BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 042898
         (135 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q00451|PRF1_SOLLC 36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1
           PE=2 SV=1
          Length = 346

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/73 (71%), Positives = 61/73 (83%), Gaps = 1/73 (1%)

Query: 45  TGPIDALKLGACVDVPGGLIHIGLGHNAKEKCCPLLQGLADLDAAICLCTAIRVNALKLI 104
           T PIDALKLGACVDV GGLIHIG+G +AK+ CCPLL GL DLDAAICLCT IR+  L  I
Sbjct: 260 TCPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLN-I 318

Query: 105 NLLVPISLQVLVS 117
           N+++PI+LQVL+ 
Sbjct: 319 NIILPIALQVLID 331


>sp|Q01595|CCDP_MAIZE Cortical cell-delineating protein OS=Zea mays PE=2 SV=1
          Length = 129

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 4/72 (5%)

Query: 47  PIDALKLGACVDVPGGLIHIGLGHNAKEKCCPLLQGLADLDAAICLCTAIRVNALKLINL 106
           PIDALKL  C  V G L+ +GL     E+CCPLL+GL DLDAA+CLCTAI+ N L  I+L
Sbjct: 49  PIDALKLKVCAKVLG-LVKVGLPQ--YEQCCPLLEGLVDLDAALCLCTAIKANVLG-IHL 104

Query: 107 LVPISLQVLVST 118
            VP+SL  +++ 
Sbjct: 105 NVPLSLNFILNN 116


>sp|Q8RW93|LBP65_ARATH Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana
           GN=At4g00165 PE=2 SV=1
          Length = 128

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 1/95 (1%)

Query: 31  VKPPPPPAPPTELQTGPIDALKLGACVDVPGGLIHIGLGHNAKEKCCPLLQGLADLDAAI 90
           VKP PPP         P D LK G C    G L+   +G    ++CC L++GLAD +AA+
Sbjct: 31  VKPCPPPPAKQATTKCPRDTLKFGVCGSWLG-LVSEVIGTPPSQECCSLIKGLADFEAAV 89

Query: 91  CLCTAIRVNALKLINLLVPISLQVLVSTTVANIRQ 125
           CLCTA++ + L +  + +P++L +L+++   N+ Q
Sbjct: 90  CLCTALKTSILGVAPVKIPVALTLLLNSCGKNVPQ 124


>sp|P14009|14KD_DAUCA 14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1
          Length = 137

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 1/72 (1%)

Query: 47  PIDALKLGACVDVPGGLIHIGLGHNAKEKCCPLLQGLADLDAAICLCTAIRVNALKLINL 106
           P DALKLG C DV   + ++ +G      CC LL+GL +L+AA+CLCTAI+ N L   NL
Sbjct: 55  PRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILG-KNL 113

Query: 107 LVPISLQVLVST 118
            +PI+L ++++ 
Sbjct: 114 NLPIALSLVLNN 125


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.139    0.453 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,886,593
Number of Sequences: 539616
Number of extensions: 3079290
Number of successful extensions: 112584
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2116
Number of HSP's successfully gapped in prelim test: 1233
Number of HSP's that attempted gapping in prelim test: 37941
Number of HSP's gapped (non-prelim): 38337
length of query: 135
length of database: 191,569,459
effective HSP length: 100
effective length of query: 35
effective length of database: 137,607,859
effective search space: 4816275065
effective search space used: 4816275065
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)