Query 042896
Match_columns 216
No_of_seqs 230 out of 1538
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 18:49:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042896.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042896hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 9.9E-41 3.4E-45 289.8 18.5 212 2-215 13-236 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 5.5E-33 1.9E-37 243.5 18.9 214 2-215 8-246 (482)
3 2acv_A Triterpene UDP-glucosyl 100.0 3.2E-31 1.1E-35 231.2 17.8 207 2-215 9-232 (463)
4 2c1x_A UDP-glucose flavonoid 3 100.0 1.3E-30 4.6E-35 226.9 20.3 212 2-215 7-234 (456)
5 2vch_A Hydroquinone glucosyltr 100.0 3.9E-30 1.3E-34 225.3 19.2 210 2-215 6-227 (480)
6 2iya_A OLEI, oleandomycin glyc 99.8 6.2E-18 2.1E-22 145.0 12.4 125 3-130 13-141 (424)
7 1iir_A Glycosyltransferase GTF 99.6 4.6E-16 1.6E-20 133.2 8.5 123 3-129 1-127 (415)
8 4amg_A Snogd; transferase, pol 99.6 2.8E-15 9.7E-20 127.0 11.9 127 2-131 22-161 (400)
9 2iyf_A OLED, oleandomycin glyc 99.5 7.7E-14 2.6E-18 119.5 12.4 125 3-130 8-136 (430)
10 3ia7_A CALG4; glycosysltransfe 99.5 5.1E-14 1.7E-18 119.1 10.6 124 3-128 5-133 (402)
11 1rrv_A Glycosyltransferase GTF 99.5 1.7E-14 5.9E-19 123.4 6.8 123 3-129 1-128 (416)
12 3rsc_A CALG2; TDP, enediyne, s 99.5 1.1E-13 3.6E-18 118.0 8.8 125 2-128 20-149 (415)
13 2p6p_A Glycosyl transferase; X 99.3 5.7E-12 1.9E-16 106.3 11.1 125 3-129 1-138 (384)
14 2yjn_A ERYCIII, glycosyltransf 99.3 4.6E-12 1.6E-16 109.1 9.7 125 3-129 21-175 (441)
15 3oti_A CALG3; calicheamicin, T 99.3 1.6E-11 5.4E-16 104.2 11.6 121 2-128 20-160 (398)
16 3h4t_A Glycosyltransferase GTF 99.2 7.3E-12 2.5E-16 106.8 6.4 124 3-130 1-127 (404)
17 4fzr_A SSFS6; structural genom 99.2 2.4E-11 8.3E-16 103.0 8.4 126 2-129 15-154 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.2 6.5E-11 2.2E-15 99.9 8.5 123 2-129 1-145 (391)
19 3otg_A CALG1; calicheamicin, T 99.1 4.4E-10 1.5E-14 95.3 9.5 122 2-128 20-160 (412)
20 3s2u_A UDP-N-acetylglucosamine 98.7 8.8E-08 3E-12 80.6 10.1 116 1-125 1-121 (365)
21 1f0k_A MURG, UDP-N-acetylgluco 97.8 0.00013 4.3E-09 60.3 9.4 113 3-127 7-127 (364)
22 3fro_A GLGA glycogen synthase; 96.5 0.054 1.9E-06 45.1 13.2 125 1-127 1-153 (439)
23 3c48_A Predicted glycosyltrans 95.5 0.065 2.2E-06 44.9 9.2 115 3-127 21-153 (438)
24 2jjm_A Glycosyl transferase, g 94.1 0.72 2.5E-05 37.9 11.7 111 2-126 15-132 (394)
25 2gek_A Phosphatidylinositol ma 92.0 0.76 2.6E-05 37.7 8.9 41 2-42 20-64 (406)
26 3okp_A GDP-mannose-dependent a 91.8 0.48 1.7E-05 38.7 7.3 104 2-127 4-117 (394)
27 3s28_A Sucrose synthase 1; gly 90.4 0.29 9.9E-06 45.2 5.0 117 3-125 279-436 (816)
28 2wqk_A 5'-nucleotidase SURE; S 88.0 2.3 7.9E-05 33.4 8.0 108 3-128 2-128 (251)
29 2i2x_B MTAC, methyltransferase 85.9 7.2 0.00025 30.5 9.9 38 2-39 123-160 (258)
30 3hbm_A UDP-sugar hydrolase; PS 84.7 1.5 5.1E-05 35.1 5.4 86 10-126 12-100 (282)
31 2x0d_A WSAF; GT4 family, trans 84.6 0.7 2.4E-05 38.9 3.6 39 2-40 46-89 (413)
32 1v4v_A UDP-N-acetylglucosamine 84.4 5.1 0.00018 32.4 8.8 108 3-126 6-122 (376)
33 1vgv_A UDP-N-acetylglucosamine 83.1 6.3 0.00022 31.9 8.8 35 4-39 2-37 (384)
34 2iw1_A Lipopolysaccharide core 83.1 1.2 3.9E-05 36.1 4.2 51 4-56 2-55 (374)
35 2r60_A Glycosyl transferase, g 83.1 1.3 4.3E-05 37.8 4.6 116 3-127 8-151 (499)
36 2iuy_A Avigt4, glycosyltransfe 82.7 1.5 5.2E-05 35.1 4.8 29 13-41 30-58 (342)
37 2phj_A 5'-nucleotidase SURE; S 80.9 7.9 0.00027 30.4 8.0 94 19-128 17-128 (251)
38 2x6q_A Trehalose-synthase TRET 80.6 2.5 8.4E-05 34.9 5.4 39 2-40 40-80 (416)
39 3beo_A UDP-N-acetylglucosamine 76.6 17 0.00059 29.0 9.4 37 3-40 9-47 (375)
40 3vue_A GBSS-I, granule-bound s 75.9 3.7 0.00013 35.8 5.3 38 2-39 9-52 (536)
41 1rzu_A Glycogen synthase 1; gl 74.8 3 0.0001 35.2 4.4 37 4-40 2-44 (485)
42 2qzs_A Glycogen synthase; glyc 73.2 3.6 0.00012 34.7 4.5 37 4-40 2-44 (485)
43 3vot_A L-amino acid ligase, BL 72.7 15 0.0005 30.6 8.1 25 98-122 75-101 (425)
44 2yxb_A Coenzyme B12-dependent 72.7 4 0.00014 29.6 4.0 38 2-39 18-55 (161)
45 1y80_A Predicted cobalamin bin 72.7 5.2 0.00018 30.1 4.9 38 2-39 88-125 (210)
46 1ccw_A Protein (glutamate muta 72.6 6.5 0.00022 27.5 5.0 38 2-39 3-40 (137)
47 1psw_A ADP-heptose LPS heptosy 69.0 41 0.0014 26.6 10.1 100 3-123 1-105 (348)
48 3ezx_A MMCP 1, monomethylamine 65.6 9.4 0.00032 29.0 4.9 38 2-39 92-129 (215)
49 1pno_A NAD(P) transhydrogenase 63.4 10 0.00035 27.7 4.4 36 3-40 24-64 (180)
50 3qjg_A Epidermin biosynthesis 62.9 15 0.00053 27.0 5.5 42 3-45 6-47 (175)
51 2q5c_A NTRC family transcripti 62.1 7.7 0.00026 29.0 3.8 45 83-132 129-173 (196)
52 1d4o_A NADP(H) transhydrogenas 59.8 11 0.00039 27.6 4.1 36 3-40 23-63 (184)
53 2lpm_A Two-component response 59.0 15 0.00051 25.2 4.6 38 86-125 43-85 (123)
54 1id1_A Putative potassium chan 58.6 8 0.00027 27.1 3.3 33 2-39 3-35 (153)
55 4hwg_A UDP-N-acetylglucosamine 58.4 18 0.00062 29.9 5.9 101 11-126 17-124 (385)
56 2fsv_C NAD(P) transhydrogenase 58.1 12 0.00042 28.0 4.1 36 3-40 47-87 (203)
57 1djl_A Transhydrogenase DIII; 57.8 12 0.00043 28.0 4.1 36 3-40 46-86 (207)
58 2hy7_A Glucuronosyltransferase 56.8 9.5 0.00033 31.6 3.9 36 2-39 14-52 (406)
59 3tov_A Glycosyl transferase fa 56.3 13 0.00043 30.3 4.5 102 2-123 8-114 (349)
60 2bru_C NAD(P) transhydrogenase 55.4 13 0.00045 27.3 3.8 36 3-40 31-71 (186)
61 2pju_A Propionate catabolism o 55.2 13 0.00044 28.5 4.1 41 82-127 140-180 (225)
62 3zqu_A Probable aromatic acid 54.5 17 0.00058 27.6 4.6 41 2-43 4-44 (209)
63 3pdi_B Nitrogenase MOFE cofact 53.7 70 0.0024 27.2 8.8 76 18-125 324-399 (458)
64 1g5t_A COB(I)alamin adenosyltr 53.5 67 0.0023 23.9 9.6 96 3-108 29-130 (196)
65 3to5_A CHEY homolog; alpha(5)b 52.8 19 0.00066 24.9 4.4 32 98-129 57-97 (134)
66 1mvl_A PPC decarboxylase athal 52.7 27 0.00094 26.4 5.5 42 2-45 19-60 (209)
67 1g63_A Epidermin modifying enz 51.9 24 0.00081 26.1 4.9 43 2-45 2-44 (181)
68 4ds3_A Phosphoribosylglycinami 51.6 23 0.00078 26.8 4.9 45 83-127 19-65 (209)
69 2r8r_A Sensor protein; KDPD, P 51.6 23 0.0008 27.2 5.0 39 2-40 6-44 (228)
70 3lyu_A Putative hydrogenase; t 51.5 15 0.0005 25.7 3.6 35 4-41 20-54 (142)
71 3p9x_A Phosphoribosylglycinami 50.6 24 0.00084 26.7 4.9 46 83-128 14-61 (211)
72 3lqk_A Dipicolinate synthase s 49.4 25 0.00085 26.4 4.8 41 3-44 8-49 (201)
73 4b4o_A Epimerase family protei 49.2 11 0.00038 29.5 2.9 32 4-39 2-33 (298)
74 4g6h_A Rotenone-insensitive NA 48.1 11 0.00036 32.6 2.8 33 2-39 42-74 (502)
75 3gl9_A Response regulator; bet 47.8 38 0.0013 22.0 5.2 42 86-129 36-86 (122)
76 3kkj_A Amine oxidase, flavin-c 47.3 12 0.00041 27.6 2.8 18 20-37 15-32 (336)
77 3tqr_A Phosphoribosylglycinami 47.0 29 0.001 26.3 4.9 45 83-127 17-62 (215)
78 3mcu_A Dipicolinate synthase, 45.3 26 0.00088 26.5 4.3 39 3-42 6-45 (207)
79 1meo_A Phosophoribosylglycinam 45.2 35 0.0012 25.7 5.1 44 84-127 13-58 (209)
80 3ezl_A Acetoacetyl-COA reducta 44.2 41 0.0014 25.4 5.5 31 4-37 14-44 (256)
81 3av3_A Phosphoribosylglycinami 44.2 34 0.0012 25.8 4.9 44 85-128 17-62 (212)
82 3kcq_A Phosphoribosylglycinami 43.6 30 0.001 26.3 4.5 45 83-127 20-66 (215)
83 3bul_A Methionine synthase; tr 43.0 29 0.001 30.6 4.8 38 2-39 98-135 (579)
84 2ywr_A Phosphoribosylglycinami 42.9 44 0.0015 25.2 5.3 45 84-128 14-60 (216)
85 1sbz_A Probable aromatic acid 42.0 32 0.0011 25.8 4.3 39 4-43 2-41 (197)
86 1jkx_A GART;, phosphoribosylgl 40.8 44 0.0015 25.2 5.0 44 84-127 13-58 (212)
87 3fwz_A Inner membrane protein 40.8 18 0.00062 24.9 2.7 34 2-40 7-40 (140)
88 1qzu_A Hypothetical protein MD 40.5 36 0.0012 25.6 4.5 42 3-45 20-62 (206)
89 2gk4_A Conserved hypothetical 40.2 22 0.00076 27.4 3.3 21 20-40 33-53 (232)
90 3r3s_A Oxidoreductase; structu 39.7 47 0.0016 26.0 5.3 33 4-39 50-82 (294)
91 3eag_A UDP-N-acetylmuramate:L- 39.5 35 0.0012 27.4 4.6 34 2-39 4-37 (326)
92 3lrx_A Putative hydrogenase; a 39.5 24 0.00083 25.0 3.2 36 4-42 25-60 (158)
93 2ejb_A Probable aromatic acid 39.5 51 0.0017 24.4 5.1 40 3-43 2-41 (189)
94 3auf_A Glycinamide ribonucleot 38.5 40 0.0014 25.8 4.5 44 85-128 36-81 (229)
95 3dzc_A UDP-N-acetylglucosamine 37.4 25 0.00084 29.0 3.4 108 3-126 26-142 (396)
96 1p3y_1 MRSD protein; flavoprot 37.3 33 0.0011 25.6 3.7 41 3-44 9-49 (194)
97 1kjn_A MTH0777; hypotethical p 37.1 57 0.002 23.4 4.7 41 5-45 10-51 (157)
98 3t6k_A Response regulator rece 37.0 62 0.0021 21.4 5.0 32 98-129 48-88 (136)
99 2g1u_A Hypothetical protein TM 36.3 45 0.0015 23.2 4.2 32 3-39 20-51 (155)
100 3zzm_A Bifunctional purine bio 35.9 74 0.0025 27.6 6.0 45 15-61 19-65 (523)
101 3m6m_D Sensory/regulatory prot 35.1 50 0.0017 22.2 4.3 31 98-128 58-99 (143)
102 1p9o_A Phosphopantothenoylcyst 34.0 29 0.001 28.0 3.2 22 20-41 69-90 (313)
103 3cf4_G Acetyl-COA decarboxylas 32.9 67 0.0023 23.0 4.8 28 98-126 36-69 (170)
104 3oy2_A Glycosyltransferase B73 31.5 50 0.0017 26.7 4.3 37 4-41 2-41 (413)
105 3ot5_A UDP-N-acetylglucosamine 31.5 39 0.0013 27.9 3.7 109 3-126 28-145 (403)
106 1pq4_A Periplasmic binding pro 31.0 1.2E+02 0.0042 23.8 6.4 52 83-136 224-277 (291)
107 2vqe_B 30S ribosomal protein S 30.8 1.9E+02 0.0065 22.5 9.0 31 98-128 158-190 (256)
108 3ew7_A LMO0794 protein; Q8Y8U8 30.0 36 0.0012 24.8 2.9 32 4-39 2-33 (221)
109 3f6p_A Transcriptional regulat 30.0 57 0.002 21.0 3.8 42 86-129 36-83 (120)
110 3e8x_A Putative NAD-dependent 29.6 36 0.0012 25.3 2.9 32 4-39 23-54 (236)
111 1z82_A Glycerol-3-phosphate de 29.4 43 0.0015 26.7 3.5 32 2-38 14-45 (335)
112 1u7z_A Coenzyme A biosynthesis 29.2 43 0.0015 25.6 3.3 21 20-40 38-58 (226)
113 2gt1_A Lipopolysaccharide hept 28.8 44 0.0015 26.3 3.5 48 3-50 1-51 (326)
114 3llv_A Exopolyphosphatase-rela 28.5 40 0.0014 22.9 2.8 32 3-39 7-38 (141)
115 3n0v_A Formyltetrahydrofolate 28.1 85 0.0029 24.9 4.9 42 83-126 102-145 (286)
116 3h2s_A Putative NADH-flavin re 27.9 41 0.0014 24.6 2.9 20 20-39 14-33 (224)
117 3oz2_A Digeranylgeranylglycero 27.6 36 0.0012 27.2 2.8 18 20-37 17-34 (397)
118 3qxc_A Dethiobiotin synthetase 27.5 94 0.0032 23.8 5.0 34 4-37 22-57 (242)
119 3da8_A Probable 5'-phosphoribo 26.9 88 0.003 23.6 4.6 42 84-126 25-67 (215)
120 3noh_A Putative peptide bindin 26.8 44 0.0015 23.0 2.5 17 20-36 78-94 (139)
121 1dbw_A Transcriptional regulat 26.6 1.3E+02 0.0044 19.2 5.4 42 86-129 37-85 (126)
122 4as2_A Phosphorylcholine phosp 26.5 52 0.0018 26.6 3.5 23 17-39 146-168 (327)
123 3f67_A Putative dienelactone h 26.4 1.2E+02 0.004 21.8 5.3 33 5-38 35-67 (241)
124 1lss_A TRK system potassium up 26.4 53 0.0018 21.8 3.1 32 3-39 5-36 (140)
125 3mc3_A DSRE/DSRF-like family p 26.4 1.1E+02 0.0036 20.9 4.7 29 13-41 29-57 (134)
126 1hdo_A Biliverdin IX beta redu 26.4 46 0.0016 23.8 2.9 32 4-39 5-36 (206)
127 2qr3_A Two-component system re 26.0 1.3E+02 0.0044 19.5 5.1 32 98-129 47-90 (140)
128 3jte_A Response regulator rece 25.8 1.2E+02 0.0041 19.9 5.0 32 97-128 48-86 (143)
129 3cg0_A Response regulator rece 25.7 95 0.0033 20.2 4.4 32 98-129 54-92 (140)
130 3dm5_A SRP54, signal recogniti 25.7 1E+02 0.0035 26.1 5.2 38 4-41 102-139 (443)
131 2ts1_A Tyrosyl-tRNA synthetase 25.5 61 0.0021 27.3 3.8 25 14-39 47-71 (419)
132 3c3m_A Response regulator rece 25.4 1.2E+02 0.0043 19.7 4.9 31 98-128 47-86 (138)
133 3p0j_A Tyrosyl-tRNA synthetase 25.1 59 0.002 29.4 3.8 40 2-41 382-426 (690)
134 4hb9_A Similarities with proba 25.0 46 0.0016 26.8 3.0 29 3-36 2-30 (412)
135 1jzt_A Hypothetical 27.5 kDa p 24.9 46 0.0016 25.7 2.8 35 3-39 59-94 (246)
136 2rjn_A Response regulator rece 24.4 1.2E+02 0.0041 20.3 4.8 42 86-129 41-89 (154)
137 3hn2_A 2-dehydropantoate 2-red 24.4 71 0.0024 25.2 3.9 34 2-40 2-35 (312)
138 1y42_X Tyrosyl-tRNA synthetase 24.2 50 0.0017 27.5 3.0 27 14-41 81-107 (392)
139 3d3k_A Enhancer of mRNA-decapp 24.1 54 0.0018 25.6 3.0 35 3-39 86-121 (259)
140 3h1g_A Chemotaxis protein CHEY 23.7 1.5E+02 0.0052 19.0 5.4 32 98-129 51-91 (129)
141 4gbj_A 6-phosphogluconate dehy 23.6 93 0.0032 24.5 4.5 31 3-38 6-36 (297)
142 2a9o_A Response regulator; ess 23.6 1.3E+02 0.0045 18.7 4.7 32 98-129 45-82 (120)
143 3gt7_A Sensor protein; structu 23.3 1.4E+02 0.0049 20.0 5.0 42 86-129 41-91 (154)
144 4f0j_A Probable hydrolytic enz 23.3 1.1E+02 0.0038 22.8 4.8 37 3-40 47-83 (315)
145 3hh1_A Tetrapyrrole methylase 23.2 79 0.0027 21.0 3.4 18 20-37 69-86 (117)
146 3dqp_A Oxidoreductase YLBE; al 23.2 49 0.0017 24.2 2.6 20 20-39 14-33 (219)
147 3i83_A 2-dehydropantoate 2-red 23.2 47 0.0016 26.4 2.6 34 2-40 2-35 (320)
148 4e5v_A Putative THUA-like prot 23.1 1.1E+02 0.0037 24.1 4.7 37 2-39 4-43 (281)
149 4ao6_A Esterase; hydrolase, th 23.0 70 0.0024 24.1 3.5 36 5-40 58-95 (259)
150 2ywl_A Thioredoxin reductase r 23.0 56 0.0019 23.0 2.8 22 19-40 13-34 (180)
151 2x5n_A SPRPN10, 26S proteasome 22.9 1.3E+02 0.0045 21.9 4.9 21 16-36 121-141 (192)
152 3n0r_A Response regulator; sig 22.8 1.1E+02 0.0038 23.8 4.7 31 98-128 205-242 (286)
153 1zi8_A Carboxymethylenebutenol 22.8 1.6E+02 0.0053 21.0 5.4 34 5-39 31-64 (236)
154 2dkn_A 3-alpha-hydroxysteroid 22.7 61 0.0021 24.1 3.1 20 19-38 14-33 (255)
155 3kjh_A CO dehydrogenase/acetyl 22.7 73 0.0025 23.6 3.6 37 4-40 2-38 (254)
156 2ehd_A Oxidoreductase, oxidore 22.6 62 0.0021 23.9 3.1 19 20-38 19-37 (234)
157 1p6q_A CHEY2; chemotaxis, sign 22.6 1.5E+02 0.0053 18.8 4.9 21 98-118 51-73 (129)
158 3h5i_A Response regulator/sens 22.5 1.7E+02 0.0057 19.1 5.2 41 86-127 39-86 (140)
159 1jil_A Tyrrs, tyrosyl-tRNA syn 22.4 59 0.002 27.4 3.1 26 14-40 49-74 (420)
160 3hwr_A 2-dehydropantoate 2-red 22.3 67 0.0023 25.5 3.4 31 2-37 19-49 (318)
161 1i3c_A Response regulator RCP1 22.3 1.8E+02 0.0061 19.3 5.6 32 98-129 61-101 (149)
162 1jx7_A Hypothetical protein YC 22.1 1.4E+02 0.0049 19.2 4.6 30 14-43 16-47 (117)
163 3a10_A Response regulator; pho 22.0 1.5E+02 0.0052 18.4 5.3 30 98-127 45-81 (116)
164 3d3j_A Enhancer of mRNA-decapp 22.0 61 0.0021 25.9 3.0 35 3-39 133-168 (306)
165 1dhr_A Dihydropteridine reduct 21.8 64 0.0022 24.1 3.0 20 19-38 20-39 (241)
166 2fuk_A XC6422 protein; A/B hyd 21.7 1.7E+02 0.0058 20.6 5.4 24 15-38 54-77 (220)
167 3cu5_A Two component transcrip 21.7 1.5E+02 0.0052 19.5 4.8 29 98-126 49-84 (141)
168 3i7m_A XAA-Pro dipeptidase; st 21.7 50 0.0017 22.5 2.2 32 14-45 1-32 (140)
169 4dll_A 2-hydroxy-3-oxopropiona 21.6 1.2E+02 0.004 24.0 4.7 32 3-39 32-63 (320)
170 1tmy_A CHEY protein, TMY; chem 21.6 1.3E+02 0.0045 18.8 4.3 32 98-129 47-85 (120)
171 1cyd_A Carbonyl reductase; sho 21.4 68 0.0023 23.8 3.1 19 20-38 21-39 (244)
172 3obb_A Probable 3-hydroxyisobu 21.3 82 0.0028 24.9 3.7 32 3-39 4-35 (300)
173 3dhn_A NAD-dependent epimerase 21.2 59 0.002 23.8 2.7 32 4-39 6-37 (227)
174 2o8n_A APOA-I binding protein; 21.2 67 0.0023 25.2 3.0 35 3-39 80-115 (265)
175 2pnf_A 3-oxoacyl-[acyl-carrier 21.1 69 0.0024 23.8 3.1 20 19-38 20-39 (248)
176 3b2n_A Uncharacterized protein 21.0 1.3E+02 0.0045 19.4 4.3 32 98-129 49-87 (133)
177 3f9i_A 3-oxoacyl-[acyl-carrier 20.9 70 0.0024 23.9 3.1 20 19-38 27-46 (249)
178 3bfv_A CAPA1, CAPB2, membrane 20.9 1.2E+02 0.0043 23.3 4.6 38 3-40 82-121 (271)
179 3awd_A GOX2181, putative polyo 20.7 71 0.0024 24.0 3.1 19 20-38 27-45 (260)
180 1uxo_A YDEN protein; hydrolase 20.6 1.5E+02 0.005 20.5 4.7 37 3-39 5-42 (192)
181 2g36_A Tryptophanyl-tRNA synth 20.6 50 0.0017 26.9 2.3 26 14-39 28-53 (340)
182 2qxy_A Response regulator; reg 20.5 1.5E+02 0.0052 19.3 4.6 41 86-129 38-85 (142)
183 3crn_A Response regulator rece 20.4 1.7E+02 0.0058 18.9 4.8 32 98-129 47-85 (132)
184 2qzj_A Two-component response 20.4 1.3E+02 0.0044 19.7 4.2 32 98-129 48-85 (136)
185 3dkr_A Esterase D; alpha beta 20.4 1.3E+02 0.0043 21.5 4.4 33 4-37 24-56 (251)
186 3l77_A Short-chain alcohol deh 20.3 74 0.0025 23.5 3.1 20 19-38 15-34 (235)
187 3afn_B Carbonyl reductase; alp 20.2 74 0.0025 23.7 3.1 21 19-39 20-40 (258)
188 1nff_A Putative oxidoreductase 20.1 74 0.0025 24.2 3.1 19 20-38 21-39 (260)
189 2ph3_A 3-oxoacyl-[acyl carrier 20.1 68 0.0023 23.8 2.9 18 19-36 14-31 (245)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=9.9e-41 Score=289.85 Aligned_cols=212 Identities=20% Similarity=0.269 Sum_probs=164.0
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeccccccccCC------CCceEEeccCCCCCCCCcccCCHHHH
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKG--VKATLATTHYTAKSICA------PHVGVEPISDGFDEGGYAQAKNEDLY 73 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G--~~Vt~it~~~~~~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~ 73 (216)
++||+++|+|+|||++||++|||+|++|| ++|||++|+.+..++.+ ++|+|+.+|+|+|+ +.+...+....
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~-~~~~~~~~~~~ 91 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPK-GYVSSGNPREP 91 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCT-TCCCCSCTTHH
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCC-CccccCChHHH
Confidence 57999999999999999999999999999 99999999876655422 46999999999887 44443343333
Q ss_pred HHHHHHhhhHHHHHHHHHhh-cCCCCceEEEeCCCCccHHHHHHHhCCCceeecccchhHHHHHHHHhc--CCCcCCCCC
Q 042896 74 LKSFEDNGSRTLSELIKRYK-NSSFPVNCVVYDSFLPWALDVAKEYGLYGAAFFTNSATVCNIFCRMHH--GLLTLPVKL 150 (216)
Q Consensus 74 ~~~~~~~~~~~l~~~l~~~~-~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~~--~~~~~~~~~ 150 (216)
+..+...+.+.+++.++++. +..++++|||+|++++|+.++|+++|||++.|||++++.++++++.+. .........
T Consensus 92 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~~~ 171 (454)
T 3hbf_A 92 IFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVH 171 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCccc
Confidence 44444444556777776643 223478999999999999999999999999999999999999887642 111100011
Q ss_pred CCCcee-cCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHhhccCCCCEEEEcchhhhcHHHHHhhh
Q 042896 151 EDTPLS-IPGLPSLNFIDLPTFVKFPESYPAYLAMKLGQYSNLDKADWIFGNTFQELEGEVRVLFL 215 (216)
Q Consensus 151 ~~~~~~-vPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvNsf~eLE~~~~~~~~ 215 (216)
.++.+. +||+|+++.+|||+++.. +..+.+.+.+.+..+...+++++++|||+|||++++++++
T Consensus 172 ~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~ 236 (454)
T 3hbf_A 172 DVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELN 236 (454)
T ss_dssp TSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHH
T ss_pred cccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHH
Confidence 234565 899999999999998763 3333466777788888999999999999999999998875
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=5.5e-33 Score=243.47 Aligned_cols=214 Identities=28% Similarity=0.465 Sum_probs=156.4
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCC----------CCceEEeccCCCCCCC--CcccCC
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICA----------PHVGVEPISDGFDEGG--YAQAKN 69 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~----------~~i~~~~~~~~~~~~~--~~~~~~ 69 (216)
++||+++|+|++||++||++||++|++|||+|||++++.+..++.+ ++++|+.+|+++|+.+ .....+
T Consensus 8 ~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~~~ 87 (482)
T 2pq6_A 8 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQD 87 (482)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------CC
T ss_pred CCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcchh
Confidence 4799999999999999999999999999999999999887654422 3799999998776511 111234
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHhhcC--CCCceEEEeCCCCccHHHHHHHhCCCceeecccchhHHHHHHHHh----cCC
Q 042896 70 EDLYLKSFEDNGSRTLSELIKRYKNS--SFPVNCVVYDSFLPWALDVAKEYGLYGAAFFTNSATVCNIFCRMH----HGL 143 (216)
Q Consensus 70 ~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~----~~~ 143 (216)
...++..+...+.+.++++++++..+ ..++||||+|.+++|+..+|+++|||++.|++++++.++.+++++ .+.
T Consensus 88 ~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 167 (482)
T 2pq6_A 88 VPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGI 167 (482)
T ss_dssp HHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcCC
Confidence 44455545455678889999887532 246899999999999999999999999999999998777665432 233
Q ss_pred CcCCCC---CC---CCce-ecCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHhhccCCCCEEEEcchhhhcHHHHHhhh
Q 042896 144 LTLPVK---LE---DTPL-SIPGLPSLNFIDLPTFVKFPESYPAYLAMKLGQYSNLDKADWIFGNTFQELEGEVRVLFL 215 (216)
Q Consensus 144 ~~~~~~---~~---~~~~-~vPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvNsf~eLE~~~~~~~~ 215 (216)
.+.... .. +..+ .+||+++++.+++|.++...+..+...+.+.+..+...+++++++|||++||.+++++++
T Consensus 168 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~~~ 246 (482)
T 2pq6_A 168 IPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALS 246 (482)
T ss_dssp SSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHHH
T ss_pred CCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHHHH
Confidence 332111 00 1223 379999899999997765432223344555556667788999999999999999988765
No 3
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.97 E-value=3.2e-31 Score=231.25 Aligned_cols=207 Identities=20% Similarity=0.252 Sum_probs=151.2
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEecccccc-----cc---CC--CCceEEeccCC-CCCCCCcccC
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASK--GVKATLATTHYTAK-----SI---CA--PHVGVEPISDG-FDEGGYAQAK 68 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~--G~~Vt~it~~~~~~-----~~---~~--~~i~~~~~~~~-~~~~~~~~~~ 68 (216)
+.||+++|+|++||++||++||++|++| ||+|||++|+.+.. .+ .. .+|+|+.+|++ ++. .+...
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~--~~~~~ 86 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPP--QELLK 86 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCC--GGGGG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCc--ccccC
Confidence 4699999999999999999999999999 99999999987632 11 11 57999999875 332 11112
Q ss_pred CHHHHHHHHHHhhhHHHHHHHHHhhcCCCCceEEEeCCCCccHHHHHHHhCCCceeecccchhHHHHHHHHhcCCCcCCC
Q 042896 69 NEDLYLKSFEDNGSRTLSELIKRYKNSSFPVNCVVYDSFLPWALDVAKEYGLYGAAFFTNSATVCNIFCRMHHGLLTLPV 148 (216)
Q Consensus 69 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~~~~~~~~~ 148 (216)
+....+......+.+.++++++++ + ..++||||+|.++.|+.++|+++|||+++|++++++.++++++++......+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~ll~~~-~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (463)
T 2acv_A 87 SPEFYILTFLESLIPHVKATIKTI-L-SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVF 164 (463)
T ss_dssp SHHHHHHHHHHHTHHHHHHHHHHH-C-CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCC
T ss_pred CccHHHHHHHHhhhHHHHHHHHhc-c-CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCCC
Confidence 222212222234566788888876 2 24699999999999999999999999999999999988888777532211111
Q ss_pred CCCCC---ceecCCC-CCCCCCCCCCCCCCCCCchHHHHHHHHHhhccCCCCEEEEcchhhhcHHHHHhhh
Q 042896 149 KLEDT---PLSIPGL-PSLNFIDLPTFVKFPESYPAYLAMKLGQYSNLDKADWIFGNTFQELEGEVRVLFL 215 (216)
Q Consensus 149 ~~~~~---~~~vPg~-p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvNsf~eLE~~~~~~~~ 215 (216)
.+.+. ...+||+ ++++.+|+|..+.+. .. .++.+.+..+..++++|+++|||+|||+++++++.
T Consensus 165 ~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~--~~-~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~ 232 (463)
T 2acv_A 165 DDSDRDHQLLNIPGISNQVPSNVLPDACFNK--DG-GYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALY 232 (463)
T ss_dssp CCSSGGGCEECCTTCSSCEEGGGSCHHHHCT--TT-HHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHH
T ss_pred CCccccCceeECCCCCCCCChHHCchhhcCC--ch-HHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHH
Confidence 11122 4568999 889989998655432 11 44555666677888999999999999999988764
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.97 E-value=1.3e-30 Score=226.92 Aligned_cols=212 Identities=26% Similarity=0.364 Sum_probs=146.8
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeccccccccC-------CCCceEEeccCCCCCCCCcccCCHHH
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKG--VKATLATTHYTAKSIC-------APHVGVEPISDGFDEGGYAQAKNEDL 72 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G--~~Vt~it~~~~~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~ 72 (216)
+.||+++|+|++||++||++||++|++|| +.||+++++.+..++. ..+|+|+.+++++|+ +.+...+...
T Consensus 7 ~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~-~~~~~~~~~~ 85 (456)
T 2c1x_A 7 NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPE-GYVFAGRPQE 85 (456)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCT-TCCCCCCTTH
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCC-cccccCChHH
Confidence 57999999999999999999999999986 5678898875443321 147999999988876 3221112222
Q ss_pred HHHHHHHhhhHHHHHHHHHhhcC-CCCceEEEeCCCCccHHHHHHHhCCCceeecccchhHHHHHHHHhc-----CCCcC
Q 042896 73 YLKSFEDNGSRTLSELIKRYKNS-SFPVNCVVYDSFLPWALDVAKEYGLYGAAFFTNSATVCNIFCRMHH-----GLLTL 146 (216)
Q Consensus 73 ~~~~~~~~~~~~l~~~l~~~~~~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~~-----~~~~~ 146 (216)
.+..+...+.+.++++++++.++ ..++||||+|.++.|+.++|+++|||++.||+++++.++.+++... +..+.
T Consensus 86 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (456)
T 2c1x_A 86 DIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGI 165 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSCC
T ss_pred HHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCccc
Confidence 33333333345566666654321 2468999999999999999999999999999999888776654321 21110
Q ss_pred CCCCCCCce-ecCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHhhccCCCCEEEEcchhhhcHHHHHhhh
Q 042896 147 PVKLEDTPL-SIPGLPSLNFIDLPTFVKFPESYPAYLAMKLGQYSNLDKADWIFGNTFQELEGEVRVLFL 215 (216)
Q Consensus 147 ~~~~~~~~~-~vPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvNsf~eLE~~~~~~~~ 215 (216)
....+..+ .+||+++++.+|+|..+........+.+.+.+..+..++++++++|||+|||.+++++++
T Consensus 166 -~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~ 234 (456)
T 2c1x_A 166 -QGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLK 234 (456)
T ss_dssp -TTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHH
T ss_pred -ccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHH
Confidence 01112334 489999999999997654322222333444455556678999999999999999887764
No 5
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.97 E-value=3.9e-30 Score=225.30 Aligned_cols=210 Identities=20% Similarity=0.247 Sum_probs=151.2
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEecccc--ccccC------CCCceEEeccCCCCCCCCcccCCHHH
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASK-GVKATLATTHYT--AKSIC------APHVGVEPISDGFDEGGYAQAKNEDL 72 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~-G~~Vt~it~~~~--~~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~ 72 (216)
+.||+++|+|++||++||++||++|++| ||+|||+++..+ ...+. ..+++|+.++++..+ +.....+...
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~~~~~~~~~~ 84 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLT-DLSSSTRIES 84 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCT-TSCTTCCHHH
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCC-CCCCchhHHH
Confidence 4799999999999999999999999998 999999999874 22221 257999999864211 1111123322
Q ss_pred HHHHHHHhhhHHHHHHHHHhhcCCCCc-eEEEeCCCCccHHHHHHHhCCCceeecccchhHHHHHHHHhc--CCCcCCCC
Q 042896 73 YLKSFEDNGSRTLSELIKRYKNSSFPV-NCVVYDSFLPWALDVAKEYGLYGAAFFTNSATVCNIFCRMHH--GLLTLPVK 149 (216)
Q Consensus 73 ~~~~~~~~~~~~l~~~l~~~~~~~~~~-d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~~--~~~~~~~~ 149 (216)
.+......+.+.++++++++.. ..++ ||||+|.++.|+.++|+++|||++.|++++++.++++++++. .....+..
T Consensus 85 ~~~~~~~~~~~~l~~ll~~~~~-~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (480)
T 2vch_A 85 RISLTVTRSNPELRKVFDSFVE-GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFR 163 (480)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHH-TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSCGG
T ss_pred HHHHHHHhhhHHHHHHHHHhcc-CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCccc
Confidence 2222333456778888887642 2357 999999999999999999999999999999988888776542 11111111
Q ss_pred CCCCceecCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHhhccCCCCEEEEcchhhhcHHHHHhhh
Q 042896 150 LEDTPLSIPGLPSLNFIDLPTFVKFPESYPAYLAMKLGQYSNLDKADWIFGNTFQELEGEVRVLFL 215 (216)
Q Consensus 150 ~~~~~~~vPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvNsf~eLE~~~~~~~~ 215 (216)
+.+....+||+++++..++|..+.+.. ...++.+.+..+..++++|+++|||+|||..++++++
T Consensus 164 ~~~~~~~~Pg~~p~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~ 227 (480)
T 2vch_A 164 ELTEPLMLPGCVPVAGKDFLDPAQDRK--DDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQ 227 (480)
T ss_dssp GCSSCBCCTTCCCBCGGGSCGGGSCTT--SHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHH
T ss_pred ccCCcccCCCCCCCChHHCchhhhcCC--chHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHH
Confidence 112345689999999999997664322 1244555566667788999999999999999988775
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.75 E-value=6.2e-18 Score=145.05 Aligned_cols=125 Identities=19% Similarity=0.248 Sum_probs=91.5
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccCCCCCCCCcc----cCCHHHHHHHHH
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISDGFDEGGYAQ----AKNEDLYLKSFE 78 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 78 (216)
.||+++|++++||++|+++||++|+++||+||+++++...+.+...+++|++++++++. +... ..+....+..+.
T Consensus 13 ~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 91 (424)
T 2iya_A 13 RHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAGATPVVYDSILPK-ESNPEESWPEDQESAMGLFL 91 (424)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCEEEECCCCSCC-TTCTTCCCCSSHHHHHHHHH
T ss_pred ceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEecCccccc-cccchhhcchhHHHHHHHHH
Confidence 59999999999999999999999999999999999988765554467899988865543 2111 123333333333
Q ss_pred HhhhHHHHHHHHHhhcCCCCceEEEeCCCCccHHHHHHHhCCCceeecccch
Q 042896 79 DNGSRTLSELIKRYKNSSFPVNCVVYDSFLPWALDVAKEYGLYGAAFFTNSA 130 (216)
Q Consensus 79 ~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a 130 (216)
......++++.+.+ ++ .++||||+|.++.|+..+|+++|||++.+++.++
T Consensus 92 ~~~~~~~~~l~~~l-~~-~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~ 141 (424)
T 2iya_A 92 DEAVRVLPQLEDAY-AD-DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFV 141 (424)
T ss_dssp HHHHHHHHHHHHHT-TT-SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCC
T ss_pred HHHHHHHHHHHHHH-hc-cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccc
Confidence 32222333333333 22 3589999999999999999999999999998765
No 7
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.63 E-value=4.6e-16 Score=133.25 Aligned_cols=123 Identities=15% Similarity=0.175 Sum_probs=84.1
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccCCCCCCCCcc-cCCHHHHHHHHHHhh
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISDGFDEGGYAQ-AKNEDLYLKSFEDNG 81 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 81 (216)
.||++++++++||++|++.||++|+++||+|||+++....+.+...+++++.++....+ .... .......+..+ +
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~i~~~~~~-~~~~~~~~~~~~~~~~---~ 76 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSARA-PIQRAKPLTAEDVRRF---T 76 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEECCC--------CCSCCCHHHHHHH---H
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHcCCeeeeCCCCHHH-HhhcccccchHHHHHH---H
Confidence 48999999999999999999999999999999999987655444468899988754321 1111 11111111111 1
Q ss_pred hHHHHHHHHHhhcCCCCceEEEeCC-CCcc--HHHHHHHhCCCceeecccc
Q 042896 82 SRTLSELIKRYKNSSFPVNCVVYDS-FLPW--ALDVAKEYGLYGAAFFTNS 129 (216)
Q Consensus 82 ~~~l~~~l~~~~~~~~~~d~vI~D~-~~~~--~~~vA~~lgiP~v~f~~~~ 129 (216)
...+.+.++++.+...++||||+|. +..| +..+|+++|||++.+++++
T Consensus 77 ~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~ 127 (415)
T 1iir_A 77 TEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCP 127 (415)
T ss_dssp HHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred HHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCC
Confidence 1223344444331123689999998 6788 8999999999999998776
No 8
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.62 E-value=2.8e-15 Score=127.01 Aligned_cols=127 Identities=14% Similarity=0.127 Sum_probs=82.3
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccCCCCCC------CCc---cc----C
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISDGFDEG------GYA---QA----K 68 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~~~~~~------~~~---~~----~ 68 (216)
..||+++|+|++||++|++.||++|++|||+|||++++....... .++.++.+..+.... ... .. .
T Consensus 22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (400)
T 4amg_A 22 SMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-AGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSEGL 100 (400)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-TTCEEEESSTTCCSHHHHSCCC------------
T ss_pred CCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-cCCeeEecCCchhHhhhccccccccccccchhhh
Confidence 468999999999999999999999999999999999886654332 456666554322110 000 00 0
Q ss_pred CHHHHHHHHHHhhhHHHHHHHHHhhcCCCCceEEEeCCCCccHHHHHHHhCCCceeecccchh
Q 042896 69 NEDLYLKSFEDNGSRTLSELIKRYKNSSFPVNCVVYDSFLPWALDVAKEYGLYGAAFFTNSAT 131 (216)
Q Consensus 69 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~ 131 (216)
....+...+.......+.++++.+.. .+||+||+|.+..|+..+|+++|||++.++.....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~ 161 (400)
T 4amg_A 101 GEGFFAEMFARVSAVAVDGALRTARS--WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPAD 161 (400)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECcchHHHHHHHHHcCCCceeecccccc
Confidence 01111112222222223333333222 14799999999999999999999999998766543
No 9
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.52 E-value=7.7e-14 Score=119.50 Aligned_cols=125 Identities=18% Similarity=0.220 Sum_probs=88.1
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccCCCCCCCCcc----cCCHHHHHHHHH
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISDGFDEGGYAQ----AKNEDLYLKSFE 78 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 78 (216)
.||++++.++.||++|++.|++.|+++||+|+++++......+...+++++.++...+. +... ..+....+..+.
T Consensus 8 ~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 86 (430)
T 2iyf_A 8 AHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGPRPVLYHSTLPG-PDADPEAWGSTLLDNVEPFL 86 (430)
T ss_dssp CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTTSCEEEECCCCSCC-TTSCGGGGCSSHHHHHHHHH
T ss_pred ceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEEcCCcCcc-ccccccccchhhHHHHHHHH
Confidence 59999999999999999999999999999999999987655454467888888754332 1111 123333222222
Q ss_pred HhhhHHHHHHHHHhhcCCCCceEEEeCCCCccHHHHHHHhCCCceeecccch
Q 042896 79 DNGSRTLSELIKRYKNSSFPVNCVVYDSFLPWALDVAKEYGLYGAAFFTNSA 130 (216)
Q Consensus 79 ~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a 130 (216)
..+...+.++.+.+. + .+|||||+|.+..|+..+|+++|||.+.+++...
T Consensus 87 ~~~~~~~~~l~~~l~-~-~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~ 136 (430)
T 2iyf_A 87 NDAIQALPQLADAYA-D-DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLV 136 (430)
T ss_dssp HHHHHHHHHHHHHHT-T-SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCC
T ss_pred HHHHHHHHHHHHHhh-c-cCCCEEEECCccHHHHHHHHHcCCCEEEEecccc
Confidence 222223333333332 2 3589999999888899999999999999987653
No 10
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.52 E-value=5.1e-14 Score=119.13 Aligned_cols=124 Identities=20% Similarity=0.223 Sum_probs=85.9
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccCCCCCCC-C--cccCCHHHHHHH-HH
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISDGFDEGG-Y--AQAKNEDLYLKS-FE 78 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~~~~~~~-~--~~~~~~~~~~~~-~~ 78 (216)
.||+++++++.||++|++.||++|+++||+|+++++....+.+...+++++.++..++... . ....+....+.. +.
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLVYV 84 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTTCEEEECCCGGGTSSSSSSSCCTTHHHHHHHHHH
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcCCEEEecccccccccccccccccchHHHHHHHHH
Confidence 4999999999999999999999999999999999987766555446788888764332211 0 011122222222 22
Q ss_pred HhhhHHHHHHHHHhhcCCCCceEEEeC-CCCccHHHHHHHhCCCceeeccc
Q 042896 79 DNGSRTLSELIKRYKNSSFPVNCVVYD-SFLPWALDVAKEYGLYGAAFFTN 128 (216)
Q Consensus 79 ~~~~~~l~~~l~~~~~~~~~~d~vI~D-~~~~~~~~vA~~lgiP~v~f~~~ 128 (216)
......+.++.+.+. + .+||+||+| .+..|+..+|+++|||++.+.+.
T Consensus 85 ~~~~~~~~~l~~~l~-~-~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~ 133 (402)
T 3ia7_A 85 RENVAILRAAEEALG-D-NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGG 133 (402)
T ss_dssp HHHHHHHHHHHHHHT-T-CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESS
T ss_pred HHHHHHHHHHHHHHh-c-cCCCEEEECchHHHHHHHHHHhhCCCEEEEecc
Confidence 222233444444442 2 358999999 78888999999999999988643
No 11
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.51 E-value=1.7e-14 Score=123.36 Aligned_cols=123 Identities=14% Similarity=0.057 Sum_probs=82.3
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccCCCCCCCCcc--cCCHHHHHHHHHHh
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISDGFDEGGYAQ--AKNEDLYLKSFEDN 80 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 80 (216)
.||++++.++.||++|++.||++|+++||+||+++++...+.+...+++++.++..... .... .......+..+.
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-- 77 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGLPQHM-MLQEGMPPPPPEEEQRLA-- 77 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSCCGGG-CCCTTSCCCCHHHHHHHH--
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCCeeeecCCCHHH-HHhhccccchhHHHHHHH--
Confidence 48999999999999999999999999999999999987654444457888888753211 1110 111111111111
Q ss_pred hhHHHHHHHHHhhcCCCCceEEEeCCC-Ccc--HHHHHHHhCCCceeecccc
Q 042896 81 GSRTLSELIKRYKNSSFPVNCVVYDSF-LPW--ALDVAKEYGLYGAAFFTNS 129 (216)
Q Consensus 81 ~~~~l~~~l~~~~~~~~~~d~vI~D~~-~~~--~~~vA~~lgiP~v~f~~~~ 129 (216)
...+.++++.+.....++||||+|.+ ..| +..+|+++|||++.+++.+
T Consensus 78 -~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~ 128 (416)
T 1rrv_A 78 -AMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSP 128 (416)
T ss_dssp -HHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred -HHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 11223333333211135899999974 456 7889999999999987765
No 12
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.47 E-value=1.1e-13 Score=118.04 Aligned_cols=125 Identities=15% Similarity=0.144 Sum_probs=85.5
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccCCCCCCCCc---ccCCHHHHHHH-H
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISDGFDEGGYA---QAKNEDLYLKS-F 77 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~-~ 77 (216)
..||+++++++.||++|++.||++|.++||+|+++++....+.+...+++++.++..++..... ...+....+.. +
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAGATVVPYQSEIIDADAAEVFGSDDLGVRPHLMY 99 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCSTTTCCHHHHHHSSSSCHHHHHHH
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhcCCEEEeccccccccccchhhccccHHHHHHHHH
Confidence 3689999999999999999999999999999999998877665555678898887544321100 00011011111 2
Q ss_pred HHhhhHHHHHHHHHhhcCCCCceEEEeC-CCCccHHHHHHHhCCCceeeccc
Q 042896 78 EDNGSRTLSELIKRYKNSSFPVNCVVYD-SFLPWALDVAKEYGLYGAAFFTN 128 (216)
Q Consensus 78 ~~~~~~~l~~~l~~~~~~~~~~d~vI~D-~~~~~~~~vA~~lgiP~v~f~~~ 128 (216)
.......+.++.+.+. + .+||+||+| .+..|+..+|+++|||++.+.+.
T Consensus 100 ~~~~~~~~~~l~~~l~-~-~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~ 149 (415)
T 3rsc_A 100 LRENVSVLRATAEALD-G-DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAA 149 (415)
T ss_dssp HHHHHHHHHHHHHHHS-S-SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESS
T ss_pred HHHHHHHHHHHHHHHh-c-cCCCEEEECchhhhHHHHHHHHhCCCEEEEEec
Confidence 2222223344444332 3 257999999 77888889999999999998743
No 13
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.34 E-value=5.7e-12 Score=106.29 Aligned_cols=125 Identities=10% Similarity=0.060 Sum_probs=81.5
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccCCCCCCC-------Ccc-c-CC--HH
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISDGFDEGG-------YAQ-A-KN--ED 71 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~~~~~~~-------~~~-~-~~--~~ 71 (216)
.||++++.++.||++|++.|++.|+++||+|+++++......+...+++++.++....... ... . .+ ..
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGVGLPAVATTDLPIRHFITTDREGRPEAIPSDPVAQ 80 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEESCSSCHHHHHHBCTTSCBCCCCCSHHHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhCCCEEEEeCCcchHHHHhhhcccCccccCcchHHH
Confidence 3899999999999999999999999999999999987654433335778887764220000 000 0 11 11
Q ss_pred HHH-HH-HHHhhhHHHHHHHHHhhcCCCCceEEEeCCCCccHHHHHHHhCCCceeecccc
Q 042896 72 LYL-KS-FEDNGSRTLSELIKRYKNSSFPVNCVVYDSFLPWALDVAKEYGLYGAAFFTNS 129 (216)
Q Consensus 72 ~~~-~~-~~~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~ 129 (216)
..+ .. +...+...+.++.+.+.+ .+||+||+|.+..|+..+|+++|||.+.++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~ 138 (384)
T 2p6p_A 81 ARFTGRWFARMAASSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDA 138 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccCC
Confidence 111 11 111112223344333322 257999999988888899999999999887543
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.32 E-value=4.6e-12 Score=109.12 Aligned_cols=125 Identities=13% Similarity=0.146 Sum_probs=84.8
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccCCCCCCCCc-c---------------
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISDGFDEGGYA-Q--------------- 66 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~--------------- 66 (216)
.||++++.++.||++|++.||++|.++||+|+++++....+.+...+++++.++...+..+.. .
T Consensus 21 mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (441)
T 2yjn_A 21 MRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAGLTAVPVGTDVDLVDFMTHAGHDIIDYVRSLDFS 100 (441)
T ss_dssp CEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTTTCCEEECSCCCCHHHHHHHTTHHHHHHHTTCCCT
T ss_pred cEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhCCCceeecCCccchHHHhhhhhccccccccccccc
Confidence 589999999999999999999999999999999999876555555788998887432100000 0
Q ss_pred ---c--CCHHHH---HHHHHHh----h-hH-HHHHHHHHhhcCCCCceEEEeCCCCccHHHHHHHhCCCceeecccc
Q 042896 67 ---A--KNEDLY---LKSFEDN----G-SR-TLSELIKRYKNSSFPVNCVVYDSFLPWALDVAKEYGLYGAAFFTNS 129 (216)
Q Consensus 67 ---~--~~~~~~---~~~~~~~----~-~~-~l~~~l~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~ 129 (216)
. .....+ ...+... . .. .+.++++.+.+ .+||+||+|.+..|+..+|+++|||.+.+....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~aA~~lgiP~v~~~~~~ 175 (441)
T 2yjn_A 101 ERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK--WRPDLVIWEPLTFAAPIAAAVTGTPHARLLWGP 175 (441)
T ss_dssp TCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHHTCCEEEECSSC
T ss_pred ccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh--cCCCEEEecCcchhHHHHHHHcCCCEEEEecCC
Confidence 0 011111 1112111 0 12 44555443322 257999999988888999999999999986544
No 15
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.30 E-value=1.6e-11 Score=104.20 Aligned_cols=121 Identities=17% Similarity=0.211 Sum_probs=82.0
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccCCCCC--------------------
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISDGFDE-------------------- 61 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~~~~~-------------------- 61 (216)
..||+++..++.||++|++.|++.|.++||+|+++++ .....+...+++++.++....-
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAETVAT 98 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTTTCEEEESSTTCCHHHHHHHHHHHCHHHHHTGGG
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhCCCeeEecCCccCHHHHhhhcccCCccccccccC
Confidence 3589999999999999999999999999999999998 5544454578888887642110
Q ss_pred CCCcccCCHHHHHHHHHHhhhHHHHHHHHHhhcCCCCceEEEeCCCCccHHHHHHHhCCCceeeccc
Q 042896 62 GGYAQAKNEDLYLKSFEDNGSRTLSELIKRYKNSSFPVNCVVYDSFLPWALDVAKEYGLYGAAFFTN 128 (216)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~ 128 (216)
............+......+...+.+++++. +||+||+|....++..+|+++|||++.....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~ 160 (398)
T 3oti_A 99 RPAIDLEEWGVQIAAVNRPLVDGTMALVDDY-----RPDLVVYEQGATVGLLAADRAGVPAVQRNQS 160 (398)
T ss_dssp SCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHTCCEEEECCT
T ss_pred ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEECchhhHHHHHHHHcCCCEEEEecc
Confidence 0000011111111222222233444444443 4799999988878889999999999987654
No 16
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.24 E-value=7.3e-12 Score=106.83 Aligned_cols=124 Identities=16% Similarity=0.158 Sum_probs=79.3
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccCCCCCCCCcccCCHHHHHHHHHHhhh
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISDGFDEGGYAQAKNEDLYLKSFEDNGS 82 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (216)
.||++++.+..||++|++.||+.|.++||+|+++++....+.+...++++..++................+...+.....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVA 80 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHHH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCCceeecCCCHHHHhccccCCHHHHHHHHHHHHH
Confidence 37999999999999999999999999999999999877655554467888887632211000000000000111111112
Q ss_pred HHHHHHHHHhhcCCCCceEEEeCCCCccH---HHHHHHhCCCceeecccch
Q 042896 83 RTLSELIKRYKNSSFPVNCVVYDSFLPWA---LDVAKEYGLYGAAFFTNSA 130 (216)
Q Consensus 83 ~~l~~~l~~~~~~~~~~d~vI~D~~~~~~---~~vA~~lgiP~v~f~~~~a 130 (216)
..++++.+.. .++|+||+|....++ ..+|+++|||++..+.++.
T Consensus 81 ~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~ 127 (404)
T 3h4t_A 81 EWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPD 127 (404)
T ss_dssp HHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGG
T ss_pred HHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCc
Confidence 2233332222 247999999776554 6889999999998776654
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.22 E-value=2.4e-11 Score=102.98 Aligned_cols=126 Identities=13% Similarity=0.164 Sum_probs=80.7
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccCCCCC--------CC--CcccCCHH
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISDGFDE--------GG--YAQAKNED 71 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~~~~~--------~~--~~~~~~~~ 71 (216)
+.||+++..++.||++|++.|++.|.++||+|++++++...+.+...+++++.++..... .+ .....+..
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAGLPFAPTCPSLDMPEVLSWDREGNRTTMPREEK 94 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTTCCEEEEESSCCHHHHHSBCTTSCBCCCCSSHH
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCCCeeEecCCccchHhhhhhhccCcccccccchh
Confidence 468999999999999999999999999999999999876554444467777776521100 00 00000111
Q ss_pred H----HHHHHHHhhhHHHHHHHHHhhcCCCCceEEEeCCCCccHHHHHHHhCCCceeecccc
Q 042896 72 L----YLKSFEDNGSRTLSELIKRYKNSSFPVNCVVYDSFLPWALDVAKEYGLYGAAFFTNS 129 (216)
Q Consensus 72 ~----~~~~~~~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~ 129 (216)
. ....+.......+.++.+.+.+ .+||+||+|....++..+|+.+|||.+.+....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~ 154 (398)
T 4fzr_A 95 PLLEHIGRGYGRLVLRMRDEALALAER--WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRL 154 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEECccccHHHHHHHhhCCCEEEeccCC
Confidence 1 1111211112222333322221 157999999977888899999999999876543
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.16 E-value=6.5e-11 Score=99.94 Aligned_cols=123 Identities=11% Similarity=0.050 Sum_probs=77.3
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEec-cCCC----------CCCCCc-ccC-
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPI-SDGF----------DEGGYA-QAK- 68 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~-~~~~----------~~~~~~-~~~- 68 (216)
+.||+++..++.||++|++.|++.|.++||+|+++++....+.+...+++++.+ .... +..+.. ...
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQRD 80 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHBTCEEEEC--------------CCSCCGGGGCTT
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhCCCceeeecCCccchhhhhhhccccccccccccc
Confidence 468999999999999999999999999999999999876544443356777766 3211 000000 000
Q ss_pred --CHHHHHHHHHHhh-------hHHHHHHHHHhhcCCCCceEEEeCCCCccHHHHHHHhCCCceeecccc
Q 042896 69 --NEDLYLKSFEDNG-------SRTLSELIKRYKNSSFPVNCVVYDSFLPWALDVAKEYGLYGAAFFTNS 129 (216)
Q Consensus 69 --~~~~~~~~~~~~~-------~~~l~~~l~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~ 129 (216)
.....+......+ ...+.+++++. +||+||+|.+..++..+|+++|||.+.+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~ 145 (391)
T 3tsa_A 81 TEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW-----RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGV 145 (391)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHTTCCEEEECCSC
T ss_pred chhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc-----CCCEEEeCcchhHHHHHHHHhCCCEEEEecCC
Confidence 0111111111111 12233333332 47999999877777888999999999885443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.07 E-value=4.4e-10 Score=95.25 Aligned_cols=122 Identities=17% Similarity=0.088 Sum_probs=78.9
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccCCC------------CCCCCc----
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISDGF------------DEGGYA---- 65 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~~~------------~~~~~~---- 65 (216)
+.||+++..++.||++|++.|++.|.++||+|+++++......+...++++..++... ...+..
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPEGLTP 99 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCTTCCH
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhcCCceeecCcccccchhhhhhhhhcccCCccCCh
Confidence 4689999999999999999999999999999999998755433333678888776310 000000
Q ss_pred --ccCCHHHHHHHH-HHhhhHHHHHHHHHhhcCCCCceEEEeCCCCccHHHHHHHhCCCceeeccc
Q 042896 66 --QAKNEDLYLKSF-EDNGSRTLSELIKRYKNSSFPVNCVVYDSFLPWALDVAKEYGLYGAAFFTN 128 (216)
Q Consensus 66 --~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~ 128 (216)
........+... ...+...+.+++++. +||+||+|....++..+|+++|||.+.....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~ 160 (412)
T 3otg_A 100 EQLSELPQIVFGRVIPQRVFDELQPVIERL-----RPDLVVQEISNYGAGLAALKAGIPTICHGVG 160 (412)
T ss_dssp HHHTTSHHHHHHTHHHHHHHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHTCCEEEECCS
T ss_pred hHhhHHHHHHHhccchHHHHHHHHHHHHhc-----CCCEEEECchhhHHHHHHHHcCCCEEEeccc
Confidence 001111111111 111112333444432 5799999987777788899999999887554
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.69 E-value=8.8e-08 Score=80.58 Aligned_cols=116 Identities=15% Similarity=0.100 Sum_probs=67.9
Q ss_pred CCceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecccccc--ccCCCCceEEeccC-CCCCCCCcccCCHHHHHHHH
Q 042896 1 NRRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAK--SICAPHVGVEPISD-GFDEGGYAQAKNEDLYLKSF 77 (216)
Q Consensus 1 ~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~--~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 77 (216)
++.+|++..-..-||++|.+.||+.|.++||+|+|+++....+ .++..+++++.++. +++..+ ....+...+..+
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~--~~~~~~~~~~~~ 78 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKG--LKSLVKAPLELL 78 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC----------------CHHHHH
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCC--HHHHHHHHHHHH
Confidence 4678887765444999999999999999999999999864322 23335778877763 222100 001111111111
Q ss_pred HHhhhHHHHHHHHHhhcCCCCceEEEeCCCCccH--HHHHHHhCCCceee
Q 042896 78 EDNGSRTLSELIKRYKNSSFPVNCVVYDSFLPWA--LDVAKEYGLYGAAF 125 (216)
Q Consensus 78 ~~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~~~~--~~vA~~lgiP~v~f 125 (216)
.. . .....++++. +||+||++...... ...|+.+|||.++.
T Consensus 79 ~~-~-~~~~~~l~~~-----~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 79 KS-L-FQALRVIRQL-----RPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HH-H-HHHHHHHHHH-----CCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HH-H-HHHHHHHHhc-----CCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 11 1 1223444443 47999999765433 45678899999875
No 21
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=97.76 E-value=0.00013 Score=60.32 Aligned_cols=113 Identities=15% Similarity=0.114 Sum_probs=69.0
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecccccc--ccCCCCceEEeccC-CCCCCCCcccCCHHHHHH---H
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAK--SICAPHVGVEPISD-GFDEGGYAQAKNEDLYLK---S 76 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~--~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~---~ 76 (216)
.+|+++.....||..++..|++.|+++||+|++++...... .+...++++..++. +++. ......+. .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~ 80 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRG------KGIKALIAAPLR 80 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTT------CCHHHHHTCHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCc------CccHHHHHHHHH
Confidence 68999986666999999999999999999999998765321 12224677776652 1111 11111110 0
Q ss_pred HHHhhhHHHHHHHHHhhcCCCCceEEEeCCCC--ccHHHHHHHhCCCceeecc
Q 042896 77 FEDNGSRTLSELIKRYKNSSFPVNCVVYDSFL--PWALDVAKEYGLYGAAFFT 127 (216)
Q Consensus 77 ~~~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~--~~~~~vA~~lgiP~v~f~~ 127 (216)
... ....+.+++++. +||+|+++... .++..+++.+|+|.+....
T Consensus 81 ~~~-~~~~l~~~l~~~-----~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 127 (364)
T 1f0k_A 81 IFN-AWRQARAIMKAY-----KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ 127 (364)
T ss_dssp HHH-HHHHHHHHHHHH-----CCSEEEECSSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred HHH-HHHHHHHHHHhc-----CCCEEEEeCCcCchHHHHHHHHcCCCEEEEec
Confidence 001 012233344432 57999998644 2345667889999986543
No 22
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=96.50 E-value=0.054 Score=45.14 Aligned_cols=125 Identities=13% Similarity=0.073 Sum_probs=65.9
Q ss_pred CCceEEEEcCC----C-ccChHHHHHHHHHHHhCCCeEEEEecccccccc--------------------CCCCceEEec
Q 042896 1 NRRHVVLLPYP----S-QGHINPLLQFAKRLASKGVKATLATTHYTAKSI--------------------CAPHVGVEPI 55 (216)
Q Consensus 1 ~~~hv~~~p~p----~-~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~--------------------~~~~i~~~~~ 55 (216)
++.+|+++..- . -|--.-+.+|++.|+++||+|+++++......- ...++++..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 35788888732 2 344556899999999999999999965332110 1145666655
Q ss_pred cCCCCCCCCcccCCHH-HHHHHHHHhhhHHHHHHHHHhhcCCCCceEEEeCCCCc-c-HHHHHHHhCCCceeecc
Q 042896 56 SDGFDEGGYAQAKNED-LYLKSFEDNGSRTLSELIKRYKNSSFPVNCVVYDSFLP-W-ALDVAKEYGLYGAAFFT 127 (216)
Q Consensus 56 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~~-~-~~~vA~~lgiP~v~f~~ 127 (216)
+...-. ......... .+...+... ...+..+++.+.....++|+|.+-.... + +..+++..|+|.+...-
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h 153 (439)
T 3fro_A 81 GGGLLD-SEDVYGPGWDGLIRKAVTF-GRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIH 153 (439)
T ss_dssp ESGGGG-CSSTTCSHHHHHHHHHHHH-HHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEES
T ss_pred cchhcc-ccccccCCcchhhhhhHHH-HHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEec
Confidence 531100 000001111 112222111 1234444554422123589887765433 2 34566778999877543
No 23
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=95.55 E-value=0.065 Score=44.92 Aligned_cols=115 Identities=17% Similarity=0.159 Sum_probs=62.6
Q ss_pred ceEEEEcC---C--------CccChHHHHHHHHHHHhCCCeEEEEeccccccccC----CCCceEEeccCCCCCCCCccc
Q 042896 3 RHVVLLPY---P--------SQGHINPLLQFAKRLASKGVKATLATTHYTAKSIC----APHVGVEPISDGFDEGGYAQA 67 (216)
Q Consensus 3 ~hv~~~p~---p--------~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~ 67 (216)
.+|+++.. | .-|+-..+.+|++.|+++||+|++++......... ..+++++.++..... ... .
T Consensus 21 mkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~-~~~-~ 98 (438)
T 3c48_A 21 MRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYE-GLS-K 98 (438)
T ss_dssp CEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSS-SCC-G
T ss_pred heeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCcc-ccc-h
Confidence 57888874 2 24788899999999999999999998764321111 146777766532111 110 0
Q ss_pred CCHHHHHHHHHHhhhHHHHHHHHH-hhcCCCCceEEEeCCCCc-c-HHHHHHHhCCCceeecc
Q 042896 68 KNEDLYLKSFEDNGSRTLSELIKR-YKNSSFPVNCVVYDSFLP-W-ALDVAKEYGLYGAAFFT 127 (216)
Q Consensus 68 ~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~d~vI~D~~~~-~-~~~vA~~lgiP~v~f~~ 127 (216)
.+....+..+. ..+++. +... ..+|+|++..... + +..+++.+|+|.+...-
T Consensus 99 ~~~~~~~~~~~-------~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h 153 (438)
T 3c48_A 99 EELPTQLAAFT-------GGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAH 153 (438)
T ss_dssp GGGGGGHHHHH-------HHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECS
T ss_pred hHHHHHHHHHH-------HHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEec
Confidence 11111111111 112222 1111 2389988765322 2 23467778999886543
No 24
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=94.06 E-value=0.72 Score=37.91 Aligned_cols=111 Identities=15% Similarity=0.188 Sum_probs=59.4
Q ss_pred CceEEEEcCCCc-cChHHHHHHHHHHHhCCCeEEEEeccccccc-cCCCCceEEeccCCCCCCCCcccCCHHHHHHHHHH
Q 042896 2 RRHVVLLPYPSQ-GHINPLLQFAKRLASKGVKATLATTHYTAKS-ICAPHVGVEPISDGFDEGGYAQAKNEDLYLKSFED 79 (216)
Q Consensus 2 ~~hv~~~p~p~~-GH~~P~l~La~~La~~G~~Vt~it~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (216)
++.+.-..+|.. |.-.-...|++.|+++||+|++++....... ....++.+..++. +. ..........+.
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~--~~--~~~~~~~~~~~~---- 86 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTV--NQ--YSVFQYPPYDLA---- 86 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCC--C------CCSCCHHHH----
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccCCceEEEeccc--cc--ccccccccccHH----
Confidence 456777777765 6778889999999999999999987543211 1114566654431 10 000000000000
Q ss_pred hhhHHHHHHHHHhhcCCCCceEEEeCCCCc--cHHHHHHHh---CCCceeec
Q 042896 80 NGSRTLSELIKRYKNSSFPVNCVVYDSFLP--WALDVAKEY---GLYGAAFF 126 (216)
Q Consensus 80 ~~~~~l~~~l~~~~~~~~~~d~vI~D~~~~--~~~~vA~~l---giP~v~f~ 126 (216)
....+.+++++. ++|+|++....+ +...+++++ ++|.+...
T Consensus 87 -~~~~l~~~l~~~-----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~ 132 (394)
T 2jjm_A 87 -LASKMAEVAQRE-----NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTL 132 (394)
T ss_dssp -HHHHHHHHHHHH-----TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEEC
T ss_pred -HHHHHHHHHHHc-----CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEE
Confidence 012234444432 479998865443 234455554 59987654
No 25
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=92.04 E-value=0.76 Score=37.68 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=31.2
Q ss_pred CceEEEEcC---CC-ccChHHHHHHHHHHHhCCCeEEEEeccccc
Q 042896 2 RRHVVLLPY---PS-QGHINPLLQFAKRLASKGVKATLATTHYTA 42 (216)
Q Consensus 2 ~~hv~~~p~---p~-~GH~~P~l~La~~La~~G~~Vt~it~~~~~ 42 (216)
+.+|+++.. +. -|+-.-+..|++.|+++||+|++++.....
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 64 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPH 64 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTT
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCcc
Confidence 357877762 22 466688999999999999999999986543
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=91.78 E-value=0.48 Score=38.66 Aligned_cols=104 Identities=14% Similarity=0.136 Sum_probs=63.2
Q ss_pred CceEEEEcC--C--CccChHHHHHHHHHHHhCCCeEEEEecccccc---cc-CCCCceEEeccCCCCCCCCcccCCHHHH
Q 042896 2 RRHVVLLPY--P--SQGHINPLLQFAKRLASKGVKATLATTHYTAK---SI-CAPHVGVEPISDGFDEGGYAQAKNEDLY 73 (216)
Q Consensus 2 ~~hv~~~p~--p--~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~---~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 73 (216)
+.+|+++.. + .-|+-.-+..|++.| +||+|++++...... .. ...++.+..++.... . ... .
T Consensus 4 ~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~-~- 73 (394)
T 3okp_A 4 SRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVM---L---PTP-T- 73 (394)
T ss_dssp CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSC---C---SCH-H-
T ss_pred CceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEcccccc---c---cch-h-
Confidence 467888863 3 347888899999999 799999999865542 11 124667766653111 0 011 0
Q ss_pred HHHHHHhhhHHHHHHHHHhhcCCCCceEEEeCCCCc--cHHHHHHHhCCCceeecc
Q 042896 74 LKSFEDNGSRTLSELIKRYKNSSFPVNCVVYDSFLP--WALDVAKEYGLYGAAFFT 127 (216)
Q Consensus 74 ~~~~~~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~~--~~~~vA~~lgiP~v~f~~ 127 (216)
....+.+++++. ++|+|+.....+ +....++++|+|.+++..
T Consensus 74 -------~~~~l~~~~~~~-----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~ 117 (394)
T 3okp_A 74 -------TAHAMAEIIRER-----EIDNVWFGAAAPLALMAGTAKQAGASKVIAST 117 (394)
T ss_dssp -------HHHHHHHHHHHT-----TCSEEEESSCTTGGGGHHHHHHTTCSEEEEEC
T ss_pred -------hHHHHHHHHHhc-----CCCEEEECCcchHHHHHHHHHhcCCCcEEEEe
Confidence 012334444432 479998765443 456778999999655433
No 27
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=90.45 E-value=0.29 Score=45.23 Aligned_cols=117 Identities=15% Similarity=0.177 Sum_probs=61.7
Q ss_pred ceEEEEcCCCc-------------cChHHHH--------HHHHHHHhCCCeEE----EEecccccc----------ccCC
Q 042896 3 RHVVLLPYPSQ-------------GHINPLL--------QFAKRLASKGVKAT----LATTHYTAK----------SICA 47 (216)
Q Consensus 3 ~hv~~~p~p~~-------------GH~~P~l--------~La~~La~~G~~Vt----~it~~~~~~----------~~~~ 47 (216)
.+|+++..-|. |...=.+ +||++|+++||+|| ++|-..... .+..
T Consensus 279 ~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~ 358 (816)
T 3s28_A 279 FNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYD 358 (816)
T ss_dssp CEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECTT
T ss_pred eEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcceeecC
Confidence 46777776653 4455555 58888899999987 776543221 1111
Q ss_pred -CCceEEeccCCCCCC---CCcccCCHHHHHHHHHHhhhHHHHHHHHHhhcCCCCceEEEeCCCC-cc-HHHHHHHhCCC
Q 042896 48 -PHVGVEPISDGFDEG---GYAQAKNEDLYLKSFEDNGSRTLSELIKRYKNSSFPVNCVVYDSFL-PW-ALDVAKEYGLY 121 (216)
Q Consensus 48 -~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~-~~-~~~vA~~lgiP 121 (216)
.+++++.+|-+.... ..-....+..++..+. ...+..+++.. ..+||+|.+-... .+ +..+|+.+|||
T Consensus 359 ~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~---~~~l~~il~~~---~~~PDVIHsH~~~sglva~llar~~gvP 432 (816)
T 3s28_A 359 SEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYT---EDAAVELSKEL---NGKPDLIIGNYSDGNLVASLLAHKLGVT 432 (816)
T ss_dssp CSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHH---HHHHHHHHHHC---SSCCSEEEEEHHHHHHHHHHHHHHHTCC
T ss_pred cCCeEEEEecCCCccccccccccHHHHHHHHHHHH---HHHHHHHHHhc---CCCCeEEEeCCchHHHHHHHHHHHcCCC
Confidence 367777776321110 0111112222222222 12333444332 2358999875322 22 35678889999
Q ss_pred ceee
Q 042896 122 GAAF 125 (216)
Q Consensus 122 ~v~f 125 (216)
.|..
T Consensus 433 ~V~T 436 (816)
T 3s28_A 433 QCTI 436 (816)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 28
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=88.04 E-value=2.3 Score=33.41 Aligned_cols=108 Identities=12% Similarity=0.107 Sum_probs=56.4
Q ss_pred ceEEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEeccccccccCC-----CCceEEeccCCCCCCCCcccCCHHHHHHH
Q 042896 3 RHVVLLPYPSQGHINP-LLQFAKRLASKGVKATLATTHYTAKSICA-----PHVGVEPISDGFDEGGYAQAKNEDLYLKS 76 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P-~l~La~~La~~G~~Vt~it~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (216)
+|||+.- --|--.| +..|++.|.+.| +|+++.+..+.+-... ..+++...... ......+.+.
T Consensus 2 p~ILlTN--DDGi~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~----~~~~v~GTPa---- 70 (251)
T 2wqk_A 2 PTFLLVN--DDGYFSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTD----FYTVIDGTPA---- 70 (251)
T ss_dssp CEEEEEC--SSCTTCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETT----EEEETTCCHH----
T ss_pred CEEEEEc--CCCCCcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcCCCCCceeEEeecc----ceeecCCChH----
Confidence 3455544 2344444 677899998888 5998888766654321 23444443211 0001111111
Q ss_pred HHHhhhHHHHHHHHHhhcCCCCceEEEe----------CCCCccH---HHHHHHhCCCceeeccc
Q 042896 77 FEDNGSRTLSELIKRYKNSSFPVNCVVY----------DSFLPWA---LDVAKEYGLYGAAFFTN 128 (216)
Q Consensus 77 ~~~~~~~~l~~~l~~~~~~~~~~d~vI~----------D~~~~~~---~~vA~~lgiP~v~f~~~ 128 (216)
+.+.--+..+... ++||+||+ |.+++-+ ..-|.-+|||.+.|+-.
T Consensus 71 ------DCV~lal~~~l~~-~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 71 ------DCVHLGYRVILEE-KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp ------HHHHHHHHTTTTT-CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ------HHHhhhhhhhcCC-CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 1111112222222 35799999 4444333 34456789999999753
No 29
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=85.88 E-value=7.2 Score=30.52 Aligned_cols=38 Identities=13% Similarity=-0.060 Sum_probs=34.7
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+++|++.+.++.+|-....-++..|.++|++|.++-..
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 56899999999999999999999999999999988654
No 30
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=84.68 E-value=1.5 Score=35.06 Aligned_cols=86 Identities=21% Similarity=0.119 Sum_probs=50.7
Q ss_pred CCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Q 042896 10 YPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISDGFDEGGYAQAKNEDLYLKSFEDNGSRTLSELI 89 (216)
Q Consensus 10 ~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 89 (216)
--|.||+.=.+.||+.|. +|+|++.......++.-++.+..++. .+.. .+.+++
T Consensus 12 ~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~~g~~v~~l~~----------~d~~------------~~~~~l 65 (282)
T 3hbm_A 12 QIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDEIPYPVYELSS----------ESIY------------ELINLI 65 (282)
T ss_dssp TTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGGCCSCEEECSS----------SCHH------------HHHHHH
T ss_pred CccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHHCCCeEEEcCc----------cCHH------------HHHHHH
Confidence 347799999999999999 79999865432222112333333321 1111 223334
Q ss_pred HHhhcCCCCceEEEeCCCCc---cHHHHHHHhCCCceeec
Q 042896 90 KRYKNSSFPVNCVVYDSFLP---WALDVAKEYGLYGAAFF 126 (216)
Q Consensus 90 ~~~~~~~~~~d~vI~D~~~~---~~~~vA~~lgiP~v~f~ 126 (216)
++. ++|+||.|.+.. |-..+.+..|++.+++-
T Consensus 66 ~~~-----~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iD 100 (282)
T 3hbm_A 66 KEE-----KFELLIIDHYGISVDDEKLIKLETGVKILSFD 100 (282)
T ss_dssp HHH-----TCSEEEEECTTCCHHHHHHHHHHHCCEEEEEC
T ss_pred HhC-----CCCEEEEECCCCCHHHHHHHHHhcCcEEEEEe
Confidence 432 479999998774 33344444688877664
No 31
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=84.58 E-value=0.7 Score=38.91 Aligned_cols=39 Identities=23% Similarity=0.298 Sum_probs=28.2
Q ss_pred CceEEEEcCC-Cc----cChHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 2 RRHVVLLPYP-SQ----GHINPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 2 ~~hv~~~p~p-~~----GH~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
+.+|+++... .. |=.+-+.+||+.|+++||+|++++...
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 4567666533 22 222458999999999999999999853
No 32
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=84.44 E-value=5.1 Score=32.39 Aligned_cols=108 Identities=12% Similarity=0.017 Sum_probs=54.5
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeccccccc----cCCCCceE-EeccCCCCCCCCcccCCHHHHHHH
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASK-GVKATLATTHYTAKS----ICAPHVGV-EPISDGFDEGGYAQAKNEDLYLKS 76 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~-G~~Vt~it~~~~~~~----~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~ 76 (216)
.+|+++.-. .+.......|++.|.++ ||+|.++++...... ....++.+ ..++ +. + ...+....+
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~--~~~~~~~~~-- 76 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLD--VM--Q--ERQALPDLA-- 76 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECC--CC--S--SCCCHHHHH--
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHHcCCCcccccc--cC--C--CCccHHHHH--
Confidence 467777632 22344567889999988 799887766432211 11122322 1222 11 0 111221111
Q ss_pred HHHhhhHHHHHHHHHhhcCCCCceEEEe--CCCCccH-HHHHHHhCCCceeec
Q 042896 77 FEDNGSRTLSELIKRYKNSSFPVNCVVY--DSFLPWA-LDVAKEYGLYGAAFF 126 (216)
Q Consensus 77 ~~~~~~~~l~~~l~~~~~~~~~~d~vI~--D~~~~~~-~~vA~~lgiP~v~f~ 126 (216)
... ...+.+++++. +||+|++ +....|. ..+|+.+|||.+...
T Consensus 77 -~~~-~~~l~~~l~~~-----~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~ 122 (376)
T 1v4v_A 77 -ARI-LPQAARALKEM-----GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVE 122 (376)
T ss_dssp -HHH-HHHHHHHHHHT-----TCSEEEEESSCHHHHHHHHHHHHTTCCEEEET
T ss_pred -HHH-HHHHHHHHHHc-----CCCEEEEeCChHHHHHHHHHHHHhCCCEEEEe
Confidence 111 12334444432 4799887 3333454 466788999987654
No 33
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=83.10 E-value=6.3 Score=31.87 Aligned_cols=35 Identities=14% Similarity=0.124 Sum_probs=25.9
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhCCC-eEEEEecc
Q 042896 4 HVVLLPYPSQGHINPLLQFAKRLASKGV-KATLATTH 39 (216)
Q Consensus 4 hv~~~p~p~~GH~~P~l~La~~La~~G~-~Vt~it~~ 39 (216)
+|+++.. ..++...+..|++.|.++|+ ++.++.+.
T Consensus 2 kIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~~ 37 (384)
T 1vgv_A 2 KVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVTA 37 (384)
T ss_dssp EEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEECC
T ss_pred eEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEcC
Confidence 5777653 34667888999999999994 88776543
No 34
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=83.06 E-value=1.2 Score=36.10 Aligned_cols=51 Identities=14% Similarity=0.270 Sum_probs=35.3
Q ss_pred eEEEEc---CCCccChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEecc
Q 042896 4 HVVLLP---YPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPIS 56 (216)
Q Consensus 4 hv~~~p---~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~ 56 (216)
+|+++. .|.-|.-.-+.+|++.|+++||+|++++....... ..+++++.++
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~--~~~~~v~~~~ 55 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC--PKAFELIQVP 55 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSCC--CTTCEEEECC
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCCC--CCCcEEEEEc
Confidence 466653 24457778899999999999999999997632211 1356666554
No 35
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=83.06 E-value=1.3 Score=37.85 Aligned_cols=116 Identities=16% Similarity=0.063 Sum_probs=63.2
Q ss_pred ceEEEEcC---C------------CccChHHHHHHHHHHHhCCCeEEEEecccccc---c----cC----CCCceEEecc
Q 042896 3 RHVVLLPY---P------------SQGHINPLLQFAKRLASKGVKATLATTHYTAK---S----IC----APHVGVEPIS 56 (216)
Q Consensus 3 ~hv~~~p~---p------------~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~---~----~~----~~~i~~~~~~ 56 (216)
.+|+++.. | .-|.-.-+.+|++.|+++||+|++++...... . .. ..+++++.++
T Consensus 8 MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~ 87 (499)
T 2r60_A 8 KHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIP 87 (499)
T ss_dssp CEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEEC
T ss_pred ceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEec
Confidence 58888874 2 24677889999999999999999998753311 1 11 2467777666
Q ss_pred CCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHhhcCCCCceEEEeCCCC-cc-HHHHHHHhCCCceeecc
Q 042896 57 DGFDEGGYAQAKNEDLYLKSFEDNGSRTLSELIKRYKNSSFPVNCVVYDSFL-PW-ALDVAKEYGLYGAAFFT 127 (216)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~-~~-~~~vA~~lgiP~v~f~~ 127 (216)
..... .. ........+..+ ...+..++++. ..++|+|.+-... .+ +..+++.+|+|.+...-
T Consensus 88 ~~~~~-~~-~~~~~~~~~~~~----~~~l~~~l~~~---~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H 151 (499)
T 2r60_A 88 FGGDK-FL-PKEELWPYLHEY----VNKIINFYREE---GKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGH 151 (499)
T ss_dssp CSCSS-CC-CGGGCGGGHHHH----HHHHHHHHHHH---TCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECS
T ss_pred CCCcC-Cc-CHHHHHHHHHHH----HHHHHHHHHhc---CCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEcc
Confidence 31110 00 000110011111 11233334332 1257988775432 22 23467788999876443
No 36
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=82.71 E-value=1.5 Score=35.12 Aligned_cols=29 Identities=14% Similarity=0.020 Sum_probs=24.9
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEecccc
Q 042896 13 QGHINPLLQFAKRLASKGVKATLATTHYT 41 (216)
Q Consensus 13 ~GH~~P~l~La~~La~~G~~Vt~it~~~~ 41 (216)
-|.-.-...|++.|+++||+|++++....
T Consensus 30 gG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 58 (342)
T 2iuy_A 30 GGIQWVVANLMDGLLELGHEVFLLGAPGS 58 (342)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEESCTTS
T ss_pred ChHHHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 46677899999999999999999987643
No 37
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=80.92 E-value=7.9 Score=30.38 Aligned_cols=94 Identities=10% Similarity=0.035 Sum_probs=51.7
Q ss_pred HHHHHHHHHhCCCeEEEEeccccccccCC-----CCceEEeccCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHhh
Q 042896 19 LLQFAKRLASKGVKATLATTHYTAKSICA-----PHVGVEPISDGFDEGGYAQAKNEDLYLKSFEDNGSRTLSELIKRYK 93 (216)
Q Consensus 19 ~l~La~~La~~G~~Vt~it~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 93 (216)
+..|++.|.+.| +|+++.+..+.+-... ..+++..+..+.. +. ....+. +.+.=-+..+.
T Consensus 17 i~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~~~~---~~-v~GTPa----------DCV~lal~~l~ 81 (251)
T 2phj_A 17 INALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY---TV-IDGTPA----------DCVHLGYRVIL 81 (251)
T ss_dssp HHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE---EE-TTCCHH----------HHHHHHHHTTT
T ss_pred HHHHHHHHHhcC-CEEEEecCCCccCCccceecCCCeEEEEecCCCe---EE-ECCCHH----------HHHHHHHHHhc
Confidence 678999999988 9999998877654422 2345544432210 11 111110 11111222222
Q ss_pred cCCCCceEEEeCC----------CCccH---HHHHHHhCCCceeeccc
Q 042896 94 NSSFPVNCVVYDS----------FLPWA---LDVAKEYGLYGAAFFTN 128 (216)
Q Consensus 94 ~~~~~~d~vI~D~----------~~~~~---~~vA~~lgiP~v~f~~~ 128 (216)
.. ++||+||+-. +++-+ ..-|..+|||.+.|+..
T Consensus 82 ~~-~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 82 EE-KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp TT-CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CC-CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 21 3579999843 33323 23456689999999763
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=80.57 E-value=2.5 Score=34.89 Aligned_cols=39 Identities=21% Similarity=0.117 Sum_probs=30.5
Q ss_pred CceEEEEcCC-C-ccChHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 2 RRHVVLLPYP-S-QGHINPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 2 ~~hv~~~p~p-~-~GH~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
+.+|+++... . -|+-..+..|++.|+++||+|++++...
T Consensus 40 ~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~ 80 (416)
T 2x6q_A 40 GRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEG 80 (416)
T ss_dssp TCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred ccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccC
Confidence 3577766443 2 4788899999999999999999988754
No 39
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=76.62 E-value=17 Score=29.01 Aligned_cols=37 Identities=8% Similarity=0.090 Sum_probs=27.9
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhC-C-CeEEEEeccc
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASK-G-VKATLATTHY 40 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~-G-~~Vt~it~~~ 40 (216)
.+|+++. ...++......+++.|+++ | ++|.++++..
T Consensus 9 mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~ 47 (375)
T 3beo_A 9 LKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQ 47 (375)
T ss_dssp EEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCS
T ss_pred ceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCC
Confidence 5788886 3356777888999999987 5 8887777653
No 40
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=75.95 E-value=3.7 Score=35.81 Aligned_cols=38 Identities=18% Similarity=0.321 Sum_probs=27.9
Q ss_pred CceEEEEcC---CC--ccCh-HHHHHHHHHHHhCCCeEEEEecc
Q 042896 2 RRHVVLLPY---PS--QGHI-NPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 2 ~~hv~~~p~---p~--~GH~-~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+.||+++.+ |. .|=+ .-+-.|+++|+++||+|+++++.
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 468999852 32 1222 45678999999999999999863
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=74.83 E-value=3 Score=35.16 Aligned_cols=37 Identities=19% Similarity=0.326 Sum_probs=27.6
Q ss_pred eEEEEcC---C---CccChHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 4 HVVLLPY---P---SQGHINPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 4 hv~~~p~---p---~~GH~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
+|+++.. | .-|=-.-+..|++.|+++||+|+++++..
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred eEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 6777653 2 12444678899999999999999998753
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=73.23 E-value=3.6 Score=34.69 Aligned_cols=37 Identities=16% Similarity=0.257 Sum_probs=27.2
Q ss_pred eEEEEcC---C--Cc-cChHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 4 HVVLLPY---P--SQ-GHINPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 4 hv~~~p~---p--~~-GH~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
+|+++.. | .. |=-.-+..|++.|+++||+|+++++..
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 2 QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred eEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 6777653 2 12 334567899999999999999999753
No 43
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=72.73 E-value=15 Score=30.62 Aligned_cols=25 Identities=28% Similarity=0.514 Sum_probs=18.1
Q ss_pred CceEEEe--CCCCccHHHHHHHhCCCc
Q 042896 98 PVNCVVY--DSFLPWALDVAKEYGLYG 122 (216)
Q Consensus 98 ~~d~vI~--D~~~~~~~~vA~~lgiP~ 122 (216)
++|.|+. |.....+..+|+++|+|.
T Consensus 75 ~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 75 PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 5788874 444455678889999994
No 44
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=72.69 E-value=4 Score=29.60 Aligned_cols=38 Identities=18% Similarity=0.206 Sum_probs=33.9
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+++|++...++-+|-.-..-++..|..+|++|.++-..
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 56899999999999999999999999999999987543
No 45
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=72.65 E-value=5.2 Score=30.10 Aligned_cols=38 Identities=18% Similarity=-0.044 Sum_probs=34.4
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+.+|++.+.++..|-....-++..|..+|++|.++-..
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 45899999999999999999999999999999987754
No 46
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=72.65 E-value=6.5 Score=27.55 Aligned_cols=38 Identities=13% Similarity=0.074 Sum_probs=33.9
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+++|++...++-+|-.-..=++..|..+|++|..+-..
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 47899999999999999999999999999999987653
No 47
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=68.96 E-value=41 Score=26.64 Aligned_cols=100 Identities=10% Similarity=0.047 Sum_probs=62.4
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeccccccccCC-CCc-eEEeccCCCCCCCCcccCCHHHHHHHHH
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASK--GVKATLATTHYTAKSICA-PHV-GVEPISDGFDEGGYAQAKNEDLYLKSFE 78 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~--G~~Vt~it~~~~~~~~~~-~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (216)
.+|+++-.-+.|-+.-...+.+.|.++ |.+|++++.+.+.+.+.. +.+ ++..++. .. + ....
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p~i~~v~~~~~--~~-~---~~~~-------- 66 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPL--GH-G---ALEI-------- 66 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC-------------CH--------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCccCEEEEecC--Cc-c---ccch--------
Confidence 378898887779998888999999886 999999999876655544 445 3443321 10 0 0000
Q ss_pred HhhhHHHHHHHHHhhcCCCCceEEEeCCCCcc-HHHHHHHhCCCce
Q 042896 79 DNGSRTLSELIKRYKNSSFPVNCVVYDSFLPW-ALDVAKEYGLYGA 123 (216)
Q Consensus 79 ~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~~~-~~~vA~~lgiP~v 123 (216)
..+.++.+.+.+ .++|++| |....+ +..++...|+|..
T Consensus 67 ----~~~~~l~~~l~~--~~~D~vi-d~~~~~~sa~~~~~~~~~~~ 105 (348)
T 1psw_A 67 ----GERRKLGHSLRE--KRYDRAY-VLPNSFKSALVPLFAGIPHR 105 (348)
T ss_dssp ----HHHHHHHHHTTT--TTCSEEE-ECSCCSGGGHHHHHTTCSEE
T ss_pred ----HHHHHHHHHHHh--cCCCEEE-ECCCChHHHHHHHHhCCCEE
Confidence 122344455532 3689888 554433 4567777899973
No 48
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=65.63 E-value=9.4 Score=29.03 Aligned_cols=38 Identities=8% Similarity=-0.069 Sum_probs=34.5
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+.+|++.+.++-.|-+...=++..|..+|++|..+-..
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 46899999999999999999999999999999987654
No 49
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=63.44 E-value=10 Score=27.75 Aligned_cols=36 Identities=25% Similarity=0.424 Sum_probs=28.5
Q ss_pred ceEEEEcCCCccC-----hHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 3 RHVVLLPYPSQGH-----INPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 3 ~hv~~~p~p~~GH-----~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
.+|+++| |.|= -.+..+|++.|.++|.+|.|...+-
T Consensus 24 ~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 4677877 4443 3689999999999999999987763
No 50
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=62.89 E-value=15 Score=26.96 Aligned_cols=42 Identities=17% Similarity=0.086 Sum_probs=31.7
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecccccccc
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSI 45 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~ 45 (216)
.||++.-..+.| ..-..+|.+.|.++|++|.++.|+.-.+.+
T Consensus 6 k~IllgvTGs~a-a~k~~~ll~~L~~~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 6 ENVLICLCGSVN-SINISHYIIELKSKFDEVNVIASTNGRKFI 47 (175)
T ss_dssp CEEEEEECSSGG-GGGHHHHHHHHTTTCSEEEEEECTGGGGGS
T ss_pred CEEEEEEeCHHH-HHHHHHHHHHHHHCCCEEEEEECcCHHHHh
Confidence 466666555544 445899999999999999999998765544
No 51
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=62.06 E-value=7.7 Score=29.03 Aligned_cols=45 Identities=24% Similarity=0.390 Sum_probs=34.0
Q ss_pred HHHHHHHHHhhcCCCCceEEEeCCCCccHHHHHHHhCCCceeecccchhH
Q 042896 83 RTLSELIKRYKNSSFPVNCVVYDSFLPWALDVAKEYGLYGAAFFTNSATV 132 (216)
Q Consensus 83 ~~l~~~l~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~ 132 (216)
+..++.++++.++ ++++||.|.. +.+.|+++|+|.+...++-.+.
T Consensus 129 ~e~~~~i~~l~~~--G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eSI 173 (196)
T 2q5c_A 129 DEITTLISKVKTE--NIKIVVSGKT---VTDEAIKQGLYGETINSGEESL 173 (196)
T ss_dssp GGHHHHHHHHHHT--TCCEEEECHH---HHHHHHHTTCEEEECCCCHHHH
T ss_pred HHHHHHHHHHHHC--CCeEEECCHH---HHHHHHHcCCcEEEEecCHHHH
Confidence 4566777777553 5899999875 6899999999998887754443
No 52
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=59.84 E-value=11 Score=27.64 Aligned_cols=36 Identities=19% Similarity=0.403 Sum_probs=28.2
Q ss_pred ceEEEEcCCCccC-----hHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 3 RHVVLLPYPSQGH-----INPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 3 ~hv~~~p~p~~GH-----~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
.+|+++| |.|= -.+.-+|++.|.++|.+|.|...+-
T Consensus 23 ~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITP--GYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEE--CHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 4677777 4442 3689999999999999999987663
No 53
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=58.99 E-value=15 Score=25.16 Aligned_cols=38 Identities=16% Similarity=0.002 Sum_probs=23.9
Q ss_pred HHHHHHhhcCCCCceEEEeCCCCcc--HHHHHH---HhCCCceee
Q 042896 86 SELIKRYKNSSFPVNCVVYDSFLPW--ALDVAK---EYGLYGAAF 125 (216)
Q Consensus 86 ~~~l~~~~~~~~~~d~vI~D~~~~~--~~~vA~---~lgiP~v~f 125 (216)
++.++.+.+ .+||+||.|..++- +.++++ +.++|.+..
T Consensus 43 ~eAl~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 43 QEALDIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHHHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHHHHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 444444433 36899999999873 345554 457886554
No 54
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=58.59 E-value=8 Score=27.14 Aligned_cols=33 Identities=12% Similarity=0.287 Sum_probs=26.1
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+.||+++- .|++- ..+++.|.++|++|+++...
T Consensus 3 ~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 46788874 35554 78999999999999999874
No 55
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=58.39 E-value=18 Score=29.88 Aligned_cols=101 Identities=14% Similarity=0.088 Sum_probs=52.1
Q ss_pred CCccChHHHHHHHHHHHhCCCeEEEEecccccc-ccCC---CCceEEeccC-CCCCCCCcccCCHHHHHHHHHHhhhHHH
Q 042896 11 PSQGHINPLLQFAKRLASKGVKATLATTHYTAK-SICA---PHVGVEPISD-GFDEGGYAQAKNEDLYLKSFEDNGSRTL 85 (216)
Q Consensus 11 p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~-~~~~---~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (216)
.+.--++=|-.|.++|.++ ++..++.|..... .+.. .++.+. -|+ .+.. . ..+....+.. +...+
T Consensus 17 GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~~~~i~-~~~~~l~~---~-~~~~~~~~~~----~~~~l 86 (385)
T 4hwg_A 17 GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFDDMGIR-KPDYFLEV---A-ADNTAKSIGL----VIEKV 86 (385)
T ss_dssp CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC-CCCC-CCSEECCC---C-CCCSHHHHHH----HHHHH
T ss_pred EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHhhCCCC-CCceecCC---C-CCCHHHHHHH----HHHHH
Confidence 3445566677788888776 8887777754322 1211 111110 111 1111 1 1122222111 12345
Q ss_pred HHHHHHhhcCCCCceEEEe--CCCCccHHHHHHHhCCCceeec
Q 042896 86 SELIKRYKNSSFPVNCVVY--DSFLPWALDVAKEYGLYGAAFF 126 (216)
Q Consensus 86 ~~~l~~~~~~~~~~d~vI~--D~~~~~~~~vA~~lgiP~v~f~ 126 (216)
++++++. +||+|+. |....|+...|.++|||.+.+.
T Consensus 87 ~~~l~~~-----kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~e 124 (385)
T 4hwg_A 87 DEVLEKE-----KPDAVLFYGDTNSCLSAIAAKRRKIPIFHME 124 (385)
T ss_dssp HHHHHHH-----CCSEEEEESCSGGGGGHHHHHHTTCCEEEES
T ss_pred HHHHHhc-----CCcEEEEECCchHHHHHHHHHHhCCCEEEEe
Confidence 5666654 4687654 5556677677889999976654
No 56
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=58.14 E-value=12 Score=27.98 Aligned_cols=36 Identities=25% Similarity=0.424 Sum_probs=28.1
Q ss_pred ceEEEEcCCCccC-----hHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 3 RHVVLLPYPSQGH-----INPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 3 ~hv~~~p~p~~GH-----~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
.+|+++| +.|= -.+.-+|++.|.++|.+|.|...+-
T Consensus 47 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcEEEEc--CchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 4677777 4442 2688999999999999999987663
No 57
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=57.79 E-value=12 Score=28.02 Aligned_cols=36 Identities=19% Similarity=0.398 Sum_probs=28.2
Q ss_pred ceEEEEcCCCccC-----hHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 3 RHVVLLPYPSQGH-----INPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 3 ~hv~~~p~p~~GH-----~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
.+|+++| +.|= -.+.-+|++.|.++|.+|.|...+-
T Consensus 46 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITP--GYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEEC--CchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 4677777 4443 3688999999999999999987763
No 58
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=56.79 E-value=9.5 Score=31.62 Aligned_cols=36 Identities=14% Similarity=0.238 Sum_probs=24.7
Q ss_pred CceEEEEc---CCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 2 RRHVVLLP---YPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 2 ~~hv~~~p---~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+.+|+++. +| .+.-.-...+++.|+++| +|++++..
T Consensus 14 ~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 14 RPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 35788887 55 332223456888999999 99999543
No 59
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=56.28 E-value=13 Score=30.31 Aligned_cols=102 Identities=12% Similarity=0.035 Sum_probs=65.9
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeccccccccCC-CCce-EEeccCCCCCCCCcccCCHHHHHHHH
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASK--GVKATLATTHYTAKSICA-PHVG-VEPISDGFDEGGYAQAKNEDLYLKSF 77 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~--G~~Vt~it~~~~~~~~~~-~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (216)
..+|+++-.-+.|-+.-...+.+.|.++ +.+|++++.+.+.+.++. +.|+ ++.++.. + ... .+
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~----~------~~~---~~ 74 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELIVVDKK----G------RHN---SI 74 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCSEEEEECCS----S------HHH---HH
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCccEEEEeCcc----c------ccc---cH
Confidence 4689999999999999999999999986 899999999988776654 6664 5544310 0 000 01
Q ss_pred HHhhhHHHHHHHHHhhcCCCCc-eEEEeCCCCccHHHHHHHhCCCce
Q 042896 78 EDNGSRTLSELIKRYKNSSFPV-NCVVYDSFLPWALDVAKEYGLYGA 123 (216)
Q Consensus 78 ~~~~~~~l~~~l~~~~~~~~~~-d~vI~D~~~~~~~~vA~~lgiP~v 123 (216)
. .+.++++++.+ +++ |++|.=....-+..++...|+|..
T Consensus 75 ~-----~~~~l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~r 114 (349)
T 3tov_A 75 S-----GLNEVAREINA--KGKTDIVINLHPNERTSYLAWKIHAPIT 114 (349)
T ss_dssp H-----HHHHHHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEE
T ss_pred H-----HHHHHHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeE
Confidence 0 12233334432 258 887742223334567788899853
No 60
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=55.36 E-value=13 Score=27.30 Aligned_cols=36 Identities=17% Similarity=0.456 Sum_probs=28.5
Q ss_pred ceEEEEcCCCccC-----hHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 3 RHVVLLPYPSQGH-----INPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 3 ~hv~~~p~p~~GH-----~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
.+|+++| |.|= -.+..+|++.|.++|.+|.|...+-
T Consensus 31 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITP--GYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp SEEEEEC--SBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 4677777 4443 2689999999999999999987764
No 61
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=55.17 E-value=13 Score=28.54 Aligned_cols=41 Identities=22% Similarity=0.314 Sum_probs=32.4
Q ss_pred hHHHHHHHHHhhcCCCCceEEEeCCCCccHHHHHHHhCCCceeecc
Q 042896 82 SRTLSELIKRYKNSSFPVNCVVYDSFLPWALDVAKEYGLYGAAFFT 127 (216)
Q Consensus 82 ~~~l~~~l~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~ 127 (216)
.+..++.++++.++ ++++||.|.. +.+.|+++|+|.+...+
T Consensus 140 ~ee~~~~i~~l~~~--G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKAN--GTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHHT--TCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHHC--CCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 35667777777653 5899999875 58999999999988874
No 62
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=54.51 E-value=17 Score=27.58 Aligned_cols=41 Identities=10% Similarity=0.053 Sum_probs=31.8
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecccccc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAK 43 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~ 43 (216)
+.||++--..+.|-+. ..+|.+.|.++|++|.++.|+....
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~ 44 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQL 44 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHH
Confidence 4567766666666554 8999999999999999999976544
No 63
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=53.68 E-value=70 Score=27.15 Aligned_cols=76 Identities=20% Similarity=0.147 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHhhcCCC
Q 042896 18 PLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISDGFDEGGYAQAKNEDLYLKSFEDNGSRTLSELIKRYKNSSF 97 (216)
Q Consensus 18 P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 97 (216)
-.+.|++.|.+.|.+|..+.+.......... +.... ...|. ..+++++++.
T Consensus 324 ~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~-----------~~~~v-~~~D~------------~~le~~i~~~----- 374 (458)
T 3pdi_B 324 LLLGFDALLRSMGAHTVAAVVPARAAALVDS-----------PLPSV-RVGDL------------EDLEHAARAG----- 374 (458)
T ss_dssp HHHHHHHHHHTTTCEEEEEEESSCCSCCTTT-----------TSSCE-EESHH------------HHHHHHHHHH-----
T ss_pred HHHHHHHHHHHCCCEEEEEEECCCChhhhhC-----------ccCcE-EeCCH------------HHHHHHHHhc-----
Confidence 3457788888899998887776532211110 00000 00111 1244555543
Q ss_pred CceEEEeCCCCccHHHHHHHhCCCceee
Q 042896 98 PVNCVVYDSFLPWALDVAKEYGLYGAAF 125 (216)
Q Consensus 98 ~~d~vI~D~~~~~~~~vA~~lgiP~v~f 125 (216)
++|++|.... ...+|+++|||.+.+
T Consensus 375 ~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 375 QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 5799999754 678999999998853
No 64
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=53.52 E-value=67 Score=23.94 Aligned_cols=96 Identities=11% Similarity=0.112 Sum_probs=58.8
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccc------cccCCCCceEEeccCCCCCCCCcccCCHHHHHHH
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTA------KSICAPHVGVEPISDGFDEGGYAQAKNEDLYLKS 76 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (216)
..|+++.-+|.|=..-.+.+|.+.+.+|.+|-|+..-... ..+..-+++++....++.- ...+...-.
T Consensus 29 g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L~v~~~~~g~gf~~----~~~~~~~~~-- 102 (196)
T 1g5t_A 29 GIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPHGVEFQVMATGFTW----ETQNREADT-- 102 (196)
T ss_dssp CCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGGTCEEEECCTTCCC----CGGGHHHHH--
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhCCcEEEEccccccc----CCCCcHHHH--
Confidence 4689999999999999999999999999999999653321 0111124677665543321 111111111
Q ss_pred HHHhhhHHHHHHHHHhhcCCCCceEEEeCCCC
Q 042896 77 FEDNGSRTLSELIKRYKNSSFPVNCVVYDSFL 108 (216)
Q Consensus 77 ~~~~~~~~l~~~l~~~~~~~~~~d~vI~D~~~ 108 (216)
......++...+.+. + ..+|+||.|-+.
T Consensus 103 --~~a~~~l~~a~~~l~-~-~~yDlvILDEi~ 130 (196)
T 1g5t_A 103 --AACMAVWQHGKRMLA-D-PLLDMVVLDELT 130 (196)
T ss_dssp --HHHHHHHHHHHHHTT-C-TTCSEEEEETHH
T ss_pred --HHHHHHHHHHHHHHh-c-CCCCEEEEeCCC
Confidence 111334455555443 2 358999999864
No 65
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=52.75 E-value=19 Score=24.89 Aligned_cols=32 Identities=22% Similarity=0.190 Sum_probs=23.1
Q ss_pred CceEEEeCCCCcc--HHHHHHHh-------CCCceeecccc
Q 042896 98 PVNCVVYDSFLPW--ALDVAKEY-------GLYGAAFFTNS 129 (216)
Q Consensus 98 ~~d~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~~ 129 (216)
+||+||.|..+|- +.++++++ ++|.+.+...+
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 5899999999974 56777654 47877665443
No 66
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=52.75 E-value=27 Score=26.40 Aligned_cols=42 Identities=12% Similarity=0.109 Sum_probs=33.1
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecccccccc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSI 45 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~ 45 (216)
+.||++.-..+.|-+. ..+|.++|.++| +|.++.|+.....+
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 3577777777776655 899999999999 99999998765544
No 67
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=51.87 E-value=24 Score=26.06 Aligned_cols=43 Identities=7% Similarity=0.038 Sum_probs=31.8
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecccccccc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKSI 45 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~ 45 (216)
..||++.-..+.| ..=..+|.+.|.++|++|.++.|+...+.+
T Consensus 2 ~k~IllgvTGs~a-a~k~~~l~~~L~~~g~~V~vv~T~~A~~fi 44 (181)
T 1g63_A 2 YGKLLICATASIN-VININHYIVELKQHFDEVNILFSPSSKNFI 44 (181)
T ss_dssp CCCEEEEECSCGG-GGGHHHHHHHHTTTSSCEEEEECGGGGGTS
T ss_pred CCEEEEEEECHHH-HHHHHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 3466665555544 446789999999999999999998765444
No 68
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=51.56 E-value=23 Score=26.82 Aligned_cols=45 Identities=18% Similarity=0.171 Sum_probs=30.7
Q ss_pred HHHHHHHHHhhcCC--CCceEEEeCCCCccHHHHHHHhCCCceeecc
Q 042896 83 RTLSELIKRYKNSS--FPVNCVVYDSFLPWALDVAKEYGLYGAAFFT 127 (216)
Q Consensus 83 ~~l~~~l~~~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~ 127 (216)
..++.+++++.+.. -.+.+||+|---.-+...|+++|||.+.+..
T Consensus 19 snl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~ 65 (209)
T 4ds3_A 19 SNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKR 65 (209)
T ss_dssp HHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCc
Confidence 35666777664321 1367899986444467899999999988754
No 69
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=51.56 E-value=23 Score=27.20 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=34.0
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
+.+|++.--||.|=..-++.+|..|+++|++|.++....
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 346888888899999999999999999999998887754
No 70
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=51.51 E-value=15 Score=25.71 Aligned_cols=35 Identities=14% Similarity=0.070 Sum_probs=26.1
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecccc
Q 042896 4 HVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYT 41 (216)
Q Consensus 4 hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~ 41 (216)
+++++. +-.=+.|++.+++.|.++|.+|+++ ...+
T Consensus 20 ~~llIa--GG~GiaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 20 KILAIG--AYTGIVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp EEEEEE--ETTHHHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred eEEEEE--CcCcHHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 455555 2223789999999999999999998 5433
No 71
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=50.60 E-value=24 Score=26.72 Aligned_cols=46 Identities=13% Similarity=0.036 Sum_probs=32.1
Q ss_pred HHHHHHHHHhhcCC--CCceEEEeCCCCccHHHHHHHhCCCceeeccc
Q 042896 83 RTLSELIKRYKNSS--FPVNCVVYDSFLPWALDVAKEYGLYGAAFFTN 128 (216)
Q Consensus 83 ~~l~~~l~~~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~ 128 (216)
..++.++++..... ..+.+||+|---..+...|+++|||.+.+.+.
T Consensus 14 snl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~ 61 (211)
T 3p9x_A 14 TNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPK 61 (211)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGG
T ss_pred hHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChh
Confidence 35677776653321 14679999965555678999999999887653
No 72
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=49.38 E-value=25 Score=26.44 Aligned_cols=41 Identities=24% Similarity=0.196 Sum_probs=30.8
Q ss_pred ceEEEEcCCCccChH-HHHHHHHHHHhCCCeEEEEeccccccc
Q 042896 3 RHVVLLPYPSQGHIN-PLLQFAKRLASKGVKATLATTHYTAKS 44 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~-P~l~La~~La~~G~~Vt~it~~~~~~~ 44 (216)
.||++--. |-+... =..+|.+.|.++|++|.++.|+.....
T Consensus 8 k~I~lgiT-Gs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~ 49 (201)
T 3lqk_A 8 KHVGFGLT-GSHCTYHEVLPQMERLVELGAKVTPFVTHTVQTT 49 (201)
T ss_dssp CEEEEECC-SCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCCT
T ss_pred CEEEEEEE-ChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHHH
Confidence 46655544 446666 789999999999999999998865543
No 73
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=49.23 E-value=11 Score=29.48 Aligned_cols=32 Identities=22% Similarity=0.368 Sum_probs=22.8
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 4 HVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 4 hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+|++.- +.|.+- -+|+++|.++||+|+.++-.
T Consensus 2 kILVTG--atGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 2 RVLVGG--GTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp EEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred EEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 455543 445543 46899999999999998753
No 74
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=48.14 E-value=11 Score=32.56 Aligned_cols=33 Identities=15% Similarity=0.307 Sum_probs=25.6
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
|+|||++--..-| +.+|++|.++|++||+|...
T Consensus 42 KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 42 KPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 6799998643223 57899999999999999754
No 75
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=47.82 E-value=38 Score=22.01 Aligned_cols=42 Identities=12% Similarity=0.240 Sum_probs=26.0
Q ss_pred HHHHHHhhcCCCCceEEEeCCCCcc--HHHHHHHh-------CCCceeecccc
Q 042896 86 SELIKRYKNSSFPVNCVVYDSFLPW--ALDVAKEY-------GLYGAAFFTNS 129 (216)
Q Consensus 86 ~~~l~~~~~~~~~~d~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~~ 129 (216)
++.++.+.+ .+||+||.|..++- +.++.+++ ++|.+++....
T Consensus 36 ~~al~~l~~--~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 36 QIALEKLSE--FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHHHHTT--BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHHHHh--cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 444444432 35899999998763 45666554 47777665543
No 76
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=47.34 E-value=12 Score=27.64 Aligned_cols=18 Identities=28% Similarity=0.336 Sum_probs=16.0
Q ss_pred HHHHHHHHhCCCeEEEEe
Q 042896 20 LQFAKRLASKGVKATLAT 37 (216)
Q Consensus 20 l~La~~La~~G~~Vt~it 37 (216)
+-+|..|+++|++|+++=
T Consensus 15 L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCCEEEEE
Confidence 678999999999999984
No 77
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=46.95 E-value=29 Score=26.34 Aligned_cols=45 Identities=11% Similarity=0.166 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhcC-CCCceEEEeCCCCccHHHHHHHhCCCceeecc
Q 042896 83 RTLSELIKRYKNS-SFPVNCVVYDSFLPWALDVAKEYGLYGAAFFT 127 (216)
Q Consensus 83 ~~l~~~l~~~~~~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~ 127 (216)
..++.+++++... ...+.+||+|---..+...|+++|||.+.+..
T Consensus 17 snl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~ 62 (215)
T 3tqr_A 17 TNLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIPH 62 (215)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 3556666665432 11367899986555567899999999988754
No 78
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=45.34 E-value=26 Score=26.53 Aligned_cols=39 Identities=8% Similarity=0.051 Sum_probs=27.7
Q ss_pred ceEEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEeccccc
Q 042896 3 RHVVLLPYPSQGHINP-LLQFAKRLASKGVKATLATTHYTA 42 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P-~l~La~~La~~G~~Vt~it~~~~~ 42 (216)
.||++.-..+ +...- ..+|.+.|.++|++|.++.|+...
T Consensus 6 k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 6 KRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp CEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 4666554443 55554 789999999999999999988654
No 79
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=45.17 E-value=35 Score=25.69 Aligned_cols=44 Identities=20% Similarity=0.218 Sum_probs=30.4
Q ss_pred HHHHHHHHhhcC--CCCceEEEeCCCCccHHHHHHHhCCCceeecc
Q 042896 84 TLSELIKRYKNS--SFPVNCVVYDSFLPWALDVAKEYGLYGAAFFT 127 (216)
Q Consensus 84 ~l~~~l~~~~~~--~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~ 127 (216)
.++.+++++... ...+.+||++.--..+...|+++|||.+.+.+
T Consensus 13 ~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~ 58 (209)
T 1meo_A 13 NLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINH 58 (209)
T ss_dssp THHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECc
Confidence 355566554322 12367899998666677889999999987654
No 80
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=44.20 E-value=41 Score=25.43 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=21.6
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 042896 4 HVVLLPYPSQGHINPLLQFAKRLASKGVKATLAT 37 (216)
Q Consensus 4 hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it 37 (216)
+.+++.-.+.| -=.++|++|+++|++|.++.
T Consensus 14 k~vlITGas~g---iG~~ia~~l~~~G~~v~~~~ 44 (256)
T 3ezl_A 14 RIAYVTGGMGG---IGTSICQRLHKDGFRVVAGC 44 (256)
T ss_dssp EEEEETTTTSH---HHHHHHHHHHHTTEEEEEEE
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCEEEEEe
Confidence 45555533332 23689999999999998765
No 81
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=44.19 E-value=34 Score=25.80 Aligned_cols=44 Identities=14% Similarity=0.094 Sum_probs=28.7
Q ss_pred HHHHHHHhhcC--CCCceEEEeCCCCccHHHHHHHhCCCceeeccc
Q 042896 85 LSELIKRYKNS--SFPVNCVVYDSFLPWALDVAKEYGLYGAAFFTN 128 (216)
Q Consensus 85 l~~~l~~~~~~--~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~ 128 (216)
++.+++++.+. ...+.+||++---..+...|+++|||.+.+.+.
T Consensus 17 ~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~ 62 (212)
T 3av3_A 17 FQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPK 62 (212)
T ss_dssp HHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcc
Confidence 44555555432 123567898854445678899999999876543
No 82
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=43.64 E-value=30 Score=26.30 Aligned_cols=45 Identities=20% Similarity=0.347 Sum_probs=30.3
Q ss_pred HHHHHHHHHhhcCC--CCceEEEeCCCCccHHHHHHHhCCCceeecc
Q 042896 83 RTLSELIKRYKNSS--FPVNCVVYDSFLPWALDVAKEYGLYGAAFFT 127 (216)
Q Consensus 83 ~~l~~~l~~~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~ 127 (216)
..++.+++++.+.. -.+.+||+|---.-+...|+++|||.+.+-.
T Consensus 20 snl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~ 66 (215)
T 3kcq_A 20 SNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKR 66 (215)
T ss_dssp HHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCB
T ss_pred HHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 35666777664321 1367899986444467899999999987644
No 83
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=42.99 E-value=29 Score=30.63 Aligned_cols=38 Identities=8% Similarity=-0.108 Sum_probs=34.6
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+.+|++.+.++-.|-+...-++..|..+|++|..+-..
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~ 135 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVM 135 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSS
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCC
Confidence 46899999999999999999999999999999987654
No 84
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=42.89 E-value=44 Score=25.23 Aligned_cols=45 Identities=13% Similarity=0.223 Sum_probs=29.4
Q ss_pred HHHHHHHHhhcCCC--CceEEEeCCCCccHHHHHHHhCCCceeeccc
Q 042896 84 TLSELIKRYKNSSF--PVNCVVYDSFLPWALDVAKEYGLYGAAFFTN 128 (216)
Q Consensus 84 ~l~~~l~~~~~~~~--~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~ 128 (216)
.++.+++.+.+..- .+.+||++.--..+...|+++|||.+.+...
T Consensus 14 ~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~ 60 (216)
T 2ywr_A 14 NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRK 60 (216)
T ss_dssp HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGG
T ss_pred HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcc
Confidence 34555555543221 3567898865455678899999999876553
No 85
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=42.05 E-value=32 Score=25.76 Aligned_cols=39 Identities=10% Similarity=0.148 Sum_probs=28.9
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEecccccc
Q 042896 4 HVVLLPYPSQGHINPLLQFAKRLASK-GVKATLATTHYTAK 43 (216)
Q Consensus 4 hv~~~p~p~~GH~~P~l~La~~La~~-G~~Vt~it~~~~~~ 43 (216)
+|++--..+.|- .-..+|.+.|.++ |++|.++.|+....
T Consensus 2 ~IllgvTGsiaa-~k~~~ll~~L~~~~g~~V~vv~T~~A~~ 41 (197)
T 1sbz_A 2 KLIVGMTGATGA-PLGVALLQALREMPNVETHLVMSKWAKT 41 (197)
T ss_dssp EEEEEECSSSCH-HHHHHHHHHHHTCTTCEEEEEECHHHHH
T ss_pred EEEEEEeChHHH-HHHHHHHHHHHhccCCEEEEEECchHHH
Confidence 455554445444 4589999999999 99999999876543
No 86
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=40.85 E-value=44 Score=25.18 Aligned_cols=44 Identities=18% Similarity=0.271 Sum_probs=30.4
Q ss_pred HHHHHHHHhhcCC--CCceEEEeCCCCccHHHHHHHhCCCceeecc
Q 042896 84 TLSELIKRYKNSS--FPVNCVVYDSFLPWALDVAKEYGLYGAAFFT 127 (216)
Q Consensus 84 ~l~~~l~~~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~ 127 (216)
.++.+++++.+.. ..+.+||++.--..+...|+++|||.+.+..
T Consensus 13 nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~ 58 (212)
T 1jkx_A 13 NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIA 58 (212)
T ss_dssp HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCG
T ss_pred HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCc
Confidence 4566666654321 1367899987555577899999999988653
No 87
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=40.76 E-value=18 Score=24.86 Aligned_cols=34 Identities=18% Similarity=0.329 Sum_probs=25.1
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
+.||+++-+ |.+ -..+++.|.++|++|+++....
T Consensus 7 ~~~viIiG~---G~~--G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGY---GRV--GSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECc---CHH--HHHHHHHHHHCCCCEEEEECCH
Confidence 357777764 333 3478999999999999997754
No 88
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=40.50 E-value=36 Score=25.61 Aligned_cols=42 Identities=19% Similarity=0.142 Sum_probs=29.9
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEecccccccc
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLAS-KGVKATLATTHYTAKSI 45 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~-~G~~Vt~it~~~~~~~~ 45 (216)
.||++.-..+.| ..-..+|.+.|.+ +|++|.++.|+.....+
T Consensus 20 k~IllgvTGsia-a~k~~~lv~~L~~~~g~~V~vv~T~~A~~fi 62 (206)
T 1qzu_A 20 FHVLVGVTGSVA-ALKLPLLVSKLLDIPGLEVAVVTTERAKHFY 62 (206)
T ss_dssp EEEEEEECSSGG-GGTHHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred CEEEEEEeChHH-HHHHHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence 466666555554 5556999999999 89999999998765544
No 89
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=40.19 E-value=22 Score=27.39 Aligned_cols=21 Identities=29% Similarity=0.264 Sum_probs=18.4
Q ss_pred HHHHHHHHhCCCeEEEEeccc
Q 042896 20 LQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 20 l~La~~La~~G~~Vt~it~~~ 40 (216)
..+|+.++++|++|+++..+.
T Consensus 33 ~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 33 KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHCCCEEEEEeCCc
Confidence 568999999999999998764
No 90
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=39.68 E-value=47 Score=25.96 Aligned_cols=33 Identities=15% Similarity=0.044 Sum_probs=22.1
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 4 HVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 4 hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+++++.-.+.| ==.++|++|+++|++|.++...
T Consensus 50 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 50 RKALVTGGDSG---IGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEECCG
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 45555543332 2368999999999999876543
No 91
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=39.54 E-value=35 Score=27.35 Aligned_cols=34 Identities=9% Similarity=0.090 Sum_probs=26.6
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
..||.++-..+.| |-.+|+.|+++|++|+..=..
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 3578888777766 556999999999999987543
No 92
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=39.50 E-value=24 Score=25.02 Aligned_cols=36 Identities=17% Similarity=0.143 Sum_probs=27.0
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccc
Q 042896 4 HVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTA 42 (216)
Q Consensus 4 hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~ 42 (216)
+++++. .|.| +.|++.+++.|.++|.+|+++ ...+.
T Consensus 25 ~~llIa-GG~G-ItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 25 KILAIG-AYTG-IVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp EEEEEE-ETTH-HHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred eEEEEE-ccCc-HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 455554 2344 889999999999989899999 65443
No 93
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=39.49 E-value=51 Score=24.38 Aligned_cols=40 Identities=13% Similarity=0.118 Sum_probs=31.2
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecccccc
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAK 43 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~ 43 (216)
.||++.-..+.|-+ =..+|.+.|.++|++|.++.|+....
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~ 41 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKV 41 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHH
Confidence 36777766666644 57899999999999999999876543
No 94
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=38.51 E-value=40 Score=25.78 Aligned_cols=44 Identities=16% Similarity=0.201 Sum_probs=28.1
Q ss_pred HHHHHHHhhcCC--CCceEEEeCCCCccHHHHHHHhCCCceeeccc
Q 042896 85 LSELIKRYKNSS--FPVNCVVYDSFLPWALDVAKEYGLYGAAFFTN 128 (216)
Q Consensus 85 l~~~l~~~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~ 128 (216)
++.+++.+.+.. ..+.+||++.--..+...|+++|||.+.+...
T Consensus 36 ~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~ 81 (229)
T 3auf_A 36 LQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPA 81 (229)
T ss_dssp HHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGG
T ss_pred HHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcc
Confidence 344455443321 13568898854445678899999999876543
No 95
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=37.38 E-value=25 Score=29.05 Aligned_cols=108 Identities=7% Similarity=-0.006 Sum_probs=55.0
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEecccccc---c-cCCCCceE-EeccCCCCCCCCcccCCHHHHHHH
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASK-GVKATLATTHYTAK---S-ICAPHVGV-EPISDGFDEGGYAQAKNEDLYLKS 76 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~-G~~Vt~it~~~~~~---~-~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~ 76 (216)
.+|+++. ......+=+..|.++|.++ |+++.++.|..... . +..-+|+. ..+. +. ....+....+
T Consensus 26 ~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~--~~----~~~~~~~~~~-- 96 (396)
T 3dzc_A 26 KKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLN--IM----EPGQTLNGVT-- 96 (396)
T ss_dssp EEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECC--CC----CTTCCHHHHH--
T ss_pred CeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeee--cC----CCCCCHHHHH--
Confidence 3566655 3445677778889999887 78887666643321 1 00011110 0111 10 0111222211
Q ss_pred HHHhhhHHHHHHHHHhhcCCCCceEEEe--CCCCccH-HHHHHHhCCCceeec
Q 042896 77 FEDNGSRTLSELIKRYKNSSFPVNCVVY--DSFLPWA-LDVAKEYGLYGAAFF 126 (216)
Q Consensus 77 ~~~~~~~~l~~~l~~~~~~~~~~d~vI~--D~~~~~~-~~vA~~lgiP~v~f~ 126 (216)
.. ....+.+++++. +||+|+. |....|+ ...|+++|||.+.+.
T Consensus 97 -~~-~~~~l~~~l~~~-----kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ 142 (396)
T 3dzc_A 97 -SK-ILLGMQQVLSSE-----QPDVVLVHGDTATTFAASLAAYYQQIPVGHVE 142 (396)
T ss_dssp -HH-HHHHHHHHHHHH-----CCSEEEEETTSHHHHHHHHHHHTTTCCEEEET
T ss_pred -HH-HHHHHHHHHHhc-----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 11 123455556554 4687765 3444455 467788999987653
No 96
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=37.29 E-value=33 Score=25.57 Aligned_cols=41 Identities=7% Similarity=-0.007 Sum_probs=30.3
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccccc
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYTAKS 44 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~~~~ 44 (216)
.||++.-..+.|=+ =..+|.+.|.++|++|.++.|+.....
T Consensus 9 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~f 49 (194)
T 1p3y_1 9 KKLLIGICGSISSV-GISSYLLYFKSFFKEIRVVMTKTAEDL 49 (194)
T ss_dssp CEEEEEECSCGGGG-GTHHHHHHHTTTSSEEEEEECHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHH
Confidence 46666555554444 578999999999999999999765443
No 97
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=37.11 E-value=57 Score=23.36 Aligned_cols=41 Identities=17% Similarity=0.316 Sum_probs=30.3
Q ss_pred EEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEecccccccc
Q 042896 5 VVLLPYPSQGHINP-LLQFAKRLASKGVKATLATTHYTAKSI 45 (216)
Q Consensus 5 v~~~p~p~~GH~~P-~l~La~~La~~G~~Vt~it~~~~~~~~ 45 (216)
++++-.|-.-=.+| .+-|+..|-.+||+|++..++.....+
T Consensus 10 LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLl 51 (157)
T 1kjn_A 10 LMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLV 51 (157)
T ss_dssp EEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred eEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhe
Confidence 45555665544455 688999999999999999998765543
No 98
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=36.96 E-value=62 Score=21.42 Aligned_cols=32 Identities=16% Similarity=0.174 Sum_probs=21.2
Q ss_pred CceEEEeCCCCcc--HHHHHHHh-------CCCceeecccc
Q 042896 98 PVNCVVYDSFLPW--ALDVAKEY-------GLYGAAFFTNS 129 (216)
Q Consensus 98 ~~d~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~~ 129 (216)
+||+||.|..++- +.++.+++ ++|.+++....
T Consensus 48 ~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 48 LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 5899999998763 44555433 57777665543
No 99
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=36.30 E-value=45 Score=23.17 Aligned_cols=32 Identities=16% Similarity=0.280 Sum_probs=23.7
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
.+|+++- .|.+- ..+++.|.++|++|+++...
T Consensus 20 ~~v~IiG---~G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 20 KYIVIFG---CGRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEC---CCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 4677774 35443 45789999999999998764
No 100
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=35.87 E-value=74 Score=27.61 Aligned_cols=45 Identities=33% Similarity=0.523 Sum_probs=31.6
Q ss_pred ChHHHHHHHHHHHhCCCeEEEEeccccccccCCCCceEEeccC--CCCC
Q 042896 15 HINPLLQFAKRLASKGVKATLATTHYTAKSICAPHVGVEPISD--GFDE 61 (216)
Q Consensus 15 H~~P~l~La~~La~~G~~Vt~it~~~~~~~~~~~~i~~~~~~~--~~~~ 61 (216)
+-.-++++|+.|++.|+++ +.|......++..+|....+.+ |+|+
T Consensus 19 DK~glvelAk~L~~lGfeI--~ATgGTak~L~e~GI~v~~V~~vTgfPE 65 (523)
T 3zzm_A 19 DKTGLVDLAQGLSAAGVEI--ISTGSTAKTIADTGIPVTPVEQLTGFPE 65 (523)
T ss_dssp SCTTHHHHHHHHHHTTCEE--EECHHHHHHHHTTTCCCEEHHHHHSCCC
T ss_pred ccccHHHHHHHHHHCCCEE--EEcchHHHHHHHcCCceeeccccCCCch
Confidence 4455889999999999875 5676666666556777666542 5554
No 101
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=35.08 E-value=50 Score=22.16 Aligned_cols=31 Identities=19% Similarity=0.219 Sum_probs=20.8
Q ss_pred CceEEEeCCCCcc--HHHHHHHh---------CCCceeeccc
Q 042896 98 PVNCVVYDSFLPW--ALDVAKEY---------GLYGAAFFTN 128 (216)
Q Consensus 98 ~~d~vI~D~~~~~--~~~vA~~l---------giP~v~f~~~ 128 (216)
++|+||.|..++- +.++.+++ .+|.+++...
T Consensus 58 ~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 58 DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 5899999998763 45555544 2677766543
No 102
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=33.96 E-value=29 Score=28.03 Aligned_cols=22 Identities=9% Similarity=0.022 Sum_probs=18.8
Q ss_pred HHHHHHHHhCCCeEEEEecccc
Q 042896 20 LQFAKRLASKGVKATLATTHYT 41 (216)
Q Consensus 20 l~La~~La~~G~~Vt~it~~~~ 41 (216)
..+|+.++.+|++||+++.+..
T Consensus 69 ~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 69 ATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHCCCEEEEEecCCC
Confidence 4689999999999999998654
No 103
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=32.89 E-value=67 Score=22.97 Aligned_cols=28 Identities=11% Similarity=-0.073 Sum_probs=19.2
Q ss_pred CceEEEeCCCCcc------HHHHHHHhCCCceeec
Q 042896 98 PVNCVVYDSFLPW------ALDVAKEYGLYGAAFF 126 (216)
Q Consensus 98 ~~d~vI~D~~~~~------~~~vA~~lgiP~v~f~ 126 (216)
+| +|+.+.-..+ ...+|+++|+|.+..+
T Consensus 36 rP-vil~G~g~~~~~a~~~l~~lae~~~iPV~~t~ 69 (170)
T 3cf4_G 36 RP-LLMVGTLALDPELLDRVVKISKAANIPIAATG 69 (170)
T ss_dssp SE-EEEECSTTCCHHHHHHHHHHHHHHTCCEEECT
T ss_pred CC-EEEECCCccchhHHHHHHHHHHHhCCCEEECc
Confidence 45 7777764431 3478899999997643
No 104
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=31.52 E-value=50 Score=26.70 Aligned_cols=37 Identities=8% Similarity=0.106 Sum_probs=26.8
Q ss_pred eEEEEc--CCCc-cChHHHHHHHHHHHhCCCeEEEEecccc
Q 042896 4 HVVLLP--YPSQ-GHINPLLQFAKRLASKGVKATLATTHYT 41 (216)
Q Consensus 4 hv~~~p--~p~~-GH~~P~l~La~~La~~G~~Vt~it~~~~ 41 (216)
+|+++. +|.. |.-.-...|++.|+++ |+|++++....
T Consensus 2 kI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~ 41 (413)
T 3oy2_A 2 KLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAF 41 (413)
T ss_dssp EEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCC
T ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCC
Confidence 566653 2333 5556788999999999 99999886543
No 105
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=31.49 E-value=39 Score=27.95 Aligned_cols=109 Identities=10% Similarity=0.012 Sum_probs=53.4
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeccccccccCC---CCceEEeccC-CCCCCCCcccCCHHHHHHH
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASK--GVKATLATTHYTAKSICA---PHVGVEPISD-GFDEGGYAQAKNEDLYLKS 76 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~--G~~Vt~it~~~~~~~~~~---~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~ 76 (216)
.+|+++. ......+=+..|.++|.++ |+++.++.|..... +.. ..+.+. |+ .+.- .....+.....
T Consensus 28 ~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~-m~~~~~~~~~i~--~~~~l~v--~~~~~~~~~~~-- 99 (403)
T 3ot5_A 28 IKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHRE-MLDQVLEIFDIK--PDIDLDI--MKKGQTLAEIT-- 99 (403)
T ss_dssp EEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC------CHHHHHHTTCC--CSEECCC--CC-CCCHHHHH--
T ss_pred ceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHH-HHHHHHHhcCCC--CCccccc--CCCCCCHHHHH--
Confidence 3666665 3344566678889999887 68877666653311 111 001110 11 0110 00111222211
Q ss_pred HHHhhhHHHHHHHHHhhcCCCCceEEEe--CCCCccH-HHHHHHhCCCceeec
Q 042896 77 FEDNGSRTLSELIKRYKNSSFPVNCVVY--DSFLPWA-LDVAKEYGLYGAAFF 126 (216)
Q Consensus 77 ~~~~~~~~l~~~l~~~~~~~~~~d~vI~--D~~~~~~-~~vA~~lgiP~v~f~ 126 (216)
.. ....+.+++++. +||+|+. |....|+ ...|+++|||.+.+.
T Consensus 100 -~~-~~~~l~~~l~~~-----kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 100 -SR-VMNGINEVIAAE-----NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp -HH-HHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred -HH-HHHHHHHHHHHc-----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 11 123455566554 4687765 3344454 567889999987654
No 106
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=31.02 E-value=1.2e+02 Score=23.76 Aligned_cols=52 Identities=17% Similarity=0.088 Sum_probs=35.6
Q ss_pred HHHHHHHHHhhcCCCCceEEEeCCCCcc--HHHHHHHhCCCceeecccchhHHHHH
Q 042896 83 RTLSELIKRYKNSSFPVNCVVYDSFLPW--ALDVAKEYGLYGAAFFTNSATVCNIF 136 (216)
Q Consensus 83 ~~l~~~l~~~~~~~~~~d~vI~D~~~~~--~~~vA~~lgiP~v~f~~~~a~~~~~~ 136 (216)
..+.++++.+.+ .++.||+++....- +..+|++.|++.+.+-+.+...+.++
T Consensus 224 ~~l~~l~~~ik~--~~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~~~Y~~~m 277 (291)
T 1pq4_A 224 QELKQLIDTAKE--NNLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLAADWSSNL 277 (291)
T ss_dssp HHHHHHHHHHHT--TTCCEEEEETTSCCHHHHHHHHHHTCEEEEECTTCSSHHHHH
T ss_pred HHHHHHHHHHHH--cCCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCchhhHHHHH
Confidence 345555555543 35789999987754 56889999999988877765444333
No 107
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=30.79 E-value=1.9e+02 Score=22.51 Aligned_cols=31 Identities=16% Similarity=-0.006 Sum_probs=22.8
Q ss_pred Cce-EEEeCCCCc-cHHHHHHHhCCCceeeccc
Q 042896 98 PVN-CVVYDSFLP-WALDVAKEYGLYGAAFFTN 128 (216)
Q Consensus 98 ~~d-~vI~D~~~~-~~~~vA~~lgiP~v~f~~~ 128 (216)
-|| +||.|.-.. -+..-|.++|||.|.+.-+
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 356 457888653 4667899999999988543
No 108
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=30.04 E-value=36 Score=24.80 Aligned_cols=32 Identities=9% Similarity=0.236 Sum_probs=22.1
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 4 HVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 4 hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+|++.- +.|.+- .+|+++|+++|++|+.+.-.
T Consensus 2 kvlVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIG--ATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred eEEEEc--CCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 344433 344442 57899999999999988754
No 109
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=30.00 E-value=57 Score=20.95 Aligned_cols=42 Identities=17% Similarity=0.347 Sum_probs=25.0
Q ss_pred HHHHHHhhcCCCCceEEEeCCCCcc--HHHHHHH----hCCCceeecccc
Q 042896 86 SELIKRYKNSSFPVNCVVYDSFLPW--ALDVAKE----YGLYGAAFFTNS 129 (216)
Q Consensus 86 ~~~l~~~~~~~~~~d~vI~D~~~~~--~~~vA~~----lgiP~v~f~~~~ 129 (216)
++.++.+.+ .+||+||.|..++- +.++.++ .++|.+++....
T Consensus 36 ~~al~~~~~--~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 36 NEAVEMVEE--LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp HHHHHHHHT--TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred HHHHHHHhh--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 344444432 35899999998763 3444443 367877665443
No 110
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=29.56 E-value=36 Score=25.32 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=22.1
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 4 HVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 4 hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+|++.- +.|.+ =.+++++|+++|++|+.+.-.
T Consensus 23 ~ilVtG--atG~i--G~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 23 RVLVVG--ANGKV--ARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp EEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred eEEEEC--CCChH--HHHHHHHHHhCCCeEEEEECC
Confidence 454443 33443 357899999999999988754
No 111
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=29.37 E-value=43 Score=26.75 Aligned_cols=32 Identities=25% Similarity=0.239 Sum_probs=23.6
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEec
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATT 38 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~ 38 (216)
.++|.++-..+.| ..+|+.|++.||+|+++..
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 3567776544444 4678999999999999865
No 112
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=29.24 E-value=43 Score=25.61 Aligned_cols=21 Identities=24% Similarity=0.324 Sum_probs=17.6
Q ss_pred HHHHHHHHhCCCeEEEEeccc
Q 042896 20 LQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 20 l~La~~La~~G~~Vt~it~~~ 40 (216)
..+|+.|+++|++|+++..+.
T Consensus 38 ~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 38 FAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHCCCEEEEEECCc
Confidence 578999999999999986543
No 113
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=28.85 E-value=44 Score=26.33 Aligned_cols=48 Identities=17% Similarity=0.099 Sum_probs=39.3
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeccccccccCC-CCc
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASK--GVKATLATTHYTAKSICA-PHV 50 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~--G~~Vt~it~~~~~~~~~~-~~i 50 (216)
.+|+++-.-+.|-+.-...+.+.|.++ +.+|++++.+.+.+.+.. +.|
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~p~v 51 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAV 51 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTSTTE
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcCCCC
Confidence 378999888889999999999999886 899999999877655443 454
No 114
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=28.55 E-value=40 Score=22.86 Aligned_cols=32 Identities=9% Similarity=0.126 Sum_probs=24.2
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
.||+++-+ |.+ -..+++.|.++|++|+++...
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 46777754 543 357899999999999988654
No 115
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=28.15 E-value=85 Score=24.85 Aligned_cols=42 Identities=19% Similarity=0.052 Sum_probs=30.0
Q ss_pred HHHHHHHHHhhcCC--CCceEEEeCCCCccHHHHHHHhCCCceeec
Q 042896 83 RTLSELIKRYKNSS--FPVNCVVYDSFLPWALDVAKEYGLYGAAFF 126 (216)
Q Consensus 83 ~~l~~~l~~~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~ 126 (216)
..+++++++..... -.+.+||+|-- -+..+|+++|||...+-
T Consensus 102 ~~l~~ll~~~~~g~l~~~i~~Visn~~--~~~~~A~~~gIp~~~~~ 145 (286)
T 3n0v_A 102 HCLNDLLYRQRIGQLGMDVVAVVSNHP--DLEPLAHWHKIPYYHFA 145 (286)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEEEESSS--TTHHHHHHTTCCEEECC
T ss_pred CCHHHHHHHHHCCCCCcEEEEEEeCcH--HHHHHHHHcCCCEEEeC
Confidence 57888888764321 23678999863 35678999999998764
No 116
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=27.91 E-value=41 Score=24.62 Aligned_cols=20 Identities=5% Similarity=0.056 Sum_probs=17.2
Q ss_pred HHHHHHHHhCCCeEEEEecc
Q 042896 20 LQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 20 l~La~~La~~G~~Vt~it~~ 39 (216)
.+++++|+++|++|+.+.-.
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 14 SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEEec
Confidence 57899999999999988754
No 117
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=27.59 E-value=36 Score=27.16 Aligned_cols=18 Identities=22% Similarity=0.204 Sum_probs=15.7
Q ss_pred HHHHHHHHhCCCeEEEEe
Q 042896 20 LQFAKRLASKGVKATLAT 37 (216)
Q Consensus 20 l~La~~La~~G~~Vt~it 37 (216)
+-+|..|+++|++|+++=
T Consensus 17 l~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 17 STAARYAAKYGLKTLMIE 34 (397)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCcEEEEe
Confidence 568899999999999984
No 118
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=27.48 E-value=94 Score=23.80 Aligned_cols=34 Identities=21% Similarity=0.285 Sum_probs=25.6
Q ss_pred eEEEEcCC--CccChHHHHHHHHHHHhCCCeEEEEe
Q 042896 4 HVVLLPYP--SQGHINPLLQFAKRLASKGVKATLAT 37 (216)
Q Consensus 4 hv~~~p~p--~~GH~~P~l~La~~La~~G~~Vt~it 37 (216)
+.+++.-. +.|=..-.+.|++.|.++|.+|.++=
T Consensus 22 k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 22 HMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp EEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 34444433 44777888999999999999999874
No 119
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=26.87 E-value=88 Score=23.63 Aligned_cols=42 Identities=19% Similarity=-0.003 Sum_probs=28.2
Q ss_pred HHHHHHHHhhcCC-CCceEEEeCCCCccHHHHHHHhCCCceeec
Q 042896 84 TLSELIKRYKNSS-FPVNCVVYDSFLPWALDVAKEYGLYGAAFF 126 (216)
Q Consensus 84 ~l~~~l~~~~~~~-~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~ 126 (216)
.++.++++..+.. -.+.+||++.- -.+...|+++|||.+.+.
T Consensus 25 nl~all~~~~~~~~~eI~~Vis~~~-a~~~~~A~~~gIp~~~~~ 67 (215)
T 3da8_A 25 LLRSLLDAAVGDYPARVVAVGVDRE-CRAAEIAAEASVPVFTVR 67 (215)
T ss_dssp HHHHHHHHSSTTCSEEEEEEEESSC-CHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHhccCCCeEEEEEeCCc-hHHHHHHHHcCCCEEEeC
Confidence 4566666553211 13678999874 335688999999998873
No 120
>3noh_A Putative peptide binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Ruminococcus gnavus}
Probab=26.78 E-value=44 Score=23.00 Aligned_cols=17 Identities=18% Similarity=0.356 Sum_probs=13.6
Q ss_pred HHHHHHHHhCCCeEEEE
Q 042896 20 LQFAKRLASKGVKATLA 36 (216)
Q Consensus 20 l~La~~La~~G~~Vt~i 36 (216)
-.||++|...|.+|++-
T Consensus 78 ~~Lc~RL~~AG~~V~lk 94 (139)
T 3noh_A 78 DSLCERLNDAGADVQIK 94 (139)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhcCCCceec
Confidence 46788888889999974
No 121
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=26.63 E-value=1.3e+02 Score=19.21 Aligned_cols=42 Identities=7% Similarity=0.116 Sum_probs=24.6
Q ss_pred HHHHHHhhcCCCCceEEEeCCCCcc--HHHHHHHh-----CCCceeecccc
Q 042896 86 SELIKRYKNSSFPVNCVVYDSFLPW--ALDVAKEY-----GLYGAAFFTNS 129 (216)
Q Consensus 86 ~~~l~~~~~~~~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~f~~~~ 129 (216)
++.++.+.. .++|+||.|..++. +.++.+++ ++|.+++....
T Consensus 37 ~~~~~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 37 EAFLAFAPD--VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp HHHHHHGGG--CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred HHHHHHHhc--CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 344444432 35799999987753 44454443 57777665443
No 122
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=26.49 E-value=52 Score=26.61 Aligned_cols=23 Identities=9% Similarity=0.237 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhCCCeEEEEecc
Q 042896 17 NPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 17 ~P~l~La~~La~~G~~Vt~it~~ 39 (216)
-+|.+|.+.|.++|++|.++|..
T Consensus 146 ~~~~~l~~~l~~~G~~v~ivSas 168 (327)
T 4as2_A 146 SGQRELYNKLMENGIEVYVISAA 168 (327)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999999999999998864
No 123
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=26.44 E-value=1.2e+02 Score=21.81 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=24.7
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCeEEEEec
Q 042896 5 VVLLPYPSQGHINPLLQFAKRLASKGVKATLATT 38 (216)
Q Consensus 5 v~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~ 38 (216)
|+++. ...|+-.-+..+++.|+++|+.|..+..
T Consensus 35 vv~~H-G~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 35 VIVVQ-EIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEC-CTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred EEEEc-CcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 44444 4557777899999999999998876654
No 124
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=26.44 E-value=53 Score=21.83 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=23.8
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
.+|+++ |.|.+- ..+++.|.++|++|+++...
T Consensus 5 m~i~Ii---G~G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIA---GIGRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEE---CCSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE---CCCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 467777 346654 46789999999999988653
No 125
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=26.37 E-value=1.1e+02 Score=20.92 Aligned_cols=29 Identities=14% Similarity=-0.064 Sum_probs=22.8
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEecccc
Q 042896 13 QGHINPLLQFAKRLASKGVKATLATTHYT 41 (216)
Q Consensus 13 ~GH~~P~l~La~~La~~G~~Vt~it~~~~ 41 (216)
......-+.+|...++.|++|+++-+..-
T Consensus 29 ~~~~~~al~lA~~A~a~g~eV~vFf~~dG 57 (134)
T 3mc3_A 29 LDRTYAPLFMASISASMEYETSVFFMIXG 57 (134)
T ss_dssp THHHHHHHHHHHHHHHTTCEEEEEECTTG
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEeCc
Confidence 35567788899999999999998876543
No 126
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=26.36 E-value=46 Score=23.81 Aligned_cols=32 Identities=13% Similarity=0.225 Sum_probs=22.2
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 4 HVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 4 hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+|++.- +.|-+ =.+++++|+++|++|+.+.-.
T Consensus 5 ~ilVtG--atG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 5 KIAIFG--ATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp EEEEES--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEc--CCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 455543 33433 367899999999999988654
No 127
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=26.00 E-value=1.3e+02 Score=19.53 Aligned_cols=32 Identities=19% Similarity=0.032 Sum_probs=20.2
Q ss_pred CceEEEeCCCCc-------cHHHHHHHh-----CCCceeecccc
Q 042896 98 PVNCVVYDSFLP-------WALDVAKEY-----GLYGAAFFTNS 129 (216)
Q Consensus 98 ~~d~vI~D~~~~-------~~~~vA~~l-----giP~v~f~~~~ 129 (216)
++|+||.|..++ .+.++.+++ ++|.+++....
T Consensus 47 ~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 47 NPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp CEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred CCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 589999998764 233444332 67877765543
No 128
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=25.81 E-value=1.2e+02 Score=19.86 Aligned_cols=32 Identities=16% Similarity=0.250 Sum_probs=20.1
Q ss_pred CCceEEEeCCCCcc--HHHHHHHh-----CCCceeeccc
Q 042896 97 FPVNCVVYDSFLPW--ALDVAKEY-----GLYGAAFFTN 128 (216)
Q Consensus 97 ~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~f~~~ 128 (216)
.++|+||.|..++- +.++.+++ ++|.+++...
T Consensus 48 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 86 (143)
T 3jte_A 48 NSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGH 86 (143)
T ss_dssp TTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECT
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECC
Confidence 35899999987652 34444432 5777666543
No 129
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=25.71 E-value=95 Score=20.21 Aligned_cols=32 Identities=13% Similarity=0.017 Sum_probs=21.0
Q ss_pred CceEEEeCCCCc---cHHHHHHH----hCCCceeecccc
Q 042896 98 PVNCVVYDSFLP---WALDVAKE----YGLYGAAFFTNS 129 (216)
Q Consensus 98 ~~d~vI~D~~~~---~~~~vA~~----lgiP~v~f~~~~ 129 (216)
++|+||.|...+ .+.++.++ .++|.+++....
T Consensus 54 ~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 54 RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 479999998764 23444443 378888776544
No 130
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=25.68 E-value=1e+02 Score=26.13 Aligned_cols=38 Identities=11% Similarity=0.255 Sum_probs=32.8
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecccc
Q 042896 4 HVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHYT 41 (216)
Q Consensus 4 hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~~ 41 (216)
-|+++-.+|.|=..-...||..|+++|.+|.++.....
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~ 139 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTW 139 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCS
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 46677777889999999999999999999999987654
No 131
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=25.51 E-value=61 Score=27.28 Aligned_cols=25 Identities=20% Similarity=0.464 Sum_probs=20.6
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 14 GHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 14 GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
||+.|++.+ ++|.+.||++.++...
T Consensus 47 Gh~v~l~~l-~~lQ~~G~~~i~lIgd 71 (419)
T 2ts1_A 47 GHLATILTM-RRFQQAGHRPIALVGG 71 (419)
T ss_dssp GGHHHHHHH-HHHHHTTCEEEEEECT
T ss_pred HHHHHHHHH-HHHHHCCCcEEEEEcC
Confidence 999987665 6888899999988754
No 132
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=25.37 E-value=1.2e+02 Score=19.75 Aligned_cols=31 Identities=10% Similarity=0.126 Sum_probs=20.1
Q ss_pred CceEEEeCCCCcc--HHHHHHHh-------CCCceeeccc
Q 042896 98 PVNCVVYDSFLPW--ALDVAKEY-------GLYGAAFFTN 128 (216)
Q Consensus 98 ~~d~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~ 128 (216)
++|+||.|..++- +.++.+++ ++|.+++...
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 47 PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 5799999998752 44555443 4677666543
No 133
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A*
Probab=25.08 E-value=59 Score=29.36 Aligned_cols=40 Identities=10% Similarity=0.141 Sum_probs=30.6
Q ss_pred CceEEEEcCCCc---cChHHHHH-HHHHHHh-CCCeEEEEecccc
Q 042896 2 RRHVVLLPYPSQ---GHINPLLQ-FAKRLAS-KGVKATLATTHYT 41 (216)
Q Consensus 2 ~~hv~~~p~p~~---GH~~P~l~-La~~La~-~G~~Vt~it~~~~ 41 (216)
+.||+..|..+. ||..|++. |.+.+.. -||+|+|+.+...
T Consensus 382 ~l~~~~~ps~g~lHLGh~v~~~k~l~~~~~~~~g~~v~ilIaD~~ 426 (690)
T 3p0j_A 382 PHACMWMPALLKVPLDVAEGMIKVTKDFIAAHPEGTVTLVLPDWS 426 (690)
T ss_dssp CEEEEECCCCSSCBHHHHHHHHHHHHHHHHHCSSCEEEEEECTTH
T ss_pred cceEEecCCCCCcccchHHHHHHHHHHHHHHcCCCeEEEEEecch
Confidence 457888886666 89999998 7765544 4899999988754
No 134
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=25.03 E-value=46 Score=26.81 Aligned_cols=29 Identities=28% Similarity=0.334 Sum_probs=21.1
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEE
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLA 36 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~i 36 (216)
.||+++--.--| +-+|..|+++|++|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 466666432223 67889999999999998
No 135
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=24.91 E-value=46 Score=25.71 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=25.4
Q ss_pred ceEEEEcCCCccChH-HHHHHHHHHHhCCCeEEEEecc
Q 042896 3 RHVVLLPYPSQGHIN-PLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~-P~l~La~~La~~G~~Vt~it~~ 39 (216)
.+|+++.-+ |+-- =-+-.||+|+++|++|+++...
T Consensus 59 ~~v~VlcG~--GNNGGDGlv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 59 KHVFVIAGP--GNNGGDGLVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp CEEEEEECS--SHHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEEECC--CCCHHHHHHHHHHHHHCCCeEEEEEcC
Confidence 478887744 3321 1478999999999999997653
No 136
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=24.43 E-value=1.2e+02 Score=20.27 Aligned_cols=42 Identities=12% Similarity=0.079 Sum_probs=24.4
Q ss_pred HHHHHHhhcCCCCceEEEeCCCCcc--HHHHHHHh-----CCCceeecccc
Q 042896 86 SELIKRYKNSSFPVNCVVYDSFLPW--ALDVAKEY-----GLYGAAFFTNS 129 (216)
Q Consensus 86 ~~~l~~~~~~~~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~f~~~~ 129 (216)
++.++.+.. .++|+||.|..++- +.++.+++ ++|.+++....
T Consensus 41 ~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 41 LDALEALKG--TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHHTT--SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
Confidence 444444432 35899999987652 34444332 57777665443
No 137
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=24.37 E-value=71 Score=25.20 Aligned_cols=34 Identities=9% Similarity=0.119 Sum_probs=24.4
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
..+|.++-..+.|- .+|..|+++|++|+++....
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 2 SLRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp --CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT
T ss_pred CCEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc
Confidence 35677776555553 36889999999999987654
No 138
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A
Probab=24.17 E-value=50 Score=27.51 Aligned_cols=27 Identities=30% Similarity=0.351 Sum_probs=21.3
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEecccc
Q 042896 14 GHINPLLQFAKRLASKGVKATLATTHYT 41 (216)
Q Consensus 14 GH~~P~l~La~~La~~G~~Vt~it~~~~ 41 (216)
||+.|++.+. +|.+.||++.++.....
T Consensus 81 Ghlv~l~~l~-~lQ~~G~~~~~lIgD~h 107 (392)
T 1y42_X 81 GHLLPLMPLF-WMYLEGYKAFTLIGGST 107 (392)
T ss_dssp GGHHHHHHHH-HHHHHTCEEEEEECTTT
T ss_pred HHHHHHHHHH-HHHHcCCcEEEEEcCce
Confidence 9999877665 77888999988876543
No 139
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=24.15 E-value=54 Score=25.57 Aligned_cols=35 Identities=20% Similarity=0.130 Sum_probs=25.6
Q ss_pred ceEEEEcCCCccChH-HHHHHHHHHHhCCCeEEEEecc
Q 042896 3 RHVVLLPYPSQGHIN-PLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~-P~l~La~~La~~G~~Vt~it~~ 39 (216)
.+|+++.- .|+-- =-+-.||+|+++|++|+++...
T Consensus 86 ~~vlVlcG--~GNNGGDGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCG--PHVKGAQGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEEC--SSHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEEC--CCCCHHHHHHHHHHHHHCCCeEEEEEec
Confidence 37888774 44332 2478999999999999998654
No 140
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=23.74 E-value=1.5e+02 Score=19.02 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=21.0
Q ss_pred CceEEEeCCCCcc--HHHHHHHh-------CCCceeecccc
Q 042896 98 PVNCVVYDSFLPW--ALDVAKEY-------GLYGAAFFTNS 129 (216)
Q Consensus 98 ~~d~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~~ 129 (216)
++|+||.|..++- +.++.+++ ++|.+.+....
T Consensus 51 ~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (129)
T 3h1g_A 51 DTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEG 91 (129)
T ss_dssp TCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCC
Confidence 5899999998763 45555543 46766665443
No 141
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=23.65 E-value=93 Score=24.49 Aligned_cols=31 Identities=16% Similarity=0.219 Sum_probs=22.7
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEec
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATT 38 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~ 38 (216)
.+|.++-....| ..+|+.|+++||+|++...
T Consensus 6 ~kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~dr 36 (297)
T 4gbj_A 6 EKIAFLGLGNLG-----TPIAEILLEAGYELVVWNR 36 (297)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEC--
T ss_pred CcEEEEecHHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 467777665555 3589999999999998753
No 142
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=23.62 E-value=1.3e+02 Score=18.75 Aligned_cols=32 Identities=22% Similarity=0.260 Sum_probs=20.9
Q ss_pred CceEEEeCCCCcc--HHHHHHH----hCCCceeecccc
Q 042896 98 PVNCVVYDSFLPW--ALDVAKE----YGLYGAAFFTNS 129 (216)
Q Consensus 98 ~~d~vI~D~~~~~--~~~vA~~----lgiP~v~f~~~~ 129 (216)
++|+||.|..++. +.++.++ -++|.+++....
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 45 QPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred CCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 4799999987752 3444433 468877765544
No 143
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=23.34 E-value=1.4e+02 Score=19.99 Aligned_cols=42 Identities=10% Similarity=0.039 Sum_probs=24.6
Q ss_pred HHHHHHhhcCCCCceEEEeCCCCcc--HHHHHHH-------hCCCceeecccc
Q 042896 86 SELIKRYKNSSFPVNCVVYDSFLPW--ALDVAKE-------YGLYGAAFFTNS 129 (216)
Q Consensus 86 ~~~l~~~~~~~~~~d~vI~D~~~~~--~~~vA~~-------lgiP~v~f~~~~ 129 (216)
++.++.+.. .+||+||.|..++- +.++.++ -++|.+++....
T Consensus 41 ~~al~~l~~--~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 41 REAVRFLSL--TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHHHHHTT--CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 444444432 35899999987753 3444443 257777665433
No 144
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=23.27 E-value=1.1e+02 Score=22.78 Aligned_cols=37 Identities=14% Similarity=0.047 Sum_probs=26.3
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
+-|++++-. .|+..-+..+++.|+++|++|..+....
T Consensus 47 p~vv~~hG~-~~~~~~~~~~~~~l~~~g~~v~~~d~~G 83 (315)
T 4f0j_A 47 RTILLMHGK-NFCAGTWERTIDVLADAGYRVIAVDQVG 83 (315)
T ss_dssp CEEEEECCT-TCCGGGGHHHHHHHHHTTCEEEEECCTT
T ss_pred CeEEEEcCC-CCcchHHHHHHHHHHHCCCeEEEeecCC
Confidence 346666543 3555568899999999999987765543
No 145
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=23.24 E-value=79 Score=21.00 Aligned_cols=18 Identities=22% Similarity=0.311 Sum_probs=12.3
Q ss_pred HHHHHHHHhCCCeEEEEe
Q 042896 20 LQFAKRLASKGVKATLAT 37 (216)
Q Consensus 20 l~La~~La~~G~~Vt~it 37 (216)
.+.....++.|.+|.+++
T Consensus 69 ~~~i~~~~~~G~~V~~l~ 86 (117)
T 3hh1_A 69 VRQVIELLEEGSDVALVT 86 (117)
T ss_dssp HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHCCCeEEEEe
Confidence 334444456799999988
No 146
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=23.23 E-value=49 Score=24.22 Aligned_cols=20 Identities=10% Similarity=0.114 Sum_probs=17.2
Q ss_pred HHHHHHHHhCCCeEEEEecc
Q 042896 20 LQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 20 l~La~~La~~G~~Vt~it~~ 39 (216)
.+++++|+++|++|+.+.-.
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 14 KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp HHHHHHHTTSSCEEEEEESS
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 58899999999999988754
No 147
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=23.16 E-value=47 Score=26.39 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=24.4
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
+.+|+++-..+.| ..+|..|++.|++|+++....
T Consensus 2 ~mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh
Confidence 3567777554444 347889999999999987654
No 148
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=23.13 E-value=1.1e+02 Score=24.12 Aligned_cols=37 Identities=11% Similarity=0.201 Sum_probs=27.6
Q ss_pred CceEEEEcCCCccChHHH--HHHHHHHHhCC-CeEEEEecc
Q 042896 2 RRHVVLLPYPSQGHINPL--LQFAKRLASKG-VKATLATTH 39 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~--l~La~~La~~G-~~Vt~it~~ 39 (216)
+.+||++. -..+|-.+- -.|++.|.+.| ++|++....
T Consensus 4 ~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 4 PIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred ceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 56899994 233897554 57888888888 999998764
No 149
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=23.00 E-value=70 Score=24.14 Aligned_cols=36 Identities=28% Similarity=0.239 Sum_probs=22.2
Q ss_pred EEEEcCCCccCh--HHHHHHHHHHHhCCCeEEEEeccc
Q 042896 5 VVLLPYPSQGHI--NPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 5 v~~~p~p~~GH~--~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
+|++.-.+.||- .-+..+|+.|+++|+.|-.+....
T Consensus 58 ~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG 95 (259)
T 4ao6_A 58 LVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPG 95 (259)
T ss_dssp EEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC
T ss_pred EEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCC
Confidence 556655555663 347889999999999887765543
No 150
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=22.97 E-value=56 Score=23.02 Aligned_cols=22 Identities=27% Similarity=0.110 Sum_probs=18.7
Q ss_pred HHHHHHHHHhCCCeEEEEeccc
Q 042896 19 LLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 19 ~l~La~~La~~G~~Vt~it~~~ 40 (216)
=+++|..|+++|.+||++....
T Consensus 13 Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 13 GLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp HHHHHHHHHHTTCCEEEEECSC
T ss_pred HHHHHHHHHHCCCcEEEEeCCC
Confidence 4789999999999999997543
No 151
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=22.92 E-value=1.3e+02 Score=21.93 Aligned_cols=21 Identities=24% Similarity=0.409 Sum_probs=9.5
Q ss_pred hHHHHHHHHHHHhCCCeEEEE
Q 042896 16 INPLLQFAKRLASKGVKATLA 36 (216)
Q Consensus 16 ~~P~l~La~~La~~G~~Vt~i 36 (216)
-....++++.+.++|++|.++
T Consensus 121 ~~~~~~~a~~lk~~gi~v~~I 141 (192)
T 2x5n_A 121 EKNLIRLAKRMKKNNVAIDII 141 (192)
T ss_dssp HHHHHHHHHHHHHTTEEEEEE
T ss_pred chhHHHHHHHHHHCCCEEEEE
Confidence 333444444444444444443
No 152
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=22.82 E-value=1.1e+02 Score=23.81 Aligned_cols=31 Identities=13% Similarity=-0.066 Sum_probs=20.6
Q ss_pred CceEEEeCCCCc-c--H----HHHHHHhCCCceeeccc
Q 042896 98 PVNCVVYDSFLP-W--A----LDVAKEYGLYGAAFFTN 128 (216)
Q Consensus 98 ~~d~vI~D~~~~-~--~----~~vA~~lgiP~v~f~~~ 128 (216)
+||+||.|..++ - + ..+-+..++|.+.+...
T Consensus 205 ~~dlvl~D~~MPd~mdG~e~~~~ir~~~~~piI~lT~~ 242 (286)
T 3n0r_A 205 TPGLVLADIQLADGSSGIDAVKDILGRMDVPVIFITAF 242 (286)
T ss_dssp CCSEEEEESCCTTSCCTTTTTHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEcCCCCCCCCHHHHHHHHHhcCCCCEEEEeCC
Confidence 589999999887 2 2 23323338998776553
No 153
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=22.78 E-value=1.6e+02 Score=20.98 Aligned_cols=34 Identities=15% Similarity=0.082 Sum_probs=24.6
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 5 VVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 5 v~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
|++++ ...|.-.-+..+++.|+++|+.|..+...
T Consensus 31 vv~~h-G~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 31 IVIAQ-DIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp EEEEC-CTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred EEEEc-CCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 44444 44566678889999999999987766543
No 154
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=22.71 E-value=61 Score=24.09 Aligned_cols=20 Identities=15% Similarity=-0.007 Sum_probs=16.6
Q ss_pred HHHHHHHHHhCCCeEEEEec
Q 042896 19 LLQFAKRLASKGVKATLATT 38 (216)
Q Consensus 19 ~l~La~~La~~G~~Vt~it~ 38 (216)
=.+++++|+++|++|+++.-
T Consensus 14 G~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 14 GAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHhCCCEEEEEeC
Confidence 35789999999999998764
No 155
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=22.68 E-value=73 Score=23.57 Aligned_cols=37 Identities=14% Similarity=-0.023 Sum_probs=29.3
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 4 HVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 4 hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
+|++-.-+|.|=-.-...||..|+++|.+|-++-...
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4566555566777889999999999999999987654
No 156
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=22.64 E-value=62 Score=23.92 Aligned_cols=19 Identities=26% Similarity=0.284 Sum_probs=16.5
Q ss_pred HHHHHHHHhCCCeEEEEec
Q 042896 20 LQFAKRLASKGVKATLATT 38 (216)
Q Consensus 20 l~La~~La~~G~~Vt~it~ 38 (216)
.+++++|+++|++|+++..
T Consensus 19 ~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 19 EATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEEC
Confidence 6899999999999988764
No 157
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=22.60 E-value=1.5e+02 Score=18.78 Aligned_cols=21 Identities=24% Similarity=0.338 Sum_probs=15.1
Q ss_pred CceEEEeCCCCcc--HHHHHHHh
Q 042896 98 PVNCVVYDSFLPW--ALDVAKEY 118 (216)
Q Consensus 98 ~~d~vI~D~~~~~--~~~vA~~l 118 (216)
++|+||.|..++. +.++.+++
T Consensus 51 ~~dlvl~D~~l~~~~g~~~~~~l 73 (129)
T 1p6q_A 51 PHHLVISDFNMPKMDGLGLLQAV 73 (129)
T ss_dssp CCSEEEECSSSCSSCHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCHHHHHHHH
Confidence 5799999988753 45666654
No 158
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=22.54 E-value=1.7e+02 Score=19.14 Aligned_cols=41 Identities=10% Similarity=0.024 Sum_probs=22.8
Q ss_pred HHHHHHhhcCCCCceEEEeCCCCc---cHHHHHHH----hCCCceeecc
Q 042896 86 SELIKRYKNSSFPVNCVVYDSFLP---WALDVAKE----YGLYGAAFFT 127 (216)
Q Consensus 86 ~~~l~~~~~~~~~~d~vI~D~~~~---~~~~vA~~----lgiP~v~f~~ 127 (216)
++.++.+.+. .+||+||.|..++ -+.++.++ -++|.+++..
T Consensus 39 ~~a~~~l~~~-~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~ 86 (140)
T 3h5i_A 39 EAAVEKVSGG-WYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTA 86 (140)
T ss_dssp HHHHHHHHTT-CCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEES
T ss_pred HHHHHHHhcC-CCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEEC
Confidence 3444444322 3589999998764 23344433 3677666543
No 159
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=22.44 E-value=59 Score=27.36 Aligned_cols=26 Identities=23% Similarity=0.494 Sum_probs=20.9
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 14 GHINPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 14 GH~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
||+.|++.+ ++|.+.||++.++....
T Consensus 49 Gh~v~l~~~-~~lQ~~G~~~~~lIgd~ 74 (420)
T 1jil_A 49 GHLLPFLTL-RRFQEHGHRPIVLIGGG 74 (420)
T ss_dssp HHHHHHHHH-HHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHH-HHHHHCCCcEEEEEcCc
Confidence 999986665 58888999999887653
No 160
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=22.35 E-value=67 Score=25.47 Aligned_cols=31 Identities=19% Similarity=0.242 Sum_probs=22.6
Q ss_pred CceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 042896 2 RRHVVLLPYPSQGHINPLLQFAKRLASKGVKATLAT 37 (216)
Q Consensus 2 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it 37 (216)
+.+|.++-..+.| ..+|..|++.|++|+++.
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~ 49 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIA 49 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEE
Confidence 3567777555445 357899999999999993
No 161
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=22.30 E-value=1.8e+02 Score=19.30 Aligned_cols=32 Identities=22% Similarity=0.173 Sum_probs=20.8
Q ss_pred CceEEEeCCCCcc--HHHHHHHh-------CCCceeecccc
Q 042896 98 PVNCVVYDSFLPW--ALDVAKEY-------GLYGAAFFTNS 129 (216)
Q Consensus 98 ~~d~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~~ 129 (216)
++|+||.|..++- +.++.+++ ++|.+++....
T Consensus 61 ~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~ 101 (149)
T 1i3c_A 61 RPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSH 101 (149)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCC
Confidence 5899999998753 34444432 46777765543
No 162
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=22.10 E-value=1.4e+02 Score=19.17 Aligned_cols=30 Identities=13% Similarity=0.035 Sum_probs=23.3
Q ss_pred cChHHHHHHHHHHHhC-CC-eEEEEecccccc
Q 042896 14 GHINPLLQFAKRLASK-GV-KATLATTHYTAK 43 (216)
Q Consensus 14 GH~~P~l~La~~La~~-G~-~Vt~it~~~~~~ 43 (216)
......+.+|..+++. |+ +|+++-...-..
T Consensus 16 ~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~ 47 (117)
T 1jx7_A 16 ESLFNSLRLAIALREQESNLDLRLFLMSDAVT 47 (117)
T ss_dssp SHHHHHHHHHHHHHHHCTTCEEEEEECGGGGG
T ss_pred HHHHHHHHHHHHHHhcCCCccEEEEEEchHHH
Confidence 3456679999999998 99 999887765543
No 163
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=21.99 E-value=1.5e+02 Score=18.38 Aligned_cols=30 Identities=23% Similarity=0.181 Sum_probs=19.0
Q ss_pred CceEEEeCCCCcc--HHHHHHHh-----CCCceeecc
Q 042896 98 PVNCVVYDSFLPW--ALDVAKEY-----GLYGAAFFT 127 (216)
Q Consensus 98 ~~d~vI~D~~~~~--~~~vA~~l-----giP~v~f~~ 127 (216)
++|+||.|..++. +.++.+++ ++|.+.+..
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 81 (116)
T 3a10_A 45 NYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTA 81 (116)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEES
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEEC
Confidence 5799999987752 34444433 466666544
No 164
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=21.96 E-value=61 Score=25.95 Aligned_cols=35 Identities=23% Similarity=0.204 Sum_probs=25.7
Q ss_pred ceEEEEcCCCccChH-HHHHHHHHHHhCCCeEEEEecc
Q 042896 3 RHVVLLPYPSQGHIN-PLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~-P~l~La~~La~~G~~Vt~it~~ 39 (216)
.+|+++.-+ |+-- =-+-.||.|+.+|++|+++...
T Consensus 133 ~~vlVlcG~--GNNGGDGlv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGP--HVKGAQGISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECS--SHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECC--CCCHHHHHHHHHHHHHCCCcEEEEEec
Confidence 478888744 4331 2478999999999999998654
No 165
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=21.76 E-value=64 Score=24.12 Aligned_cols=20 Identities=0% Similarity=-0.122 Sum_probs=16.8
Q ss_pred HHHHHHHHHhCCCeEEEEec
Q 042896 19 LLQFAKRLASKGVKATLATT 38 (216)
Q Consensus 19 ~l~La~~La~~G~~Vt~it~ 38 (216)
=.+++++|+++|++|.++.-
T Consensus 20 G~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 20 GSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp HHHHHHHHHTTTCEEEEEES
T ss_pred HHHHHHHHHhCCCEEEEEeC
Confidence 36899999999999988754
No 166
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=21.72 E-value=1.7e+02 Score=20.59 Aligned_cols=24 Identities=17% Similarity=0.128 Sum_probs=18.2
Q ss_pred ChHHHHHHHHHHHhCCCeEEEEec
Q 042896 15 HINPLLQFAKRLASKGVKATLATT 38 (216)
Q Consensus 15 H~~P~l~La~~La~~G~~Vt~it~ 38 (216)
.-.-+..+++.|+++|+.|..+.-
T Consensus 54 ~~~~~~~~~~~l~~~g~~v~~~d~ 77 (220)
T 2fuk_A 54 HNKVVTMAARALRELGITVVRFNF 77 (220)
T ss_dssp TCHHHHHHHHHHHTTTCEEEEECC
T ss_pred cchHHHHHHHHHHHCCCeEEEEec
Confidence 334578899999999998776543
No 167
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=21.72 E-value=1.5e+02 Score=19.48 Aligned_cols=29 Identities=14% Similarity=0.212 Sum_probs=18.2
Q ss_pred CceEEEeCCCCcc--HHHHHHHh-----CCCceeec
Q 042896 98 PVNCVVYDSFLPW--ALDVAKEY-----GLYGAAFF 126 (216)
Q Consensus 98 ~~d~vI~D~~~~~--~~~vA~~l-----giP~v~f~ 126 (216)
++|+||.|..++. +.++.+++ ++|.+++.
T Consensus 49 ~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls 84 (141)
T 3cu5_A 49 PPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMS 84 (141)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEe
Confidence 5899999987753 44454443 45655543
No 168
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=21.70 E-value=50 Score=22.52 Aligned_cols=32 Identities=22% Similarity=0.247 Sum_probs=24.1
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEecccccccc
Q 042896 14 GHINPLLQFAKRLASKGVKATLATTHYTAKSI 45 (216)
Q Consensus 14 GH~~P~l~La~~La~~G~~Vt~it~~~~~~~~ 45 (216)
||++=+-.|-+.|.++|.+.-+++.+.|..-+
T Consensus 1 ~~m~Rl~~l~~~m~~~glDa~li~~~~ni~Yl 32 (140)
T 3i7m_A 1 GHMTKLEQIQQWTAQHHASMTYLSNPKTIEYL 32 (140)
T ss_dssp ---CHHHHHHHHHHHTTCSEEEECCHHHHHHH
T ss_pred CcchHHHHHHHHHHHcCCCEEEECCCCcceee
Confidence 78887777888999999999999988776544
No 169
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=21.65 E-value=1.2e+02 Score=24.05 Aligned_cols=32 Identities=28% Similarity=0.404 Sum_probs=23.9
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
.+|.++-....| ..+|+.|+++||+|++....
T Consensus 32 ~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 32 RKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp SEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 367777554444 56889999999999988654
No 170
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=21.64 E-value=1.3e+02 Score=18.84 Aligned_cols=32 Identities=19% Similarity=0.098 Sum_probs=20.4
Q ss_pred CceEEEeCCCCcc--HHHHHHHh-----CCCceeecccc
Q 042896 98 PVNCVVYDSFLPW--ALDVAKEY-----GLYGAAFFTNS 129 (216)
Q Consensus 98 ~~d~vI~D~~~~~--~~~vA~~l-----giP~v~f~~~~ 129 (216)
++|+||.|..++- +.++.+++ ++|.+.+....
T Consensus 47 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 47 KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 4799999998753 34444433 57766665443
No 171
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=21.38 E-value=68 Score=23.80 Aligned_cols=19 Identities=26% Similarity=0.261 Sum_probs=16.3
Q ss_pred HHHHHHHHhCCCeEEEEec
Q 042896 20 LQFAKRLASKGVKATLATT 38 (216)
Q Consensus 20 l~La~~La~~G~~Vt~it~ 38 (216)
.+++++|+++|++|.++.-
T Consensus 21 ~~~a~~l~~~G~~V~~~~r 39 (244)
T 1cyd_A 21 RDTVKALHASGAKVVAVTR 39 (244)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 5789999999999988754
No 172
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=21.34 E-value=82 Score=24.94 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=24.4
Q ss_pred ceEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 3 RHVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
.+|.++-....|. .+|+.|+++||+|++..-.
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr~ 35 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 3577776666663 5799999999999998643
No 173
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=21.24 E-value=59 Score=23.79 Aligned_cols=32 Identities=19% Similarity=0.415 Sum_probs=22.8
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 4 HVVLLPYPSQGHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 4 hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+|++.- +.|.+- .+|+++|+++|++|+.+.-.
T Consensus 6 ~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 6 KIVLIG--ASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp EEEEET--CCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred EEEEEc--CCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 555543 445443 57899999999999988754
No 174
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=21.18 E-value=67 Score=25.19 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=25.5
Q ss_pred ceEEEEcCCCccChH-HHHHHHHHHHhCCCeEEEEecc
Q 042896 3 RHVVLLPYPSQGHIN-PLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 3 ~hv~~~p~p~~GH~~-P~l~La~~La~~G~~Vt~it~~ 39 (216)
.+|+++.-+ |+-- =-+-.||.|+++|++|+++...
T Consensus 80 ~~VlVlcG~--GNNGGDGlv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGP--GNNGGDGLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECS--SHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECC--CCCHHHHHHHHHHHHHCCCcEEEEEeC
Confidence 478887744 3321 2478999999999999998653
No 175
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=21.10 E-value=69 Score=23.78 Aligned_cols=20 Identities=30% Similarity=0.313 Sum_probs=16.7
Q ss_pred HHHHHHHHHhCCCeEEEEec
Q 042896 19 LLQFAKRLASKGVKATLATT 38 (216)
Q Consensus 19 ~l~La~~La~~G~~Vt~it~ 38 (216)
=.+++++|+++|++|+++.-
T Consensus 20 G~~la~~l~~~G~~V~~~~r 39 (248)
T 2pnf_A 20 GRAIAEKLASAGSTVIITGT 39 (248)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 35789999999999988754
No 176
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=20.95 E-value=1.3e+02 Score=19.45 Aligned_cols=32 Identities=25% Similarity=0.195 Sum_probs=20.4
Q ss_pred CceEEEeCCCCcc--HHHHHHHh-----CCCceeecccc
Q 042896 98 PVNCVVYDSFLPW--ALDVAKEY-----GLYGAAFFTNS 129 (216)
Q Consensus 98 ~~d~vI~D~~~~~--~~~vA~~l-----giP~v~f~~~~ 129 (216)
++|+||.|..++- +.++.+++ ++|.+++....
T Consensus 49 ~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (133)
T 3b2n_A 49 NPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFK 87 (133)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCC
Confidence 4799999988753 44454443 47776665443
No 177
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=20.93 E-value=70 Score=23.93 Aligned_cols=20 Identities=20% Similarity=0.185 Sum_probs=16.9
Q ss_pred HHHHHHHHHhCCCeEEEEec
Q 042896 19 LLQFAKRLASKGVKATLATT 38 (216)
Q Consensus 19 ~l~La~~La~~G~~Vt~it~ 38 (216)
=.++|++|+++|++|.++.-
T Consensus 27 G~~~a~~l~~~G~~V~~~~r 46 (249)
T 3f9i_A 27 GSAIARLLHKLGSKVIISGS 46 (249)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEcC
Confidence 36899999999999988764
No 178
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=20.90 E-value=1.2e+02 Score=23.31 Aligned_cols=38 Identities=16% Similarity=0.246 Sum_probs=30.5
Q ss_pred ceEEEEcC--CCccChHHHHHHHHHHHhCCCeEEEEeccc
Q 042896 3 RHVVLLPY--PSQGHINPLLQFAKRLASKGVKATLATTHY 40 (216)
Q Consensus 3 ~hv~~~p~--p~~GH~~P~l~La~~La~~G~~Vt~it~~~ 40 (216)
.+++++.. ++.|=-.-...||..|+++|.+|.++-...
T Consensus 82 ~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 82 VQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp CCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 45666654 577888899999999999999999987653
No 179
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=20.73 E-value=71 Score=23.98 Aligned_cols=19 Identities=26% Similarity=0.380 Sum_probs=16.5
Q ss_pred HHHHHHHHhCCCeEEEEec
Q 042896 20 LQFAKRLASKGVKATLATT 38 (216)
Q Consensus 20 l~La~~La~~G~~Vt~it~ 38 (216)
.+++++|+++|++|.++.-
T Consensus 27 ~~la~~l~~~G~~V~~~~r 45 (260)
T 3awd_A 27 LACVTALAEAGARVIIADL 45 (260)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 6799999999999988764
No 180
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=20.63 E-value=1.5e+02 Score=20.52 Aligned_cols=37 Identities=19% Similarity=0.220 Sum_probs=22.2
Q ss_pred ceEEEEcCCCccCh-HHHHHHHHHHHhCCCeEEEEecc
Q 042896 3 RHVVLLPYPSQGHI-NPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 3 ~hv~~~p~p~~GH~-~P~l~La~~La~~G~~Vt~it~~ 39 (216)
+.|++++-.+.+.- .-.-.+++.|+++|++|..+.-+
T Consensus 5 p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 42 (192)
T 1uxo_A 5 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP 42 (192)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS
T ss_pred CEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC
Confidence 45777775544322 12223456788999988766544
No 181
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima}
Probab=20.57 E-value=50 Score=26.91 Aligned_cols=26 Identities=19% Similarity=0.235 Sum_probs=22.7
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEecc
Q 042896 14 GHINPLLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 14 GH~~P~l~La~~La~~G~~Vt~it~~ 39 (216)
||+.|.+.-.+.|.+.||++.++...
T Consensus 28 Gn~~g~l~~~~~lQ~~G~~~~~~IaD 53 (340)
T 2g36_A 28 GHLVGALENWVKLQEEGNECFYFVAD 53 (340)
T ss_dssp HHHHTHHHHHHHHHHTTCEEEEEECH
T ss_pred HhHHHHHHHHHHHHHCCCCEEEEEec
Confidence 88898888888899999999998765
No 182
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=20.50 E-value=1.5e+02 Score=19.28 Aligned_cols=41 Identities=12% Similarity=0.087 Sum_probs=23.5
Q ss_pred HHHHHHhhcCCCCceEEEeCCCCcc--HHHHHHHh-----CCCceeecccc
Q 042896 86 SELIKRYKNSSFPVNCVVYDSFLPW--ALDVAKEY-----GLYGAAFFTNS 129 (216)
Q Consensus 86 ~~~l~~~~~~~~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~f~~~~ 129 (216)
.+.++.+.. .++|+||.|. ++- +.++.+++ ++|.+++....
T Consensus 38 ~~a~~~l~~--~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 38 QEAFTFLRR--EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp HHHHHHHTT--SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred HHHHHHHhc--cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 344444432 3589999999 653 23444332 57877765543
No 183
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=20.44 E-value=1.7e+02 Score=18.85 Aligned_cols=32 Identities=13% Similarity=0.120 Sum_probs=19.9
Q ss_pred CceEEEeCCCCcc--HHHHHHHh-----CCCceeecccc
Q 042896 98 PVNCVVYDSFLPW--ALDVAKEY-----GLYGAAFFTNS 129 (216)
Q Consensus 98 ~~d~vI~D~~~~~--~~~vA~~l-----giP~v~f~~~~ 129 (216)
++|+||.|..++. +.++.+++ ++|.+++....
T Consensus 47 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (132)
T 3crn_A 47 FFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYA 85 (132)
T ss_dssp CCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCC
T ss_pred CCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccc
Confidence 5799999987752 34444332 56776665443
No 184
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=20.43 E-value=1.3e+02 Score=19.70 Aligned_cols=32 Identities=6% Similarity=-0.076 Sum_probs=21.0
Q ss_pred CceEEEeCCCCc--cHHHHHHHh----CCCceeecccc
Q 042896 98 PVNCVVYDSFLP--WALDVAKEY----GLYGAAFFTNS 129 (216)
Q Consensus 98 ~~d~vI~D~~~~--~~~~vA~~l----giP~v~f~~~~ 129 (216)
++|+||.|..++ .+.++.+++ .+|.+++....
T Consensus 48 ~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 48 KYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp CCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 579999998775 344555543 57777665443
No 185
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=20.39 E-value=1.3e+02 Score=21.48 Aligned_cols=33 Identities=27% Similarity=0.284 Sum_probs=23.4
Q ss_pred eEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 042896 4 HVVLLPYPSQGHINPLLQFAKRLASKGVKATLAT 37 (216)
Q Consensus 4 hv~~~p~p~~GH~~P~l~La~~La~~G~~Vt~it 37 (216)
-|+++. ...|+-.-+..+++.|+++|+.|..+.
T Consensus 24 ~vv~~H-G~~~~~~~~~~~~~~l~~~G~~v~~~d 56 (251)
T 3dkr_A 24 GVVLLH-AYTGSPNDMNFMARALQRSGYGVYVPL 56 (251)
T ss_dssp EEEEEC-CTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred eEEEeC-CCCCCHHHHHHHHHHHHHCCCEEEecC
Confidence 344444 444666678899999999999876553
No 186
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=20.35 E-value=74 Score=23.54 Aligned_cols=20 Identities=25% Similarity=0.238 Sum_probs=16.6
Q ss_pred HHHHHHHHHhCCCeEEEEec
Q 042896 19 LLQFAKRLASKGVKATLATT 38 (216)
Q Consensus 19 ~l~La~~La~~G~~Vt~it~ 38 (216)
=.++|++|+++|++|.++.-
T Consensus 15 G~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 15 GEAIARALARDGYALALGAR 34 (235)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 36899999999999887654
No 187
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=20.18 E-value=74 Score=23.75 Aligned_cols=21 Identities=29% Similarity=0.245 Sum_probs=17.1
Q ss_pred HHHHHHHHHhCCCeEEEEecc
Q 042896 19 LLQFAKRLASKGVKATLATTH 39 (216)
Q Consensus 19 ~l~La~~La~~G~~Vt~it~~ 39 (216)
=.+++++|+++|++|.++.-.
T Consensus 20 G~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 20 GLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEECCC
Confidence 357899999999999887643
No 188
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=20.11 E-value=74 Score=24.19 Aligned_cols=19 Identities=11% Similarity=0.321 Sum_probs=16.2
Q ss_pred HHHHHHHHhCCCeEEEEec
Q 042896 20 LQFAKRLASKGVKATLATT 38 (216)
Q Consensus 20 l~La~~La~~G~~Vt~it~ 38 (216)
.+++++|+++|++|.++.-
T Consensus 21 ~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 21 ASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 5789999999999988654
No 189
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=20.11 E-value=68 Score=23.76 Aligned_cols=18 Identities=28% Similarity=0.261 Sum_probs=15.8
Q ss_pred HHHHHHHHHhCCCeEEEE
Q 042896 19 LLQFAKRLASKGVKATLA 36 (216)
Q Consensus 19 ~l~La~~La~~G~~Vt~i 36 (216)
=.+++++|+++|++|+++
T Consensus 14 G~~~a~~l~~~G~~v~~~ 31 (245)
T 2ph3_A 14 GRAIALRLAEDGFALAIH 31 (245)
T ss_dssp HHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEE
Confidence 357899999999999987
Done!