities=29% Similarity=0.428 Sum_probs=67.6
Q ss_pred EEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCC-CCCEeecccccCcccCCcCccCCCCCCEEEeecc
Q 042887 166 MIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLR-SLNYLSISENNFSCKLPLSIWNISSLEIISLHSN 244 (628)
Q Consensus 166 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n 244 (628)
.++++.|.+.. ....+..++.++.|++.+|.++ .++.....+. +|+.|++++|.+. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 34444444432 2222334455555555555554 3333444442 5555555555554 33444555555555555555
Q ss_pred cCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCCcC
Q 042887 245 RFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNNL 319 (628)
Q Consensus 245 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l 319 (628)
+++ .+|.... .+++|+.|++++|+++ .+|........|++|.+++|++. ..+..+..+.++..+.+.+|++
T Consensus 174 ~l~-~l~~~~~-~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~ 244 (394)
T COG4886 174 DLS-DLPKLLS-NLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKL 244 (394)
T ss_pred hhh-hhhhhhh-hhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCcee
Confidence 554 4444332 2455555555555555 33333333444555555555322 1222344444444444444444
No 48
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.30 E-value=2.1e-12 Score=126.41 Aligned_cols=93 Identities=27% Similarity=0.405 Sum_probs=73.9
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHH--HhhcCCCCcccccceeeeccccccce
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEA--LSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~--l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
....++.+.||+|.||+||+|.. +++.||||++...+. +.|..|-++ +-.++|+||++++++....+-. ...
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~k---qs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-~~e 282 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQEK---QSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-RME 282 (534)
T ss_pred CCchhhHHHhhcCccceeehhhc--cCceeEEEecCHHHH---HHHHhHHHHHhccCccchhHHHhhchhccCCcc-ccc
Confidence 44567778999999999999999 779999999976543 556666555 4566899999999986553322 457
Q ss_pred eeeeecccccCCchhhhhccc
Q 042887 125 KALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.++|+||.+.|+|.+|++.+-
T Consensus 283 ywLVt~fh~kGsL~dyL~~nt 303 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKANT 303 (534)
T ss_pred eeEEeeeccCCcHHHHHHhcc
Confidence 899999999999999997654
No 49
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.29 E-value=3e-12 Score=128.24 Aligned_cols=91 Identities=35% Similarity=0.594 Sum_probs=76.2
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcE-EEEEEeeccccc--hhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTT-VAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~-~avK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
..+....+.+|+|+||+||+|.+ .|+. ||+|++...... ..++|.+|+.+|.+++|||||+++++|.+ ..
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~-----~~ 112 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTS-----PP 112 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC-----CC
Confidence 34455667799999999999999 5666 999999765422 25689999999999999999999999875 33
Q ss_pred -eeeeeecccccCCchhhhhcc
Q 042887 124 -FKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 124 -~~~lv~e~~~~g~L~~~l~~~ 144 (628)
...+||||+++|+|.+++...
T Consensus 113 ~~~~iVtEy~~~GsL~~~l~~~ 134 (362)
T KOG0192|consen 113 GSLCIVTEYMPGGSLSVLLHKK 134 (362)
T ss_pred CceEEEEEeCCCCcHHHHHhhc
Confidence 689999999999999999774
No 50
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.28 E-value=1.1e-13 Score=127.28 Aligned_cols=115 Identities=20% Similarity=0.308 Sum_probs=93.0
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
.+-|.+.+.+|+|+||.||+|.++++|+.+|||.+.... +.+.+..|+.+|++.+.|+||++++.+ ......|
T Consensus 32 EEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSY-----FK~sDLW 104 (502)
T KOG0574|consen 32 EEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSY-----FKHSDLW 104 (502)
T ss_pred HHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhh-----ccCCceE
Confidence 345777889999999999999999999999999987643 457789999999999999999999984 4477899
Q ss_pred eeecccccCCchhhhhccccccccccCCccccCCcCcccEEE
Q 042887 127 LIYEYMKCGSSEDWMHQSNDKLEAGNLGLIQRLNLLKLEMID 168 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~l~~L~~L~ 168 (628)
+|||||-.|+..+.++.+++.+.+-....+-...++.|++|+
T Consensus 105 IVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH 146 (502)
T KOG0574|consen 105 IVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLH 146 (502)
T ss_pred eehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999888877765444444333444455443
No 51
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.28 E-value=6.6e-13 Score=128.70 Aligned_cols=194 Identities=21% Similarity=0.235 Sum_probs=136.9
Q ss_pred ccCCcCcccEEEccCCccccccc-hhhhCCCCCCEEecccCcCccccc--ccccCCCCCCEeecccccCcccCCcC-ccC
Q 042887 157 QRLNLLKLEMIDVGDNQLIGKFP-DFIANFSALEAIDISANMLGGRIP--DSLCQLRSLNYLSISENNFSCKLPLS-IWN 232 (628)
Q Consensus 157 ~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~l~~L~~L~Ls~N~i~~~~p~~-~~~ 232 (628)
.-.++.+|+.+.|.+..+..... .....+++++.||||.|-++...+ .-...|++|+.|+|+.|.+....... -..
T Consensus 116 kQsn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 116 KQSNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred HhhhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhh
Confidence 34678889999999888753222 467789999999999998874432 33568999999999999987433222 236
Q ss_pred CCCCCEEEeecccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeec-ccccccCCCCCE
Q 042887 233 ISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQV-KIDFNRLSNLSR 311 (628)
Q Consensus 233 l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~-~~~~~~l~~L~~ 311 (628)
+++|+.|.|+.|.++..--..+...+|+|+.|+|.+|............+..|++|||++|++-... -...+.++.|..
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhh
Confidence 7889999999999874333333446899999999999644455556677888999999999886433 134567888888
Q ss_pred EEccCCcCCCcCCCCccccccccCCCCCceeecccCCcc
Q 042887 312 LFLSKNNLGTESTSDLDFLTLLTNCSQMEMLYLNTNKFG 350 (628)
Q Consensus 312 L~L~~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~ 350 (628)
|+++.+.+.++...+.+.......+++|++|+++.|++.
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 999988887765444333333445566666666666553
No 52
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.28 E-value=3.2e-12 Score=113.52 Aligned_cols=129 Identities=22% Similarity=0.296 Sum_probs=44.0
Q ss_pred hhCCCCCCEEecccCcCccccccccc-CCCCCCEeecccccCcccCCcCccCCCCCCEEEeecccCcccCChhhhhCCCC
Q 042887 182 IANFSALEAIDISANMLGGRIPDSLC-QLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPN 260 (628)
Q Consensus 182 ~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~ 260 (628)
+.+..++++|+|++|.|+.+ +.++ .+.+|+.|+|++|.|+. ++ .+..+++|++|++++|.++ .++..+...+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 33455677777777777633 2344 46777777777777773 32 4667777777777777777 565544434777
Q ss_pred CcEEecccCccccccc-ccccCCCCCCEEEcccccceeec---ccccccCCCCCEEEcc
Q 042887 261 VNFLSVGQNNFTGSLP-HSFSNASNLQVLDVYKNHFSGQV---KIDFNRLSNLSRLFLS 315 (628)
Q Consensus 261 L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~l~~L~~L~L~ 315 (628)
|++|++++|+|..... ..++.+++|+.|++.+|.++... ...+..+|+|+.||-.
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 7777777777764322 34666777777777777775331 1134566777777643
No 53
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.27 E-value=1.8e-12 Score=133.31 Aligned_cols=101 Identities=26% Similarity=0.409 Sum_probs=82.7
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc-ccchhhhHHHHHHHHhhcCCCCcccccceeeecc-cccccee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK-QKGAAKSFVTECEALSNVRHRNLIKIITVCSSID-FKGVDFK 125 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~~~~~ 125 (628)
..|...+.+|+||||-||+|+++++|+.||||..+.. ....+++..+|+++|++++|||||+++++..... ....+..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 3466678999999999999999999999999999764 3456678999999999999999999999854310 1124567
Q ss_pred eeeecccccCCchhhhhcccccc
Q 042887 126 ALIYEYMKCGSSEDWMHQSNDKL 148 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~~ 148 (628)
.++||||+||||...+.+..+.+
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~ 115 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAY 115 (732)
T ss_pred eEEEeecCCCcHHHHhcCccccc
Confidence 88999999999999998766443
No 54
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.27 E-value=4.6e-12 Score=116.85 Aligned_cols=94 Identities=23% Similarity=0.321 Sum_probs=83.9
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
.++|+..+.+|.|+||+|..++.+.+|.+||+|++++.. ..+.+....|..+|+.+.||.++++.+.+ .+.+
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~-----~d~~ 117 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF-----KDNS 117 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee-----ccCC
Confidence 457889999999999999999999999999999998753 34567788999999999999999999884 5589
Q ss_pred eeeeeecccccCCchhhhhccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
..||||||++||.+..++++.+
T Consensus 118 ~lymvmeyv~GGElFS~Lrk~~ 139 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLRKSG 139 (355)
T ss_pred eEEEEEeccCCccHHHHHHhcC
Confidence 9999999999999999998765
No 55
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.27 E-value=7.8e-12 Score=126.52 Aligned_cols=99 Identities=25% Similarity=0.410 Sum_probs=83.5
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc----cc-chhhhHHHHHHHHhhcC-CCCcccccceeeeccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK----QK-GAAKSFVTECEALSNVR-HRNLIKIITVCSSIDF 119 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~ 119 (628)
..+.|.+.+.||+|+||+|+.|.+..+|+.||+|+++.. .. ...+.+.||+.+++.++ ||||++++++.
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~----- 89 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVF----- 89 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEE-----
Confidence 457899999999999999999999999999999987653 11 23456778999999999 99999999994
Q ss_pred cccceeeeeecccccCCchhhhhcccccccc
Q 042887 120 KGVDFKALIYEYMKCGSSEDWMHQSNDKLEA 150 (628)
Q Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~ 150 (628)
.+....|+|||||.||+|.+++.+ .+.+.+
T Consensus 90 ~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E 119 (370)
T KOG0583|consen 90 ATPTKIYIVMEYCSGGDLFDYIVN-KGRLKE 119 (370)
T ss_pred ecCCeEEEEEEecCCccHHHHHHH-cCCCCh
Confidence 457779999999999999999988 444433
No 56
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.27 E-value=1.5e-12 Score=110.94 Aligned_cols=99 Identities=23% Similarity=0.457 Sum_probs=83.6
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|.-.+.||+|.||+||+|+..++++.||+|.++..+ ++......||+.++++++|.|||+++++ .+.++..-
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dv-----lhsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV-----LHSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhh-----hccCceeE
Confidence 4666678999999999999999999999999998753 4566788999999999999999999999 55688999
Q ss_pred eeecccccCCchhhhhccccccccccC
Q 042887 127 LIYEYMKCGSSEDWMHQSNDKLEAGNL 153 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~~~~~~~~~~ 153 (628)
+|+|||.. ++..|+..-++.++....
T Consensus 78 lvfe~cdq-dlkkyfdslng~~d~~~~ 103 (292)
T KOG0662|consen 78 LVFEFCDQ-DLKKYFDSLNGDLDPEIV 103 (292)
T ss_pred EeHHHhhH-HHHHHHHhcCCcCCHHHH
Confidence 99999974 788888777766654433
No 57
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.26 E-value=2.6e-12 Score=129.28 Aligned_cols=101 Identities=24% Similarity=0.447 Sum_probs=90.1
Q ss_pred HHHHHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccc
Q 042887 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDF 119 (628)
Q Consensus 40 ~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 119 (628)
++.|+..+.+..+...+|-|.||.||.|.|++....||||.++... ...+.|..|+.+|+.++|||+|+++++|+.
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~--- 334 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTH--- 334 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhcc---
Confidence 4678777888888899999999999999999999999999987543 356889999999999999999999999986
Q ss_pred cccceeeeeecccccCCchhhhhcccc
Q 042887 120 KGVDFKALIYEYMKCGSSEDWMHQSND 146 (628)
Q Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~ 146 (628)
...+|+|+|||..|.|.+|+++.+.
T Consensus 335 --EpPFYIiTEfM~yGNLLdYLRecnr 359 (1157)
T KOG4278|consen 335 --EPPFYIITEFMCYGNLLDYLRECNR 359 (1157)
T ss_pred --CCCeEEEEecccCccHHHHHHHhch
Confidence 6789999999999999999987653
No 58
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.25 E-value=5.3e-13 Score=125.93 Aligned_cols=133 Identities=23% Similarity=0.377 Sum_probs=76.0
Q ss_pred CCCCeEecccCccccc----cCccccCCCCCCeEecCCccccccc----CCcccCCcchhcccceEEcCCCcCccc----
Q 042887 410 KNLQGLALVRNSLRGT----IPDTLGNLTLLNRLFLGFNNLQGNV----PSSLGNCQNLMTLSRLLDLSGNLLGGS---- 477 (628)
Q Consensus 410 ~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~l~~~L~Ls~N~l~~~---- 477 (628)
+.|+++...+|++... +...|...+.|+.+.++.|.|.... ...+..+++| +.|||.+|-++..
T Consensus 157 ~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~L----evLdl~DNtft~egs~~ 232 (382)
T KOG1909|consen 157 PKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHL----EVLDLRDNTFTLEGSVA 232 (382)
T ss_pred cceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcc----eeeecccchhhhHHHHH
Confidence 4566666666655421 2233455566666666666654221 1234455555 6666666666532
Q ss_pred cchhhhccCCCCEeeCcCCcCcccCCccc-----cCCCCCCeEECcCceeee----ecCccccCCCCCCEEECCCCcc
Q 042887 478 IPLEVGNLRNLAEFDLSENHFSNEIPVTL-----SACTTLEYLHLQGNSFSG----SLPLSLKTLKSIKELDLSRNNL 546 (628)
Q Consensus 478 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l 546 (628)
+...++.+++|++|++++|.+...-...+ ...|+|+.|.+.+|.|+. .+..++...+.|+.|+|++|.+
T Consensus 233 LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 233 LAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 23445566777777777777765433332 235677777777777763 2223344567777777777777
No 59
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.24 E-value=1.3e-11 Score=121.06 Aligned_cols=94 Identities=24% Similarity=0.329 Sum_probs=78.9
Q ss_pred HHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---------c-----chhhhHHHHHHHHhhcCCCCccc
Q 042887 44 SKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---------K-----GAAKSFVTECEALSNVRHRNLIK 109 (628)
Q Consensus 44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---------~-----~~~~~~~~E~~~l~~l~h~nIv~ 109 (628)
....++|++.+.||+|.||+|-+|+...+++.||||++.+.. . ...+...+||.+|+++.|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 345678999999999999999999999999999999997632 1 12357899999999999999999
Q ss_pred ccceeeeccccccceeeeeecccccCCchhh
Q 042887 110 IITVCSSIDFKGVDFKALIYEYMKCGSSEDW 140 (628)
Q Consensus 110 l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 140 (628)
++++-.+ .....+|||+|||..|.+.+.
T Consensus 173 LiEvLDD---P~s~~~YlVley~s~G~v~w~ 200 (576)
T KOG0585|consen 173 LIEVLDD---PESDKLYLVLEYCSKGEVKWC 200 (576)
T ss_pred EEEeecC---cccCceEEEEEeccCCccccC
Confidence 9998554 346789999999999987643
No 60
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.24 E-value=1.5e-12 Score=127.59 Aligned_cols=106 Identities=26% Similarity=0.418 Sum_probs=88.0
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcC-CCCcccccceeeeccccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~ 123 (628)
..++|.+.+.+|.|+||.||+|+...+|+.||||.++... .+..-.-.||+..|+++. |||||++.++..+ ...
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d----~~~ 83 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRD----NDR 83 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhc----cCc
Confidence 4578999999999999999999999999999999997653 444455689999999998 9999999999643 233
Q ss_pred eeeeeecccccCCchhhhhccccccccccCCcc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSNDKLEAGNLGLI 156 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 156 (628)
..|+|||||++ .|++.|+++++.+++..+-.+
T Consensus 84 ~L~fVfE~Md~-NLYqLmK~R~r~fse~~irni 115 (538)
T KOG0661|consen 84 ILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNI 115 (538)
T ss_pred eEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHH
Confidence 89999999986 799999998777666555443
No 61
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.23 E-value=7.4e-12 Score=116.48 Aligned_cols=87 Identities=21% Similarity=0.384 Sum_probs=80.7
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcC-CCCcccccceeeeccccccceeeeeeccc
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVDFKALIYEYM 132 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 132 (628)
+.+|+|+||.|-.++...+|..||||++.+.......++.||++++...+ |+||++++++ |+++..+|+|||-|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLief-----FEdd~~FYLVfEKm 158 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEF-----FEDDTRFYLVFEKM 158 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHH-----hcccceEEEEEecc
Confidence 67999999999999999999999999999887778889999999999996 9999999999 77899999999999
Q ss_pred ccCCchhhhhccc
Q 042887 133 KCGSSEDWMHQSN 145 (628)
Q Consensus 133 ~~g~L~~~l~~~~ 145 (628)
.||.+..+|.++.
T Consensus 159 ~GGplLshI~~~~ 171 (463)
T KOG0607|consen 159 RGGPLLSHIQKRK 171 (463)
T ss_pred cCchHHHHHHHhh
Confidence 9999999987654
No 62
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.23 E-value=1.5e-11 Score=124.32 Aligned_cols=94 Identities=23% Similarity=0.384 Sum_probs=83.7
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc---chhhhHHHHHHHHhhcC-CCCcccccceeeeccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK---GAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKG 121 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~ 121 (628)
....|++.+.+|+|.||.||+|+.+.+|+.+|+|.+.+... ...+.+.+|+.+|+++. |||||+++++ |++
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~-----~e~ 107 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDA-----FED 107 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEE-----EEc
Confidence 45679999999999999999999999999999999976543 23468899999999998 9999999999 566
Q ss_pred cceeeeeecccccCCchhhhhcc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
....++|||+|.||+|.+.+...
T Consensus 108 ~~~~~lvmEL~~GGeLfd~i~~~ 130 (382)
T KOG0032|consen 108 PDSVYLVMELCEGGELFDRIVKK 130 (382)
T ss_pred CCeEEEEEEecCCchHHHHHHHc
Confidence 88999999999999999998765
No 63
>PLN03150 hypothetical protein; Provisional
Probab=99.22 E-value=2.3e-11 Score=132.24 Aligned_cols=107 Identities=28% Similarity=0.496 Sum_probs=73.4
Q ss_pred ccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEEEeec
Q 042887 164 LEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHS 243 (628)
Q Consensus 164 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~ 243 (628)
++.|+|++|.+.+.+|..++.+++|+.|+|++|.+.+.+|..++.+++|+.|+|++|++++.+|..++++++|++|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 66677777777777777777777777777777777767777777777777777777777766777777777777777777
Q ss_pred ccCcccCChhhhhCCCCCcEEecccCc
Q 042887 244 NRFEGSLPLNIGFNIPNVNFLSVGQNN 270 (628)
Q Consensus 244 n~l~~~~~~~~~~~l~~L~~L~L~~N~ 270 (628)
|.+++.+|..+.....++..+++.+|.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCc
Confidence 777766666655433445555555554
No 64
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.21 E-value=1.4e-12 Score=123.20 Aligned_cols=68 Identities=19% Similarity=0.364 Sum_probs=36.6
Q ss_pred hhhhCCCCCCEEecccCcCcccc----cccccCCCCCCEeeccccc---CcccCCcC-------ccCCCCCCEEEeeccc
Q 042887 180 DFIANFSALEAIDISANMLGGRI----PDSLCQLRSLNYLSISENN---FSCKLPLS-------IWNISSLEIISLHSNR 245 (628)
Q Consensus 180 ~~~~~l~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~Ls~N~---i~~~~p~~-------~~~l~~L~~L~L~~n~ 245 (628)
+....+..++.++||+|.+...- ...+.+.++|+..++|+-- ....+|.+ +...++|++||||.|.
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 34556677777777777775332 2334556677777766431 11122322 2334456666666665
Q ss_pred Cc
Q 042887 246 FE 247 (628)
Q Consensus 246 l~ 247 (628)
+.
T Consensus 104 ~G 105 (382)
T KOG1909|consen 104 FG 105 (382)
T ss_pred cC
Confidence 54
No 65
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.21 E-value=1.9e-11 Score=124.00 Aligned_cols=100 Identities=23% Similarity=0.349 Sum_probs=86.9
Q ss_pred HHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc--chhhhHHHHHHHHhhcCCCCcccccceeeeccccc
Q 042887 44 SKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK--GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKG 121 (628)
Q Consensus 44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 121 (628)
......|.+.+.||+|.||+|..|++..++..||||.+++..- .....+.+|+++|+.+.|||||+++.+ .++
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v-----~~t 126 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSV-----IET 126 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeee-----eee
Confidence 3446789999999999999999999999999999999987642 233458999999999999999999999 566
Q ss_pred cceeeeeecccccCCchhhhhcccccc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQSNDKL 148 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~ 148 (628)
....|+||||+.+|++++|+..++...
T Consensus 127 ~~~lylV~eya~~ge~~~yl~~~gr~~ 153 (596)
T KOG0586|consen 127 EATLYLVMEYASGGELFDYLVKHGRMK 153 (596)
T ss_pred cceeEEEEEeccCchhHHHHHhcccch
Confidence 899999999999999999998776443
No 66
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.20 E-value=1.6e-11 Score=109.11 Aligned_cols=126 Identities=27% Similarity=0.252 Sum_probs=39.0
Q ss_pred CCCCCCeEecCCcccccccCCccc-CCcchhcccceEEcCCCcCccccchhhhccCCCCEeeCcCCcCcccCCccc-cCC
Q 042887 432 NLTLLNRLFLGFNNLQGNVPSSLG-NCQNLMTLSRLLDLSGNLLGGSIPLEVGNLRNLAEFDLSENHFSNEIPVTL-SAC 509 (628)
Q Consensus 432 ~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l 509 (628)
+...+++|+|++|.|+.. +.++ .+.+| +.|++++|.|+.. ..+..+++|++|++++|+|+.. ...+ ..+
T Consensus 17 n~~~~~~L~L~~n~I~~I--e~L~~~l~~L----~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i-~~~l~~~l 87 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTI--ENLGATLDKL----EVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSI-SEGLDKNL 87 (175)
T ss_dssp ---------------------S--TT-TT------EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-
T ss_pred cccccccccccccccccc--cchhhhhcCC----CEEECCCCCCccc--cCccChhhhhhcccCCCCCCcc-ccchHHhC
Confidence 334556666666666521 1222 23334 5566666666532 2355566777777777777633 2223 346
Q ss_pred CCCCeEECcCceeeeecC-ccccCCCCCCEEECCCCcccccC---chhhhcccCCCeEecc
Q 042887 510 TTLEYLHLQGNSFSGSLP-LSLKTLKSIKELDLSRNNLSGQI---PKYLENLLFLAYLNLS 566 (628)
Q Consensus 510 ~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~---~~~~~~l~~L~~L~ls 566 (628)
++|++|++++|+|..... ..+..+++|+.|+|.+|+++... ...+..+|+|+.||-.
T Consensus 88 p~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 88 PNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred CcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 677777777777663211 34556777777777777776321 1135667777777643
No 67
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.19 E-value=1.3e-11 Score=123.84 Aligned_cols=96 Identities=28% Similarity=0.475 Sum_probs=83.0
Q ss_pred HHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 44 SKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
+.++....+.+.||+|.||.|..|+. ..+..||+|+++... ......|.+|+++|.+++|||||+++++|.. +
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~-----D 607 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ-----D 607 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec-----C
Confidence 34556677889999999999999998 346899999998764 3445889999999999999999999999985 7
Q ss_pred ceeeeeecccccCCchhhhhccc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
+...+++|||++|+|.+|+..+.
T Consensus 608 ePicmI~EYmEnGDLnqFl~ahe 630 (807)
T KOG1094|consen 608 DPLCMITEYMENGDLNQFLSAHE 630 (807)
T ss_pred CchHHHHHHHhcCcHHHHHHhcc
Confidence 78899999999999999997764
No 68
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.19 E-value=1.8e-11 Score=118.13 Aligned_cols=97 Identities=27% Similarity=0.325 Sum_probs=84.2
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
+.|++.+.+|.|.-|.||+++...++..+|+|++.+.. +....+...|.+||+.++||.++.++.. |++.++
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~-----fet~~~ 151 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYAS-----FETDKY 151 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhe-----eeccce
Confidence 46778899999999999999999999999999998753 4445677889999999999999999998 677999
Q ss_pred eeeeecccccCCchhhhhccccccc
Q 042887 125 KALIYEYMKCGSSEDWMHQSNDKLE 149 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~ 149 (628)
.+++||||+||+|+....+...++.
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp~~~f 176 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQPGKRF 176 (459)
T ss_pred eEEEEecCCCccHHHHHhhCCCCcc
Confidence 9999999999999988876665543
No 69
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.19 E-value=6.9e-12 Score=115.70 Aligned_cols=136 Identities=27% Similarity=0.236 Sum_probs=99.0
Q ss_pred ccCCCCCCeEecCCcccccccCCcccCCcchhcccceEEcCCCcCccccchhhhccCCCCEeeCcCCcCcccCCccccCC
Q 042887 430 LGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSIPLEVGNLRNLAEFDLSENHFSNEIPVTLSAC 509 (628)
Q Consensus 430 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 509 (628)
...+..|+.+||++|.|+ .+.++..-++.+ +.|++|+|+|.. ...+..+++|+.||||+|.++ .+..+-..+
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pki----r~L~lS~N~i~~--v~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KL 351 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKL----RRLILSQNRIRT--VQNLAELPQLQLLDLSGNLLA-ECVGWHLKL 351 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccce----eEEeccccceee--ehhhhhcccceEeecccchhH-hhhhhHhhh
Confidence 344567888888888887 555666666666 788888888873 234777888888888888887 344444567
Q ss_pred CCCCeEECcCceeeeecCccccCCCCCCEEECCCCcccccC-chhhhcccCCCeEeccCCcCcccCC
Q 042887 510 TTLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRNNLSGQI-PKYLENLLFLAYLNLSYNHFEGEVP 575 (628)
Q Consensus 510 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~ls~N~l~~~~p 575 (628)
-+++.|.|++|.|. .-..+..+-+|..||+++|+|.... -..++++|.|+++.|.+|++.+.+.
T Consensus 352 GNIKtL~La~N~iE--~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 352 GNIKTLKLAQNKIE--TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred cCEeeeehhhhhHh--hhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 78888888888875 2345677788888888888887432 2357788888888888888876554
No 70
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.19 E-value=3.5e-11 Score=124.02 Aligned_cols=92 Identities=22% Similarity=0.350 Sum_probs=80.0
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||+|++..+|+.||||++.... ......+.+|+++++.++||||+++++++ .+...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSF-----QDENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCe
Confidence 47899999999999999999999999999999997542 23445678899999999999999999884 45788
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.|+|||||++|+|.+++...
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~ 95 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKK 95 (364)
T ss_pred EEEEECCCCCcHHHHHHHHc
Confidence 99999999999999998654
No 71
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.19 E-value=4.6e-12 Score=116.87 Aligned_cols=130 Identities=25% Similarity=0.276 Sum_probs=78.5
Q ss_pred cCCcCeeeeccccccccCCcCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCcccccccCCcccCCcchhccc
Q 042887 385 LVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTLS 464 (628)
Q Consensus 385 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ 464 (628)
...|+++|+++|.|+ .+.++..-+|.++.|++|+|.++.. +.+..+++|+.|||++|.++ ....+-..+-+.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNI---- 354 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNI---- 354 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCE----
Confidence 344556666666665 3444555566666666666666622 23566666667777766665 233333333344
Q ss_pred ceEEcCCCcCccccchhhhccCCCCEeeCcCCcCcccC-CccccCCCCCCeEECcCceeee
Q 042887 465 RLLDLSGNLLGGSIPLEVGNLRNLAEFDLSENHFSNEI-PVTLSACTTLEYLHLQGNSFSG 524 (628)
Q Consensus 465 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~ 524 (628)
+.|.|++|.|.. -..+..+-+|..||+++|+|.... ...++++|.|+.+.|.+|.+.+
T Consensus 355 KtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 355 KTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred eeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 566777776652 224555667777777777776422 3456777888888888888773
No 72
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.18 E-value=4.6e-11 Score=118.88 Aligned_cols=93 Identities=20% Similarity=0.302 Sum_probs=79.9
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||+|.+..+|+.||+|++.... ....+.+.+|+.++++++||||+++++.+ .+...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTE-----HDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhh-----ccCCe
Confidence 46889999999999999999999899999999997532 23446688999999999999999999884 45788
Q ss_pred eeeeecccccCCchhhhhccc
Q 042887 125 KALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.|+||||+++|+|.+++....
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~ 96 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSG 96 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcC
Confidence 999999999999999986543
No 73
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.18 E-value=4.8e-11 Score=123.50 Aligned_cols=92 Identities=20% Similarity=0.302 Sum_probs=79.7
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++ .+...
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSF-----QDAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCe
Confidence 47889999999999999999999999999999986532 23446788999999999999999999984 45788
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.|+||||+++|+|.+++...
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~ 95 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKY 95 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhc
Confidence 99999999999999988643
No 74
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.18 E-value=4.9e-11 Score=115.84 Aligned_cols=104 Identities=30% Similarity=0.437 Sum_probs=85.4
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
..+|...+.||+|+||.||++.+.++|+.+|||.+........+.+.+|+.+|.+++|||||++++.... ......+
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~---~~~~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSS---RENDEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCcccc---ccCeeeE
Confidence 4457888999999999999999998899999999987643336778999999999999999999997432 1114789
Q ss_pred eeecccccCCchhhhhccccccccccC
Q 042887 127 LIYEYMKCGSSEDWMHQSNDKLEAGNL 153 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~~~~~~~~~~ 153 (628)
+.|||+++|++.+++.+.++.+++..+
T Consensus 93 i~mEy~~~GsL~~~~~~~g~~l~E~~v 119 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGGKLPEPLV 119 (313)
T ss_pred eeeeccCCCcHHHHHHHcCCCCCHHHH
Confidence 999999999999999887755554433
No 75
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.17 E-value=1.9e-11 Score=123.45 Aligned_cols=109 Identities=25% Similarity=0.415 Sum_probs=91.7
Q ss_pred CCCCcccHHHHHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccc
Q 042887 33 QQFPMVSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKI 110 (628)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l 110 (628)
......+..+|....+.+.+..+||+|+||+||+|+|-.+ ||||++.... ....+.|..|+.++++.+|.||+-+
T Consensus 377 ~r~~s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLF 453 (678)
T KOG0193|consen 377 NRQASDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLF 453 (678)
T ss_pred cccCCccccccccCHHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheee
Confidence 3445556678888888999999999999999999999544 9999997653 4467889999999999999999999
Q ss_pred cceeeeccccccceeeeeecccccCCchhhhhcccccccc
Q 042887 111 ITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEA 150 (628)
Q Consensus 111 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~ 150 (628)
.++|+. ..+.+|+.+|+|.+|+.+++....+++.
T Consensus 454 MG~~~~------p~~AIiTqwCeGsSLY~hlHv~etkfdm 487 (678)
T KOG0193|consen 454 MGACMN------PPLAIITQWCEGSSLYTHLHVQETKFDM 487 (678)
T ss_pred ehhhcC------CceeeeehhccCchhhhhccchhhhhhH
Confidence 999873 4448999999999999999887766654
No 76
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.17 E-value=5.6e-11 Score=123.08 Aligned_cols=91 Identities=18% Similarity=0.238 Sum_probs=79.4
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++. +....
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~-----~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQ-----DKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe-----cCCEE
Confidence 5888899999999999999999999999999997542 334567889999999999999999999854 47789
Q ss_pred eeeecccccCCchhhhhcc
Q 042887 126 ALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~ 144 (628)
|+||||+++|+|.+++...
T Consensus 77 ~lv~E~~~gg~L~~~l~~~ 95 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRM 95 (381)
T ss_pred EEEEecCCCCcHHHHHHhc
Confidence 9999999999999988654
No 77
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=2.6e-11 Score=123.69 Aligned_cols=96 Identities=21% Similarity=0.363 Sum_probs=85.4
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
.+.|++++.+|+|+.|+|-.|++.+||+.+|||++.+.. ......+.+|+-+|+-+.||||++++++ |++..
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydV-----we~~~ 85 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDV-----WENKQ 85 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeee-----eccCc
Confidence 467999999999999999999999999999999997652 3345678999999999999999999999 56789
Q ss_pred eeeeeecccccCCchhhhhccccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSNDK 147 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~ 147 (628)
..|+|.||+++|.|++++.+++..
T Consensus 86 ~lylvlEyv~gGELFdylv~kG~l 109 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRKGPL 109 (786)
T ss_pred eEEEEEEecCCchhHHHHHhhCCC
Confidence 999999999999999999877643
No 78
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.16 E-value=6.4e-11 Score=122.57 Aligned_cols=92 Identities=18% Similarity=0.253 Sum_probs=79.8
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
.+|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|++++++++||||+++++.+ .....
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF-----QDKDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCE
Confidence 36899999999999999999999999999999986532 23446688999999999999999999884 45789
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.|+|||||++|+|.+++.+.
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~ 95 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRL 95 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhc
Confidence 99999999999999998654
No 79
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.15 E-value=6.9e-11 Score=119.79 Aligned_cols=93 Identities=18% Similarity=0.303 Sum_probs=80.8
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++. ..+
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~ 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ-----DEN 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-----cCC
Confidence 467999999999999999999999999999999997542 234467889999999999999999999854 478
Q ss_pred eeeeeecccccCCchhhhhcc
Q 042887 124 FKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~ 144 (628)
..|+||||+++|+|.+++...
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~~ 112 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRKA 112 (329)
T ss_pred EEEEEEcCCCCChHHHHHHHc
Confidence 899999999999999988654
No 80
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.15 E-value=4.4e-12 Score=123.08 Aligned_cols=232 Identities=18% Similarity=0.142 Sum_probs=153.6
Q ss_pred EEccCCccccccchhh----hCCCCCCEEecccCcCccccc--ccccCCCCCCEeecccccCcccC--CcCccCCCCCCE
Q 042887 167 IDVGDNQLIGKFPDFI----ANFSALEAIDISANMLGGRIP--DSLCQLRSLNYLSISENNFSCKL--PLSIWNISSLEI 238 (628)
Q Consensus 167 L~Ls~n~l~~~~~~~~----~~l~~L~~L~Ls~n~l~~~~~--~~~~~l~~L~~L~Ls~N~i~~~~--p~~~~~l~~L~~ 238 (628)
+.+++-++...--+.+ +++++|++..|.+.... ..+ .....+++++.||||+|-+.... ..-...+++|+.
T Consensus 98 ~si~nK~vE~iGfDki~akQsn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~ 176 (505)
T KOG3207|consen 98 LSISNKQVEFIGFDKIAAKQSNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLEN 176 (505)
T ss_pred hhhcCceeEEecHHHHHHHhhhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchh
Confidence 3444444444433333 47889999999998876 333 36778999999999999877432 233567999999
Q ss_pred EEeecccCcccCChhhhhCCCCCcEEecccCcccccc-cccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCC
Q 042887 239 ISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSL-PHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKN 317 (628)
Q Consensus 239 L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n 317 (628)
|+|+.|.+..-........++.|+.|.|+.|.++... ......+++|+.|+|..|....+......-+..|++|||++|
T Consensus 177 LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N 256 (505)
T KOG3207|consen 177 LNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNN 256 (505)
T ss_pred cccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCC
Confidence 9999999974333334445899999999999998533 234567899999999999644455556667889999999999
Q ss_pred cCCCcCCCCccccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeecccc
Q 042887 318 NLGTESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQ 397 (628)
Q Consensus 318 ~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 397 (628)
++-+.+ .......++.|+.|.++.+.+..+...... . -+-....++|++|++..|+
T Consensus 257 ~li~~~-----~~~~~~~l~~L~~Lnls~tgi~si~~~d~~-------s------------~~kt~~f~kL~~L~i~~N~ 312 (505)
T KOG3207|consen 257 NLIDFD-----QGYKVGTLPGLNQLNLSSTGIASIAEPDVE-------S------------LDKTHTFPKLEYLNISENN 312 (505)
T ss_pred cccccc-----cccccccccchhhhhccccCcchhcCCCcc-------c------------hhhhcccccceeeecccCc
Confidence 987643 334567778888888888877543211110 0 0012334555666666665
Q ss_pred cccc-CCcCCCCCCCCCeEecccCccc
Q 042887 398 LTGT-IPHAIGELKNLQGLALVRNSLR 423 (628)
Q Consensus 398 l~~~-~~~~~~~l~~L~~L~L~~n~l~ 423 (628)
|.+. .-..+..+++|+.|.+..|.+.
T Consensus 313 I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 313 IRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred cccccccchhhccchhhhhhccccccc
Confidence 5321 1122344555666666666655
No 81
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.15 E-value=8.6e-11 Score=119.44 Aligned_cols=92 Identities=24% Similarity=0.406 Sum_probs=79.8
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++..++||||+++++++. ....
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-----~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ-----DDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE-----cCCE
Confidence 36899999999999999999999999999999997542 234567889999999999999999998854 4778
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.|+||||+++|+|.+++...
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~ 95 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNL 95 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHc
Confidence 99999999999999998643
No 82
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.14 E-value=9e-11 Score=120.72 Aligned_cols=92 Identities=21% Similarity=0.287 Sum_probs=79.6
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|+.++.+++||+|+++++.+ ++...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~-----~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF-----QDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCCe
Confidence 47899999999999999999999999999999997542 23345678899999999999999999884 45778
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.|+|||||++|+|.+++.+.
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~ 95 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKK 95 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhc
Confidence 99999999999999998654
No 83
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.14 E-value=1e-10 Score=118.73 Aligned_cols=93 Identities=23% Similarity=0.337 Sum_probs=80.0
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||+|++..+++.||+|++.+. .....+.+.+|+.++..++|+||+++++++ ++...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAF-----QDENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEE-----ecCCe
Confidence 4789999999999999999999999999999999753 223445688899999999999999999984 45788
Q ss_pred eeeeecccccCCchhhhhccc
Q 042887 125 KALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.|+||||+++|+|.+++.+..
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~ 96 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFE 96 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhc
Confidence 999999999999999986543
No 84
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.14 E-value=2.6e-11 Score=119.66 Aligned_cols=98 Identities=22% Similarity=0.322 Sum_probs=85.8
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc--chhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK--GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
+.+-|.+.+.||+|.|++|-.|++.-+|+.||||++.+..- .....+.+|++.|+-++|||||++|++ .++..
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEV-----iDTQT 90 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEV-----IDTQT 90 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeeh-----hcccc
Confidence 34668999999999999999999999999999999987643 334568899999999999999999999 66788
Q ss_pred eeeeeecccccCCchhhhhcccccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSNDKL 148 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~ 148 (628)
..|+|.|...+|++++||-++...+
T Consensus 91 KlyLiLELGD~GDl~DyImKHe~Gl 115 (864)
T KOG4717|consen 91 KLYLILELGDGGDLFDYIMKHEEGL 115 (864)
T ss_pred eEEEEEEecCCchHHHHHHhhhccc
Confidence 9999999999999999998776544
No 85
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.14 E-value=5.3e-11 Score=123.24 Aligned_cols=100 Identities=20% Similarity=0.398 Sum_probs=82.4
Q ss_pred HHHHHhCCCCcCceeecCCceeEEEEEECCC-----CcEEEEEEeeccc-cchhhhHHHHHHHHhhcC-CCCccccccee
Q 042887 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGET-----GTTVAVKVMNLKQ-KGAAKSFVTECEALSNVR-HRNLIKIITVC 114 (628)
Q Consensus 42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~-----~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~ 114 (628)
.+..+.++|.+.+.||+|+||.||+|.+... +..||+|++.... ....+.+.+|+.+++++. ||||+++++++
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 4556678999999999999999999987433 3469999996543 334467899999999996 99999999996
Q ss_pred eeccccccceeeeeecccccCCchhhhhcccc
Q 042887 115 SSIDFKGVDFKALIYEYMKCGSSEDWMHQSND 146 (628)
Q Consensus 115 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~ 146 (628)
. .....|+|||||++|+|.+++.+...
T Consensus 111 ~-----~~~~~~lv~Ey~~~g~L~~~l~~~~~ 137 (400)
T cd05105 111 T-----KSGPIYIITEYCFYGDLVNYLHKNRD 137 (400)
T ss_pred c-----cCCceEEEEEecCCCcHHHHHHHhhh
Confidence 4 36789999999999999999976543
No 86
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.14 E-value=5.3e-11 Score=126.03 Aligned_cols=98 Identities=22% Similarity=0.331 Sum_probs=81.9
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcC-CCCcccccceeeecc-ccc-cc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVR-HRNLIKIITVCSSID-FKG-VD 123 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~-~~~-~~ 123 (628)
..++++.+.|.+|||+.||.|.....|..||+|++-..++...+.+.+|+++|+.|+ |+|||.+++...... ... .-
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 456788899999999999999998877999999997777777888999999999997 999999999533211 112 35
Q ss_pred eeeeeecccccCCchhhhhcc
Q 042887 124 FKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~ 144 (628)
.+.+.||||.||.|-++|...
T Consensus 116 EvllLmEyC~gg~Lvd~mn~R 136 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTR 136 (738)
T ss_pred EEEeehhhccCCcHHHHHHHH
Confidence 678899999999999999744
No 87
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.14 E-value=8.7e-11 Score=121.81 Aligned_cols=91 Identities=16% Similarity=0.257 Sum_probs=79.2
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.|+..+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++.+. +....
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~-----~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ-----DKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE-----eCCEE
Confidence 5888999999999999999999999999999997542 334567889999999999999999999854 47789
Q ss_pred eeeecccccCCchhhhhcc
Q 042887 126 ALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~ 144 (628)
|+|||||++|+|.+++.+.
T Consensus 77 ~lv~E~~~gg~L~~~l~~~ 95 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRM 95 (382)
T ss_pred EEEEeCCCCCcHHHHHHhc
Confidence 9999999999999988654
No 88
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.13 E-value=3.6e-11 Score=119.95 Aligned_cols=96 Identities=25% Similarity=0.427 Sum_probs=83.9
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhc-CCCCcccccceeeecccc
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFK 120 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 120 (628)
....+|.+++.||+|+|++|++|+.+++++.||||++.+. .+.-.+-+.+|-.+|..| .||.||+++.. |+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T-----FQ 144 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT-----FQ 144 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE-----ee
Confidence 3457899999999999999999999999999999999764 233455677899999999 79999999988 67
Q ss_pred ccceeeeeecccccCCchhhhhccc
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
+....|+|+||+++|+|.++|++-+
T Consensus 145 D~~sLYFvLe~A~nGdll~~i~K~G 169 (604)
T KOG0592|consen 145 DEESLYFVLEYAPNGDLLDLIKKYG 169 (604)
T ss_pred cccceEEEEEecCCCcHHHHHHHhC
Confidence 7999999999999999999998765
No 89
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.13 E-value=5.5e-11 Score=130.09 Aligned_cols=94 Identities=27% Similarity=0.499 Sum_probs=80.5
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCc-----EEEEEEeecc-ccchhhhHHHHHHHHhhcCCCCcccccceeeecccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGT-----TVAVKVMNLK-QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFK 120 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~-----~~avK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 120 (628)
+...+..+.||+|+||.||+|.+..... .||+|.+++. +.+....|.+|+.+|++++|||||+++++|.+
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~---- 766 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD---- 766 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC----
Confidence 4566778899999999999999864332 3999998765 45677899999999999999999999999864
Q ss_pred ccceeeeeecccccCCchhhhhccc
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
....++++|||++|||..|+++.+
T Consensus 767 -~~~~~i~leyM~gGDL~sflr~~r 790 (1025)
T KOG1095|consen 767 -SGPPLILLEYMEGGDLLSFLRESR 790 (1025)
T ss_pred -CCCcEEEehhcccCcHHHHHHhcc
Confidence 677899999999999999998775
No 90
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.13 E-value=6.1e-11 Score=122.36 Aligned_cols=99 Identities=22% Similarity=0.383 Sum_probs=81.2
Q ss_pred HHHHHhCCCCcCceeecCCceeEEEEEE-----CCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhc-CCCCccccccee
Q 042887 42 DLSKATNNFSASNMIGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNV-RHRNLIKIITVC 114 (628)
Q Consensus 42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~-----~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~ 114 (628)
++..+.++|++.+.||+|+||.||+|.+ ..++..||+|+++... ....+.+.+|+.+++.+ +||||+++++++
T Consensus 29 ~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~ 108 (375)
T cd05104 29 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC 108 (375)
T ss_pred ccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence 3445567899999999999999999974 3456789999986532 33456789999999999 799999999986
Q ss_pred eeccccccceeeeeecccccCCchhhhhccc
Q 042887 115 SSIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 115 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
. .....++|||||++|+|.+++....
T Consensus 109 ~-----~~~~~~lv~E~~~~g~L~~~l~~~~ 134 (375)
T cd05104 109 T-----VGGPTLVITEYCCYGDLLNFLRRKR 134 (375)
T ss_pred c-----cCCcceeeehhccCCcHHHHHHhcc
Confidence 4 4678899999999999999997654
No 91
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.13 E-value=8.9e-12 Score=134.14 Aligned_cols=109 Identities=18% Similarity=0.288 Sum_probs=92.9
Q ss_pred HHHHHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhcCCCCcccccceeee
Q 042887 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRHRNLIKIITVCSS 116 (628)
Q Consensus 40 ~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 116 (628)
..+....+++|++.++||+|+||.|..++++.+++.||+|++++. .+....-|..|-++|..-..+.||+++.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA--- 143 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA--- 143 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH---
Confidence 344555678999999999999999999999999999999999874 34455667888889999999999999999
Q ss_pred ccccccceeeeeecccccCCchhhhhccccccccccCC
Q 042887 117 IDFKGVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNLG 154 (628)
Q Consensus 117 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~ 154 (628)
|++....||||||++|||+...|.+.. .+++.|..
T Consensus 144 --FQD~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~Ar 178 (1317)
T KOG0612|consen 144 --FQDERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWAR 178 (1317)
T ss_pred --hcCccceEEEEecccCchHHHHHhhcC-CChHHHHH
Confidence 777999999999999999999998776 66655443
No 92
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.13 E-value=4.6e-11 Score=121.73 Aligned_cols=98 Identities=20% Similarity=0.390 Sum_probs=79.3
Q ss_pred HHHhCCCCcCceeecCCceeEEEEEEC-----CCCcEEEEEEeeccc-cchhhhHHHHHHHHhhc-CCCCcccccceeee
Q 042887 44 SKATNNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNV-RHRNLIKIITVCSS 116 (628)
Q Consensus 44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 116 (628)
..+.++|++.+.||+|+||.||+|.+. .+++.||+|++.... ....+.+.+|+.++..+ +||||+++++++..
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 345678999999999999999999852 345689999986532 23456789999999999 89999999998642
Q ss_pred ccccccceeeeeecccccCCchhhhhccc
Q 042887 117 IDFKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 117 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.....+++|||+++|+|.+++....
T Consensus 83 ----~~~~~~lv~ey~~~g~L~~~l~~~~ 107 (338)
T cd05102 83 ----PNGPLMVIVEFCKYGNLSNFLRAKR 107 (338)
T ss_pred ----CCCceEEEEecCCCCcHHHHHHhcc
Confidence 3456899999999999999997654
No 93
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.12 E-value=1.6e-10 Score=117.31 Aligned_cols=93 Identities=18% Similarity=0.277 Sum_probs=81.2
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.++|++.+.||+|+||.||+|.+..+++.+|+|.+.... ....+.+.+|++++++++||||+++++++.+ .+..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DGEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-----CCEE
Confidence 468999999999999999999999899999999987642 3345678999999999999999999999654 6789
Q ss_pred eeeecccccCCchhhhhcc
Q 042887 126 ALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~ 144 (628)
++||||+++|+|.+++...
T Consensus 79 ~lv~e~~~~~~L~~~l~~~ 97 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKA 97 (333)
T ss_pred EEEEecCCCCcHHHHHHHc
Confidence 9999999999999998653
No 94
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.12 E-value=4.8e-11 Score=119.08 Aligned_cols=94 Identities=18% Similarity=0.332 Sum_probs=81.9
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
.++|...+++|+|+||+++.++++.+++.|++|.+.... ....+...+|+.++++++|||||.+.+.+ ...+.
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~-----~~~~~ 77 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSF-----EEDGQ 77 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccch-----hcCCc
Confidence 468999999999999999999999999999999997653 33445678999999999999999999995 44666
Q ss_pred -eeeeecccccCCchhhhhccc
Q 042887 125 -KALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 125 -~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.++||+||+||++.+.+.+..
T Consensus 78 ~l~Ivm~Y~eGg~l~~~i~~~k 99 (426)
T KOG0589|consen 78 LLCIVMEYCEGGDLAQLIKEQK 99 (426)
T ss_pred eEEEEEeecCCCCHHHHHHHHh
Confidence 999999999999999997666
No 95
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.12 E-value=9.7e-11 Score=114.20 Aligned_cols=97 Identities=20% Similarity=0.286 Sum_probs=84.6
Q ss_pred HHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc-chhhhHHHHHHHHhhcCCCCcccccceeeeccccc
Q 042887 43 LSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK-GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKG 121 (628)
Q Consensus 43 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 121 (628)
+....++|++.++||.|.-+.||+|++..+++.||||++....- .....+.+|+..|+.++||||++++..+. .
T Consensus 21 ~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFv-----v 95 (516)
T KOG0582|consen 21 FPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFV-----V 95 (516)
T ss_pred CCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEE-----e
Confidence 33456789999999999999999999999999999999987542 33678999999999999999999988854 4
Q ss_pred cceeeeeecccccCCchhhhhcc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
.+..|.||.||.+|++.+.++..
T Consensus 96 ~~~LWvVmpfMa~GS~ldIik~~ 118 (516)
T KOG0582|consen 96 DSELWVVMPFMAGGSLLDIIKTY 118 (516)
T ss_pred cceeEEeehhhcCCcHHHHHHHH
Confidence 88999999999999999988654
No 96
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.12 E-value=1.7e-10 Score=117.13 Aligned_cols=93 Identities=18% Similarity=0.257 Sum_probs=81.2
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.++|++.+.||+|+||.||+|++..+|..||+|.+.... ....+.+.+|++++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DGEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-----CCEE
Confidence 468999999999999999999999999999999997642 3345679999999999999999999998643 6789
Q ss_pred eeeecccccCCchhhhhcc
Q 042887 126 ALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~ 144 (628)
++||||+++|+|.+++...
T Consensus 79 ~lv~e~~~~~~L~~~l~~~ 97 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEA 97 (331)
T ss_pred EEEeecCCCCcHHHHHHHc
Confidence 9999999999999998653
No 97
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.12 E-value=1.7e-11 Score=123.25 Aligned_cols=116 Identities=24% Similarity=0.376 Sum_probs=96.1
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
+...|..-..||+|+-|.||.|....+++.||||.+........+-+..|+.+|+..+|+|||.+++.+. ..+..
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Syl-----v~deL 345 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYL-----VGDEL 345 (550)
T ss_pred hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhc-----cccee
Confidence 4567888889999999999999999999999999998876666677899999999999999999999854 46889
Q ss_pred eeeecccccCCchhhhhccccccccccCCccccCCcCcccEEE
Q 042887 126 ALIYEYMKCGSSEDWMHQSNDKLEAGNLGLIQRLNLLKLEMID 168 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~l~~L~~L~ 168 (628)
|.||||++||+|.+.+... .++++....+|+.-+..|+.|+
T Consensus 346 WVVMEym~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fLH 386 (550)
T KOG0578|consen 346 WVVMEYMEGGSLTDVVTKT--RMTEGQIAAICREILQGLKFLH 386 (550)
T ss_pred EEEEeecCCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888644 3566666666665555555444
No 98
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.10 E-value=1.2e-10 Score=114.19 Aligned_cols=94 Identities=19% Similarity=0.416 Sum_probs=78.3
Q ss_pred hCCCCcCceeecCCceeEEEEEEC---CCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLG---ETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~---~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
..+|++.+.||+|+||.||+|.+. ..+..||+|.++... ......+.+|+.++++++||||+++++.+. ..
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~ 78 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-----RG 78 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe-----cC
Confidence 356889999999999999999875 345689999987642 334467899999999999999999999854 46
Q ss_pred ceeeeeecccccCCchhhhhccc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
...++||||+++|++.+++....
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~ 101 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHE 101 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCC
Confidence 78999999999999999987643
No 99
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.10 E-value=1.3e-10 Score=119.41 Aligned_cols=93 Identities=16% Similarity=0.312 Sum_probs=80.2
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
..++|++.+.||+|+||.||+|++..+++.||+|++.+.. ....+.+.+|+.+++.++||||+++++++ ...
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-----~~~ 115 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF-----QDD 115 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcC
Confidence 4578999999999999999999999999999999997532 23345678899999999999999999884 457
Q ss_pred ceeeeeecccccCCchhhhhc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~ 143 (628)
...|+|||||++|+|.+++..
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~ 136 (370)
T cd05621 116 KYLYMVMEYMPGGDLVNLMSN 136 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHh
Confidence 889999999999999998864
No 100
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.10 E-value=1.9e-10 Score=116.70 Aligned_cols=93 Identities=20% Similarity=0.310 Sum_probs=79.5
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||++++..+++.||+|++.... ......+.+|+.++..++|++|+++++++ ++...
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~-----~~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF-----QDENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 47899999999999999999999999999999987532 23345578889999999999999999884 45788
Q ss_pred eeeeecccccCCchhhhhccc
Q 042887 125 KALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.|+||||+++|+|.+++.+..
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~ 96 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFE 96 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhc
Confidence 999999999999999997643
No 101
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.09 E-value=6.4e-11 Score=115.31 Aligned_cols=93 Identities=27% Similarity=0.363 Sum_probs=81.9
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
..|...+.||+|+||.||+|.+.++++.||+|++.... +...+.+.+|+.++..++++||.++++++.. ....+
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~-----g~~Lw 87 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLK-----GTKLW 87 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheee-----cccHH
Confidence 45677789999999999999999999999999998764 4556889999999999999999999999654 77899
Q ss_pred eeecccccCCchhhhhccc
Q 042887 127 LIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~~ 145 (628)
++||||.||++.+.++...
T Consensus 88 iiMey~~gGsv~~lL~~~~ 106 (467)
T KOG0201|consen 88 IIMEYCGGGSVLDLLKSGN 106 (467)
T ss_pred HHHHHhcCcchhhhhccCC
Confidence 9999999999999886554
No 102
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.09 E-value=1.4e-10 Score=114.89 Aligned_cols=96 Identities=22% Similarity=0.388 Sum_probs=83.8
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
+.++|++.+.||+|+||.||+|.+..+++.||+|..........+.+.+|++++++++||||+++++.+. .....
T Consensus 3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 77 (280)
T cd06611 3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF-----YENKL 77 (280)
T ss_pred chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEe-----cCCeE
Confidence 3567999999999999999999998889999999997665555678999999999999999999999854 47788
Q ss_pred eeeecccccCCchhhhhcccc
Q 042887 126 ALIYEYMKCGSSEDWMHQSND 146 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~~ 146 (628)
|+||||++++++.+++.+...
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~ 98 (280)
T cd06611 78 WILIEFCDGGALDSIMLELER 98 (280)
T ss_pred EEEeeccCCCcHHHHHHHhcC
Confidence 999999999999999876443
No 103
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.08 E-value=1.6e-10 Score=118.79 Aligned_cols=92 Identities=24% Similarity=0.400 Sum_probs=80.2
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhc-CCCCcccccceeeecccc
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFK 120 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 120 (628)
...++|.+.+++|+|+||+|+.|..+.+++.||||++++. .+.+++....|.+++.-. +||.+++++.. |+
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~-----fQ 439 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC-----FQ 439 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc-----cc
Confidence 3457899999999999999999999999999999999875 356778888999888777 59999999998 78
Q ss_pred ccceeeeeecccccCCchhhh
Q 042887 121 GVDFKALIYEYMKCGSSEDWM 141 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l 141 (628)
+..+.|+||||+.|||+..+.
T Consensus 440 T~~~l~fvmey~~Ggdm~~~~ 460 (694)
T KOG0694|consen 440 TKEHLFFVMEYVAGGDLMHHI 460 (694)
T ss_pred cCCeEEEEEEecCCCcEEEEE
Confidence 899999999999999954333
No 104
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.08 E-value=1.8e-10 Score=118.68 Aligned_cols=99 Identities=18% Similarity=0.308 Sum_probs=83.3
Q ss_pred HHHHHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeee
Q 042887 40 YADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSS 116 (628)
Q Consensus 40 ~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 116 (628)
..+.....++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-- 112 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-- 112 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE--
Confidence 3344455689999999999999999999999999999999986532 23345678899999999999999999885
Q ss_pred ccccccceeeeeecccccCCchhhhhc
Q 042887 117 IDFKGVDFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 117 ~~~~~~~~~~lv~e~~~~g~L~~~l~~ 143 (628)
......|+|||||++|+|.+++..
T Consensus 113 ---~~~~~~~lv~Ey~~gg~L~~~~~~ 136 (371)
T cd05622 113 ---QDDRYLYMVMEYMPGGDLVNLMSN 136 (371)
T ss_pred ---EcCCEEEEEEcCCCCCcHHHHHHh
Confidence 447889999999999999998864
No 105
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.08 E-value=2.5e-10 Score=117.33 Aligned_cols=92 Identities=21% Similarity=0.307 Sum_probs=79.6
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|+..+.||+|+||.||+|++..+++.||+|++.... ......+.+|+.++..++||+|+++++.+ ++...
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF-----QDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 46888999999999999999999999999999997532 33456788899999999999999999884 45788
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.|+|||||++|+|.+++.+.
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~ 95 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKK 95 (360)
T ss_pred EEEEEeCCCCccHHHHHHhc
Confidence 99999999999999998654
No 106
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.08 E-value=1.4e-10 Score=119.42 Aligned_cols=93 Identities=17% Similarity=0.322 Sum_probs=79.8
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++ ++.
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~-----~~~ 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF-----QDD 115 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----ecC
Confidence 3467999999999999999999999999999999997532 23345578899999999999999999884 457
Q ss_pred ceeeeeecccccCCchhhhhc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~ 143 (628)
...|+||||+++|+|.+++..
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~ 136 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSN 136 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHh
Confidence 889999999999999998864
No 107
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.08 E-value=4e-10 Score=110.70 Aligned_cols=93 Identities=23% Similarity=0.334 Sum_probs=80.7
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
.++|++.+.||+|+||.||+|++..+++.||+|+...........+.+|+.++++++||||+++++.+. .....+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-----~~~~~~ 82 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL-----SREKLW 82 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEE-----eCCEEE
Confidence 467999999999999999999998899999999997654444567889999999999999999999854 367889
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
+||||+++++|.+++.+.
T Consensus 83 iv~e~~~~~~L~~~~~~~ 100 (267)
T cd06646 83 ICMEYCGGGSLQDIYHVT 100 (267)
T ss_pred EEEeCCCCCcHHHHHHhc
Confidence 999999999999988643
No 108
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.07 E-value=1.4e-10 Score=120.14 Aligned_cols=99 Identities=21% Similarity=0.437 Sum_probs=81.6
Q ss_pred HHHHHhCCCCcCceeecCCceeEEEEEEC-----CCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcC-CCCccccccee
Q 042887 42 DLSKATNNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVR-HRNLIKIITVC 114 (628)
Q Consensus 42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~ 114 (628)
.+..+.++|.+.+.||+|+||.||+|.+. ..++.||+|+++... ....+.+.+|+.+|..+. |||||++++++
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 35566778999999999999999999964 344679999997543 233457889999999997 99999999986
Q ss_pred eeccccccceeeeeecccccCCchhhhhccc
Q 042887 115 SSIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 115 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.. .+..++|||||++|+|.+++....
T Consensus 111 ~~-----~~~~~iv~E~~~~g~L~~~l~~~~ 136 (401)
T cd05107 111 TK-----GGPIYIITEYCRYGDLVDYLHRNK 136 (401)
T ss_pred cc-----CCCcEEEEeccCCCcHHHHHHhcc
Confidence 53 567899999999999999997654
No 109
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.07 E-value=2.3e-10 Score=116.30 Aligned_cols=94 Identities=17% Similarity=0.297 Sum_probs=78.8
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCC-cEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETG-TTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKG 121 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~-~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 121 (628)
..++|++.+.||+|+||.||+|.+..++ ..||+|.+.... ....+.+.+|+.+++.++||||+++++++. +
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-----~ 102 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK-----D 102 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE-----e
Confidence 3457999999999999999999976554 689999986532 334567889999999999999999999854 4
Q ss_pred cceeeeeecccccCCchhhhhcc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
....|+||||+++|+|.+++...
T Consensus 103 ~~~~~lv~Ey~~~g~L~~~i~~~ 125 (340)
T PTZ00426 103 ESYLYLVLEFVIGGEFFTFLRRN 125 (340)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHc
Confidence 77899999999999999998654
No 110
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.07 E-value=3e-10 Score=115.33 Aligned_cols=96 Identities=23% Similarity=0.308 Sum_probs=81.2
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||+|++..+|+.||+|+++... ....+.+.+|+.+++.++||||+++++++ .....
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~-----~~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAF-----QDKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCe
Confidence 46899999999999999999999999999999997642 23445688899999999999999999884 34678
Q ss_pred eeeeecccccCCchhhhhcccccc
Q 042887 125 KALIYEYMKCGSSEDWMHQSNDKL 148 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~ 148 (628)
.|+||||+++|+|.+++.+....+
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~l 99 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYEDQF 99 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhcCCC
Confidence 999999999999999997653333
No 111
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.07 E-value=3.8e-12 Score=114.03 Aligned_cols=91 Identities=19% Similarity=0.370 Sum_probs=79.5
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
.+.|++.++||+|.|+.||++.+..+|+.+|+|++... +....+.+.+|+++.+.++|||||++.+. +...++
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~t-----i~~~~~ 84 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-----IQEESF 84 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhh-----hcccce
Confidence 35788889999999999999999999999999999653 34467889999999999999999999998 455899
Q ss_pred eeeeecccccCCchhhhh
Q 042887 125 KALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~ 142 (628)
.|+|+|+|.|+++..-|-
T Consensus 85 ~ylvFe~m~G~dl~~eIV 102 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIV 102 (355)
T ss_pred eEEEEecccchHHHHHHH
Confidence 999999999999965543
No 112
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.06 E-value=2.7e-10 Score=114.17 Aligned_cols=93 Identities=27% Similarity=0.463 Sum_probs=76.8
Q ss_pred hCCCCcCceeecCCceeEEEEEECC----------------CCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGE----------------TGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIK 109 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~----------------~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~ 109 (628)
.++|++.+.||+|+||.||+|.+.. ++..||+|.+.... ......|.+|+.++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 4678999999999999999998632 33479999987542 334567999999999999999999
Q ss_pred ccceeeeccccccceeeeeecccccCCchhhhhcc
Q 042887 110 IITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 110 l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
+++++.+ ....+++|||+++|+|.+++...
T Consensus 84 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~ 113 (304)
T cd05096 84 LLGVCVD-----EDPLCMITEYMENGDLNQFLSSH 113 (304)
T ss_pred EEEEEec-----CCceEEEEecCCCCcHHHHHHhc
Confidence 9998643 56789999999999999998654
No 113
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.06 E-value=3.2e-10 Score=116.23 Aligned_cols=92 Identities=22% Similarity=0.374 Sum_probs=80.3
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||+|++..+|+.||+|++.... ......+.+|++++..++||||+++++++ .....
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF-----QDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe-----ecCCe
Confidence 46899999999999999999999999999999997542 24456788999999999999999999884 45788
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.++||||+++|+|.+++...
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~ 95 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRK 95 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHc
Confidence 99999999999999998755
No 114
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.06 E-value=1.9e-11 Score=127.30 Aligned_cols=85 Identities=24% Similarity=0.269 Sum_probs=37.4
Q ss_pred cCCCCCCEEEeecccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCC
Q 042887 231 WNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLS 310 (628)
Q Consensus 231 ~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 310 (628)
..+..++.++++.|.+. .+-..+. .+.+|+.|++.+|+|..+. ..+..+++|++|++++|+|+.+.+ +..++.|+
T Consensus 69 ~~l~~l~~l~l~~n~i~-~~~~~l~-~~~~l~~l~l~~n~i~~i~-~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~ 143 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIA-KILNHLS-KLKSLEALDLYDNKIEKIE-NLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLK 143 (414)
T ss_pred HHhHhHHhhccchhhhh-hhhcccc-cccceeeeeccccchhhcc-cchhhhhcchheeccccccccccc--hhhccchh
Confidence 34455555555555554 2111121 2455555555555555221 113444445555555555443322 23333444
Q ss_pred EEEccCCcCC
Q 042887 311 RLFLSKNNLG 320 (628)
Q Consensus 311 ~L~L~~n~l~ 320 (628)
.|++++|.|+
T Consensus 144 ~L~l~~N~i~ 153 (414)
T KOG0531|consen 144 ELNLSGNLIS 153 (414)
T ss_pred hheeccCcch
Confidence 4444444443
No 115
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.05 E-value=4.6e-10 Score=111.54 Aligned_cols=93 Identities=22% Similarity=0.477 Sum_probs=78.4
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.++|++.+.||+|+||.||+|++..+++.||+|.++... ......+.+|+.++++++||||+++++++ ......
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~ 78 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII-----HTERCL 78 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEE-----cCCCeE
Confidence 467999999999999999999999999999999987543 23345678999999999999999999984 446789
Q ss_pred eeeecccccCCchhhhhccc
Q 042887 126 ALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~ 145 (628)
++||||+++ ++.+++....
T Consensus 79 ~lv~e~~~~-~l~~~l~~~~ 97 (288)
T cd07871 79 TLVFEYLDS-DLKQYLDNCG 97 (288)
T ss_pred EEEEeCCCc-CHHHHHHhcC
Confidence 999999985 8888886543
No 116
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.05 E-value=4.7e-10 Score=112.63 Aligned_cols=92 Identities=17% Similarity=0.236 Sum_probs=79.8
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
++|++.+.||+|+||.||+|.+..++..+|+|.+.... .....++.+|++++++++||||+++++++. ..+..+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY-----SDGEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCCEEE
Confidence 36899999999999999999999999999999987542 233456889999999999999999999854 478899
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
++|||+++++|.+++...
T Consensus 76 lv~ey~~~~~L~~~l~~~ 93 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKA 93 (308)
T ss_pred EEeeccCCCcHHHHHHhc
Confidence 999999999999998654
No 117
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.05 E-value=4.5e-10 Score=123.79 Aligned_cols=91 Identities=19% Similarity=0.305 Sum_probs=79.6
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||+|++..+|+.||+|++.... ....+++.+|++++++++||||+++++++.+ .+.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d-----~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD-----GDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-----CCE
Confidence 57999999999999999999999999999999986532 2334679999999999999999999998643 678
Q ss_pred eeeeecccccCCchhhhhc
Q 042887 125 KALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~ 143 (628)
.|++|||++||+|.+++..
T Consensus 77 lyLVMEY~eGGSL~~lL~s 95 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKS 95 (932)
T ss_pred EEEEEEcCCCCCHHHHHHH
Confidence 8999999999999998864
No 118
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.04 E-value=4.8e-10 Score=113.33 Aligned_cols=86 Identities=24% Similarity=0.323 Sum_probs=73.8
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeec
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYE 130 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 130 (628)
+.||+|+||.||+|++..+|+.||+|+++... ......+.+|+.++++++||||+++++++ ......|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EcCCEEEEEEe
Confidence 46999999999999999999999999997542 23445678999999999999999999884 45788999999
Q ss_pred ccccCCchhhhhcc
Q 042887 131 YMKCGSSEDWMHQS 144 (628)
Q Consensus 131 ~~~~g~L~~~l~~~ 144 (628)
|+++|++.+++...
T Consensus 76 ~~~~~~L~~~l~~~ 89 (323)
T cd05571 76 YANGGELFFHLSRE 89 (323)
T ss_pred CCCCCcHHHHHHHc
Confidence 99999999888654
No 119
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.04 E-value=4.9e-10 Score=113.25 Aligned_cols=86 Identities=26% Similarity=0.335 Sum_probs=73.4
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeec
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYE 130 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 130 (628)
+.||+|+||.||+|++..+|+.||+|++... .......+.+|+.+++.++||||+++++++ ......|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCEEEEEEe
Confidence 4699999999999999999999999999754 223445678899999999999999999884 44778999999
Q ss_pred ccccCCchhhhhcc
Q 042887 131 YMKCGSSEDWMHQS 144 (628)
Q Consensus 131 ~~~~g~L~~~l~~~ 144 (628)
|+++|++.+++...
T Consensus 76 ~~~~~~L~~~l~~~ 89 (323)
T cd05595 76 YANGGELFFHLSRE 89 (323)
T ss_pred CCCCCcHHHHHHHc
Confidence 99999998887654
No 120
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.04 E-value=4.6e-10 Score=111.36 Aligned_cols=90 Identities=21% Similarity=0.300 Sum_probs=76.3
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.|+..+.||+|+||.||+|.+..+|+.||+|.+.... ......+.+|+.++++++|++|+++.+++ .+.+..
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEE-----ccCCeE
Confidence 3777899999999999999999999999999986532 22334678999999999999999999885 346789
Q ss_pred eeeecccccCCchhhhhc
Q 042887 126 ALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~ 143 (628)
++||||+++|++.+++..
T Consensus 76 ~lv~e~~~~g~L~~~~~~ 93 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYN 93 (285)
T ss_pred EEEEEecCCCcHHHHHHh
Confidence 999999999999887754
No 121
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.04 E-value=5.2e-10 Score=110.99 Aligned_cols=91 Identities=21% Similarity=0.299 Sum_probs=76.8
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.|++.+.||+|+||.||++.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++.+ ......
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeee-----cCCCeE
Confidence 4788899999999999999998899999999986532 22335578899999999999999999884 446789
Q ss_pred eeeecccccCCchhhhhcc
Q 042887 126 ALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~ 144 (628)
++||||+++|++.+++...
T Consensus 76 ~lv~e~~~~~~L~~~~~~~ 94 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNM 94 (285)
T ss_pred EEEEeccCCCcHHHHHHhc
Confidence 9999999999999887543
No 122
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.04 E-value=1.9e-11 Score=127.20 Aligned_cols=247 Identities=24% Similarity=0.276 Sum_probs=155.3
Q ss_pred cCCCCCCEEEcccccceeecccccccCCCCCEEEccCCcCCCcCCCCccccccccCCCCCceeecccCCcccccchHHHh
Q 042887 280 SNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNNLGTESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIAN 359 (628)
Q Consensus 280 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~ 359 (628)
..+..++.+++..|.+.. ....+..+++|+.|++.+|.|..+... +..++
T Consensus 69 ~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~~-------l~~~~---------------------- 118 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIENL-------LSSLV---------------------- 118 (414)
T ss_pred HHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhcccc-------hhhhh----------------------
Confidence 344555556666666653 222345556666666666666542210 22233
Q ss_pred ccccccEEEccCCcceeeCchhhhccCCcCeeeeccccccccCCcCCCCCCCCCeEecccCccccccC-ccccCCCCCCe
Q 042887 360 LSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRGTIP-DTLGNLTLLNR 438 (628)
Q Consensus 360 ~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~ 438 (628)
+|++|++++|.|+.. ..+..++.|+.|++++|.|... ..+..++.|+.+++++|.+....+ . ...+.+++.
T Consensus 119 ---~L~~L~ls~N~I~~i--~~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~ 190 (414)
T KOG0531|consen 119 ---NLQVLDLSFNKITKL--EGLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEE 190 (414)
T ss_pred ---cchheeccccccccc--cchhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHH
Confidence 455555555555533 3456666788899999988743 456668888999999998885444 2 467788888
Q ss_pred EecCCcccccccCCcccCCcchhcccceEEcCCCcCccccchhhhccC--CCCEeeCcCCcCcccCCccccCCCCCCeEE
Q 042887 439 LFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSIPLEVGNLR--NLAEFDLSENHFSNEIPVTLSACTTLEYLH 516 (628)
Q Consensus 439 L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 516 (628)
++++.|.+... ..+..+..+ ..+++..|.++...+ +..+. .|+.+++++|++. ..+..+..+..+..|+
T Consensus 191 l~l~~n~i~~i--~~~~~~~~l----~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~ 261 (414)
T KOG0531|consen 191 LDLGGNSIREI--EGLDLLKKL----VLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLD 261 (414)
T ss_pred HhccCCchhcc--cchHHHHHH----HHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccc
Confidence 88888888632 223333333 445788888874322 22222 3788888888887 3335667778888888
Q ss_pred CcCceeeeecCccccCCCCCCEEECCCCccccc---Cchh-hhcccCCCeEeccCCcCcccCC
Q 042887 517 LQGNSFSGSLPLSLKTLKSIKELDLSRNNLSGQ---IPKY-LENLLFLAYLNLSYNHFEGEVP 575 (628)
Q Consensus 517 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~-~~~l~~L~~L~ls~N~l~~~~p 575 (628)
+.+|++... ..+...+.+..+....|.+... .... ....+.++.+++..|++....+
T Consensus 262 ~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 262 LSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred hhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 888888632 2345567777888888887622 1121 4556778888888888776544
No 123
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.04 E-value=2.3e-10 Score=109.07 Aligned_cols=99 Identities=22% Similarity=0.334 Sum_probs=83.4
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeec--cccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
....|...+.||+|+||.|+.|.+..+|+.||||.+.. ...-.+++..||+..++.++|+||+.+.++......+...
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 34566667899999999999999999999999999973 3455678899999999999999999999987654455678
Q ss_pred eeeeeecccccCCchhhhhccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
..|+|+|+|+ .||++.++...
T Consensus 100 DvYiV~elMe-tDL~~iik~~~ 120 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIKSQQ 120 (359)
T ss_pred eeEEehhHHh-hHHHHHHHcCc
Confidence 8999999995 58888887654
No 124
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.04 E-value=3e-10 Score=115.90 Aligned_cols=96 Identities=21% Similarity=0.403 Sum_probs=78.4
Q ss_pred HhCCCCcCceeecCCceeEEEEEEC-----CCCcEEEEEEeeccc-cchhhhHHHHHHHHhhc-CCCCcccccceeeecc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNV-RHRNLIKIITVCSSID 118 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 118 (628)
+.++|++.+.||+|+||.||+|.+. .+++.||||+++... ......+.+|+.++.++ +||||+++++++..
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-- 82 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK-- 82 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec--
Confidence 4568999999999999999999852 457889999997543 23345788999999999 58999999998643
Q ss_pred ccccceeeeeecccccCCchhhhhccc
Q 042887 119 FKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.....+++||||++|+|.+++....
T Consensus 83 --~~~~~~lv~ey~~~g~L~~~i~~~~ 107 (343)
T cd05103 83 --PGGPLMVIVEFCKFGNLSNYLRSKR 107 (343)
T ss_pred --CCCceEEEEeccCCCcHHHHHHhcC
Confidence 3457889999999999999997654
No 125
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.04 E-value=1.1e-10 Score=105.08 Aligned_cols=98 Identities=19% Similarity=0.251 Sum_probs=86.1
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
.++|.+.+.+|+|||+.||.++...+++.||+|++......+.+...+|++..++++||||+++++.+....-+..+..|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 46799999999999999999999999999999999877766778899999999999999999999987653344567899
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
++++|...|++.+.+...
T Consensus 100 ll~Pyy~~Gsl~d~i~~~ 117 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERL 117 (302)
T ss_pred EEeehhccccHHHHHHHH
Confidence 999999999999988543
No 126
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.03 E-value=6e-10 Score=111.62 Aligned_cols=93 Identities=25% Similarity=0.505 Sum_probs=77.9
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|+.+++.++||||+++++++ ......
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII-----HTKETL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEE-----ecCCeE
Confidence 468999999999999999999999899999999987543 22345678999999999999999999985 447789
Q ss_pred eeeecccccCCchhhhhccc
Q 042887 126 ALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~ 145 (628)
++||||+. +++.+++....
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~ 97 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDKHP 97 (303)
T ss_pred EEEEECCC-cCHHHHHHhCC
Confidence 99999996 57777776543
No 127
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.03 E-value=5.3e-10 Score=113.50 Aligned_cols=93 Identities=20% Similarity=0.300 Sum_probs=79.2
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||++++..+++.||+|++.+.. ......+.+|+.++..++|++|+++++++ .+...
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAF-----QDENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecCCE
Confidence 47899999999999999999999999999999986532 23344578899999999999999999885 44788
Q ss_pred eeeeecccccCCchhhhhccc
Q 042887 125 KALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.|+||||+++|+|.+++.+..
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~ 96 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFE 96 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhc
Confidence 999999999999999997643
No 128
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.03 E-value=4e-10 Score=115.46 Aligned_cols=89 Identities=28% Similarity=0.333 Sum_probs=76.1
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.++|+..+.||+|+||.||+|++..+|+.||+|++.... ....+.+.+|+++++.++|+||+++++++ ...+..
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 147 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHNGEI 147 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccCCeE
Confidence 456888899999999999999999899999999986543 23456789999999999999999999984 457889
Q ss_pred eeeecccccCCchhh
Q 042887 126 ALIYEYMKCGSSEDW 140 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~ 140 (628)
|+||||+++|++.+.
T Consensus 148 ~lv~e~~~~~~L~~~ 162 (353)
T PLN00034 148 QVLLEFMDGGSLEGT 162 (353)
T ss_pred EEEEecCCCCccccc
Confidence 999999999998653
No 129
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.02 E-value=6.1e-10 Score=110.48 Aligned_cols=95 Identities=29% Similarity=0.485 Sum_probs=79.6
Q ss_pred CCCCcCceeecCCceeEEEEEE----CCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKL----GETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~----~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
.+|++.+.||+|+||.||+|.+ ..+++.||+|.+........+.+.+|+++++.++||||+++++++.. .+..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc---CCCC
Confidence 4788899999999999999984 35688999999876655556788999999999999999999987643 2345
Q ss_pred eeeeeecccccCCchhhhhccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
..++|+||+++|+|.+++.+..
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~ 102 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHR 102 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcC
Confidence 6899999999999999986544
No 130
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.02 E-value=2.9e-11 Score=121.35 Aligned_cols=120 Identities=26% Similarity=0.311 Sum_probs=93.7
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc---chhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK---GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
-|+-.+.||.|+||-||.|++..+.+.||||.+.-..+ .....+..|+..|.+++|||+|.+.+++.. ....
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr-----e~Ta 101 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR-----EHTA 101 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec-----cchH
Confidence 45666789999999999999999999999999975433 233568999999999999999999999654 7889
Q ss_pred eeeecccccCCchhhhhccccccccccCCccccCCcCcccEEEccCCccc
Q 042887 126 ALIYEYMKCGSSEDWMHQSNDKLEAGNLGLIQRLNLLKLEMIDVGDNQLI 175 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~ 175 (628)
|+|||||-| +-.+.+.-..+.+.+.....++.+.+..|.+|+ |.|.|.
T Consensus 102 WLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLH-S~~~IH 149 (948)
T KOG0577|consen 102 WLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLH-SHNRIH 149 (948)
T ss_pred HHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH-HhhHHh
Confidence 999999975 666677666666665555556666666777666 555554
No 131
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.02 E-value=2.6e-10 Score=117.51 Aligned_cols=99 Identities=21% Similarity=0.395 Sum_probs=81.1
Q ss_pred HHHHHhCCCCcCceeecCCceeEEEEEECCCC-----cEEEEEEeeccc-cchhhhHHHHHHHHhhc-CCCCccccccee
Q 042887 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGETG-----TTVAVKVMNLKQ-KGAAKSFVTECEALSNV-RHRNLIKIITVC 114 (628)
Q Consensus 42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~-----~~~avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~ 114 (628)
.|....++|++.+.||+|+||.||+|++...| +.||+|+++... ....+.+.+|+.+++.+ +|+|||++++++
T Consensus 32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 34556678999999999999999999864433 579999997543 33456788999999999 799999999986
Q ss_pred eeccccccceeeeeecccccCCchhhhhccc
Q 042887 115 SSIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 115 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
. .....++|||||++|+|.+++....
T Consensus 112 ~-----~~~~~~lv~ey~~~g~L~~~l~~~~ 137 (374)
T cd05106 112 T-----HGGPVLVITEYCCYGDLLNFLRKKA 137 (374)
T ss_pred c-----CCCCeEEeHhhccCCcHHHHHHhhh
Confidence 4 4678899999999999999997544
No 132
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.02 E-value=6.7e-10 Score=111.72 Aligned_cols=84 Identities=18% Similarity=0.267 Sum_probs=72.6
Q ss_pred eecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeeccc
Q 042887 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYM 132 (628)
Q Consensus 56 iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 132 (628)
||+|+||.||+|++..+++.||+|++... .......+.+|+.++++++||||+++++.+. .....|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ-----SPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe-----cCCeEEEEEcCC
Confidence 69999999999999999999999999753 2334567889999999999999999998853 478899999999
Q ss_pred ccCCchhhhhcc
Q 042887 133 KCGSSEDWMHQS 144 (628)
Q Consensus 133 ~~g~L~~~l~~~ 144 (628)
++|+|.+++...
T Consensus 76 ~~g~L~~~l~~~ 87 (312)
T cd05585 76 NGGELFHHLQRE 87 (312)
T ss_pred CCCcHHHHHHhc
Confidence 999999988654
No 133
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.01 E-value=3.9e-10 Score=110.75 Aligned_cols=93 Identities=25% Similarity=0.357 Sum_probs=80.8
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
.++|++.+.||+|+||.||+|++..+++.||+|.++.........+.+|+.+++.++||||+++++.+. .....|
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~-----~~~~~~ 82 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL-----RRDKLW 82 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----eCCEEE
Confidence 457888899999999999999999899999999987655445567889999999999999999999854 367889
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
++|||+++++|.+++...
T Consensus 83 lv~e~~~~~~L~~~~~~~ 100 (267)
T cd06645 83 ICMEFCGGGSLQDIYHVT 100 (267)
T ss_pred EEEeccCCCcHHHHHHhc
Confidence 999999999999988643
No 134
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.01 E-value=3.9e-10 Score=107.74 Aligned_cols=98 Identities=22% Similarity=0.485 Sum_probs=81.4
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCC-cccccceeeecc-cccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRN-LIKIITVCSSID-FKGV 122 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~-~~~~ 122 (628)
+..|+..+.+|+|+||+||+|+.+.+|+.||+|.+.... ++......||+.++++++|+| ||.+++++.... +...
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 456777788999999999999999999999999998764 345667899999999999999 999999976521 2233
Q ss_pred ceeeeeecccccCCchhhhhccc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
...++|+||+.. ++..++....
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~ 111 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLP 111 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhcc
Confidence 589999999974 8999987655
No 135
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.01 E-value=6.4e-10 Score=110.42 Aligned_cols=104 Identities=22% Similarity=0.375 Sum_probs=85.8
Q ss_pred ccHHHHHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhc-CCCCcccccceeee
Q 042887 38 VSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV-RHRNLIKIITVCSS 116 (628)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 116 (628)
+.++....+.++|++.+.||+|+||.||+|.+..+++.+|+|....... ....+.+|+.+++++ +||||+++++.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 4455566678899999999999999999999999999999998764322 335678899999999 69999999998754
Q ss_pred ccccccceeeeeecccccCCchhhhh
Q 042887 117 IDFKGVDFKALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 117 ~~~~~~~~~~lv~e~~~~g~L~~~l~ 142 (628)
.........++||||+++|+|.+++.
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~ 112 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVK 112 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHH
Confidence 33445678999999999999998875
No 136
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.01 E-value=9e-10 Score=111.54 Aligned_cols=86 Identities=23% Similarity=0.336 Sum_probs=73.6
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeec
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYE 130 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 130 (628)
+.||+|+||.||+|++..+|+.||+|++... .......+.+|+.+++.++||||+++++.+ ......++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF-----QTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCEEEEEEe
Confidence 4699999999999999999999999999754 233456788999999999999999998884 45788999999
Q ss_pred ccccCCchhhhhcc
Q 042887 131 YMKCGSSEDWMHQS 144 (628)
Q Consensus 131 ~~~~g~L~~~l~~~ 144 (628)
|+++|++.+++...
T Consensus 76 y~~~g~L~~~l~~~ 89 (328)
T cd05593 76 YVNGGELFFHLSRE 89 (328)
T ss_pred CCCCCCHHHHHHhc
Confidence 99999998887543
No 137
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.01 E-value=6.5e-11 Score=119.62 Aligned_cols=102 Identities=28% Similarity=0.488 Sum_probs=82.1
Q ss_pred HhCCCCcCceeecCCceeEEEEEECC--CCc--EEEEEEeec-cccchhhhHHHHHHHHhhcCCCCcccccceeeecccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGE--TGT--TVAVKVMNL-KQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFK 120 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~--~~~--~~avK~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 120 (628)
.++.....+.||+|-||.||+|.+.. .|+ -||||.-+. +.....+.|.+|+.+|++++|||||+++++|.
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~----- 461 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV----- 461 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee-----
Confidence 34445566789999999999999742 233 388888765 34556788999999999999999999999987
Q ss_pred ccceeeeeecccccCCchhhhhccccccccccC
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQSNDKLEAGNL 153 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~ 153 (628)
....|+|||.++.|+|..|+......++.+.+
T Consensus 462 -e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL 493 (974)
T KOG4257|consen 462 -EQPMWIVMELAPLGELREYLQQNKDSLPLRTL 493 (974)
T ss_pred -ccceeEEEecccchhHHHHHHhccccchHHHH
Confidence 46789999999999999999887776654433
No 138
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.00 E-value=9.3e-12 Score=125.64 Aligned_cols=118 Identities=20% Similarity=0.303 Sum_probs=98.0
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
+.+.|.++..+|.|+||+||+|..++++-..|.|++...+....+.|.-||+||...+||+||+++++++ .....
T Consensus 30 P~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy-----~enkL 104 (1187)
T KOG0579|consen 30 PRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYY-----FENKL 104 (1187)
T ss_pred HHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHh-----ccCce
Confidence 4556778888999999999999999998889999998877778899999999999999999999999854 36788
Q ss_pred eeeecccccCCchhhhhccccccccccCCccccCCcCcccEEE
Q 042887 126 ALIYEYMKCGSSEDWMHQSNDKLEAGNLGLIQRLNLLKLEMID 168 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~l~~L~~L~ 168 (628)
||+.|||.||.+...|..-+..+++.....+|..-+..|.+|+
T Consensus 105 wiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LH 147 (1187)
T KOG0579|consen 105 WILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLH 147 (1187)
T ss_pred EEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHh
Confidence 9999999999999888777777776666555655555555443
No 139
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.00 E-value=8.4e-10 Score=109.64 Aligned_cols=89 Identities=21% Similarity=0.367 Sum_probs=75.5
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++ ...+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAF-----RRRGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhE-----ecCCEE
Confidence 36899999999999999999999999999999987542 23456788999999999999999999985 447789
Q ss_pred eeeecccccCCchhhh
Q 042887 126 ALIYEYMKCGSSEDWM 141 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l 141 (628)
|+||||++++.+..+.
T Consensus 76 ~lv~e~~~~~~l~~~~ 91 (287)
T cd07848 76 YLVFEYVEKNMLELLE 91 (287)
T ss_pred EEEEecCCCCHHHHHH
Confidence 9999999987765443
No 140
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.00 E-value=1.9e-10 Score=84.03 Aligned_cols=60 Identities=40% Similarity=0.546 Sum_probs=33.9
Q ss_pred CCCeEECcCceeeeecCccccCCCCCCEEECCCCcccccCchhhhcccCCCeEeccCCcC
Q 042887 511 TLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRNNLSGQIPKYLENLLFLAYLNLSYNHF 570 (628)
Q Consensus 511 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l 570 (628)
+|++|++++|+++...+..|.++++|++|++++|+++...++.|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455555555555544445555555555555555555555555555555555555555543
No 141
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.00 E-value=6.7e-10 Score=123.06 Aligned_cols=99 Identities=19% Similarity=0.335 Sum_probs=83.5
Q ss_pred HHHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeeccc
Q 042887 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDF 119 (628)
Q Consensus 42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 119 (628)
+.....++|++.+.||+|+||.||+|.+..+++.||+|.+... .......+.+|+.+++.++|||||++++++..
T Consensus 7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d--- 83 (1021)
T PTZ00266 7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN--- 83 (1021)
T ss_pred CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe---
Confidence 3344567899999999999999999999999999999998753 23345678999999999999999999998643
Q ss_pred cccceeeeeecccccCCchhhhhc
Q 042887 120 KGVDFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~ 143 (628)
.....+|+||||+++|+|.+++..
T Consensus 84 e~~~~lyIVMEY~~gGSL~~lL~k 107 (1021)
T PTZ00266 84 KANQKLYILMEFCDAGDLSRNIQK 107 (1021)
T ss_pred cCCCEEEEEEeCCCCCcHHHHHHH
Confidence 335678999999999999998865
No 142
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.99 E-value=1.5e-10 Score=108.08 Aligned_cols=96 Identities=24% Similarity=0.342 Sum_probs=83.5
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccc
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKG 121 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 121 (628)
..+++|...+++|+|.||+|..++.+.+|+.||+|++++. .+..+..-..|-++|+..+||.+..+... |++
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYs-----FQt 239 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYS-----FQT 239 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhh-----hcc
Confidence 3568899999999999999999999999999999999764 34445566788999999999999988777 788
Q ss_pred cceeeeeecccccCCchhhhhccc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.++.++||||+.||+|..++.+..
T Consensus 240 ~drlCFVMeyanGGeLf~HLsrer 263 (516)
T KOG0690|consen 240 QDRLCFVMEYANGGELFFHLSRER 263 (516)
T ss_pred CceEEEEEEEccCceEeeehhhhh
Confidence 999999999999999998886543
No 143
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.99 E-value=1.1e-09 Score=109.23 Aligned_cols=92 Identities=26% Similarity=0.352 Sum_probs=81.1
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
..+|++.+.||+|+||.||+|....+++.||+|.+........+.+.+|+.+++.++||||+++++.+. ..+..|
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 92 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELW 92 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCEEE
Confidence 468999999999999999999998899999999997655445567889999999999999999999854 467899
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
+||||++++++.+++.+
T Consensus 93 lv~e~~~~~~L~~~~~~ 109 (297)
T cd06656 93 VVMEYLAGGSLTDVVTE 109 (297)
T ss_pred EeecccCCCCHHHHHHh
Confidence 99999999999998854
No 144
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=98.99 E-value=1.2e-09 Score=111.47 Aligned_cols=95 Identities=21% Similarity=0.340 Sum_probs=77.3
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|++.+.||+|+||.||+|++..+|+.||+|.+... ......++.+|+.++++++||||+++++++...........|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 488889999999999999999999999999998643 223345688999999999999999999987543333345689
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
+|||||. +++.+++...
T Consensus 81 lv~e~~~-~~L~~~l~~~ 97 (338)
T cd07859 81 VVFELME-SDLHQVIKAN 97 (338)
T ss_pred EEEecCC-CCHHHHHHhc
Confidence 9999996 6888887643
No 145
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.99 E-value=7.3e-10 Score=110.02 Aligned_cols=92 Identities=21% Similarity=0.312 Sum_probs=79.3
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc-ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK-QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
++|++.+.||+|+||.||+|.+..+|+.||+|.+... .......+.+|+.++++++||||+++++.+. .....|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFF-----IEGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhee-----cCCeEE
Confidence 4688999999999999999999889999999988653 2333467899999999999999999999854 478899
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
+||||++++++.+++...
T Consensus 76 lv~e~~~~~~l~~~~~~~ 93 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGG 93 (286)
T ss_pred EEEeecCCCCHHHHHHhc
Confidence 999999999999888653
No 146
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=98.99 E-value=7e-10 Score=110.53 Aligned_cols=95 Identities=24% Similarity=0.377 Sum_probs=82.8
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
+.+.|++.+.||+|+||.||+|++..+++.||+|..........+.+.+|+.+++.++||||+++++.+. .....
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 84 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY-----WDGKL 84 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE-----eCCeE
Confidence 4467999999999999999999999999999999997765556678899999999999999999999854 36789
Q ss_pred eeeecccccCCchhhhhccc
Q 042887 126 ALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~ 145 (628)
++||||++++++..++.+..
T Consensus 85 ~lv~e~~~~~~l~~~~~~~~ 104 (292)
T cd06644 85 WIMIEFCPGGAVDAIMLELD 104 (292)
T ss_pred EEEEecCCCCcHHHHHHhhc
Confidence 99999999999988876543
No 147
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=98.99 E-value=3.3e-10 Score=110.82 Aligned_cols=93 Identities=28% Similarity=0.470 Sum_probs=80.8
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
+..+|++.+.||+|+||.||+|.+.. ++.+|+|.+..........+.+|+.+++.++||||+++++.+. .....
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~ 77 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS-----VGEPV 77 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEe-----cCCCe
Confidence 45679999999999999999999976 8899999987665545677899999999999999999999854 46788
Q ss_pred eeeecccccCCchhhhhcc
Q 042887 126 ALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~ 144 (628)
+++|||+++|+|.+++.+.
T Consensus 78 ~lv~e~~~~~~L~~~~~~~ 96 (261)
T cd05148 78 YIITELMEKGSLLAFLRSP 96 (261)
T ss_pred EEEEeecccCCHHHHHhcC
Confidence 9999999999999999754
No 148
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=98.98 E-value=7.4e-10 Score=116.73 Aligned_cols=116 Identities=23% Similarity=0.382 Sum_probs=93.5
Q ss_pred ccHHHHHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhc-CCCCcccccceeee
Q 042887 38 VSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV-RHRNLIKIITVCSS 116 (628)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 116 (628)
+.+.....+.+.|++.++||+|.||.||++..+++++.+|+|+....... .+....|..+++.. .|||++.+++++.-
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 44566667788999999999999999999999999999999998776443 35567788888877 49999999999876
Q ss_pred ccccccceeeeeecccccCCchhhhhcc-ccccccccCC
Q 042887 117 IDFKGVDFKALIYEYMKCGSSEDWMHQS-NDKLEAGNLG 154 (628)
Q Consensus 117 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~ 154 (628)
.+--..+..|+|||||.+|+..+.++.- +..+.+.+..
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~Ia 126 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIA 126 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHH
Confidence 5555678999999999999999998644 3445544444
No 149
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=98.98 E-value=9.5e-10 Score=111.28 Aligned_cols=89 Identities=22% Similarity=0.400 Sum_probs=73.0
Q ss_pred CCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHH---hhcCCCCcccccceeeeccccccc
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEAL---SNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l---~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
|++.+.||+|+||.||+|.+..+|+.||+|+++... ....+.+.+|++++ +.++||||+++++++ ....
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~-----~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF-----QTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE-----EcCC
Confidence 677889999999999999999999999999997542 23345677776654 566799999999984 4478
Q ss_pred eeeeeecccccCCchhhhhc
Q 042887 124 FKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~ 143 (628)
..|+||||+++|++..++..
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~ 95 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHT 95 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhc
Confidence 89999999999999887753
No 150
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.98 E-value=3.3e-10 Score=82.73 Aligned_cols=59 Identities=39% Similarity=0.616 Sum_probs=34.6
Q ss_pred cccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeeccccc
Q 042887 163 KLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENN 221 (628)
Q Consensus 163 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 221 (628)
+|++|++++|+++...++.|.++++|++|++++|.++.+.+++|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45556666666655555555566666666666666655555555666666666665554
No 151
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=98.98 E-value=1.3e-09 Score=110.51 Aligned_cols=86 Identities=20% Similarity=0.231 Sum_probs=72.7
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhc-CCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|++..+++.||+|+++... ......+.+|+.++..+ +||||+++++++ ......|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEE-----EcCCEEEEEE
Confidence 46999999999999999999999999997642 23345678899999988 699999999984 4478899999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
|||++|+|.+++...
T Consensus 76 e~~~~g~L~~~~~~~ 90 (329)
T cd05588 76 EFVSGGDLMFHMQRQ 90 (329)
T ss_pred eCCCCCCHHHHHHHc
Confidence 999999998887644
No 152
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=98.98 E-value=1.4e-09 Score=106.83 Aligned_cols=91 Identities=20% Similarity=0.363 Sum_probs=78.3
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc------cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ------KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~------~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
+|+..+.||+|+||.||+|....+++.||+|.+.... ....+.+.+|+.++++++|+||+++++.+. ..
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC-----ED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec-----cC
Confidence 4788899999999999999999999999999987532 123567899999999999999999999854 46
Q ss_pred ceeeeeecccccCCchhhhhcc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
...++|+||+++++|.+++.+.
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~ 97 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKY 97 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHh
Confidence 7889999999999999988643
No 153
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=98.98 E-value=1.3e-09 Score=110.30 Aligned_cols=86 Identities=26% Similarity=0.313 Sum_probs=73.1
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeec
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYE 130 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 130 (628)
+.||+|+||.||+|.+..+|+.||+|++.... ......+.+|+++++.++||||+++++++ ......|+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~-----~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EcCCEEEEEEe
Confidence 46999999999999999999999999997542 23445678899999999999999998884 44788999999
Q ss_pred ccccCCchhhhhcc
Q 042887 131 YMKCGSSEDWMHQS 144 (628)
Q Consensus 131 ~~~~g~L~~~l~~~ 144 (628)
|+++|++.+++...
T Consensus 76 ~~~~~~L~~~l~~~ 89 (325)
T cd05594 76 YANGGELFFHLSRE 89 (325)
T ss_pred CCCCCcHHHHHHhc
Confidence 99999998887643
No 154
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.98 E-value=1.9e-10 Score=117.83 Aligned_cols=90 Identities=24% Similarity=0.437 Sum_probs=75.9
Q ss_pred CCCCcCceeecCCceeEEEEEECCC-Cc--EEEEEEeeccccc-hhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGET-GT--TVAVKVMNLKQKG-AAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~-~~--~~avK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
++..+.+.||+|+||+|++|.|..- |+ .||||++...... ....|.+|+.+|.+|+|||+|++|++.. +.
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl------~q 183 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVL------DQ 183 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeec------cc
Confidence 4455668899999999999999643 33 4899999776543 6788999999999999999999999943 36
Q ss_pred eeeeeecccccCCchhhhhc
Q 042887 124 FKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~ 143 (628)
...||||.+++|+|.+.+++
T Consensus 184 p~mMV~ELaplGSLldrLrk 203 (1039)
T KOG0199|consen 184 PAMMVFELAPLGSLLDRLRK 203 (1039)
T ss_pred hhhHHhhhcccchHHHHHhh
Confidence 78899999999999999987
No 155
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.97 E-value=1.7e-09 Score=107.86 Aligned_cols=92 Identities=25% Similarity=0.357 Sum_probs=81.1
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
..+|++.+.||+|+||.||+|++..+++.||+|.+........+.+.+|+.+++.+.||||+++++.+. .....+
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~-----~~~~~~ 93 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELW 93 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEE-----eCCEEE
Confidence 467999999999999999999998899999999997765555677899999999999999999999854 367899
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
+||||++++++.+++.+
T Consensus 94 lv~e~~~~~~L~~~~~~ 110 (296)
T cd06654 94 VVMEYLAGGSLTDVVTE 110 (296)
T ss_pred EeecccCCCCHHHHHHh
Confidence 99999999999998854
No 156
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.97 E-value=9e-10 Score=109.27 Aligned_cols=93 Identities=22% Similarity=0.322 Sum_probs=80.0
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.++|++.+.||+|+||.||+|.+..+|+.||+|++.... ....+.+.+|+++++.++||||+++++.+. .....
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~ 78 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFL-----NENNI 78 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEe-----cCCEE
Confidence 356888899999999999999998899999999886543 334567899999999999999999999864 36789
Q ss_pred eeeecccccCCchhhhhcc
Q 042887 126 ALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~ 144 (628)
++||||+++|++.+++...
T Consensus 79 ~lv~e~~~~~~L~~~~~~~ 97 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKKG 97 (284)
T ss_pred EEEEecCCCCCHHHHHHhc
Confidence 9999999999999888653
No 157
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=98.97 E-value=1.3e-09 Score=107.06 Aligned_cols=93 Identities=19% Similarity=0.316 Sum_probs=79.8
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
++.......||+|+||.||+|.+..+++.||+|.+........+.+.+|+.+++.++|+||+++++++. .....+
T Consensus 7 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 81 (268)
T cd06624 7 YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS-----ENGFFK 81 (268)
T ss_pred cccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeec-----cCCEEE
Confidence 444555578999999999999998899999999987665556678999999999999999999999854 367899
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
+++||+++++|.+++...
T Consensus 82 lv~e~~~~~~L~~~l~~~ 99 (268)
T cd06624 82 IFMEQVPGGSLSALLRSK 99 (268)
T ss_pred EEEecCCCCCHHHHHHHh
Confidence 999999999999998754
No 158
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=98.97 E-value=1.4e-09 Score=108.19 Aligned_cols=92 Identities=22% Similarity=0.325 Sum_probs=79.6
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|++++++++||||+++++.+. ....
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ-----DDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEE-----cCCe
Confidence 46889999999999999999999999999999986532 234567889999999999999999999854 4778
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.++||||++++++.+++...
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~ 95 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKS 95 (290)
T ss_pred EEEEEecCCCCCHHHHHHHc
Confidence 99999999999999998654
No 159
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.97 E-value=1.2e-09 Score=109.71 Aligned_cols=88 Identities=17% Similarity=0.198 Sum_probs=69.4
Q ss_pred HHHHhCCCCcCceeecCCceeEEEEEECC-CCcEEEEEEeecc-----ccchhhhHHHHHHHHhhcCCCCcccccceeee
Q 042887 43 LSKATNNFSASNMIGQGSFGFVYKGKLGE-TGTTVAVKVMNLK-----QKGAAKSFVTECEALSNVRHRNLIKIITVCSS 116 (628)
Q Consensus 43 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~-~~~~~avK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 116 (628)
.....++|.+.+.||+|+||+||+|++.. +++.||||..... .....+.|.+|+++|++++|+|++..+..
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~--- 89 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA--- 89 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---
Confidence 34456789999999999999999999876 6778899987532 12234568999999999999999853322
Q ss_pred ccccccceeeeeecccccCCch
Q 042887 117 IDFKGVDFKALIYEYMKCGSSE 138 (628)
Q Consensus 117 ~~~~~~~~~~lv~e~~~~g~L~ 138 (628)
....|+||||++|++|.
T Consensus 90 -----~~~~~LVmE~~~G~~L~ 106 (365)
T PRK09188 90 -----TGKDGLVRGWTEGVPLH 106 (365)
T ss_pred -----cCCcEEEEEccCCCCHH
Confidence 23469999999999986
No 160
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=98.96 E-value=1.4e-09 Score=106.50 Aligned_cols=94 Identities=27% Similarity=0.379 Sum_probs=82.8
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
.++|++.+.+|+|+||.||+|.+..+++.+|+|.+........+.+.+|++++++++||||+++++.+. .....+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 76 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYL-----RRDKLW 76 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEE-----eCCEEE
Confidence 468999999999999999999998889999999998765555678899999999999999999998854 467899
Q ss_pred eeecccccCCchhhhhccc
Q 042887 127 LIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~~ 145 (628)
++|||++++++.+++....
T Consensus 77 l~~e~~~~~~l~~~~~~~~ 95 (262)
T cd06613 77 IVMEYCGGGSLQDIYQVTR 95 (262)
T ss_pred EEEeCCCCCcHHHHHHhhc
Confidence 9999999999999887653
No 161
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.96 E-value=6.1e-11 Score=120.87 Aligned_cols=93 Identities=26% Similarity=0.388 Sum_probs=83.6
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
.++++|+...++|.|+||.||+|++..+++..|+|+++.....+.....+|+-+++..+|||||.+++.+. ..+.
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsyl-----r~dk 86 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYL-----RRDK 86 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhh-----hhcC
Confidence 45688999999999999999999999999999999999887777788889999999999999999999854 4788
Q ss_pred eeeeecccccCCchhhhh
Q 042887 125 KALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~ 142 (628)
.++.||||.+|++.+...
T Consensus 87 lwicMEycgggslQdiy~ 104 (829)
T KOG0576|consen 87 LWICMEYCGGGSLQDIYH 104 (829)
T ss_pred cEEEEEecCCCcccceee
Confidence 999999999999987543
No 162
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=98.96 E-value=1.3e-09 Score=105.88 Aligned_cols=87 Identities=26% Similarity=0.467 Sum_probs=73.9
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeeccc
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYM 132 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 132 (628)
+.||+|+||.||+|.+..+++.||+|.+.... ......+.+|++++++++||||+++++++. .....++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-----QKQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-----CCCCeEEEEeec
Confidence 46999999999999998899999999876432 334567899999999999999999999864 367789999999
Q ss_pred ccCCchhhhhccc
Q 042887 133 KCGSSEDWMHQSN 145 (628)
Q Consensus 133 ~~g~L~~~l~~~~ 145 (628)
+++++.+++....
T Consensus 76 ~~~~L~~~~~~~~ 88 (252)
T cd05084 76 QGGDFLTFLRTEG 88 (252)
T ss_pred cCCcHHHHHHhCC
Confidence 9999999986543
No 163
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=98.96 E-value=1.3e-09 Score=106.53 Aligned_cols=91 Identities=24% Similarity=0.376 Sum_probs=79.5
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
+|++.+.||.|+||.||+|.+..+++.||+|.+.... ....+.+.+|++++++++||||+++++. +.+....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-----~~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYS-----FQDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHh-----hcCCCeE
Confidence 4888899999999999999998899999999997542 2345778999999999999999999988 4457889
Q ss_pred eeeecccccCCchhhhhcc
Q 042887 126 ALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~ 144 (628)
++|+||+++++|.+++...
T Consensus 76 ~lv~e~~~~~~L~~~l~~~ 94 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQK 94 (258)
T ss_pred EEEEeCCCCCCHHHHHHhc
Confidence 9999999999999998654
No 164
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=98.96 E-value=2.1e-09 Score=105.47 Aligned_cols=94 Identities=23% Similarity=0.350 Sum_probs=77.9
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-----cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-----KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
.+|++.+.||+|+||.||.|.+..+|+.||+|.+.... ....+.+.+|+.++++++||||+++++.+.+ ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRD---PME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEecc---CCC
Confidence 57899999999999999999999999999999886421 2234678899999999999999999987542 123
Q ss_pred ceeeeeecccccCCchhhhhcc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
...+++|||+++++|.+++...
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~ 100 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSY 100 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHc
Confidence 5788999999999999988643
No 165
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=98.96 E-value=2.3e-09 Score=105.97 Aligned_cols=88 Identities=24% Similarity=0.277 Sum_probs=75.5
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
++|++.+.||+|+||.||+|++..+++.||+|.+.... ....+.+.+|+.++++++||||+++++.+.. ....+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-----ENRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-----CCEEE
Confidence 46888899999999999999999999999999986542 3344678899999999999999999998653 67889
Q ss_pred eeecccccCCchhh
Q 042887 127 LIYEYMKCGSSEDW 140 (628)
Q Consensus 127 lv~e~~~~g~L~~~ 140 (628)
+||||+++|++..+
T Consensus 76 lv~e~~~~~~l~~~ 89 (279)
T cd06619 76 ICTEFMDGGSLDVY 89 (279)
T ss_pred EEEecCCCCChHHh
Confidence 99999999988654
No 166
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.95 E-value=1.6e-09 Score=109.55 Aligned_cols=91 Identities=21% Similarity=0.279 Sum_probs=75.5
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhcCCC-Ccccccceeeeccccccce
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRHR-NLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~h~-nIv~l~~~~~~~~~~~~~~ 124 (628)
+|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|++++..+.|+ +|+++++++ .....
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE-----EcCCE
Confidence 588899999999999999999999999999999754 233456788899999999765 577787774 34678
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.|+||||+++|+|.+++...
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~ 95 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQV 95 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHc
Confidence 99999999999999888644
No 167
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.95 E-value=1.1e-09 Score=116.61 Aligned_cols=91 Identities=19% Similarity=0.236 Sum_probs=78.2
Q ss_pred CCCCcCceeecCCceeEEEEEECCC-CcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGET-GTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~-~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
..|.+.+.||+|+||.||+|....+ ++.||+|.+..........+.+|+.+++.++|||||++++.+. ..+..|
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~-----~~~~~~ 141 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFK-----SDDKLL 141 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-----ECCEEE
Confidence 3489999999999999999999877 7889999876555445566788999999999999999999854 478899
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
+||||+++|+|.+++.+
T Consensus 142 lv~E~~~gg~L~~~l~~ 158 (478)
T PTZ00267 142 LIMEYGSGGDLNKQIKQ 158 (478)
T ss_pred EEEECCCCCCHHHHHHH
Confidence 99999999999988764
No 168
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=98.95 E-value=2.6e-10 Score=118.97 Aligned_cols=93 Identities=27% Similarity=0.477 Sum_probs=77.3
Q ss_pred CcCceeecCCceeEEEEEECCCCc----EEEEEEeecc-ccchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 51 SASNMIGQGSFGFVYKGKLGETGT----TVAVKVMNLK-QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 51 ~~~~~iG~G~~g~V~~~~~~~~~~----~~avK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.-.++||+|+||+||+|.+.-.|+ +||+|++... ......++..|+-+|.+++|||+++++++|.. +..
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~------s~~ 772 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCML------STL 772 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhccc------chH
Confidence 345789999999999999865554 4888887554 34456789999999999999999999999873 448
Q ss_pred eeeecccccCCchhhhhccccccc
Q 042887 126 ALIYEYMKCGSSEDWMHQSNDKLE 149 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~~~ 149 (628)
.+|++|+++|.|.+|++.+++.+.
T Consensus 773 qlvtq~mP~G~LlDyvr~hr~~ig 796 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHRDNIG 796 (1177)
T ss_pred HHHHHhcccchHHHHHHHhhcccc
Confidence 899999999999999998876664
No 169
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=98.94 E-value=1.1e-09 Score=106.85 Aligned_cols=88 Identities=30% Similarity=0.554 Sum_probs=71.5
Q ss_pred cCceeecCCceeEEEEEEC----CCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 52 ASNMIGQGSFGFVYKGKLG----ETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 52 ~~~~iG~G~~g~V~~~~~~----~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+.+.||.|+||.||+|.+. ..+..|+||.++... ....+.|.+|++.+++++||||+++++++.. ....+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-----~~~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-----NEPLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES-----SSSEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccc-----ccccc
Confidence 4578999999999999997 335679999996543 3346789999999999999999999999763 55689
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
+|+|||++|+|.+++...
T Consensus 78 lv~e~~~~g~L~~~L~~~ 95 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSK 95 (259)
T ss_dssp EEEE--TTEBHHHHHHHT
T ss_pred cccccccccccccccccc
Confidence 999999999999999876
No 170
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=98.94 E-value=1.5e-09 Score=105.84 Aligned_cols=91 Identities=23% Similarity=0.450 Sum_probs=75.7
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
++|++.+.||+|+||.||+|.+. ++..+|+|.+.... ...+.+.+|+.++++++||||+++++++. .....++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCT-----QQKPLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEc-----cCCCEEE
Confidence 45888899999999999999885 45689999876432 23467889999999999999999999854 4677899
Q ss_pred eecccccCCchhhhhccc
Q 042887 128 IYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~~ 145 (628)
+|||+++|++.+++....
T Consensus 77 v~e~~~~~~L~~~~~~~~ 94 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQ 94 (256)
T ss_pred EEEcCCCCcHHHHHHhCc
Confidence 999999999999886543
No 171
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=98.94 E-value=2.2e-09 Score=105.30 Aligned_cols=91 Identities=24% Similarity=0.369 Sum_probs=79.1
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||+|.+..+|+.||+|.++.. .....+.+.+|++++++++|++|+++++.+. ..+.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~-----~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI-----ENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee-----cCCe
Confidence 5799999999999999999999889999999988643 2334567899999999999999999999854 4678
Q ss_pred eeeeecccccCCchhhhhc
Q 042887 125 KALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~ 143 (628)
.+++|||+++|+|.+++..
T Consensus 77 ~~lv~e~~~~~~L~~~l~~ 95 (267)
T cd08224 77 LNIVLELADAGDLSRMIKH 95 (267)
T ss_pred EEEEEecCCCCCHHHHHHH
Confidence 8999999999999988864
No 172
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=98.94 E-value=1.7e-09 Score=106.17 Aligned_cols=94 Identities=26% Similarity=0.452 Sum_probs=78.0
Q ss_pred CCCCcCceeecCCceeEEEEEECCC---CcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGET---GTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~---~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
++|++.+.||+|+||.||+|.+..+ ...||+|.++... ......|.+|+.++++++||||+++++.+. ...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 78 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVT-----KSR 78 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEe-----cCC
Confidence 5688999999999999999998644 4579999986543 334567899999999999999999999854 467
Q ss_pred eeeeeecccccCCchhhhhcccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSND 146 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~ 146 (628)
..+++|||+++++|.+++.....
T Consensus 79 ~~~iv~e~~~~~~L~~~~~~~~~ 101 (266)
T cd05033 79 PVMIITEYMENGSLDKFLRENDG 101 (266)
T ss_pred ceEEEEEcCCCCCHHHHHHhccC
Confidence 78999999999999999876443
No 173
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=98.94 E-value=1.3e-09 Score=107.09 Aligned_cols=93 Identities=25% Similarity=0.464 Sum_probs=78.2
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCc---EEEEEEeecc-ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGT---TVAVKVMNLK-QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~---~~avK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
.+|++.+.||+|+||.||+|.+..+++ .||+|.+... .....+.|.+|+.+++.++||||+++++.+ ....
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~ 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKSR 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEE-----CCCC
Confidence 458888999999999999999876665 5999998754 334457899999999999999999999884 3467
Q ss_pred eeeeeecccccCCchhhhhccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
..++||||+++|++.+++....
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~ 100 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQND 100 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCC
Confidence 7899999999999999987544
No 174
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=98.94 E-value=2e-09 Score=105.62 Aligned_cols=91 Identities=23% Similarity=0.332 Sum_probs=78.2
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||+|++..+++.||+|.+.... ......+.+|+++++.++||||+++++.+. ..+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI-----EDNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE-----ECCe
Confidence 57899999999999999999999899999999886432 234457889999999999999999999854 3678
Q ss_pred eeeeecccccCCchhhhhc
Q 042887 125 KALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~ 143 (628)
.++++||+++|++.+++..
T Consensus 77 ~~~v~e~~~~~~L~~~~~~ 95 (267)
T cd08228 77 LNIVLELADAGDLSQMIKY 95 (267)
T ss_pred EEEEEEecCCCcHHHHHHH
Confidence 8999999999999988753
No 175
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=98.94 E-value=2.4e-09 Score=106.63 Aligned_cols=92 Identities=27% Similarity=0.382 Sum_probs=80.6
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
.++|++.+.||+|+||.||+|....+++.||+|.+........+.+.+|+.++++++||||+++++.+.. ....|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~~ 92 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV-----GDELW 92 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeee-----CCcEE
Confidence 4689999999999999999999988899999999876554455778999999999999999999998543 67889
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
+|+||++++++.+++.+
T Consensus 93 lv~e~~~~~~L~~~~~~ 109 (293)
T cd06647 93 VVMEYLAGGSLTDVVTE 109 (293)
T ss_pred EEEecCCCCcHHHHHhh
Confidence 99999999999999864
No 176
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.93 E-value=3.2e-10 Score=125.99 Aligned_cols=131 Identities=19% Similarity=0.238 Sum_probs=77.8
Q ss_pred CcCcccEEEccCCccccccchhhhCCCCCCEEecccCc--CcccccccccCCCCCCEeecccccCcccCCcCccCCCCCC
Q 042887 160 NLLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANM--LGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLE 237 (628)
Q Consensus 160 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~--l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~ 237 (628)
+....+...+-+|.+. .++... ..++|+.|-+..|. +..+..+.|..++.|++|||++|.=-+.+|..++++.+|+
T Consensus 521 ~~~~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lr 598 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLR 598 (889)
T ss_pred chhheeEEEEeccchh-hccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhh
Confidence 3445555666566554 222222 23356666666664 4433344466677777777776654446677777777777
Q ss_pred EEEeecccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEccccc
Q 042887 238 IISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNH 294 (628)
Q Consensus 238 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 294 (628)
+|++++..+. .+|..+.. +.+|.+|++..+.-....|.....+++|++|.+....
T Consensus 599 yL~L~~t~I~-~LP~~l~~-Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 599 YLDLSDTGIS-HLPSGLGN-LKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cccccCCCcc-ccchHHHH-HHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 7777777766 66666654 6666666666665544445555566666666665543
No 177
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=98.93 E-value=2.4e-09 Score=106.18 Aligned_cols=90 Identities=21% Similarity=0.310 Sum_probs=76.0
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.|+..+.||+|+||.||+|.+..+++.||+|.+.... ......+.+|+.++++++|++|+.+++.+. .....
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYE-----TKDAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEe-----cCCEE
Confidence 3677789999999999999999999999999986542 222345788999999999999999988854 46789
Q ss_pred eeeecccccCCchhhhhc
Q 042887 126 ALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~ 143 (628)
++||||+++|+|.+++..
T Consensus 76 ~lv~e~~~g~~L~~~l~~ 93 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYH 93 (285)
T ss_pred EEEEEecCCCcHHHHHHH
Confidence 999999999999988854
No 178
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=98.93 E-value=2.6e-09 Score=104.09 Aligned_cols=90 Identities=18% Similarity=0.276 Sum_probs=78.0
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc-ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK-QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
+|++.+.||+|+||.||++.+..+++.||+|.++.. .....+.+.+|+.+++.++||||+++++.+. +....|+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFE-----ADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEE-----ECCEEEE
Confidence 478889999999999999999999999999998653 2334567889999999999999999999854 4788999
Q ss_pred eecccccCCchhhhhc
Q 042887 128 IYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~ 143 (628)
+|||+++|++.+++..
T Consensus 76 v~e~~~~~~l~~~~~~ 91 (255)
T cd08219 76 VMEYCDGGDLMQKIKL 91 (255)
T ss_pred EEeeCCCCcHHHHHHh
Confidence 9999999999988864
No 179
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=98.93 E-value=1.7e-09 Score=106.27 Aligned_cols=93 Identities=25% Similarity=0.468 Sum_probs=76.8
Q ss_pred CCCCcCceeecCCceeEEEEEECCCC---cEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETG---TTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~---~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
++|++.+.||+|+||.||+|++..++ ..+|+|.++... ....+.+.+|+.++++++||||+++++.+. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 78 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-----KSK 78 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cCC
Confidence 46888999999999999999986444 369999886542 234567899999999999999999999854 467
Q ss_pred eeeeeecccccCCchhhhhccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
..+++|||+++|+|.+++....
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~ 100 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRKHD 100 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHhcC
Confidence 8899999999999999987544
No 180
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.93 E-value=2.4e-09 Score=107.66 Aligned_cols=93 Identities=22% Similarity=0.455 Sum_probs=77.9
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.++|.+.+.||+|+||.||+|++..+++.||+|.++... ......+.+|+.++++++||||+++++++. ..+..
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 79 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH-----TDKSL 79 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe-----eCCeE
Confidence 467999999999999999999999899999999987543 233456789999999999999999999854 46789
Q ss_pred eeeecccccCCchhhhhccc
Q 042887 126 ALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~ 145 (628)
++||||+++ ++.+++....
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~ 98 (309)
T cd07872 80 TLVFEYLDK-DLKQYMDDCG 98 (309)
T ss_pred EEEEeCCCC-CHHHHHHhcC
Confidence 999999985 7877776543
No 181
>PHA02988 hypothetical protein; Provisional
Probab=98.93 E-value=2.3e-09 Score=106.20 Aligned_cols=88 Identities=20% Similarity=0.308 Sum_probs=72.7
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccccc---hhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeec
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG---AAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYE 130 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 130 (628)
..||+|++|.||+|.+ +|+.||+|.++..... ..+.|.+|+.+|++++||||+++++++.+. .+.....++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~-~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI-VDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec-ccCCCceEEEEE
Confidence 5799999999999999 7899999999764322 246788999999999999999999986531 123457899999
Q ss_pred ccccCCchhhhhcc
Q 042887 131 YMKCGSSEDWMHQS 144 (628)
Q Consensus 131 ~~~~g~L~~~l~~~ 144 (628)
|+++|+|.+++...
T Consensus 103 y~~~g~L~~~l~~~ 116 (283)
T PHA02988 103 YCTRGYLREVLDKE 116 (283)
T ss_pred eCCCCcHHHHHhhC
Confidence 99999999998754
No 182
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=98.93 E-value=2.1e-09 Score=106.33 Aligned_cols=83 Identities=22% Similarity=0.292 Sum_probs=70.5
Q ss_pred eecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeeccc
Q 042887 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYM 132 (628)
Q Consensus 56 iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 132 (628)
||+|+||.||+|.+..+|+.||+|.+.... ....+.+..|+++++.++||||+++.+++ ......++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAF-----QTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEE-----cCCCeEEEEEeCC
Confidence 699999999999999999999999986542 22345678899999999999999998884 4577899999999
Q ss_pred ccCCchhhhhc
Q 042887 133 KCGSSEDWMHQ 143 (628)
Q Consensus 133 ~~g~L~~~l~~ 143 (628)
++|+|.+++..
T Consensus 76 ~~g~L~~~~~~ 86 (280)
T cd05608 76 NGGDLRYHIYN 86 (280)
T ss_pred CCCCHHHHHHh
Confidence 99999887753
No 183
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=98.93 E-value=2.5e-09 Score=107.98 Aligned_cols=86 Identities=22% Similarity=0.305 Sum_probs=71.3
Q ss_pred ceeecCCceeEEEEEEC---CCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeee
Q 042887 54 NMIGQGSFGFVYKGKLG---ETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALI 128 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~---~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv 128 (628)
+.||+|+||.||+++.. .+|+.||+|++.... ......+.+|++++++++||||+++++++ ......|+|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAF-----QTEGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEE-----EcCCEEEEE
Confidence 57999999999998863 578999999997643 22345677899999999999999999885 447889999
Q ss_pred ecccccCCchhhhhcc
Q 042887 129 YEYMKCGSSEDWMHQS 144 (628)
Q Consensus 129 ~e~~~~g~L~~~l~~~ 144 (628)
|||+++|+|.+++.+.
T Consensus 77 ~e~~~~~~L~~~l~~~ 92 (318)
T cd05582 77 LDFLRGGDLFTRLSKE 92 (318)
T ss_pred EcCCCCCcHHHHHHHc
Confidence 9999999999888543
No 184
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=98.93 E-value=2.5e-09 Score=107.63 Aligned_cols=86 Identities=22% Similarity=0.313 Sum_probs=71.4
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhc-CCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|++..+++.||+|+++... ....+.+..|..++... +||||+++++++. +.+..|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~-----~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ-----TKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE-----eCCEEEEEE
Confidence 46999999999999999999999999997642 23345667788888765 8999999998854 477899999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
||+++|+|.+++...
T Consensus 76 ey~~~g~L~~~l~~~ 90 (316)
T cd05619 76 EYLNGGDLMFHIQSC 90 (316)
T ss_pred eCCCCCcHHHHHHHc
Confidence 999999999988653
No 185
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.93 E-value=1e-09 Score=122.11 Aligned_cols=207 Identities=17% Similarity=0.207 Sum_probs=133.2
Q ss_pred CCCCCCEEecccCcCcccccccccCCCCCCEeeccccc--CcccCCcCccCCCCCCEEEeecccCcccCChhhhhCCCCC
Q 042887 184 NFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENN--FSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNV 261 (628)
Q Consensus 184 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~--i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L 261 (628)
+....+...+-+|.+. .++.+.. .++|++|-+..|. +....++.|..++.|++|||++|.=-+.+|..++. +-+|
T Consensus 521 ~~~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~-Li~L 597 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGE-LVHL 597 (889)
T ss_pred chhheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhh-hhhh
Confidence 4467788888888876 3444333 3379999999986 55455556788999999999988765689999985 9999
Q ss_pred cEEecccCcccccccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCCcCCCcCCCCccccccccCCCCCce
Q 042887 262 NFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNNLGTESTSDLDFLTLLTNCSQMEM 341 (628)
Q Consensus 262 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~~~L~~ 341 (628)
++|++++..++ .+|..++++..|.+|++..+.-....+.....+++|++|.+..-.... +......+.++.+|+.
T Consensus 598 ryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~----~~~~l~el~~Le~L~~ 672 (889)
T KOG4658|consen 598 RYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSN----DKLLLKELENLEHLEN 672 (889)
T ss_pred hcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeecccccc----chhhHHhhhcccchhh
Confidence 99999999999 789999999999999999887655667777779999999987765211 1123334455555555
Q ss_pred eecccCCccc-ccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeecccccc
Q 042887 342 LYLNTNKFGG-VFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVEYNQLT 399 (628)
Q Consensus 342 L~l~~n~~~~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 399 (628)
+......... ........+....+.+.+.++... ..+..+..+.+|+.|.+.++.+.
T Consensus 673 ls~~~~s~~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~ 730 (889)
T KOG4658|consen 673 LSITISSVLLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGIS 730 (889)
T ss_pred heeecchhHhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCc
Confidence 5543322100 001111111111222222222221 23345566666666666666654
No 186
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=98.93 E-value=2.5e-09 Score=106.13 Aligned_cols=90 Identities=20% Similarity=0.292 Sum_probs=76.0
Q ss_pred CCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
|+..+.||+|+||.||+|.+..+++.||+|.+.... ......+.+|+++++.++|++|+.+.+.+ ...+..+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAY-----ETKDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEE-----ecCCEEE
Confidence 667788999999999999999999999999986542 22345578899999999999999998884 3477899
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
++|||+++|++.+++...
T Consensus 77 lv~e~~~~~~L~~~~~~~ 94 (285)
T cd05632 77 LVLTIMNGGDLKFHIYNM 94 (285)
T ss_pred EEEEeccCccHHHHHHHh
Confidence 999999999999888643
No 187
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=98.93 E-value=2.4e-09 Score=108.02 Aligned_cols=86 Identities=28% Similarity=0.371 Sum_probs=72.3
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhc-CCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|++..+++.||+|++... .....+.+.+|..++..+ +||||+++++++ ......|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~-----~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF-----QTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE-----EcCCEEEEEE
Confidence 4699999999999999999999999999753 233456678888888877 699999999984 4578899999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
||+++|+|.+++.+.
T Consensus 76 Ey~~~g~L~~~i~~~ 90 (320)
T cd05590 76 EFVNGGDLMFHIQKS 90 (320)
T ss_pred cCCCCchHHHHHHHc
Confidence 999999999888654
No 188
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=98.92 E-value=2.5e-09 Score=108.03 Aligned_cols=91 Identities=21% Similarity=0.267 Sum_probs=74.6
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcC-CCCcccccceeeeccccccce
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~~ 124 (628)
+|+..+.||+|+||.||+|++..+|+.||+|++.... ....+.+..|..++..+. |++|+++++++ .+...
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF-----QTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE-----ecCCE
Confidence 3677899999999999999999999999999997542 234456788999988886 57777888774 44778
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.|+||||+++|+|.+++...
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~ 95 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQV 95 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHc
Confidence 99999999999999888653
No 189
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=98.92 E-value=2.7e-09 Score=103.97 Aligned_cols=91 Identities=21% Similarity=0.262 Sum_probs=79.3
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|+..+.||+|+||.||.++...+++.+++|.+.... ......+.+|++++++++|+||+++++.+. .....+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM-----DDNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe-----cCCeEE
Confidence 4888999999999999999999999999999986542 344567889999999999999999999954 467899
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
++|||+++|++.+++.+.
T Consensus 76 ~~~e~~~~~~L~~~~~~~ 93 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQ 93 (256)
T ss_pred EEEEecCCCcHHHHHHhc
Confidence 999999999999998754
No 190
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.92 E-value=3e-09 Score=105.71 Aligned_cols=93 Identities=19% Similarity=0.262 Sum_probs=78.5
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
++|+..+.||.|+||.||+|.+..+++.+|+|.+.... .....++.+|+++++.++||||+++++.+.+ ......+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLD---ESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEc---cCCCeEE
Confidence 36788899999999999999998899999999987543 2345678999999999999999999998653 2345789
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
+||||+++++|.+++..
T Consensus 78 lv~e~~~~~~L~~~l~~ 94 (287)
T cd06621 78 IAMEYCEGGSLDSIYKK 94 (287)
T ss_pred EEEEecCCCCHHHHHHH
Confidence 99999999999888753
No 191
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=98.92 E-value=3.4e-09 Score=103.41 Aligned_cols=91 Identities=26% Similarity=0.405 Sum_probs=77.8
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-----cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-----KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
+|+..+.||+|+||.||+|....+++.||+|.+.... ....+.+.+|+.+++.++|+||+++++.+. ...
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER-----EED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe-----cCC
Confidence 4777899999999999999998889999999986543 224567899999999999999999999854 467
Q ss_pred eeeeeecccccCCchhhhhcc
Q 042887 124 FKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~ 144 (628)
..++++||++++++.+++.+.
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~ 96 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKY 96 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhc
Confidence 889999999999999998653
No 192
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=98.92 E-value=2.7e-09 Score=107.92 Aligned_cols=87 Identities=22% Similarity=0.337 Sum_probs=71.8
Q ss_pred ceeecCCceeEEEEEEC---CCCcEEEEEEeeccc----cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 54 NMIGQGSFGFVYKGKLG---ETGTTVAVKVMNLKQ----KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~---~~~~~~avK~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+.||+|+||.||+++.. .+++.||+|+++... ......+.+|+.+|+.++||||+++++++. ..+..|
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-----~~~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQ-----TGGKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEe-----cCCeEE
Confidence 67999999999999864 468899999997532 223456788999999999999999998854 477899
Q ss_pred eeecccccCCchhhhhccc
Q 042887 127 LIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~~ 145 (628)
+||||+++|+|.+++....
T Consensus 77 lv~e~~~~~~L~~~~~~~~ 95 (323)
T cd05584 77 LILEYLSGGELFMHLEREG 95 (323)
T ss_pred EEEeCCCCchHHHHHHHcC
Confidence 9999999999999886543
No 193
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=98.92 E-value=3e-09 Score=107.76 Aligned_cols=86 Identities=21% Similarity=0.243 Sum_probs=71.8
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhc-CCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|++..+++.||+|++.... ......+.+|+.++.++ +||||+++++++. .....|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~-----~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-----TESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEE-----eCCEEEEEE
Confidence 46999999999999999999999999997642 23345677888888777 7999999999854 478899999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
||+++|++..++...
T Consensus 76 E~~~~~~L~~~~~~~ 90 (329)
T cd05618 76 EYVNGGDLMFHMQRQ 90 (329)
T ss_pred eCCCCCCHHHHHHHc
Confidence 999999998887543
No 194
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=98.92 E-value=1.4e-09 Score=108.07 Aligned_cols=96 Identities=23% Similarity=0.405 Sum_probs=77.5
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECC-----CCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecc
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGE-----TGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSID 118 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 118 (628)
...++|++.+.||+|+||.||+|.... .+..||+|.+.... ......+.+|+.+++.++||||+++++.+.
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--- 79 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS--- 79 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc---
Confidence 346789999999999999999997642 34579999886443 223346889999999999999999999854
Q ss_pred ccccceeeeeecccccCCchhhhhccc
Q 042887 119 FKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.....++||||+++|+|.+++....
T Consensus 80 --~~~~~~lv~e~~~~g~L~~~l~~~~ 104 (288)
T cd05061 80 --KGQPTLVVMELMAHGDLKSYLRSLR 104 (288)
T ss_pred --CCCCcEEEEeCCCCCCHHHHHHHhc
Confidence 3567899999999999999997543
No 195
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=98.92 E-value=2.9e-09 Score=107.23 Aligned_cols=86 Identities=21% Similarity=0.312 Sum_probs=70.2
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhc-CCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|++..+++.||+|+++... ....+.+..|..++... +||||+++++++ ......|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 46999999999999999999999999997542 23345566777777655 799999999884 4477899999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
||+++|+|.+++...
T Consensus 76 e~~~gg~L~~~~~~~ 90 (316)
T cd05592 76 EYLNGGDLMFHIQSS 90 (316)
T ss_pred cCCCCCcHHHHHHHc
Confidence 999999999888654
No 196
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=98.92 E-value=1.7e-09 Score=107.07 Aligned_cols=94 Identities=29% Similarity=0.524 Sum_probs=79.1
Q ss_pred hCCCCcCceeecCCceeEEEEEECC-----CCcEEEEEEeeccccc-hhhhHHHHHHHHhhcCCCCcccccceeeecccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGE-----TGTTVAVKVMNLKQKG-AAKSFVTECEALSNVRHRNLIKIITVCSSIDFK 120 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~~avK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 120 (628)
.++|.+.+.||+|+||.||+|.+.. +++.||+|.+...... ..+.+.+|+++++.++||||+++++.+.
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----- 78 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCT----- 78 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEe-----
Confidence 3568888999999999999998743 3578999998765433 4578999999999999999999999854
Q ss_pred ccceeeeeecccccCCchhhhhccc
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.....+++|||+++|+|.+++...+
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~ 103 (280)
T cd05049 79 EGDPPIMVFEYMEHGDLNKFLRSHG 103 (280)
T ss_pred cCCCeEEEEecCCCCCHHHHHHhcC
Confidence 3678999999999999999997654
No 197
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=98.92 E-value=3.2e-09 Score=103.44 Aligned_cols=91 Identities=21% Similarity=0.345 Sum_probs=79.1
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|++.+.||+|+||.||+|.+..+++.||+|.+... .......+.+|++++++++||||+++++.+. ..+..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL-----DKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec-----cCCEEE
Confidence 478889999999999999999999999999998653 2345567899999999999999999999854 467899
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
++|||++++++.+++...
T Consensus 76 lv~e~~~~~~L~~~l~~~ 93 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQ 93 (256)
T ss_pred EEEEeCCCCcHHHHHHHh
Confidence 999999999999998754
No 198
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=98.91 E-value=9.1e-10 Score=105.26 Aligned_cols=91 Identities=27% Similarity=0.414 Sum_probs=71.6
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
-.|...+++|.|+||.||+|...++++.||||.+-...+ ---+|+.+|+.++|||||++..++.+..-.+.-...+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 346777899999999999999999999999998854332 2248999999999999999988876521112335667
Q ss_pred eecccccCCchhhhhc
Q 042887 128 IYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~ 143 (628)
||||++. +|.+.++.
T Consensus 100 VleymP~-tL~~~~r~ 114 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRH 114 (364)
T ss_pred HHHhchH-HHHHHHHH
Confidence 9999995 88888864
No 199
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=98.91 E-value=2.9e-09 Score=107.56 Aligned_cols=86 Identities=24% Similarity=0.310 Sum_probs=72.0
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhc-CCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|++..+++.||+|++.... ....+.+..|.+++..+ +||||+++++++ ......|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCF-----QTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCeEEEEE
Confidence 46999999999999999999999999997542 33445677898888876 799999999985 4477899999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
||+++|++..++...
T Consensus 76 E~~~~~~L~~~l~~~ 90 (321)
T cd05591 76 EYVNGGDLMFQIQRS 90 (321)
T ss_pred eCCCCCcHHHHHHHc
Confidence 999999999888654
No 200
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=98.91 E-value=3.9e-09 Score=103.34 Aligned_cols=92 Identities=26% Similarity=0.433 Sum_probs=78.8
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-----cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-----KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
++|++.+.||+|+||.||.|....+++.||+|.+.... ......+.+|+.++++++||||+++++.+ +..
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCL-----RDD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ccC
Confidence 46899999999999999999998899999999986532 12345688999999999999999999985 446
Q ss_pred ceeeeeecccccCCchhhhhcc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
...++++||++++++.+++...
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~ 98 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAY 98 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHh
Confidence 7999999999999999988653
No 201
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=98.91 E-value=3.2e-09 Score=106.29 Aligned_cols=93 Identities=22% Similarity=0.470 Sum_probs=78.1
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.++|++.+.||+|+||.||+|.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++++. .....
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~-----~~~~~ 79 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-----TEKSL 79 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEe-----cCCeE
Confidence 467999999999999999999998899999999987543 233456789999999999999999999854 46789
Q ss_pred eeeecccccCCchhhhhccc
Q 042887 126 ALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~ 145 (628)
++||||++ +++.+++.+..
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~ 98 (301)
T cd07873 80 TLVFEYLD-KDLKQYLDDCG 98 (301)
T ss_pred EEEEeccc-cCHHHHHHhcC
Confidence 99999998 58888876543
No 202
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=98.91 E-value=2.9e-09 Score=106.02 Aligned_cols=105 Identities=22% Similarity=0.324 Sum_probs=85.0
Q ss_pred ccHHHHHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhc-CCCCcccccceeee
Q 042887 38 VSYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV-RHRNLIKIITVCSS 116 (628)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 116 (628)
+.+.+...+.++|++.+.||+|+||.||+|....+++.+|+|.+..... ....+.+|+.+++++ +|||++++++.+..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 3445555668899999999999999999999999999999999865432 345678899999999 79999999998764
Q ss_pred ccccccceeeeeecccccCCchhhhhc
Q 042887 117 IDFKGVDFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 117 ~~~~~~~~~~lv~e~~~~g~L~~~l~~ 143 (628)
.+.......++||||+++|++.+++..
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~ 117 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKG 117 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHH
Confidence 322234578999999999999988753
No 203
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.91 E-value=2.5e-09 Score=104.46 Aligned_cols=88 Identities=28% Similarity=0.550 Sum_probs=75.9
Q ss_pred CCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccc--hhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--AAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
|++.+.||+|+||.||+|....+++.||+|.+...... ......+|+.++++++||||+++++++.. ....++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 67789999999999999999999999999999876432 22334669999999999999999999543 788899
Q ss_pred eecccccCCchhhhh
Q 042887 128 IYEYMKCGSSEDWMH 142 (628)
Q Consensus 128 v~e~~~~g~L~~~l~ 142 (628)
+|||++++++.+++.
T Consensus 76 v~~~~~~~~L~~~l~ 90 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQ 90 (260)
T ss_dssp EEEEETTEBHHHHHH
T ss_pred ccccccccccccccc
Confidence 999999999999987
No 204
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=98.91 E-value=3.5e-09 Score=104.63 Aligned_cols=91 Identities=27% Similarity=0.371 Sum_probs=77.6
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+-|+..+.||+|+||.||+|.+..+++.||+|...... ....+.+.+|+..+++++||||+++++.+. .....+
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 78 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKLW 78 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEE-----eCCeEE
Confidence 45778889999999999999998889999999886543 234467889999999999999999999854 477899
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
+||||++++++.+++..
T Consensus 79 lv~e~~~~~~l~~~i~~ 95 (277)
T cd06641 79 IIMEYLGGGSALDLLEP 95 (277)
T ss_pred EEEEeCCCCcHHHHHhc
Confidence 99999999999988853
No 205
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=98.91 E-value=1.5e-09 Score=106.96 Aligned_cols=87 Identities=22% Similarity=0.385 Sum_probs=70.2
Q ss_pred eeecCCceeEEEEEECCC------------------------CcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccc
Q 042887 55 MIGQGSFGFVYKGKLGET------------------------GTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKI 110 (628)
Q Consensus 55 ~iG~G~~g~V~~~~~~~~------------------------~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l 110 (628)
.||+|+||.||+|....+ ...||+|.+..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 599999999999985321 13488888866544455678899999999999999999
Q ss_pred cceeeeccccccceeeeeecccccCCchhhhhcccc
Q 042887 111 ITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSND 146 (628)
Q Consensus 111 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~ 146 (628)
++++.+ ....++||||+++|++..++.....
T Consensus 82 ~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~~~~ 112 (274)
T cd05076 82 HGVCVR-----GSENIMVEEFVEHGPLDVCLRKEKG 112 (274)
T ss_pred EEEEEe-----CCceEEEEecCCCCcHHHHHHhcCC
Confidence 999754 6688999999999999988865443
No 206
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=98.90 E-value=1.7e-09 Score=107.89 Aligned_cols=93 Identities=27% Similarity=0.467 Sum_probs=76.5
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCC--------------cEEEEEEeecc-ccchhhhHHHHHHHHhhcCCCCccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETG--------------TTVAVKVMNLK-QKGAAKSFVTECEALSNVRHRNLIKII 111 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~--------------~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~ 111 (628)
.++|++.+.||+|+||.||+|++..++ ..||+|.++.. .......|.+|++++++++|||+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 357999999999999999999875432 35899998654 233456789999999999999999999
Q ss_pred ceeeeccccccceeeeeecccccCCchhhhhcc
Q 042887 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 112 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
+.+. .....++||||++++++.+++...
T Consensus 84 ~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~ 111 (295)
T cd05097 84 GVCV-----SDDPLCMITEYMENGDLNQFLSQR 111 (295)
T ss_pred EEEc-----CCCccEEEEecCCCCcHHHHHHhc
Confidence 9854 467889999999999999998653
No 207
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=98.90 E-value=2.9e-09 Score=105.45 Aligned_cols=91 Identities=24% Similarity=0.402 Sum_probs=78.8
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALI 128 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv 128 (628)
-|++.+.||+|+||.||+|.+..++..+|+|.+........+.+.+|+++++.++||||+++++.+. .....++|
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~~v 80 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY-----YENNLWIL 80 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEe-----eCCEEEEE
Confidence 3677889999999999999999899999999987655555677899999999999999999999864 36788999
Q ss_pred ecccccCCchhhhhcc
Q 042887 129 YEYMKCGSSEDWMHQS 144 (628)
Q Consensus 129 ~e~~~~g~L~~~l~~~ 144 (628)
+||+++|++.+++...
T Consensus 81 ~e~~~~~~l~~~~~~~ 96 (282)
T cd06643 81 IEFCAGGAVDAVMLEL 96 (282)
T ss_pred EEecCCCcHHHHHHhc
Confidence 9999999998887653
No 208
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=98.90 E-value=3.6e-09 Score=106.15 Aligned_cols=92 Identities=17% Similarity=0.342 Sum_probs=79.0
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||++.+..+++.||+|.+.... ......+.+|+.+++.++||||+++++.+ .....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSF-----ETKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ecCCE
Confidence 36888999999999999999999999999999987543 23345788999999999999999999884 34778
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.++||||++++++.+++...
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~ 95 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNI 95 (305)
T ss_pred EEEEEecCCCCcHHHHHHHc
Confidence 89999999999999998654
No 209
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=98.90 E-value=3.7e-09 Score=106.66 Aligned_cols=86 Identities=26% Similarity=0.335 Sum_probs=72.4
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhc-CCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|++..+++.||+|+++... ......+.+|+.++..+ +||||+++++++ ......|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~-----~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCF-----QTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 46999999999999999999999999997542 23445678899999888 699999999985 4477899999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
||+++|+|.+++.+.
T Consensus 76 e~~~~~~L~~~~~~~ 90 (318)
T cd05570 76 EYVNGGDLMFHIQRS 90 (318)
T ss_pred cCCCCCCHHHHHHHc
Confidence 999999999888654
No 210
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=98.90 E-value=2.9e-09 Score=107.39 Aligned_cols=92 Identities=25% Similarity=0.462 Sum_probs=76.3
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcE----EEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTT----VAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~----~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
.+|+..+.||+|+||.||+|++..+++. ||+|.++... ....+.+.+|+.+++.++||||+++++++. .
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~------~ 80 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL------T 80 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEc------C
Confidence 4699999999999999999998666554 8999986543 334567889999999999999999999864 2
Q ss_pred ceeeeeecccccCCchhhhhccc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
...++++||+++|++.+++....
T Consensus 81 ~~~~~v~e~~~~g~l~~~l~~~~ 103 (316)
T cd05108 81 STVQLITQLMPFGCLLDYVREHK 103 (316)
T ss_pred CCceeeeecCCCCCHHHHHHhcc
Confidence 35679999999999999987654
No 211
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=98.90 E-value=3.4e-09 Score=104.62 Aligned_cols=84 Identities=23% Similarity=0.312 Sum_probs=70.2
Q ss_pred eecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeeccc
Q 042887 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYM 132 (628)
Q Consensus 56 iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 132 (628)
||+|+||.||+++...+|+.||+|.+.... ......+..|++++++++||||+++++.+ +.....++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF-----ESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE-----ecCCeEEEEEecC
Confidence 699999999999999999999999986432 22234566799999999999999998884 4577899999999
Q ss_pred ccCCchhhhhcc
Q 042887 133 KCGSSEDWMHQS 144 (628)
Q Consensus 133 ~~g~L~~~l~~~ 144 (628)
++|++.+++...
T Consensus 76 ~g~~L~~~~~~~ 87 (277)
T cd05607 76 NGGDLKYHIYNV 87 (277)
T ss_pred CCCCHHHHHHhc
Confidence 999998887543
No 212
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=98.90 E-value=1.8e-09 Score=106.72 Aligned_cols=95 Identities=25% Similarity=0.418 Sum_probs=77.8
Q ss_pred HhCCCCcCceeecCCceeEEEEEECC-----CCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGE-----TGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDF 119 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 119 (628)
..++|++.+.||+|+||.||+|.+.. .++.||+|.+.... ......+.+|+.+++.++||||+++++.+.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~---- 79 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS---- 79 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc----
Confidence 45779999999999999999998642 34679999886432 233456889999999999999999998853
Q ss_pred cccceeeeeecccccCCchhhhhccc
Q 042887 120 KGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.....++||||+++|+|.+++.+..
T Consensus 80 -~~~~~~lv~e~~~~~~L~~~~~~~~ 104 (277)
T cd05062 80 -QGQPTLVIMELMTRGDLKSYLRSLR 104 (277)
T ss_pred -CCCCeEEEEecCCCCCHHHHHHHcC
Confidence 4678899999999999999986544
No 213
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=98.90 E-value=3.1e-09 Score=107.65 Aligned_cols=88 Identities=19% Similarity=0.242 Sum_probs=74.5
Q ss_pred cCceeecC--CceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 52 ASNMIGQG--SFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 52 ~~~~iG~G--~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
+.++||+| +|++||++.+..+|+.||+|.++... ....+.+.+|+++++.++||||+++++++. .....++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-----~~~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----ADNELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-----ECCEEEE
Confidence 45789999 67899999999999999999997542 234456778999999999999999999864 3678999
Q ss_pred eecccccCCchhhhhcc
Q 042887 128 IYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~ 144 (628)
||||+++|++.+++...
T Consensus 77 v~e~~~~~~l~~~~~~~ 93 (327)
T cd08227 77 VTSFMAYGSAKDLICTH 93 (327)
T ss_pred EEeccCCCcHHHHHHhh
Confidence 99999999999998653
No 214
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=98.90 E-value=3.9e-09 Score=104.77 Aligned_cols=91 Identities=29% Similarity=0.446 Sum_probs=79.0
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|++.+.||+|+||.||+|.+..+|+.||+|.+.... ....+.+.+|+.++++++||||+++++++. .....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFP-----HGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCeeE
Confidence 4888899999999999999998899999999987643 344567899999999999999999999854 478899
Q ss_pred eeecccccCCchhhhhccc
Q 042887 127 LIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~~ 145 (628)
+|+||+ ++++.+++....
T Consensus 76 ~v~e~~-~~~L~~~~~~~~ 93 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDEE 93 (286)
T ss_pred EEeccc-CCCHHHHHHhcC
Confidence 999999 999999886544
No 215
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=98.90 E-value=1.7e-09 Score=105.98 Aligned_cols=92 Identities=25% Similarity=0.499 Sum_probs=79.0
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
..+|++.+.||+|+||.||+|.+.++++.||+|.+.... .....+.+|+++++.++||||+++++++. .....+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPFY 78 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEc-----CCCCcE
Confidence 456888899999999999999999889999999986543 33567899999999999999999999854 367789
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
++|||++++++.+++...
T Consensus 79 lv~e~~~~~~L~~~~~~~ 96 (263)
T cd05052 79 IITEFMTYGNLLDYLREC 96 (263)
T ss_pred EEEEeCCCCcHHHHHHhC
Confidence 999999999999998653
No 216
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=98.89 E-value=4.2e-09 Score=103.86 Aligned_cols=92 Identities=29% Similarity=0.357 Sum_probs=79.5
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
++|++.+.||.|+||.||+|.+..+++.||+|.+.... ......+.+|+++++.++|+||+++++.+. +....|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL-----KGSKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE-----ECCeEE
Confidence 36888899999999999999999999999999987543 334567889999999999999999999854 367899
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
+|+||++++++.+++...
T Consensus 76 ~v~e~~~~~~L~~~~~~~ 93 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG 93 (274)
T ss_pred EEEEeeCCCcHHHHHhhc
Confidence 999999999999998754
No 217
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=98.89 E-value=4e-09 Score=104.18 Aligned_cols=91 Identities=27% Similarity=0.373 Sum_probs=78.8
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
..|+..+.||+|+||.||+|.+..+++.||+|.+.... ......+.+|+.+++++.||||+++++.+.+ ....+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-----GTKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CCEEE
Confidence 45777889999999999999998889999999987543 3445678999999999999999999998643 67899
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
+||||+++|++.+++..
T Consensus 79 lv~e~~~~~~L~~~i~~ 95 (277)
T cd06640 79 IIMEYLGGGSALDLLRA 95 (277)
T ss_pred EEEecCCCCcHHHHHhc
Confidence 99999999999998864
No 218
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.89 E-value=3.6e-09 Score=105.51 Aligned_cols=92 Identities=23% Similarity=0.364 Sum_probs=80.6
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
..+|++.+.||.|+||.||+|.+..+|+.||+|.+........+.+.+|+.+++.++||||+++++.+. .....|
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 92 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL-----VGDELF 92 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEe-----cCceEE
Confidence 356999999999999999999998999999999997655445677889999999999999999999854 467899
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
+|+||++++++.+++.+
T Consensus 93 lv~e~~~~~~L~~~~~~ 109 (296)
T cd06655 93 VVMEYLAGGSLTDVVTE 109 (296)
T ss_pred EEEEecCCCcHHHHHHh
Confidence 99999999999998854
No 219
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=98.89 E-value=4.1e-09 Score=106.70 Aligned_cols=86 Identities=26% Similarity=0.351 Sum_probs=69.8
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHH-HHhhcCCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECE-ALSNVRHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|++..+|+.||+|++.... ......+.+|.. +++.++||||+++++.+ ......|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE-----ecCCEEEEEE
Confidence 46999999999999999999999999997542 233445666665 46778999999999884 4478899999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
||+++|++.+++...
T Consensus 76 e~~~~~~L~~~l~~~ 90 (325)
T cd05604 76 DFVNGGELFFHLQRE 90 (325)
T ss_pred cCCCCCCHHHHHHHc
Confidence 999999998887643
No 220
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=98.89 E-value=4.1e-09 Score=106.59 Aligned_cols=86 Identities=29% Similarity=0.384 Sum_probs=69.8
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHH-HHhhcCCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECE-ALSNVRHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|++..+|+.||+|++.... ......+.+|.. +++.++||||+++++.+ ......|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~-----~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEE-----EeCCEEEEEE
Confidence 46999999999999999999999999997542 223345566655 46788999999999884 4477899999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
||+++|++.+++...
T Consensus 76 e~~~~g~L~~~l~~~ 90 (323)
T cd05575 76 DYVNGGELFFHLQRE 90 (323)
T ss_pred cCCCCCCHHHHHHhc
Confidence 999999999888653
No 221
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=98.89 E-value=4e-09 Score=104.98 Aligned_cols=93 Identities=25% Similarity=0.511 Sum_probs=78.0
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.++|++.+.||+|+||.||+|....+++.||+|.+.... ......+.+|+++++.++|+||+++++++. .....
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~ 78 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIH-----TKKTL 78 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEe-----cCCeE
Confidence 367999999999999999999998899999999987543 223355778999999999999999999854 47789
Q ss_pred eeeecccccCCchhhhhccc
Q 042887 126 ALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~ 145 (628)
++||||+.+ ++.+++.+..
T Consensus 79 ~lv~e~~~~-~L~~~~~~~~ 97 (291)
T cd07844 79 TLVFEYLDT-DLKQYMDDCG 97 (291)
T ss_pred EEEEecCCC-CHHHHHHhCC
Confidence 999999985 8988876544
No 222
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=98.89 E-value=3.1e-09 Score=105.54 Aligned_cols=91 Identities=29% Similarity=0.444 Sum_probs=77.2
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+++++.++||||+++++++ ......
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF-----RRKKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc-----ccCCeE
Confidence 46888999999999999999998889999999886532 22345688999999999999999999995 457889
Q ss_pred eeeecccccCCchhhhhc
Q 042887 126 ALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~ 143 (628)
|+|+||++++++.++...
T Consensus 76 ~lv~e~~~~~~l~~~~~~ 93 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKY 93 (286)
T ss_pred EEEEecCCccHHHHHHhc
Confidence 999999999888877643
No 223
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=98.89 E-value=5e-09 Score=108.22 Aligned_cols=94 Identities=19% Similarity=0.260 Sum_probs=75.2
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|++.+.||+|+||.||+|.+..+|+.||+|.+... .....+++.+|+++++.++||||+++++++...+.......|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478889999999999999999889999999998653 223456788999999999999999999986542222223789
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
+||||+. +++.+++..
T Consensus 81 lv~e~~~-~~l~~~~~~ 96 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS 96 (372)
T ss_pred EEeeccc-cCHHHHHhc
Confidence 9999997 577776643
No 224
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=98.89 E-value=3.2e-09 Score=117.34 Aligned_cols=93 Identities=23% Similarity=0.338 Sum_probs=79.9
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
.++|.+.+.||+|+||.||+|++..+++.||+|+++... ......+.+|+.+++.++||||+++++.+. ...
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-----~~~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQ-----SAN 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE-----ECC
Confidence 468999999999999999999999899999999997542 233467889999999999999999998754 467
Q ss_pred eeeeeecccccCCchhhhhcc
Q 042887 124 FKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~ 144 (628)
..|+||||+.+++|.+++...
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~ 98 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIY 98 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhc
Confidence 899999999999999988643
No 225
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=98.89 E-value=4.2e-09 Score=106.11 Aligned_cols=86 Identities=19% Similarity=0.286 Sum_probs=71.4
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhc-CCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|++..+|+.||+|.++... ....+.+..|..++... +||+|+++++++ ...+..|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE-----EeCCEEEEEE
Confidence 46999999999999999999999999997642 23345667788888765 799999999884 4478999999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
||+++|+|.+++...
T Consensus 76 E~~~~g~L~~~i~~~ 90 (316)
T cd05620 76 EFLNGGDLMFHIQDK 90 (316)
T ss_pred CCCCCCcHHHHHHHc
Confidence 999999999888654
No 226
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=98.89 E-value=4.6e-09 Score=102.34 Aligned_cols=91 Identities=20% Similarity=0.367 Sum_probs=78.9
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|+..+.||+|+||.||+|....+++.+|+|.+.... ....+.+.+|+++++.++||||+++++.+ ......+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF-----LEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE-----ecCCEEE
Confidence 5888899999999999999999899999999987542 33456789999999999999999999874 3477899
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
+||||++++++.+++.+.
T Consensus 76 lv~e~~~~~~L~~~~~~~ 93 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKR 93 (256)
T ss_pred EEEecCCCCCHHHHHHHh
Confidence 999999999999998654
No 227
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=98.89 E-value=3.7e-09 Score=104.10 Aligned_cols=91 Identities=24% Similarity=0.440 Sum_probs=76.4
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc----------chhhhHHHHHHHHhhcCCCCcccccceeeecc
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK----------GAAKSFVTECEALSNVRHRNLIKIITVCSSID 118 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 118 (628)
+|...+.||+|+||.||+|....+|+.||+|.+..... ...+.+.+|+.+++.++|||++++++.+.
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--- 78 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET--- 78 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec---
Confidence 47788999999999999999988999999998864211 12346788999999999999999999854
Q ss_pred ccccceeeeeecccccCCchhhhhcc
Q 042887 119 FKGVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
.....++||||+++|++.+++...
T Consensus 79 --~~~~~~lv~e~~~~~~L~~~l~~~ 102 (272)
T cd06629 79 --TEEYLSIFLEYVPGGSIGSCLRTY 102 (272)
T ss_pred --cCCceEEEEecCCCCcHHHHHhhc
Confidence 467889999999999999988654
No 228
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=98.89 E-value=5.8e-09 Score=102.21 Aligned_cols=94 Identities=24% Similarity=0.390 Sum_probs=78.4
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc-----ccchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK-----QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
.+|++.+.||+|+||.||+|.+..+++.||+|.+... .......+.+|++++++++||||+++++.+.+ ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~---~~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRD---PEE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEc---CCC
Confidence 5789999999999999999999999999999987532 12344678899999999999999999998643 224
Q ss_pred ceeeeeecccccCCchhhhhcc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
...++++||++++++.+++...
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~ 100 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAY 100 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHc
Confidence 5788999999999999888643
No 229
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=98.88 E-value=5e-09 Score=102.14 Aligned_cols=90 Identities=21% Similarity=0.312 Sum_probs=78.1
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|++.+.||+|+||.||.+....+|+.||+|.+... .....+.+.+|+.++++++||||+++++.+ ......+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCeEE
Confidence 488889999999999999999999999999998653 233446789999999999999999999884 4577899
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
+|+||++++++.+++..
T Consensus 76 lv~e~~~~~~l~~~~~~ 92 (256)
T cd08218 76 IVMDYCEGGDLYKKINA 92 (256)
T ss_pred EEEecCCCCcHHHHHHh
Confidence 99999999999988865
No 230
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=98.88 E-value=4.6e-09 Score=106.15 Aligned_cols=86 Identities=26% Similarity=0.366 Sum_probs=69.6
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHH-HHhhcCCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECE-ALSNVRHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|++..+|+.||+|++.... ......+.+|.. +++.++||||+++++.+ ......|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF-----QTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCEEEEEE
Confidence 46999999999999999999999999997532 223345666654 57888999999999884 4477899999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
||+++|++.+++...
T Consensus 76 e~~~~~~L~~~l~~~ 90 (321)
T cd05603 76 DYVNGGELFFHLQRE 90 (321)
T ss_pred cCCCCCCHHHHHHHc
Confidence 999999998877543
No 231
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=98.88 E-value=5.3e-09 Score=102.65 Aligned_cols=91 Identities=25% Similarity=0.445 Sum_probs=76.8
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc---------chhhhHHHHHHHHhhcCCCCcccccceeeeccc
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK---------GAAKSFVTECEALSNVRHRNLIKIITVCSSIDF 119 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 119 (628)
+|.+.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.++++++||||+++++.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---- 76 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL---- 76 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE----
Confidence 47788999999999999999988899999998865321 12356889999999999999999999854
Q ss_pred cccceeeeeecccccCCchhhhhcc
Q 042887 120 KGVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
.....+++|||++++++.+++...
T Consensus 77 -~~~~~~lv~e~~~~~~L~~~l~~~ 100 (267)
T cd06628 77 -DADHLNIFLEYVPGGSVAALLNNY 100 (267)
T ss_pred -eCCccEEEEEecCCCCHHHHHHhc
Confidence 367889999999999999998654
No 232
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.88 E-value=6.9e-09 Score=101.82 Aligned_cols=94 Identities=23% Similarity=0.389 Sum_probs=78.1
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-----cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-----KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
.+|+..+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.+++.++||||+++++.+.. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD---RAE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc---CCC
Confidence 36889999999999999999999999999999986432 1234568899999999999999999987542 234
Q ss_pred ceeeeeecccccCCchhhhhcc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
...++++||+++++|.+++...
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~ 100 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAY 100 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHc
Confidence 6789999999999999988643
No 233
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=98.88 E-value=4.3e-09 Score=102.62 Aligned_cols=91 Identities=30% Similarity=0.508 Sum_probs=78.4
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
.++|++.+.||+|+||.||+|.. .|+.||+|.+..... ..+++.+|+.++++++|+||+++++.+. .....+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVL-----QGNPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEc-----CCCCeE
Confidence 45788999999999999999998 478999999876543 4578999999999999999999999854 367889
Q ss_pred eeecccccCCchhhhhccc
Q 042887 127 LIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~~ 145 (628)
+||||++++++.+++....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~ 95 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRG 95 (256)
T ss_pred EEEEecCCCcHHHHHHhcC
Confidence 9999999999999986543
No 234
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=98.88 E-value=4.6e-09 Score=106.22 Aligned_cols=91 Identities=20% Similarity=0.266 Sum_probs=75.0
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhc-CCCCcccccceeeeccccccce
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
+|++.+.||+|+||.||+|++..+++.||+|.+.... ....+.+..|..++..+ .|++|+++++++ ...+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCF-----QTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE-----ecCCE
Confidence 4788899999999999999999999999999997542 23345567788888877 488999998884 44778
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.|+||||+++|+|.+++...
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~ 95 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQV 95 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHc
Confidence 99999999999999888643
No 235
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=98.88 E-value=3.4e-09 Score=106.12 Aligned_cols=94 Identities=29% Similarity=0.517 Sum_probs=77.0
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcE--EEEEEeecc-ccchhhhHHHHHHHHhhc-CCCCcccccceeeecccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTT--VAVKVMNLK-QKGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~--~avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~ 122 (628)
.++|++.+.||+|+||.||+|.+..++.. +|+|..+.. .....+.+.+|++++.++ +||||+++++++. ..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~-----~~ 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HR 80 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC-----CC
Confidence 35788899999999999999999777764 577766543 233456788999999999 7999999999854 46
Q ss_pred ceeeeeecccccCCchhhhhccc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
...|++|||+++|++.+++....
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~ 103 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSR 103 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcc
Confidence 78999999999999999997654
No 236
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=98.88 E-value=5.8e-09 Score=102.13 Aligned_cols=91 Identities=27% Similarity=0.421 Sum_probs=79.5
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc--chhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK--GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|++.+.||+|+||.||+|....+++.||+|.++.... ...+.+.+|+.+++.++|+||+++++.+. .....+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV-----HREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe-----cCCEEE
Confidence 47888999999999999999988999999999976543 35678999999999999999999999853 467899
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
+|+||++++++.+++...
T Consensus 76 lv~e~~~~~~L~~~~~~~ 93 (264)
T cd06626 76 IFMEYCSGGTLEELLEHG 93 (264)
T ss_pred EEEecCCCCcHHHHHhhc
Confidence 999999999999988653
No 237
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=98.87 E-value=2.2e-09 Score=106.04 Aligned_cols=91 Identities=27% Similarity=0.379 Sum_probs=77.4
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+.|+..+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.++++++||||+++++.+ ......|
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 78 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSY-----LKGTKLW 78 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccc-----ccCCceE
Confidence 34667788999999999999998889999999987543 33456789999999999999999999985 4477899
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
+||||++++++.+++..
T Consensus 79 lv~e~~~~~~L~~~~~~ 95 (277)
T cd06642 79 IIMEYLGGGSALDLLKP 95 (277)
T ss_pred EEEEccCCCcHHHHhhc
Confidence 99999999999988753
No 238
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=98.87 E-value=3.5e-09 Score=104.44 Aligned_cols=94 Identities=21% Similarity=0.459 Sum_probs=78.0
Q ss_pred hCCCCcCceeecCCceeEEEEEECC-----CCcEEEEEEeeccccc-hhhhHHHHHHHHhhcCCCCcccccceeeecccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGE-----TGTTVAVKVMNLKQKG-AAKSFVTECEALSNVRHRNLIKIITVCSSIDFK 120 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~~avK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 120 (628)
.++|+..+.||+|+||.||+|+... +.+.||+|........ ..+.+.+|++++++++||||+++++.+.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----- 78 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCR----- 78 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEEC-----
Confidence 3678899999999999999999753 3467999988654433 4567999999999999999999999854
Q ss_pred ccceeeeeecccccCCchhhhhccc
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.....++||||+++|+|.+++....
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~ 103 (275)
T cd05046 79 EAEPHYMILEYTDLGDLKQFLRATK 103 (275)
T ss_pred CCCcceEEEEecCCCcHHHHHHhcc
Confidence 3677899999999999999987554
No 239
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.87 E-value=7.7e-10 Score=113.30 Aligned_cols=89 Identities=22% Similarity=0.381 Sum_probs=79.7
Q ss_pred eeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeeccccc
Q 042887 55 MIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKC 134 (628)
Q Consensus 55 ~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~ 134 (628)
++|+|.||+||.|++..+...+|||-+........+....|+...+.++|.|||++++.+. .++++-+.||-++|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~s-----enGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVS-----ENGFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccC-----CCCeEEEEeecCCC
Confidence 5899999999999999998899999998766666778899999999999999999999954 47789999999999
Q ss_pred CCchhhhhcccccc
Q 042887 135 GSSEDWMHQSNDKL 148 (628)
Q Consensus 135 g~L~~~l~~~~~~~ 148 (628)
|+|...++...+.+
T Consensus 657 GSLSsLLrskWGPl 670 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGPL 670 (1226)
T ss_pred CcHHHHHHhccCCC
Confidence 99999998887665
No 240
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.87 E-value=3.1e-09 Score=105.34 Aligned_cols=92 Identities=20% Similarity=0.391 Sum_probs=76.3
Q ss_pred CCCCcCceeecCCceeEEEEEEC----CCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLG----ETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~----~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
.+|++.+.||+|+||.||+|.+. .+++.||+|.+.... ......+.+|++++++++||||+++++.+. ..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~ 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT-----QE 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-----cC
Confidence 56888899999999999999853 356789999987533 334467889999999999999999999843 46
Q ss_pred ceeeeeecccccCCchhhhhcc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
...|++|||+++|++.+++...
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~ 101 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMR 101 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhc
Confidence 7889999999999999998643
No 241
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=98.87 E-value=3.3e-09 Score=103.68 Aligned_cols=91 Identities=24% Similarity=0.461 Sum_probs=76.2
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
..++|++.+.||+|+||.||+|.. ++++.||+|.+..... ..+.+.+|+.++++++|+||+++++... ....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~ 75 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT------QEPI 75 (260)
T ss_pred chHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc------cCCc
Confidence 456799999999999999999987 4678899999875433 3467899999999999999999987632 4568
Q ss_pred eeeecccccCCchhhhhcc
Q 042887 126 ALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~ 144 (628)
+++|||+++|++.+++...
T Consensus 76 ~~v~e~~~~~~L~~~~~~~ 94 (260)
T cd05067 76 YIITEYMENGSLVDFLKTP 94 (260)
T ss_pred EEEEEcCCCCCHHHHHHhc
Confidence 9999999999999988643
No 242
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=98.87 E-value=3.9e-09 Score=104.90 Aligned_cols=94 Identities=29% Similarity=0.498 Sum_probs=79.0
Q ss_pred hCCCCcCceeecCCceeEEEEEEC-----CCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKG 121 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 121 (628)
.++|.+.+.||+|+||.||++... .++..+|+|.+........+.+.+|++++++++||||+++++.+. .
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~ 78 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV-----E 78 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----c
Confidence 467889999999999999999852 345669999987655555677999999999999999999999864 3
Q ss_pred cceeeeeecccccCCchhhhhccc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
....+++|||+++|++.+++....
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~ 102 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHG 102 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcC
Confidence 678899999999999999987543
No 243
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=98.87 E-value=2.5e-09 Score=104.61 Aligned_cols=92 Identities=25% Similarity=0.450 Sum_probs=77.1
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
..++|++.+.||+|+||.||+|.+. +++.||+|.+..... ..+.+.+|+.+++.++|+||+++++.+. .....
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVT-----KEEPI 76 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEc-----CCCCc
Confidence 3467899999999999999999974 567899998765332 3567899999999999999999998853 46778
Q ss_pred eeeecccccCCchhhhhcc
Q 042887 126 ALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~ 144 (628)
+++|||+++|++.+++...
T Consensus 77 ~lv~e~~~~~~L~~~l~~~ 95 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSD 95 (261)
T ss_pred EEEEecCCCCcHHHHHHHh
Confidence 9999999999999998653
No 244
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=98.87 E-value=3.2e-09 Score=105.54 Aligned_cols=94 Identities=29% Similarity=0.512 Sum_probs=78.4
Q ss_pred hCCCCcCceeecCCceeEEEEEEC-----CCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFK 120 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 120 (628)
.++|++.+.||+|+||.||+|.+. .+++.||+|.+.... ....+.+.+|+.+++++.||||+++++++.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~----- 78 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCA----- 78 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEc-----
Confidence 467899999999999999999874 256789999987543 233466889999999999999999999854
Q ss_pred ccceeeeeecccccCCchhhhhccc
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.....+++|||+++|++.+++....
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~~~ 103 (288)
T cd05050 79 VGKPMCLLFEYMAYGDLNEFLRHRS 103 (288)
T ss_pred CCCccEEEEecCCCCCHHHHHHHcC
Confidence 3667899999999999999997543
No 245
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.87 E-value=3.3e-10 Score=110.01 Aligned_cols=100 Identities=21% Similarity=0.290 Sum_probs=82.9
Q ss_pred HHHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc-------chhhhHHHHHHHHhhcCCCCccccccee
Q 042887 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK-------GAAKSFVTECEALSNVRHRNLIKIITVC 114 (628)
Q Consensus 42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~~~~~E~~~l~~l~h~nIv~l~~~~ 114 (628)
+-....+.|-+...+|+|||+.||+|.+..-.++||||+-..... ...+..+||.+|.+.++||-||++++++
T Consensus 457 DHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyf 536 (775)
T KOG1151|consen 457 DHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYF 536 (775)
T ss_pred cCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeee
Confidence 334455678888999999999999999988899999998865432 2345678999999999999999999987
Q ss_pred eeccccccceeeeeecccccCCchhhhhccc
Q 042887 115 SSIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 115 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.- +.+.++-|+|||+|.+|.-|++.+.
T Consensus 537 sl----DtdsFCTVLEYceGNDLDFYLKQhk 563 (775)
T KOG1151|consen 537 SL----DTDSFCTVLEYCEGNDLDFYLKQHK 563 (775)
T ss_pred ee----ccccceeeeeecCCCchhHHHHhhh
Confidence 52 4677899999999999999987664
No 246
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=98.87 E-value=2.1e-09 Score=109.23 Aligned_cols=99 Identities=22% Similarity=0.376 Sum_probs=79.2
Q ss_pred HHHHhCCCCcCceeecCCceeEEEEEECC-----CCcEEEEEEeeccc-cchhhhHHHHHHHHhhc-CCCCcccccceee
Q 042887 43 LSKATNNFSASNMIGQGSFGFVYKGKLGE-----TGTTVAVKVMNLKQ-KGAAKSFVTECEALSNV-RHRNLIKIITVCS 115 (628)
Q Consensus 43 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 115 (628)
|..+.++|++.+.||+|+||.||+|.... +++.||+|+++... ....+.+.+|+.++.++ +|+||+++++++.
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~ 81 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT 81 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence 34456789999999999999999997533 45789999986532 23345688999999999 7999999999874
Q ss_pred eccccccceeeeeecccccCCchhhhhccc
Q 042887 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 116 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
. .....+++|||+++|++.+++....
T Consensus 82 ~----~~~~~~~v~ey~~~~~L~~~i~~~~ 107 (337)
T cd05054 82 K----PGGPLMVIVEYCKFGNLSNYLRSKR 107 (337)
T ss_pred c----CCCCEEEEEecCCCCCHHHHHHhcc
Confidence 3 3567889999999999999986544
No 247
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=98.87 E-value=2.8e-09 Score=104.23 Aligned_cols=92 Identities=27% Similarity=0.469 Sum_probs=77.4
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
..++|++.+.||+|+||.||+|.+. +++.||+|.++.... ..+.+.+|+.++++++||||+++++.+. .....
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCT-----LEEPI 76 (261)
T ss_pred chhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEe-----cCCCe
Confidence 3567899999999999999999974 457899999865432 3567899999999999999999998854 36778
Q ss_pred eeeecccccCCchhhhhcc
Q 042887 126 ALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~ 144 (628)
+++|||++++++.+++...
T Consensus 77 ~lv~e~~~~~~L~~~~~~~ 95 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGG 95 (261)
T ss_pred eeeeecccCCcHHHHHhcc
Confidence 9999999999999998654
No 248
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=98.87 E-value=4.6e-09 Score=103.12 Aligned_cols=91 Identities=23% Similarity=0.346 Sum_probs=78.3
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||+|++..+++.+|+|.+.... ......+.+|+.+++.+.||||+++++.+.. .+.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-----DNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe-----CCe
Confidence 46888899999999999999998899999999886532 2344678899999999999999999998543 678
Q ss_pred eeeeecccccCCchhhhhc
Q 042887 125 KALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~ 143 (628)
.+++|||++++++.+++..
T Consensus 77 ~~~v~e~~~~~~L~~~~~~ 95 (267)
T cd08229 77 LNIVLELADAGDLSRMIKH 95 (267)
T ss_pred EEEEEEecCCCCHHHHHHH
Confidence 8999999999999998864
No 249
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=98.86 E-value=6.9e-09 Score=101.61 Aligned_cols=92 Identities=24% Similarity=0.361 Sum_probs=80.5
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc-chhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK-GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
++|++.+.||+|+||.||+|++..+++.||+|.+..... .....+.+|+..+.+++|+||+++++.+. .....+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY-----KEGEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-----cCCeEE
Confidence 368889999999999999999998999999999876543 44577999999999999999999999854 468899
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
++|||+++++|.+++...
T Consensus 76 lv~e~~~~~~L~~~l~~~ 93 (264)
T cd06623 76 IVLEYMDGGSLADLLKKV 93 (264)
T ss_pred EEEEecCCCcHHHHHHHc
Confidence 999999999999998654
No 250
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=98.86 E-value=3e-09 Score=105.66 Aligned_cols=91 Identities=24% Similarity=0.434 Sum_probs=74.9
Q ss_pred CceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeec
Q 042887 53 SNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYE 130 (628)
Q Consensus 53 ~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 130 (628)
.+++|+|.||.||-|+++++|+.||||++++.+ .....+...|+.||+++.||.||.+.-. +++.+..+.|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M-----~ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECM-----FETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEe-----ecCCceEEEEeh
Confidence 588999999999999999999999999998753 3455788999999999999999998766 678999999999
Q ss_pred ccccCCchhhh-hccccccc
Q 042887 131 YMKCGSSEDWM-HQSNDKLE 149 (628)
Q Consensus 131 ~~~~g~L~~~l-~~~~~~~~ 149 (628)
-+.| |+.++| ....++++
T Consensus 644 Kl~G-DMLEMILSsEkgRL~ 662 (888)
T KOG4236|consen 644 KLHG-DMLEMILSSEKGRLP 662 (888)
T ss_pred hhcc-hHHHHHHHhhcccch
Confidence 9875 555554 44444444
No 251
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=98.86 E-value=7.8e-09 Score=101.35 Aligned_cols=90 Identities=21% Similarity=0.476 Sum_probs=75.9
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc------cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ------KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~------~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
+|.+.+.||+|+||.||+|.. .+|+.+|+|.+.... ......+.+|++++++++|+||+++++++.+ .
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD-----D 74 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec-----C
Confidence 478889999999999999987 578899999886432 1223568899999999999999999998653 6
Q ss_pred ceeeeeecccccCCchhhhhcc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
...++++||+++++|.+++.+.
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~ 96 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRF 96 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhc
Confidence 8899999999999999998654
No 252
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=98.86 E-value=1.3e-09 Score=106.50 Aligned_cols=88 Identities=27% Similarity=0.534 Sum_probs=72.5
Q ss_pred ceeecCCceeEEEEEECCCCcE-------EEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTT-------VAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~-------~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+.||+|+||.||+|.+..++.. +|+|.+........+.+.+|+.+++.++||||+++++.+.. ....+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-----~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-----GDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEe-----CCCcE
Confidence 4699999999999998655443 88888765554556778899999999999999999998653 56789
Q ss_pred eeecccccCCchhhhhcccc
Q 042887 127 LIYEYMKCGSSEDWMHQSND 146 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~~~ 146 (628)
+||||+++|+|.+++.....
T Consensus 76 lv~e~~~~g~L~~~l~~~~~ 95 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNKN 95 (258)
T ss_pred EEEecCCCCcHHHHHhcCCC
Confidence 99999999999999976543
No 253
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.86 E-value=5.8e-09 Score=105.98 Aligned_cols=91 Identities=24% Similarity=0.318 Sum_probs=75.3
Q ss_pred CCCcCceeecCCceeEEEEEEC---CCCcEEEEEEeeccc----cchhhhHHHHHHHHhhcC-CCCcccccceeeecccc
Q 042887 49 NFSASNMIGQGSFGFVYKGKLG---ETGTTVAVKVMNLKQ----KGAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFK 120 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~---~~~~~~avK~~~~~~----~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~ 120 (628)
+|++.+.||+|+||.||+++.. .+++.||+|++.... ....+.+.+|+.++..++ ||+|+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF-----Q 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE-----e
Confidence 4888999999999999998864 468899999997532 233456788999999995 99999998874 4
Q ss_pred ccceeeeeecccccCCchhhhhcc
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
.....++||||+++|++.+++...
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~~ 99 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQR 99 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHc
Confidence 578899999999999999988654
No 254
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=98.86 E-value=6.7e-09 Score=104.74 Aligned_cols=92 Identities=24% Similarity=0.398 Sum_probs=79.3
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc---chhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK---GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|+..+.||+|+||.||+|....+++.||+|.+..... ...+.+.+|+++++.++||||+++++.+ .....
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASF-----QTETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeee-----ecCCE
Confidence 368888999999999999999988899999999976432 2456788999999999999999999885 44778
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.+++|||+.+++|.+++...
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~ 95 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQ 95 (316)
T ss_pred EEEEEEecCCCCHHHHHHhC
Confidence 99999999999999988653
No 255
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=98.86 E-value=5e-09 Score=102.12 Aligned_cols=92 Identities=27% Similarity=0.391 Sum_probs=80.3
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
.++|++.+.||+|+||.||+|....+++.+|+|.+..... .+.+.+|++++++++||||+++++.+. .....|
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~ 74 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYF-----KNTDLW 74 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCcEE
Confidence 3679999999999999999999988899999999875433 578999999999999999999999854 468899
Q ss_pred eeecccccCCchhhhhccc
Q 042887 127 LIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~~ 145 (628)
+++||++++++.+++....
T Consensus 75 l~~e~~~~~~L~~~l~~~~ 93 (256)
T cd06612 75 IVMEYCGAGSVSDIMKITN 93 (256)
T ss_pred EEEecCCCCcHHHHHHhCc
Confidence 9999999999999986544
No 256
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=98.86 E-value=4.5e-09 Score=102.76 Aligned_cols=93 Identities=27% Similarity=0.493 Sum_probs=78.4
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
...++|.+.+.||+|+||.||+|... +++.||+|.+..... ..+.+.+|+.++++++|+||+++++.+. ....
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 75 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCS-----EEEP 75 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeee-----cCCc
Confidence 34678999999999999999999985 567899999875432 3467899999999999999999998843 4677
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.+++|||++++++.+++.+.
T Consensus 76 ~~~v~e~~~~~~L~~~i~~~ 95 (261)
T cd05034 76 IYIVTEYMSKGSLLDFLKSG 95 (261)
T ss_pred eEEEEeccCCCCHHHHHhcc
Confidence 89999999999999998654
No 257
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=98.86 E-value=3e-09 Score=106.16 Aligned_cols=94 Identities=26% Similarity=0.459 Sum_probs=76.9
Q ss_pred hCCCCcCceeecCCceeEEEEEECC----------------CCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGE----------------TGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIK 109 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~----------------~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~ 109 (628)
.++|++.+.||+|+||.||++.+.. ++..||+|...... ......+.+|+.++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 4579999999999999999986432 34469999987542 334567899999999999999999
Q ss_pred ccceeeeccccccceeeeeecccccCCchhhhhccc
Q 042887 110 IITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 110 l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
+++++. ..+..+++|||+++|++.+++....
T Consensus 84 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~ 114 (296)
T cd05095 84 LLAVCI-----TSDPLCMITEYMENGDLNQFLSRHE 114 (296)
T ss_pred EEEEEe-----cCCccEEEEEeCCCCcHHHHHHhcC
Confidence 999854 3677899999999999999987643
No 258
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=98.86 E-value=7.6e-09 Score=101.28 Aligned_cols=93 Identities=19% Similarity=0.373 Sum_probs=78.4
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|++.+.+|.|+||.||+|.+..+++.||+|.+... .....+++.+|+.++++++||||+++++.+.. ......+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence 488889999999999999999999999999998653 23345678899999999999999999887542 3356789
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
++|||++++++.+++...
T Consensus 78 ~~~e~~~~~~L~~~l~~~ 95 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKC 95 (265)
T ss_pred EEehhccCCCHHHHHHHH
Confidence 999999999999998654
No 259
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=98.85 E-value=4e-09 Score=102.83 Aligned_cols=91 Identities=22% Similarity=0.448 Sum_probs=75.5
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
++|.+.+.||+|+||.||.|.+.. +..+|+|.+..... ..+.+.+|+.++++++||||+++++++.+ ....++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTK-----QRPIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEcc-----CCCcEE
Confidence 468888999999999999998843 45699998865432 34678999999999999999999998643 567899
Q ss_pred eecccccCCchhhhhccc
Q 042887 128 IYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~~ 145 (628)
+|||+++|++.+++....
T Consensus 77 v~e~~~~~~l~~~i~~~~ 94 (256)
T cd05113 77 VTEYMSNGCLLNYLREHG 94 (256)
T ss_pred EEEcCCCCcHHHHHHhcC
Confidence 999999999999987543
No 260
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=98.85 E-value=6.2e-09 Score=103.22 Aligned_cols=93 Identities=27% Similarity=0.445 Sum_probs=76.5
Q ss_pred CCCcCceeecCCceeEEEEEE----CCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 49 NFSASNMIGQGSFGFVYKGKL----GETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~----~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
-|++.+.||+|+||.||+|.+ ..+++.||+|.++... ....+.+.+|+.+++.++||||+++++++.+ ....
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEec---CCCC
Confidence 478889999999999999985 3467889999987543 3345678999999999999999999998653 2246
Q ss_pred eeeeeecccccCCchhhhhcc
Q 042887 124 FKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~ 144 (628)
..++||||+++++|.+++.+.
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~ 102 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRN 102 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhc
Confidence 789999999999999998654
No 261
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=98.85 E-value=6.8e-09 Score=103.00 Aligned_cols=91 Identities=26% Similarity=0.404 Sum_probs=76.8
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
++|++.+.||+|+||.||+|++..+|+.||+|.+.... ....+.+.+|+.+++.++||||+++++.+. .....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR-----RKRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEe-----eCCEE
Confidence 46889999999999999999999899999999886542 223456789999999999999999999854 46788
Q ss_pred eeeecccccCCchhhhhc
Q 042887 126 ALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~ 143 (628)
++||||++++.+..++..
T Consensus 76 ~~v~e~~~~~~l~~~~~~ 93 (286)
T cd07847 76 HLVFEYCDHTVLNELEKN 93 (286)
T ss_pred EEEEeccCccHHHHHHhC
Confidence 999999999888877643
No 262
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=98.85 E-value=3.2e-09 Score=104.83 Aligned_cols=95 Identities=22% Similarity=0.389 Sum_probs=78.8
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCC-----cEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETG-----TTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDF 119 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~-----~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 119 (628)
..++|++.+.||+|+||.||+|.+...+ +.||+|.+.... ......+.+|+.+++.+.||||+++++++.
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~---- 79 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVS---- 79 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEc----
Confidence 4568999999999999999999986433 789999986543 234457889999999999999999999854
Q ss_pred cccceeeeeecccccCCchhhhhccc
Q 042887 120 KGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.....+++|||+++|+|.+++....
T Consensus 80 -~~~~~~~v~e~~~~~~L~~~l~~~~ 104 (277)
T cd05032 80 -TGQPTLVVMELMAKGDLKSYLRSRR 104 (277)
T ss_pred -CCCCcEEEEecCCCCCHHHHHHhcc
Confidence 4678999999999999999986543
No 263
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=98.85 E-value=7.5e-09 Score=103.42 Aligned_cols=91 Identities=25% Similarity=0.483 Sum_probs=76.9
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc-----chhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK-----GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
+|++.+.||+|+||.||+|.+..+|+.||+|.+..... .....+..|++++++++|+||+++++.+. +..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFG-----HKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheee-----cCC
Confidence 47888999999999999999988999999999976432 23345778999999999999999999854 367
Q ss_pred eeeeeecccccCCchhhhhccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
..++||||+ +|++.+++....
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~ 96 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKS 96 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccC
Confidence 899999999 899999986543
No 264
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=98.84 E-value=6.3e-09 Score=110.99 Aligned_cols=99 Identities=21% Similarity=0.278 Sum_probs=79.7
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecc---cc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSID---FK 120 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---~~ 120 (628)
..++|++.+.||+|+||.||+|++..+|+.||+|++.... ......+.+|+..+..++|+||+++++.+...+ ..
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 3468999999999999999999999999999999987542 334566889999999999999999887654311 11
Q ss_pred ccceeeeeecccccCCchhhhhcc
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
.....++||||+++|+|.+++...
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~ 133 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSR 133 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHh
Confidence 223578999999999999998653
No 265
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=98.84 E-value=7.2e-09 Score=101.05 Aligned_cols=91 Identities=19% Similarity=0.339 Sum_probs=78.2
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|++.+.||+|+||.||+|....+|..||+|.+.... ....+.+.+|+.+++.++|+||+++++.+ ......+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASF-----QENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhhee-----ccCCeEE
Confidence 4788899999999999999999999999999986542 23445788999999999999999999985 3477899
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
+++||++++++.+++.+.
T Consensus 76 lv~e~~~~~~L~~~~~~~ 93 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQ 93 (257)
T ss_pred EEEecCCCCcHHHHHHhc
Confidence 999999999999988653
No 266
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=98.84 E-value=5.4e-09 Score=102.68 Aligned_cols=93 Identities=25% Similarity=0.519 Sum_probs=77.2
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCc---EEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGT---TVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~---~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
.+|+..+.||+|+||.||+|....+++ .+|+|.+.... ....+.+.+|+.++++++||||+++.+.+. ...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 79 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT-----KFK 79 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc-----cCC
Confidence 467888999999999999999876654 69999886542 334567899999999999999999999854 467
Q ss_pred eeeeeecccccCCchhhhhccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
..++||||+++++|.+++....
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~ 101 (268)
T cd05063 80 PAMIITEYMENGALDKYLRDHD 101 (268)
T ss_pred CcEEEEEcCCCCCHHHHHHhcC
Confidence 7899999999999999986544
No 267
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=98.84 E-value=4.3e-09 Score=103.93 Aligned_cols=94 Identities=22% Similarity=0.399 Sum_probs=78.9
Q ss_pred hCCCCcCceeecCCceeEEEEEECC-----CCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGE-----TGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFK 120 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 120 (628)
.++|++.+.||+|+||.||+|.+.. ++..||+|...... ......|.+|+.+++.++|+||+++++++.+
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---- 80 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE---- 80 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc----
Confidence 4678999999999999999999976 67889999886443 3334568999999999999999999998543
Q ss_pred ccceeeeeecccccCCchhhhhccc
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
....+++|||+++|+|.+++....
T Consensus 81 -~~~~~lv~e~~~g~~L~~~i~~~~ 104 (277)
T cd05036 81 -RLPRFILLELMAGGDLKSFLRENR 104 (277)
T ss_pred -CCCcEEEEecCCCCCHHHHHHHhC
Confidence 567799999999999999987654
No 268
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=98.84 E-value=1.2e-08 Score=101.58 Aligned_cols=95 Identities=21% Similarity=0.430 Sum_probs=73.7
Q ss_pred CCCCcCceeecCCceeEEEEEECC-CCcEEEEEEeeccc--cchhhhHHHHHHHHhhc---CCCCcccccceeeeccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGE-TGTTVAVKVMNLKQ--KGAAKSFVTECEALSNV---RHRNLIKIITVCSSIDFKG 121 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~-~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~~~ 121 (628)
++|++.+.||+|+||.||+|++.. +++.||+|.++... ......+.+|+.+++.+ +||||+++++++.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 368999999999999999999854 46889999986542 22334567888877766 6999999999876433345
Q ss_pred cceeeeeecccccCCchhhhhc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~ 143 (628)
....++||||+. +++.+++..
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~ 101 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDK 101 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHh
Confidence 667899999997 588888754
No 269
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=98.84 E-value=7.5e-09 Score=104.81 Aligned_cols=86 Identities=20% Similarity=0.239 Sum_probs=72.3
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhc-CCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|+...+++.||+|+++... ....+.+.+|+.++.++ .||+|+++++++ ......|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF-----QTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEE-----EeCCEEEEEE
Confidence 46999999999999999999999999997642 23445688999999888 599999999984 4477899999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
||+++|+|.+++...
T Consensus 76 e~~~~~~L~~~~~~~ 90 (327)
T cd05617 76 EYVNGGDLMFHMQRQ 90 (327)
T ss_pred eCCCCCcHHHHHHHc
Confidence 999999998887543
No 270
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.84 E-value=3.4e-09 Score=106.68 Aligned_cols=94 Identities=18% Similarity=0.276 Sum_probs=79.6
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc----cc----hhhhHHHHHHHHhhcC---CCCcccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ----KG----AAKSFVTECEALSNVR---HRNLIKIITVCS 115 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~----~~~~~~~E~~~l~~l~---h~nIv~l~~~~~ 115 (628)
..+|...+.+|+|+||+|+.|.+++....|.+|.+.+.+ .| ....+..|+.||..+. |+||++++++
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf-- 637 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF-- 637 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe--
Confidence 456899999999999999999999888889999997642 22 2345788999999997 9999999999
Q ss_pred eccccccceeeeeecc-cccCCchhhhhccc
Q 042887 116 SIDFKGVDFKALIYEY-MKCGSSEDWMHQSN 145 (628)
Q Consensus 116 ~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~ 145 (628)
|++.+++|++||- -++-+|+++|..+.
T Consensus 638 ---FEddd~yyl~te~hg~gIDLFd~IE~kp 665 (772)
T KOG1152|consen 638 ---FEDDDYYYLETEVHGEGIDLFDFIEFKP 665 (772)
T ss_pred ---eecCCeeEEEecCCCCCcchhhhhhccC
Confidence 7789999999998 46678999987654
No 271
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=98.84 E-value=3.4e-09 Score=103.73 Aligned_cols=91 Identities=27% Similarity=0.485 Sum_probs=75.0
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
..+.|++.+.||+|+||.||+|.+..+ ..||+|.++.... ..+.+.+|+++++.++||||+++++.+. ....
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~ 75 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPI 75 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC------CCCc
Confidence 346799999999999999999998655 5699999875332 3457899999999999999999988632 3557
Q ss_pred eeeecccccCCchhhhhcc
Q 042887 126 ALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~ 144 (628)
++||||+++|++.+++.+.
T Consensus 76 ~lv~e~~~~~~L~~~~~~~ 94 (262)
T cd05071 76 YIVTEYMSKGSLLDFLKGE 94 (262)
T ss_pred EEEEEcCCCCcHHHHHhhc
Confidence 8999999999999999753
No 272
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=98.84 E-value=6e-09 Score=104.01 Aligned_cols=94 Identities=24% Similarity=0.403 Sum_probs=78.3
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCC----------------cEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETG----------------TTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIK 109 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~----------------~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~ 109 (628)
+++|++.+.||+|+||.||+|.....+ ..||+|.+.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 568999999999999999999876543 458999987543 334567899999999999999999
Q ss_pred ccceeeeccccccceeeeeecccccCCchhhhhccc
Q 042887 110 IITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 110 l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
+++++. .....+++|||++++++.+++.+..
T Consensus 84 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~ 114 (296)
T cd05051 84 LLGVCT-----VDPPLCMIMEYMENGDLNQFLQKHV 114 (296)
T ss_pred EEEEEe-----cCCCcEEEEecCCCCCHHHHHHhcc
Confidence 999854 3578899999999999999987544
No 273
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=98.84 E-value=8.6e-09 Score=102.15 Aligned_cols=95 Identities=31% Similarity=0.479 Sum_probs=78.3
Q ss_pred CCCCcCceeecCCceeEEEEEECC----CCcEEEEEEeeccccc-hhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGE----TGTTVAVKVMNLKQKG-AAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~----~~~~~avK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
+.|++.+.||+|+||.||+|.+.. +++.||+|.+...... ..+.|.+|+++++.++||||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~---~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK---PGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec---CCC
Confidence 457788999999999999999743 4788999998765432 45789999999999999999999987543 235
Q ss_pred ceeeeeecccccCCchhhhhccc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
...+++|||++++++.+++....
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~ 103 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR 103 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc
Confidence 67899999999999999987554
No 274
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.84 E-value=5.9e-09 Score=107.93 Aligned_cols=86 Identities=20% Similarity=0.241 Sum_probs=73.4
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
..+|++.+.||+|+||.||+|.+..+++.||+|... ...+.+|+.++++++|||||++++++. .....+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~-----~~~~~~ 159 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFT-----YNKFTC 159 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEE-----ECCeeE
Confidence 367999999999999999999999999999999643 245679999999999999999999854 467889
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
+|+|++. +++.+++...
T Consensus 160 lv~e~~~-~~L~~~l~~~ 176 (391)
T PHA03212 160 LILPRYK-TDLYCYLAAK 176 (391)
T ss_pred EEEecCC-CCHHHHHHhc
Confidence 9999986 6788777543
No 275
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=98.84 E-value=8.9e-09 Score=101.36 Aligned_cols=98 Identities=26% Similarity=0.405 Sum_probs=80.2
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhc-CCCCcccccceeeecccc-ccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFK-GVD 123 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~-~~~ 123 (628)
+.+.|++.+.||+|+||.||+|....+++.||+|.+..... ....+.+|+.++.++ +||||+++++.+...... ...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 45678888999999999999999999999999999875432 345688999999998 699999999987642111 135
Q ss_pred eeeeeecccccCCchhhhhcc
Q 042887 124 FKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~ 144 (628)
..|++|||+++|++.+++...
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~ 103 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNT 103 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhc
Confidence 689999999999999988753
No 276
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=98.83 E-value=6.5e-09 Score=101.33 Aligned_cols=91 Identities=23% Similarity=0.446 Sum_probs=75.5
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
.+|++.+.||+|+||.||+|.+. ++..+|+|.+..... ....+.+|+++++.++||||+++++.+. .....++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCT-----KQRPIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEc-----CCCceEE
Confidence 35788899999999999999985 567899998864322 3356889999999999999999998853 4678899
Q ss_pred eecccccCCchhhhhccc
Q 042887 128 IYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~~ 145 (628)
||||++++++.+++....
T Consensus 77 v~e~~~~~~L~~~l~~~~ 94 (256)
T cd05059 77 VTEYMANGCLLNYLRERK 94 (256)
T ss_pred EEecCCCCCHHHHHHhcc
Confidence 999999999999987544
No 277
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=98.83 E-value=5.2e-09 Score=103.72 Aligned_cols=93 Identities=26% Similarity=0.556 Sum_probs=77.3
Q ss_pred CCCCcCceeecCCceeEEEEEECCCC-----cEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETG-----TTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKG 121 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~-----~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 121 (628)
++|++.+.||+|+||.||+|.....+ +.||+|.+.... ......+.+|+.++++++||||+++++++. .
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-----~ 79 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT-----K 79 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc-----C
Confidence 46888999999999999999976544 679999886543 234467899999999999999999999854 3
Q ss_pred cceeeeeecccccCCchhhhhccc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
....+++|||+++|++.+++....
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~ 103 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNS 103 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcC
Confidence 677899999999999999997643
No 278
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=98.83 E-value=7.3e-09 Score=101.53 Aligned_cols=92 Identities=21% Similarity=0.283 Sum_probs=79.7
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
++|+..+.||+|+||.||+|.+..+++.+|+|.+.... ....+++.+|++++++++||||+++++.+. .....+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFY-----NNGDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeee-----cCCEEE
Confidence 36788899999999999999999899999999987653 344567899999999999999999999854 368899
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
+++||+++++|.+++...
T Consensus 76 lv~e~~~~~~L~~~~~~~ 93 (265)
T cd06605 76 ICMEYMDGGSLDKILKEV 93 (265)
T ss_pred EEEEecCCCcHHHHHHHc
Confidence 999999999999998754
No 279
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=98.83 E-value=4.4e-09 Score=104.83 Aligned_cols=98 Identities=23% Similarity=0.436 Sum_probs=79.8
Q ss_pred HHHHhCCCCcCceeecCCceeEEEEEECCCC-----cEEEEEEeeccc-cchhhhHHHHHHHHhhc-CCCCcccccceee
Q 042887 43 LSKATNNFSASNMIGQGSFGFVYKGKLGETG-----TTVAVKVMNLKQ-KGAAKSFVTECEALSNV-RHRNLIKIITVCS 115 (628)
Q Consensus 43 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~-----~~~avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 115 (628)
+....++|++.+.||+|+||.||+|.+...+ ..+|+|.+.... ......+.+|+++++++ +|+||+++++++.
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 86 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT 86 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence 4445678999999999999999999986433 679999987532 23446688999999999 7999999999854
Q ss_pred eccccccceeeeeecccccCCchhhhhccc
Q 042887 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 116 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
..+..+++|||+++|++.+++....
T Consensus 87 -----~~~~~~li~e~~~~~~L~~~l~~~~ 111 (293)
T cd05053 87 -----QEGPLYVVVEYAAHGNLRDFLRARR 111 (293)
T ss_pred -----CCCCeEEEEEeCCCCcHHHHHHhcC
Confidence 4678899999999999999987543
No 280
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=98.82 E-value=9.9e-09 Score=103.90 Aligned_cols=87 Identities=26% Similarity=0.363 Sum_probs=69.3
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHH-HHhhcCCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECE-ALSNVRHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|++..+++.||+|++.... ......+.+|.. +++.++||||+++++++ ...+..|+||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE-----EcCCeEEEEE
Confidence 46999999999999999999999999997532 222334555554 46778999999999884 4478899999
Q ss_pred cccccCCchhhhhccc
Q 042887 130 EYMKCGSSEDWMHQSN 145 (628)
Q Consensus 130 e~~~~g~L~~~l~~~~ 145 (628)
||+++|++.+++....
T Consensus 76 e~~~~~~L~~~~~~~~ 91 (325)
T cd05602 76 DYINGGELFYHLQRER 91 (325)
T ss_pred eCCCCCcHHHHHHhcC
Confidence 9999999998886543
No 281
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.82 E-value=1.4e-10 Score=119.23 Aligned_cols=180 Identities=27% Similarity=0.294 Sum_probs=118.4
Q ss_pred CcCCCCCCCCCeEecccCccccccCccccCC-CCCCeEecCCcccc----------cccCCcccCCcchhcccceEEcCC
Q 042887 403 PHAIGELKNLQGLALVRNSLRGTIPDTLGNL-TLLNRLFLGFNNLQ----------GNVPSSLGNCQNLMTLSRLLDLSG 471 (628)
Q Consensus 403 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~N~l~----------~~~~~~~~~l~~L~~l~~~L~Ls~ 471 (628)
|-.+..+.+|++|.+.++.+... ..+..+ .+|++| +..|.++ +.+-..+.+ ..| ...+.++
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~L-IC~~Sl~Al~~v~ascggd~~ns~~W-n~L----~~a~fsy 173 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKL-ICHNSLDALRHVFASCGGDISNSPVW-NKL----ATASFSY 173 (1096)
T ss_pred CceeccccceeeEEecCcchhhh--hhhHHHHHhhhhh-hhhccHHHHHHHHHHhccccccchhh-hhH----hhhhcch
Confidence 44567788999999999888731 111111 122222 1122221 011111111 123 4567888
Q ss_pred CcCccccchhhhccCCCCEeeCcCCcCcccCCccccCCCCCCeEECcCceeeeecCccccCCCCCCEEECCCCcccccCc
Q 042887 472 NLLGGSIPLEVGNLRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRNNLSGQIP 551 (628)
Q Consensus 472 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 551 (628)
|++. .+..++.-++.|+.|||++|+++.. +.+..++.|+.|||++|.+....--...+.. |+.|.+++|.++. -
T Consensus 174 N~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~t--L 247 (1096)
T KOG1859|consen 174 NRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTT--L 247 (1096)
T ss_pred hhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeecccHHHh--h
Confidence 8887 5666777788899999999998743 3778888999999999998833333334444 8899999998873 3
Q ss_pred hhhhcccCCCeEeccCCcCccc--CCCCCCCCCCCcccccCCCCCcc
Q 042887 552 KYLENLLFLAYLNLSYNHFEGE--VPRKGVFGNRTGIHLIGNERLCG 596 (628)
Q Consensus 552 ~~~~~l~~L~~L~ls~N~l~~~--~p~~~~~~~l~~~~~~~n~~~c~ 596 (628)
..+.+|.+|+.||+++|-|.+- +...+.+..+..+++.|||.-|.
T Consensus 248 ~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 248 RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 4578888899999999988763 33345566778888999987774
No 282
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=98.82 E-value=5.8e-09 Score=104.41 Aligned_cols=96 Identities=22% Similarity=0.407 Sum_probs=78.1
Q ss_pred HHHhCCCCcCceeecCCceeEEEEEE-----CCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhc-CCCCcccccceeee
Q 042887 44 SKATNNFSASNMIGQGSFGFVYKGKL-----GETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNV-RHRNLIKIITVCSS 116 (628)
Q Consensus 44 ~~~~~~~~~~~~iG~G~~g~V~~~~~-----~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 116 (628)
....++|++.+.||+|+||.||+|.+ ..++..||+|+++... ....+.+.+|+.+++++ +||||+++++.+..
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 34456799999999999999999975 2345679999987543 33456789999999999 79999999998643
Q ss_pred ccccccceeeeeecccccCCchhhhhcc
Q 042887 117 IDFKGVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 117 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
....+++|||+++|+|.+++...
T Consensus 111 -----~~~~~lv~e~~~~~~L~~~i~~~ 133 (302)
T cd05055 111 -----GGPILVITEYCCYGDLLNFLRRK 133 (302)
T ss_pred -----CCceEEEEEcCCCCcHHHHHHhC
Confidence 66789999999999999998653
No 283
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=98.82 E-value=9.4e-09 Score=102.33 Aligned_cols=92 Identities=25% Similarity=0.479 Sum_probs=76.2
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
..+|.+.+.||+|+||.||+|.+..+|+.||+|.+.... ......+.+|+.+++.++|+||+++++++. .....
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-----~~~~~ 78 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIH-----TKETL 78 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEe-----cCCeE
Confidence 467999999999999999999998899999999986543 233346789999999999999999999854 46788
Q ss_pred eeeecccccCCchhhhhcc
Q 042887 126 ALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~ 144 (628)
++||||+. +++.+++...
T Consensus 79 ~lv~e~~~-~~l~~~~~~~ 96 (291)
T cd07870 79 TFVFEYMH-TDLAQYMIQH 96 (291)
T ss_pred EEEEeccc-CCHHHHHHhC
Confidence 99999996 6776666543
No 284
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=98.82 E-value=9.8e-09 Score=101.68 Aligned_cols=105 Identities=25% Similarity=0.393 Sum_probs=83.7
Q ss_pred cHHHHHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhc-CCCCcccccceeeec
Q 042887 39 SYADLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV-RHRNLIKIITVCSSI 117 (628)
Q Consensus 39 ~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 117 (628)
+..+...+.+.|++.+.+|+|+||.||+|++..+++.+|+|....... ....+.+|+.+++++ +||||+++++.+...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 344445567889999999999999999999999999999999865432 335688899999998 699999999886431
Q ss_pred c-ccccceeeeeecccccCCchhhhhcc
Q 042887 118 D-FKGVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 118 ~-~~~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
. .......+++|||+++|++.+++...
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~ 113 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNT 113 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHc
Confidence 1 12356789999999999999988653
No 285
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=98.82 E-value=1.1e-08 Score=100.38 Aligned_cols=92 Identities=26% Similarity=0.359 Sum_probs=79.4
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
++|++.+.||.|+||.||+|....++..+|+|++.... ......+.+|+.+++.++|+||+++++.+. .....+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV-----VGDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEe-----eCCEEE
Confidence 47899999999999999999998889999999986543 234567899999999999999999998754 467889
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
++||+++++++.+++...
T Consensus 76 iv~e~~~~~~l~~~~~~~ 93 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSS 93 (267)
T ss_pred EEEeccCCCcHHHHHHHh
Confidence 999999999999998653
No 286
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=98.82 E-value=7.1e-09 Score=101.95 Aligned_cols=93 Identities=22% Similarity=0.365 Sum_probs=75.8
Q ss_pred hCCCCcCceeecCCceeEEEEEECCC---CcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGET---GTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~---~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
.++|.+.+.||+|+||.||+|.+... ...||+|...... ....+.+.+|+.++++++||||+++++.+. .
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~------~ 78 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT------E 78 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEc------C
Confidence 34688889999999999999997543 3468999886543 345568999999999999999999998754 3
Q ss_pred ceeeeeecccccCCchhhhhccc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
...++||||+++|++.+++....
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~ 101 (270)
T cd05056 79 NPVWIVMELAPLGELRSYLQVNK 101 (270)
T ss_pred CCcEEEEEcCCCCcHHHHHHhCC
Confidence 45689999999999999997544
No 287
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=98.82 E-value=9.9e-09 Score=101.76 Aligned_cols=91 Identities=26% Similarity=0.544 Sum_probs=76.7
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
+|+..+.||+|+||.||+|++..+|+.||+|.++... ....+.+.+|+.++++++||||+++++.+.+ ....++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHT-----ENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEee-----CCcEEE
Confidence 4888899999999999999999899999999997653 2334667889999999999999999998653 677899
Q ss_pred eecccccCCchhhhhccc
Q 042887 128 IYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~~ 145 (628)
||||+++ ++.+++....
T Consensus 76 v~e~~~~-~l~~~~~~~~ 92 (284)
T cd07836 76 VFEYMDK-DLKKYMDTHG 92 (284)
T ss_pred EEecCCc-cHHHHHHhcC
Confidence 9999985 7888876543
No 288
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.82 E-value=8.2e-09 Score=102.04 Aligned_cols=93 Identities=24% Similarity=0.389 Sum_probs=79.5
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhcC-CCCcccccceeeeccccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~ 123 (628)
++|++.+.||+|+||.||+|....+|+.||+|+.... .....+.+.+|+.+++++. ||||+++++.+ ....
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF-----QDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh-----cCCc
Confidence 4689999999999999999999989999999998653 2233466889999999998 99999999984 4578
Q ss_pred eeeeeecccccCCchhhhhccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
..+++|||++++++.+++.+..
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~ 97 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYG 97 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcC
Confidence 8999999999999999986543
No 289
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=98.81 E-value=1.2e-08 Score=101.32 Aligned_cols=94 Identities=23% Similarity=0.455 Sum_probs=74.2
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhc---CCCCcccccceeeeccccccc
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNV---RHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~~~~~ 123 (628)
+|++.+.||+|+||.||+|++..+|+.||+|.++... ......+.+|+.+++.+ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4888899999999999999999999999999987542 22334567788777665 699999999987653334456
Q ss_pred eeeeeecccccCCchhhhhc
Q 042887 124 FKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~ 143 (628)
..+++|||+++ ++.+++..
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~ 99 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDK 99 (288)
T ss_pred eEEEEEccccc-CHHHHHHh
Confidence 78999999985 78777754
No 290
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=98.81 E-value=7.6e-09 Score=102.36 Aligned_cols=94 Identities=22% Similarity=0.455 Sum_probs=78.7
Q ss_pred hCCCCcCceeecCCceeEEEEEEC-----CCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLG-----ETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKG 121 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 121 (628)
..+|+..++||+|+||.||+|... .++..+|+|............+.+|+++++.++|+||+++++++. .
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~ 78 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCT-----E 78 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEe-----c
Confidence 356788899999999999999753 346689999887665556678999999999999999999998854 3
Q ss_pred cceeeeeecccccCCchhhhhccc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
....+++|||+++|++.+++....
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~ 102 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHG 102 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcC
Confidence 677899999999999999997554
No 291
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=98.81 E-value=8.2e-09 Score=101.47 Aligned_cols=86 Identities=24% Similarity=0.450 Sum_probs=69.8
Q ss_pred ceeecCCceeEEEEEECC--CCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeec
Q 042887 54 NMIGQGSFGFVYKGKLGE--TGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYE 130 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~--~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 130 (628)
+.||+|+||.||+|.+.. ++..+|+|.++... ......+.+|+.++++++||||+++++.+. .....++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCT-----EVTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----CCCCcEEEEE
Confidence 368999999999998643 44679999886543 233457889999999999999999999854 3567899999
Q ss_pred ccccCCchhhhhcc
Q 042887 131 YMKCGSSEDWMHQS 144 (628)
Q Consensus 131 ~~~~g~L~~~l~~~ 144 (628)
|+++|+|.+++...
T Consensus 76 ~~~~g~L~~~l~~~ 89 (269)
T cd05087 76 FCPLGDLKGYLRSC 89 (269)
T ss_pred CCCCCcHHHHHHHh
Confidence 99999999998654
No 292
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=98.81 E-value=7.2e-09 Score=103.17 Aligned_cols=91 Identities=23% Similarity=0.333 Sum_probs=77.2
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
+.|.....||+|+||.||++....+++.||+|.+........+.+.+|+..++.++||||+++++.+. .....++
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~l 96 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL-----VGDELWV 96 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhee-----cCCeEEE
Confidence 34455577999999999999998899999999987655455677899999999999999999999854 4678899
Q ss_pred eecccccCCchhhhhc
Q 042887 128 IYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~ 143 (628)
||||++++++.+++..
T Consensus 97 v~e~~~~~~L~~~~~~ 112 (292)
T cd06658 97 VMEFLEGGALTDIVTH 112 (292)
T ss_pred EEeCCCCCcHHHHHhc
Confidence 9999999999988753
No 293
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=98.81 E-value=1.1e-08 Score=100.80 Aligned_cols=95 Identities=27% Similarity=0.528 Sum_probs=75.2
Q ss_pred CCcCceeecCCceeEEEEEECCC---CcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecc-ccccc
Q 042887 50 FSASNMIGQGSFGFVYKGKLGET---GTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSID-FKGVD 123 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~---~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~~~ 123 (628)
|++.+.||+|+||.||+|....+ +..||+|.++... ......+.+|++.++.++||||+++++.+.... .....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56788999999999999997643 3789999987542 234567899999999999999999998865421 12334
Q ss_pred eeeeeecccccCCchhhhhcc
Q 042887 124 FKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~ 144 (628)
..++++||+++|++.+++...
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~ 101 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYS 101 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHh
Confidence 579999999999999888554
No 294
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=98.81 E-value=1.2e-08 Score=101.32 Aligned_cols=89 Identities=26% Similarity=0.515 Sum_probs=75.5
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|++.+.||+|+||.||+|++..+++.||+|.+.... ....+.+.+|+.+++.++||||+++++.+. .....|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM-----QESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe-----eCCeEE
Confidence 5788899999999999999998899999999986542 233467889999999999999999999854 467889
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
+||||++ +++.+++..
T Consensus 76 ~v~e~~~-~~l~~~~~~ 91 (285)
T cd07861 76 LIFEFLS-MDLKKYLDS 91 (285)
T ss_pred EEEecCC-CCHHHHHhc
Confidence 9999998 578888754
No 295
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.81 E-value=5e-09 Score=105.19 Aligned_cols=96 Identities=21% Similarity=0.393 Sum_probs=77.8
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECC-------CCcEEEEEEeeccc-cchhhhHHHHHHHHhhc-CCCCcccccceee
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGE-------TGTTVAVKVMNLKQ-KGAAKSFVTECEALSNV-RHRNLIKIITVCS 115 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~-------~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 115 (628)
...++|.+.+.||+|+||.||+|++.. ++..+|+|.+.... ......+.+|+.+++.+ +||||+++++++.
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 334679999999999999999998643 23569999987542 23445688999999999 7999999999864
Q ss_pred eccccccceeeeeecccccCCchhhhhccc
Q 042887 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 116 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
. .+..|+||||+++|+|.+++....
T Consensus 95 ~-----~~~~~lv~e~~~~~~L~~~i~~~~ 119 (307)
T cd05098 95 Q-----DGPLYVIVEYASKGNLREYLRARR 119 (307)
T ss_pred c-----CCceEEEEecCCCCcHHHHHHhcC
Confidence 3 678899999999999999997643
No 296
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=98.81 E-value=9.3e-09 Score=101.96 Aligned_cols=91 Identities=26% Similarity=0.490 Sum_probs=75.7
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|++.+.||+|+||.||+|++..+|+.||+|.++... ......+.+|++++++++||||+++++.+ .+....+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVL-----HSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHh-----ccCCceE
Confidence 4788899999999999999999999999999987542 22345678899999999999999999984 4577899
Q ss_pred eeecccccCCchhhhhccc
Q 042887 127 LIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~~ 145 (628)
+++||+. +++.+++....
T Consensus 76 lv~e~~~-~~l~~~~~~~~ 93 (284)
T cd07839 76 LVFEYCD-QDLKKYFDSCN 93 (284)
T ss_pred EEEecCC-CCHHHHHHhcC
Confidence 9999997 47777775443
No 297
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=98.80 E-value=1.5e-08 Score=99.90 Aligned_cols=97 Identities=26% Similarity=0.375 Sum_probs=81.1
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhc-CCCCcccccceeeeccc-cccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDF-KGVD 123 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~-~~~~ 123 (628)
+.++|++.+.||+|+||.||+|.+..+++.+|+|.+..... ..+.+.+|+.+++++ .|+||+++++.+..... ....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 46789999999999999999999988899999999876543 346788999999999 69999999998764221 2356
Q ss_pred eeeeeecccccCCchhhhhc
Q 042887 124 FKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~ 143 (628)
..+++|||++++++.+++..
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~ 102 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKG 102 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHH
Confidence 68999999999999988764
No 298
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=98.80 E-value=1e-08 Score=101.42 Aligned_cols=94 Identities=28% Similarity=0.509 Sum_probs=77.7
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCc----EEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGT----TVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKG 121 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~----~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 121 (628)
..+|++.+.||+|+||.||+|.+..+|+ .+|+|...... ......+.+|+..+++++||||+++++.+..
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 80 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS----- 80 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 3568889999999999999999876665 58999876543 3345678899999999999999999998642
Q ss_pred cceeeeeecccccCCchhhhhcccc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQSND 146 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~ 146 (628)
...+++|||+++|++.+++.+...
T Consensus 81 -~~~~~v~e~~~~g~L~~~l~~~~~ 104 (279)
T cd05057 81 -SQVQLITQLMPLGCLLDYVRNHKD 104 (279)
T ss_pred -CceEEEEecCCCCcHHHHHHhccC
Confidence 678999999999999999876543
No 299
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=98.80 E-value=8.4e-09 Score=102.95 Aligned_cols=91 Identities=22% Similarity=0.348 Sum_probs=77.0
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
..|+....||+|+||.||+|....+++.||+|.+........+.+.+|+.+++.+.||||+++++.+. .....|+
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~i 95 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL-----VGEELWV 95 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhee-----eCCeEEE
Confidence 44555567999999999999998899999999987654445567889999999999999999999854 4678999
Q ss_pred eecccccCCchhhhhc
Q 042887 128 IYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~ 143 (628)
++||++++++.+++..
T Consensus 96 v~e~~~~~~L~~~~~~ 111 (297)
T cd06659 96 LMEFLQGGALTDIVSQ 111 (297)
T ss_pred EEecCCCCCHHHHHhh
Confidence 9999999999887643
No 300
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=98.80 E-value=1.4e-08 Score=99.02 Aligned_cols=91 Identities=18% Similarity=0.308 Sum_probs=76.8
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|++.+.||+|+||.||++.+..+++.||+|.+.... ....+.+.+|+.++++++|+|++++++.+. ......+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE----GEDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeec----CCCCEEE
Confidence 5889999999999999999999899999999986542 334567889999999999999999987642 1345689
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
++|||++++++.+++..
T Consensus 77 lv~e~~~~~~l~~~l~~ 93 (257)
T cd08223 77 IVMGFCEGGDLYHKLKE 93 (257)
T ss_pred EEecccCCCcHHHHHHH
Confidence 99999999999999865
No 301
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.80 E-value=1.2e-08 Score=104.99 Aligned_cols=96 Identities=23% Similarity=0.271 Sum_probs=76.3
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeec-cccc
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSI-DFKG 121 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-~~~~ 121 (628)
...++|++.+.||+|+||.||+|.+..+|+.||+|.+... .......+.+|+.+++.++||||+++++++... .+..
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 3457899999999999999999999999999999998653 233456788999999999999999999986531 1223
Q ss_pred cceeeeeecccccCCchhhh
Q 042887 122 VDFKALIYEYMKCGSSEDWM 141 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l 141 (628)
....|+||||+.+ ++.+.+
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~ 116 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVI 116 (359)
T ss_pred cceeEEEEeCCCc-CHHHHH
Confidence 3467999999976 455444
No 302
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=98.80 E-value=1.2e-08 Score=100.86 Aligned_cols=90 Identities=30% Similarity=0.430 Sum_probs=76.9
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc-ccchhhhHHHHHHHHhhcC---CCCcccccceeeeccccccce
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK-QKGAAKSFVTECEALSNVR---HRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~~~~ 124 (628)
.|+..+.||+|+||.||+|.+..+++.||+|.++.. .....+.+.+|+.++++++ |||++++++.+. ....
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-----~~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL-----KGPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-----eCCE
Confidence 477888999999999999999999999999998654 2334567889999999996 999999999854 4678
Q ss_pred eeeeecccccCCchhhhhc
Q 042887 125 KALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~ 143 (628)
.+++|||+++++|.+++..
T Consensus 77 ~~lv~e~~~~~~L~~~~~~ 95 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKA 95 (277)
T ss_pred EEEEEecCCCCcHHHHHHc
Confidence 8999999999999988754
No 303
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=98.80 E-value=7.3e-09 Score=101.24 Aligned_cols=90 Identities=28% Similarity=0.486 Sum_probs=75.2
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
..++|++.+.||+|+||.||+|... ++..+|+|.+..... ..+.+.+|+.++++++|++++++++.+. ....
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~ 75 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS------EEPI 75 (260)
T ss_pred chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC------CCCc
Confidence 3567999999999999999999875 567799999875433 3467899999999999999999988742 3457
Q ss_pred eeeecccccCCchhhhhc
Q 042887 126 ALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~ 143 (628)
+++|||++++++.+++..
T Consensus 76 ~lv~e~~~~~~L~~~~~~ 93 (260)
T cd05070 76 YIVTEYMSKGSLLDFLKD 93 (260)
T ss_pred EEEEEecCCCcHHHHHHh
Confidence 899999999999999865
No 304
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=98.80 E-value=1.1e-08 Score=102.23 Aligned_cols=93 Identities=24% Similarity=0.510 Sum_probs=76.8
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCc--EEEEEEeecc-ccchhhhHHHHHHHHhhc-CCCCcccccceeeeccccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGT--TVAVKVMNLK-QKGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~--~~avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~ 123 (628)
++|++.+.||+|+||.||+|....++. .+|+|.++.. .....+.+.+|+.++.++ +||||+++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-----~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACE-----NRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEc-----cCC
Confidence 578999999999999999999877764 4788887642 333456789999999999 6999999999854 467
Q ss_pred eeeeeecccccCCchhhhhccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
..++++||+++|++.+++....
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~ 98 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSR 98 (297)
T ss_pred cceEEEEecCCCcHHHHHHhcc
Confidence 7899999999999999996543
No 305
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.79 E-value=5.9e-09 Score=104.50 Aligned_cols=96 Identities=22% Similarity=0.411 Sum_probs=78.1
Q ss_pred HHhCCCCcCceeecCCceeEEEEEEC-------CCCcEEEEEEeeccc-cchhhhHHHHHHHHhhc-CCCCcccccceee
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLG-------ETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNV-RHRNLIKIITVCS 115 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~-------~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 115 (628)
...++|.+.+.||+|+||.||+|++. .++..||+|...... ....+.+.+|+.+++.+ +||||+++++.+.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 34567899999999999999999853 234579999886532 33456789999999999 7999999999854
Q ss_pred eccccccceeeeeecccccCCchhhhhccc
Q 042887 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 116 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.....|++|||+++|+|.+++.+..
T Consensus 92 -----~~~~~~lv~e~~~~~~L~~~l~~~~ 116 (304)
T cd05101 92 -----QDGPLYVIVEYASKGNLREYLRARR 116 (304)
T ss_pred -----cCCceEEEEecCCCCcHHHHHHhcC
Confidence 3678899999999999999997643
No 306
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=98.79 E-value=1.4e-08 Score=100.60 Aligned_cols=89 Identities=28% Similarity=0.548 Sum_probs=75.3
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|+..+.||+|+||.||+|++..+|+.||+|.+.... ......+.+|++++++++||||+++++++ ...+..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhc-----ccCCcEE
Confidence 4788899999999999999999899999999886542 23345788999999999999999999984 4577899
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
+||||+. +++.+++..
T Consensus 76 ~v~e~~~-~~l~~~~~~ 91 (284)
T cd07860 76 LVFEFLH-QDLKKFMDA 91 (284)
T ss_pred EEeeccc-cCHHHHHHh
Confidence 9999996 578877754
No 307
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=98.79 E-value=1.5e-08 Score=100.66 Aligned_cols=95 Identities=26% Similarity=0.375 Sum_probs=82.6
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
...+.|+..+.+|+|+||.||+|.+..+++.||+|.+..... ..+.+.+|++.++.++|+||+++++.+.. ...
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 89 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLV-----GDE 89 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEE-----CCE
Confidence 345678888999999999999999988899999999976544 45678899999999999999999998653 688
Q ss_pred eeeeecccccCCchhhhhccc
Q 042887 125 KALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.|+++||+++++|.+++....
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~ 110 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQNF 110 (286)
T ss_pred EEEEEeccCCCcHHHHHHHhc
Confidence 999999999999999987654
No 308
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=98.79 E-value=8.6e-09 Score=100.75 Aligned_cols=92 Identities=25% Similarity=0.426 Sum_probs=76.3
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
...++|++.+.||+|+||.||+|.+. .+..+|+|.+.... ...+.+.+|+.+++.++|+||+++++.+. . ..
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~-~~ 74 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-----K-EP 74 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEc-----C-CC
Confidence 45678999999999999999999874 45679999886533 23467899999999999999999988743 2 66
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.+++|||+++|++.+++...
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~ 94 (260)
T cd05073 75 IYIITEFMAKGSLLDFLKSD 94 (260)
T ss_pred eEEEEEeCCCCcHHHHHHhC
Confidence 79999999999999998653
No 309
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=98.78 E-value=1.2e-08 Score=101.60 Aligned_cols=91 Identities=32% Similarity=0.457 Sum_probs=74.6
Q ss_pred CCCcCceeecCCceeEEEEEECC-----CCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGE-----TGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~-----~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
+|++.+.||+|+||.||+|.... ....+|+|.+.... ....+.+.+|+.+++.++||||+++++.+. ..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACS-----QD 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-----cC
Confidence 47888999999999999998743 23568998886543 234567899999999999999999999854 36
Q ss_pred ceeeeeecccccCCchhhhhcc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
...++++||+.+|++.+++...
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~ 97 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRES 97 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhc
Confidence 7789999999999999998654
No 310
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.78 E-value=7.9e-09 Score=105.08 Aligned_cols=96 Identities=21% Similarity=0.389 Sum_probs=77.0
Q ss_pred HHHhCCCCcCceeecCCceeEEEEEECCC-------CcEEEEEEeeccc-cchhhhHHHHHHHHhhc-CCCCccccccee
Q 042887 44 SKATNNFSASNMIGQGSFGFVYKGKLGET-------GTTVAVKVMNLKQ-KGAAKSFVTECEALSNV-RHRNLIKIITVC 114 (628)
Q Consensus 44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~-------~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~ 114 (628)
.....+|.+.+.||+|+||.||+|++... +..||+|...... ....+.+.+|+.+++++ +||||+++++.+
T Consensus 8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (334)
T cd05100 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC 87 (334)
T ss_pred ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence 33345689999999999999999986432 2368999886432 33456789999999999 799999999986
Q ss_pred eeccccccceeeeeecccccCCchhhhhcc
Q 042887 115 SSIDFKGVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 115 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
.. ....++++||+++|+|.+++.+.
T Consensus 88 ~~-----~~~~~lv~e~~~~g~L~~~l~~~ 112 (334)
T cd05100 88 TQ-----DGPLYVLVEYASKGNLREYLRAR 112 (334)
T ss_pred cc-----CCceEEEEecCCCCcHHHHHHhc
Confidence 43 56789999999999999998754
No 311
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=98.78 E-value=1.5e-08 Score=99.68 Aligned_cols=94 Identities=26% Similarity=0.547 Sum_probs=74.0
Q ss_pred CCcCceeecCCceeEEEEEECCCCc--EEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeec-cccccce
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETGT--TVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSI-DFKGVDF 124 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~~--~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-~~~~~~~ 124 (628)
|.+.+.||+|+||.||+|++..++. .+|+|.++.. .....+.+.+|+.+++.++||||+++++.+... .......
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4567889999999999999876665 5899988653 334467789999999999999999999876431 1122345
Q ss_pred eeeeecccccCCchhhhhc
Q 042887 125 KALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~ 143 (628)
.+++|||+++|++.+++..
T Consensus 81 ~~~v~e~~~~~~l~~~~~~ 99 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLY 99 (272)
T ss_pred cEEEEEeCCCCcHHHHHHH
Confidence 7899999999999988753
No 312
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=98.78 E-value=1.5e-08 Score=100.04 Aligned_cols=85 Identities=21% Similarity=0.306 Sum_probs=71.9
Q ss_pred eecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeeccc
Q 042887 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYM 132 (628)
Q Consensus 56 iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 132 (628)
||+|+||.||+|.+..+|+.||+|.+.... ......+.+|+++++.++||||+++++.+ +..+..|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAF-----ETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEE-----ecCCeEEEEEecC
Confidence 699999999999999899999999986532 22345678899999999999999998884 4467899999999
Q ss_pred ccCCchhhhhccc
Q 042887 133 KCGSSEDWMHQSN 145 (628)
Q Consensus 133 ~~g~L~~~l~~~~ 145 (628)
++++|.+++....
T Consensus 76 ~~~~L~~~l~~~~ 88 (277)
T cd05577 76 NGGDLKYHIYNVG 88 (277)
T ss_pred CCCcHHHHHHHcC
Confidence 9999999886544
No 313
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=98.78 E-value=1.5e-08 Score=98.26 Aligned_cols=86 Identities=28% Similarity=0.498 Sum_probs=71.2
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeeccc
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYM 132 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 132 (628)
+.||+|+||.||+|... +++.+|+|...... ......+.+|+++++.++||||+++++.+.. ....++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ-----RQPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec-----CCccEEEEECC
Confidence 46899999999999874 68899999886543 2234568899999999999999999998653 56789999999
Q ss_pred ccCCchhhhhccc
Q 042887 133 KCGSSEDWMHQSN 145 (628)
Q Consensus 133 ~~g~L~~~l~~~~ 145 (628)
++|++.+++....
T Consensus 75 ~~~~L~~~~~~~~ 87 (250)
T cd05085 75 PGGDFLSFLRKKK 87 (250)
T ss_pred CCCcHHHHHHhcC
Confidence 9999999886543
No 314
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.78 E-value=1.8e-08 Score=102.57 Aligned_cols=95 Identities=20% Similarity=0.351 Sum_probs=78.3
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc-ccchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK-QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.++|++.+.||+|+||.||+|.+..+|+.||+|.+... .......+.+|+.++++++||||+++++++....+......
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46799999999999999999999999999999998643 23345668899999999999999999998765445555678
Q ss_pred eeeecccccCCchhhhh
Q 042887 126 ALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~ 142 (628)
|+++||+.+ ++.+.+.
T Consensus 84 ~lv~e~~~~-~l~~~~~ 99 (336)
T cd07849 84 YIVQELMET-DLYKLIK 99 (336)
T ss_pred EEEehhccc-CHHHHHh
Confidence 999999974 7766664
No 315
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.78 E-value=1.6e-08 Score=106.53 Aligned_cols=92 Identities=24% Similarity=0.360 Sum_probs=72.0
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccc---ccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDF---KGV 122 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~---~~~ 122 (628)
..++|++.+.||+|+||.||+|.+..+++.||||.+.... ....+|+.+|+.++|||||++++++....+ +..
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3467999999999999999999999999999999885432 234579999999999999999887543111 223
Q ss_pred ceeeeeecccccCCchhhhh
Q 042887 123 DFKALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~ 142 (628)
.+.++||||+++ ++.+++.
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~ 158 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMK 158 (440)
T ss_pred eEEEEEEecCCc-cHHHHHH
Confidence 457799999985 6766664
No 316
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=98.77 E-value=1.7e-08 Score=98.46 Aligned_cols=91 Identities=27% Similarity=0.563 Sum_probs=77.1
Q ss_pred CCcCceeecCCceeEEEEEECCCC----cEEEEEEeeccccc-hhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETG----TTVAVKVMNLKQKG-AAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~----~~~avK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
+++.+.||.|+||.||+|.+...+ ..||+|.+...... ..+.+.+|++.++.+.|+||+++++.+. ....
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCT-----EEEP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEc-----CCCe
Confidence 356788999999999999998766 88999999765432 5678999999999999999999999854 3578
Q ss_pred eeeeecccccCCchhhhhccc
Q 042887 125 KALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.+++|||++++++.+++....
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~ 96 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNR 96 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhh
Confidence 999999999999999987544
No 317
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=98.77 E-value=1.5e-08 Score=98.76 Aligned_cols=91 Identities=23% Similarity=0.503 Sum_probs=75.9
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
.+|++.+.||+|+||.||+|.+. .++.+|+|.+..... ....+.+|+++++++.||+|+++++.+. .....++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~ 76 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCT-----ERSPICL 76 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEc-----cCCceEE
Confidence 46888899999999999999885 467899998864332 2357899999999999999999998843 4678899
Q ss_pred eecccccCCchhhhhccc
Q 042887 128 IYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~~ 145 (628)
+|||+++++|.+++....
T Consensus 77 v~e~~~~~~L~~~~~~~~ 94 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQR 94 (256)
T ss_pred EEEcCCCCcHHHHHHhCc
Confidence 999999999999886544
No 318
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=98.77 E-value=9.8e-09 Score=102.20 Aligned_cols=94 Identities=28% Similarity=0.486 Sum_probs=78.3
Q ss_pred hCCCCcCceeecCCceeEEEEEECC-----CCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGE-----TGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKG 121 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 121 (628)
..+|.+.+.||+|+||.||+|++.. ++..+|+|.+........+.+.+|++++++++||||+++++.+. .
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~ 78 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCG-----D 78 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEc-----c
Confidence 3468888999999999999998642 44568999887655555577899999999999999999999854 4
Q ss_pred cceeeeeecccccCCchhhhhccc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
....++||||++++++.+++....
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~ 102 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHG 102 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcC
Confidence 678899999999999999997644
No 319
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.77 E-value=9.5e-09 Score=103.51 Aligned_cols=97 Identities=22% Similarity=0.401 Sum_probs=77.8
Q ss_pred HHHhCCCCcCceeecCCceeEEEEEECC-------CCcEEEEEEeeccc-cchhhhHHHHHHHHhhc-CCCCccccccee
Q 042887 44 SKATNNFSASNMIGQGSFGFVYKGKLGE-------TGTTVAVKVMNLKQ-KGAAKSFVTECEALSNV-RHRNLIKIITVC 114 (628)
Q Consensus 44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~-------~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~ 114 (628)
....++|.+.+.||+|+||.||+|++.. ....+|+|.+.... ......+.+|+.+++++ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 3445678899999999999999998632 34569999987532 33456788999999999 599999999986
Q ss_pred eeccccccceeeeeecccccCCchhhhhccc
Q 042887 115 SSIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 115 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
. .....|++|||+++|+|.+++....
T Consensus 88 ~-----~~~~~~lv~e~~~~g~L~~~i~~~~ 113 (314)
T cd05099 88 T-----QEGPLYVIVEYAAKGNLREFLRARR 113 (314)
T ss_pred c-----cCCceEEEEecCCCCcHHHHHHhcC
Confidence 4 3667899999999999999997643
No 320
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.76 E-value=1.8e-08 Score=102.92 Aligned_cols=97 Identities=18% Similarity=0.244 Sum_probs=76.7
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecc-ccc
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSID-FKG 121 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~ 121 (628)
...++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.... ...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 34578999999999999999999999999999999986532 233456789999999999999999998864311 122
Q ss_pred cceeeeeecccccCCchhhhh
Q 042887 122 VDFKALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~ 142 (628)
....|+++|++ ++++.+++.
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~ 111 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVK 111 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHh
Confidence 34578999987 678877764
No 321
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=98.76 E-value=2.7e-09 Score=107.09 Aligned_cols=86 Identities=26% Similarity=0.423 Sum_probs=71.6
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
+...-.+-+|.|+-|-||.|+. .++.||||.++.-.+ .+|.-|++++||||+.+.++|+. ...+++
T Consensus 124 e~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~elkE-------TdIKHLRkLkH~NII~FkGVCtq-----sPcyCI 189 (904)
T KOG4721|consen 124 EEISELEWLGSGAQGAVFLGRL--HNETVAVKKVRELKE-------TDIKHLRKLKHPNIITFKGVCTQ-----SPCYCI 189 (904)
T ss_pred HHhhhhhhhccCcccceeeeec--cCceehhHHHhhhhh-------hhHHHHHhccCcceeeEeeeecC-----CceeEE
Confidence 3334456799999999999999 678999998864332 46777999999999999999975 688999
Q ss_pred eecccccCCchhhhhccccc
Q 042887 128 IYEYMKCGSSEDWMHQSNDK 147 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~~~~ 147 (628)
|||||+.|-|.+.++..+.-
T Consensus 190 iMEfCa~GqL~~VLka~~~i 209 (904)
T KOG4721|consen 190 IMEFCAQGQLYEVLKAGRPI 209 (904)
T ss_pred eeeccccccHHHHHhccCcc
Confidence 99999999999999876643
No 322
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=98.76 E-value=1.7e-08 Score=98.54 Aligned_cols=85 Identities=24% Similarity=0.465 Sum_probs=69.2
Q ss_pred eeecCCceeEEEEEEC--CCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeecc
Q 042887 55 MIGQGSFGFVYKGKLG--ETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEY 131 (628)
Q Consensus 55 ~iG~G~~g~V~~~~~~--~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~ 131 (628)
.||+|+||.||+|.+. .++..||+|+..... ....+.+.+|+.++++++||||+++++++. ....++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~------~~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE------AEALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc------CCCeEEEEEe
Confidence 3899999999999875 345679999986543 334467899999999999999999998753 3567999999
Q ss_pred cccCCchhhhhccc
Q 042887 132 MKCGSSEDWMHQSN 145 (628)
Q Consensus 132 ~~~g~L~~~l~~~~ 145 (628)
+++|+|.+++....
T Consensus 76 ~~~~~L~~~l~~~~ 89 (257)
T cd05115 76 ASGGPLNKFLSGKK 89 (257)
T ss_pred CCCCCHHHHHHhCC
Confidence 99999999886543
No 323
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=98.76 E-value=1.7e-08 Score=99.94 Aligned_cols=90 Identities=18% Similarity=0.236 Sum_probs=71.9
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHH-HhhcCCCCcccccceeeecccccccee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEA-LSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
++|++.+.||+|+||.||+|++..+|+.||+|.++... .....++..|+.. ++...||||+++++.+. .....
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~-----~~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF-----REGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe-----cCCcE
Confidence 46888999999999999999999999999999987542 2233456667665 56668999999999854 36789
Q ss_pred eeeecccccCCchhhhhc
Q 042887 126 ALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~ 143 (628)
|++|||++ |++.+++..
T Consensus 76 ~lv~e~~~-~~l~~~l~~ 92 (283)
T cd06617 76 WICMEVMD-TSLDKFYKK 92 (283)
T ss_pred EEEhhhhc-ccHHHHHHH
Confidence 99999997 577777654
No 324
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=98.76 E-value=1.7e-08 Score=99.23 Aligned_cols=87 Identities=21% Similarity=0.370 Sum_probs=69.3
Q ss_pred ceeecCCceeEEEEEECC--CCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeec
Q 042887 54 NMIGQGSFGFVYKGKLGE--TGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYE 130 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~--~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 130 (628)
+.||+|+||.||+|.... ....+|+|.+.... ......+.+|+.+++.++||||+++++.+. .....++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~-----~~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCI-----ESIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEEC-----CCCceEEEEE
Confidence 359999999999997533 33468888775432 233456889999999999999999999854 3677899999
Q ss_pred ccccCCchhhhhccc
Q 042887 131 YMKCGSSEDWMHQSN 145 (628)
Q Consensus 131 ~~~~g~L~~~l~~~~ 145 (628)
|+++|+|.+++....
T Consensus 76 ~~~~g~L~~~l~~~~ 90 (269)
T cd05042 76 FCPLGDLKNYLRSNR 90 (269)
T ss_pred eCCCCcHHHHHHhcc
Confidence 999999999997654
No 325
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=98.76 E-value=1.8e-08 Score=98.07 Aligned_cols=90 Identities=24% Similarity=0.345 Sum_probs=77.9
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|++.+.||+|+||.||++.+..+++.+|+|.+.... ......+.+|++++++++|+||+++++.+. .....+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFL-----DGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhc-----cCCEEE
Confidence 4788899999999999999999999999999987542 334567789999999999999999998843 468899
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
+|+||++++++.+++.+
T Consensus 76 ~v~e~~~~~~L~~~~~~ 92 (256)
T cd08530 76 IVMEYAPFGDLSKAISK 92 (256)
T ss_pred EEehhcCCCCHHHHHHH
Confidence 99999999999999865
No 326
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=98.76 E-value=1.5e-08 Score=100.10 Aligned_cols=93 Identities=22% Similarity=0.388 Sum_probs=73.6
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcE----EEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTT----VAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~----~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
++|++.+.||+|+||.||+|.+..+++. +|+|.+.... ......+..|+.+++++.||||+++++++. .
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~------~ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP------G 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC------C
Confidence 5688889999999999999999777764 6777764332 223456778888899999999999999853 3
Q ss_pred ceeeeeecccccCCchhhhhcccc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQSND 146 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~ 146 (628)
...++++||+++|++.+++.....
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~ 104 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRD 104 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhccc
Confidence 457899999999999999976443
No 327
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.76 E-value=1.8e-08 Score=99.92 Aligned_cols=91 Identities=29% Similarity=0.433 Sum_probs=73.8
Q ss_pred CCcCceeecCCceeEEEEEE----CCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 50 FSASNMIGQGSFGFVYKGKL----GETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~----~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
|+..+.||+|+||.||++.+ ..+++.||+|.+.... ....+.+.+|++++++++||||+++++++.. .....
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE---QGGKG 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCCce
Confidence 37889999999999987653 3467889999987543 2345678899999999999999999988653 23456
Q ss_pred eeeeecccccCCchhhhhc
Q 042887 125 KALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~ 143 (628)
.+++|||+++|++.+++..
T Consensus 83 ~~lv~e~~~~~~l~~~~~~ 101 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPK 101 (283)
T ss_pred EEEEecCCCCCCHHHHHHH
Confidence 8999999999999998864
No 328
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=98.75 E-value=1.4e-08 Score=100.79 Aligned_cols=90 Identities=23% Similarity=0.399 Sum_probs=76.1
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
++|++.+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|+++++.++|+||+++++.+.. .+..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-----KGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-----CCEE
Confidence 36889999999999999999999899999999886532 3345678999999999999999999999643 6789
Q ss_pred eeeecccccCCchhhhh
Q 042887 126 ALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~ 142 (628)
+++|||++++.+..+..
T Consensus 76 ~iv~e~~~~~~l~~~~~ 92 (288)
T cd07833 76 YLVFEYVERTLLELLEA 92 (288)
T ss_pred EEEEecCCCCHHHHHHh
Confidence 99999999877665543
No 329
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=98.75 E-value=1.9e-08 Score=103.26 Aligned_cols=97 Identities=20% Similarity=0.255 Sum_probs=77.1
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeec-cccc
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSI-DFKG 121 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-~~~~ 121 (628)
...++|++.+.||+|+||.||+|.+..+++.||+|.+... .......+.+|+.+++.++||||+++++++... .+..
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3467899999999999999999999889999999998753 233456788999999999999999999986531 1233
Q ss_pred cceeeeeecccccCCchhhhh
Q 042887 122 VDFKALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~ 142 (628)
....|+||||+++ ++.+.+.
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~ 113 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ 113 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh
Confidence 4568999999975 5555553
No 330
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=98.75 E-value=2.1e-08 Score=100.64 Aligned_cols=92 Identities=28% Similarity=0.363 Sum_probs=75.8
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
+.+.|+..+.||+|+||.||+|....+|+.||+|.+.... ....+.+.+|+++++.++||||+++++++.+ .
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-----~ 87 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-----E 87 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-----C
Confidence 3456889999999999999999998899999999986432 2334568899999999999999999999654 6
Q ss_pred ceeeeeecccccCCchhhhhc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~ 143 (628)
...|+|+||+. |++.+++..
T Consensus 88 ~~~~lv~e~~~-g~l~~~~~~ 107 (307)
T cd06607 88 HTAWLVMEYCL-GSASDILEV 107 (307)
T ss_pred CeEEEEHHhhC-CCHHHHHHH
Confidence 77899999997 566666543
No 331
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=98.74 E-value=2.6e-08 Score=97.01 Aligned_cols=91 Identities=22% Similarity=0.358 Sum_probs=79.0
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc--chhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK--GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|++.+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+++++.++|||++++.+.+. .....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~-----~~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE-----EKGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe-----cCCEEE
Confidence 47888999999999999999988899999999976432 45567889999999999999999998854 358899
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
+++||++++++.+++...
T Consensus 76 lv~e~~~~~~L~~~l~~~ 93 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQ 93 (258)
T ss_pred EEEEecCCCcHHHHHHHh
Confidence 999999999999988764
No 332
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.74 E-value=2.8e-08 Score=99.09 Aligned_cols=96 Identities=23% Similarity=0.419 Sum_probs=76.2
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcC-CCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~~ 124 (628)
++|++.+.||+|+||.||+|.+..+|+.||+|...... ......+.+|+.+++.+. ||||+++++.+...+......
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46889999999999999999999999999999986542 223467889999999995 699999998865422222334
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.|++|||+++ ++.+++...
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~ 99 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSN 99 (295)
T ss_pred EEEEeeccCc-CHHHHHHHh
Confidence 8999999985 788887643
No 333
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=98.74 E-value=2.8e-08 Score=96.61 Aligned_cols=91 Identities=36% Similarity=0.553 Sum_probs=79.0
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc--chhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK--GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|++.+.||+|+||.||+|....+++.||+|.+..... ...+.+.+|++++.+++|||++++++.+. .....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-----TSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-----eCCEEE
Confidence 47888999999999999999988999999999976543 45577999999999999999999998854 367889
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
++|||++++++.+++...
T Consensus 76 ~v~e~~~~~~L~~~~~~~ 93 (254)
T cd06627 76 IILEYAENGSLRQIIKKF 93 (254)
T ss_pred EEEecCCCCcHHHHHHhc
Confidence 999999999999988654
No 334
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.74 E-value=1.6e-08 Score=98.65 Aligned_cols=91 Identities=29% Similarity=0.493 Sum_probs=76.1
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
..+|++.+.||+|+||.||+|.. .|+.||+|..+... ..+.+.+|+.++++++|++++++++++. ......+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~ 76 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLY 76 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEE----cCCCceE
Confidence 45789999999999999999988 57889999886432 3467899999999999999999998753 3456789
Q ss_pred eeecccccCCchhhhhccc
Q 042887 127 LIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~~ 145 (628)
++|||+++|++.+++....
T Consensus 77 lv~e~~~~~~L~~~~~~~~ 95 (256)
T cd05082 77 IVTEYMAKGSLVDYLRSRG 95 (256)
T ss_pred EEEECCCCCcHHHHHHhcC
Confidence 9999999999999987543
No 335
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=98.74 E-value=1.7e-08 Score=100.40 Aligned_cols=86 Identities=23% Similarity=0.354 Sum_probs=74.4
Q ss_pred CceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeeccc
Q 042887 53 SNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYM 132 (628)
Q Consensus 53 ~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 132 (628)
...||+|+||.||+|....+|+.||+|.+..........+.+|+.+++.++|+||+++++.+. .....+++|||+
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~~ 99 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWVVMEFL 99 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEE-----eCCEEEEEEecC
Confidence 367999999999999999899999999986554445567899999999999999999999854 477899999999
Q ss_pred ccCCchhhhhc
Q 042887 133 KCGSSEDWMHQ 143 (628)
Q Consensus 133 ~~g~L~~~l~~ 143 (628)
+++++.+++..
T Consensus 100 ~~~~L~~~~~~ 110 (292)
T cd06657 100 EGGALTDIVTH 110 (292)
T ss_pred CCCcHHHHHhc
Confidence 99999887743
No 336
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.74 E-value=2.4e-08 Score=102.83 Aligned_cols=96 Identities=19% Similarity=0.243 Sum_probs=77.0
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeec-ccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSI-DFKGV 122 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-~~~~~ 122 (628)
..++|++.+.||+|+||.||+|.+..+++.||||.+... .......+.+|+.+++.++||||+++++++... .+...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 457899999999999999999999999999999998653 233456788999999999999999999876531 12334
Q ss_pred ceeeeeecccccCCchhhhh
Q 042887 123 DFKALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~ 142 (628)
...|+||||+++ ++.+++.
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~ 120 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ 120 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH
Confidence 568999999975 5665553
No 337
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=98.73 E-value=3.4e-08 Score=96.23 Aligned_cols=94 Identities=23% Similarity=0.402 Sum_probs=79.2
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc--chhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK--GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|+..+.||+|+||.||+|....+++.|++|.+..... ...+.+.+|++++++++||||+++++.+.+ ......+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERD---EEKNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEec---CCCCeEE
Confidence 47778999999999999999988999999999876542 446778999999999999999999988643 1127889
Q ss_pred eeecccccCCchhhhhccc
Q 042887 127 LIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~~ 145 (628)
+++||++++++.+++....
T Consensus 78 lv~e~~~~~~L~~~~~~~~ 96 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKFG 96 (260)
T ss_pred EEEEecCCCcHHHHHHHcC
Confidence 9999999999999986543
No 338
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=98.73 E-value=2.4e-08 Score=97.01 Aligned_cols=86 Identities=33% Similarity=0.497 Sum_probs=73.0
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccccc-hhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeeccc
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG-AAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYM 132 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 132 (628)
+.||+|+||.||+|.+.. ++.||+|.+...... ..+.+.+|++++++++|+||+++++.+. .....++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV-----QKQPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-----cCCCeEEEEEcC
Confidence 469999999999999976 899999998765332 4567899999999999999999998854 467889999999
Q ss_pred ccCCchhhhhccc
Q 042887 133 KCGSSEDWMHQSN 145 (628)
Q Consensus 133 ~~g~L~~~l~~~~ 145 (628)
+++++.+++.+..
T Consensus 75 ~~~~l~~~l~~~~ 87 (251)
T cd05041 75 PGGSLLTFLRKKK 87 (251)
T ss_pred CCCcHHHHHHhcC
Confidence 9999999986544
No 339
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=98.73 E-value=2.2e-08 Score=98.99 Aligned_cols=94 Identities=24% Similarity=0.461 Sum_probs=76.5
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCc----EEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGT----TVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKG 121 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~----~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 121 (628)
..+|++.+.||+|+||.||+|.+..+|+ .||+|.+.... ....+.+.+|+.+++.+.||||+++++.+.
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~------ 79 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICL------ 79 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEc------
Confidence 3568888999999999999999877776 48999886542 334567889999999999999999998864
Q ss_pred cceeeeeecccccCCchhhhhcccc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQSND 146 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~ 146 (628)
....++++||+++|++.+++....+
T Consensus 80 ~~~~~l~~~~~~~g~l~~~l~~~~~ 104 (279)
T cd05109 80 TSTVQLVTQLMPYGCLLDYVRENKD 104 (279)
T ss_pred CCCcEEEEEcCCCCCHHHHHhhccC
Confidence 3456799999999999999876443
No 340
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=98.73 E-value=3.3e-08 Score=99.38 Aligned_cols=95 Identities=27% Similarity=0.468 Sum_probs=76.5
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
..++|++.+.||+|+||.||+|.+..+|+.||+|.++... ......+.+|+.++++++|+||+++++++.. ....
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~ 81 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVG---KHLD 81 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEec---CCCC
Confidence 3568999999999999999999999999999999987543 2223456789999999999999999988643 2235
Q ss_pred eeeeeecccccCCchhhhhcc
Q 042887 124 FKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~ 144 (628)
..++||||+.+ ++.+++...
T Consensus 82 ~~~lv~e~~~~-~l~~~l~~~ 101 (309)
T cd07845 82 SIFLVMEYCEQ-DLASLLDNM 101 (309)
T ss_pred eEEEEEecCCC-CHHHHHHhc
Confidence 68999999974 777777643
No 341
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=98.73 E-value=2.1e-08 Score=99.14 Aligned_cols=95 Identities=22% Similarity=0.420 Sum_probs=78.2
Q ss_pred HhCCCCcCceeecCCceeEEEEEECC----CCcEEEEEEeecc-ccchhhhHHHHHHHHhhcCCCCcccccceeeecccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGE----TGTTVAVKVMNLK-QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFK 120 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~----~~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 120 (628)
..++|++.+.||+|+||.||+|.+.. +++.||+|.+... .....+.+.+|+.++++++||||+++++++..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~---- 79 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIE---- 79 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 35679999999999999999999865 2578999988643 23345678899999999999999999998642
Q ss_pred ccceeeeeecccccCCchhhhhcc
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
.....++++||+++|++.+++...
T Consensus 80 ~~~~~~~~~~~~~~~~L~~~l~~~ 103 (280)
T cd05043 80 DGEPPFVLYPYMNWGNLKLFLQQC 103 (280)
T ss_pred CCCCCEEEEEcCCCCcHHHHHHhc
Confidence 356788999999999999998654
No 342
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=98.72 E-value=2.7e-08 Score=99.22 Aligned_cols=90 Identities=26% Similarity=0.496 Sum_probs=75.8
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
++|++.+.||+|+||.||+|.+..+|+.||+|.+.... ....+.+.+|++++++++||||+++++++. .....
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH-----SEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe-----cCCeE
Confidence 57899999999999999999998899999999986542 233456889999999999999999999854 46789
Q ss_pred eeeecccccCCchhhhhc
Q 042887 126 ALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~ 143 (628)
|+||||++ +++.+++..
T Consensus 77 ~lv~e~~~-~~l~~~~~~ 93 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDS 93 (294)
T ss_pred EEEEeccc-ccHHHHHHh
Confidence 99999996 577777654
No 343
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=98.72 E-value=3.8e-08 Score=98.53 Aligned_cols=98 Identities=26% Similarity=0.467 Sum_probs=77.3
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecc----
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSID---- 118 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---- 118 (628)
...++|++.+.+|+|+||.||+|.+..+|+.||+|.++... ......+.+|+++++.++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35678999999999999999999999899999999997542 233456788999999999999999998865411
Q ss_pred -ccccceeeeeecccccCCchhhhhc
Q 042887 119 -FKGVDFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 119 -~~~~~~~~lv~e~~~~g~L~~~l~~ 143 (628)
.+.....++++||+++ ++...+..
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~ 108 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLES 108 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhc
Confidence 1123478999999986 66665543
No 344
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.72 E-value=2.8e-08 Score=101.12 Aligned_cols=97 Identities=24% Similarity=0.352 Sum_probs=77.7
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
..+|.+.+.||+|+||.||+|++..+++.||+|.+... .......+.+|+.+++.++|+||+++++++..........
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 35799999999999999999999999999999998653 2334456788999999999999999999865422223346
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.|+++||+. +++.+++...
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~ 102 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS 102 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC
Confidence 899999996 6788777543
No 345
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.72 E-value=4.8e-08 Score=100.21 Aligned_cols=89 Identities=16% Similarity=0.209 Sum_probs=73.8
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
....+|++.+.||+|+||.||+|.+..+++.||+|+... .....|+.++++++||||+++++++.. ...
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~ 131 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLVS-----GAI 131 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEEe-----CCe
Confidence 345679999999999999999999998899999997533 234579999999999999999998653 678
Q ss_pred eeeeecccccCCchhhhhccc
Q 042887 125 KALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.++||||+. |++.+++....
T Consensus 132 ~~lv~e~~~-~~l~~~l~~~~ 151 (357)
T PHA03209 132 TCMVLPHYS-SDLYTYLTKRS 151 (357)
T ss_pred eEEEEEccC-CcHHHHHHhcc
Confidence 899999996 58888876544
No 346
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.72 E-value=3.4e-08 Score=100.74 Aligned_cols=97 Identities=21% Similarity=0.269 Sum_probs=76.5
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecc-cccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSID-FKGV 122 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~~ 122 (628)
..++|++.+.||+|+||.||+|.+..+|+.||+|.+.... ....+.+.+|+.++++++||||+++++++.... ....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 3567999999999999999999999999999999986432 223456889999999999999999998865311 1122
Q ss_pred ceeeeeecccccCCchhhhhc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~ 143 (628)
..+++||||+ ++++.+++..
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~ 112 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH 112 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc
Confidence 4568999998 6788877753
No 347
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=98.72 E-value=3.1e-08 Score=96.61 Aligned_cols=86 Identities=24% Similarity=0.446 Sum_probs=70.7
Q ss_pred ceeecCCceeEEEEEECCCC---cEEEEEEeecccc-chhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETG---TTVAVKVMNLKQK-GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~---~~~avK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|.+...+ ..+|+|.+..... ...+.+.+|+.+++.++||||+++++.+. ....+++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK------GEPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc------CCceEEEE
Confidence 46999999999999876554 7899999875432 34567899999999999999999998743 34679999
Q ss_pred cccccCCchhhhhccc
Q 042887 130 EYMKCGSSEDWMHQSN 145 (628)
Q Consensus 130 e~~~~g~L~~~l~~~~ 145 (628)
||+++|++.+++....
T Consensus 75 e~~~~~~L~~~l~~~~ 90 (257)
T cd05060 75 ELAPLGPLLKYLKKRR 90 (257)
T ss_pred EeCCCCcHHHHHHhCC
Confidence 9999999999987544
No 348
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=98.71 E-value=2.3e-08 Score=97.77 Aligned_cols=87 Identities=20% Similarity=0.424 Sum_probs=69.6
Q ss_pred ceeecCCceeEEEEEECCC------------CcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccc
Q 042887 54 NMIGQGSFGFVYKGKLGET------------GTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKG 121 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~------------~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 121 (628)
+.||+|+||.||+|..... ...+|+|.+..........+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~----- 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVR----- 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec-----
Confidence 3689999999999985321 23588888766555555678899999999999999999998653
Q ss_pred cceeeeeecccccCCchhhhhccc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
....+++|||+++|++..++....
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~ 99 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKS 99 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcC
Confidence 567799999999999988876544
No 349
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=98.71 E-value=2.7e-08 Score=97.06 Aligned_cols=86 Identities=27% Similarity=0.439 Sum_probs=71.9
Q ss_pred ceeecCCceeEEEEEECC-CCc--EEEEEEeecccc-chhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGE-TGT--TVAVKVMNLKQK-GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~-~~~--~~avK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|.+.. .++ .||+|.+..... ...+.+.+|+..+++++||||+++++.+. . ...+++|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~-~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVL-----T-HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEc-----C-CeEEEEE
Confidence 468999999999999865 333 699999976554 56678999999999999999999998843 3 7889999
Q ss_pred cccccCCchhhhhccc
Q 042887 130 EYMKCGSSEDWMHQSN 145 (628)
Q Consensus 130 e~~~~g~L~~~l~~~~ 145 (628)
||+++|++.+++.+..
T Consensus 75 e~~~~~~L~~~l~~~~ 90 (257)
T cd05040 75 ELAPLGSLLDRLRKDA 90 (257)
T ss_pred EecCCCcHHHHHHhcc
Confidence 9999999999987644
No 350
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=98.71 E-value=2.9e-08 Score=100.75 Aligned_cols=84 Identities=23% Similarity=0.284 Sum_probs=67.8
Q ss_pred eecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhc---CCCCcccccceeeeccccccceeeeee
Q 042887 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNV---RHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 56 iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
||+|+||.||+|++..+++.||+|++.... ......+.+|..++... .||+|+++++.+ +.....|+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~-----~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF-----QTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE-----ecCCeEEEEE
Confidence 699999999999999999999999996532 22334456677777665 699999999884 4578899999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
||+++|++.+++.+.
T Consensus 76 e~~~~g~L~~~l~~~ 90 (330)
T cd05586 76 DYMSGGELFWHLQKE 90 (330)
T ss_pred cCCCCChHHHHHHhc
Confidence 999999999888643
No 351
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.71 E-value=3.4e-08 Score=98.20 Aligned_cols=91 Identities=21% Similarity=0.315 Sum_probs=75.3
Q ss_pred CCCcCceeecCCceeEEEEEEC---CCCcEEEEEEeeccc----cchhhhHHHHHHHHhhc-CCCCcccccceeeecccc
Q 042887 49 NFSASNMIGQGSFGFVYKGKLG---ETGTTVAVKVMNLKQ----KGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFK 120 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~---~~~~~~avK~~~~~~----~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 120 (628)
+|++.+.||+|+||.||.|+.. .+|+.||+|++.... ....+.+.+|+.++.++ +|++|+.+++.+ +
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence 4788899999999999999874 478999999987532 23346688899999999 599999998884 4
Q ss_pred ccceeeeeecccccCCchhhhhcc
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
.....|+||||++++++.+++...
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~ 99 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQR 99 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHc
Confidence 467889999999999999988653
No 352
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.71 E-value=3.1e-08 Score=101.04 Aligned_cols=95 Identities=20% Similarity=0.329 Sum_probs=77.4
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeecc--------
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSID-------- 118 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-------- 118 (628)
..+|++.+.||.|+||.||+|....+|+.||+|.+........+.+.+|+++++.++||||+++++++....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 367999999999999999999999999999999997665555677889999999999999999988754311
Q ss_pred -ccccceeeeeecccccCCchhhhh
Q 042887 119 -FKGVDFKALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 119 -~~~~~~~~lv~e~~~~g~L~~~l~ 142 (628)
+......+++|||++ +++.+++.
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~ 107 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLE 107 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHH
Confidence 112246789999997 58877764
No 353
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.71 E-value=4.4e-08 Score=97.06 Aligned_cols=90 Identities=26% Similarity=0.517 Sum_probs=75.8
Q ss_pred CCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
|++.+.||+|++|.||+|.+..+|+.||+|++.... ....+.+.+|++++++++|||++++++++. +....|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-----~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH-----SENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec-----cCCeEEE
Confidence 677889999999999999999899999999987543 233467889999999999999999999854 4688999
Q ss_pred eecccccCCchhhhhccc
Q 042887 128 IYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~~ 145 (628)
+|||++ +++.+++....
T Consensus 76 v~e~~~-~~l~~~~~~~~ 92 (283)
T cd07835 76 VFEFLD-LDLKKYMDSSP 92 (283)
T ss_pred EEeccC-cCHHHHHhhCC
Confidence 999995 68888876543
No 354
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=98.71 E-value=3e-08 Score=97.54 Aligned_cols=87 Identities=30% Similarity=0.553 Sum_probs=71.5
Q ss_pred ceeecCCceeEEEEEECCCCc--EEEEEEeecc-ccchhhhHHHHHHHHhhc-CCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETGT--TVAVKVMNLK-QKGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~--~~avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|+...++. .+|+|..... .....+.+.+|++++.++ +||||+++++.+. .....+++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-----~~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HRGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEe-----cCCCceEEE
Confidence 368999999999999987775 4688887643 234456788999999999 7999999999864 366789999
Q ss_pred cccccCCchhhhhccc
Q 042887 130 EYMKCGSSEDWMHQSN 145 (628)
Q Consensus 130 e~~~~g~L~~~l~~~~ 145 (628)
||+++|+|.+++....
T Consensus 76 e~~~~~~L~~~i~~~~ 91 (270)
T cd05047 76 EYAPHGNLLDFLRKSR 91 (270)
T ss_pred EeCCCCcHHHHHHhcc
Confidence 9999999999987543
No 355
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=98.70 E-value=1.9e-08 Score=98.30 Aligned_cols=90 Identities=27% Similarity=0.460 Sum_probs=73.8
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
.++|++.+.||+|+||.||+|.+..+ ..+|+|.+.... ...+.+.+|+.+++.++|||++++++.+. ....+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~ 76 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS------EEPIY 76 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc------CCCcE
Confidence 45688999999999999999998544 569999876433 23467889999999999999999987742 35678
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
++|||+++|++.+++...
T Consensus 77 ~v~e~~~~~~L~~~~~~~ 94 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEG 94 (260)
T ss_pred EEEEcCCCCCHHHHHhhC
Confidence 999999999999998653
No 356
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=98.70 E-value=3.3e-08 Score=98.51 Aligned_cols=94 Identities=22% Similarity=0.445 Sum_probs=77.1
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
++|++.+.||+|+||.||+|.+..+++.+|+|.++... ......+.+|+.++++++||||+++++++.. ......
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~---~~~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVG---SNLDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEe---cCCCcE
Confidence 57899999999999999999999899999999997543 2233457889999999999999999998653 123789
Q ss_pred eeeecccccCCchhhhhccc
Q 042887 126 ALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~ 145 (628)
|+|+||+.+ ++.+++....
T Consensus 82 ~lv~e~~~~-~L~~~~~~~~ 100 (293)
T cd07843 82 YMVMEYVEH-DLKSLMETMK 100 (293)
T ss_pred EEEehhcCc-CHHHHHHhcc
Confidence 999999984 8888876544
No 357
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=98.70 E-value=3.6e-08 Score=96.47 Aligned_cols=84 Identities=21% Similarity=0.337 Sum_probs=72.6
Q ss_pred eecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeeccc
Q 042887 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYM 132 (628)
Q Consensus 56 iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 132 (628)
||.|+||.||+|++..+++.||+|.+.... ....+.+.+|+.+++.++||||+++++.+. .....++++||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK-----DKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE-----cCCccEEEEecC
Confidence 699999999999998889999999997542 234567899999999999999999999854 477899999999
Q ss_pred ccCCchhhhhcc
Q 042887 133 KCGSSEDWMHQS 144 (628)
Q Consensus 133 ~~g~L~~~l~~~ 144 (628)
++++|.+++.+.
T Consensus 76 ~~~~L~~~l~~~ 87 (262)
T cd05572 76 LGGELWTILRDR 87 (262)
T ss_pred CCCcHHHHHhhc
Confidence 999999998654
No 358
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=98.70 E-value=2.3e-08 Score=97.63 Aligned_cols=85 Identities=28% Similarity=0.585 Sum_probs=69.7
Q ss_pred ceeecCCceeEEEEEECCCC----------cEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 54 NMIGQGSFGFVYKGKLGETG----------TTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~----------~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
+.||+|+||.||+|.+..++ ..+++|........ ...+.+|+.++++++||||+++++.+. . .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~-~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCV-----R-D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEe-----c-C
Confidence 46899999999999997666 34777876544332 678899999999999999999999864 2 5
Q ss_pred eeeeeecccccCCchhhhhccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
..++||||+++|+|.+++....
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~ 95 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREK 95 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhc
Confidence 6789999999999999987654
No 359
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=98.70 E-value=3.6e-08 Score=96.24 Aligned_cols=86 Identities=34% Similarity=0.616 Sum_probs=74.1
Q ss_pred ceeecCCceeEEEEEECCC---CcEEEEEEeeccccc-hhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGET---GTTVAVKVMNLKQKG-AAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~---~~~~avK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|..... +..||+|.+...... ..+.+.+|++.++.++|+||+++++++. .....+++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCT-----EEEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeec-----CCCceEEEE
Confidence 4699999999999999765 889999999765432 3678899999999999999999999854 478899999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
||++++++.+++...
T Consensus 76 e~~~~~~L~~~l~~~ 90 (262)
T cd00192 76 EYMEGGDLLDYLRKS 90 (262)
T ss_pred EeccCCcHHHHHhhc
Confidence 999999999998765
No 360
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=98.70 E-value=3.3e-08 Score=96.80 Aligned_cols=84 Identities=24% Similarity=0.382 Sum_probs=72.4
Q ss_pred eecCCceeEEEEEECCCCcEEEEEEeecccc---chhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeeccc
Q 042887 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQK---GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYM 132 (628)
Q Consensus 56 iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 132 (628)
||+|+||.||+|++..+|+.+|+|.+..... ...+.+.+|++++++++||||+++++.+ ......|+++||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF-----QGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe-----ecCcEEEEEEecC
Confidence 6899999999999988899999999865432 3456788999999999999999999884 4578899999999
Q ss_pred ccCCchhhhhcc
Q 042887 133 KCGSSEDWMHQS 144 (628)
Q Consensus 133 ~~g~L~~~l~~~ 144 (628)
+++++.+++.+.
T Consensus 76 ~~~~L~~~l~~~ 87 (265)
T cd05579 76 PGGDLASLLENV 87 (265)
T ss_pred CCCcHHHHHHHc
Confidence 999999988654
No 361
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=98.70 E-value=4.8e-08 Score=94.71 Aligned_cols=91 Identities=30% Similarity=0.474 Sum_probs=79.8
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALI 128 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv 128 (628)
+|+..+.||+|+||.||+|.+..+++.+++|............+.+|++.++.++|++|+++++.+. .....+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL-----KKDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cCCeEEEE
Confidence 4788899999999999999998889999999997655445678999999999999999999999854 36788999
Q ss_pred ecccccCCchhhhhcc
Q 042887 129 YEYMKCGSSEDWMHQS 144 (628)
Q Consensus 129 ~e~~~~g~L~~~l~~~ 144 (628)
+||++++++.+++...
T Consensus 76 ~e~~~~~~L~~~~~~~ 91 (253)
T cd05122 76 MEFCSGGSLKDLLKST 91 (253)
T ss_pred EecCCCCcHHHHHhhc
Confidence 9999999999988664
No 362
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=98.69 E-value=3.1e-08 Score=99.19 Aligned_cols=93 Identities=28% Similarity=0.528 Sum_probs=74.7
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCc----EEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGT----TVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKG 121 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~----~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 121 (628)
.++|+..+.||+|+||.||+|.+..+|+ .||+|.+.... ......+.+|+.+++.++||||+++++.+..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~----- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS----- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-----
Confidence 3568888999999999999999877776 46888876543 2233468899999999999999999998642
Q ss_pred cceeeeeecccccCCchhhhhccc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
...++++||+++|++.+++....
T Consensus 81 -~~~~~v~e~~~~g~l~~~~~~~~ 103 (303)
T cd05110 81 -PTIQLVTQLMPHGCLLDYVHEHK 103 (303)
T ss_pred -CCceeeehhcCCCCHHHHHHhcc
Confidence 34678999999999999987654
No 363
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=98.69 E-value=4.9e-08 Score=96.85 Aligned_cols=91 Identities=26% Similarity=0.526 Sum_probs=75.8
Q ss_pred CCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
|++.+.||+|+||.||+|.+..+|+.+|+|.+.... ......+.+|+++++.++|||++++++++.. ...+..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTS---KGKGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEec---CCCCcEEE
Confidence 677889999999999999998889999999997653 3345678899999999999999999998654 11378999
Q ss_pred eecccccCCchhhhhcc
Q 042887 128 IYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~ 144 (628)
|+||+++ ++.+++...
T Consensus 78 v~e~~~~-~l~~~~~~~ 93 (287)
T cd07840 78 VFEYMDH-DLTGLLDSP 93 (287)
T ss_pred Eeccccc-cHHHHHhcc
Confidence 9999985 888877654
No 364
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.69 E-value=3.3e-08 Score=100.17 Aligned_cols=94 Identities=23% Similarity=0.312 Sum_probs=76.7
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeecccccc
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 122 (628)
...++|++.+.||+|+||.||+|.+..+++.||+|.+... .....+.+.+|+++++.++||||+++.+++.. ..
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~~ 82 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFIS----PL 82 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEec----CC
Confidence 3567899999999999999999999999999999988643 22345678899999999999999999988532 24
Q ss_pred ceeeeeecccccCCchhhhhc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~ 143 (628)
...++++||+ ++++.+++..
T Consensus 83 ~~~~lv~e~~-~~~L~~~~~~ 102 (328)
T cd07856 83 EDIYFVTELL-GTDLHRLLTS 102 (328)
T ss_pred CcEEEEeehh-ccCHHHHHhc
Confidence 5688999998 4678777653
No 365
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=98.69 E-value=4.9e-08 Score=100.10 Aligned_cols=97 Identities=22% Similarity=0.266 Sum_probs=77.6
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeee-ccccc
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSS-IDFKG 121 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~ 121 (628)
...++|+..+.||+|+||.||+|.+..+|+.||+|.+... .......+.+|+.+++.++||||+++++++.. ..+.+
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 3457899999999999999999999999999999998643 23344667899999999999999999988653 11233
Q ss_pred cceeeeeecccccCCchhhhh
Q 042887 122 VDFKALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~ 142 (628)
....|+||||+.+ ++.+.+.
T Consensus 93 ~~~~~lv~e~~~~-~l~~~~~ 112 (353)
T cd07850 93 FQDVYLVMELMDA-NLCQVIQ 112 (353)
T ss_pred cCcEEEEEeccCC-CHHHHHh
Confidence 4567999999974 7777664
No 366
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=98.69 E-value=4.8e-08 Score=96.87 Aligned_cols=90 Identities=23% Similarity=0.332 Sum_probs=76.8
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALI 128 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv 128 (628)
.|...+.||+|++|.||+|.+..+++.+|+|.+........+.+.+|+.+++.+.||||+++++.+. .....+++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-----~~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL-----VGDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEE-----cCCeEEEE
Confidence 3444578999999999999998899999999987654445567889999999999999999999843 46788999
Q ss_pred ecccccCCchhhhhc
Q 042887 129 YEYMKCGSSEDWMHQ 143 (628)
Q Consensus 129 ~e~~~~g~L~~~l~~ 143 (628)
+||++++++.+++..
T Consensus 95 ~e~~~~~~L~~~~~~ 109 (285)
T cd06648 95 MEFLEGGALTDIVTH 109 (285)
T ss_pred EeccCCCCHHHHHHh
Confidence 999999999998865
No 367
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=98.68 E-value=2.3e-08 Score=97.28 Aligned_cols=88 Identities=26% Similarity=0.521 Sum_probs=73.7
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
++|++.+.||+|+||.||+|.. +++.||+|..+... ..+.+.+|+.++++++||||+++++.+. ....++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~------~~~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVIL------HNGLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEc------CCCcEE
Confidence 5688999999999999999976 78889999986432 3457889999999999999999998854 234689
Q ss_pred eecccccCCchhhhhccc
Q 042887 128 IYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~~ 145 (628)
+|||+++|++.+++....
T Consensus 76 v~e~~~~~~L~~~l~~~~ 93 (254)
T cd05083 76 VMELMSKGNLVNFLRTRG 93 (254)
T ss_pred EEECCCCCCHHHHHHhcC
Confidence 999999999999986543
No 368
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.68 E-value=4.3e-08 Score=103.00 Aligned_cols=85 Identities=18% Similarity=0.219 Sum_probs=72.2
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
.+|.+.+.||+|+||.||+|.+..+++.||+|... ...+.+|++++++++|+|||++++++.. .+..++
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~-----~~~~~l 237 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVV-----GGLTCL 237 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEE-----CCEEEE
Confidence 46999999999999999999999999999999632 2346789999999999999999998653 678899
Q ss_pred eecccccCCchhhhhcc
Q 042887 128 IYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~ 144 (628)
+||++. +++.+++...
T Consensus 238 v~e~~~-~~L~~~l~~~ 253 (461)
T PHA03211 238 VLPKYR-SDLYTYLGAR 253 (461)
T ss_pred EEEccC-CCHHHHHHhc
Confidence 999995 6888887654
No 369
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=98.68 E-value=4.7e-08 Score=98.58 Aligned_cols=92 Identities=26% Similarity=0.333 Sum_probs=75.3
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
+.|+..+.||+|+||.||+|++..+++.||+|.+.... ......+.+|+++++.++|||++++++++.+ ...
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~ 99 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-----EHT 99 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-----CCe
Confidence 45788889999999999999998899999999987542 2234568899999999999999999998643 678
Q ss_pred eeeeecccccCCchhhhhccc
Q 042887 125 KALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.++||||+.+ ++.+.+....
T Consensus 100 ~~lv~e~~~g-~l~~~~~~~~ 119 (317)
T cd06635 100 AWLVMEYCLG-SASDLLEVHK 119 (317)
T ss_pred EEEEEeCCCC-CHHHHHHHhc
Confidence 8999999974 7777665433
No 370
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.68 E-value=4.9e-08 Score=98.43 Aligned_cols=90 Identities=22% Similarity=0.417 Sum_probs=74.2
Q ss_pred CCCcCceeecCCceeEEEEEECC--CCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGE--TGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~--~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
+|++.+.||+|+||.||+|.+.. +++.||+|.+.... ....+.+.+|+.++++++||||+++++.+.+ ....
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLE---HADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeC---CCCc
Confidence 47888999999999999999988 78999999997632 3445678899999999999999999998654 2237
Q ss_pred eeeeeecccccCCchhhhh
Q 042887 124 FKALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~ 142 (628)
..++||||+++ ++.+.+.
T Consensus 78 ~~~lv~e~~~~-~l~~~~~ 95 (316)
T cd07842 78 SVYLLFDYAEH-DLWQIIK 95 (316)
T ss_pred eEEEEEeCCCc-CHHHHHH
Confidence 89999999975 5666554
No 371
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.68 E-value=6e-08 Score=99.01 Aligned_cols=100 Identities=20% Similarity=0.265 Sum_probs=78.5
Q ss_pred HHHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeec-c
Q 042887 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSI-D 118 (628)
Q Consensus 42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-~ 118 (628)
+.....++|++.+.||+|+||.||+|.+..+|+.||+|.+.... ....+.+.+|+.++++++||||+++++++... .
T Consensus 11 ~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~ 90 (345)
T cd07877 11 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 90 (345)
T ss_pred HHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccc
Confidence 34456788999999999999999999998899999999987532 22346688999999999999999999886542 1
Q ss_pred ccccceeeeeecccccCCchhhhh
Q 042887 119 FKGVDFKALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~ 142 (628)
+......|++++++ ++++.+++.
T Consensus 91 ~~~~~~~~lv~~~~-~~~L~~~~~ 113 (345)
T cd07877 91 LEEFNDVYLVTHLM-GADLNNIVK 113 (345)
T ss_pred ccccccEEEEehhc-ccCHHHHHh
Confidence 22334578888876 678877664
No 372
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=98.68 E-value=4.1e-08 Score=95.73 Aligned_cols=84 Identities=21% Similarity=0.474 Sum_probs=68.9
Q ss_pred eeecCCceeEEEEEE--CCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeec
Q 042887 55 MIGQGSFGFVYKGKL--GETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYE 130 (628)
Q Consensus 55 ~iG~G~~g~V~~~~~--~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 130 (628)
.||+|+||.||+|.+ ..+++.+|+|+++... ....+.+.+|+.+++.++||||+++++.+. ....++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------~~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE------AESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc------CCCcEEEEe
Confidence 589999999999975 3567889999986543 234567899999999999999999998753 345689999
Q ss_pred ccccCCchhhhhcc
Q 042887 131 YMKCGSSEDWMHQS 144 (628)
Q Consensus 131 ~~~~g~L~~~l~~~ 144 (628)
|+++|++.+++...
T Consensus 76 ~~~~~~L~~~l~~~ 89 (257)
T cd05116 76 LAELGPLNKFLQKN 89 (257)
T ss_pred cCCCCcHHHHHHhc
Confidence 99999999988643
No 373
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.67 E-value=6.3e-08 Score=97.31 Aligned_cols=98 Identities=21% Similarity=0.396 Sum_probs=76.5
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecc---cc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSID---FK 120 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---~~ 120 (628)
..++|++.+.||+|+||.||+|....+++.||+|.+.... ......+.+|+.++++++||||+++++++.... ..
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 3467999999999999999999999999999999986532 222345678999999999999999999876421 11
Q ss_pred ccceeeeeecccccCCchhhhhcc
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
.....++||||+.+ ++.+++...
T Consensus 90 ~~~~~~lv~e~~~~-~l~~~l~~~ 112 (310)
T cd07865 90 YKGSFYLVFEFCEH-DLAGLLSNK 112 (310)
T ss_pred CCceEEEEEcCCCc-CHHHHHHhc
Confidence 23467999999974 777776543
No 374
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=98.67 E-value=3.9e-08 Score=99.70 Aligned_cols=86 Identities=26% Similarity=0.359 Sum_probs=72.0
Q ss_pred ceeecC--CceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQG--SFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G--~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
..||+| +||.||+|++..+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++. .....++++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~-----~~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFT-----TGSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEe-----cCCceEEEE
Confidence 356666 89999999999999999999987543 233467889999999999999999999954 477889999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
||+.+|++.+++.+.
T Consensus 79 e~~~~~~l~~~l~~~ 93 (328)
T cd08226 79 PFMAYGSANSLLKTY 93 (328)
T ss_pred ecccCCCHHHHHHhh
Confidence 999999999888654
No 375
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=98.67 E-value=5e-08 Score=95.82 Aligned_cols=90 Identities=18% Similarity=0.366 Sum_probs=73.0
Q ss_pred CCCcCceeecCCceeEEEEEECC-CCcEEEEEEeeccc----------cchhhhHHHHHHHHhh-cCCCCcccccceeee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGE-TGTTVAVKVMNLKQ----------KGAAKSFVTECEALSN-VRHRNLIKIITVCSS 116 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~-~~~~~avK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~ 116 (628)
+|++.+.||+|+||.||+|.+.. .++.+|+|.+.... .....++.+|+.++.+ ++||||+++++.+.
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~- 79 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL- 79 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc-
Confidence 47888999999999999999977 67889999885421 1233557788888765 68999999999854
Q ss_pred ccccccceeeeeecccccCCchhhhhc
Q 042887 117 IDFKGVDFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 117 ~~~~~~~~~~lv~e~~~~g~L~~~l~~ 143 (628)
..+..+++|||++++++.+++..
T Consensus 80 ----~~~~~~lv~e~~~~~~l~~~l~~ 102 (269)
T cd08528 80 ----ENDRLYIVMDLIEGAPLGEHFNS 102 (269)
T ss_pred ----cCCeEEEEEecCCCCcHHHHHHH
Confidence 47889999999999999888743
No 376
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.67 E-value=1.2e-08 Score=95.26 Aligned_cols=96 Identities=22% Similarity=0.314 Sum_probs=78.0
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCC----cEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETG----TTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFK 120 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~----~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 120 (628)
-..|+....||+|.||.||+|...+++ +.+|+|.++..+ .+.....+||+..+++++|||||.+..++.+
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~---- 98 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLS---- 98 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhc----
Confidence 357999999999999999999776554 368999987543 3556678999999999999999999998643
Q ss_pred ccceeeeeecccccCCchhhhhccccc
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQSNDK 147 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~ 147 (628)
.+...++++||.+. ||.+.|+-++..
T Consensus 99 ~d~~v~l~fdYAEh-DL~~II~fHr~~ 124 (438)
T KOG0666|consen 99 HDKKVWLLFDYAEH-DLWHIIKFHRAS 124 (438)
T ss_pred cCceEEEEehhhhh-hHHHHHHHhccc
Confidence 27889999999985 888888766543
No 377
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.66 E-value=7.3e-09 Score=100.03 Aligned_cols=100 Identities=20% Similarity=0.279 Sum_probs=82.5
Q ss_pred HHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhc-CCCCcccccceeeeccc
Q 042887 44 SKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDF 119 (628)
Q Consensus 44 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 119 (628)
.....+|....+||+|+||+|.+|..+.+.+.||||++++. ...+.+--+.|.++|+-- +-|.+++++.+ |
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHSc-----F 419 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSC-----F 419 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHH-----h
Confidence 44456799999999999999999999999999999999764 234445556777777755 47889999988 7
Q ss_pred cccceeeeeecccccCCchhhhhcccccc
Q 042887 120 KGVDFKALIYEYMKCGSSEDWMHQSNDKL 148 (628)
Q Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~ 148 (628)
++.++.|+||||+.||+|-.+|.+.++..
T Consensus 420 QTmDRLyFVMEyvnGGDLMyhiQQ~GkFK 448 (683)
T KOG0696|consen 420 QTMDRLYFVMEYVNGGDLMYHIQQVGKFK 448 (683)
T ss_pred hhhhheeeEEEEecCchhhhHHHHhcccC
Confidence 88999999999999999999988776544
No 378
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.66 E-value=4.9e-08 Score=95.47 Aligned_cols=88 Identities=25% Similarity=0.502 Sum_probs=70.1
Q ss_pred ceeecCCceeEEEEEECC---CCcEEEEEEeecc-ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGE---TGTTVAVKVMNLK-QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~---~~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|.+.. .+..||+|.+... .....+.+.+|+.+++.++||||+++++.+.. .....+++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLP----SEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeec----CCCCcEEEE
Confidence 468999999999998753 3457999988543 23445778899999999999999999987642 345678999
Q ss_pred cccccCCchhhhhccc
Q 042887 130 EYMKCGSSEDWMHQSN 145 (628)
Q Consensus 130 e~~~~g~L~~~l~~~~ 145 (628)
||+.+|++.+++....
T Consensus 77 e~~~~~~L~~~~~~~~ 92 (262)
T cd05058 77 PYMKHGDLRNFIRSET 92 (262)
T ss_pred ecCCCCCHHHHHHhcC
Confidence 9999999999986543
No 379
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=98.66 E-value=4.9e-08 Score=95.84 Aligned_cols=85 Identities=21% Similarity=0.395 Sum_probs=67.6
Q ss_pred eeecCCceeEEEEEECCCC--cEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeecc
Q 042887 55 MIGQGSFGFVYKGKLGETG--TTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEY 131 (628)
Q Consensus 55 ~iG~G~~g~V~~~~~~~~~--~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~ 131 (628)
.||+|+||.||+|+...++ ..+++|...... ....+.+.+|+.+++.++||||+++++.+.+ ....++||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-----~~~~~lv~e~ 76 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-----AIPYLLVFEY 76 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC-----CCccEEEEec
Confidence 5999999999999864332 345666665432 2345689999999999999999999998653 6678999999
Q ss_pred cccCCchhhhhcc
Q 042887 132 MKCGSSEDWMHQS 144 (628)
Q Consensus 132 ~~~g~L~~~l~~~ 144 (628)
+++|+|.+++.+.
T Consensus 77 ~~~~~L~~~l~~~ 89 (268)
T cd05086 77 CELGDLKSYLSQE 89 (268)
T ss_pred CCCCcHHHHHHhh
Confidence 9999999998754
No 380
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.66 E-value=5.3e-08 Score=99.10 Aligned_cols=91 Identities=20% Similarity=0.366 Sum_probs=73.3
Q ss_pred hCCCCc-CceeecCCceeEEEEEECCCCcEEEEEEeeccccch--------------hhhHHHHHHHHhhcCCCCccccc
Q 042887 47 TNNFSA-SNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGA--------------AKSFVTECEALSNVRHRNLIKII 111 (628)
Q Consensus 47 ~~~~~~-~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~nIv~l~ 111 (628)
.++|.. .+.||+|+||.||+|.+..+++.||+|.+....... ...+.+|+++++.++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 355654 577999999999999998899999999986532111 12578999999999999999999
Q ss_pred ceeeeccccccceeeeeecccccCCchhhhhc
Q 042887 112 TVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 112 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 143 (628)
+++. .....+++|||+. |++.+++..
T Consensus 87 ~~~~-----~~~~~~lv~e~~~-~~l~~~l~~ 112 (335)
T PTZ00024 87 DVYV-----EGDFINLVMDIMA-SDLKKVVDR 112 (335)
T ss_pred EEEe-----cCCcEEEEEeccc-cCHHHHHHh
Confidence 9854 4678999999997 588888754
No 381
>PRK10345 hypothetical protein; Provisional
Probab=98.66 E-value=5.9e-08 Score=90.04 Aligned_cols=89 Identities=13% Similarity=0.233 Sum_probs=67.7
Q ss_pred CcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhc-----CCCCcccccceeeeccccccce-
Q 042887 51 SASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV-----RHRNLIKIITVCSSIDFKGVDF- 124 (628)
Q Consensus 51 ~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-----~h~nIv~l~~~~~~~~~~~~~~- 124 (628)
.-.+.||+|+||.||. ++.++.. +||++........+.+.+|+.+++.+ .||||+++++++... .....
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~--~g~g~v 79 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD--CGTGYV 79 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC--CCCeEE
Confidence 3457899999999995 7777665 69988765444557799999999999 579999999985431 11124
Q ss_pred eeeeecc--cccCCchhhhhcc
Q 042887 125 KALIYEY--MKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~--~~~g~L~~~l~~~ 144 (628)
+.+|+|| +.+|+|.+++.+.
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~ 101 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC 101 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc
Confidence 4478999 6689999999653
No 382
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.66 E-value=2.7e-08 Score=98.55 Aligned_cols=93 Identities=23% Similarity=0.365 Sum_probs=75.7
Q ss_pred CCCCcCceeecCCceeEEEEEECCC-----CcEEEEEEeecccc-chhhhHHHHHHHHhhcCCCCcccccceeeeccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGET-----GTTVAVKVMNLKQK-GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKG 121 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~-----~~~~avK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 121 (628)
.+|++.+.||+|+||.||+|.+..+ ++.||+|+++.... ...+.+.+|+.++..++||||+++++++. .
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-----~ 79 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVT-----K 79 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-----C
Confidence 3577788999999999999987543 47799999975432 33466889999999999999999999854 3
Q ss_pred cceeeeeecccccCCchhhhhccc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
....++++||++++++.+++....
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~ 103 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRS 103 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcC
Confidence 667899999999999999986443
No 383
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.65 E-value=5.7e-08 Score=98.75 Aligned_cols=96 Identities=20% Similarity=0.299 Sum_probs=77.4
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
.++|++.+.||+|+||.||+|....+|+.||+|.+.... ......+.+|+.+++.++||||+++++++.... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCce
Confidence 368999999999999999999999999999999987542 234567788999999999999999998754311 23457
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.++||||+. |++.+++...
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~ 101 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSD 101 (334)
T ss_pred EEEEEehhh-hhHHHHhccC
Confidence 899999996 5888877543
No 384
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=98.65 E-value=2.6e-08 Score=97.82 Aligned_cols=86 Identities=30% Similarity=0.524 Sum_probs=70.9
Q ss_pred ceeecCCceeEEEEEECCCC------cEEEEEEeeccc-cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 54 NMIGQGSFGFVYKGKLGETG------TTVAVKVMNLKQ-KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~------~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+.||+|+||.||+|++.... +.+|+|.+.... ......+.+|+.+++.++||||+++++.+. .....+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL-----LNEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeec-----CCCCeE
Confidence 36899999999999986433 679999886542 234567899999999999999999999854 366789
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
++|||+++|++.+++.+.
T Consensus 76 ~v~e~~~~~~L~~~l~~~ 93 (269)
T cd05044 76 IIMELMEGGDLLSYLRDA 93 (269)
T ss_pred EEEeccCCCcHHHHHHHh
Confidence 999999999999999754
No 385
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.65 E-value=8e-10 Score=99.76 Aligned_cols=97 Identities=22% Similarity=0.441 Sum_probs=76.7
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeec---cccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSI---DFKG 121 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~---~~~~ 121 (628)
...|+-...||+|.||.||+|+.+.+|+.||+|++-.. ..+-.....+|++++..++|+|++.+++.|... ....
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 34577778899999999999999999999999877432 334455678999999999999999999999762 2223
Q ss_pred cceeeeeecccccCCchhhhhcc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
...+|+||++|+. +|...+...
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~ 117 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNR 117 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCc
Confidence 4569999999985 777666544
No 386
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.65 E-value=4.5e-08 Score=95.64 Aligned_cols=90 Identities=21% Similarity=0.248 Sum_probs=73.3
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-----cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-----KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
+|.+.+.||+|+||.||++.+...+..+++|..+... ......+.+|+.++++++||||+++++.+ ....
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASF-----LERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHH-----hcCC
Confidence 4788899999999999999998777777777765421 22344577899999999999999999984 4467
Q ss_pred eeeeeecccccCCchhhhhc
Q 042887 124 FKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~ 143 (628)
..++++||++++++.+++.+
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~ 95 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEE 95 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHH
Confidence 78999999999999988864
No 387
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=98.64 E-value=9.1e-09 Score=100.74 Aligned_cols=95 Identities=21% Similarity=0.331 Sum_probs=82.2
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
.+.|..-++||+|+||.||.++.+.+|+.||+|.+.+.. +........|..++.++..+.||.+..+ |++.+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA-----feTkd 258 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA-----FETKD 258 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee-----ecCCC
Confidence 456788899999999999999999999999999986542 3445567889999999999999998877 77899
Q ss_pred eeeeeecccccCCchhhhhcccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSND 146 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~ 146 (628)
..++|+..|.||||..+|...+.
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~ 281 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGN 281 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCC
Confidence 99999999999999999877663
No 388
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=98.63 E-value=1.1e-08 Score=93.56 Aligned_cols=93 Identities=22% Similarity=0.382 Sum_probs=79.5
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-----c---chhhhHHHHHHHHhhcC-CCCcccccceeeec
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-----K---GAAKSFVTECEALSNVR-HRNLIKIITVCSSI 117 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-----~---~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~ 117 (628)
..+|...+.+|.|.-+.|.++.++++|+.+|+|++.... + .-.+.-.+|+++|+++. ||+|+++.+.
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~---- 91 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV---- 91 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee----
Confidence 467888999999999999999999999999999996532 1 12345678999999995 9999999999
Q ss_pred cccccceeeeeecccccCCchhhhhcc
Q 042887 118 DFKGVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 118 ~~~~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
+++..++++|+|.|+.|+|.+++...
T Consensus 92 -yes~sF~FlVFdl~prGELFDyLts~ 117 (411)
T KOG0599|consen 92 -YESDAFVFLVFDLMPRGELFDYLTSK 117 (411)
T ss_pred -ccCcchhhhhhhhcccchHHHHhhhh
Confidence 67799999999999999999999654
No 389
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.63 E-value=5.6e-08 Score=98.97 Aligned_cols=94 Identities=21% Similarity=0.327 Sum_probs=76.5
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhc-CCCCcccccceeeecccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~ 122 (628)
..++|++.+.||+|+||.||+|.+..+|+.+|+|.+... .......+.+|+.+++++ +||||+++++++.. ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~---~~~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA---END 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc---CCC
Confidence 456799999999999999999999888999999988542 223345678899999999 99999999998642 234
Q ss_pred ceeeeeecccccCCchhhhhc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~ 143 (628)
...|+||||++ +++.+++..
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~ 101 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRA 101 (337)
T ss_pred ceEEEEecccc-cCHHHHHhc
Confidence 56899999998 588887754
No 390
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.62 E-value=8.1e-08 Score=95.14 Aligned_cols=90 Identities=29% Similarity=0.432 Sum_probs=73.9
Q ss_pred CCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc-chhhhHHHHHHHHhhcC-CCCcccccceeeeccccccceeee
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK-GAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
|++.+.||+|+||.||+|....+++.||+|.+..... .......+|+..+++++ ||||+++++.+ ......++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~-----~~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVF-----RENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHh-----hcCCcEEE
Confidence 6778899999999999999988899999999865422 22334567999999999 99999999985 44788999
Q ss_pred eecccccCCchhhhhccc
Q 042887 128 IYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~~ 145 (628)
||||+ +|++.+++....
T Consensus 76 v~e~~-~~~l~~~~~~~~ 92 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRK 92 (283)
T ss_pred EEecC-CCCHHHHHHhcc
Confidence 99999 788988876543
No 391
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=98.60 E-value=8.8e-08 Score=95.16 Aligned_cols=91 Identities=24% Similarity=0.309 Sum_probs=74.5
Q ss_pred CCCcCceeecCCceeEEEEEEC---CCCcEEEEEEeeccc----cchhhhHHHHHHHHhhc-CCCCcccccceeeecccc
Q 042887 49 NFSASNMIGQGSFGFVYKGKLG---ETGTTVAVKVMNLKQ----KGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFK 120 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~---~~~~~~avK~~~~~~----~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 120 (628)
+|++.+.||+|+||.||+|+.. .+++.||+|+++... ....+.+.+|+.++.++ .||+|+++++.+ .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAF-----Q 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheee-----e
Confidence 4778899999999999999864 457889999987532 23445688999999999 599999999884 4
Q ss_pred ccceeeeeecccccCCchhhhhcc
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
.....++||||+++|++.+++...
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~ 99 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQR 99 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhc
Confidence 577899999999999999888643
No 392
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.60 E-value=8.4e-08 Score=97.39 Aligned_cols=95 Identities=21% Similarity=0.297 Sum_probs=77.3
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+|++.+.||+|+||.||+|++..+++.||+|.+.... ....+.+.+|+.+++.++|+||+++.+++...........|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788899999999999999998889999999987643 34456789999999999999999999986542212334789
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
++|||+++ ++.+++...
T Consensus 81 lv~e~~~~-~l~~~l~~~ 97 (330)
T cd07834 81 IVTELMET-DLHKVIKSP 97 (330)
T ss_pred EEecchhh-hHHHHHhCC
Confidence 99999984 788877643
No 393
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.60 E-value=2.2e-08 Score=109.55 Aligned_cols=72 Identities=24% Similarity=0.403 Sum_probs=62.8
Q ss_pred HHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc-ccchhhhHHHHHHHHhhcCCCCcccccceeee
Q 042887 45 KATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK-QKGAAKSFVTECEALSNVRHRNLIKIITVCSS 116 (628)
Q Consensus 45 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 116 (628)
.-..+|+..+.+|+||||.||+++.+-+|+.||||++... +...-..+.||+..++++.|||||+++.++.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVE 548 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVE 548 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhc
Confidence 3456788899999999999999999999999999999765 33445678899999999999999999999764
No 394
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=98.59 E-value=1.7e-07 Score=94.24 Aligned_cols=89 Identities=29% Similarity=0.388 Sum_probs=73.1
Q ss_pred CCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
|...+.||+|+||.||+|....+|+.||+|.+.... ....+.+.+|+++++.++|||++++++++.+ ....|
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-----EHTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe-----CCEEE
Confidence 666678999999999999998899999999986532 2234568899999999999999999998643 67889
Q ss_pred eeecccccCCchhhhhcc
Q 042887 127 LIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~ 144 (628)
+||||+. |++.+++...
T Consensus 98 lv~e~~~-~~l~~~l~~~ 114 (313)
T cd06633 98 LVMEYCL-GSASDLLEVH 114 (313)
T ss_pred EEEecCC-CCHHHHHHhc
Confidence 9999996 5677666543
No 395
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=98.59 E-value=1.1e-07 Score=94.18 Aligned_cols=91 Identities=24% Similarity=0.341 Sum_probs=71.9
Q ss_pred CCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcC-CCCcccccceeeeccccccceeee
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
|++.+.||+|+||.||+|.+..+++.||+|.++... ........+|+.++.++. |+||+++++++.+ ...+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~---~~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFD---RKTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEec---CCCCcEEE
Confidence 677889999999999999999899999999986542 222234568999999885 9999999998653 12267899
Q ss_pred eecccccCCchhhhhcc
Q 042887 128 IYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~ 144 (628)
||||++ |++.+++...
T Consensus 78 v~e~~~-~~l~~~l~~~ 93 (282)
T cd07831 78 VFELMD-MNLYELIKGR 93 (282)
T ss_pred EEecCC-ccHHHHHHhc
Confidence 999997 4777777653
No 396
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=98.59 E-value=1e-07 Score=93.78 Aligned_cols=94 Identities=27% Similarity=0.457 Sum_probs=72.4
Q ss_pred CCcCceeecCCceeEEEEEECC---CCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeecccc-ccc
Q 042887 50 FSASNMIGQGSFGFVYKGKLGE---TGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFK-GVD 123 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~---~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~-~~~ 123 (628)
|.+.+.||+|+||.||+|.+.. +++.||+|.+... .....+++.+|+.+++.++||||+++++.+...... ...
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 5677899999999999998653 4688999998653 233456788999999999999999999986531111 112
Q ss_pred eeeeeecccccCCchhhhhc
Q 042887 124 FKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~ 143 (628)
..++++||+++|++.+++..
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~ 100 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLM 100 (273)
T ss_pred ceEEEEecCCCCcHHHHHHH
Confidence 45788999999999888753
No 397
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.58 E-value=2.7e-09 Score=87.35 Aligned_cols=85 Identities=25% Similarity=0.291 Sum_probs=43.0
Q ss_pred cCCCCEeeCcCCcCcccCCccccCCCCCCeEECcCceeeeecCccccCCCCCCEEECCCCcccccCchhhhcccCCCeEe
Q 042887 485 LRNLAEFDLSENHFSNEIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRNNLSGQIPKYLENLLFLAYLN 564 (628)
Q Consensus 485 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 564 (628)
...|+..+|++|.+....+..-...+.++.|+|++|.|+ .+|..+..++.|+.|+++.|++. ..|+.+..+.+|-.||
T Consensus 52 ~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 52 GYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLD 129 (177)
T ss_pred CceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhc
Confidence 344444555555555322222223345555555555555 34444555555555555555555 4445444455555555
Q ss_pred ccCCcCc
Q 042887 565 LSYNHFE 571 (628)
Q Consensus 565 ls~N~l~ 571 (628)
..+|.+.
T Consensus 130 s~~na~~ 136 (177)
T KOG4579|consen 130 SPENARA 136 (177)
T ss_pred CCCCccc
Confidence 5555543
No 398
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.58 E-value=1.2e-07 Score=92.06 Aligned_cols=84 Identities=26% Similarity=0.369 Sum_probs=72.4
Q ss_pred eecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeeccc
Q 042887 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYM 132 (628)
Q Consensus 56 iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 132 (628)
||+|+||.||++.+..+++.+|+|.+.... ......+.+|+.++++++||||+++++.+ +.....+++|||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF-----QTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHe-----ecCCeeEEEEecC
Confidence 699999999999998889999999987543 22456788999999999999999999884 4578899999999
Q ss_pred ccCCchhhhhcc
Q 042887 133 KCGSSEDWMHQS 144 (628)
Q Consensus 133 ~~g~L~~~l~~~ 144 (628)
+++++.+++...
T Consensus 76 ~~~~L~~~l~~~ 87 (250)
T cd05123 76 PGGELFSHLSKE 87 (250)
T ss_pred CCCcHHHHHHhc
Confidence 999999998654
No 399
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.58 E-value=2.4e-09 Score=110.49 Aligned_cols=198 Identities=25% Similarity=0.276 Sum_probs=129.9
Q ss_pred cccEEEccCCcceeeC-chhhhccCCcCeeeeccccccccCCcCCCCC-CCCCeEecccCcccc---cc---CccccC--
Q 042887 363 KITVIGMGDNQISGTI-PSEIKNLVNINAFGVEYNQLTGTIPHAIGEL-KNLQGLALVRNSLRG---TI---PDTLGN-- 432 (628)
Q Consensus 363 ~L~~L~l~~n~l~~~~-~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~L~~n~l~~---~~---~~~~~~-- 432 (628)
+.+.+.+-.-.-.+.. |-.+....+|+.|.+.++.+.. ...+..+ ..|++|- -+|.+.. .+ ...+++
T Consensus 85 kt~~lkl~~~pa~~pt~pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LI-C~~Sl~Al~~v~ascggd~~ns~ 161 (1096)
T KOG1859|consen 85 KTKVLKLLPSPARDPTEPISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLI-CHNSLDALRHVFASCGGDISNSP 161 (1096)
T ss_pred hheeeeecccCCCCCCCCceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhh-hhccHHHHHHHHHHhccccccch
Confidence 4455544433322222 4456778899999999998862 1111111 1233332 2232221 00 011111
Q ss_pred -CCCCCeEecCCcccccccCCcccCCcchhcccceEEcCCCcCccccchhhhccCCCCEeeCcCCcCcccCCccccCCCC
Q 042887 433 -LTLLNRLFLGFNNLQGNVPSSLGNCQNLMTLSRLLDLSGNLLGGSIPLEVGNLRNLAEFDLSENHFSNEIPVTLSACTT 511 (628)
Q Consensus 433 -l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 511 (628)
...|...+.++|++. .+..++.-++.+ +.|||++|+++.. ..+..++.|++|||++|.+....-....++.
T Consensus 162 ~Wn~L~~a~fsyN~L~-~mD~SLqll~al----e~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~- 233 (1096)
T KOG1859|consen 162 VWNKLATASFSYNRLV-LMDESLQLLPAL----ESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK- 233 (1096)
T ss_pred hhhhHhhhhcchhhHH-hHHHHHHHHHHh----hhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-
Confidence 245777788899987 566666666666 8899999999843 3788899999999999999843323334444
Q ss_pred CCeEECcCceeeeecCccccCCCCCCEEECCCCcccccC-chhhhcccCCCeEeccCCcCccc
Q 042887 512 LEYLHLQGNSFSGSLPLSLKTLKSIKELDLSRNNLSGQI-PKYLENLLFLAYLNLSYNHFEGE 573 (628)
Q Consensus 512 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~ls~N~l~~~ 573 (628)
|+.|.+++|.++. -..+.++.+|+.||+++|-|.+.- -..+..|..|+.|+|.+|++...
T Consensus 234 L~~L~lrnN~l~t--L~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 234 LQLLNLRNNALTT--LRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred heeeeecccHHHh--hhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 9999999999872 235788999999999999987542 23466778899999999998753
No 400
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.58 E-value=1.7e-07 Score=94.61 Aligned_cols=86 Identities=22% Similarity=0.305 Sum_probs=67.8
Q ss_pred CceeecCCceeEEEEEEC--CCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeec
Q 042887 53 SNMIGQGSFGFVYKGKLG--ETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYE 130 (628)
Q Consensus 53 ~~~iG~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 130 (628)
.+.||+|+||.||+|++. .+++.||+|.+.... ....+.+|+.++++++||||+++++++.+ ......+++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS---HADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEec---CCCcEEEEEEe
Confidence 367999999999999975 366889999886432 23457899999999999999999988653 33567899999
Q ss_pred ccccCCchhhhhcc
Q 042887 131 YMKCGSSEDWMHQS 144 (628)
Q Consensus 131 ~~~~g~L~~~l~~~ 144 (628)
|+.+ ++.+++...
T Consensus 81 ~~~~-~l~~~~~~~ 93 (317)
T cd07868 81 YAEH-DLWHIIKFH 93 (317)
T ss_pred ccCC-CHHHHHHhc
Confidence 9874 777776543
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=98.57 E-value=1.9e-07 Score=88.73 Aligned_cols=91 Identities=27% Similarity=0.491 Sum_probs=78.3
Q ss_pred CCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccc-hhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeee
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG-AAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALI 128 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv 128 (628)
|.+.+.||+|+||.||+|...++++.+|+|........ ..+.+.+|++.+++++|+|++++++.+. .....+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-----~~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFE-----DPEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeee-----cCCceEEE
Confidence 56678999999999999999888999999999765544 5678899999999999999999999854 35788999
Q ss_pred ecccccCCchhhhhccc
Q 042887 129 YEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 129 ~e~~~~g~L~~~l~~~~ 145 (628)
+|+++++++.+++....
T Consensus 76 ~e~~~~~~L~~~~~~~~ 92 (225)
T smart00221 76 MEYCEGGDLFDYLRKKG 92 (225)
T ss_pred EeccCCCCHHHHHHhcc
Confidence 99999999999886543
No 402
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.57 E-value=1.5e-07 Score=93.14 Aligned_cols=90 Identities=28% Similarity=0.486 Sum_probs=75.5
Q ss_pred CCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc--chhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK--GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
|++.+.||+|++|.||+|....+++.+|+|.+..... .....+.+|+.++++++|+||+++++.+. .....++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR-----HKGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc-----cCCCEEE
Confidence 5677899999999999999988999999999875432 34567889999999999999999999854 4688999
Q ss_pred eecccccCCchhhhhccc
Q 042887 128 IYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~~ 145 (628)
++||+++ ++.+++....
T Consensus 76 v~e~~~~-~l~~~l~~~~ 92 (283)
T cd05118 76 VFEFMDT-DLYKLIKDRQ 92 (283)
T ss_pred EEeccCC-CHHHHHHhhc
Confidence 9999985 8887776543
No 403
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.57 E-value=1.3e-07 Score=95.03 Aligned_cols=91 Identities=29% Similarity=0.369 Sum_probs=74.1
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
..|+..+.||+|+||.||+|++..+++.+|+|.+... ......++.+|+++++.++|+|++++.+++.+ ...
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 89 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----EHT 89 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CCe
Confidence 4477778899999999999999889999999998643 22334568899999999999999999998543 678
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.++||||+. |++.+.+...
T Consensus 90 ~~lv~e~~~-~~l~~~~~~~ 108 (308)
T cd06634 90 AWLVMEYCL-GSASDLLEVH 108 (308)
T ss_pred eEEEEEccC-CCHHHHHHHc
Confidence 899999997 5777766443
No 404
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=98.56 E-value=2e-07 Score=91.39 Aligned_cols=94 Identities=22% Similarity=0.228 Sum_probs=70.6
Q ss_pred HHHHHhCCCCcCcee--ecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhc-CCCCcccccceeeecc
Q 042887 42 DLSKATNNFSASNMI--GQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV-RHRNLIKIITVCSSID 118 (628)
Q Consensus 42 ~~~~~~~~~~~~~~i--G~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 118 (628)
+.....++|++.+.+ |+|+||.||+++...+++.+|+|.......... |+.....+ +||||+++++.+.
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~--- 79 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVT--- 79 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEe---
Confidence 334445677776666 999999999999999999999999865432111 22222222 6999999999854
Q ss_pred ccccceeeeeecccccCCchhhhhccc
Q 042887 119 FKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.....++||||+++|+|.+++....
T Consensus 80 --~~~~~~iv~e~~~~~~L~~~l~~~~ 104 (267)
T PHA03390 80 --TLKGHVLIMDYIKDGDLFDLLKKEG 104 (267)
T ss_pred --cCCeeEEEEEcCCCCcHHHHHHhcC
Confidence 3678999999999999999987643
No 405
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=98.56 E-value=1.7e-07 Score=91.48 Aligned_cols=86 Identities=22% Similarity=0.334 Sum_probs=67.5
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeecccc---chhhhHHHHHHHHh-hcCCCCcccccceeeeccccccceeeeee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK---GAAKSFVTECEALS-NVRHRNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~E~~~l~-~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.||+|+||.||+|.+..+|+.||+|.+..... .....+..|..++. ..+|+|++++++.+. .....|+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ-----SKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE-----cCCeEEEEE
Confidence 569999999999999988999999999865431 22234455555443 447999999999854 467899999
Q ss_pred cccccCCchhhhhcc
Q 042887 130 EYMKCGSSEDWMHQS 144 (628)
Q Consensus 130 e~~~~g~L~~~l~~~ 144 (628)
||+++++|.+++...
T Consensus 77 e~~~~~~L~~~l~~~ 91 (260)
T cd05611 77 EYLNGGDCASLIKTL 91 (260)
T ss_pred eccCCCCHHHHHHHc
Confidence 999999999988643
No 406
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.55 E-value=1.2e-07 Score=93.73 Aligned_cols=89 Identities=25% Similarity=0.506 Sum_probs=76.0
Q ss_pred CCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
|+..+.||+|+||.||+|+...+++.||+|.+.... ....+.+.+|+.+++.++|+|++++++++. .....++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH-----TERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh-----cCCceEE
Confidence 566788999999999999999899999999997653 334567889999999999999999999854 4688999
Q ss_pred eecccccCCchhhhhcc
Q 042887 128 IYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~ 144 (628)
|+||++ +++.+++.+.
T Consensus 76 v~e~~~-~~l~~~i~~~ 91 (282)
T cd07829 76 VFEYCD-MDLKKYLDKR 91 (282)
T ss_pred EecCcC-cCHHHHHHhh
Confidence 999998 5899988765
No 407
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=98.55 E-value=7.5e-08 Score=99.27 Aligned_cols=91 Identities=20% Similarity=0.361 Sum_probs=75.5
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcC-C-----CCcccccceeeeccccc
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVR-H-----RNLIKIITVCSSIDFKG 121 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~nIv~l~~~~~~~~~~~ 121 (628)
.+|++.+.||+|+||.|.+|.+.++++.||||+++.... -..+...|+.+|..++ | -|+|++++++ .-
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F-----~f 259 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF-----YF 259 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc-----cc
Confidence 478999999999999999999999999999999975432 3455667899999886 3 4899999994 44
Q ss_pred cceeeeeecccccCCchhhhhccc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
..+.++|+|... -.|+++++...
T Consensus 260 r~HlciVfELL~-~NLYellK~n~ 282 (586)
T KOG0667|consen 260 RNHLCIVFELLS-TNLYELLKNNK 282 (586)
T ss_pred ccceeeeehhhh-hhHHHHHHhcC
Confidence 889999999886 48999997654
No 408
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=98.55 E-value=2e-07 Score=92.13 Aligned_cols=85 Identities=25% Similarity=0.314 Sum_probs=64.7
Q ss_pred eeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHH---hhcCCCCcccccceeeeccccccceeeee
Q 042887 55 MIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEAL---SNVRHRNLIKIITVCSSIDFKGVDFKALI 128 (628)
Q Consensus 55 ~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l---~~l~h~nIv~l~~~~~~~~~~~~~~~~lv 128 (628)
.||+|+||.||++....+++.||+|.+.... ......+.+|..++ ....||+|+.+++.+. ..+..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH-----TPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe-----cCCeEEEE
Confidence 4899999999999999899999999986542 11223344554433 3346999999988843 46788999
Q ss_pred ecccccCCchhhhhcc
Q 042887 129 YEYMKCGSSEDWMHQS 144 (628)
Q Consensus 129 ~e~~~~g~L~~~l~~~ 144 (628)
|||+++|+|.+++...
T Consensus 76 ~e~~~~~~L~~~i~~~ 91 (279)
T cd05633 76 LDLMNGGDLHYHLSQH 91 (279)
T ss_pred EecCCCCCHHHHHHhc
Confidence 9999999999888654
No 409
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.54 E-value=2.1e-07 Score=93.59 Aligned_cols=96 Identities=21% Similarity=0.371 Sum_probs=75.1
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecc---ccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSID---FKG 121 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---~~~ 121 (628)
.++|++.+.||+|+||.||+|++..+++.+|+|.+.... ......+.+|+++++.++||||+++++.+.... ...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999999999999999986542 223346789999999999999999998764311 123
Q ss_pred cceeeeeecccccCCchhhhhc
Q 042887 122 VDFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~ 143 (628)
....++|+||+.+ ++.+.+..
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~ 107 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN 107 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc
Confidence 4568999999875 56555543
No 410
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.54 E-value=3.3e-08 Score=101.06 Aligned_cols=91 Identities=20% Similarity=0.351 Sum_probs=75.0
Q ss_pred cCceeecCCceeEEEEEECCCCcEEEEEEeecc----ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeee
Q 042887 52 ASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK----QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 52 ~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
...+||+|+|-+||+|.+..+|..||=-.++.. .....++|..|+++|+.|+|||||++++.|.+. ..+..-+
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~---~n~~in~ 120 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT---DNKTINF 120 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC---CCceeee
Confidence 457899999999999999888888774433322 234458899999999999999999999998762 2467889
Q ss_pred eecccccCCchhhhhccc
Q 042887 128 IYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~~ 145 (628)
|+|.+.+|+|.+|.++.+
T Consensus 121 iTEL~TSGtLr~Y~kk~~ 138 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKKHR 138 (632)
T ss_pred eeecccCCcHHHHHHHhc
Confidence 999999999999998776
No 411
>PTZ00284 protein kinase; Provisional
Probab=98.53 E-value=1.9e-07 Score=99.51 Aligned_cols=93 Identities=20% Similarity=0.300 Sum_probs=70.0
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCC------Ccccccceeeeccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHR------NLIKIITVCSSIDF 119 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~------nIv~l~~~~~~~~~ 119 (628)
..++|++.+.||+|+||.||+|.+..+++.||||+++.... ..+.+.+|+.+++.++|. +++++++++..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~--- 202 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN--- 202 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc---
Confidence 45789999999999999999999998999999999965322 234456777777777654 46777766432
Q ss_pred cccceeeeeecccccCCchhhhhcc
Q 042887 120 KGVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
.....++|||++ ++++.+++.+.
T Consensus 203 -~~~~~~iv~~~~-g~~l~~~l~~~ 225 (467)
T PTZ00284 203 -ETGHMCIVMPKY-GPCLLDWIMKH 225 (467)
T ss_pred -CCceEEEEEecc-CCCHHHHHHHc
Confidence 245788999987 67888877654
No 412
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=98.51 E-value=2.7e-07 Score=91.13 Aligned_cols=85 Identities=22% Similarity=0.284 Sum_probs=64.8
Q ss_pred eeecCCceeEEEEEECCCCcEEEEEEeecccc---chhhhHHHHHH---HHhhcCCCCcccccceeeeccccccceeeee
Q 042887 55 MIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK---GAAKSFVTECE---ALSNVRHRNLIKIITVCSSIDFKGVDFKALI 128 (628)
Q Consensus 55 ~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~E~~---~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv 128 (628)
.||+|+||.||+|.+..+++.||+|.+..... .....+..|.. .++...||+|+++++.+ ...+..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----HTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCEEEEE
Confidence 48999999999999988999999999875421 11222344443 34445799999998884 447789999
Q ss_pred ecccccCCchhhhhcc
Q 042887 129 YEYMKCGSSEDWMHQS 144 (628)
Q Consensus 129 ~e~~~~g~L~~~l~~~ 144 (628)
|||+++|+|.+++...
T Consensus 76 ~e~~~g~~L~~~l~~~ 91 (278)
T cd05606 76 LDLMNGGDLHYHLSQH 91 (278)
T ss_pred EecCCCCcHHHHHHhc
Confidence 9999999999888643
No 413
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.51 E-value=4.4e-08 Score=99.79 Aligned_cols=91 Identities=18% Similarity=0.278 Sum_probs=78.3
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccce
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
..|..++.||-|+||+|.+++..++...||+|.+.+.+ +..+.....|-+||.+-+.+.||+++.. |++.+.
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS-----FQDkdn 703 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS-----FQDKDN 703 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE-----eccCCc
Confidence 34677889999999999999998898899999997753 4556667889999999999999999988 677999
Q ss_pred eeeeecccccCCchhhhhc
Q 042887 125 KALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~ 143 (628)
.|+||||++|||+-..+.+
T Consensus 704 LYFVMdYIPGGDmMSLLIr 722 (1034)
T KOG0608|consen 704 LYFVMDYIPGGDMMSLLIR 722 (1034)
T ss_pred eEEEEeccCCccHHHHHHH
Confidence 9999999999998776643
No 414
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=98.51 E-value=5e-08 Score=89.39 Aligned_cols=92 Identities=18% Similarity=0.330 Sum_probs=78.9
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcC-CCCcccccceeeecccccccee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.+.|.+.+.+|+|.||++-+++++.+...+++|.+..... ..+.|.||..+--.+. |.||+..+++. |++.+..
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~va----Fqt~d~Y 97 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVA----FQTSDAY 97 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHH----hhcCceE
Confidence 4578899999999999999999999999999999976533 3578999998766774 99999988864 7788999
Q ss_pred eeeecccccCCchhhhhc
Q 042887 126 ALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~ 143 (628)
.+++||++.|+|...+..
T Consensus 98 vF~qE~aP~gdL~snv~~ 115 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEA 115 (378)
T ss_pred EEeeccCccchhhhhcCc
Confidence 999999999999987754
No 415
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.51 E-value=3.8e-07 Score=93.02 Aligned_cols=94 Identities=23% Similarity=0.300 Sum_probs=73.2
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeecc-ccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSID-FKGVD 123 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~~~ 123 (628)
..+|...+.||+|+||.||+|++..+|+.||+|.+.... ......+.+|+.+++.++||||+++++++.... .....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 368999999999999999999998899999999986532 223456889999999999999999999865411 12234
Q ss_pred eeeeeecccccCCchhhh
Q 042887 124 FKALIYEYMKCGSSEDWM 141 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l 141 (628)
..++|+||+.. ++.++.
T Consensus 94 ~~~lv~e~~~~-~l~~~~ 110 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM 110 (342)
T ss_pred eEEEEeccccc-CHHHHH
Confidence 56899999864 555443
No 416
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.50 E-value=3.4e-07 Score=92.33 Aligned_cols=84 Identities=23% Similarity=0.313 Sum_probs=66.8
Q ss_pred ceeecCCceeEEEEEECC--CCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeecc
Q 042887 54 NMIGQGSFGFVYKGKLGE--TGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEY 131 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~--~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~ 131 (628)
..||+|+||.||+|+... +++.||+|.+.... ....+.+|+.++++++||||+++++++.. ......+++|||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLS---HSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEec---cCCCeEEEEEee
Confidence 579999999999999753 56789999886432 23467899999999999999999998653 345678999999
Q ss_pred cccCCchhhhhc
Q 042887 132 MKCGSSEDWMHQ 143 (628)
Q Consensus 132 ~~~g~L~~~l~~ 143 (628)
+.+ ++.+++..
T Consensus 82 ~~~-~l~~~~~~ 92 (317)
T cd07867 82 AEH-DLWHIIKF 92 (317)
T ss_pred eCC-cHHHHHHh
Confidence 875 67777643
No 417
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.50 E-value=2.4e-07 Score=97.48 Aligned_cols=99 Identities=14% Similarity=0.284 Sum_probs=69.3
Q ss_pred HhCCCCcCceeecCCceeEEEEEEC----------------CCCcEEEEEEeeccccchh--------------hhHHHH
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLG----------------ETGTTVAVKVMNLKQKGAA--------------KSFVTE 95 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~----------------~~~~~~avK~~~~~~~~~~--------------~~~~~E 95 (628)
..++|++.++||+|+||.||+|... ..++.||||.+........ +.+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4678999999999999999999752 2456799999865432222 334456
Q ss_pred HHHHhhcCCCCc-----ccccceeeec---cccccceeeeeecccccCCchhhhhcc
Q 042887 96 CEALSNVRHRNL-----IKIITVCSSI---DFKGVDFKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 96 ~~~l~~l~h~nI-----v~l~~~~~~~---~~~~~~~~~lv~e~~~~g~L~~~l~~~ 144 (628)
+.++.+++|.++ ++++++|... ........++|+||+++|+|.+++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~ 279 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGK 279 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhc
Confidence 777777766554 4555555421 011235679999999999999999754
No 418
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.49 E-value=2.1e-07 Score=95.01 Aligned_cols=97 Identities=20% Similarity=0.261 Sum_probs=76.3
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeeccc-ccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDF-KGV 122 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~-~~~ 122 (628)
..++|++.+.||+|+||.||+|++..+++.||+|.+... .....+.+.+|+.+++.++||||+++.+++...+. ...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 356799999999999999999999989999999988643 22344667889999999999999999887543111 222
Q ss_pred ceeeeeecccccCCchhhhhc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~ 143 (628)
...++|+||+ ++++.+++..
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~ 112 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC 112 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc
Confidence 3589999998 5688888754
No 419
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.47 E-value=3.3e-08 Score=88.29 Aligned_cols=89 Identities=20% Similarity=0.403 Sum_probs=75.6
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcC-CCCcccccceeeeccccccce
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~~ 124 (628)
.+++|++.+.+|+|.|+.||.|....+++.++||+++.... +.+.||+.+++.+. ||||++++++..+ ...+.
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk---kKIkREikIL~nL~gg~NIi~L~DiV~D---p~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK---KKIKREIKILQNLRGGPNIIKLLDIVKD---PESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH---HHHHHHHHHHHhccCCCCeeehhhhhcC---ccccC
Confidence 46789999999999999999999988999999999976543 56889999999997 9999999998765 23456
Q ss_pred eeeeecccccCCchhh
Q 042887 125 KALIYEYMKCGSSEDW 140 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~ 140 (628)
..+++||+.+.+....
T Consensus 110 paLiFE~v~n~Dfk~l 125 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQL 125 (338)
T ss_pred chhHhhhhccccHHHH
Confidence 7899999988776544
No 420
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.47 E-value=4.6e-07 Score=89.85 Aligned_cols=94 Identities=23% Similarity=0.408 Sum_probs=72.6
Q ss_pred CCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhc---CCCCcccccceeeeccccccce
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNV---RHRNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~~~~~~ 124 (628)
|++.+.||+|+||.||+|++..+++.||+|.+.... ......+.+|+.+++++ .|||++++++.+.+.+......
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 677889999999999999998889999999997532 22345577888877666 5999999999976533223345
Q ss_pred eeeeecccccCCchhhhhcc
Q 042887 125 KALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~ 144 (628)
.+++|||+.+ ++.+++...
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~ 99 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKC 99 (287)
T ss_pred eEEEehhccc-CHHHHHHHc
Confidence 8999999985 788877543
No 421
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.47 E-value=3e-07 Score=92.56 Aligned_cols=80 Identities=26% Similarity=0.238 Sum_probs=65.2
Q ss_pred CceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeecccccCCc
Q 042887 60 SFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSS 137 (628)
Q Consensus 60 ~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L 137 (628)
++|.||.++...+++.||+|++... .....+.+.+|+++++.++||||+++++++. .....+++|||+++|++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~-----~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFI-----VDSELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheee-----cCCeEEEEEeccCCCCH
Confidence 4455666666668999999999754 3345567999999999999999999999854 46788999999999999
Q ss_pred hhhhhcc
Q 042887 138 EDWMHQS 144 (628)
Q Consensus 138 ~~~l~~~ 144 (628)
.+++...
T Consensus 87 ~~~l~~~ 93 (314)
T cd08216 87 EDLLKTH 93 (314)
T ss_pred HHHHHHh
Confidence 9998754
No 422
>PHA03207 serine/threonine kinase US3; Provisional
Probab=98.46 E-value=3.1e-07 Score=95.53 Aligned_cols=86 Identities=17% Similarity=0.188 Sum_probs=70.0
Q ss_pred HhCCCCcCceeecCCceeEEEEEECC--CCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGE--TGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~--~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
...+|++.+.||+|+||.||+|.... +++.||+|.+... ....+|++++++++||||+++++++ ....
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~ 159 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAY-----RWKS 159 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeE-----eeCC
Confidence 34579999999999999999998643 4578999987543 2356899999999999999999884 3477
Q ss_pred eeeeeecccccCCchhhhh
Q 042887 124 FKALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~ 142 (628)
..+++||++. +++.+++.
T Consensus 160 ~~~lv~e~~~-~~l~~~l~ 177 (392)
T PHA03207 160 TVCMVMPKYK-CDLFTYVD 177 (392)
T ss_pred EEEEEehhcC-CCHHHHHH
Confidence 8999999986 57888773
No 423
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.46 E-value=7.6e-08 Score=90.57 Aligned_cols=94 Identities=20% Similarity=0.263 Sum_probs=77.4
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc---cchhhhHHHHHHHHhhc-CCCCcccccceeeecccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ---KGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~ 122 (628)
..+|.+.++||+|+|++|..++.+++.+.||+|++++.- ..+..=...|..+.... .||.+|.++.+ |++.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc-----fqte 323 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC-----FQTE 323 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh-----hccc
Confidence 467999999999999999999999999999999998742 22333345666666555 59999999998 7789
Q ss_pred ceeeeeecccccCCchhhhhccc
Q 042887 123 DFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.+.++|.||++||+|--+|.+.+
T Consensus 324 srlffvieyv~ggdlmfhmqrqr 346 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQRQR 346 (593)
T ss_pred ceEEEEEEEecCcceeeehhhhh
Confidence 99999999999999987776554
No 424
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.44 E-value=6.5e-08 Score=106.55 Aligned_cols=94 Identities=27% Similarity=0.396 Sum_probs=80.2
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc--cchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ--KGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
.+-+|+....||.|.||.||.|....+|+..|+|-+..+. ....+.+.+|..++..++|||+|+++++... ..
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH-----Re 1307 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH-----RE 1307 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec-----HH
Confidence 3456777888999999999999999999999999886543 3445667899999999999999999999764 67
Q ss_pred eeeeeecccccCCchhhhhcc
Q 042887 124 FKALIYEYMKCGSSEDWMHQS 144 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~ 144 (628)
..++-||||++|+|.+.+...
T Consensus 1308 kv~IFMEyC~~GsLa~ll~~g 1328 (1509)
T KOG4645|consen 1308 KVYIFMEYCEGGSLASLLEHG 1328 (1509)
T ss_pred HHHHHHHHhccCcHHHHHHhc
Confidence 789999999999999987654
No 425
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.44 E-value=3e-07 Score=84.48 Aligned_cols=80 Identities=15% Similarity=0.140 Sum_probs=57.1
Q ss_pred CceeecCCceeEEEEEECCCCcEEEEEEeeccccc--h-------hhhH-----------------HHHHHHHhhcCCCC
Q 042887 53 SNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--A-------AKSF-----------------VTECEALSNVRHRN 106 (628)
Q Consensus 53 ~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~-------~~~~-----------------~~E~~~l~~l~h~n 106 (628)
.+.||+|+||.||+|.+. +|+.||+|+++..... . ..+| .+|+..+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999996 8999999999754210 1 1122 34899999998887
Q ss_pred cccccceeeeccccccceeeeeecccccCCchhh
Q 042887 107 LIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDW 140 (628)
Q Consensus 107 Iv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 140 (628)
+....... ....++||||++++++...
T Consensus 81 v~~p~~~~-------~~~~~iVmE~i~g~~l~~~ 107 (190)
T cd05147 81 IPCPEPIL-------LKSHVLVMEFIGDDGWAAP 107 (190)
T ss_pred CCCCcEEE-------ecCCEEEEEEeCCCCCcch
Confidence 74433221 1234899999999876554
No 426
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=98.44 E-value=2.9e-07 Score=91.42 Aligned_cols=86 Identities=20% Similarity=0.215 Sum_probs=69.7
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcC-CCCcccccceeeecccccccee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
++|+..+.||+|+||.||++.+..+++.||+|.+.... ......+.+|+.++.++. ||||+++++++. .....
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~-----~~~~~ 78 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALF-----REGDC 78 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe-----cCCcE
Confidence 35666788999999999999999999999999987543 234567889999999996 999999999854 36778
Q ss_pred eeeecccccCCchh
Q 042887 126 ALIYEYMKCGSSED 139 (628)
Q Consensus 126 ~lv~e~~~~g~L~~ 139 (628)
+++|||+.. ++.+
T Consensus 79 ~~~~e~~~~-~l~~ 91 (288)
T cd06616 79 WICMELMDI-SLDK 91 (288)
T ss_pred EEEEecccC-CHHH
Confidence 899999874 4443
No 427
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.44 E-value=4.2e-07 Score=84.70 Aligned_cols=94 Identities=15% Similarity=0.051 Sum_probs=71.8
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccch---hhh------HHHHHHHHhhcCCCCcccccceeee
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGA---AKS------FVTECEALSNVRHRNLIKIITVCSS 116 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---~~~------~~~E~~~l~~l~h~nIv~l~~~~~~ 116 (628)
..++|+..+++|.|+||.||.+.. ++..+|+|.+....... ... +.+|+..+.++.||+|..+.+....
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 468899999999999999999766 56789999996542211 122 6799999999999999998876443
Q ss_pred cc---ccccceeeeeecccccCCchhhh
Q 042887 117 ID---FKGVDFKALIYEYMKCGSSEDWM 141 (628)
Q Consensus 117 ~~---~~~~~~~~lv~e~~~~g~L~~~l 141 (628)
.. +......+++|||++|.++.++.
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~ 134 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMP 134 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhh
Confidence 11 12245689999999999997763
No 428
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.42 E-value=6.9e-07 Score=89.12 Aligned_cols=92 Identities=21% Similarity=0.262 Sum_probs=73.0
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcC-CCCcccccceeeeccccccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~ 123 (628)
..++|++.+.||+|+||.||+|.+..+++.||+|.++... ......+.+|+.++.+.. ||||+++++.+. ...
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~ 87 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFI-----TDS 87 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeee-----cCC
Confidence 4567899999999999999999998889999999997543 223455777887777775 999999999964 367
Q ss_pred eeeeeecccccCCchhhhhc
Q 042887 124 FKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~ 143 (628)
..|++|||+. +.+.+.+..
T Consensus 88 ~~~~v~e~~~-~~l~~l~~~ 106 (296)
T cd06618 88 DVFICMELMS-TCLDKLLKR 106 (296)
T ss_pred eEEEEeeccC-cCHHHHHHH
Confidence 8999999985 466655543
No 429
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=98.41 E-value=5.2e-08 Score=90.56 Aligned_cols=104 Identities=20% Similarity=0.250 Sum_probs=82.7
Q ss_pred HHhCCCCc-CceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhc-CCCCcccccceeeecccccc
Q 042887 45 KATNNFSA-SNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGV 122 (628)
Q Consensus 45 ~~~~~~~~-~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~ 122 (628)
..+++|.+ .++||-|--|+|..+.++.+|+.+|+|++... ....||++..... .|||||.+++++.. .+...
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeN-s~~~r 131 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYEN-SYQGR 131 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhh-hccCc
Confidence 45788887 47899999999999999999999999988543 3456888876666 59999999998653 35667
Q ss_pred ceeeeeecccccCCchhhhhcccc-ccccccCC
Q 042887 123 DFKALIYEYMKCGSSEDWMHQSND-KLEAGNLG 154 (628)
Q Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~ 154 (628)
+...+|||+++||+|+..+.+++. ..++...+
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~ 164 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREAS 164 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHH
Confidence 889999999999999999987764 34444333
No 430
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.39 E-value=6.3e-08 Score=88.76 Aligned_cols=224 Identities=21% Similarity=0.266 Sum_probs=125.0
Q ss_pred cCcccEEEccCCccccccc----hhhhCCCCCCEEecccCcCc---cccc-------ccccCCCCCCEeecccccCcccC
Q 042887 161 LLKLEMIDVGDNQLIGKFP----DFIANFSALEAIDISANMLG---GRIP-------DSLCQLRSLNYLSISENNFSCKL 226 (628)
Q Consensus 161 l~~L~~L~Ls~n~l~~~~~----~~~~~l~~L~~L~Ls~n~l~---~~~~-------~~~~~l~~L~~L~Ls~N~i~~~~ 226 (628)
+..++.+|||+|.|...-. ..+.+-.+|++.++|.-... ..++ .++.++++|+..+||.|.+....
T Consensus 29 ~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~ 108 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEF 108 (388)
T ss_pred hcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCccc
Confidence 5678899999999976544 44556788888888864321 1122 34567888888888888887655
Q ss_pred CcC----ccCCCCCCEEEeecccCcccCC-hhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeeccc
Q 042887 227 PLS----IWNISSLEIISLHSNRFEGSLP-LNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKI 301 (628)
Q Consensus 227 p~~----~~~l~~L~~L~L~~n~l~~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 301 (628)
|.. +.+-+.|++|.+++|.+- .+. ..++..+.. |..| +-.++-+.|+......|++......
T Consensus 109 ~e~L~d~is~~t~l~HL~l~NnGlG-p~aG~rigkal~~-----la~n-------KKaa~kp~Le~vicgrNRlengs~~ 175 (388)
T COG5238 109 PEELGDLISSSTDLVHLKLNNNGLG-PIAGGRIGKALFH-----LAYN-------KKAADKPKLEVVICGRNRLENGSKE 175 (388)
T ss_pred chHHHHHHhcCCCceeEEeecCCCC-ccchhHHHHHHHH-----HHHH-------hhhccCCCceEEEeccchhccCcHH
Confidence 543 456677888888888764 221 111110000 1111 1223445677777777766432221
Q ss_pred ----ccccCCCCCEEEccCCcCCCcCCCCccccccccCCCCCceeecccCCcccccchHHH----hccccccEEEccCCc
Q 042887 302 ----DFNRLSNLSRLFLSKNNLGTESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIA----NLSAKITVIGMGDNQ 373 (628)
Q Consensus 302 ----~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~----~~~~~L~~L~l~~n~ 373 (628)
.|..-.+|+++.+..|.|.......+.+ ..+..+.+|+.||+++|.++......++ .++ .++.|.+.+|.
T Consensus 176 ~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~-~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~-~lrEL~lnDCl 253 (388)
T COG5238 176 LSAALLESHENLKEVKIQQNGIRPEGVTMLAF-LGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWN-LLRELRLNDCL 253 (388)
T ss_pred HHHHHHHhhcCceeEEeeecCcCcchhHHHHH-HHHHHhCcceeeeccccchhhhhHHHHHHHhcccc-hhhhccccchh
Confidence 1222256777777777665422221111 2344567778888888877655443333 333 35666666666
Q ss_pred ceeeCchhh------hccCCcCeeeecccccc
Q 042887 374 ISGTIPSEI------KNLVNINAFGVEYNQLT 399 (628)
Q Consensus 374 l~~~~~~~l------~~l~~L~~L~l~~n~l~ 399 (628)
++......+ ...++|..|...+|.+.
T Consensus 254 ls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~ 285 (388)
T COG5238 254 LSNEGVKSVLRRFNEKFVPNLMPLPGDYNERR 285 (388)
T ss_pred hccccHHHHHHHhhhhcCCCccccccchhhhc
Confidence 654332221 12345555555555543
No 431
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.38 E-value=8.8e-08 Score=87.81 Aligned_cols=223 Identities=17% Similarity=0.200 Sum_probs=107.0
Q ss_pred hhCCCCCCEEecccCcCccccccc----ccCCCCCCEeecccccCc---ccCC-------cCccCCCCCCEEEeecccCc
Q 042887 182 IANFSALEAIDISANMLGGRIPDS----LCQLRSLNYLSISENNFS---CKLP-------LSIWNISSLEIISLHSNRFE 247 (628)
Q Consensus 182 ~~~l~~L~~L~Ls~n~l~~~~~~~----~~~l~~L~~L~Ls~N~i~---~~~p-------~~~~~l~~L~~L~L~~n~l~ 247 (628)
+..+..+..+|||+|.|......+ +.+-.+|+..+++.--.. +.++ .++.++++|+..+||.|.+.
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg 105 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFG 105 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccC
Confidence 445677777777777776544333 334456666665543211 1111 22334444555555555444
Q ss_pred ccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeeccccc-------------ccCCCCCEEEc
Q 042887 248 GSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDF-------------NRLSNLSRLFL 314 (628)
Q Consensus 248 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~-------------~~l~~L~~L~L 314 (628)
...|..+. +.++.-+.|++|.+++|.+.-+....+ ..-|.|+....
T Consensus 106 ~~~~e~L~---------------------d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vic 164 (388)
T COG5238 106 SEFPEELG---------------------DLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVIC 164 (388)
T ss_pred cccchHHH---------------------HHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEe
Confidence 33333222 223455666666666665542222211 12355666666
Q ss_pred cCCcCCCcCCCCccccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeeeec
Q 042887 315 SKNNLGTESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFGVE 394 (628)
Q Consensus 315 ~~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~ 394 (628)
..|++...+...+ ...+..-..|+.+.+.+|.|.......+. -..+..+.+|+.||+.
T Consensus 165 grNRlengs~~~~--a~~l~sh~~lk~vki~qNgIrpegv~~L~--------------------~~gl~y~~~LevLDlq 222 (388)
T COG5238 165 GRNRLENGSKELS--AALLESHENLKEVKIQQNGIRPEGVTMLA--------------------FLGLFYSHSLEVLDLQ 222 (388)
T ss_pred ccchhccCcHHHH--HHHHHhhcCceeEEeeecCcCcchhHHHH--------------------HHHHHHhCcceeeecc
Confidence 6666544332211 11122223445555555544322111111 1123445566666666
Q ss_pred ccccccc----CCcCCCCCCCCCeEecccCccccccCccc----c--CCCCCCeEecCCcccc
Q 042887 395 YNQLTGT----IPHAIGELKNLQGLALVRNSLRGTIPDTL----G--NLTLLNRLFLGFNNLQ 447 (628)
Q Consensus 395 ~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~----~--~l~~L~~L~L~~N~l~ 447 (628)
.|-++-. ...+++.++.|+.|.+.+|-++.....++ . ..++|..|-..+|.+.
T Consensus 223 DNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~ 285 (388)
T COG5238 223 DNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERR 285 (388)
T ss_pred ccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhc
Confidence 6655421 22345666677777777776664333222 1 2356666666666654
No 432
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.36 E-value=2.7e-07 Score=85.83 Aligned_cols=185 Identities=16% Similarity=0.179 Sum_probs=100.7
Q ss_pred CcccEEEccCCcccccc-chhhh-CCCCCCEEecccCcCcc--cccccccCCCCCCEeecccccCcccCCcCccCCCCCC
Q 042887 162 LKLEMIDVGDNQLIGKF-PDFIA-NFSALEAIDISANMLGG--RIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLE 237 (628)
Q Consensus 162 ~~L~~L~Ls~n~l~~~~-~~~~~-~l~~L~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~ 237 (628)
+.++.|-+.+..|-..- ...|+ ..+.++++||..|.|+. .+...+.+++.|++|+|+.|.+...+...-..+.+|+
T Consensus 45 ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~ 124 (418)
T KOG2982|consen 45 RALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLR 124 (418)
T ss_pred cchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceE
Confidence 34445555555443221 12232 45778888888888762 1222346788888888888887743322224667888
Q ss_pred EEEeecccCcccCChhhhhCCCCCcEEecccCcccccc--cccccCC-CCCCEEEcccccceee--cccccccCCCCCEE
Q 042887 238 IISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSL--PHSFSNA-SNLQVLDVYKNHFSGQ--VKIDFNRLSNLSRL 312 (628)
Q Consensus 238 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l-~~L~~L~L~~N~i~~~--~~~~~~~l~~L~~L 312 (628)
+|-|.+..+...--......+|.++.|.+|.|.+.... ....... +.+++|....|...-- ....-..++++..+
T Consensus 125 ~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv 204 (418)
T KOG2982|consen 125 VLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSV 204 (418)
T ss_pred EEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchhe
Confidence 88888887765444444556777788888877544211 1111111 2444444444422100 00011224677777
Q ss_pred EccCCcCCCcCCCCccccccccCCCCCceeecccCCccc
Q 042887 313 FLSKNNLGTESTSDLDFLTLLTNCSQMEMLYLNTNKFGG 351 (628)
Q Consensus 313 ~L~~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~ 351 (628)
.+..|.+.+.... .....++.+..|+|+.|++..
T Consensus 205 ~v~e~PlK~~s~e-----k~se~~p~~~~LnL~~~~ids 238 (418)
T KOG2982|consen 205 FVCEGPLKTESSE-----KGSEPFPSLSCLNLGANNIDS 238 (418)
T ss_pred eeecCcccchhhc-----ccCCCCCcchhhhhccccccc
Confidence 7777777654332 223334455566666666643
No 433
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.35 E-value=5.5e-07 Score=98.18 Aligned_cols=99 Identities=23% Similarity=0.403 Sum_probs=81.8
Q ss_pred HHHHHhCCCCcCceeecCCceeEEEEEECC-------CCcEEEEEEeecc-ccchhhhHHHHHHHHhhcC-CCCcccccc
Q 042887 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGE-------TGTTVAVKVMNLK-QKGAAKSFVTECEALSNVR-HRNLIKIIT 112 (628)
Q Consensus 42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~-------~~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~-h~nIv~l~~ 112 (628)
.++...++..+.+.+|+|+||.||+|.... ....||||..+.. ...+.+.+.+|+++|+.+. |+||+.+++
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 456666677777899999999999998431 1346999998754 3346678999999999994 999999999
Q ss_pred eeeeccccccceeeeeecccccCCchhhhhccc
Q 042887 113 VCSSIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 113 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
+|+. ....++|+|||..|+|.+|++..+
T Consensus 370 ~~t~-----~~~~~~v~Ey~~~G~L~~~Lr~~r 397 (609)
T KOG0200|consen 370 ACTQ-----DGPLYVIVEYAEHGDLLEFLRKKR 397 (609)
T ss_pred eecc-----CCceEEEEEeccCCcHHHHHHhcc
Confidence 9875 678899999999999999998777
No 434
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.35 E-value=1.2e-07 Score=88.04 Aligned_cols=112 Identities=17% Similarity=0.199 Sum_probs=54.0
Q ss_pred ccCCCCCCEeecccccCcccCC-cCcc-CCCCCCEEEeecccCcccC-ChhhhhCCCCCcEEecccCcccccccccccCC
Q 042887 206 LCQLRSLNYLSISENNFSCKLP-LSIW-NISSLEIISLHSNRFEGSL-PLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNA 282 (628)
Q Consensus 206 ~~~l~~L~~L~Ls~N~i~~~~p-~~~~-~l~~L~~L~L~~n~l~~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 282 (628)
+..+.-++.|.+.++.|..+.. ..|+ ..+.+++|||.+|.|++-- -..+...+|.|++|+++.|++...+-..-..+
T Consensus 41 v~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~ 120 (418)
T KOG2982|consen 41 VSSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPL 120 (418)
T ss_pred eccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccc
Confidence 3344445556665555542221 1122 3456677777777765200 01122346666666666666653322211345
Q ss_pred CCCCEEEcccccceeecc-cccccCCCCCEEEccCC
Q 042887 283 SNLQVLDVYKNHFSGQVK-IDFNRLSNLSRLFLSKN 317 (628)
Q Consensus 283 ~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~n 317 (628)
.+|+.|-|.+..+.-... ..+..+|.+++|+++.|
T Consensus 121 ~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N 156 (418)
T KOG2982|consen 121 KNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDN 156 (418)
T ss_pred cceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccc
Confidence 566666666655432211 12334555555555555
No 435
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.35 E-value=1.6e-08 Score=93.76 Aligned_cols=181 Identities=15% Similarity=0.144 Sum_probs=126.5
Q ss_pred CcccEEEccCCccccc-cchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeeccccc-CcccCC-cCccCCCCCCE
Q 042887 162 LKLEMIDVGDNQLIGK-FPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENN-FSCKLP-LSIWNISSLEI 238 (628)
Q Consensus 162 ~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~-i~~~~p-~~~~~l~~L~~ 238 (628)
++|+.||||+..|+.. ....+..+++|+.|.|.++++.+.+...++.-.+|+.|+|+.+. ++.... --+.+++.|..
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 4699999999998743 33456789999999999999998888899999999999999864 442211 22578999999
Q ss_pred EEeecccCcccCCh-hhhhCCCCCcEEecccCccc---ccccccccCCCCCCEEEccccc-ceeecccccccCCCCCEEE
Q 042887 239 ISLHSNRFEGSLPL-NIGFNIPNVNFLSVGQNNFT---GSLPHSFSNASNLQVLDVYKNH-FSGQVKIDFNRLSNLSRLF 313 (628)
Q Consensus 239 L~L~~n~l~~~~~~-~~~~~l~~L~~L~L~~N~l~---~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~ 313 (628)
|+|+.|.+....-. .+..--++|+.|+|++..=. ..+.--...+++|.+|||++|. ++......|.+++.|++|.
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lS 344 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLS 344 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeee
Confidence 99999988643321 22223578888999886422 1222234578899999999874 4433444567788899999
Q ss_pred ccCCcCCCcCCCCccccccccCCCCCceeecccC
Q 042887 314 LSKNNLGTESTSDLDFLTLLTNCSQMEMLYLNTN 347 (628)
Q Consensus 314 L~~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n 347 (628)
++.|.. +.++ .+-.+...++|.+|++.+.
T Consensus 345 lsRCY~--i~p~---~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 345 LSRCYD--IIPE---TLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhhcC--CChH---HeeeeccCcceEEEEeccc
Confidence 888853 2322 2223455667777776554
No 436
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=98.34 E-value=1.3e-06 Score=88.60 Aligned_cols=93 Identities=23% Similarity=0.272 Sum_probs=72.4
Q ss_pred CCCcCceeecCCceeEEEEEECCC--CcEEEEEEeecc--ccchhhhHHHHHHHHhhc-CCCCcccccceeeeccccccc
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGET--GTTVAVKVMNLK--QKGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~--~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~ 123 (628)
+|++.+.||+|+||.||+|.+..+ ++.||+|.+... .....+.+.+|+++++++ .||||+++++.+... .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVF-PGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeec-cccCC
Confidence 478889999999999999999877 889999998643 222346688999999999 499999998875431 12335
Q ss_pred eeeeeecccccCCchhhhhc
Q 042887 124 FKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~ 143 (628)
..|+++||+. ++|.+++..
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~ 98 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRS 98 (332)
T ss_pred cEEEEEeccc-CCHHHHHhc
Confidence 6788999886 578887754
No 437
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.30 E-value=5.3e-08 Score=79.90 Aligned_cols=109 Identities=16% Similarity=0.302 Sum_probs=76.1
Q ss_pred CcccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEEEe
Q 042887 162 LKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISL 241 (628)
Q Consensus 162 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L 241 (628)
.+|+..+|++|.+....+..-..++.++.|+|++|.|+ .+|..+..++.|+.|+++.|.+. ..|..+..|.+|-.|+.
T Consensus 53 ~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds 130 (177)
T KOG4579|consen 53 YELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDS 130 (177)
T ss_pred ceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcC
Confidence 45777888888887554444456668888888888887 66777888888888888888887 57777777888888888
Q ss_pred ecccCcccCChhhhhCCCCCcEEecccCccccc
Q 042887 242 HSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGS 274 (628)
Q Consensus 242 ~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 274 (628)
.+|.+. .+|.+.+. -.+.-..++.++.+.+.
T Consensus 131 ~~na~~-eid~dl~~-s~~~al~~lgnepl~~~ 161 (177)
T KOG4579|consen 131 PENARA-EIDVDLFY-SSLPALIKLGNEPLGDE 161 (177)
T ss_pred CCCccc-cCcHHHhc-cccHHHHHhcCCccccc
Confidence 888887 77777552 22222233444444433
No 438
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.29 E-value=2.3e-06 Score=80.07 Aligned_cols=84 Identities=29% Similarity=0.530 Sum_probs=72.2
Q ss_pred eecCCceeEEEEEECCCCcEEEEEEeeccccc-hhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeeccccc
Q 042887 56 IGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG-AAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKC 134 (628)
Q Consensus 56 iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~ 134 (628)
||+|++|.||++....+++.+++|+....... ..+.+.+|+..++.++|++|+++++.+. .....++++|++.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE-----DENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeee-----cCCeEEEEEecCCC
Confidence 68999999999999877999999998765432 3467899999999999999999999854 35789999999999
Q ss_pred CCchhhhhcc
Q 042887 135 GSSEDWMHQS 144 (628)
Q Consensus 135 g~L~~~l~~~ 144 (628)
+++.+++...
T Consensus 76 ~~l~~~~~~~ 85 (215)
T cd00180 76 GSLKDLLKEN 85 (215)
T ss_pred CcHHHHHHhc
Confidence 9999998754
No 439
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.26 E-value=7.7e-07 Score=95.31 Aligned_cols=92 Identities=20% Similarity=0.207 Sum_probs=65.9
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCC-cEEEEEEee--------------c---cccchhhhHHHHHHHHhhcCCCCc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETG-TTVAVKVMN--------------L---KQKGAAKSFVTECEALSNVRHRNL 107 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~-~~~avK~~~--------------~---~~~~~~~~~~~E~~~l~~l~h~nI 107 (628)
..++|++.+.||+|+||.||+|..+... ..++.|.+. + ........+.+|+.+|++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3578999999999999999998764332 222222111 0 011234568899999999999999
Q ss_pred ccccceeeeccccccceeeeeecccccCCchhhhhc
Q 042887 108 IKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 108 v~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 143 (628)
|++++++. ..+..|+++|++. +++.+++..
T Consensus 226 v~l~~~~~-----~~~~~~lv~e~~~-~~l~~~l~~ 255 (501)
T PHA03210 226 LKIEEILR-----SEANTYMITQKYD-FDLYSFMYD 255 (501)
T ss_pred CcEeEEEE-----ECCeeEEEEeccc-cCHHHHHhh
Confidence 99999854 4678899999986 467766643
No 440
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.26 E-value=5e-07 Score=91.05 Aligned_cols=95 Identities=14% Similarity=0.181 Sum_probs=77.1
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeec--cccchhhhHHHHHHHHhhcC-CCCcccccceeeeccccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL--KQKGAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~--~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~ 123 (628)
-..|++.+.||+||-++||++... +.+.||+|.+.. .+.+....|.+|+..|.+++ |-+||+++++... ++
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-----d~ 433 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-----DG 433 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-----Cc
Confidence 456999999999999999999984 456677776643 24566788999999999996 9999999999653 88
Q ss_pred eeeeeecccccCCchhhhhcccccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSNDKL 148 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~ 148 (628)
+.||||||.+ -||..++.+.....
T Consensus 434 ~lYmvmE~Gd-~DL~kiL~k~~~~~ 457 (677)
T KOG0596|consen 434 YLYMVMECGD-IDLNKILKKKKSID 457 (677)
T ss_pred eEEEEeeccc-ccHHHHHHhccCCC
Confidence 9999999876 48888887766444
No 441
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.24 E-value=2.8e-06 Score=78.37 Aligned_cols=79 Identities=18% Similarity=0.196 Sum_probs=57.6
Q ss_pred CceeecCCceeEEEEEECCCCcEEEEEEeeccccc--h------------------------hhhHHHHHHHHhhcCCCC
Q 042887 53 SNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKG--A------------------------AKSFVTECEALSNVRHRN 106 (628)
Q Consensus 53 ~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~h~n 106 (628)
.+.||+|+||.||+|.+. +|+.||||+++..... . ...+.+|.+.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 478999999999999986 8999999999754210 0 112357889999999998
Q ss_pred cccccceeeeccccccceeeeeecccccCCchh
Q 042887 107 LIKIITVCSSIDFKGVDFKALIYEYMKCGSSED 139 (628)
Q Consensus 107 Iv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~ 139 (628)
|........ ...++||||++|+++..
T Consensus 81 i~~p~~~~~-------~~~~lVmE~~~g~~~~~ 106 (190)
T cd05145 81 VPVPEPILL-------KKNVLVMEFIGDDGSPA 106 (190)
T ss_pred CCCceEEEe-------cCCEEEEEEecCCCchh
Confidence 755444321 12489999999885543
No 442
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=98.22 E-value=2.5e-06 Score=82.04 Aligned_cols=76 Identities=13% Similarity=0.024 Sum_probs=62.1
Q ss_pred CCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeecccccCCch
Q 042887 59 GSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSE 138 (628)
Q Consensus 59 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~ 138 (628)
|.||.||++++..+++.||+|.+.... .+.+|...+....||||+++++.+. .....+++|||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIV-----SEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhhee-----cCCeEEEEEecCCCCCHH
Confidence 899999999999999999999987543 2334555555667999999999854 467899999999999999
Q ss_pred hhhhcc
Q 042887 139 DWMHQS 144 (628)
Q Consensus 139 ~~l~~~ 144 (628)
+++.+.
T Consensus 74 ~~l~~~ 79 (237)
T cd05576 74 SHISKF 79 (237)
T ss_pred HHHHHh
Confidence 988654
No 443
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=98.20 E-value=5e-07 Score=82.78 Aligned_cols=84 Identities=23% Similarity=0.264 Sum_probs=67.2
Q ss_pred CCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHH-HhhcCCCCcccccceeeeccccccceee
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEA-LSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
+.+-...||.|+||.|++-.++.+|+..|||.++... .....++..|.+. |+.-..||||++++++. .++.-|
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F-----~EGdcW 139 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALF-----SEGDCW 139 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhh-----cCCcee
Confidence 3444567999999999999999999999999997653 3456788899885 55557999999999964 367779
Q ss_pred eeecccccCCch
Q 042887 127 LIYEYMKCGSSE 138 (628)
Q Consensus 127 lv~e~~~~g~L~ 138 (628)
+.||.|.- ++.
T Consensus 140 iCMELMd~-SlD 150 (361)
T KOG1006|consen 140 ICMELMDI-SLD 150 (361)
T ss_pred eeHHHHhh-hHH
Confidence 99999974 443
No 444
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.19 E-value=8.4e-08 Score=89.16 Aligned_cols=182 Identities=19% Similarity=0.147 Sum_probs=93.7
Q ss_pred CCCEEEeecccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEccccc-ceeec-ccccccCCCCCEE
Q 042887 235 SLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNH-FSGQV-KIDFNRLSNLSRL 312 (628)
Q Consensus 235 ~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-i~~~~-~~~~~~l~~L~~L 312 (628)
.||+|||+...|+..--..+...+.+|+.|.+.++++.+.+...+++-.+|+.|+++.+. ++... .--+..++.|.+|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 466666666655522122223345666666777777666666667777777777777653 22111 1124566677777
Q ss_pred EccCCcCCCcCCCCccccccccCCCCCceeecccCCcccccchHHHhccccccEEEccCCcceeeCchhhhccCCcCeee
Q 042887 313 FLSKNNLGTESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKITVIGMGDNQISGTIPSEIKNLVNINAFG 392 (628)
Q Consensus 313 ~L~~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 392 (628)
+++++.+...... .....+ -++|..|++++..-. +..+ .+..-...+++|..||
T Consensus 266 NlsWc~l~~~~Vt--v~V~hi--se~l~~LNlsG~rrn------------------l~~s----h~~tL~~rcp~l~~LD 319 (419)
T KOG2120|consen 266 NLSWCFLFTEKVT--VAVAHI--SETLTQLNLSGYRRN------------------LQKS----HLSTLVRRCPNLVHLD 319 (419)
T ss_pred CchHhhccchhhh--HHHhhh--chhhhhhhhhhhHhh------------------hhhh----HHHHHHHhCCceeeec
Confidence 7777665442111 000001 124444444443210 0000 0111234566677777
Q ss_pred ecccc-ccccCCcCCCCCCCCCeEecccCccccccCcc---ccCCCCCCeEecCCc
Q 042887 393 VEYNQ-LTGTIPHAIGELKNLQGLALVRNSLRGTIPDT---LGNLTLLNRLFLGFN 444 (628)
Q Consensus 393 l~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~---~~~l~~L~~L~L~~N 444 (628)
++.|. ++......|..++.|++|.++.|.. .+|.. +...|+|.+|+..++
T Consensus 320 LSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 320 LSDSVMLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred cccccccCchHHHHHHhcchheeeehhhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 76653 2322233456677788888877754 34443 455677888877654
No 445
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.18 E-value=8.2e-06 Score=88.17 Aligned_cols=89 Identities=17% Similarity=0.197 Sum_probs=64.8
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEee-cc-c------cchhhhHHHHHHHHhhcCCCCcccccceeeecc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMN-LK-Q------KGAAKSFVTECEALSNVRHRNLIKIITVCSSID 118 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~-~~-~------~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 118 (628)
...|...+.||+|+||.||+|.+. ++.+++|... +. . ....+++.+|+++++.++|++++.....+..
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-- 407 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD-- 407 (535)
T ss_pred ccccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe--
Confidence 445567889999999999999984 3344444322 11 1 1123568899999999999998876655432
Q ss_pred ccccceeeeeecccccCCchhhhh
Q 042887 119 FKGVDFKALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~ 142 (628)
....++||||++++++.+++.
T Consensus 408 ---~~~~~lv~E~~~g~~L~~~l~ 428 (535)
T PRK09605 408 ---PEEKTIVMEYIGGKDLKDVLE 428 (535)
T ss_pred ---CCCCEEEEEecCCCcHHHHHH
Confidence 446789999999999998875
No 446
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.13 E-value=7.3e-06 Score=78.70 Aligned_cols=80 Identities=28% Similarity=0.429 Sum_probs=68.9
Q ss_pred CceeEEEEEECCCCcEEEEEEeeccccch-hhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeeeecccccCCch
Q 042887 60 SFGFVYKGKLGETGTTVAVKVMNLKQKGA-AKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSE 138 (628)
Q Consensus 60 ~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~ 138 (628)
+||.||+|.+..+|+.+|+|+........ .+.+.+|++.+++++|+||+++++.+.. ....++++||++++++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-----EDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-----CCEEEEEEeCCCCCCHH
Confidence 58999999998889999999997654433 6789999999999999999999998653 57889999999999999
Q ss_pred hhhhcc
Q 042887 139 DWMHQS 144 (628)
Q Consensus 139 ~~l~~~ 144 (628)
+++...
T Consensus 76 ~~~~~~ 81 (244)
T smart00220 76 DLLKKR 81 (244)
T ss_pred HHHHhc
Confidence 988654
No 447
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.12 E-value=6.3e-06 Score=77.60 Aligned_cols=83 Identities=16% Similarity=0.189 Sum_probs=64.0
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeecccc--------chhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK--------GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
+.||+|++|.||+|.+ .|..+++|....... .....+.+|++++..+.|++|.....++.. ....
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-----~~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD-----PENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe-----CCCC
Confidence 5799999999999998 677899997643221 122457889999999999988766555432 4567
Q ss_pred eeeecccccCCchhhhhc
Q 042887 126 ALIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~ 143 (628)
+++|||++|+++.+++..
T Consensus 75 ~lv~e~~~G~~L~~~~~~ 92 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINS 92 (211)
T ss_pred EEEEEEeCCcCHHHHHHh
Confidence 899999999999988754
No 448
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.09 E-value=7.2e-06 Score=72.38 Aligned_cols=59 Identities=25% Similarity=0.281 Sum_probs=28.1
Q ss_pred CCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEEEeecccCc
Q 042887 187 ALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFE 247 (628)
Q Consensus 187 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~ 247 (628)
+...+||++|.+. .-+.|..++.|.+|.|++|.|+.+.|.--.-+++|+.|.|.+|+|.
T Consensus 43 ~~d~iDLtdNdl~--~l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~ 101 (233)
T KOG1644|consen 43 QFDAIDLTDNDLR--KLDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQ 101 (233)
T ss_pred ccceecccccchh--hcccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchh
Confidence 4445555555543 1223455555555555555555444433333444555555554443
No 449
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.08 E-value=7.6e-06 Score=76.23 Aligned_cols=82 Identities=20% Similarity=0.282 Sum_probs=60.4
Q ss_pred eeecCCceeEEEEEECCCCcEEEEEEeeccc-c-------chhhhHHHHHHHHhhcCCCCcccccceeeeccccccceee
Q 042887 55 MIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-K-------GAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 55 ~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~-------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
.||+|+||.||+|.+ +|+.+++|...... . ...+++.+|++++..+.|+++......+. .....+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDV-----DPDNKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-----ECCCCE
Confidence 389999999999996 67889999864321 1 12356788999999998877554433322 245568
Q ss_pred eeecccccCCchhhhhc
Q 042887 127 LIYEYMKCGSSEDWMHQ 143 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~ 143 (628)
++|||++|+++.+.+..
T Consensus 74 lv~e~~~g~~l~~~~~~ 90 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEE 90 (199)
T ss_pred EEEEEECCccHHHHHhh
Confidence 99999999999887754
No 450
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.03 E-value=8.2e-06 Score=72.05 Aligned_cols=106 Identities=15% Similarity=0.238 Sum_probs=65.3
Q ss_pred CCCCEeecccccCcccCCcCccCCCCCCEEEeecccCcccCChhhhhCCCCCcEEecccCcccccc-cccccCCCCCCEE
Q 042887 210 RSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSL-PHSFSNASNLQVL 288 (628)
Q Consensus 210 ~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L 288 (628)
.+...+||++|.+. --+.|..++.|.+|.|.+|.|+ .|...+...+++|+.|.|.+|.|.... -..++.++.|++|
T Consensus 42 d~~d~iDLtdNdl~--~l~~lp~l~rL~tLll~nNrIt-~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~L 118 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLR--KLDNLPHLPRLHTLLLNNNRIT-RIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYL 118 (233)
T ss_pred cccceecccccchh--hcccCCCccccceEEecCCcce-eeccchhhhccccceEEecCcchhhhhhcchhccCCcccee
Confidence 34566777777765 2334666777777777777776 666666555677777777777666321 1235566777777
Q ss_pred Ecccccceeec---ccccccCCCCCEEEccCCc
Q 042887 289 DVYKNHFSGQV---KIDFNRLSNLSRLFLSKNN 318 (628)
Q Consensus 289 ~L~~N~i~~~~---~~~~~~l~~L~~L~L~~n~ 318 (628)
.+-+|.++... .-.+..+++|+.||...-.
T Consensus 119 tll~Npv~~k~~YR~yvl~klp~l~~LDF~kVt 151 (233)
T KOG1644|consen 119 TLLGNPVEHKKNYRLYVLYKLPSLRTLDFQKVT 151 (233)
T ss_pred eecCCchhcccCceeEEEEecCcceEeehhhhh
Confidence 77777664321 1234567777777776543
No 451
>smart00090 RIO RIO-like kinase.
Probab=98.03 E-value=1e-05 Score=77.17 Aligned_cols=87 Identities=14% Similarity=0.080 Sum_probs=61.6
Q ss_pred CCCCcCceeecCCceeEEEEE-ECCCCcEEEEEEeeccccc------------------------hhhhHHHHHHHHhhc
Q 042887 48 NNFSASNMIGQGSFGFVYKGK-LGETGTTVAVKVMNLKQKG------------------------AAKSFVTECEALSNV 102 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~-~~~~~~~~avK~~~~~~~~------------------------~~~~~~~E~~~l~~l 102 (628)
..|++.+.||+|+||.||+|. +..+|+.||+|+++..... ....+.+|+..+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 358899999999999999999 6678999999998753210 012356899999999
Q ss_pred CCCCcccccceeeeccccccceeeeeecccccCCchhhh
Q 042887 103 RHRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWM 141 (628)
Q Consensus 103 ~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l 141 (628)
.+.. +.+..... ....++||||++++++....
T Consensus 108 ~~~~-i~~p~~~~------~~~~~lV~E~~~g~~L~~~~ 139 (237)
T smart00090 108 YEAG-VPVPKPIA------WRRNVLVMEFIGGDGLPAPR 139 (237)
T ss_pred HhcC-CCCCeeeE------ecCceEEEEEecCCcccccc
Confidence 7532 22222211 12358999999998876554
No 452
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.02 E-value=1.3e-05 Score=68.66 Aligned_cols=123 Identities=22% Similarity=0.238 Sum_probs=43.7
Q ss_pred hhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCCCEEEeecccCcccCChhhhhCCC
Q 042887 180 DFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIP 259 (628)
Q Consensus 180 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~ 259 (628)
.+|.++++|+.+.+.. .+..+...+|..+++|+.+.+.++ +......+|.++++|+.+.+.. .+. .++...+...+
T Consensus 6 ~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~-~i~~~~F~~~~ 81 (129)
T PF13306_consen 6 NAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLK-SIGDNAFSNCT 81 (129)
T ss_dssp TTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT--EE-TTTTTT-T
T ss_pred HHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccc-ccccccccccc
Confidence 3444555555555543 344444445555555555555443 4434444455554555555543 332 34444444445
Q ss_pred CCcEEecccCcccccccccccCCCCCCEEEcccccceeecccccccCCCC
Q 042887 260 NVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNL 309 (628)
Q Consensus 260 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 309 (628)
+|+.+++..+ +..+....|.+. +|+.+.+.. .+..+....|.++++|
T Consensus 82 ~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 82 NLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp TECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred cccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 5555555443 333344445444 555555443 3333344444444443
No 453
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.01 E-value=3.6e-06 Score=56.02 Aligned_cols=16 Identities=31% Similarity=0.567 Sum_probs=5.9
Q ss_pred cCCCCCCEEECCCCcc
Q 042887 531 KTLKSIKELDLSRNNL 546 (628)
Q Consensus 531 ~~l~~L~~L~Ls~N~l 546 (628)
+++++|+.|++++|+|
T Consensus 21 ~~l~~L~~L~l~~N~i 36 (44)
T PF12799_consen 21 SNLPNLETLNLSNNPI 36 (44)
T ss_dssp TTCTTSSEEEETSSCC
T ss_pred hCCCCCCEEEecCCCC
Confidence 3333333333333333
No 454
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.99 E-value=9.6e-07 Score=81.05 Aligned_cols=94 Identities=21% Similarity=0.301 Sum_probs=72.3
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeecccccccee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.+.+..+.||-|+||+||.+.++.+|+.||.|.+... .-...+++.+|+.++...+|.||+..++.-...........
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 4566778999999999999999999999999988643 23455789999999999999999999888544222233456
Q ss_pred eeeecccccCCchhhhh
Q 042887 126 ALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~ 142 (628)
|.++|.+. .||+..|-
T Consensus 133 YV~TELmQ-SDLHKIIV 148 (449)
T KOG0664|consen 133 YVLTELMQ-SDLHKIIV 148 (449)
T ss_pred HHHHHHHH-hhhhheec
Confidence 77778775 36665553
No 455
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=97.97 E-value=9.4e-07 Score=88.10 Aligned_cols=95 Identities=16% Similarity=0.274 Sum_probs=79.9
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc---ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK---QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 123 (628)
..+++....+|-|+||.|=.+........+|+|++++. +....+.+..|-.+|.+.+.|.||++|.. |.+.+
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrT-----frd~k 493 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRT-----FRDSK 493 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHH-----hccch
Confidence 35667778899999999999888655556899998764 34455678899999999999999999998 56699
Q ss_pred eeeeeecccccCCchhhhhcccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSND 146 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~ 146 (628)
+.||.||-|-||++...+++++.
T Consensus 494 yvYmLmEaClGGElWTiLrdRg~ 516 (732)
T KOG0614|consen 494 YVYMLMEACLGGELWTILRDRGS 516 (732)
T ss_pred hhhhhHHhhcCchhhhhhhhcCC
Confidence 99999999999999999987763
No 456
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.95 E-value=2e-06 Score=93.62 Aligned_cols=200 Identities=20% Similarity=0.223 Sum_probs=114.4
Q ss_pred cccEEEccCCccccccchhhhCCCCCCEEecccCcCcccc-------------cccc--cCCCCCCEeecccccCcc-cC
Q 042887 163 KLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRI-------------PDSL--CQLRSLNYLSISENNFSC-KL 226 (628)
Q Consensus 163 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-------------~~~~--~~l~~L~~L~Ls~N~i~~-~~ 226 (628)
+++..++.+.......-+.+.... |++|.|.+-...... ...+ ..-.+|++||+++...-. .-
T Consensus 61 ~ltki~l~~~~~~~~~~~~l~~~~-L~sl~LGnl~~~k~~~~~~~~idi~~lL~~~Ln~~sr~nL~~LdI~G~~~~s~~W 139 (699)
T KOG3665|consen 61 NLTKIDLKNVTLQHQTLEMLRKQD-LESLKLGNLDKIKQDYLDDATIDIISLLKDLLNEESRQNLQHLDISGSELFSNGW 139 (699)
T ss_pred eeEEeeccceecchhHHHHHhhcc-ccccCCcchHhhhhhhhhhhhccHHHHHHHHHhHHHHHhhhhcCccccchhhccH
Confidence 466666666666544444444444 677766643221100 0000 112578888887765321 11
Q ss_pred CcCcc-CCCCCCEEEeecccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEccccccee-ecccccc
Q 042887 227 PLSIW-NISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSG-QVKIDFN 304 (628)
Q Consensus 227 p~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~ 304 (628)
|..++ .+|+|+.|.+++=.+...=-..++.++|+|..||+|+.+++.. ..++.+++|+.|.+.+=.+.. ..-..+.
T Consensus 140 ~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF 217 (699)
T KOG3665|consen 140 PKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLF 217 (699)
T ss_pred HHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHh
Confidence 22232 4788888888876664221234455688888888888888754 567788888888887766543 1223456
Q ss_pred cCCCCCEEEccCCcCCCcCCCCccccccccCCCCCceeecccCCcccccchHHHhcccccc
Q 042887 305 RLSNLSRLFLSKNNLGTESTSDLDFLTLLTNCSQMEMLYLNTNKFGGVFLRSIANLSAKIT 365 (628)
Q Consensus 305 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~ 365 (628)
.+++|+.||+|.........-.-.+...-..+|+|+.||.++..+.......+-...++|+
T Consensus 218 ~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~ 278 (699)
T KOG3665|consen 218 NLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQ 278 (699)
T ss_pred cccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHh
Confidence 6888888888877654432111112223344677778887777776655555544333333
No 457
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.95 E-value=9.7e-06 Score=53.94 Aligned_cols=36 Identities=36% Similarity=0.541 Sum_probs=16.3
Q ss_pred CCcEEecccCcccccccccccCCCCCCEEEcccccce
Q 042887 260 NVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFS 296 (628)
Q Consensus 260 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 296 (628)
+|++|++++|+|+. +|..++++++|+.|++++|+|+
T Consensus 2 ~L~~L~l~~N~i~~-l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQITD-LPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-SS-HGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCcc-cCchHhCCCCCCEEEecCCCCC
Confidence 34444444444442 2333455555555555555544
No 458
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.94 E-value=3.5e-06 Score=83.85 Aligned_cols=119 Identities=17% Similarity=0.219 Sum_probs=83.1
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcC-----C---CCcccccceeeecc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVR-----H---RNLIKIITVCSSID 118 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~nIv~l~~~~~~~~ 118 (628)
...|.+.+.+|.|.|++||+|.+..+.++||+|+++.. ....+....||.+|++++ | .+||++++.+.-.
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs- 154 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS- 154 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec-
Confidence 36788899999999999999999999999999998754 334567789999999884 2 4799999986531
Q ss_pred ccccceeeeeecccccCCchhhhhccc-cccccccCCccccCCcCcccEEE
Q 042887 119 FKGVDFKALIYEYMKCGSSEDWMHQSN-DKLEAGNLGLIQRLNLLKLEMID 168 (628)
Q Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~~l~~L~~L~ 168 (628)
-.....++||+|+.- -.|..+|.... ..++...+-.++..-|..|.+|+
T Consensus 155 GpNG~HVCMVfEvLG-dnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH 204 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVLG-DNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLH 204 (590)
T ss_pred CCCCcEEEEEehhhh-hHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 234578899999863 35666766544 33333333334443334444433
No 459
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.92 E-value=3.3e-05 Score=77.60 Aligned_cols=134 Identities=18% Similarity=0.302 Sum_probs=61.1
Q ss_pred hccCCcCeeeeccccccccCCcCCCCCCCCCeEecccCccccccCccccCCCCCCeEecCCc-ccccccCCcccCCcchh
Q 042887 383 KNLVNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRNSLRGTIPDTLGNLTLLNRLFLGFN-NLQGNVPSSLGNCQNLM 461 (628)
Q Consensus 383 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~ 461 (628)
..+.+++.|++++|.++ .+|. -..+|++|.++++.--...|..+ .++|++|++++| .+. ..|.. |
T Consensus 49 ~~~~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~-sLP~s------L- 114 (426)
T PRK15386 49 EEARASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEIS-GLPES------V- 114 (426)
T ss_pred HHhcCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccc-ccccc------c-
Confidence 33455566666666555 2231 12346666666533222444433 245666666665 333 23322 2
Q ss_pred cccceEEcCCCcCcc--ccchhhhccCCCCEeeCcCCc-Ccc-cCCccccCCCCCCeEECcCceeeeecCccccCCCCCC
Q 042887 462 TLSRLLDLSGNLLGG--SIPLEVGNLRNLAEFDLSENH-FSN-EIPVTLSACTTLEYLHLQGNSFSGSLPLSLKTLKSIK 537 (628)
Q Consensus 462 ~l~~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~-l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 537 (628)
+.|+++++.... .+| ++|+.|.+.+++ ... ..|..+ .++|++|++++|... ..|..+. .+|+
T Consensus 115 ---e~L~L~~n~~~~L~~LP------ssLk~L~I~~~n~~~~~~lp~~L--PsSLk~L~Is~c~~i-~LP~~LP--~SLk 180 (426)
T PRK15386 115 ---RSLEIKGSATDSIKNVP------NGLTSLSINSYNPENQARIDNLI--SPSLKTLSLTGCSNI-ILPEKLP--ESLQ 180 (426)
T ss_pred ---ceEEeCCCCCcccccCc------chHhheecccccccccccccccc--CCcccEEEecCCCcc-cCccccc--ccCc
Confidence 445555544321 122 234555553322 110 011111 146677777666654 3343332 4666
Q ss_pred EEECCCC
Q 042887 538 ELDLSRN 544 (628)
Q Consensus 538 ~L~Ls~N 544 (628)
.|+++.|
T Consensus 181 ~L~ls~n 187 (426)
T PRK15386 181 SITLHIE 187 (426)
T ss_pred EEEeccc
Confidence 6666665
No 460
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=97.90 E-value=1.6e-05 Score=85.87 Aligned_cols=96 Identities=18% Similarity=0.260 Sum_probs=63.1
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCC----CcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcccccceeee-cccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGET----GTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIKIITVCSS-IDFK 120 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~----~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~ 120 (628)
..++|++.+.||+|+||.||+|.+..+ +..||+|.+..... .+.+..| .+....+.++..+...+.. ....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 457899999999999999999999888 89999998754321 1112222 1222223333333222111 0013
Q ss_pred ccceeeeeecccccCCchhhhhccc
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
.....++|+||+.+++|.+++....
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~ 230 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKE 230 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcC
Confidence 4678899999999999999987543
No 461
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=97.88 E-value=3.3e-05 Score=71.78 Aligned_cols=84 Identities=24% Similarity=0.148 Sum_probs=60.6
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc----------------------chhhhHHHHHHHHhhcCCC
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK----------------------GAAKSFVTECEALSNVRHR 105 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----------------------~~~~~~~~E~~~l~~l~h~ 105 (628)
..|.+.+.||+|+||.||+|... +|+.||||++..... .....+.+|..++..+.|+
T Consensus 15 ~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 93 (198)
T cd05144 15 VVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE 93 (198)
T ss_pred chhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc
Confidence 34888899999999999999884 799999998764320 0112356788888888777
Q ss_pred Cc--ccccceeeeccccccceeeeeecccccCCchhhh
Q 042887 106 NL--IKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWM 141 (628)
Q Consensus 106 nI--v~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l 141 (628)
++ ...++ ....+++|||++++++.+..
T Consensus 94 ~i~v~~~~~---------~~~~~lv~e~~~g~~L~~~~ 122 (198)
T cd05144 94 GFPVPKPID---------WNRHAVVMEYIDGVELYRVR 122 (198)
T ss_pred CCCCCceee---------cCCceEEEEEeCCcchhhcc
Confidence 43 33322 23458999999998886543
No 462
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=97.86 E-value=1.1e-05 Score=79.17 Aligned_cols=93 Identities=27% Similarity=0.378 Sum_probs=78.8
Q ss_pred HHHHhCCCCcCceeecCCceeEEEEEECC---CCcEEEEEEeeccccchhhhHHHHHHHHhhcC-CCCcccccceeeecc
Q 042887 43 LSKATNNFSASNMIGQGSFGFVYKGKLGE---TGTTVAVKVMNLKQKGAAKSFVTECEALSNVR-HRNLIKIITVCSSID 118 (628)
Q Consensus 43 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~ 118 (628)
.....+.|...+.||+|.|+.||+|.+.. ..+.||+|.+...+. ..++.+|+++|..+. +.||+++.++
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~----- 103 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGC----- 103 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhh-----
Confidence 44556789999999999999999999877 678999999976543 467899999999995 8999999998
Q ss_pred ccccceeeeeecccccCCchhhhh
Q 042887 119 FKGVDFKALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~ 142 (628)
+...+...+|+||.+.-+..++..
T Consensus 104 ~rnnd~v~ivlp~~~H~~f~~l~~ 127 (418)
T KOG1167|consen 104 FRNNDQVAIVLPYFEHDRFRDLYR 127 (418)
T ss_pred hccCCeeEEEecccCccCHHHHHh
Confidence 667899999999999877776654
No 463
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.84 E-value=3.7e-05 Score=65.91 Aligned_cols=124 Identities=19% Similarity=0.206 Sum_probs=76.3
Q ss_pred cccCCcCcccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCC
Q 042887 156 IQRLNLLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISS 235 (628)
Q Consensus 156 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~ 235 (628)
..+.+.++|+.+.+.. .+..+...+|.++++|+.+.+..+ +..+...+|.++++|+.+.+.+ .+.......|..+++
T Consensus 6 ~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~ 82 (129)
T PF13306_consen 6 NAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTN 82 (129)
T ss_dssp TTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TT
T ss_pred HHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccc
Confidence 3456777899999885 677777888999999999999885 7767778899998999999976 555466778888999
Q ss_pred CCEEEeecccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCC
Q 042887 236 LEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQ 286 (628)
Q Consensus 236 L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 286 (628)
|+.+++..+ +. .++...+... +|+.+.+.. .++.+....|.++++|+
T Consensus 83 l~~i~~~~~-~~-~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l~ 129 (129)
T PF13306_consen 83 LKNIDIPSN-IT-EIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKLK 129 (129)
T ss_dssp ECEEEETTT--B-EEHTTTTTT--T--EEE-TT-B-SS----GGG------
T ss_pred ccccccCcc-cc-EEchhhhcCC-CceEEEECC-CccEECCccccccccCC
Confidence 999999876 65 7778888776 999999886 55556777888887774
No 464
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.80 E-value=8.4e-05 Score=74.71 Aligned_cols=137 Identities=15% Similarity=0.143 Sum_probs=80.4
Q ss_pred CCcCcccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccc-cCcccCCcCccCCCCCC
Q 042887 159 LNLLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISEN-NFSCKLPLSIWNISSLE 237 (628)
Q Consensus 159 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N-~i~~~~p~~~~~l~~L~ 237 (628)
..+.+++.|++++|.++. +|. --.+|++|.++++.--...|+.+. ++|++|++++| .+. .+| .+|+
T Consensus 49 ~~~~~l~~L~Is~c~L~s-LP~---LP~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~-sLP------~sLe 115 (426)
T PRK15386 49 EEARASGRLYIKDCDIES-LPV---LPNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEIS-GLP------ESVR 115 (426)
T ss_pred HHhcCCCEEEeCCCCCcc-cCC---CCCCCcEEEccCCCCcccCCchhh--hhhhheEccCccccc-ccc------cccc
Confidence 345678899999988774 452 224689999987443336666553 57889999888 554 445 3477
Q ss_pred EEEeecccCcccCChhhhhCCCCCcEEecccCccc-c-cccccccCCCCCCEEEcccccceeecccccccCCCCCEEEcc
Q 042887 238 IISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFT-G-SLPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLS 315 (628)
Q Consensus 238 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~-~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 315 (628)
.|+++.+... .++. -.++|+.|.+.+++.. . ..|..+ -++|++|++++|.... .|..+. .+|+.|.++
T Consensus 116 ~L~L~~n~~~-~L~~----LPssLk~L~I~~~n~~~~~~lp~~L--PsSLk~L~Is~c~~i~-LP~~LP--~SLk~L~ls 185 (426)
T PRK15386 116 SLEIKGSATD-SIKN----VPNGLTSLSINSYNPENQARIDNLI--SPSLKTLSLTGCSNII-LPEKLP--ESLQSITLH 185 (426)
T ss_pred eEEeCCCCCc-cccc----CcchHhheecccccccccccccccc--CCcccEEEecCCCccc-Cccccc--ccCcEEEec
Confidence 7777776643 2221 1235666766443211 0 111111 1568888888777542 233333 477778777
Q ss_pred CCc
Q 042887 316 KNN 318 (628)
Q Consensus 316 ~n~ 318 (628)
.+.
T Consensus 186 ~n~ 188 (426)
T PRK15386 186 IEQ 188 (426)
T ss_pred ccc
Confidence 653
No 465
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=97.77 E-value=1.2e-05 Score=77.78 Aligned_cols=92 Identities=23% Similarity=0.367 Sum_probs=72.6
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcC--CC----Ccccccceeeecccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVR--HR----NLIKIITVCSSIDFK 120 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~--h~----nIv~l~~~~~~~~~~ 120 (628)
..+|.+.+.+|+|.||+|..+.+.+++..||+|+++...+ ..++..-|+++++++. .| -+|++.++ |+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~w-----Fd 161 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDW-----FD 161 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehh-----hh
Confidence 6789999999999999999999999999999999976433 3456678999999994 23 24555555 56
Q ss_pred ccceeeeeecccccCCchhhhhccc
Q 042887 121 GVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
..+..++|+|.+ |-++.++++.++
T Consensus 162 yrghiCivfell-G~S~~dFlk~N~ 185 (415)
T KOG0671|consen 162 YRGHICIVFELL-GLSTFDFLKENN 185 (415)
T ss_pred ccCceEEEEecc-ChhHHHHhccCC
Confidence 688899999987 348889987644
No 466
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.75 E-value=1e-05 Score=76.85 Aligned_cols=99 Identities=18% Similarity=0.294 Sum_probs=75.9
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcC-CCCcccccceeeeccccccceee
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVDFKA 126 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~~~~ 126 (628)
-.|.+.+.||+|+||+.+.|...-++++||||.-...+ .+.+...|.+..+.+. .+.|.+++.+. .....-.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFG-----qeG~~Ni 100 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFG-----QEGKYNI 100 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeec-----cccchhh
Confidence 47999999999999999999999999999999876543 3456677777777664 68888887763 3466778
Q ss_pred eeecccccCCchhhhhccccccccccCC
Q 042887 127 LIYEYMKCGSSEDWMHQSNDKLEAGNLG 154 (628)
Q Consensus 127 lv~e~~~~g~L~~~l~~~~~~~~~~~~~ 154 (628)
||+|.. |-+|++.+.-.+.......+.
T Consensus 101 LVidLL-GPSLEDLFD~CgR~FSvKTV~ 127 (449)
T KOG1165|consen 101 LVIDLL-GPSLEDLFDLCGRRFSVKTVA 127 (449)
T ss_pred hhhhhh-CcCHHHHHHHhcCcccHHhHH
Confidence 899975 568888887766666544443
No 467
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.69 E-value=5.3e-05 Score=68.82 Aligned_cols=96 Identities=21% Similarity=0.306 Sum_probs=71.4
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCC-CCcccccceeeeccccccce
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRH-RNLIKIITVCSSIDFKGVDF 124 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~~~~ 124 (628)
...+|.+.+.||.|+||.+|.|....+|+.||||.-+... ...+...|..+..-+++ ..|..+..+ ..+...
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y-----~~e~~y 85 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHY-----GTEKDY 85 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhh-----cccccc
Confidence 3578999999999999999999999999999999865432 23567788888777764 455555444 234677
Q ss_pred eeeeecccccCCchhhhhccccccc
Q 042887 125 KALIYEYMKCGSSEDWMHQSNDKLE 149 (628)
Q Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~ 149 (628)
..+|||.. |-+|++.+.-.....+
T Consensus 86 nvlVMdLL-GPsLEdLfnfC~R~ft 109 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFCSRRFT 109 (341)
T ss_pred ceeeeecc-CccHHHHHHHHhhhhh
Confidence 78999975 5688887765554444
No 468
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=97.67 E-value=4.1e-05 Score=67.91 Aligned_cols=93 Identities=15% Similarity=0.225 Sum_probs=72.0
Q ss_pred HHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc-ccchhhhHHHHHHHHhhc-CCCCcccccceeeecccc
Q 042887 43 LSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK-QKGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFK 120 (628)
Q Consensus 43 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 120 (628)
...+.++......||+|+||.|-+-++..+|...|+|.+... ..+..++..+|+++..+. ..|.+|.++++ +.
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa-----~~ 115 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGA-----LF 115 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehh-----hh
Confidence 344445556667899999999999999999999999999754 334556788899875544 69999999998 44
Q ss_pred ccceeeeeecccccCCchhhh
Q 042887 121 GVDFKALIYEYMKCGSSEDWM 141 (628)
Q Consensus 121 ~~~~~~lv~e~~~~g~L~~~l 141 (628)
.+...++.||.|.. ++..+-
T Consensus 116 regdvwIcME~M~t-Sldkfy 135 (282)
T KOG0984|consen 116 REGDVWICMELMDT-SLDKFY 135 (282)
T ss_pred ccccEEEeHHHhhh-hHHHHH
Confidence 58889999999974 454443
No 469
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=97.65 E-value=2.3e-05 Score=83.24 Aligned_cols=83 Identities=28% Similarity=0.365 Sum_probs=66.4
Q ss_pred CcCceeecCCcee-EEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcC-CCCcccccceeeeccccccceeeee
Q 042887 51 SASNMIGQGSFGF-VYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVDFKALI 128 (628)
Q Consensus 51 ~~~~~iG~G~~g~-V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~~~~lv 128 (628)
.-.+++|.|+-|+ ||+|.+ .|+.||||++-... .....||+..++.-+ |||||+++.... +..+.|+.
T Consensus 512 ~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~-----d~qF~YIa 581 (903)
T KOG1027|consen 512 SPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQ-----DRQFLYIA 581 (903)
T ss_pred ccHHHcccCCCCcEEEEEee--CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeecc-----CCceEEEE
Confidence 3346788888765 599999 78899999875432 345679999998885 999999998754 48899999
Q ss_pred ecccccCCchhhhhcc
Q 042887 129 YEYMKCGSSEDWMHQS 144 (628)
Q Consensus 129 ~e~~~~g~L~~~l~~~ 144 (628)
.|.|.+ +|.+++...
T Consensus 582 lELC~~-sL~dlie~~ 596 (903)
T KOG1027|consen 582 LELCAC-SLQDLIESS 596 (903)
T ss_pred ehHhhh-hHHHHHhcc
Confidence 999986 899999775
No 470
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=97.62 E-value=0.00011 Score=64.66 Aligned_cols=80 Identities=13% Similarity=0.150 Sum_probs=62.5
Q ss_pred cCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCC--CCcccccceeeeccccccceeeeee
Q 042887 52 ASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRH--RNLIKIITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 52 ~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~~~~~~lv~ 129 (628)
+.+.+|+|.++.||++... ++.+++|....... ...+.+|+.++..+.| ..+.+++... ...+..+++|
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~-----~~~~~~~~v~ 72 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASG-----ESDGWSYLLM 72 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEc-----CCCCccEEEE
Confidence 3577999999999999983 47899998865433 4678899999999976 4777777663 3346789999
Q ss_pred cccccCCchhh
Q 042887 130 EYMKCGSSEDW 140 (628)
Q Consensus 130 e~~~~g~L~~~ 140 (628)
||++++.+..+
T Consensus 73 e~~~g~~~~~~ 83 (155)
T cd05120 73 EWIEGETLDEV 83 (155)
T ss_pred EecCCeecccC
Confidence 99998877643
No 471
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=97.60 E-value=3.2e-05 Score=71.48 Aligned_cols=99 Identities=18% Similarity=0.251 Sum_probs=72.8
Q ss_pred CCcCceeecCCceeEEEEEECCCCcEEEEEEeeccc-cchhhhHHHHHHHHhhcC-CCCcccccceeeeccccccceeee
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQ-KGAAKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVDFKAL 127 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~~~~l 127 (628)
.+....+|.|+.|.||+++++.+|...|||.+.+.. ....+++...++++..-. .|.||+.++++. .+...++
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi-----~n~dV~I 168 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI-----TNTDVFI 168 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe-----eCchHHH
Confidence 344566999999999999999999999999998753 455678888888776664 899999999955 4677888
Q ss_pred eecccccCCchhhhhccccccccccCC
Q 042887 128 IYEYMKCGSSEDWMHQSNDKLEAGNLG 154 (628)
Q Consensus 128 v~e~~~~g~L~~~l~~~~~~~~~~~~~ 154 (628)
.||.|.- -.+..+++....+++..+|
T Consensus 169 cMelMs~-C~ekLlkrik~piPE~ilG 194 (391)
T KOG0983|consen 169 CMELMST-CAEKLLKRIKGPIPERILG 194 (391)
T ss_pred HHHHHHH-HHHHHHHHhcCCchHHhhh
Confidence 9998753 2333444333344443333
No 472
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.60 E-value=3.4e-05 Score=77.74 Aligned_cols=92 Identities=18% Similarity=0.259 Sum_probs=70.2
Q ss_pred CCCcCceeecCCceeEEEEEECCCC-cEEEEEEeeccccchhhhHHHHHHHHhhcCC----CCcccccceeeeccccccc
Q 042887 49 NFSASNMIGQGSFGFVYKGKLGETG-TTVAVKVMNLKQKGAAKSFVTECEALSNVRH----RNLIKIITVCSSIDFKGVD 123 (628)
Q Consensus 49 ~~~~~~~iG~G~~g~V~~~~~~~~~-~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h----~nIv~l~~~~~~~~~~~~~ 123 (628)
.|.+.+.||+|+||.||.|.+..++ +.+|+|............+..|..++..+.. +++.++++... ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 7999999999999999999987664 5789998876544333377888888888863 57778877731 3467
Q ss_pred eeeeeecccccCCchhhhhccc
Q 042887 124 FKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
+.|+||+.+ |.+|.+......
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~ 115 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNP 115 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCC
Confidence 889999976 568888765444
No 473
>PHA02882 putative serine/threonine kinase; Provisional
Probab=97.59 E-value=0.00018 Score=71.61 Aligned_cols=93 Identities=16% Similarity=0.274 Sum_probs=58.8
Q ss_pred hCCCCcCceeecCCceeEEEEEECCC---CcEEEEEEeeccccch-----------hhhHHHHHHHHhhcCCCCcccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGET---GTTVAVKVMNLKQKGA-----------AKSFVTECEALSNVRHRNLIKIIT 112 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~---~~~~avK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~nIv~l~~ 112 (628)
.++|++.+.||+|+||.||+|.+..+ +..+|+|+........ ......+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 36799999999999999999999777 6677887654332111 011223334556678999999998
Q ss_pred eeeeccccccceeeeeecccccCCchhhh
Q 042887 113 VCSSIDFKGVDFKALIYEYMKCGSSEDWM 141 (628)
Q Consensus 113 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l 141 (628)
++... .......++++|++.. ++.+.+
T Consensus 91 ~~~~~-~~~~~~~~~~~~~~~~-~~~~~~ 117 (294)
T PHA02882 91 CGSFK-RCRMYYRFILLEKLVE-NTKEIF 117 (294)
T ss_pred eeeEe-cCCceEEEEEEehhcc-CHHHHH
Confidence 75431 0111245667776543 344333
No 474
>PRK12274 serine/threonine protein kinase; Provisional
Probab=97.47 E-value=0.00028 Score=64.57 Aligned_cols=80 Identities=10% Similarity=-0.009 Sum_probs=59.1
Q ss_pred CcCceeecCCceeEEEEEECCCCcEEEEEEeeccccch----hhhHHHHHHHHhhcC-CCCcccccceeeecccccccee
Q 042887 51 SASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGA----AKSFVTECEALSNVR-HRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 51 ~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
.+...+++|+||+||.+.. .+..++.+.+.....+. ...+.+|+++|+++. |++|++++++ ...
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---------~~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---------DGR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---------cCE
Confidence 3557899999999997766 56777766665433211 125789999999996 5888888775 235
Q ss_pred eeeecccccCCchhhh
Q 042887 126 ALIYEYMKCGSSEDWM 141 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l 141 (628)
+++|||+.|.+|.+..
T Consensus 74 ~lvmeyI~G~~L~~~~ 89 (218)
T PRK12274 74 HLDRSYLAGAAMYQRP 89 (218)
T ss_pred EEEEeeecCccHHhhh
Confidence 8999999998886543
No 475
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.46 E-value=6e-05 Score=82.34 Aligned_cols=162 Identities=18% Similarity=0.205 Sum_probs=106.9
Q ss_pred hCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccC--C-----------cCc--cCCCCCCEEEeecccCc
Q 042887 183 ANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKL--P-----------LSI--WNISSLEIISLHSNRFE 247 (628)
Q Consensus 183 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~--p-----------~~~--~~l~~L~~L~L~~n~l~ 247 (628)
...-++...++.+.......-....... |+.|.|.+-...... . ..+ ..-.+|++||+++...-
T Consensus 57 ~~~f~ltki~l~~~~~~~~~~~~l~~~~-L~sl~LGnl~~~k~~~~~~~~idi~~lL~~~Ln~~sr~nL~~LdI~G~~~~ 135 (699)
T KOG3665|consen 57 IRKFNLTKIDLKNVTLQHQTLEMLRKQD-LESLKLGNLDKIKQDYLDDATIDIISLLKDLLNEESRQNLQHLDISGSELF 135 (699)
T ss_pred hhhheeEEeeccceecchhHHHHHhhcc-ccccCCcchHhhhhhhhhhhhccHHHHHHHHHhHHHHHhhhhcCccccchh
Confidence 3444667777776665533333344444 777777654322100 0 001 12357999999987643
Q ss_pred -ccCChhhhhCCCCCcEEecccCccccc-ccccccCCCCCCEEEcccccceeecccccccCCCCCEEEccCCcCCCcCCC
Q 042887 248 -GSLPLNIGFNIPNVNFLSVGQNNFTGS-LPHSFSNASNLQVLDVYKNHFSGQVKIDFNRLSNLSRLFLSKNNLGTESTS 325 (628)
Q Consensus 248 -~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 325 (628)
..-|..++..+|+|+.|.+++=.+... ......++++|..||+|+.+++.. ..++.+++|+.|.+.+-.+..
T Consensus 136 s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~---- 209 (699)
T KOG3665|consen 136 SNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFES---- 209 (699)
T ss_pred hccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCc----
Confidence 233556677799999999998766532 234467889999999999999855 457788999999888766643
Q ss_pred CccccccccCCCCCceeecccCCcccc
Q 042887 326 DLDFLTLLTNCSQMEMLYLNTNKFGGV 352 (628)
Q Consensus 326 ~~~~~~~l~~~~~L~~L~l~~n~~~~~ 352 (628)
......+.++++|+.||+|..+....
T Consensus 210 -~~~l~~LF~L~~L~vLDIS~~~~~~~ 235 (699)
T KOG3665|consen 210 -YQDLIDLFNLKKLRVLDISRDKNNDD 235 (699)
T ss_pred -hhhHHHHhcccCCCeeeccccccccc
Confidence 24455677888999999988876443
No 476
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=97.45 E-value=7.6e-05 Score=77.28 Aligned_cols=92 Identities=21% Similarity=0.213 Sum_probs=75.5
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhc-CCCCcccccceeeecccccccee
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNV-RHRNLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~ 125 (628)
++.|.+...+|.|+|+.|-++.+..+++.+|+|++.+.. ..-.+|+.++... +||||++.++++ ++....
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~-----~~~~~~ 391 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVY-----EDGKEI 391 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeeccee-----cCCcee
Confidence 578899889999999999999999999999999997652 2234566666555 699999999995 458999
Q ss_pred eeeecccccCCchhhhhccccc
Q 042887 126 ALIYEYMKCGSSEDWMHQSNDK 147 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~ 147 (628)
|+|||.+.||.+.+.+......
T Consensus 392 ~~v~e~l~g~ell~ri~~~~~~ 413 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKPEF 413 (612)
T ss_pred eeeehhccccHHHHHHHhcchh
Confidence 9999999999998877655433
No 477
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=97.42 E-value=0.00015 Score=76.71 Aligned_cols=35 Identities=26% Similarity=0.405 Sum_probs=30.7
Q ss_pred CCCCcCceeecCCceeEEEEEECCCCcEEEEEEeec
Q 042887 48 NNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNL 83 (628)
Q Consensus 48 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~ 83 (628)
..|+. +.+|+|++|.||+|+.+.+|+.||||+.+.
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP 154 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRP 154 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCc
Confidence 45666 789999999999999987799999999964
No 478
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=97.26 E-value=0.00026 Score=68.89 Aligned_cols=100 Identities=19% Similarity=0.329 Sum_probs=73.5
Q ss_pred HHHHHhCCCCcCceeecCCceeEEEEEECCCC-----cEEEEEEeecc-ccchhhhHHHHHHHHhhcCCCCcccccceee
Q 042887 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGETG-----TTVAVKVMNLK-QKGAAKSFVTECEALSNVRHRNLIKIITVCS 115 (628)
Q Consensus 42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~-----~~~avK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~ 115 (628)
+....+.+++....+-+|.||.||+|.+++-. +.|-+|.++.. ++-+...+.+|.-.+..+.|||+..+.+++.
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 33445667888888999999999999886432 22445555332 3334567889999999999999999999876
Q ss_pred eccccccceeeeeecccccCCchhhhhccc
Q 042887 116 SIDFKGVDFKALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 116 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~ 145 (628)
. +....+.++.++.-|.|..|+...+
T Consensus 358 e----~~~~P~V~y~~~~~gNLK~FL~~Cr 383 (563)
T KOG1024|consen 358 E----DYATPFVLYPATGVGNLKSFLQICR 383 (563)
T ss_pred e----ccCcceEEEeccCcchHHHHHHHhc
Confidence 3 4556677778888899999987433
No 479
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=97.25 E-value=0.00066 Score=62.36 Aligned_cols=31 Identities=35% Similarity=0.407 Sum_probs=27.0
Q ss_pred CceeecCCceeEEEEEECCCCcEEEEEEeecc
Q 042887 53 SNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK 84 (628)
Q Consensus 53 ~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~ 84 (628)
.+.||+|+||.||+|.+. +|+.||||+....
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~ 32 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTG 32 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecC
Confidence 467999999999999986 7899999998653
No 480
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.21 E-value=0.0003 Score=78.22 Aligned_cols=92 Identities=23% Similarity=0.353 Sum_probs=66.9
Q ss_pred HHHHHhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcC---CCCcccccceeeecc
Q 042887 42 DLSKATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVR---HRNLIKIITVCSSID 118 (628)
Q Consensus 42 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~ 118 (628)
+.+...+.|.+.+.+|+|+||.||+|.... |+.||+|+-+....|. |.--.+++.+|+ -+.|..+..+..
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~--- 764 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHV--- 764 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHc---
Confidence 334455789999999999999999999966 9999999987665543 222223455555 245555555532
Q ss_pred ccccceeeeeecccccCCchhhhh
Q 042887 119 FKGVDFKALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~ 142 (628)
..+.-++|+||.+.|+|.+++.
T Consensus 765 --~~~~S~lv~ey~~~Gtlld~~N 786 (974)
T KOG1166|consen 765 --FQNASVLVSEYSPYGTLLDLIN 786 (974)
T ss_pred --cCCcceeeeeccccccHHHhhc
Confidence 2556679999999999999987
No 481
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.19 E-value=0.00023 Score=65.94 Aligned_cols=82 Identities=29% Similarity=0.371 Sum_probs=41.6
Q ss_pred hhccCCCCEeeCcCC--cCcccCCccccCCCCCCeEECcCceeeeecCcc---ccCCCCCCEEECCCCcccccCc---hh
Q 042887 482 VGNLRNLAEFDLSEN--HFSNEIPVTLSACTTLEYLHLQGNSFSGSLPLS---LKTLKSIKELDLSRNNLSGQIP---KY 553 (628)
Q Consensus 482 ~~~l~~L~~L~Ls~N--~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~---~~~l~~L~~L~Ls~N~l~~~~~---~~ 553 (628)
|..+++|++|.+|.| ++.+..+.....+|+|++|++++|+|+. +.. +..+++|..||+.+|..+...- ..
T Consensus 61 ~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~--lstl~pl~~l~nL~~Ldl~n~~~~~l~dyre~v 138 (260)
T KOG2739|consen 61 FPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKD--LSTLRPLKELENLKSLDLFNCSVTNLDDYREKV 138 (260)
T ss_pred CCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccc--ccccchhhhhcchhhhhcccCCccccccHHHHH
Confidence 334556666666666 4444333334444666666666666652 222 3344556666666666553211 12
Q ss_pred hhcccCCCeEec
Q 042887 554 LENLLFLAYLNL 565 (628)
Q Consensus 554 ~~~l~~L~~L~l 565 (628)
|.-+++|++||-
T Consensus 139 f~ll~~L~~LD~ 150 (260)
T KOG2739|consen 139 FLLLPSLKYLDG 150 (260)
T ss_pred HHHhhhhccccc
Confidence 444555555443
No 482
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.05 E-value=0.00037 Score=64.60 Aligned_cols=85 Identities=25% Similarity=0.228 Sum_probs=45.6
Q ss_pred CCcCeeeeccccccccCCcCCCCCCCCCeEecccC--ccccccCccccCCCCCCeEecCCcccccccCCcccCCcchhcc
Q 042887 386 VNINAFGVEYNQLTGTIPHAIGELKNLQGLALVRN--SLRGTIPDTLGNLTLLNRLFLGFNNLQGNVPSSLGNCQNLMTL 463 (628)
Q Consensus 386 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n--~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l 463 (628)
..|+.+++.+..++. -..|-.+++|+.|.++.| ++.+-++.....+++|+++++++|+|.. +.++..++.|..+
T Consensus 43 ~~le~ls~~n~gltt--~~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~--lstl~pl~~l~nL 118 (260)
T KOG2739|consen 43 VELELLSVINVGLTT--LTNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKD--LSTLRPLKELENL 118 (260)
T ss_pred cchhhhhhhccceee--cccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccc--ccccchhhhhcch
Confidence 344444444444431 123455667777777777 5554444444555777777777777752 4444444444333
Q ss_pred cceEEcCCCcCc
Q 042887 464 SRLLDLSGNLLG 475 (628)
Q Consensus 464 ~~~L~Ls~N~l~ 475 (628)
..|++.+|..+
T Consensus 119 -~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 119 -KSLDLFNCSVT 129 (260)
T ss_pred -hhhhcccCCcc
Confidence 45555555544
No 483
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=97.00 E-value=0.0018 Score=65.23 Aligned_cols=88 Identities=28% Similarity=0.460 Sum_probs=71.7
Q ss_pred CCcCceeecCCceeEEEEEECCCCcEEEEEEeecccc---chhhhHHHHHHHHhhcCCC-Ccccccceeeecccccccee
Q 042887 50 FSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK---GAAKSFVTECEALSNVRHR-NLIKIITVCSSIDFKGVDFK 125 (628)
Q Consensus 50 ~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~E~~~l~~l~h~-nIv~l~~~~~~~~~~~~~~~ 125 (628)
|.+.+.+|.|+||.||++.+. ..+|+|.+..... .....+.+|+..++.+.|+ +|+++.+... .....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQ-----DEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEe-----cCCEE
Confidence 677788999999999999996 7789999976532 2467899999999999988 7999988853 34557
Q ss_pred eeeecccccCCchhhhhccc
Q 042887 126 ALIYEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 126 ~lv~e~~~~g~L~~~l~~~~ 145 (628)
+++++++.++++.+++....
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~ 93 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIG 93 (384)
T ss_pred EEEEecCCCCcHHHHHHhcc
Confidence 99999999999997665443
No 484
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=96.93 E-value=0.0013 Score=68.85 Aligned_cols=85 Identities=18% Similarity=0.162 Sum_probs=54.0
Q ss_pred CceeecCCceeEEEEEECCCCcEEEEEEeeccccch----------------------------------------hhhH
Q 042887 53 SNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGA----------------------------------------AKSF 92 (628)
Q Consensus 53 ~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------------------~~~~ 92 (628)
.+.||.|++|.||+|+. .+|+.||||+.+..-... .-.|
T Consensus 122 ~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 36799999999999998 478999999986431000 0024
Q ss_pred HHHHHHHhhcC----CCCcccccceeeeccccccceeeeeecccccCCchhhhh
Q 042887 93 VTECEALSNVR----HRNLIKIITVCSSIDFKGVDFKALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 93 ~~E~~~l~~l~----h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~ 142 (628)
.+|+..+.++. |..-+.+-.++. +.....++||||++|+++.+...
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~----~~~~~~vLvmE~i~G~~L~~~~~ 250 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYW----DRTSERVLTMEWIDGIPLSDIAA 250 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEeh----hhcCCceEEEEeECCcccccHHH
Confidence 45555555442 222222222221 12445789999999999988754
No 485
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.88 E-value=7.1e-05 Score=69.44 Aligned_cols=82 Identities=17% Similarity=0.301 Sum_probs=40.9
Q ss_pred CCCCCEEEeecccCcccCChhhhhCCCCCcEEecccCcccccccccccCCCCCCEEEcccccceeeccc-ccccCCCCCE
Q 042887 233 ISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLPHSFSNASNLQVLDVYKNHFSGQVKI-DFNRLSNLSR 311 (628)
Q Consensus 233 l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~-~~~~l~~L~~ 311 (628)
+.+.+.|++-++.++ . ..+..+|+.|++|.||-|+|+.. ..|..+++|++|+|..|.|.++..- -+.++++|+.
T Consensus 18 l~~vkKLNcwg~~L~-D--Isic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLD-D--ISICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHhhhhcccCCCcc-H--HHHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhh
Confidence 344555666666655 2 23344566666666666666533 2344555555555555555433211 1234444555
Q ss_pred EEccCCcC
Q 042887 312 LFLSKNNL 319 (628)
Q Consensus 312 L~L~~n~l 319 (628)
|+|..|.-
T Consensus 93 LWL~ENPC 100 (388)
T KOG2123|consen 93 LWLDENPC 100 (388)
T ss_pred HhhccCCc
Confidence 55544443
No 486
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.68 E-value=7.9e-05 Score=69.13 Aligned_cols=100 Identities=20% Similarity=0.156 Sum_probs=55.6
Q ss_pred CCCCCEeecccccCcccCCcCccCCCCCCEEEeecccCcccCChhhhhCCCCCcEEecccCccccccc-ccccCCCCCCE
Q 042887 209 LRSLNYLSISENNFSCKLPLSIWNISSLEIISLHSNRFEGSLPLNIGFNIPNVNFLSVGQNNFTGSLP-HSFSNASNLQV 287 (628)
Q Consensus 209 l~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~ 287 (628)
+.+.+.|+.-++.+.++ .....++.|+.|.||-|+|+ .+... ..+++|++|+|..|.|.+... ..+.++++|+.
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIs-sL~pl--~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKIS-SLAPL--QRCTRLKELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccc-cchhH--HHHHHHHHHHHHhcccccHHHHHHHhcCchhhh
Confidence 45566666666666532 22345666777777777766 33221 236667777777776664322 23566666777
Q ss_pred EEcccccceeeccc-----ccccCCCCCEEE
Q 042887 288 LDVYKNHFSGQVKI-----DFNRLSNLSRLF 313 (628)
Q Consensus 288 L~L~~N~i~~~~~~-----~~~~l~~L~~L~ 313 (628)
|.|..|.-.+..+. .+..+|+|+.||
T Consensus 93 LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 93 LWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred HhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 77766654433222 233456666554
No 487
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=96.58 E-value=0.0034 Score=55.10 Aligned_cols=79 Identities=16% Similarity=0.220 Sum_probs=57.6
Q ss_pred CcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCccc-ccceeeeccccccceeeeee
Q 042887 51 SASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLIK-IITVCSSIDFKGVDFKALIY 129 (628)
Q Consensus 51 ~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~-l~~~~~~~~~~~~~~~~lv~ 129 (628)
...+.||+|.+|.||.|.+ .|..+|+|+-...+ ....+..|++++..+.-..+.. ++.+ +..++.|
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~y---------g~~~i~m 91 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEW--RGGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFY---------GEDFIRM 91 (201)
T ss_pred hhhhhhhcccccEEEEeec--cCceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEe---------chhhhhh
Confidence 3457799999999999999 67789999865433 3467889999999887655543 3333 2334569
Q ss_pred cccccCCchhhhh
Q 042887 130 EYMKCGSSEDWMH 142 (628)
Q Consensus 130 e~~~~g~L~~~l~ 142 (628)
||..|-.|.+...
T Consensus 92 e~i~G~~L~~~~~ 104 (201)
T COG2112 92 EYIDGRPLGKLEI 104 (201)
T ss_pred hhhcCcchhhhhh
Confidence 9999877766544
No 488
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=96.50 E-value=0.0024 Score=64.70 Aligned_cols=96 Identities=17% Similarity=0.311 Sum_probs=73.2
Q ss_pred HhCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcC------CCCcccccceeeeccc
Q 042887 46 ATNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVR------HRNLIKIITVCSSIDF 119 (628)
Q Consensus 46 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~------h~nIv~l~~~~~~~~~ 119 (628)
.-..|.+....|+|-|+.|.+|.+...|..||||++..... -.+.=.+|+++|++|. ..|+++++.. |
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~-----F 503 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRH-----F 503 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHH-----h
Confidence 34567888889999999999999999999999999976432 1233468999999994 2478888777 5
Q ss_pred cccceeeeeecccccCCchhhhhcccccc
Q 042887 120 KGVDFKALIYEYMKCGSSEDWMHQSNDKL 148 (628)
Q Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~ 148 (628)
......+||+|-.. ..|.+.+++-+.+.
T Consensus 504 ~hknHLClVFE~Ls-lNLRevLKKyG~nv 531 (752)
T KOG0670|consen 504 KHKNHLCLVFEPLS-LNLREVLKKYGRNV 531 (752)
T ss_pred hhcceeEEEehhhh-chHHHHHHHhCccc
Confidence 56788999999764 35777776665443
No 489
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=96.31 E-value=0.011 Score=56.48 Aligned_cols=87 Identities=9% Similarity=0.036 Sum_probs=58.7
Q ss_pred ceee-cCCceeEEEEEECCCCcEEEEEEeeccc-------------cchhhhHHHHHHHHhhcCCCCc--ccccceeeec
Q 042887 54 NMIG-QGSFGFVYKGKLGETGTTVAVKVMNLKQ-------------KGAAKSFVTECEALSNVRHRNL--IKIITVCSSI 117 (628)
Q Consensus 54 ~~iG-~G~~g~V~~~~~~~~~~~~avK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~nI--v~l~~~~~~~ 117 (628)
..+| .|+.|.||.+.. .+..+++|...... .....++.+|++++..+.|++| ++.++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 788888998887 47789999885311 1223567899999999998775 5555543210
Q ss_pred cccccceeeeeeccccc-CCchhhhhc
Q 042887 118 DFKGVDFKALIYEYMKC-GSSEDWMHQ 143 (628)
Q Consensus 118 ~~~~~~~~~lv~e~~~~-g~L~~~l~~ 143 (628)
.......++|||+++| .++.+++.+
T Consensus 115 -~~~~~~~~lV~e~l~G~~~L~~~l~~ 140 (239)
T PRK01723 115 -HGLFYRADILIERIEGARDLVALLQE 140 (239)
T ss_pred -cCcceeeeEEEEecCCCCCHHHHHhc
Confidence 0011233599999997 688887753
No 490
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=96.01 E-value=0.014 Score=55.14 Aligned_cols=85 Identities=13% Similarity=0.180 Sum_probs=60.2
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeecccc-chhhhHHHHHHHHhhcCCC--Ccccccceeeeccccccceeeeeec
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQK-GAAKSFVTECEALSNVRHR--NLIKIITVCSSIDFKGVDFKALIYE 130 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~E~~~l~~l~h~--nIv~l~~~~~~~~~~~~~~~~lv~e 130 (628)
+.+|.|.++.||++... +|+.+++|....... .....+.+|+++++.+.+. .+.+++....... .....+++||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEE
Confidence 56899999999999884 367899998765332 2345788999999998753 3455655532210 1135689999
Q ss_pred ccccCCchhhh
Q 042887 131 YMKCGSSEDWM 141 (628)
Q Consensus 131 ~~~~g~L~~~l 141 (628)
|++|+++.+.+
T Consensus 81 ~i~G~~l~~~~ 91 (223)
T cd05154 81 RVDGRVLRDRL 91 (223)
T ss_pred EeCCEecCCCC
Confidence 99998887654
No 491
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=95.98 E-value=0.0012 Score=61.08 Aligned_cols=88 Identities=22% Similarity=0.446 Sum_probs=69.1
Q ss_pred CcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeeeccccccceeeee
Q 042887 51 SASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSSIDFKGVDFKALI 128 (628)
Q Consensus 51 ~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv 128 (628)
.+.-.+.+..-|..|+|++ .|..+++|++... .....+.|..|...++-..||||..++++|.+ .....++
T Consensus 193 nl~tkl~e~hsgelwrgrw--qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns-----ppnlv~i 265 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRW--QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS-----PPNLVII 265 (448)
T ss_pred hhhhhhccCCCcccccccc--cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC-----CCCceEe
Confidence 3445577888899999999 4555666766432 33455778888888888899999999999865 6778899
Q ss_pred ecccccCCchhhhhccc
Q 042887 129 YEYMKCGSSEDWMHQSN 145 (628)
Q Consensus 129 ~e~~~~g~L~~~l~~~~ 145 (628)
..||+.|+|+..++...
T Consensus 266 sq~mp~gslynvlhe~t 282 (448)
T KOG0195|consen 266 SQYMPFGSLYNVLHEQT 282 (448)
T ss_pred eeeccchHHHHHHhcCc
Confidence 99999999999887654
No 492
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=95.98 E-value=0.002 Score=61.33 Aligned_cols=94 Identities=20% Similarity=0.250 Sum_probs=72.9
Q ss_pred hCCCCcCceeecCCceeEEEEEECCCCcEEEEEEeecc--ccchhhhHHHHHHHHhhcCCCCcccccceeee-ccccccc
Q 042887 47 TNNFSASNMIGQGSFGFVYKGKLGETGTTVAVKVMNLK--QKGAAKSFVTECEALSNVRHRNLIKIITVCSS-IDFKGVD 123 (628)
Q Consensus 47 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~~~ 123 (628)
...|.-.+.+|.|+= .|..|.+.-.++.||+|.+... .....++..||...|..+.|+||++++.+++. -..+...
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 346777888999987 7778888888999999988543 23456788999999999999999999998764 1123446
Q ss_pred eeeeeecccccCCchhhhh
Q 042887 124 FKALIYEYMKCGSSEDWMH 142 (628)
Q Consensus 124 ~~~lv~e~~~~g~L~~~l~ 142 (628)
.+|+|||+|.. ++.+.+.
T Consensus 95 e~y~v~e~m~~-nl~~vi~ 112 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVIL 112 (369)
T ss_pred hHHHHHHhhhh-HHHHHHH
Confidence 78999999974 5666554
No 493
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=95.74 E-value=0.019 Score=51.64 Aligned_cols=76 Identities=12% Similarity=0.065 Sum_probs=54.1
Q ss_pred ceeecCCceeEEEEEECCCCcEEEEEEeeccccchhhhHHHHHHHHhhcCCCCcc-cccceeeeccccccceeeeeeccc
Q 042887 54 NMIGQGSFGFVYKGKLGETGTTVAVKVMNLKQKGAAKSFVTECEALSNVRHRNLI-KIITVCSSIDFKGVDFKALIYEYM 132 (628)
Q Consensus 54 ~~iG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv-~l~~~~~~~~~~~~~~~~lv~e~~ 132 (628)
+.++.|.++.||++.. .++.|++|....... ....+.+|+.+++.+.+..++ +++... ....++||||+
T Consensus 4 ~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~-------~~~~~lv~e~i 73 (170)
T cd05151 4 SPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD-------PETGVLITEFI 73 (170)
T ss_pred eecCCcccCceEEEEE--CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe-------CCCCeEEEEec
Confidence 5689999999999998 478899998754332 223567899999988654443 444331 22357999999
Q ss_pred ccCCchh
Q 042887 133 KCGSSED 139 (628)
Q Consensus 133 ~~g~L~~ 139 (628)
+|.++.+
T Consensus 74 ~G~~l~~ 80 (170)
T cd05151 74 EGSELLT 80 (170)
T ss_pred CCCcccc
Confidence 9988754
No 494
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=95.46 E-value=0.00044 Score=62.60 Aligned_cols=88 Identities=18% Similarity=0.221 Sum_probs=72.8
Q ss_pred ccCCcCcccEEEccCCccccccchhhhCCCCCCEEecccCcCcccccccccCCCCCCEeecccccCcccCCcCccCCCCC
Q 042887 157 QRLNLLKLEMIDVGDNQLIGKFPDFIANFSALEAIDISANMLGGRIPDSLCQLRSLNYLSISENNFSCKLPLSIWNISSL 236 (628)
Q Consensus 157 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~p~~~~~l~~L 236 (628)
.+....+.+.||++.|++.. .-..|+-++.+..||++.|.+. ..|..+.++..++.+++..|..+ ..|.+++..+.+
T Consensus 37 ei~~~kr~tvld~~s~r~vn-~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~ 113 (326)
T KOG0473|consen 37 EIASFKRVTVLDLSSNRLVN-LGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHP 113 (326)
T ss_pred hhhccceeeeehhhhhHHHh-hccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCc
Confidence 45566788899999998763 4455777888889999999887 78888999999999999888887 688889999999
Q ss_pred CEEEeecccCc
Q 042887 237 EIISLHSNRFE 247 (628)
Q Consensus 237 ~~L~L~~n~l~ 247 (628)
+++++-+|.+.
T Consensus 114 k~~e~k~~~~~ 124 (326)
T KOG0473|consen 114 KKNEQKKTEFF 124 (326)
T ss_pred chhhhccCcch
Confidence 99988888765
No 495
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=95.39 E-value=0.0012 Score=65.11 Aligned_cols=38 Identities=11% Similarity=0.290 Sum_probs=16.2
Q ss_pred CCCCCceeecccCC-cccccchHHHhccccccEEEccCC
Q 042887 335 NCSQMEMLYLNTNK-FGGVFLRSIANLSAKITVIGMGDN 372 (628)
Q Consensus 335 ~~~~L~~L~l~~n~-~~~~~~~~~~~~~~~L~~L~l~~n 372 (628)
++.+|+.+-+..++ |+......++.-...|+.+++..+
T Consensus 318 ~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~ 356 (483)
T KOG4341|consen 318 HCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEEC 356 (483)
T ss_pred CCCceEEEeccccchhhhhhhhhhhcCChhhhhhccccc
Confidence 44555565555553 333333333322223444444433
No 496
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.32 E-value=0.0086 Score=32.96 Aligned_cols=19 Identities=32% Similarity=0.590 Sum_probs=9.3
Q ss_pred ccEEEccCCccccccchhhh
Q 042887 164 LEMIDVGDNQLIGKFPDFIA 183 (628)
Q Consensus 164 L~~L~Ls~n~l~~~~~~~~~ 183 (628)
|++|||++|+++ .+|+.|+
T Consensus 2 L~~Ldls~n~l~-~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSFS 20 (22)
T ss_dssp ESEEEETSSEES-EEGTTTT
T ss_pred ccEEECCCCcCE-eCChhhc
Confidence 455555555555 3443343
No 497
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.27 E-value=0.0093 Score=32.83 Aligned_cols=12 Identities=58% Similarity=1.077 Sum_probs=4.9
Q ss_pred CCeEECcCceee
Q 042887 512 LEYLHLQGNSFS 523 (628)
Q Consensus 512 L~~L~Ls~N~l~ 523 (628)
|++||+++|+++
T Consensus 2 L~~Ldls~n~l~ 13 (22)
T PF00560_consen 2 LEYLDLSGNNLT 13 (22)
T ss_dssp ESEEEETSSEES
T ss_pred ccEEECCCCcCE
Confidence 334444444444
No 498
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=95.08 E-value=0.0017 Score=64.04 Aligned_cols=84 Identities=12% Similarity=0.099 Sum_probs=41.6
Q ss_pred CCCCEEecccCcCccccc--ccccCCCCCCEeeccccc-CcccCCcCc-cCCCCCCEEEeecc-cCcccCChhhhhCCCC
Q 042887 186 SALEAIDISANMLGGRIP--DSLCQLRSLNYLSISENN-FSCKLPLSI-WNISSLEIISLHSN-RFEGSLPLNIGFNIPN 260 (628)
Q Consensus 186 ~~L~~L~Ls~n~l~~~~~--~~~~~l~~L~~L~Ls~N~-i~~~~p~~~-~~l~~L~~L~L~~n-~l~~~~~~~~~~~l~~ 260 (628)
..|+.|.+.+++-.+.-+ ..-...+++++|++.++. +++..-..+ ..+++|++|++..+ .++...-..+....++
T Consensus 138 g~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~k 217 (483)
T KOG4341|consen 138 GFLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRK 217 (483)
T ss_pred cccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhh
Confidence 457777777765332211 112456777777777665 111111111 23566677776663 3332222223344566
Q ss_pred CcEEecccC
Q 042887 261 VNFLSVGQN 269 (628)
Q Consensus 261 L~~L~L~~N 269 (628)
|++|+++.+
T Consensus 218 L~~lNlSwc 226 (483)
T KOG4341|consen 218 LKYLNLSWC 226 (483)
T ss_pred HHHhhhccC
Confidence 666666554
No 499
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=95.06 E-value=0.00018 Score=75.19 Aligned_cols=112 Identities=26% Similarity=0.250 Sum_probs=60.9
Q ss_pred CCCCCCeEecCCcccccccC----CcccCCcchhcccceEEcCCCcCcccc----chhhhcc-CCCCEeeCcCCcCcccC
Q 042887 432 NLTLLNRLFLGFNNLQGNVP----SSLGNCQNLMTLSRLLDLSGNLLGGSI----PLEVGNL-RNLAEFDLSENHFSNEI 502 (628)
Q Consensus 432 ~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~l~~~L~Ls~N~l~~~~----~~~~~~l-~~L~~L~Ls~N~l~~~~ 502 (628)
...++++|.+++|.++.... ..+...+.+ ...|++.+|++.+.. ...+..+ ..+++++++.|.|++..
T Consensus 202 ~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~---~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~ 278 (478)
T KOG4308|consen 202 PLSSLETLKLSRCGVTSSSCALLDEVLASGESL---LRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKG 278 (478)
T ss_pred ccccHHHHhhhhcCcChHHHHHHHHHHhccchh---hHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccc
Confidence 35566666676666552111 112222221 144788888887441 2334444 56788888888887543
Q ss_pred Cc----cccCCCCCCeEECcCceeeeecC----ccccCCCCCCEEECCCCcc
Q 042887 503 PV----TLSACTTLEYLHLQGNSFSGSLP----LSLKTLKSIKELDLSRNNL 546 (628)
Q Consensus 503 ~~----~~~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l 546 (628)
.. .+..++.+++|.++.|.+....- ........+..+-+.++..
T Consensus 279 ~~~L~~~l~~~~~l~~l~l~~n~l~~~~~~~~~~~l~~~~~~~~~~l~~~~~ 330 (478)
T KOG4308|consen 279 VRDLAEVLVSCRQLEELSLSNNPLTDYGVELLLEALERKTPLLHLVLGGTGK 330 (478)
T ss_pred hHHHHHHHhhhHHHHHhhcccCccccHHHHHHHHHhhhcccchhhhccccCc
Confidence 33 34456778888888888764221 1122234455555554443
No 500
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=94.85 E-value=0.0058 Score=65.50 Aligned_cols=36 Identities=17% Similarity=0.128 Sum_probs=18.6
Q ss_pred CCCCCEEEeecccCcccCC-hhhhhCCCCCcEEeccc
Q 042887 233 ISSLEIISLHSNRFEGSLP-LNIGFNIPNVNFLSVGQ 268 (628)
Q Consensus 233 l~~L~~L~L~~n~l~~~~~-~~~~~~l~~L~~L~L~~ 268 (628)
.+.|+.|.+.++.-...-. ..+....++|+.|++++
T Consensus 187 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~ 223 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSG 223 (482)
T ss_pred CchhhHhhhcccccCChhhHHHHHhhCchhheecccC
Confidence 5666777666653221111 12233466666666665
Done!