BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042902
(599 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 102/192 (53%), Gaps = 5/192 (2%)
Query: 412 VANLRRFTHLELFQATNGFSENNLIGRGGVASVYKARIQDGIEVAVKVF-DLQYEGAFKS 470
+ L+RF+ EL A++ FS N++GRGG VYK R+ DG VAVK + + +G
Sbjct: 22 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ 81
Query: 471 FDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLY---SSNYILDIFQR 527
F E +M+ HRNL+++ C + LV YM +GS+ CL S LD +R
Sbjct: 82 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 141
Query: 528 LNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ 587
I + A L YLH IIH D+K N+LLD+ A + DFG+AK + +D +
Sbjct: 142 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 201
Query: 588 TQTLATIGYMAP 599
TIG++AP
Sbjct: 202 A-VRGTIGHIAP 212
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 100/192 (52%), Gaps = 5/192 (2%)
Query: 412 VANLRRFTHLELFQATNGFSENNLIGRGGVASVYKARIQDGIEVAVKVF-DLQYEGAFKS 470
+ L+RF+ EL A++ F N++GRGG VYK R+ DG VAVK + + +G
Sbjct: 14 LGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ 73
Query: 471 FDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLY---SSNYILDIFQR 527
F E +M+ HRNL+++ C + LV YM +GS+ CL S LD +R
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 133
Query: 528 LNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ 587
I + A L YLH IIH D+K N+LLD+ A + DFG+AK + +D +
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 193
Query: 588 TQTLATIGYMAP 599
IG++AP
Sbjct: 194 A-VRGXIGHIAP 204
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 167/413 (40%), Gaps = 58/413 (14%)
Query: 6 NNFSGTIPSFIFN-ASKLSRLELEMNSFYG-FIPNTFGNLRN-LKRLSLNYNYLTSSTPK 62
N FSG +P + N ++ L L+L N+F G +PN N +N L+ L L N T P
Sbjct: 350 NEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPP 409
Query: 63 LNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLT 122
+LSNC L L S N L G +P ++G+LS+ ++ N + G IP+E+ +
Sbjct: 410 -----TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM-LEGEIPQELMYVK 463
Query: 123 NLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKL 182
L T+ L N L G IP +N+L G IP N
Sbjct: 464 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 523
Query: 183 SGFVPACFGNLTSLRNLYLGSNQLT-SIPSTLWNLKYILYLNLSSN-------------- 227
SG +PA G+ SL L L +N +IP+ ++ + N +
Sbjct: 524 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKE 583
Query: 228 --------SFTGPLPLEIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQG 279
F G ++ L +++ + G T + + +L + YN L G
Sbjct: 584 CHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSG 643
Query: 280 SIPDSIGGLIDLKSLDLSNNNISGAIPISLEKLLDLKYINVSFNKLEGEIPRE------- 332
IP IG + L L+L +N+ISG+IP + L L +++S NKL+G IP+
Sbjct: 644 YIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTML 703
Query: 333 -----------------GPFRNFSAESFKGNELLCGTPNLQVPPCRTR--IHH 366
G F F F N LCG P + P HH
Sbjct: 704 TEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNADGYAHH 756
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 165/358 (46%), Gaps = 23/358 (6%)
Query: 1 LLLWGNNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSST 60
L + GN SG + + L L++ N+F IP G+ L+ L ++ N L+
Sbjct: 180 LAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSG-- 234
Query: 61 PKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISN 120
+F ++S C LK L+ S+N G +P +S++ + +G IP+ +S
Sbjct: 235 ---DFSRAISTCTELKLLNISSNQFVGPIPPLP---LKSLQYLSLAENKFTGEIPDFLSG 288
Query: 121 LTN-LTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXX-G 178
+ LT + L GN G++P N G +P
Sbjct: 289 ACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLS 348
Query: 179 GNKLSGFVPACFGNLT-SLRNLYLGSNQLTS--IPSTLWNLKYILY-LNLSSNSFTGPLP 234
N+ SG +P NL+ SL L L SN + +P+ N K L L L +N FTG +P
Sbjct: 349 FNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIP 408
Query: 235 LEIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSL 294
+ N LV + LS N SG IP+++G L L+ L L N L+G IP + + L++L
Sbjct: 409 PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETL 468
Query: 295 DLSNNNISGAIPISLEKLLDLKYINVSFNKLEGEIPRE-GPFRN-----FSAESFKGN 346
L N+++G IP L +L +I++S N+L GEIP+ G N S SF GN
Sbjct: 469 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 526
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 142/315 (45%), Gaps = 32/315 (10%)
Query: 1 LLLWGNNFSGTIPSFIFNA-SKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSS 59
L L N F+G IP F+ A L+ L+L N FYG +P FG+ L+ L+L+ N +
Sbjct: 271 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 330
Query: 60 TPKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSI-PEEI 118
P + +L + LK L S N G LP ++ NLS S+ + + N SG I P
Sbjct: 331 LP----MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 386
Query: 119 SNLTN-LTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXX 177
N N L +YL ++N G IP
Sbjct: 387 QNPKNTLQELYL------------------------QNNGFTGKIPPTLSNCSELVSLHL 422
Query: 178 GGNKLSGFVPACFGNLTSLRNLYLGSNQLT-SIPSTLWNLKYILYLNLSSNSFTGPLPLE 236
N LSG +P+ G+L+ LR+L L N L IP L +K + L L N TG +P
Sbjct: 423 SFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG 482
Query: 237 IGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDL 296
+ N L I LS N +G IP IG L++L L L N G+IP +G L LDL
Sbjct: 483 LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 542
Query: 297 SNNNISGAIPISLEK 311
+ N +G IP ++ K
Sbjct: 543 NTNLFNGTIPAAMFK 557
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 145/332 (43%), Gaps = 13/332 (3%)
Query: 6 NNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSSTPKLNF 65
NNFS IP F+ + S L L++ N G LK L+++ N P L
Sbjct: 207 NNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPL 265
Query: 66 LSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLTNLT 125
K L+YLS + N G +P + ++ + + G++P + + L
Sbjct: 266 -------KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLE 318
Query: 126 TIYLGGNKLNGSIPI-AXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXX-GGNKLS 183
++ L N +G +P+ N+ G +P N S
Sbjct: 319 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFS 378
Query: 184 G-FVPA-CFGNLTSLRNLYLGSNQLTS-IPSTLWNLKYILYLNLSSNSFTGPLPLEIGNL 240
G +P C +L+ LYL +N T IP TL N ++ L+LS N +G +P +G+L
Sbjct: 379 GPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 438
Query: 241 RVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLSNNN 300
L + L +N G IP + +K L+ L L++N L G IP + +L + LSNN
Sbjct: 439 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 498
Query: 301 ISGAIPISLEKLLDLKYINVSFNKLEGEIPRE 332
++G IP + +L +L + +S N G IP E
Sbjct: 499 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 530
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 13/261 (4%)
Query: 1 LLLWGNNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSST 60
L+L N+ +G IPS + N + L+ + L N G IP G L NL L L+ N + +
Sbjct: 468 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 527
Query: 61 PKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISN 120
P + L +C+ L +L + N +G +P A+ QS ++ F I+G I N
Sbjct: 528 P-----AELGDCRSLIWLDLNTNLFNGTIPAAM--FKQSGKIAANF---IAGKRYVYIKN 577
Query: 121 LTNLTTIYLGGN--KLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXG 178
+ GN + G G
Sbjct: 578 DGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMS 637
Query: 179 GNKLSGFVPACFGNLTSLRNLYLGSNQLT-SIPSTLWNLKYILYLNLSSNSFTGPLPLEI 237
N LSG++P G++ L L LG N ++ SIP + +L+ + L+LSSN G +P +
Sbjct: 638 YNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAM 697
Query: 238 GNLRVLVQIDLSMNNFSGFIP 258
L +L +IDLS NN SG IP
Sbjct: 698 SALTMLTEIDLSNNNLSGPIP 718
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 132/290 (45%), Gaps = 13/290 (4%)
Query: 46 LKRLSLNYNYLTSSTPKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFM 105
L L L+ N L+ + L+SL +C LK+L+ S+N+LD + G S+EV +
Sbjct: 99 LTSLDLSRNSLSG---PVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDL 155
Query: 106 FNCNISGS--IPEEISN-LTNLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSI 162
+ISG+ + +S+ L + + GNK++G + ++ N I
Sbjct: 156 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVS--RCVNLEFLDVSSNNFSTGI 213
Query: 163 PXXXXXXXXXXXXXXGGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYL 222
P GNKLSG T L+ L + SNQ P LK + YL
Sbjct: 214 PFLGDCSALQHLDIS-GNKLSGDFSRAISTCTELKLLNISSNQFVG-PIPPLPLKSLQYL 271
Query: 223 NLSSNSFTGPLP-LEIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSI 281
+L+ N FTG +P G L +DLS N+F G +P G L+ L L N G +
Sbjct: 272 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 331
Query: 282 P-DSIGGLIDLKSLDLSNNNISGAIPISLEKL-LDLKYINVSFNKLEGEI 329
P D++ + LK LDLS N SG +P SL L L +++S N G I
Sbjct: 332 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 381
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 166/405 (40%), Gaps = 59/405 (14%)
Query: 6 NNFSGTIPSFIFN-ASKLSRLELEMNSFYG-FIPNTFGNLRN-LKRLSLNYNYLTSSTPK 62
N FSG +P + N ++ L L+L N+F G +PN N +N L+ L L N T P
Sbjct: 353 NEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPP 412
Query: 63 LNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLT 122
+LSNC L L S N L G +P ++G+LS+ ++ N + G IP+E+ +
Sbjct: 413 -----TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM-LEGEIPQELMYVK 466
Query: 123 NLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKL 182
L T+ L N L G IP +N+L G IP N
Sbjct: 467 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 526
Query: 183 SGFVPACFGNLTSLRNLYLGSNQLT-SIPSTLWNLKYILYLNLSSN-------------- 227
SG +PA G+ SL L L +N +IP+ ++ + N +
Sbjct: 527 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKE 586
Query: 228 --------SFTGPLPLEIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQG 279
F G ++ L +++ + G T + + +L + YN L G
Sbjct: 587 CHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSG 646
Query: 280 SIPDSIGGLIDLKSLDLSNNNISGAIPISLEKLLDLKYINVSFNKLEGEIPRE------- 332
IP IG + L L+L +N+ISG+IP + L L +++S NKL+G IP+
Sbjct: 647 YIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTML 706
Query: 333 -----------------GPFRNFSAESFKGNELLCGTPNLQVPPC 360
G F F F N LCG P +P C
Sbjct: 707 TEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP---LPRC 748
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 165/358 (46%), Gaps = 23/358 (6%)
Query: 1 LLLWGNNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSST 60
L + GN SG + + L L++ N+F IP G+ L+ L ++ N L+
Sbjct: 183 LAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSG-- 237
Query: 61 PKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISN 120
+F ++S C LK L+ S+N G +P +S++ + +G IP+ +S
Sbjct: 238 ---DFSRAISTCTELKLLNISSNQFVGPIPPLP---LKSLQYLSLAENKFTGEIPDFLSG 291
Query: 121 LTN-LTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXX-G 178
+ LT + L GN G++P N G +P
Sbjct: 292 ACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLS 351
Query: 179 GNKLSGFVPACFGNLT-SLRNLYLGSNQLTS--IPSTLWNLKYILY-LNLSSNSFTGPLP 234
N+ SG +P NL+ SL L L SN + +P+ N K L L L +N FTG +P
Sbjct: 352 FNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIP 411
Query: 235 LEIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSL 294
+ N LV + LS N SG IP+++G L L+ L L N L+G IP + + L++L
Sbjct: 412 PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETL 471
Query: 295 DLSNNNISGAIPISLEKLLDLKYINVSFNKLEGEIPRE-GPFRN-----FSAESFKGN 346
L N+++G IP L +L +I++S N+L GEIP+ G N S SF GN
Sbjct: 472 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 142/315 (45%), Gaps = 32/315 (10%)
Query: 1 LLLWGNNFSGTIPSFIFNA-SKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSS 59
L L N F+G IP F+ A L+ L+L N FYG +P FG+ L+ L+L+ N +
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 60 TPKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSI-PEEI 118
P + +L + LK L S N G LP ++ NLS S+ + + N SG I P
Sbjct: 334 LP----MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 389
Query: 119 SNLTN-LTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXX 177
N N L +YL ++N G IP
Sbjct: 390 QNPKNTLQELYL------------------------QNNGFTGKIPPTLSNCSELVSLHL 425
Query: 178 GGNKLSGFVPACFGNLTSLRNLYLGSNQLT-SIPSTLWNLKYILYLNLSSNSFTGPLPLE 236
N LSG +P+ G+L+ LR+L L N L IP L +K + L L N TG +P
Sbjct: 426 SFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG 485
Query: 237 IGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDL 296
+ N L I LS N +G IP IG L++L L L N G+IP +G L LDL
Sbjct: 486 LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 545
Query: 297 SNNNISGAIPISLEK 311
+ N +G IP ++ K
Sbjct: 546 NTNLFNGTIPAAMFK 560
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 145/332 (43%), Gaps = 13/332 (3%)
Query: 6 NNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSSTPKLNF 65
NNFS IP F+ + S L L++ N G LK L+++ N P L
Sbjct: 210 NNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPL 268
Query: 66 LSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLTNLT 125
K L+YLS + N G +P + ++ + + G++P + + L
Sbjct: 269 -------KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLE 321
Query: 126 TIYLGGNKLNGSIPI-AXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXX-GGNKLS 183
++ L N +G +P+ N+ G +P N S
Sbjct: 322 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFS 381
Query: 184 G-FVPA-CFGNLTSLRNLYLGSNQLTS-IPSTLWNLKYILYLNLSSNSFTGPLPLEIGNL 240
G +P C +L+ LYL +N T IP TL N ++ L+LS N +G +P +G+L
Sbjct: 382 GPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 441
Query: 241 RVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLSNNN 300
L + L +N G IP + +K L+ L L++N L G IP + +L + LSNN
Sbjct: 442 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 501
Query: 301 ISGAIPISLEKLLDLKYINVSFNKLEGEIPRE 332
++G IP + +L +L + +S N G IP E
Sbjct: 502 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 533
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 132/290 (45%), Gaps = 13/290 (4%)
Query: 46 LKRLSLNYNYLTSSTPKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFM 105
L L L+ N L+ + L+SL +C LK+L+ S+N+LD + G S+EV +
Sbjct: 102 LTSLDLSRNSLSG---PVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDL 158
Query: 106 FNCNISGS--IPEEISN-LTNLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSI 162
+ISG+ + +S+ L + + GNK++G + ++ N I
Sbjct: 159 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVS--RCVNLEFLDVSSNNFSTGI 216
Query: 163 PXXXXXXXXXXXXXXGGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYL 222
P GNKLSG T L+ L + SNQ P LK + YL
Sbjct: 217 PFLGDCSALQHLDIS-GNKLSGDFSRAISTCTELKLLNISSNQFVG-PIPPLPLKSLQYL 274
Query: 223 NLSSNSFTGPLP-LEIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSI 281
+L+ N FTG +P G L +DLS N+F G +P G L+ L L N G +
Sbjct: 275 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 334
Query: 282 P-DSIGGLIDLKSLDLSNNNISGAIPISLEKL-LDLKYINVSFNKLEGEI 329
P D++ + LK LDLS N SG +P SL L L +++S N G I
Sbjct: 335 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 384
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 113/275 (41%), Gaps = 48/275 (17%)
Query: 1 LLLWGNNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSST 60
L+L N+ +G IPS + N + L+ + L N G IP G L NL L L+ N + +
Sbjct: 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 530
Query: 61 PKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMF-------------- 106
P + L +C+ L +L + N +G +P A+ S + F+
Sbjct: 531 P-----AELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKK 585
Query: 107 NCNISGSIPE------------EISNLTNLTTIYLGGNKL-----NGSIPIAXXXXXXXX 149
C+ +G++ E N N+T+ GG+ NGS+
Sbjct: 586 ECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSY---- 641
Query: 150 XXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKLSGFVPACFGNLTSLRNLYLGSNQLTS- 208
N L G IP G N +SG +P G+L L L L SN+L
Sbjct: 642 ------NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR 695
Query: 209 IPSTLWNLKYILYLNLSSNSFTGPLPLEIGNLRVL 243
IP + L + ++LS+N+ +GP+P E+G
Sbjct: 696 IPQAMSALTMLTEIDLSNNNLSGPIP-EMGQFETF 729
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 127/295 (43%), Gaps = 53/295 (17%)
Query: 67 SSLSNCKYLKYLSFSN-NSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLTNLT 125
SSL+N YL +L N+L G +P AI L+Q + ++ + N+SG+IP+ +S + L
Sbjct: 70 SSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQ-LHYLYITHTNVSGAIPDFLSQIKTLV 128
Query: 126 TIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKLSGF 185
T+ N L G++P GN++SG
Sbjct: 129 TLDF------------------------SYNALSGTLPPSISSLPNLVGITFDGNRISGA 164
Query: 186 VPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPLEIGNLRVLVQ 245
+P +G+ + K + +S N TG +P NL L
Sbjct: 165 IPDSYGSFS----------------------KLFTSMTISRNRLTGKIPPTFANLN-LAF 201
Query: 246 IDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLSNNNISGAI 305
+DLS N G G K+ Q + L N L + +G +L LDL NN I G +
Sbjct: 202 VDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTL 260
Query: 306 PISLEKLLDLKYINVSFNKLEGEIPREGPFRNFSAESFKGNELLCGTPNLQVPPC 360
P L +L L +NVSFN L GEIP+ G + F ++ N+ LCG+P +P C
Sbjct: 261 PQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP---LPAC 312
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 6 NNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSSTPKLNF 65
NN G IP I ++L L + + G IP+ ++ L L +YN L+ + P
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPP--- 143
Query: 66 LSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLTNLT 125
S+S+ L ++F N + G +P + G+ S+ + ++G IP +NL NL
Sbjct: 144 --SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLA 200
Query: 126 TIYLGGNKLNG 136
+ L N L G
Sbjct: 201 FVDLSRNMLEG 211
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 100/186 (53%), Gaps = 6/186 (3%)
Query: 417 RFTHLELFQATNGFSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECD 476
R ++L +ATN F LIG G VYK ++DG +VA+K + + F+ E +
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 477 MMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN---YILDIFQRLNIMID 533
+ RH +L+ +I C + L+ +YM +G+L++ LY S+ + QRL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
A L YLH + IIH D+K N+LLD+N V ++DFG++K + DQ+ T
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 594 IGYMAP 599
+GY+ P
Sbjct: 205 LGYIDP 210
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 99/186 (53%), Gaps = 6/186 (3%)
Query: 417 RFTHLELFQATNGFSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECD 476
R ++L +ATN F LIG G VYK ++DG +VA+K + + F+ E +
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 477 MMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN---YILDIFQRLNIMID 533
+ RH +L+ +I C + L+ +YM +G+L++ LY S+ + QRL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
A L YLH + IIH D+K N+LLD+N V ++DFG++K + Q+ T
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 594 IGYMAP 599
+GY+ P
Sbjct: 205 LGYIDP 210
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 97/195 (49%), Gaps = 18/195 (9%)
Query: 418 FTHLELFQATNGFSEN------NLIGRGGVASVYKARIQDGIEVAVK----VFDLQYEGA 467
F+ EL TN F E N +G GG VYK + + VAVK + D+ E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 468 FKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEK---CLYSSNYILDI 524
+ FD E +M + +H NL++++ S+ D LV YMP+GSL CL L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSW 132
Query: 525 FQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQS 584
R I A+ + +LH + IH D+K N+LLD+ A +SDFG+A+ K Q+
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 585 LTQTQTLATIGYMAP 599
+ ++ + T YMAP
Sbjct: 190 VMXSRIVGTTAYMAP 204
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 96/195 (49%), Gaps = 18/195 (9%)
Query: 418 FTHLELFQATNGFSEN------NLIGRGGVASVYKARIQDGIEVAVK----VFDLQYEGA 467
F+ EL TN F E N +G GG VYK + + VAVK + D+ E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 468 FKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEK---CLYSSNYILDI 524
+ FD E +M + +H NL++++ S+ D LV YMP+GSL CL L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSW 132
Query: 525 FQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQS 584
R I A+ + +LH + IH D+K N+LLD+ A +SDFG+A+ K Q+
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 585 LTQTQTLATIGYMAP 599
+ + + T YMAP
Sbjct: 190 VMXXRIVGTTAYMAP 204
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 95/195 (48%), Gaps = 18/195 (9%)
Query: 418 FTHLELFQATNGFSEN------NLIGRGGVASVYKARIQDGIEVAVK----VFDLQYEGA 467
F+ EL TN F E N +G GG VYK + + VAVK + D+ E
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 468 FKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEK---CLYSSNYILDI 524
+ FD E +M + +H NL++++ S+ D LV YMP+GSL CL L
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSW 126
Query: 525 FQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQS 584
R I A+ + +LH + IH D+K N+LLD+ A +SDFG+A+ K Q
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 585 LTQTQTLATIGYMAP 599
+ + + T YMAP
Sbjct: 184 VMXXRIVGTTAYMAP 198
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 8/168 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQ--YEGAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G +V++A G +VAVK+ Q + F E +MKR+RH N++ + +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSS--NYILDIFQRLNIMIDVASALEYLHFGYSVPIIH 551
+ ++V EY+ GSL + L+ S LD +RL++ DVA + YLH + PI+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 552 CDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
DLK N+L+D + DFG+++ LK L T +MAP
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSR--LKASXFLXSKXAAGTPEWMAP 208
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 418 FTHLELFQATNGFSEN------NLIGRGGVASVYKARIQDGIEVAVK----VFDLQYEGA 467
F+ EL TN F E N G GG VYK + + VAVK + D+ E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 468 FKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEK---CLYSSNYILDI 524
+ FD E + + +H NL++++ S+ D LV Y P+GSL CL L
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCL-DGTPPLSW 123
Query: 525 FQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQS 584
R I A+ + +LH + IH D+K N+LLD+ A +SDFG+A+ K Q
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 585 LTQTQTLATIGYMAP 599
+ ++ + T Y AP
Sbjct: 181 VXXSRIVGTTAYXAP 195
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQ--YEGAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G +V++A G +VAVK+ Q + F E +MKR+RH N++ + +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSS--NYILDIFQRLNIMIDVASALEYLHFGYSVPIIH 551
+ ++V EY+ GSL + L+ S LD +RL++ DVA + YLH + PI+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 552 CDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+LK N+L+D + DFG+++ LK L+ T +MAP
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSR--LKASTFLSSKSAAGTPEWMAP 208
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Query: 436 IGRGGVASVYKARIQDGIEVAV-KVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
IG G +VYK + + V + KV D E F++F E ++++ RH N++ + +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPE-QFQAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
D+ A+V ++ SL K L+ +FQ ++I A ++YLH + IIH D+
Sbjct: 103 KDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDM 158
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K NN+ L + + + DFG+A + S Q ++ +MAP
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARI----QDGIEVAVKVFDLQY-EGAFKSFDIECDMMKRIRHRNLI 487
+IG G V R+ Q + VA+K Y E + F E +M + H N+I
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL-HFGYS 546
++ + +V EYM +GSL+ L + + I Q + ++ V + + YL GY
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY- 172
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKE-DQSLTQTQTLATIGYMAP 599
+H DL NVL+D N+V +SDFG+++ L + D + T T I + AP
Sbjct: 173 ---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAP 223
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARI----QDGIEVAVKVFDLQY-EGAFKSFDIECDMMKRIRHRNLI 487
+IG G V R+ Q + VA+K Y E + F E +M + H N+I
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL-HFGYS 546
++ + +V EYM +GSL+ L + + I Q + ++ V + + YL GY
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY- 172
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKE-DQSLTQTQTLATIGYMAP 599
+H DL NVL+D N+V +SDFG+++ L + D + T T I + AP
Sbjct: 173 ---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP 223
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 21/182 (11%)
Query: 436 IGRGGVASVYKARI------QDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+G G V+ A QD I VAVK + A K F E +++ ++H +++K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 490 ISSCSNDDFKALVLEYMPHGSLEKCLYSSN------------YILDIFQRLNIMIDVASA 537
C D +V EYM HG L K L + L Q L+I +A+
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 597
+ YL S +H DL N L+ +N++ + DFGM++ + D T+ I +M
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 598 AP 599
P
Sbjct: 198 PP 199
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 436 IGRGGVASVYKARIQD---GIEVAVKVFDL---QYEGAFKSFDIECDMMKRIRHRNLIKI 489
+G GG+++VY A +D I+VA+K + + E K F+ E ++ H+N++ +
Sbjct: 19 LGGGGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 490 ISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPI 549
I DD LV+EY+ +L + + S+ L + +N + +++ H + I
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAH---DMRI 132
Query: 550 IHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT-QTLATIGYMAP 599
+H D+KP N+L+D N + DFG+AK L + SLTQT L T+ Y +P
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKAL--SETSLTQTNHVLGTVQYFSP 181
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 152
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 206
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 127
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 181
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 150
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKARIQDGIE-VAVKVFDLQY-----EGAFKSFDIE 474
L++ + + + +G G A+VYKAR ++ + VA+K L + +G ++ E
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE 62
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+++ + H N+I ++ + + +LV ++M LE + ++ +L M+
Sbjct: 63 IKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMT 121
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
LEYLH + I+H DLKPNN+LLD+N V L+DFG+AK +++ + T
Sbjct: 122 LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--XHQVVTR 176
Query: 595 GYMAP 599
Y AP
Sbjct: 177 WYRAP 181
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 124
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 146
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 150
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 146
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 126
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 180
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 125
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 179
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 131
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 424 FQATNGFSENNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMM 478
ATN S + ++G G V R++ I VA+K + Y E + F E +M
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 479 KRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
+ H N+I++ + +V EYM +GSL+ L + + Q + ++ +AS +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 539 EYL-HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+YL GY +H DL N+L++ N+V +SDFG+A+ L + ++ T+
Sbjct: 161 KYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 433 NNLIGRGGVASVYKARIQDGIEVAVKVF----DLQYEGAFKSFDIECDMMKRIRHRNLIK 488
+IG GG VY+A G EVAVK D ++ E + ++H N+I
Sbjct: 12 EEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ C + LV+E+ G L + L DI +N + +A + YLH VP
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIVP 128
Query: 549 IIHCDLKPNNVLLDD--------NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLK +N+L+ N + ++DFG+A +E T+ +MAP
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLA----REWHRTTKMSAAGAYAWMAP 183
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++V AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 154
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 155 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 424 FQATNGFSENNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMM 478
ATN S + ++G G V R++ I VA+K + Y E + F E +M
Sbjct: 30 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 479 KRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
+ H N+I++ + +V EYM +GSL+ L + + Q + ++ +AS +
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 148
Query: 539 EYL-HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+YL GY +H DL N+L++ N+V +SDFG+++ L + ++ T+
Sbjct: 149 KYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQY---EGAFKSFDIECDMMKRIRHRN 485
F ++G G ++ AR + E A+K+ + ++ E E D+M R+ H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+K+ + +D+ L Y +G L K + + R ++ SALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP N+LL+++M ++DFG AK L E + + T Y++P
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 24/185 (12%)
Query: 436 IGRGGVASVYKARI------QDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+G G V+ A +D + VAVK A K F E +++ ++H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 490 ISSCSNDDFKALVLEYMPHGSLEKCLYS---------------SNYILDIFQRLNIMIDV 534
C + D +V EYM HG L K L + + L + Q L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
AS + YL S +H DL N L+ N++ + DFGM++ + D T+ I
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 595 GYMAP 599
+M P
Sbjct: 200 RWMPP 204
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 424 FQATNGFSENNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMM 478
ATN S + ++G G V R++ I VA+K + Y E + F E +M
Sbjct: 13 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 479 KRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
+ H N+I++ + +V EYM +GSL+ L + + Q + ++ +AS +
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 131
Query: 539 EYL-HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+YL GY +H DL N+L++ N+V +SDFG+++ L + ++ T+
Sbjct: 132 KYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 424 FQATNGFSENNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMM 478
ATN S + ++G G V R++ I VA+K + Y E + F E +M
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 479 KRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
+ H N+I++ + +V EYM +GSL+ L + + Q + ++ +AS +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 539 EYL-HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+YL GY +H DL N+L++ N+V +SDFG+++ L + ++ T+
Sbjct: 161 KYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 424 FQATNGFSENNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMM 478
ATN S + ++G G V R++ I VA+K + Y E + F E +M
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 479 KRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
+ H N+I++ + +V EYM +GSL+ L + + Q + ++ +AS +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 539 EYL-HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+YL GY +H DL N+L++ N+V +SDFG+++ L + ++ T+
Sbjct: 161 KYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 424 FQATNGFSENNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMM 478
ATN S + ++G G V R++ I VA+K + Y E + F E +M
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 479 KRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
+ H N+I++ + +V EYM +GSL+ L + + Q + ++ +AS +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 539 EYL-HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+YL GY +H DL N+L++ N+V +SDFG+++ L + ++ T+
Sbjct: 161 KYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 34/196 (17%)
Query: 425 QATNGFSEN----NLIGRGGVASVYKARIQDGI--EVAVKVFDLQYEGAFKSFDI----- 473
+T+GF EN ++GRG V+SV + I E AVK+ D+ G+F + ++
Sbjct: 10 HSTHGFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 474 ----ECDMMKRIR-HRNLIKIISSCSNDDFKALVLEYMPHGSL-----EKCLYSSNYILD 523
E D+++++ H N+I++ + + F LV + M G L EK S
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 524 IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQ 583
I + L ++V AL L+ I+H DLKP N+LLDD+M L+DFG + L D
Sbjct: 129 IMRAL---LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DP 176
Query: 584 SLTQTQTLATIGYMAP 599
+ T Y+AP
Sbjct: 177 GEKLREVCGTPSYLAP 192
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 424 FQATNGFSENNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMM 478
ATN S + ++G G V R++ I VA+K + Y E + F E +M
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 479 KRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
+ H N+I++ + +V EYM +GSL+ L + + Q + ++ +AS +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 539 EYL-HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+YL GY +H DL N+L++ N+V +SDFG+++ L + ++ T+
Sbjct: 161 KYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 424 FQATNGFSENNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMM 478
ATN S + ++G G V R++ I VA+K + Y E + F E +M
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 479 KRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
+ H N+I++ + +V EYM +GSL+ L + + Q + ++ +AS +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 539 EYL-HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+YL GY +H DL N+L++ N+V +SDFG+ + L + ++ T+
Sbjct: 161 KYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 11/172 (6%)
Query: 424 FQATNGFSENNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMM 478
ATN S + ++G G V R++ I VA+K + Y E + F E +M
Sbjct: 40 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 479 KRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
+ H N+I++ + +V EYM +GSL+ L + + Q + ++ +AS +
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 158
Query: 539 EYL-HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+YL GY +H DL N+L++ N+V +SDFG+++ L + ++ T+
Sbjct: 159 KYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 431 SENNLIGRGGVASVYKARIQDG-----IEVAVKVFDLQY-EGAFKSFDIECDMMKRIRHR 484
+ +IG G VYK ++ + VA+K Y E F E +M + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 485 NLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG 544
N+I++ S ++ EYM +G+L+K L + + Q + ++ +A+ ++YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA-- 164
Query: 545 YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
++ +H DL N+L++ N+V +SDFG+++ +L++D T T + I
Sbjct: 165 -NMNYVHRDLAARNILVNSNLVCKVSDFGLSR-VLEDDPEATYTTSGGKI 212
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDI--ECDMMKRIRHRNLIKIISSC 493
IG G V+ + +VA+K EGA D E ++M ++ H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
LV E+M HG L L + + L + +DV + YL +IH D
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRD 128
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N V +SDFGM + +L +DQ + T T + + +P
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 173
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 34/196 (17%)
Query: 425 QATNGFSEN----NLIGRGGVASVYKARIQDGI--EVAVKVFDLQYEGAFKSFDI----- 473
+T+GF EN ++GRG V+SV + I E AVK+ D+ G+F + ++
Sbjct: 10 HSTHGFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 474 ----ECDMMKRIR-HRNLIKIISSCSNDDFKALVLEYMPHGSL-----EKCLYSSNYILD 523
E D+++++ H N+I++ + + F LV + M G L EK S
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 524 IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQ 583
I + L ++V AL L+ I+H DLKP N+LLDD+M L+DFG + L D
Sbjct: 129 IMRAL---LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DP 176
Query: 584 SLTQTQTLATIGYMAP 599
T Y+AP
Sbjct: 177 GEKLRSVCGTPSYLAP 192
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 29/187 (15%)
Query: 436 IGRGGVASVYKARI------QDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+G G V+ A QD + VAVK E A + F E +++ ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 490 ISSCSNDDFKALVLEYMPHGSLEKCLYS--------------SNYILDIFQRLNIMIDVA 535
C+ +V EYM HG L + L S + L + Q L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 536 SALEY---LHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 592
+ + Y LHF +H DL N L+ +V + DFGM++ + D +T+
Sbjct: 169 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 593 TIGYMAP 599
I +M P
Sbjct: 223 PIRWMPP 229
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 9/171 (5%)
Query: 424 FQATNGFSENNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMM 478
ATN S + ++G G V R++ I VA+K + Y E + F E +M
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 479 KRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
+ H N+I++ + +V EYM +GSL+ L + + Q + ++ +AS +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 539 EYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+YL + +H DL N+L++ N+V +SDFG+++ L + ++ T+
Sbjct: 161 KYLS---DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDI--ECDMMKRIRHRNLIKIISSC 493
IG G V+ + +VA+K EGA D E ++M ++ H L+++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
LV E+M HG L L + + L + +DV + YL +IH D
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRD 131
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N V +SDFGM + +L +DQ + T T + + +P
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 176
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDI--ECDMMKRIRHRNLIKIISSC 493
IG G V+ + +VA+K EGA D E ++M ++ H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
LV E+M HG L L + + L + +DV + YL +IH D
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRD 128
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N V +SDFGM + +L +DQ + T T + + +P
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 173
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDI--ECDMMKRIRHRNLIKIISSC 493
IG G V+ + +VA+K EGA D E ++M ++ H L+++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
LV E+M HG L L + + L + +DV + YL +IH D
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRD 126
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N V +SDFGM + +L +DQ + T T + + +P
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 171
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 29/187 (15%)
Query: 436 IGRGGVASVYKARI------QDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+G G V+ A QD + VAVK E A + F E +++ ++H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 490 ISSCSNDDFKALVLEYMPHGSLEKCLYS--------------SNYILDIFQRLNIMIDVA 535
C+ +V EYM HG L + L S + L + Q L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 536 SALEY---LHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 592
+ + Y LHF +H DL N L+ +V + DFGM++ + D +T+
Sbjct: 140 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 593 TIGYMAP 599
I +M P
Sbjct: 194 PIRWMPP 200
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDI--ECDMMKRIRHRNLIKIISSC 493
IG G V+ + +VA+K EGA D E ++M ++ H L+++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
LV E+M HG L L + + L + +DV + YL +IH D
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRD 129
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N V +SDFGM + +L +DQ + T T + + +P
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 174
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 29/187 (15%)
Query: 436 IGRGGVASVYKARI------QDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+G G V+ A QD + VAVK E A + F E +++ ++H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 490 ISSCSNDDFKALVLEYMPHGSLEKCLYS--------------SNYILDIFQRLNIMIDVA 535
C+ +V EYM HG L + L S + L + Q L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 536 SALEY---LHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 592
+ + Y LHF +H DL N L+ +V + DFGM++ + D +T+
Sbjct: 146 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 593 TIGYMAP 599
I +M P
Sbjct: 200 PIRWMPP 206
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G +VYK + +VAVK+ ++ ++F E ++++ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ A+V ++ SL L++S ++ + ++I A ++YLH + IIH D
Sbjct: 90 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LK NN+ L ++ + DFG+A + S Q +I +MAP
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDI--ECDMMKRIRHRNLIKIISSC 493
IG G V+ + +VA+K EG+ D E ++M ++ H L+++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK---EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
LV E+M HG L L + + L + +DV + YL +IH D
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRD 148
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N V +SDFGM + +L +DQ + T T + + +P
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 193
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++EY+P+GSL L +D + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 595
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 145 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 200
Query: 596 YMAP 599
+ AP
Sbjct: 201 WYAP 204
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++EY+P+GSL L +D + L +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 595
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 145 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 200
Query: 596 YMAP 599
+ AP
Sbjct: 201 WYAP 204
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 23/188 (12%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDL-QYEGA------FKSFDIECDM 477
A N IG+GG V+K R ++D VA+K L EG F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 478 MKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
M + H N++K+ N +V+E++P G L L + + +L +M+D+A
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 538 LEYLHFGYSVPIIHCDLKPNNVL---LDDN--MVAHLSDFGMAKPLLKEDQSL-TQTQTL 591
+EY+ + PI+H DL+ N+ LD+N + A ++DFG+++ QS+ + + L
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------QSVHSVSGLL 187
Query: 592 ATIGYMAP 599
+MAP
Sbjct: 188 GNFQWMAP 195
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 92/192 (47%), Gaps = 34/192 (17%)
Query: 429 GFSEN----NLIGRGGVASVYKARIQDGI--EVAVKVFDLQYEGAFKSFDI--------- 473
GF EN ++GRG V+SV + I E AVK+ D+ G+F + ++
Sbjct: 1 GFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 59
Query: 474 ECDMMKRIR-HRNLIKIISSCSNDDFKALVLEYMPHGSL-----EKCLYSSNYILDIFQR 527
E D+++++ H N+I++ + + F LV + M G L EK S I +
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 528 LNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ 587
L ++V AL L+ I+H DLKP N+LLDD+M L+DFG + L D
Sbjct: 120 L---LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKL 167
Query: 588 TQTLATIGYMAP 599
+ T Y+AP
Sbjct: 168 REVCGTPSYLAP 179
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++EY+P+GSL L +D + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 595
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 127 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 182
Query: 596 YMAP 599
+ AP
Sbjct: 183 WYAP 186
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++EY+P+GSL L +D + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 595
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 127 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 182
Query: 596 YMAP 599
+ AP
Sbjct: 183 WYAP 186
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++EY+P+GSL L +D + L +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 595
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 127 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEFFKVKEPGESPIF 182
Query: 596 YMAP 599
+ AP
Sbjct: 183 WYAP 186
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++EY+P+GSL L +D + L +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 129
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 595
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 130 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 185
Query: 596 YMAP 599
+ AP
Sbjct: 186 WYAP 189
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 97
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++EY+P+GSL L +D + L +
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 157
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 595
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 158 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 213
Query: 596 YMAP 599
+ AP
Sbjct: 214 WYAP 217
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 19/181 (10%)
Query: 430 FSENNLIGRGGVASVYKARIQ--DGIEVAVKVFDL--------QYEGAFKSFDIECDMMK 479
+ ++IGRG V+SV + + G E AVK+ ++ Q E ++ E +++
Sbjct: 96 YDPKDVIGRG-VSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 480 RIR-HRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
++ H ++I +I S + F LV + M G L L + L + +IM + A+
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAV 213
Query: 539 EYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
+LH I+H DLKP N+LLDDNM LSDFG + L + + T GY+A
Sbjct: 214 SFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHL---EPGEKLRELCGTPGYLA 267
Query: 599 P 599
P
Sbjct: 268 P 268
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 14 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 73
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++EY+P+GSL L +D + L +
Sbjct: 74 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 133
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 595
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 134 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 189
Query: 596 YMAP 599
+ AP
Sbjct: 190 WYAP 193
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 424 FQATNGFSENNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMM 478
ATN S + ++G G V R++ I VA+K + Y E + F E +M
Sbjct: 13 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 479 KRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
+ H N+I++ + +V E M +GSL+ L + + Q + ++ +AS +
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 131
Query: 539 EYL-HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+YL GY +H DL N+L++ N+V +SDFG+++ L + ++ T+
Sbjct: 132 KYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 424 FQATNGFSENNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMM 478
ATN S + ++G G V R++ I VA+K + Y E + F E +M
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 479 KRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
+ H N+I++ + +V E M +GSL+ L + + Q + ++ +AS +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 539 EYL-HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+YL GY +H DL N+L++ N+V +SDFG+++ L + ++ T+
Sbjct: 161 KYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 12 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 71
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++EY+P+GSL L +D + L +
Sbjct: 72 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 131
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 595
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 132 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 187
Query: 596 YMAP 599
+ AP
Sbjct: 188 WYAP 191
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 11 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 70
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++EY+P+GSL L +D + L +
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 130
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 595
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 131 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 186
Query: 596 YMAP 599
+ AP
Sbjct: 187 WYAP 190
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 13 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 72
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++EY+P+GSL L +D + L +
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 132
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 595
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 133 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 188
Query: 596 YMAP 599
+ AP
Sbjct: 189 WYAP 192
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 6 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 65
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++EY+P+GSL L +D + L +
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 125
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 595
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 126 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 181
Query: 596 YMAP 599
+ AP
Sbjct: 182 WYAP 185
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 64
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++EY+P+GSL L +D + L +
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 595
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 125 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 180
Query: 596 YMAP 599
+ AP
Sbjct: 181 WYAP 184
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++EY+P+GSL L + +D + L +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKG 129
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 595
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 130 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 185
Query: 596 YMAP 599
+ AP
Sbjct: 186 WYAP 189
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G +VYK + +VAVK+ ++ ++F E ++++ RH N++ +
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ A+V ++ SL L++S ++ + ++I A ++YLH + IIH D
Sbjct: 78 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 133
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LK NN+ L ++ + DFG+A + S Q +I +MAP
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 179
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G +VYK + +VAVK+ ++ ++F E ++++ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ A+V ++ SL L++S ++ + ++I A ++YLH + IIH D
Sbjct: 90 TAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LK NN+ L ++ + DFG+A + S Q +I +MAP
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 13/170 (7%)
Query: 433 NNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISS 492
++GRG V KA+ + +VA+K ++ E K+F +E + R+ H N++K+ +
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYI--LDIFQRLNIMIDVASALEYLHFGYSVPII 550
C N LV+EY GSL L+ + + ++ + + + YLH +I
Sbjct: 71 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 551 HCDLKPNNVLL-DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP N+LL V + DFG A D T + +MAP
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAP 173
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 23/188 (12%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDL-QYEGA------FKSFDIECDM 477
A N IG+GG V+K R ++D VA+K L EG F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 478 MKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
M + H N++K+ N +V+E++P G L L + + +L +M+D+A
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 538 LEYLHFGYSVPIIHCDLKPNNVL---LDDN--MVAHLSDFGMAKPLLKEDQSL-TQTQTL 591
+EY+ + PI+H DL+ N+ LD+N + A ++DFG ++ QS+ + + L
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ------QSVHSVSGLL 187
Query: 592 ATIGYMAP 599
+MAP
Sbjct: 188 GNFQWMAP 195
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 13/170 (7%)
Query: 433 NNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISS 492
++GRG V KA+ + +VA+K ++ E K+F +E + R+ H N++K+ +
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYI--LDIFQRLNIMIDVASALEYLHFGYSVPII 550
C N LV+EY GSL L+ + + ++ + + + YLH +I
Sbjct: 70 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 551 HCDLKPNNVLL-DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP N+LL V + DFG A D T + +MAP
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAP 172
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G +VYK + +VAVK+ ++ ++F E ++++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LK NN+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 175
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 10 FEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++E++P+GSL + L +D + L +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKG 129
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIG 595
+EYL + IH DL N+L+++ + DFG+ K +L +D+ + + + I
Sbjct: 130 MEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIF 185
Query: 596 YMAP 599
+ AP
Sbjct: 186 WYAP 189
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G +VYK + +VAVK+ ++ ++F E ++++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 102 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LK NN+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 203
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G +VYK + +VAVK+ ++ ++F E ++++ RH N++ +
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 94 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 149
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LK NN+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 195
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 9/171 (5%)
Query: 424 FQATNGFSENNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMM 478
ATN S + ++G G V R++ I VA+K + Y E + F E +M
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 479 KRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
+ H N+I++ + +V E M +GSL+ L + + Q + ++ +AS +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 539 EYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+YL + +H DL N+L++ N+V +SDFG+++ L + ++ T+
Sbjct: 161 KYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 11/180 (6%)
Query: 424 FQATNGFSENNLIGRGGVASVYKARIQD-GIEVAVKVF-DLQYEGAFKSFDI-ECDMMKR 480
FQ+ + L+G G V K R +D G VA+K F + + K + E ++K+
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 481 IRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKC-LYSSNYILDIFQRLNIMIDVASALE 539
+RH NL+ ++ C LV E++ H L+ L+ + + Q+ I +
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI-----IN 135
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ F +S IIH D+KP N+L+ + V L DFG A+ L + +AT Y AP
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAP 193
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G +VYK + +VAVK+ ++ ++F E ++++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LK NN+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G +VYK + +VAVK+ ++ ++F E ++++ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LK NN+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 434 NLIGRGGVASVYKARIQDGIEVAVKVFDLQY--EGAFKSFDIECDMMKRIRHRNLIKIIS 491
LIG+G VY R EVA+++ D++ E K+F E ++ RH N++ +
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 492 SCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIH 551
+C + A++ +L + + +LD+ + I ++ + YLH + I+H
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILH 153
Query: 552 CDLKPNNVLLDDNMVAHLSDFGM 574
DLK NV D+ V ++DFG+
Sbjct: 154 KDLKSKNVFYDNGKVV-ITDFGL 175
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G +VYK + +VAVK+ ++ ++F E ++++ RH N++ +
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 76 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 131
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LK NN+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 177
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G +VYK + +VAVK+ ++ ++F E ++++ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LK NN+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G +VYK + +VAVK+ ++ ++F E ++++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 102 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LK NN+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 203
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G +VYK + +VAVK+ ++ ++F E ++++ RH N++ +
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 101 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 156
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LK NN+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 202
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVFDLQY--EGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG+G A V AR I G EVAVK+ D + + E +MK + H N++K+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
+ LV+EY G + L + ++ + R + SA++Y H + I+H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 130
Query: 553 DLKPNNVLLDDNMVAHLSDFGMA 575
DLK N+LLD +M ++DFG +
Sbjct: 131 DLKAENLLLDADMNIKIADFGFS 153
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
Query: 428 NGFSENNLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGA---FKSFDIECDMMKRIRH 483
N ++IG G V KARI+ DG+ + + ++ + + F E +++ ++ H
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 484 R-NLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYI---------------LDIFQR 527
N+I ++ +C + + L +EY PHG+L L S + L Q
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 528 LNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 576
L+ DVA ++YL IH DL N+L+ +N VA ++DFG+++
Sbjct: 145 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
Query: 428 NGFSENNLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGA---FKSFDIECDMMKRIRH 483
N ++IG G V KARI+ DG+ + + ++ + + F E +++ ++ H
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 484 R-NLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYI---------------LDIFQR 527
N+I ++ +C + + L +EY PHG+L L S + L Q
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 528 LNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 576
L+ DVA ++YL IH DL N+L+ +N VA ++DFG+++
Sbjct: 135 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G +VYK + +VAVK+ ++ ++F E ++++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ A+V ++ SL L+ ++ + ++I A ++YLH + IIH D
Sbjct: 74 TAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LK NN+ L +++ + DFG+A + S Q +I +MAP
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 430 FSENNLIGRGGVASVYKAR-IQDGIEVA---VKVFDLQYEGAFKSFDIECDMMKRIRHRN 485
F IGRG + VY+A + DG+ VA V++FDL A E D++K++ H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIM---IDVASALEYLH 542
+IK +S D+ +VLE G L + + + + + + SALE++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 543 FGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S ++H D+KP NV + V L D G+ + ++ + T YM+P
Sbjct: 154 ---SRRVMHRDIKPANVFITATGVVKLGDLGLGR--FFSSKTTAAHSLVGTPYYMSP 205
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQD--GIEVAVKVFDLQYEGAFKSFDIECDMMK 479
F E +L +G+G SV R +QD G VAVK E + F+ E +++K
Sbjct: 8 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 67
Query: 480 RIRHRNLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++H N++K C + + L++EY+P+GSL L +D + L +
Sbjct: 68 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 127
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQ 583
+EYL + IH +L N+L+++ + DFG+ K L ++ +
Sbjct: 128 MEYLG---TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE 170
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 7/158 (4%)
Query: 425 QATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFD---LQYEGAFKSFDIECDMMKR 480
+ F NL+G+G A VY+A I G+EVA+K+ D + G + E + +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 481 IRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 540
++H +++++ + + ++ LVLE +G + + L + + + M + + + Y
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLY 127
Query: 541 LHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPL 578
LH S I+H DL +N+LL NM ++DFG+A L
Sbjct: 128 LH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 23/188 (12%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDL-QYEGA------FKSFDIECDM 477
A N IG+GG V+K R ++D VA+K L EG F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 478 MKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
M + H N++K+ N +V+E++P G L L + + +L +M+D+A
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 538 LEYLHFGYSVPIIHCDLKPNNVL---LDDN--MVAHLSDFGMAKPLLKEDQSL-TQTQTL 591
+EY+ + PI+H DL+ N+ LD+N + A ++DF +++ QS+ + + L
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------QSVHSVSGLL 187
Query: 592 ATIGYMAP 599
+MAP
Sbjct: 188 GNFQWMAP 195
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 7/162 (4%)
Query: 434 NLIGRGGVASVYKARIQDGIEVAVKVFDLQY-EGAFKSFDIECDMMKRIRHRNLIKIISS 492
++G+G K ++ EV V +++ E ++F E +M+ + H N++K I
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
D + EY+ G+L + S + QR++ D+AS + YLH S+ IIH
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHR 132
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
DL +N L+ +N ++DFG+A+ ++ E TQ + L ++
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEK---TQPEGLRSL 171
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 494 SNDDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM GSL L + L + Q +++ +AS + Y+ + +H
Sbjct: 73 SEEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 128
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 129 DLRAANILVGENLVCKVADFGLAR--LIEDNEXTARQGAKFPIKWTAP 174
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKS--FDIECDMMKRIRHRNLIKIISSC 493
+G G V + + +VAVK+ EG+ F E M ++ H L+K C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK---EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
S + +V EY+ +G L L S L+ Q L + DV + +L S IH D
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRD 129
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+D ++ +SDFGM + +L +DQ ++ T + + AP
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAP 174
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVFDLQY--EGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG+G A V AR I G EVAVK+ D + + E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
+ LV+EY G + L + + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 553 DLKPNNVLLDDNMVAHLSDFGMA 575
DLK N+LLD +M ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 494 SNDDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM GSL L + L + Q +++ +AS + Y+ + +H
Sbjct: 332 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 387
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 388 DLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAP 433
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVFDLQY--EGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG+G A V AR I G EVAVK+ D + + E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
+ LV+EY G + L + + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 553 DLKPNNVLLDDNMVAHLSDFGMA 575
DLK N+LLD +M ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 433 NNLIGRGGVASVYKARIQDGIE----VAVKVFDLQY-EGAFKSFDIECDMMKRIRHRNLI 487
+IG G V + R++ + VA+K Y E + F E +M + H N+I
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
++ +N ++ E+M +G+L+ L ++ + Q + ++ +AS + YL +
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EM 137
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA---TIGYMAP 599
+H DL N+L++ N+V +SDFG+++ L + T+T +L I + AP
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 494 SNDDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM GSL L + L + Q +++ +AS + Y+ + +H
Sbjct: 249 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 305 DLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAP 350
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ +L ++ +T A + +MA
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 494 SNDDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM GSL L + L + Q +++ +AS + Y+ + +H
Sbjct: 249 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 305 DLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAP 350
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVFDLQY--EGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG+G A V AR I G EVAVK+ D + + E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
+ LV+EY G + L + + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 553 DLKPNNVLLDDNMVAHLSDFGMA 575
DLK N+LLD +M ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V+EYM GSL L L + Q +++ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 139 DLRAANILVGENLVCKVADFGLAR--LIEDNEXTARQGAKFPIKWTAP 184
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 11/171 (6%)
Query: 433 NNLIGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGA-FKSFDIECDMMKRIRHRNLIKII 490
+ IG GG A V A I G VA+K+ D G+ E + +K +RH+++ ++
Sbjct: 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLY 74
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF-GYSVPI 549
+ +VLEY P G L + S + + + R+ + + SA+ Y+H GY+
Sbjct: 75 HVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQGYA--- 130
Query: 550 IHCDLKPNNVLLDDNMVAHLSDFGM-AKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP N+L D+ L DFG+ AKP +D L QT ++ Y AP
Sbjct: 131 -HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL-QT-CCGSLAYAAP 178
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
Query: 428 NGFSENNLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGA---FKSFDIECDMMKRIRH 483
N ++IG G V KARI+ DG+ + + ++ + + F E +++ ++ H
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 484 R-NLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYI---------------LDIFQR 527
N+I ++ +C + + L +EY PHG+L L S + L Q
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 528 LNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 576
L+ DVA ++YL IH +L N+L+ +N VA ++DFG+++
Sbjct: 142 LHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK+IRH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM GSL L L + Q +++ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 139 DLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAP 184
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V+EYM GSL L L + Q +++ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 139 DLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAP 184
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA ++YL S
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA ++YL S
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 170
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 25/180 (13%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGA-FKSFDIECDMMKRIRHRNLIKIISSCS 494
IG+G V++ + + G EVAVK+F + E + F+ +I +M +RH N++ I++ +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAADN 93
Query: 495 NDDFKA----LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----- 545
D+ LV +Y HGSL Y + Y + + + + + AS L +LH
Sbjct: 94 KDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 151
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA------TIGYMAP 599
I H DLK N+L+ N ++D G+A ++ D S T T +A T YMAP
Sbjct: 152 KPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHD-SATDTIDIAPNHRVGTKRYMAP 207
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 494 SNDDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM GSL L + L + Q +++ +AS + Y+ + +H
Sbjct: 76 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 131
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 132 DLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAP 177
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVFDLQY--EGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG+G A V AR + G EVAVK+ D + + E +MK + H N++K+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
+ LV+EY G + L + + + R + SA++Y H Y I+H
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY---IVHR 138
Query: 553 DLKPNNVLLDDNMVAHLSDFGMA 575
DLK N+LLD +M ++DFG +
Sbjct: 139 DLKAENLLLDGDMNIKIADFGFS 161
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA ++YL S
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 169
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 25/180 (13%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGA-FKSFDIECDMMKRIRHRNLIKIISSCS 494
IG+G V++ + + G EVAVK+F + E + F+ +I +M +RH N++ I++ +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAADN 106
Query: 495 NDDFKA----LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----- 545
D+ LV +Y HGSL Y + Y + + + + + AS L +LH
Sbjct: 107 KDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 164
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA------TIGYMAP 599
I H DLK N+L+ N ++D G+A ++ D S T T +A T YMAP
Sbjct: 165 KPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHD-SATDTIDIAPNHRVGTKRYMAP 220
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKS--FDIECDMMKRIRHRNLIKIISSCS 494
G+ GV K R Q +VA+K+ EG+ F E +M + H L+++ C+
Sbjct: 35 GQFGVVKYGKWRGQ--YDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
++ EYM +G L L + Q L + DV A+EYL S +H DL
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQS 584
N L++D V +SDFG+++ +L ++++
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEET 176
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA ++YL S
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 146
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA ++YL S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 149
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA ++YL S
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 148
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
Query: 180 NKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWN-LKYILYLNLSSNSFTGPLPLEIG 238
NKLS F LT LR LYL N+L ++P+ ++ LK + L ++ N LP+ +
Sbjct: 47 NKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQA-LPIGVF 105
Query: 239 NLRV-LVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSI-GGLIDLKSLDL 296
+ V L ++ L N P L L YL L YN LQ S+P + L LK L L
Sbjct: 106 DQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRL 164
Query: 297 SNNNISGAIPISLEKLLDLKYINVSFNKLEGEIPREGPF 335
NN + + +KL +LK + + N+L+ +P EG F
Sbjct: 165 YNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVP-EGAF 201
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Query: 1 LLLWGNNFSGTIPSFIFNASK-LSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSS 59
LL +N T+P+ IF K L L + N F L NL L L+ N L S
Sbjct: 65 LLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSL 124
Query: 60 TPKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPE-EI 118
P++ SL+ L YLS N L LP+ + + S++ ++N N +PE
Sbjct: 125 PPRV--FDSLTK---LTYLSLGYNELQS-LPKGVFDKLTSLKELRLYN-NQLKRVPEGAF 177
Query: 119 SNLTNLTTIYLGGNKL 134
LT L T+ L N+L
Sbjct: 178 DKLTELKTLKLDNNQL 193
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Query: 76 KYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEI-SNLTNLTTIYLGGNKL 134
K L +N L + +A L++ + + ++ N N ++P I L NL T+++ NKL
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTK-LRLLYL-NDNKLQTLPAGIFKELKNLETLWVTDNKL 97
Query: 135 NGSIPIAXXXXXXXXXXXXED-NQLEGSIPXXXXXXXXXXXXXXGGNKLSGFVPACFGNL 193
++PI D NQL+ P G N+L F L
Sbjct: 98 Q-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKL 156
Query: 194 TSLRNLYLGSNQLTSIPS 211
TSL+ L L +NQL +P
Sbjct: 157 TSLKELRLYNNQLKRVPE 174
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 245 QIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSI-GGLIDLKSLDLSNNNISG 303
++DL N S L L+ L+L N+LQ ++P I L +L++L +++N +
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQ- 98
Query: 304 AIPISL-EKLLDLKYINVSFNKLEGEIPR 331
A+PI + ++L++L + + N+L+ PR
Sbjct: 99 ALPIGVFDQLVNLAELRLDRNQLKSLPPR 127
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVFDLQY--EGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG+G A V AR I G EVAV++ D + + E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
+ LV+EY G + L + + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 553 DLKPNNVLLDDNMVAHLSDFGMA 575
DLK N+LLD +M ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 494 SNDDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM GSL L + L + Q +++ +AS + Y+ + +H
Sbjct: 80 SEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHR 135
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 136 DLRAANILVGENLVCKVADFGLAR--LIEDNEWTARQGAKFPIKWTAP 181
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 25/180 (13%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGA-FKSFDIECDMMKRIRHRNLIKIISSCS 494
IG+G V++ + + G EVAVK+F + E + F+ +I +M +RH N++ I++ +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAADN 73
Query: 495 NDDFKA----LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----- 545
D+ LV +Y HGSL Y + Y + + + + + AS L +LH
Sbjct: 74 KDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 131
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA------TIGYMAP 599
I H DLK N+L+ N ++D G+A ++ D S T T +A T YMAP
Sbjct: 132 KPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHD-SATDTIDIAPNHRVGTKRYMAP 187
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 25/180 (13%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGA-FKSFDIECDMMKRIRHRNLIKIISSCS 494
IG+G V++ + + G EVAVK+F + E + F+ +I +M +RH N++ I++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAADN 70
Query: 495 NDDFKA----LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----- 545
D+ LV +Y HGSL Y + Y + + + + + AS L +LH
Sbjct: 71 KDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 128
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA------TIGYMAP 599
I H DLK N+L+ N ++D G+A ++ D S T T +A T YMAP
Sbjct: 129 KPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHD-SATDTIDIAPNHRVGTKRYMAP 184
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 25/180 (13%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGA-FKSFDIECDMMKRIRHRNLIKIISSCS 494
IG+G V++ + + G EVAVK+F + E + F+ +I +M +RH N++ I++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAADN 68
Query: 495 NDDFKA----LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----- 545
D+ LV +Y HGSL Y + Y + + + + + AS L +LH
Sbjct: 69 KDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 126
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA------TIGYMAP 599
I H DLK N+L+ N ++D G+A ++ D S T T +A T YMAP
Sbjct: 127 KPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHD-SATDTIDIAPNHRVGTKRYMAP 182
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 494 SNDDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM GSL L + L + Q +++ +AS + Y+ + +H
Sbjct: 249 SEEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 305 DLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAP 350
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVFDLQY--EGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG+G A V AR I G EVAV++ D + + E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
+ LV+EY G + L + + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 553 DLKPNNVLLDDNMVAHLSDFGMA 575
DLK N+LLD +M ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 25/180 (13%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGA-FKSFDIECDMMKRIRHRNLIKIISSCS 494
IG+G V++ + + G EVAVK+F + E + F+ +I +M +RH N++ I++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAADN 67
Query: 495 NDDFKA----LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----- 545
D+ LV +Y HGSL Y + Y + + + + + AS L +LH
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 125
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA------TIGYMAP 599
I H DLK N+L+ N ++D G+A ++ D S T T +A T YMAP
Sbjct: 126 KPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHD-SATDTIDIAPNHRVGTKRYMAP 181
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 433 NNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMMKRIRHRNLI 487
+IG G V R++ + VA+K + Y E + F E +M + H N++
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL-HFGYS 546
+ + +V+E+M +G+L+ L + + Q + ++ +A+ + YL GY
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY- 166
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
+H DL N+L++ N+V +SDFG+++ ++++D T T I
Sbjct: 167 ---VHRDLAARNILVNSNLVCKVSDFGLSR-VIEDDPEAVYTTTGGKI 210
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 433 NNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMMKRIRHRNLI 487
+IG G V R++ + VA+K + Y E + F E +M + H N+I
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL-HFGYS 546
+ + +V EYM +GSL+ L ++ + Q + ++ +++ ++YL GY
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY- 145
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+H DL N+L++ N+V +SDFG+++ L + ++ T+
Sbjct: 146 ---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 185
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM GSL L L + Q +++ +AS + Y+ + +H
Sbjct: 72 SEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 127
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 128 DLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAP 173
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 446 KARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRI-RHRNLIKIISSCSNDDFKALVL 503
K + ++ + VAVK+ D E E +MMK I +H+N+I ++ +C+ D +++
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 120
Query: 504 EYMPHGSLEKCLYSS-----NYILDI---------FQRL-NIMIDVASALEYLHFGYSVP 548
EY G+L + L + Y DI F+ L + +A +EYL S
Sbjct: 121 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQK 177
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL NVL+ +N V ++DFG+A+ + D T + +MAP
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAP 228
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM GSL L L + Q +++ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 139 DLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAP 184
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
IG+G +VY A + G EVA++ +LQ + + E +M+ ++ N++ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
D +V+EY+ GSL + + +D Q + + ALE+LH S +IH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K +N+LL + L+DFG + E +++ + T +MAP
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAP 185
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM GSL L L + Q +++ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 139 DLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAP 184
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 494 SNDDFKALVLEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM GSL L + L + Q +++ +AS + Y+ + +H
Sbjct: 80 SEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHR 135
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 136 DLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAP 181
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM GSL L L + Q +++ +AS + Y+ + +H
Sbjct: 74 SEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 129
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 130 DLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAP 175
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 433 NNLIGRGGVASVYKARIQDGIE----VAVKVFDLQY-EGAFKSFDIECDMMKRIRHRNLI 487
+IG G V + R++ + VA+K Y E + F E +M + H N+I
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
++ +N ++ E+M +G+L+ L ++ + Q + ++ +AS + YL +
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EM 135
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA---TIGYMAP 599
+H DL N+L++ N+V +SDFG+++ L + T T +L I + AP
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 23/199 (11%)
Query: 405 ADANMPLVANLRRFTHLELFQATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF--- 460
A A MP R+FT + F +G+G +VY AR Q+ +A+KV
Sbjct: 3 ALAEMPK----RKFT-------IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKS 51
Query: 461 DLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNY 520
L+ EG E ++ +RH N++++ + + L+LE+ P G L K L
Sbjct: 52 QLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR 111
Query: 521 ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLK 580
D + M ++A AL Y H +IH D+KP N+L+ ++DFG +
Sbjct: 112 -FDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS----V 163
Query: 581 EDQSLTQTQTLATIGYMAP 599
SL + T+ Y+ P
Sbjct: 164 HAPSLRRRXMCGTLDYLPP 182
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 23/199 (11%)
Query: 405 ADANMPLVANLRRFTHLELFQATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF--- 460
A A MP R+FT + F +G+G +VY AR Q+ +A+KV
Sbjct: 2 ALAEMPK----RKFT-------IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKS 50
Query: 461 DLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNY 520
L+ EG E ++ +RH N++++ + + L+LE+ P G L K L
Sbjct: 51 QLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR 110
Query: 521 ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLK 580
D + M ++A AL Y H +IH D+KP N+L+ ++DFG +
Sbjct: 111 -FDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS----V 162
Query: 581 EDQSLTQTQTLATIGYMAP 599
SL + T+ Y+ P
Sbjct: 163 HAPSLRRRXMCGTLDYLPP 181
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 446 KARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRI-RHRNLIKIISSCSNDDFKALVL 503
K + ++ + VAVK+ D E E +MMK I +H+N+I ++ +C+ D +++
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 120
Query: 504 EYMPHGSLEKCLYSS-----NYILDI---------FQRL-NIMIDVASALEYLHFGYSVP 548
EY G+L + L + Y DI F+ L + +A +EYL S
Sbjct: 121 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQK 177
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL NVL+ +N V ++DFG+A+ + D T + +MAP
Sbjct: 178 CIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V+EYM G L L L + Q +++ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 139 DLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAP 184
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKS--FDIECDMMKRIRHRNLIKIISSCS 494
G+ GV K R Q +VA+K+ EG+ F E +M + H L+++ C+
Sbjct: 35 GQFGVVKYGKWRGQ--YDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
++ EYM +G L L + Q L + DV A+EYL S +H DL
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKED 582
N L++D V +SDFG+++ +L ++
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDE 174
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 436 IGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKS-FDIECDMMKRIRHRNLIKIISSC 493
IGRG V+ R++ D VAVK K+ F E ++K+ H N++++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ +V+E + G L + L + L ++ D A+ +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 554 LKPNNVLLDDNMVAHLSDFGMAK 576
L N L+ + V +SDFGM++
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR 261
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 446 KARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRI-RHRNLIKIISSCSNDDFKALVL 503
K + ++ + VAVK+ D E E +MMK I +H+N+I ++ +C+ D +++
Sbjct: 50 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 109
Query: 504 EYMPHGSLEKCLYSS-----NYILDI---------FQRL-NIMIDVASALEYLHFGYSVP 548
EY G+L + L + Y DI F+ L + +A +EYL S
Sbjct: 110 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQK 166
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL NVL+ +N V ++DFG+A+ + D T + +MAP
Sbjct: 167 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 217
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 446 KARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRI-RHRNLIKIISSCSNDDFKALVL 503
K + ++ + VAVK+ D E E +MMK I +H+N+I ++ +C+ D +++
Sbjct: 48 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 107
Query: 504 EYMPHGSLEKCLYSS-----NYILDI---------FQRL-NIMIDVASALEYLHFGYSVP 548
EY G+L + L + Y DI F+ L + +A +EYL S
Sbjct: 108 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQK 164
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL NVL+ +N V ++DFG+A+ + D T + +MAP
Sbjct: 165 CIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 215
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 446 KARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRI-RHRNLIKIISSCSNDDFKALVL 503
K + ++ + VAVK+ D E E +MMK I +H+N+I ++ +C+ D +++
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIV 120
Query: 504 EYMPHGSLEKCLYSS-----NYILDI---------FQRL-NIMIDVASALEYLHFGYSVP 548
EY G+L + L + Y DI F+ L + +A +EYL S
Sbjct: 121 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQK 177
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL NVL+ +N V ++DFG+A+ + D T + +MAP
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 446 KARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRI-RHRNLIKIISSCSNDDFKALVL 503
K + ++ + VAVK+ D E E +MMK I +H+N+I ++ +C+ D +++
Sbjct: 107 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 166
Query: 504 EYMPHGSLEKCLYSS-----NYILDI---------FQRL-NIMIDVASALEYLHFGYSVP 548
EY G+L + L + Y DI F+ L + +A +EYL S
Sbjct: 167 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQK 223
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL NVL+ +N V ++DFG+A+ + D T + +MAP
Sbjct: 224 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 274
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 436 IGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKS-FDIECDMMKRIRHRNLIKIISSC 493
IGRG V+ R++ D VAVK K+ F E ++K+ H N++++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ +V+E + G L + L + L ++ D A+ +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 554 LKPNNVLLDDNMVAHLSDFGMAK 576
L N L+ + V +SDFGM++
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR 261
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA +++L S
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 210
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 30/184 (16%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSS-----------NYILDIFQRLNIMIDVA 535
+K++ ++ LV E++ H L+K + +S +Y+ + Q L+
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLS------ 117
Query: 536 SALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG 595
F +S ++H DLKP N+L++ L+DFG+A+ + T T + T+
Sbjct: 118 -------FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLW 168
Query: 596 YMAP 599
Y AP
Sbjct: 169 YRAP 172
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y AP
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 179
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 446 KARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRI-RHRNLIKIISSCSNDDFKALVL 503
K + ++ + VAVK+ D E E +MMK I +H+N+I ++ +C+ D +++
Sbjct: 53 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 112
Query: 504 EYMPHGSLEKCLYSS-----NYILDI---------FQRL-NIMIDVASALEYLHFGYSVP 548
EY G+L + L + Y DI F+ L + +A +EYL S
Sbjct: 113 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQK 169
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL NVL+ +N V ++DFG+A+ + D T + +MAP
Sbjct: 170 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 220
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA +++L S
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 156
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 446 KARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRI-RHRNLIKIISSCSNDDFKALVL 503
K + ++ + VAVK+ D E E +MMK I +H+N+I ++ +C+ D +++
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIV 120
Query: 504 EYMPHGSLEKCLYSS-----NYILDI---------FQRL-NIMIDVASALEYLHFGYSVP 548
EY G+L + L + Y DI F+ L + +A +EYL S
Sbjct: 121 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQK 177
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL NVL+ +N V ++DFG+A+ + D T + +MAP
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 446 KARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRI-RHRNLIKIISSCSNDDFKALVL 503
K + ++ + VAVK+ D E E +MMK I +H+N+I ++ +C+ D +++
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 120
Query: 504 EYMPHGSLEKCLYSS-----NYILDI---------FQRL-NIMIDVASALEYLHFGYSVP 548
EY G+L + L + Y DI F+ L + +A +EYL S
Sbjct: 121 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQK 177
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL NVL+ +N V ++DFG+A+ + D T + +MAP
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAP 228
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y AP
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 179
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKS--FDIECDMMKRIRHRNLIKIISSCS 494
G+ GV K R Q +VA+K+ EG+ F E +M + H L+++ C+
Sbjct: 26 GQFGVVKYGKWRGQ--YDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
++ EYM +G L L + Q L + DV A+EYL S +H DL
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 137
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKED 582
N L++D V +SDFG+++ +L ++
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYVLDDE 165
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 446 KARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRI-RHRNLIKIISSCSNDDFKALVL 503
K + ++ + VAVK+ D E E +MMK I +H+N+I ++ +C+ D +++
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 120
Query: 504 EYMPHGSLEKCLYSS-----NYILDI---------FQRL-NIMIDVASALEYLHFGYSVP 548
EY G+L + L + Y DI F+ L + +A +EYL S
Sbjct: 121 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQK 177
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL NVL+ +N V ++DFG+A+ + D T + +MAP
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VYKA+ ++ G A KV + + E + + +E +++ H ++K++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+D +++E+ P G+++ + + L Q I + LE L+F +S IIH DL
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K NVL+ L+DFG++ LK Q + + T +MAP
Sbjct: 136 KAGNVLMTLEGDIRLADFGVSAKNLKTLQK--RDSFIGTPYWMAP 178
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
IG+G +VY A + G EVA++ +LQ + + E +M+ ++ N++ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
D +V+EY+ GSL + + +D Q + + ALE+LH S +IH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K +N+LL + L+DFG + E ++ + T +MAP
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAP 185
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VYKA+ ++ G A KV + + E + + +E +++ H ++K++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+D +++E+ P G+++ + + L Q I + LE L+F +S IIH DL
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 143
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K NVL+ L+DFG++ LK Q + + T +MAP
Sbjct: 144 KAGNVLMTLEGDIRLADFGVSAKNLKTLQK--RDSFIGTPYWMAP 186
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 433 NNLIGRGGVASVYKARIQDG----IEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLI 487
N +IGRG VY + D I AVK + + G F E +MK H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 488 KIISSCSNDDFKALV-LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ C + LV L YM HG L + + + + + + VA +++L S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 149
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT--IGYMA 598
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
IG+G +VY A + G EVA++ +LQ + + E +M+ ++ N++ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
D +V+EY+ GSL + + +D Q + + ALE+LH S +IH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K +N+LL + L+DFG + E ++ + T +MAP
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAP 185
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y AP
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 172
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y AP
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 173
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKS--FDIECDMMKRIRHRNLIKIISSCS 494
G+ GV K R Q +VA+K+ EG+ F E +M + H L+++ C+
Sbjct: 20 GQFGVVKYGKWRGQ--YDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
++ EYM +G L L + Q L + DV A+EYL S +H DL
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKED 582
N L++D V +SDFG+++ +L ++
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDE 159
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y AP
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 172
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 89/164 (54%), Gaps = 19/164 (11%)
Query: 433 NNLIGRGGVASVYKARIQD-GIEVAVKVFD-LQYEGAFKSFDI---ECDMMKRIRHRNLI 487
++++G+G A+V++ R + G A+KVF+ + + + D+ E +++K++ H+N++
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIV 70
Query: 488 KI--ISSCSNDDFKALVLEYMPHGSLEKCLY--SSNYILDIFQRLNIMIDVASALEYLHF 543
K+ I + K L++E+ P GSL L S+ Y L + L ++ DV + +L
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR- 129
Query: 544 GYSVPIIHCDLKPNNVLL----DDNMVAHLSDFGMAKPLLKEDQ 583
I+H ++KP N++ D V L+DFG A+ L ++Q
Sbjct: 130 --ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y AP
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 171
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
IG+G +VY A + G EVA++ +LQ + + E +M+ ++ N++ + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
D +V+EY+ GSL + + +D Q + + ALE+LH S +IH D+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 143
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K +N+LL + L+DFG + E ++ + T +MAP
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAP 186
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKS--FDIECDMMKRIRHRNLIKIISSCS 494
G+ GV K R Q +VA+K+ EG+ F E +M + H L+++ C+
Sbjct: 20 GQFGVVKYGKWRGQ--YDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
++ EYM +G L L + Q L + DV A+EYL S +H DL
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKED 582
N L++D V +SDFG+++ +L ++
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDE 159
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y AP
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 172
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y AP
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 171
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRIRHRNLIKIIS 491
+G+G +VY AR Q+ +A+KV L+ EG E ++ +RH N++++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 492 SCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIH 551
+ L+LE+ P G L K L D + M ++A AL Y H +IH
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH---ERKVIH 137
Query: 552 CDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
D+KP N+L+ ++DFG + SL + T+ Y+ P
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPP 181
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 446 KARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRI-RHRNLIKIISSCSNDDFKALVL 503
K + ++ + VAVK+ D E E +MMK I +H+N+I ++ +C+ D +++
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 120
Query: 504 EYMPHGSLEKCL-----------YSSNYILD---IFQRL-NIMIDVASALEYLHFGYSVP 548
EY G+L + L Y N + + F+ L + +A +EYL S
Sbjct: 121 EYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQK 177
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL NVL+ +N V ++DFG+A+ + D T + +MAP
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAP 228
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 89/164 (54%), Gaps = 19/164 (11%)
Query: 433 NNLIGRGGVASVYKARIQD-GIEVAVKVFD-LQYEGAFKSFDI---ECDMMKRIRHRNLI 487
++++G+G A+V++ R + G A+KVF+ + + + D+ E +++K++ H+N++
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIV 70
Query: 488 KI--ISSCSNDDFKALVLEYMPHGSLEKCLY--SSNYILDIFQRLNIMIDVASALEYLHF 543
K+ I + K L++E+ P GSL L S+ Y L + L ++ DV + +L
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR- 129
Query: 544 GYSVPIIHCDLKPNNVLL----DDNMVAHLSDFGMAKPLLKEDQ 583
I+H ++KP N++ D V L+DFG A+ L ++Q
Sbjct: 130 --ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM GSL L L + Q +++ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 139 DLAAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAP 184
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKS--FDIECDMMKRIRHRNLIKIISSCS 494
G+ GV K R Q +VA+K+ EG+ F E +M + H L+++ C+
Sbjct: 19 GQFGVVKYGKWRGQ--YDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
++ EYM +G L L + Q L + DV A+EYL S +H DL
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 130
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKED 582
N L++D V +SDFG+++ +L ++
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVLDDE 158
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 12/168 (7%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRIRHRNLIKIIS 491
+G+G +VY AR Q +A+KV L+ G E ++ +RH N++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 492 SCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIH 551
+ L+LEY P G++ + L + D + + ++A+AL Y H S +IH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCH---SKRVIH 135
Query: 552 CDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
D+KP N+LL N ++DFG + S +T T+ Y+ P
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 179
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y AP
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 176
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 425 QATNGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKS-FDIECDMMKRIR 482
Q + +G GG V + QD G +VA+K + + + +E +MK++
Sbjct: 12 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 71
Query: 483 HRNLIKI------ISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQR--LNIMIDV 534
H N++ + + +D L +EY G L K L + + ++ D+
Sbjct: 72 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 131
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTL 591
+SAL YLH IIH DLKP N++L ++ + D G AK L DQ T+ +
Sbjct: 132 SSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFV 185
Query: 592 ATIGYMAP 599
T+ Y+AP
Sbjct: 186 GTLQYLAP 193
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 425 QATNGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKS-FDIECDMMKRIR 482
Q + +G GG V + QD G +VA+K + + + +E +MK++
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 70
Query: 483 HRNLIKI------ISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQR--LNIMIDV 534
H N++ + + +D L +EY G L K L + + ++ D+
Sbjct: 71 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 130
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTL 591
+SAL YLH IIH DLKP N++L ++ + D G AK L DQ T+ +
Sbjct: 131 SSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFV 184
Query: 592 ATIGYMAP 599
T+ Y+AP
Sbjct: 185 GTLQYLAP 192
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G+G V+ VA+K + ++F E +MK++RH L+++ + S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-NMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 496 DDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ +V EYM GSL L L + Q +++ +AS + Y+ + +H DL
Sbjct: 252 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 307
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
+ N+L+ +N+V ++DFG+ + L ED T Q I + AP
Sbjct: 308 RAANILVGENLVCKVADFGLGR--LIEDNEYTARQGAKFPIKWTAP 351
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSC 493
+G G VYKA+ G VA+K D + EG + E ++K + H N++ +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
++ LV E+M L+K L + L Q I I + L + + I+H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LKP N+L++ + L+DFG+A+ +S T + T+ Y AP
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAP 188
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSC 493
+G G VYKA+ G VA+K D + EG + E ++K + H N++ +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
++ LV E+M L+K L + L Q I I + L + + I+H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LKP N+L++ + L+DFG+A+ +S T + T+ Y AP
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAP 188
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKS--FDIECDMMKRIRHRNLIKIISSCS 494
G+ GV K R Q +VA+K+ EG+ F E +M + H L+++ C+
Sbjct: 15 GQFGVVKYGKWRGQ--YDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
++ EYM +G L L + Q L + DV A+EYL S +H DL
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 126
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKED 582
N L++D V +SDFG+++ +L ++
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLDDE 154
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ +V EYMP+G+L L N + L + ++SA+EYL IH D
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRD 155
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N V ++DFG+++ L+ D I + AP
Sbjct: 156 LAARNCLVGENHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 200
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + AFK+ +++ +M+++ H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFKNRELQ--IMRKLDHCNIVRL 78
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLT 586
H FG I H D+KP N+LLD D V L DFG AK L++ + +++
Sbjct: 139 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G+G V+ VA+K G ++F E +MK++RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM G L L L + Q +++ +AS + Y+ + +H
Sbjct: 83 SEEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ +N+V ++DFG+A+ L ED T Q I + AP
Sbjct: 139 DLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAP 184
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + AFK+ +++ +M+++ H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFKNRELQ--IMRKLDHCNIVRL 78
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLT 586
H FG I H D+KP N+LLD D V L DFG AK L++ + +++
Sbjct: 139 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
IG+G V + G +VAVK ++ + ++F E +M ++RH NL++++
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 496 DDFK-ALVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ +V EYM GSL L S +L L +DV A+EYL +H D
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 133
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L NVL+ ++ VA +SDFG+ K + S TQ + + AP
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP 174
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
Query: 443 SVYKARIQDGIEVAVKVFDLQYEGAFKS--FDIECDMMKRIRHRNLIKIISSCSND--DF 498
++K R Q G ++ VKV ++ KS F+ EC ++ H N++ ++ +C +
Sbjct: 25 ELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 499 KALVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPN 557
L+ +MP+GSL L+ +N+++D Q + +D+A + +LH + H L
Sbjct: 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNSR 142
Query: 558 NVLLDDNMVAHLS 570
+V++D++M A +S
Sbjct: 143 SVMIDEDMTARIS 155
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N++++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVRL 83
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLT 586
H FG I H D+KP N+LLD D V L DFG AK L++ + +++
Sbjct: 144 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 186
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N++++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVRL 157
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLT 586
H FG I H D+KP N+LLD D V L DFG AK L++ + +++
Sbjct: 218 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 260
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N++++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVRL 112
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLK 580
H FG I H D+KP N+LLD D V L DFG AK L++
Sbjct: 173 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N++++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVRL 114
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLT 586
H FG I H D+KP N+LLD D V L DFG AK L++ + +++
Sbjct: 175 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 217
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N++++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVRL 112
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 173 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 225
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 418 FTHLELFQATNGFSEN---------NLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY 464
FT + QA F++ +IG G V R++ I VA+K Y
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 465 -EGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD 523
+ + F E +M + H N+I + + ++ EYM +GSL+ L ++
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 524 IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQ 583
+ Q + ++ + S ++YL + +H DL N+L++ N+V +SDFGM++ L + +
Sbjct: 130 VIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 186
Query: 584 SLTQTQ 589
+ T+
Sbjct: 187 AAYTTR 192
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 20/181 (11%)
Query: 429 GFSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIK 488
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N+++
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVR 78
Query: 489 I----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEY 540
+ SS D + LVL+Y+P + + + L + M + +L Y
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 541 LH-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
+H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y A
Sbjct: 139 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 191
Query: 599 P 599
P
Sbjct: 192 P 192
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N++++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVRL 116
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLT 586
H FG I H D+KP N+LLD D V L DFG AK L++ + +++
Sbjct: 177 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 219
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G + K L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYC 129
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 180
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
Query: 430 FSENNLIGRGGVASVYKARI--QDG--IEVAVKVF--DLQYEGAFKSFDIECDMMKRIRH 483
F+ ++G+G SV +A++ +DG ++VAVK+ D+ + F E MK H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 484 RNLIKIISSCSNDDFKA------LVLEYMPHGSLEKCLYSSN-----YILDIFQRLNIMI 532
++ K++ K ++L +M HG L L +S + L + + M+
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKED 582
D+A +EYL S IH DL N +L ++M ++DFG+++ + D
Sbjct: 145 DIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 20/181 (11%)
Query: 429 GFSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIK 488
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N+++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVR 77
Query: 489 I----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEY 540
+ SS D + LVL+Y+P + + + L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 541 LH-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
+H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y A
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 190
Query: 599 P 599
P
Sbjct: 191 P 191
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + AFK+ +++ +M+++ H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFKNRELQ--IMRKLDHCNIVRL 78
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 139 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 191
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
IG+G V + G +VAVK ++ + ++F E +M ++RH NL++++
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 496 DDFK-ALVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ +V EYM GSL L S +L L +DV A+EYL +H D
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 142
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L NVL+ ++ VA +SDFG+ K + S TQ + + AP
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP 183
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 20/181 (11%)
Query: 429 GFSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIK 488
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N+++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVR 77
Query: 489 I----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEY 540
+ SS D + LVL+Y+P + + + L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 541 LH-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
+H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y A
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 190
Query: 599 P 599
P
Sbjct: 191 P 191
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N++++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVRL 106
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLK 580
H FG I H D+KP N+LLD D V L DFG AK L++
Sbjct: 167 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 203
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 20/181 (11%)
Query: 429 GFSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIK 488
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N+++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVR 77
Query: 489 I----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEY 540
+ SS D + LVL+Y+P + + + L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 541 LH-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
+H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y A
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRA 190
Query: 599 P 599
P
Sbjct: 191 P 191
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N++++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVRL 86
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 147 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 199
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N++++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVRL 90
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 151 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 203
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N++++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVRL 82
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 143 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 195
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N++++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVRL 90
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 151 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 203
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 20/180 (11%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N++++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVRL 97
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H FG I H D+KP N+LLD D V L DFG AK L++ + +++ + + Y AP
Sbjct: 158 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS---XICSRYYRAP 210
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T+ T+ Y+ P
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTELCGTLDYLPP 175
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 88/168 (52%), Gaps = 17/168 (10%)
Query: 429 GFSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIK 488
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N+++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVR 77
Query: 489 I----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEY 540
+ SS D + LVL+Y+P + + + L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 541 LH-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLT 586
+H FG I H D+KP N+LLD D V L DFG AK L++ + +++
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAV--KV-FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + EV K+ D + EG + E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y AP
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 172
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAV--KV-FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + EV K+ D + EG + E ++K + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y AP
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 171
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
IG+G V + G +VAVK ++ + ++F E +M ++RH NL++++
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 496 DDFK-ALVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ +V EYM GSL L S +L L +DV A+EYL +H D
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 127
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L NVL+ ++ VA +SDFG+ K + S TQ + + AP
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP 168
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVFDLQY--EGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG+G A V AR I G EVA+K+ D + + E +MK + H N++K+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
+ L++EY G + L + + + R + SA++Y H I+H
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHR 135
Query: 553 DLKPNNVLLDDNMVAHLSDFGMA 575
DLK N+LLD +M ++DFG +
Sbjct: 136 DLKAENLLLDADMNIKIADFGFS 158
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+++ +IG G VY+A++ D E+ V + + + FK+ +++ +M+++ H N++++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQDKRFKNRELQ--IMRKLDHCNIVRL 91
Query: 490 ----ISSCSNDD--FKALVLEYMPHG--SLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
SS D + LVL+Y+P + + + L + M + +L Y+
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 542 H-FGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLLKEDQSLT 586
H FG I H D+KP N+LLD D V L DFG AK L++ + +++
Sbjct: 152 HSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 194
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRIRHRNLIKIIS 491
+G+G +VY AR Q +A+KV L+ G E ++ +RH N++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 492 SCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIH 551
+ L+LEY P G++ + L + D + + ++A+AL Y H S +IH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCH---SKRVIH 135
Query: 552 CDLKPNNVLLDDNMVAHLSDFGMA 575
D+KP N+LL N ++DFG +
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWS 159
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 433 NNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMMKRIRHRNLI 487
+IG G V R++ I VA+K Y + + F E +M + H N+I
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ + ++ EYM +GSL+ L ++ + Q + ++ + S ++YL +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DM 129
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+H DL N+L++ N+V +SDFGM++ L + ++ T+
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 420 HLELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECD 476
H+E FQ IG G VYKAR + G VA+K D + EG + E
Sbjct: 2 HMENFQKVEK------IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS 55
Query: 477 MMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVAS 536
++K + H N++K++ ++ LV E++ H L+K + +S L I +
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQ 112
Query: 537 ALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 596
L+ L F +S ++H DLKP N+L++ L+DFG+A+ + T + T+ Y
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWY 170
Query: 597 MAP 599
AP
Sbjct: 171 RAP 173
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
IG+G V + G +VAVK ++ + ++F E +M ++RH NL++++
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 496 DDFK-ALVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ +V EYM GSL L S +L L +DV A+EYL +H D
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 314
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L NVL+ ++ VA +SDFG+ K + S TQ + + AP
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP 355
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 176
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 433 NNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMMKRIRHRNLI 487
+IG G V R++ I VA+K Y + + F E +M + H N+I
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ + ++ EYM +GSL+ L ++ + Q + ++ + S ++YL +
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DM 135
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
+H DL N+L++ N+V +SDFGM++ L + ++ T+
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVFDLQY--EGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG+G A V AR I G EVA+K+ D + + E +MK + H N++K+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
+ L++EY G + L + + + R + SA++Y H I+H
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHR 138
Query: 553 DLKPNNVLLDDNMVAHLSDFGMA 575
DLK N+LLD +M ++DFG +
Sbjct: 139 DLKAENLLLDADMNIKIADFGFS 161
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 175
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ +VAVK Q + +F E ++MK+++H+ L+++ + +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 144
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ D + ++DFG+A+ L+++++ + I + AP
Sbjct: 145 RAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAP 188
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKV-FDLQYE--GAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV F Q E G E ++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G + K L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYC 129
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
H S +IH D+KP N+LL ++DFG +
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 174
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 446 KARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRI-RHRNLIKIISSCSNDDFKALVL 503
K + ++ + VAVK+ D E E +MMK I +H+N+I ++ +C+ D +++
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 120
Query: 504 EYMPHGSLEKCLYSS-----NYILDI---------FQRL-NIMIDVASALEYLHFGYSVP 548
Y G+L + L + Y DI F+ L + +A +EYL S
Sbjct: 121 AYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQK 177
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL NVL+ +N V ++DFG+A+ + D T + +MAP
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 173
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 175
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 174
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 174
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ +VAVK Q + +F E ++MK+++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ D + ++DFG+A+ L+++++ + I + AP
Sbjct: 136 RAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAP 179
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ +VAVK Q + +F E ++MK+++H+ L+++ + +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 143
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ D + ++DFG+A+ L+++++ + I + AP
Sbjct: 144 RAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAP 187
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 171
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 12/176 (6%)
Query: 428 NGFSENNLIGRGGVASVYKARIQDG-IEVAVKVF---DLQYEGAFKSFDIECDMMKRIRH 483
+ F +G+G +VY AR + VA+KV ++ EG E ++ + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
N++++ + + L+LEY P G L K L S D + IM ++A AL Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC-TFDEQRTATIMEELADALMYCH- 140
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+IH D+KP N+LL ++DFG + SL + T+ Y+ P
Sbjct: 141 --GKKVIHRDIKPENLLLGLKGELKIADFGWS----VHAPSLRRKTMCGTLDYLPP 190
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ +VAVK Q + +F E ++MK+++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ D + ++DFG+A+ L+++++ + I + AP
Sbjct: 136 RAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAP 179
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 172
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
IG+G +VY A + G EVA++ +LQ + + E +M+ ++ N++ + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
D +V+EY+ GSL + + +D Q + + ALE+LH S +IH ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRNI 143
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K +N+LL + L+DFG + E ++ + T +MAP
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAP 186
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ +VAVK Q + +F E ++MK+++H+ L+++ + +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 137
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ D + ++DFG+A+ L+++++ + I + AP
Sbjct: 138 RAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAP 181
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 173
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L K ++ + I L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEHV-HQDL-KTFMDASALTGIPLPL-IKSYLFQLLQGLAFCHS 120
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T T + T+ Y AP
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 171
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ +VAVK Q + +F E ++MK+++H+ L+++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 141
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ D + ++DFG+A+ L+++++ + I + AP
Sbjct: 142 RAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAP 185
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ +VAVK Q + +F E ++MK+++H+ L+++ + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 136
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ D + ++DFG+A+ L+++++ + I + AP
Sbjct: 137 RAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAP 180
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 172
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 172
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 171
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 128
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 129 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 179
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTXLCGTLDYLPP 175
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 123
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 124 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 174
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 446 KARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRI-RHRNLIKIISSCSNDDFKALVL 503
K + ++ + VAVK+ D E E +MMK I +H+N+I ++ +C+ D +++
Sbjct: 61 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 120
Query: 504 EYMPHGSLEKCLYSS-----NYILDI---------FQRL-NIMIDVASALEYLHFGYSVP 548
Y G+L + L + Y DI F+ L + +A +EYL S
Sbjct: 121 GYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQK 177
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL NVL+ +N V ++DFG+A+ + D T + +MAP
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+K + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 172
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 17/146 (11%)
Query: 440 GVASVYKARIQD----GIEVAVKVFDLQYEGAFKSFDI------ECDMMKRIRHRNLIKI 489
GV + K +I + G +VAVK+ + Q +S D+ E +K RH ++IK+
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 490 ISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPI 549
S +V+EY+ G L + + ++ R + + SA++Y H +
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---V 132
Query: 550 IHCDLKPNNVLLDDNMVAHLSDFGMA 575
+H DLKP NVLLD +M A ++DFG++
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLS 158
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 175
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVASALEYLHFGYSVP 548
+ +++E+M +G+L L N Q +N ++ ++SA+EYL
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKN 132
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAP 182
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 435 LIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSC 493
++G+G VY R + + + +A+K + + E + K ++H+N+++ + S
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMI-DVASALEYLHFGYSVPIIH 551
S + F + +E +P GSL L S + D Q + + L+YLH I+H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVH 131
Query: 552 CDLKPNNVLLDD-NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
D+K +NVL++ + V +SDFG +K L + T+T T T+ YMAP
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETFT-GTLQYMAP 178
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 14/131 (10%)
Query: 452 GIEVAVKVFDL----QYEGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKAL--VLEY 505
G VAVK Q+ +K E D+++ + H ++IK C + K+L V+EY
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 506 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM 565
+P GSL Y + + + Q L + + YLH S IH +L NVLLD++
Sbjct: 100 VPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDR 154
Query: 566 VAHLSDFGMAK 576
+ + DFG+AK
Sbjct: 155 LVKIGDFGLAK 165
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 452 GIEVAVKVFDL----QYEGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKAL--VLEY 505
G VAVK Q+ +K E D+++ + H ++IK C + +L V+EY
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116
Query: 506 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM 565
+P GSL Y + + + Q L + + YLH + IH DL NVLLD++
Sbjct: 117 VPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDR 171
Query: 566 VAHLSDFGMAK 576
+ + DFG+AK
Sbjct: 172 LVKIGDFGLAK 182
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ +VAVK Q + +F E ++MK+++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ D + ++DFG+A+ L+++++ + I + AP
Sbjct: 136 RAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAP 179
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 84/165 (50%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ +VAVK Q + +F E ++MK+++H+ L+++ + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ D + ++DFG+A+ L+++ + + I + AP
Sbjct: 136 RAANILVSDTLSCKIADFGLAR-LIEDAEXTAREGAKFPIKWTAP 179
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPP 175
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 17/146 (11%)
Query: 440 GVASVYKARIQD----GIEVAVKVFDLQYEGAFKSFDI------ECDMMKRIRHRNLIKI 489
GV + K +I + G +VAVK+ + Q +S D+ E +K RH ++IK+
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 490 ISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPI 549
S +V+EY+ G L + + ++ R + + SA++Y H +
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---V 132
Query: 550 IHCDLKPNNVLLDDNMVAHLSDFGMA 575
+H DLKP NVLLD +M A ++DFG++
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLS 158
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ +VAVK Q + +F E ++MK+++H+ L+++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 141
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ D + ++DFG+A+ L+++++ + I + AP
Sbjct: 142 RAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAP 185
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ +VAVK Q + +F E ++MK+++H+ L+++ + +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 85 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 140
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ D + ++DFG+A+ L+++++ + I + AP
Sbjct: 141 RAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAP 184
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 452 GIEVAVKVFDLQYEG-AFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKA--LVLEYMPH 508
G +VAVK + G E ++++ + H N++K C+ D L++E++P
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 509 GSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAH 568
GSL++ L + +++ Q+L + + ++YL S +H DL NVL++
Sbjct: 110 GSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVK 166
Query: 569 LSDFGMAKPLLKEDQSLT 586
+ DFG+ K + + + T
Sbjct: 167 IGDFGLTKAIETDKEXXT 184
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ +VAVK Q + +F E ++MK+++H+ L+++ + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 130
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ D + ++DFG+A+ L+++++ + I + AP
Sbjct: 131 RAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAP 174
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 452 GIEVAVKVFDLQYEG-AFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKA--LVLEYMPH 508
G +VAVK + G E ++++ + H N++K C+ D L++E++P
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 509 GSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAH 568
GSL++ L + +++ Q+L + + ++YL S +H DL NVL++
Sbjct: 98 GSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVK 154
Query: 569 LSDFGMAKPLLKEDQSLT 586
+ DFG+ K + + + T
Sbjct: 155 IGDFGLTKAIETDKEXXT 172
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ +VAVK Q + +F E ++MK+++H+ L+++ + +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH DL
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 145
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ D + ++DFG+A+ L+++++ + I + AP
Sbjct: 146 RAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAP 189
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 121
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 122 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 172
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 125
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPP 176
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 178
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G SVYKA + G VA+K + E + E +M++ +++K S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIK--QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ +V+EY GS+ + N L + I+ LEYLHF IH D+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDI 151
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K N+LL+ A L+DFG+A L D + + T +MAP
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAP 194
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 150
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 151 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 201
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 12/185 (6%)
Query: 422 ELFQATNGFSENN---LIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDIECDM 477
+L + + EN ++G+G VY R + + + +A+K + + E +
Sbjct: 13 DLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIAL 72
Query: 478 MKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMI-DVA 535
K ++H+N+++ + S S + F + +E +P GSL L S + D Q + +
Sbjct: 73 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL 132
Query: 536 SALEYLHFGYSVPIIHCDLKPNNVLLDD-NMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
L+YLH I+H D+K +NVL++ + V +SDFG +K L + T+T T T+
Sbjct: 133 EGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETFT-GTL 187
Query: 595 GYMAP 599
YMAP
Sbjct: 188 QYMAP 192
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 129
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPP 180
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKV-FDLQYE--GAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV F Q E G E ++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 129
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 180
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 178
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKV-FDLQYE--GAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV F Q E G E ++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 129
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 180
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPP 175
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVASALEYLHFGYSVP 548
+ +++E+M +G+L L N Q +N ++ ++SA+EYL
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 186
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 434 NLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDIECDMMKR------IRHRNL 486
+IG+G V AR + + + AVKV LQ + K + + M +R ++H L
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKV--LQKKAILKKKEEKHIMSERNVLLKNVKHPFL 101
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ + S D VL+Y+ G L L L+ R ++ASAL YLH S
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH---S 157
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ I++ DLKP N+LLD L+DFG+ K ++ + T + T Y+AP
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFCGTPEYLAP 208
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L K ++ + I L I + L+ L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDL-KTFMDASALTGIPLPL-IKSYLFQLLQGLAFCHS 124
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 175
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKV-FDLQYE--GAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV F Q E G E ++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 125
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
H S +IH D+KP N+LL ++DFG +
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 14/131 (10%)
Query: 452 GIEVAVKVFDL----QYEGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKAL--VLEY 505
G VAVK Q+ +K E D+++ + H ++IK C + K+L V+EY
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 506 MPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM 565
+P GSL Y + + + Q L + + YLH + IH +L NVLLD++
Sbjct: 100 VPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDR 154
Query: 566 VAHLSDFGMAK 576
+ + DFG+AK
Sbjct: 155 LVKIGDFGLAK 165
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 85/191 (44%), Gaps = 37/191 (19%)
Query: 434 NLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRI---RHRNLIKII 490
LIGRG +VYK + D VAVKVF F I + R+ H N+ + I
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNF----INEKNIYRVPLMEHDNIARFI 73
Query: 491 SSCSNDDFKA-------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
++ A LV+EY P+GSL K Y S + D + V L YLH
Sbjct: 74 --VGDERVTADGRMEYLLVMEYYPNGSLXK--YLSLHTSDWVSSCRLAHSVTRGLAYLHT 129
Query: 544 ------GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA---------KPLLKEDQSLTQT 588
Y I H DL NVL+ ++ +SDFG++ +P +++ ++++
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE- 188
Query: 589 QTLATIGYMAP 599
+ TI YMAP
Sbjct: 189 --VGTIRYMAP 197
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 433 NNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMMKRIRHRNLI 487
+IG G V ++ I VA+K Y E + F E +M + H N+I
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ + ++ E+M +GSL+ L ++ + Q + ++ +A+ ++YL +
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADM 154
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA---TIGYMAP 599
+H DL N+L++ N+V +SDFG+++ L + T T L I + AP
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 141
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL ++DFG + S +T T+ Y+ P
Sbjct: 142 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPP 192
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
H S +IH D+KP N+LL ++DFG +
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 23/193 (11%)
Query: 430 FSENNL-----IGRGGVASVYKARI-----QDGI-EVAVKVFD-LQYEGAFKSFDIECDM 477
F NNL +G G V +A +D + +VAVK+ + ++ E +
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 478 MKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVAS 536
M + +H N++ ++ +C++ ++ EY +G L L + +L+ I AS
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 537 ALEYLHFGYSVP----------IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLT 586
+ LHF V IH D+ NVLL + VA + DFG+A+ ++ + +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 587 QTQTLATIGYMAP 599
+ + +MAP
Sbjct: 223 KGNARLPVKWMAP 235
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ +++E+M +G+L L N + L + ++SA+EYL IH D
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 135 LAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAP 179
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVASALEYLHFGYSVP 548
+ ++ E+M +G+L L N Q +N ++ ++SA+EYL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAP 186
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 474 ECDMMKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCL---------YSSNYILD 523
E +MMK I +H+N+I ++ +C+ D +++EY G+L + L YS N +
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 183
Query: 524 IFQRLN------IMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 577
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARD 240
Query: 578 LLKEDQSLTQTQTLATIGYMAP 599
+ D T + +MAP
Sbjct: 241 IHHIDYYKKTTNGRLPVKWMAP 262
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
H S +IH D+KP N+LL ++DFG +
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
H S +IH D+KP N+LL ++DFG +
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYI------------ 521
E +++K++ H ++IK+ +CS D L++EY +GSL L S +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 522 -----------LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLS 570
L + ++ ++ ++YL + ++H DL N+L+ + +S
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKIS 192
Query: 571 DFGMAKPLLKEDQSLTQTQTLATIGYMA 598
DFG+++ + +ED + ++Q + +MA
Sbjct: 193 DFGLSRDVYEEDSXVKRSQGRIPVKWMA 220
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYI------------ 521
E +++K++ H ++IK+ +CS D L++EY +GSL L S +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 522 -----------LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLS 570
L + ++ ++ ++YL + ++H DL N+L+ + +S
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKIS 192
Query: 571 DFGMAKPLLKEDQSLTQTQTLATIGYMA 598
DFG+++ + +ED + ++Q + +MA
Sbjct: 193 DFGLSRDVYEEDSXVKRSQGRIPVKWMA 220
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ +++E+M +G+L L N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 181
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
H S +IH D+KP N+LL ++DFG +
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 24/168 (14%)
Query: 425 QATNGFSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHR 484
Q ++ +IG G V++A++ + EVA+K + + FK+ +++ +M+ ++H
Sbjct: 37 QREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIK--KVLQDKRFKNRELQ--IMRIVKHP 92
Query: 485 NLIKIIS------SCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNI------MI 532
N++ + + ++ F LVLEY+P E +S + + Q + + M
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRASRHYAKLKQTMPMLLIKLYMY 148
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPLL 579
+ +L Y+H S+ I H D+KP N+LLD + V L DFG AK L+
Sbjct: 149 QLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
H S +IH D+KP N+LL ++DFG +
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVASALEYLHFGYSVP 548
+ ++ E+M +G+L L N Q +N ++ ++SA+EYL
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKN 131
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 181
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ +++E+M +G+L L N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 181
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVASALEYLHFGYSVP 548
+ ++ E+M +G+L L N Q +N ++ ++SA+EYL
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKN 144
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 194
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 434 NLIGRGGVASVYKAR-IQDGIEVAVKVF--DLQYEGAFK-SFDIECDMMKRIRHRNLIKI 489
++G GG++ V+ AR ++D +VAVKV DL + +F F E + H ++ +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 490 ISSCSNDDFKA----LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+ + +V+EY+ +L +++ + + I + +A A + L+F +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADACQALNFSH 133
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LATIGYMAP 599
IIH D+KP N+++ + DFG+A+ + S+TQT + T Y++P
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVASALEYLHFGYSVP 548
+ ++ E+M +G+L L N Q +N ++ ++SA+EYL
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKN 135
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 185
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 126
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
H S +IH D+KP N+LL ++DFG +
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS 157
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVASALEYLHFGYSVP 548
+ ++ E+M +G+L L N Q +N ++ ++SA+EYL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 186
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 125
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
H S +IH D+KP N+LL ++DFG +
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 426 ATNGFSENNLIGRGGVASVYKARIQDGIEV-AVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR ++ + A+KV L+ G E ++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
H S +IH D+KP N+LL ++DFG +
Sbjct: 125 H---SKKVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 434 NLIGRGGVASVYKAR-IQDGIEVAVKVF--DLQYEGAFK-SFDIECDMMKRIRHRNLIKI 489
++G GG++ V+ AR ++D +VAVKV DL + +F F E + H ++ +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 490 ISSCSNDDFKA----LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+ + +V+EY+ +L +++ + + I + +A A + L+F +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT---PKRAIEV-IADACQALNFSH 133
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LATIGYMAP 599
IIH D+KP N+++ + DFG+A+ + S+TQT + T Y++P
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 21/163 (12%)
Query: 426 ATNGFSENNLIGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDI-ECDMMKRIRH 483
+++ F + +G G A+VYK G+ VA+K L E S I E +MK ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNY----------ILDIFQRLNIMID 533
N++++ ++ LV E+M L+K + S ++ FQ
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQ------- 114
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 576
L+ L F + I+H DLKP N+L++ L DFG+A+
Sbjct: 115 -WQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 150
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
H S +IH D+KP N+LL ++DFG +
Sbjct: 151 H---SKRVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVASALEYLHFGYSVP 548
+ ++ E+M +G+L L N Q +N ++ ++SA+EYL
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKN 131
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 181
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ +VAVK Q + +F E ++MK+++H+ L+++ + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ ++ EYM +GSL L + + I L I + L++ +A + ++ IH +L
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNL 131
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ D + ++DFG+A+ L+++++ + I + AP
Sbjct: 132 RAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAP 175
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 21/177 (11%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISS---- 492
RG V+KA++ + VAVK+F +Q + ++++ + E + ++H N+++ I +
Sbjct: 33 ARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRG 90
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF-------GY 545
S D L+ + GSL L ++ ++ + +I +A L YLH G+
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIG---YMAP 599
I H D+K NVLL +N+ A ++DFG+A LK + + T +G YMAP
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLA---LKFEAGKSAGDTHGQVGTRRYMAP 202
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYI------------ 521
E +++K++ H ++IK+ +CS D L++EY +GSL L S +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 522 -----------LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLS 570
L + ++ ++ ++YL + ++H DL N+L+ + +S
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKIS 192
Query: 571 DFGMAKPLLKEDQSLTQTQTLATIGYMA 598
DFG+++ + +ED + ++Q + +MA
Sbjct: 193 DFGLSRDVYEEDSYVKRSQGRIPVKWMA 220
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVASALEYLHFGYSVP 548
+ ++ E+M +G+L L N Q +N ++ ++SA+EYL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 183
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVASALEYLHFGYSVP 548
+ ++ E+M +G+L L N Q +N ++ ++SA+EYL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 186
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ ++ E+M +G+L L N + L + ++SA+EYL IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 135 LAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAP 179
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVASALEYLHFGYSVP 548
+ ++ E+M +G+L L N Q +N ++ ++SA+EYL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 183
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDI------ECDMMKRIRHRNLIKI 489
+G G V K + G +VAVK+ + Q +S D+ E +K RH ++IK+
Sbjct: 26 VGTFGKVKVGKHELT-GHKVAVKILNRQ---KIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 490 ISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPI 549
S +V+EY+ G L + N LD + + + S ++Y H +
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHM---V 137
Query: 550 IHCDLKPNNVLLDDNMVAHLSDFGMA 575
+H DLKP NVLLD +M A ++DFG++
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLS 163
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 23/179 (12%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGA-FKSFDIECDMMKRIRHRNLIKIISSCS 494
+G+G V++ Q G VAVK+F + E + F+ ++ +M +RH N++ I+S
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIASDM 101
Query: 495 NDDFKA----LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH---FGYS- 546
+ L+ Y GSL L + LD L I++ +AS L +LH FG
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQG 159
Query: 547 -VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-----LATIGYMAP 599
I H DLK N+L+ N ++D G+A + QS Q + T YMAP
Sbjct: 160 KPAIAHRDLKSKNILVKKNGQCCIADLGLA---VMHSQSTNQLDVGNNPRVGTKRYMAP 215
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVFDLQY--EGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG+G A V AR I G EVAVK+ D + + E + K + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
+ LV EY G + L + + R + SA++Y H + I+H
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 553 DLKPNNVLLDDNMVAHLSDFGMA 575
DLK N+LLD + ++DFG +
Sbjct: 138 DLKAENLLLDADXNIKIADFGFS 160
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV L+ G E ++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL +++FG + S +T T+ Y+ P
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDYLPP 178
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ H L+ + +S L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKDFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 172
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 86/167 (51%), Gaps = 10/167 (5%)
Query: 436 IGRGGVASVYK--ARIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G A+VYK +++ D + VA+K L++E GA + E ++K ++H N++ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
+ LV EY+ L++ L I+++ N+ + + L L + + ++H
Sbjct: 69 IHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMH---NVKLFLFQLLRGLAYCHRQKVLHR 124
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
DLKP N+L+++ L+DFG+A+ K + T + T+ Y P
Sbjct: 125 DLKPQNLLINERGELKLADFGLARA--KSIPTKTYDNEVVTLWYRPP 169
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 474 ECDMMKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCL---------YSSNYILD 523
E +MMK I +H+N+I ++ +C+ D +++EY G+L + L YS N +
Sbjct: 75 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 134
Query: 524 IFQRLN------IMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 577
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 135 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 191
Query: 578 LLKEDQSLTQTQTLATIGYMAP 599
+ D T + +MAP
Sbjct: 192 IHHIDYYKKTTNGRLPVKWMAP 213
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 435 LIGRGGVASVYKARIQDGIEV-AVKV---FDLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
+IGRG V R + +V A+K+ F++ F E D+M ++++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVPI 549
+ +D + +V+EYMP G L + SNY + + + R +V AL+ +H S+
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMGF 194
Query: 550 IHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH D+KP+N+LLD + L+DFG + KE T + T Y++P
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISP 243
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ ++ E+M +G+L L N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 181
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVASALEYLHFGYSVP 548
+ ++ E+M +G+L L N Q +N ++ ++SA+EYL
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKN 335
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH +L N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 385
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 474 ECDMMKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCL---------YSSNYILD 523
E +MMK I +H+N+I ++ +C+ D +++EY G+L + L YS N +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 142
Query: 524 IFQRLN------IMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 577
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 578 LLKEDQSLTQTQTLATIGYMAP 599
+ D T + +MAP
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAP 221
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 474 ECDMMKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCL---------YSSNYILD 523
E +MMK I +H+N+I ++ +C+ D +++EY G+L + L YS N +
Sbjct: 72 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 131
Query: 524 IFQRLN------IMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 577
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 132 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 188
Query: 578 LLKEDQSLTQTQTLATIGYMAP 599
+ D T + +MAP
Sbjct: 189 IHHIDYYKKTTNGRLPVKWMAP 210
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
Query: 436 IGRGGVASVYKARIQDGIE-VAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG G +V+KA+ ++ E VA+K D EG S E ++K ++H+N++++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
+D LV E+ L+K S N LD + + + L + H S ++H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAK 576
DLKP N+L++ N L+DFG+A+
Sbjct: 126 DLKPQNLLINRNGELKLADFGLAR 149
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVASALEYLHFGYSVP 548
+ ++ E+M +G+L L N Q +N ++ ++SA+EYL
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKN 132
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAP 182
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ ++ E+M +G+L L N + L + ++SA+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 142 LAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 186
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ ++ E+M +G+L L N ++ L + ++SA+EYL IH +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 382
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 383 LAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 427
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 474 ECDMMKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCL---------YSSNYILD 523
E +MMK I +H+N+I ++ +C+ D +++EY G+L + L YS N +
Sbjct: 76 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 135
Query: 524 IFQRLN------IMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 577
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 136 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 192
Query: 578 LLKEDQSLTQTQTLATIGYMAP 599
+ D T + +MAP
Sbjct: 193 IHHIDYYKKTTNGRLPVKWMAP 214
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKV-FDLQYE--GAFKSFDIECDMMKRI 481
A F +G+G +VY AR Q +A+KV F Q E G E ++ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH N++++ + L+LEY P G++ + L + D + + ++A+AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 126
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +IH D+KP N+LL +++FG + S +T T+ Y+ P
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDYLPP 177
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ ++ E+M +G+L L N + L + ++SA+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 181
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 474 ECDMMKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCL---------YSSNYILD 523
E +MMK I +H+N+I ++ +C+ D +++EY G+L + L YS N +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHN 142
Query: 524 IFQRLN------IMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 577
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 578 LLKEDQSLTQTQTLATIGYMAP 599
+ D T + +MAP
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAP 221
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 435 LIGRGGVASVYKARIQDGIEV-AVKV---FDLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
+IGRG V R + +V A+K+ F++ F E D+M ++++
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVPI 549
+ +D + +V+EYMP G L + SNY + + + R +V AL+ +H S+
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMGF 189
Query: 550 IHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH D+KP+N+LLD + L+DFG + KE T + T Y++P
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISP 238
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVASALEYLHFGYSVP 548
+ ++ E+M +G+L L N Q +N ++ ++SA+EYL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH DL N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAP 183
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 23/179 (12%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGA-FKSFDIECDMMKRIRHRNLIKIISSCS 494
+G+G V++ Q G VAVK+F + E + F+ ++ +M +RH N++ I+S
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIASDM 72
Query: 495 NDDFKA----LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH---FGYS- 546
+ L+ Y GSL L + LD L I++ +AS L +LH FG
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 547 -VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-----LATIGYMAP 599
I H DLK N+L+ N ++D G+A + QS Q + T YMAP
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLA---VMHSQSTNQLDVGNNPRVGTKRYMAP 186
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGA-----FKSFDIECDMMKRIRHR 484
FS+ IG G +VY AR EV V + + Y G ++ E ++++RH
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEV-VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 114
Query: 485 NLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVAS----ALEY 540
N I+ + LV+EY CL S++ +L++ ++ +++A+ AL+
Sbjct: 115 NTIQYRGCYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAVTHGALQG 166
Query: 541 LHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
L + +S +IH D+K N+LL + + L DFG A
Sbjct: 167 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA 201
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 23/179 (12%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGA-FKSFDIECDMMKRIRHRNLIKIISSCS 494
+G+G V++ Q G VAVK+F + E + F+ ++ +M +RH N++ I+S
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIASDM 72
Query: 495 NDDFKA----LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH---FGYS- 546
+ L+ Y GSL L + LD L I++ +AS L +LH FG
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQG 130
Query: 547 -VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-----LATIGYMAP 599
I H DLK N+L+ N ++D G+A + QS Q + T YMAP
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLA---VMHSQSTNQLDVGNNPRVGTKRYMAP 186
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 435 LIGRGGVASVYKARIQDGIEV-AVKV---FDLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
+IGRG V R + +V A+K+ F++ F E D+M ++++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVPI 549
+ +D + +V+EYMP G L + SNY + + + R +V AL+ +H S+
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMGF 194
Query: 550 IHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH D+KP+N+LLD + L+DFG + KE T + T Y++P
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISP 243
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Query: 434 NLIGRGGVASVYKAR-IQDGIEVAVKVF--DLQYEGAFK-SFDIECDMMKRIRHRNLIKI 489
++G GG++ V+ AR ++D +VAVKV DL + +F F E + H ++ +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 490 ISSCSNDDFKA----LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+ + +V+EY+ +L +++ + + I + +A A + L+F +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADACQALNFSH 133
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LATIGYMAP 599
IIH D+KP N+L+ + DFG+A+ + S+ QT + T Y++P
Sbjct: 134 QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSP 188
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ ++ E+M +G+L L N + L + ++SA+EYL IH +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRN 343
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 344 LAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAP 388
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VY+ + + VAVK + + F E +MK I+H NL++++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ ++ E+M +G+L L N + L + ++SA+EYL IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 554 LKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
L N L+ +N + ++DFG+++ L+ D I + AP
Sbjct: 135 LAARNCLVGENHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAP 179
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIISSC 493
+G G V+ +VA+K G +SF E +MK+++H L+++ +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK---PGTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + +V EYM GSL L L + +++ VA+ + Y+ + IH
Sbjct: 74 SEEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHR 129
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
DL+ N+L+ + ++ ++DFG+A+ L ED T Q I + AP
Sbjct: 130 DLRSANILVGNGLICKIADFGLAR--LIEDNEXTARQGAKFPIKWTAP 175
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 30/191 (15%)
Query: 418 FTHLELFQATNGFSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFD----- 472
F H E+ +A IG+G V + D K++ ++Y K +
Sbjct: 14 FDHFEILRA---------IGKGSFGKVCIVQKND----TKKMYAMKYMNKQKCVERNEVR 60
Query: 473 ---IECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLN 529
E +M+ + H L+ + S +++ +V++ + G L L + + + +L
Sbjct: 61 NVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF 120
Query: 530 IMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQ 589
I ++ AL+YL + IIH D+KP+N+LLD++ H++DF +A L +E TQ
Sbjct: 121 I-CELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----TQIT 172
Query: 590 TLA-TIGYMAP 599
T+A T YMAP
Sbjct: 173 TMAGTKPYMAP 183
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVF-DLQYEGAFKSFDI-ECDMMKRIRHRNLIKIISS 492
IG G V+K R +D G VA+K F + + + K + E M+K+++H NL+ ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQR---LNIMIDVA-SALEYLHFGYSVP 548
LV EY H L + LD +QR +++ + L+ ++F +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHE--------LDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IH D+KP N+L+ + V L DFG A+ L S +AT Y +P
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFAR--LLTGPSDYYDDEVATRWYRSP 171
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VYKA+ ++ + A KV D + E + + +E D++ H N++K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
++ +++E+ G+++ + L Q + AL YLH IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDL 161
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LATIGYMAP 599
K N+L + L+DFG++ K +++ + + + T +MAP
Sbjct: 162 KAGNILFTLDGDIKLADFGVSA---KNTRTIQRRDSFIGTPYWMAP 204
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 19/142 (13%)
Query: 474 ECDMMKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCL---------------YS 517
E +MMK I +H+N+I ++ +C+ D +++EY G+L + L ++
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHN 142
Query: 518 SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 577
L ++ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 578 LLKEDQSLTQTQTLATIGYMAP 599
+ D T + +MAP
Sbjct: 200 IHHIDXXKKTTNGRLPVKWMAP 221
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G VYKA+ G A+K L+ E G + E ++K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
LV E++ L+K L L+ + ++ + + + Y H ++H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 554 LKPNNVLLDDNMVAHLSDFGMAK----PLLKEDQSLTQTQTLATIGYMAP 599
LKP N+L++ ++DFG+A+ P+ K T + T+ Y AP
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRK------YTHEIVTLWYRAP 169
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ S++ + L I + L+ L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 175
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VYKA+ ++ + A KV D + E + + +E D++ H N++K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
++ +++E+ G+++ + L Q + AL YLH IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDL 161
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K N+L + L+DFG++ + Q + + T +MAP
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDSFIGTPYWMAP 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ S++ + L I + L+ L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 173
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G VYKA+ G A+K L+ E G + E ++K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
LV E++ L+K L L+ + ++ + + + Y H ++H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 554 LKPNNVLLDDNMVAHLSDFGMAK----PLLKEDQSLTQTQTLATIGYMAP 599
LKP N+L++ ++DFG+A+ P+ K T + T+ Y AP
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRK------YTHEVVTLWYRAP 169
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 23/193 (11%)
Query: 430 FSENNL-----IGRGGVASVYKARI-----QDGI-EVAVKVFD-LQYEGAFKSFDIECDM 477
F NNL +G G V +A +D + +VAVK+ + ++ E +
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 478 MKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVAS 536
M + +H N++ ++ +C++ ++ EY +G L L + +L+ I S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 537 ALEYLHFGYSVP----------IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLT 586
+ LHF V IH D+ NVLL + VA + DFG+A+ ++ + +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 587 QTQTLATIGYMAP 599
+ + +MAP
Sbjct: 223 KGNARLPVKWMAP 235
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGA-----FKSFDIECDMMKRIRHR 484
FS+ IG G +VY AR EV V + + Y G ++ E ++++RH
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEV-VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 75
Query: 485 NLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVAS----ALEY 540
N I+ + LV+EY CL S++ +L++ ++ +++A+ AL+
Sbjct: 76 NTIQYRGCYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAVTHGALQG 127
Query: 541 LHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
L + +S +IH D+K N+LL + + L DFG A
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA 162
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G VYKA+ G A+K L+ E G + E ++K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
LV E++ L+K L L+ + ++ + + + Y H ++H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 554 LKPNNVLLDDNMVAHLSDFGMAK----PLLKEDQSLTQTQTLATIGYMAP 599
LKP N+L++ ++DFG+A+ P+ K T + T+ Y AP
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRK------YTHEVVTLWYRAP 169
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 426 ATNGF---SENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRI 481
A N F S+ ++G G V+K G+++A K+ + + E +M ++
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
H NLI++ + + + LV+EY+ G L + +Y L + M + + ++
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203
Query: 542 HFGYSVPIIHCDLKPNNVLL--DDNMVAHLSDFGMAK 576
H Y I+H DLKP N+L D + DFG+A+
Sbjct: 204 HQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G VYKA+ ++ + A KV D + E + + +E D++ H N++K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
++ +++E+ G+++ + L Q + AL YLH IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDL 161
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K N+L + L+DFG++ + Q + + T +MAP
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQR--RDXFIGTPYWMAP 204
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 452 GIEVAVKVFDLQYEGAFKS-FDIECDMMKRIRHRNLIKIISSCSNDDFKA--LVLEYMPH 508
G VAVK +S + E ++++ + H +++K C + K+ LV+EY+P
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 509 GSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAH 568
GSL Y + + + Q L + + YLH + IH L NVLLD++ +
Sbjct: 98 GSLRD--YLPRHCVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVK 152
Query: 569 LSDFGMAKPL 578
+ DFG+AK +
Sbjct: 153 IGDFGLAKAV 162
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ L+K + +S L I + L+ L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 175
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 452 GIEVAVKVFDLQYEGAFKS-FDIECDMMKRIRHRNLIKIISSCSNDDFKA--LVLEYMPH 508
G VAVK +S + E ++++ + H +++K C + K+ LV+EY+P
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 509 GSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAH 568
GSL Y + + + Q L + + YLH + IH L NVLLD++ +
Sbjct: 97 GSLRD--YLPRHCVGLAQLLLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDRLVK 151
Query: 569 LSDFGMAKPL 578
+ DFG+AK +
Sbjct: 152 IGDFGLAKAV 161
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ S++ + L I + L+ L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 175
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNL 486
F + IG G VYKAR + G VA+K D + EG + E ++K + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K++ ++ LV E++ S++ + L I + L+ L F +S
Sbjct: 67 VKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
++H DLKP N+L++ L+DFG+A+ + T + T+ Y AP
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 174
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 24/198 (12%)
Query: 417 RFTHLELFQAT----NGFSENNLIGRGGVASVYKARIQDGIEV--------AVKVFDLQY 464
RF + +A + F + ++GRGG V+ +++ ++ Y
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 465 EGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDI 524
+GA +E ++ ++ R ++ + + LV+ M G + +Y+ +
Sbjct: 230 QGAM----VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG 285
Query: 525 FQRLNIMI---DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKE 581
FQ + + S LE+LH II+ DLKP NVLLDD+ +SD G+A LK
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVE-LKA 341
Query: 582 DQSLTQTQTLATIGYMAP 599
Q+ T+ T G+MAP
Sbjct: 342 GQTKTKGYA-GTPGFMAP 358
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 433 NNLIGRGGVASVYKARIQ----DGIEVAVKVFDLQY-EGAFKSFDIECDMMKRIRHRNLI 487
+IG G V ++ I VA+K Y E + F E +M + H N+I
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ + ++ E+M +GSL+ L ++ + Q + ++ +A+ ++YL +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DM 128
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA---TIGYMAP 599
+H L N+L++ N+V +SDFG+++ L + T T L I + AP
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 24/198 (12%)
Query: 417 RFTHLELFQAT----NGFSENNLIGRGGVASVYKARIQDGIEV--------AVKVFDLQY 464
RF + +A + F + ++GRGG V+ +++ ++ Y
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 465 EGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDI 524
+GA +E ++ ++ R ++ + + LV+ M G + +Y+ +
Sbjct: 230 QGAM----VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG 285
Query: 525 FQRLNIMI---DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKE 581
FQ + + S LE+LH II+ DLKP NVLLDD+ +SD G+A LK
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVE-LKA 341
Query: 582 DQSLTQTQTLATIGYMAP 599
Q+ T+ T G+MAP
Sbjct: 342 GQTKTKGYA-GTPGFMAP 358
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 24/198 (12%)
Query: 417 RFTHLELFQAT----NGFSENNLIGRGGVASVYKARIQDGIEV--------AVKVFDLQY 464
RF + +A + F + ++GRGG V+ +++ ++ Y
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 465 EGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDI 524
+GA +E ++ ++ R ++ + + LV+ M G + +Y+ +
Sbjct: 230 QGAM----VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG 285
Query: 525 FQRLNIMI---DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKE 581
FQ + + S LE+LH II+ DLKP NVLLDD+ +SD G+A LK
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVE-LKA 341
Query: 582 DQSLTQTQTLATIGYMAP 599
Q+ T+ T G+MAP
Sbjct: 342 GQTKTKGYA-GTPGFMAP 358
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
Query: 436 IGRGGVASVYKARIQDGIE-VAVKV--FDLQYEGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG G +V+KA+ ++ E VA+K D EG S E ++K ++H+N++++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
+D LV E+ L+K S N LD + + + L + H S ++H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 553 DLKPNNVLLDDNMVAHLSDFGMAK 576
DLKP N+L++ N L++FG+A+
Sbjct: 126 DLKPQNLLINRNGELKLANFGLAR 149
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 88/187 (47%), Gaps = 17/187 (9%)
Query: 423 LFQATNGFSEN----NLIGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGA--FKSFDIEC 475
+ A+ FS+N +G+G + V + G+E A K+ + + A F+ + E
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79
Query: 476 DMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVA 535
+ ++++H N++++ S + F LV + + G L + + + + + + +
Sbjct: 80 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQ 135
Query: 536 SALEYLHFGYSVPIIHCDLKPNNVLLDDN---MVAHLSDFGMAKPLLKEDQSLTQTQTLA 592
LE + + +S I+H +LKP N+LL L+DFG+A ++ + S
Sbjct: 136 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAG 192
Query: 593 TIGYMAP 599
T GY++P
Sbjct: 193 TPGYLSP 199
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 90/214 (42%), Gaps = 27/214 (12%)
Query: 408 NMPLVANLRRFTHLELFQATNGFSENNLIGRGGVASVYKARI------QDGIEVAVKVFD 461
MPL+ ++ E+ + F E +G VYK + + VA+K
Sbjct: 8 EMPLINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK 65
Query: 462 LQYEGAFKS-FDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNY 520
+ EG + F E + R++H N++ ++ + D +++ Y HG L + L +
Sbjct: 66 DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSP 125
Query: 521 ILDIFQR---------------LNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM 565
D+ ++++ +A+ +EYL S ++H DL NVL+ D +
Sbjct: 126 HSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL 182
Query: 566 VAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+SD G+ + + D +L I +MAP
Sbjct: 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 216
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 474 ECDMMKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCL---------YSSNYILD 523
E +MMK I +H+N+I ++ +C+ D +++EY G+L + L Y N +
Sbjct: 68 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 127
Query: 524 IFQRLN------IMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 577
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 128 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 184
Query: 578 LLKEDQSLTQTQTLATIGYMAP 599
+ D T + +MAP
Sbjct: 185 IHHIDYYKKTTNGRLPVKWMAP 206
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 474 ECDMMKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCL---------YSSNYILD 523
E +MMK I +H+N+I ++ +C+ D +++EY G+L + L Y N +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 142
Query: 524 IFQRLN------IMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 577
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 578 LLKEDQSLTQTQTLATIGYMAP 599
+ D T + +MAP
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAP 221
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 24/198 (12%)
Query: 417 RFTHLELFQAT----NGFSENNLIGRGGVASVYKARIQDGIEV--------AVKVFDLQY 464
RF + +A + F + ++GRGG V+ +++ ++ Y
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 465 EGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDI 524
+GA +E ++ ++ R ++ + + LV+ M G + +Y+ +
Sbjct: 230 QGAM----VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG 285
Query: 525 FQRLNIMI---DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKE 581
FQ + + S LE+LH II+ DLKP NVLLDD+ +SD G+A LK
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVE-LKA 341
Query: 582 DQSLTQTQTLATIGYMAP 599
Q+ T+ T G+MAP
Sbjct: 342 GQTKTKGYA-GTPGFMAP 358
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 78/194 (40%), Gaps = 33/194 (17%)
Query: 436 IGRGGVASVYKARI------QDGIEVAVKVFDLQYEGAFKS-FDIECDMMKRIRHRNLIK 488
IG G V++AR + VAVK+ + ++ F E +M + N++K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNY-----------------------ILDIF 525
++ C+ L+ EYM +G L + L S + L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 526 QRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSL 585
++L I VA+ + YL +H DL N L+ +NMV ++DFG+++ + D
Sbjct: 175 EQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 586 TQTQTLATIGYMAP 599
I +M P
Sbjct: 232 ADGNDAIPIRWMPP 245
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISS---C 493
RG V+KA++ + VAVK+F LQ + +++S + E ++H NL++ I++
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRG 81
Query: 494 SNDDFK-ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF--------G 544
SN + + L+ + GSL Y I+ + ++ ++ L YLH G
Sbjct: 82 SNLEVELWLITAFHDKGSLTD--YLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 545 YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ I H D K NVLL ++ A L+DFG+A + T YMAP
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 434 NLIGRGGVASVYKARIQDGIEV-AVKV---FDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+IGRG V R + +V A+K+ F++ F E D+M ++++
Sbjct: 81 KVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 140
Query: 490 ISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPI 549
+ +D + +V+EYMP G L + SNY + +V AL+ +H S+ +
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVVLALDAIH---SMGL 195
Query: 550 IHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LATIGYMAP 599
IH D+KP+N+LLD + L+DFG + ++ + T + T Y++P
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFGTCMKM--DETGMVHCDTAVGTPDYISP 244
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 20/177 (11%)
Query: 436 IGRGGVASVYKARIQ-DGIEVAVK----VFDLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
IG G V AR + G +VA+K FD+ K E ++K +H N+I I
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNA--KRTLRELKILKHFKHDNIIAIK 119
Query: 491 S----SCSNDDFKAL--VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG 544
+ +FK++ VL+ M L + ++SS L + + + L+Y+H
Sbjct: 120 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH-- 175
Query: 545 YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKE--DQSLTQTQTLATIGYMAP 599
S +IH DLKP+N+L+++N + DFGMA+ L + T+ +AT Y AP
Sbjct: 176 -SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 231
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 82/165 (49%), Gaps = 6/165 (3%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ + +VAVK + ++F E ++MK ++H L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL-NIMIDVASALEYLHFGYSVPIIHCDL 554
++ ++ EYM GSL L S + +L + +A + Y+ IH DL
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 136
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ NVL+ ++++ ++DFG+A+ ++++++ + I + AP
Sbjct: 137 RAANVLVSESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAP 180
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 434 NLIGRGGVASVYKAR-IQDGIEVAVKVF--DLQYEGAFK-SFDIECDMMKRIRHRNLIKI 489
++G GG++ V+ AR ++ +VAVKV DL + +F F E + H ++ +
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 490 ISSCSNDD----FKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
++ + +V+EY+ +L +++ + + I + +A A + L+F +
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADACQALNFSH 133
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LATIGYMAP 599
IIH D+KP N+++ + DFG+A+ + S+TQT + T Y++P
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 30/281 (10%)
Query: 43 LRNLKRLSLNYNYLTSSTP---------------KLNFLSSLSNCKYLKYLSFSNNSLDG 87
L NL+ L+LN N +T +P K+ +S+L N L+ L + +++
Sbjct: 65 LTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISD 124
Query: 88 ILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLTNLTTIYLGGNKLNGSIPIAXXXXXX 147
I P A NL++ + N N+S P +SN T L + + +K+ PIA
Sbjct: 125 ISPLA--NLTKXYSLNLGANHNLSDLSP--LSNXTGLNYLTVTESKVKDVTPIANLTDLY 180
Query: 148 XXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKLSGFVPACFGNLTSLRNLYLGSNQLT 207
NQ+E P N+++ P N T L +L +G+N++T
Sbjct: 181 SLSLNY--NQIEDISPLASLTSLHYFTAYV--NQITDITPVA--NXTRLNSLKIGNNKIT 234
Query: 208 SIPSTLWNLKYILYLNLSSNSFTGPLPLEIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDL 267
+ S L NL + +L + +N + + +L L +++ N S + + +L L
Sbjct: 235 DL-SPLANLSQLTWLEIGTNQISDINA--VKDLTKLKXLNVGSNQISDI--SVLNNLSQL 289
Query: 268 QYLFLEYNRLQGSIPDSIGGLIDLKSLDLSNNNISGAIPIS 308
LFL N+L + IGGL +L +L LS N+I+ P++
Sbjct: 290 NSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRPLA 330
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 16 IFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSSTPKLNFLSSLSNCKYL 75
+ N ++L+ L++ N P L NL +L+ +L T +++ ++++ + L
Sbjct: 217 VANXTRLNSLKIGNNKITDLSP-----LANLSQLT----WLEIGTNQISDINAVKDLTKL 267
Query: 76 KYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLTNLTTIYLGGNKLN 135
K L+ +N + I + NLSQ + F+ N + E I LTNLTT++L N +
Sbjct: 268 KXLNVGSNQISDI--SVLNNLSQ-LNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHIT 324
Query: 136 GSIPIA 141
P+A
Sbjct: 325 DIRPLA 330
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 26/200 (13%)
Query: 404 LADANMPLVANLRRFTHLELFQATNGFSENNLIGRGGVASVYKA--------RIQDGIEV 455
LA+ L+ + R TH + +IG+G VY RIQ I+
Sbjct: 8 LAEVKDVLIPHERVVTH-----------SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKS 56
Query: 456 AVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIIS-SCSNDDFKALVLEYMPHGSLEKC 514
++ ++Q AF E +M+ + H N++ +I + ++L YM HG L +
Sbjct: 57 LSRITEMQQVEAFLR---EGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQF 113
Query: 515 LYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGM 574
+ S + ++ + VA +EYL +H DL N +LD++ ++DFG+
Sbjct: 114 IRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGL 170
Query: 575 AKPLLKEDQSLTQTQTLATI 594
A+ +L + Q A +
Sbjct: 171 ARDILDREYYSVQQHRHARL 190
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 43/202 (21%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIK 488
F E LIG GG V+KA+ + DG ++ E A + E + ++ H N++
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIVH 69
Query: 489 IISSC----------SNDDFKA--------------------LVLEYMPHGSLEKCLYSS 518
+ C S+D ++ + +E+ G+LE+ +
Sbjct: 70 Y-NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 519 N-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 577
LD L + + ++Y+H S +IH DLKP+N+ L D + DFG+
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 578 LLKEDQSLTQTQTLATIGYMAP 599
L + + +T++ T+ YM+P
Sbjct: 186 LKNDGK---RTRSKGTLRYMSP 204
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 102/233 (43%), Gaps = 25/233 (10%)
Query: 389 VILLILRYRKRGKSQLADANMPLVANLRRFTHLELFQ------ATNGFSENNLIGRGGVA 442
VI+L + +RKR S+L + + N F+ +++ A + + +G+G
Sbjct: 2 VIMLYVFHRKRNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFG 61
Query: 443 SVY----KARIQDGIEVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIKIISSCSN 495
VY K ++D E V + + + + F E +MK ++++++ S
Sbjct: 62 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 121
Query: 496 DDFKALVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALEYLHFGYS 546
+++E M G L+ L S +N +L + + + + ++A + YL+ +
Sbjct: 122 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---A 178
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+H DL N ++ ++ + DFGM + + + D + L + +M+P
Sbjct: 179 NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 20/177 (11%)
Query: 436 IGRGGVASVYKARIQ-DGIEVAVK----VFDLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
IG G V AR + G +VA+K FD+ K E ++K +H N+I I
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNA--KRTLRELKILKHFKHDNIIAIK 120
Query: 491 S----SCSNDDFKAL--VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG 544
+ +FK++ VL+ M L + ++SS L + + + L+Y+H
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH-- 176
Query: 545 YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKE--DQSLTQTQTLATIGYMAP 599
S +IH DLKP+N+L+++N + DFGMA+ L + T+ +AT Y AP
Sbjct: 177 -SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 232
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 28/188 (14%)
Query: 430 FSENNLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIK 488
F E LIG GG V+KA+ + DG +K E A + E + ++ H N++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 489 IISSCSNDDFKA----------------LVLEYMPHGSLEKCLYSSN-YILDIFQRLNIM 531
D+ + +E+ G+LE+ + LD L +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 532 IDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTL 591
+ ++Y+H S +I+ DLKP+N+ L D + DFG+ L + + + ++
Sbjct: 129 EQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RXRSK 182
Query: 592 ATIGYMAP 599
T+ YM+P
Sbjct: 183 GTLRYMSP 190
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
F + +GRG + VY+ + Q G + + L+ K E ++ R+ H N+IK+
Sbjct: 55 FEVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKL 113
Query: 490 ISSCSNDDFKALVLEYMPHGSL-----EKCLYSSNYILDIFQRLNIMIDVASALEYLHFG 544
+LVLE + G L EK YS D ++ + A+ YLH
Sbjct: 114 KEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ------ILEAVAYLH-- 165
Query: 545 YSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
I+H DLKP N+L + ++DFG++K + E Q L +T T GY AP
Sbjct: 166 -ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK--IVEHQVLMKT-VCGTPGYCAP 219
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 15/172 (8%)
Query: 435 LIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMM-KRI-----RHRNLI 487
++G+G V AR+++ G AVKV L+ + + D+EC M KRI H L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRILSLARNHPFLT 87
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
++ D V+E++ G L + S + R ++ SAL +LH
Sbjct: 88 QLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMFLH---DK 143
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
II+ DLK +NVLLD L+DFGM K + +T T Y+AP
Sbjct: 144 GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC--NGVTTATFCGTPDYIAP 193
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 434 NLIGRGGVASVYKARIQDG--------IEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRN 485
++G+GG V++ R G ++V K ++ E ++++ ++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
++ +I + L+LEY+ G L L ++ + +++ AL +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH--- 138
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
II+ DLKP N++L+ L+DFG+ K + D ++T T TI YMAP
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI-HDGTVTHT-FCGTIEYMAP 190
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 430 FSENNLIGRGGVASVYKARIQDG--IEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLI 487
++ N IGRG V K +Q G I A K + F E ++MK + H N+I
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 488 KIISSCSNDDFKALVLEYMPHGSL-EKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ + ++ LV+E G L E+ ++ + R IM DV SA+ Y H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCH---K 141
Query: 547 VPIIHCDLKPNNVL-LDDNMVAHLS--DFGMA 575
+ + H DLKP N L L D+ + L DFG+A
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 173
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Query: 434 NLIGRGGVASVYKAR-IQDGIEVAVKVF--DLQYEGAFK-SFDIECDMMKRIRHRNLIKI 489
++G GG++ V+ AR ++ +VAVKV DL + +F F E + H ++ +
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 490 ISSCSNDD----FKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+ + +V+EY+ +L +++ + + I + +A A + L+F +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADACQALNFSH 133
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LATIGYMAP 599
IIH D+KP N+++ + DFG+A+ + S+TQT + T Y++P
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
IG G V A G +VAVK DL+ + + E +M+ H N++ + SS
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
D +V+E++ G+L + + ++ Q + + V AL YLH + +IH D+
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYLH---NQGVIHRDI 167
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K +++LL + LSDFG + KE + + T +MAP
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKXLVGTPYWMAP 210
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 19/168 (11%)
Query: 439 GGVASVYKARIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS---- 491
G V S Y AR++ +VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 42 GSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTP 98
Query: 492 SCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIH 551
+ S +DF + L G+ + S + D + ++ + L+Y+H S IIH
Sbjct: 99 ATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIH---SAGIIH 154
Query: 552 CDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
DLKP+NV ++++ + DFG+A+ + D+ + T +AT Y AP
Sbjct: 155 RDLKPSNVAVNEDSELRILDFGLAR---QADEEM--TGYVATRWYRAP 197
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 10/170 (5%)
Query: 434 NLIGR-GGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIIS 491
+IG G VYKA+ ++ + A KV D + E + + +E D++ H N++K++
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 492 SCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIH 551
+ ++ +++E+ G+++ + L Q + AL YLH IIH
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIH 131
Query: 552 CDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT--LATIGYMAP 599
DLK N+L + L+DFG++ K ++ Q + + T +MAP
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSA---KNTRTXIQRRDSFIGTPYWMAP 178
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 427 TNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRH-- 483
+ F E ++G+G V KAR D A+K E + E ++ + H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQY 63
Query: 484 -----------RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI 532
RN +K +++ + +EY +G+L ++S N + +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 576
+ AL Y+H S IIH DLKP N+ +D++ + DFG+AK
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ A +VAVK + ++F E ++MK ++H L+K+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL-EYLHFGYSVPIIHCDL 554
+ ++ E+M GSL L S Q L +ID ++ + E + F IH DL
Sbjct: 82 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ ++V ++DFG+A+ ++++++ + I + AP
Sbjct: 138 RAANILVSASLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAP 181
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 89/182 (48%), Gaps = 13/182 (7%)
Query: 427 TNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVF--DLQYEGAFK-SFDIECDMMKRIR 482
++ + ++G GG++ V+ AR ++ +VAVKV DL + +F F E +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 483 HRNLIKIISSCSNDD----FKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
H ++ + + + +V+EY+ +L +++ + + I + +A A
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADAC 143
Query: 539 EYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LATIGYM 597
+ L+F + IIH D+KP N+++ + DFG+A+ + S+TQT + T Y+
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 203
Query: 598 AP 599
+P
Sbjct: 204 SP 205
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 82/165 (49%), Gaps = 6/165 (3%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ + +VAVK + ++F E ++MK ++H L+++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL-NIMIDVASALEYLHFGYSVPIIHCDL 554
++ ++ E+M GSL L S + +L + +A + Y+ IH DL
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 135
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ NVL+ ++++ ++DFG+A+ ++++++ + I + AP
Sbjct: 136 RAANVLVSESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAP 179
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 430 FSENNLIGRGGVASVYKARIQDG--IEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLI 487
++ N IGRG V K +Q G I A K + F E ++MK + H N+I
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 488 KIISSCSNDDFKALVLEYMPHGSL-EKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
++ + ++ LV+E G L E+ ++ + R IM DV SA+ Y H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCH---K 124
Query: 547 VPIIHCDLKPNNVL-LDDNMVAHLS--DFGMA 575
+ + H DLKP N L L D+ + L DFG+A
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 443 SVYKARIQDGIEVAVKVFDLQYEGAFKS--FDIECDMMKRIRHRNLIKIISSCSND--DF 498
++K R Q G ++ VKV ++ KS F+ EC ++ H N++ ++ +C +
Sbjct: 25 ELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 499 KALVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPN 557
L+ + P+GSL L+ +N+++D Q + +D A +LH + H L
Sbjct: 84 PTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHA-LNSR 142
Query: 558 NVLLDDNMVAHLS 570
+V +D++ A +S
Sbjct: 143 SVXIDEDXTARIS 155
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 31/174 (17%)
Query: 439 GGVASVYKARIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS---- 491
G V S Y AR++ +VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 42 GSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTP 98
Query: 492 SCSNDDFKALVLEYMPHGS----LEKCLYSSNYILD--IFQRLNIMIDVASALEYLHFGY 545
+ S +DF + L G+ + KC S+ + ++Q L L+Y+H
Sbjct: 99 ATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR-------GLKYIH--- 148
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S IIH DLKP+NV ++++ + DFG+A+ + D+ + T +AT Y AP
Sbjct: 149 SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEM--TGYVATRWYRAP 197
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 7/165 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ A +VAVK + ++F E ++MK ++H L+K+ + +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL-EYLHFGYSVPIIHCDL 554
+ ++ E+M GSL L S Q L +ID ++ + E + F IH DL
Sbjct: 255 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ N+L+ ++V ++DFG+A+ ++++++ + I + AP
Sbjct: 311 RAANILVSASLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAP 354
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 434 NLIGRGGVASVYKARI--QDG--IEVAVKVFDLQ--YEGAFKSFDIECDMMKRIRHRNLI 487
++G G SV + + +DG ++VAVK L + + F E MK H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 488 KIISSCSNDDFKAL-----VLEYMPHGSLEKCLYSSNY-----ILDIFQRLNIMIDVASA 537
+++ C + + +L +M +G L L S + + L M+D+A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKED 582
+EYL + +H DL N +L D+M ++DFG++K + D
Sbjct: 160 MEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 31/194 (15%)
Query: 419 THLELFQATNGFSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEG---AFKSFDIEC 475
T E+ Q G G V S Y AR++ +VAVK ++ A +++ E
Sbjct: 14 TVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR-EL 70
Query: 476 DMMKRIRHRNLIKIIS----SCSNDDFKALVLEYMPHGS----LEKCLYSSNYILD--IF 525
++K ++H N+I ++ + S +DF + L G+ + KC S+ + ++
Sbjct: 71 RLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVY 130
Query: 526 QRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSL 585
Q L L+Y+H S IIH DLKP+NV ++++ + DFG+A+ + D+ +
Sbjct: 131 QLLR-------GLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEM 177
Query: 586 TQTQTLATIGYMAP 599
T +AT Y AP
Sbjct: 178 --TGYVATRWYRAP 189
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 132/313 (42%), Gaps = 39/313 (12%)
Query: 1 LLLWGNNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSST 60
+L+ N + P + N + L+ L L N P NL NL RL L+ N ++
Sbjct: 90 ILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-- 143
Query: 61 PKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEIS- 119
+S+LS L+ LSFS+N + + P A + + +IS + +IS
Sbjct: 144 -----ISALSGLTSLQQLSFSSNQVTDLKPLA--------NLTTLERLDISSNKVSDISV 190
Query: 120 --NLTNLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLE--GSIPXXXXXXXXXXXX 175
LTNL ++ N+++ P+ NQL+ G++
Sbjct: 191 LAKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKDIGTL----ASLTNLTDL 244
Query: 176 XXGGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPL 235
N++S P LT L L LG+NQ+++I S L L + L L+ N P
Sbjct: 245 DLANNQISNLAP--LSGLTKLTELKLGANQISNI-SPLAGLTALTNLELNENQLEDISP- 300
Query: 236 EIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLD 295
I NL+ L + L NN S P + L LQ LF N++ S S+ L ++ L
Sbjct: 301 -ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKV--SDVSSLANLTNINWLS 355
Query: 296 LSNNNISGAIPIS 308
+N IS P++
Sbjct: 356 AGHNQISDLTPLA 368
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 104/256 (40%), Gaps = 46/256 (17%)
Query: 66 LSSLSNCKYLKYLS---FSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLT 122
+ S+ +YL L+ FSNN L I P + NLT
Sbjct: 53 IKSIDGVEYLNNLTQINFSNNQLTDITP---------------------------LKNLT 85
Query: 123 NLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKL 182
L I + N++ P+A +NQ+ P N +
Sbjct: 86 KLVDILMNNNQIADITPLANLTNLTGLTLF--NNQITDIDP--LKNLTNLNRLELSSNTI 141
Query: 183 SGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPL-EIGNLR 241
S + LTSL+ L SNQ+T + L NL + L++SSN + L ++ NL
Sbjct: 142 SDI--SALSGLTSLQQLSFSSNQVTDLKP-LANLTTLERLDISSNKVSDISVLAKLTNLE 198
Query: 242 VLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLSNNNI 301
L+ + N S P +G L +L L L N+L+ ++ L +L LDL+NN I
Sbjct: 199 SLIATN---NQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQI 251
Query: 302 SGAIPIS-LEKLLDLK 316
S P+S L KL +LK
Sbjct: 252 SNLAPLSGLTKLTELK 267
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 25/186 (13%)
Query: 436 IGRGGVASVYKARI------QDGIEVAVKVFDLQYEGAFKS-FDIECDMMKRIRHRNLIK 488
+G VYK + + VA+K + EG + F E + R++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQR---------------LNIMID 533
++ + D +++ Y HG L + L + D+ ++++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
+A+ +EYL S ++H DL NVL+ D + +SD G+ + + D +L
Sbjct: 137 IAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 594 IGYMAP 599
I +MAP
Sbjct: 194 IRWMAP 199
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 430 FSENNLIGRGGVASVYKA---RIQDGIEVAVKVFDLQYEGAFKSF-DIECDMMKRIRHRN 485
F++ IG+G V+K R Q VA+K+ DL+ E ++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKV--VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+ K S D +++EY+ GS L LD Q I+ ++ L+YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 141
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S IH D+K NVLL ++ L+DFG+A L D + + + T +MAP
Sbjct: 142 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAP 193
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 8/128 (6%)
Query: 473 IECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNI-M 531
+E D++ + H ++K+ + + L+L+++ G L L S ++ + + +
Sbjct: 75 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL 132
Query: 532 IDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTL 591
++A AL++LH S+ II+ DLKP N+LLD+ L+DFG++K + D
Sbjct: 133 AELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFC 187
Query: 592 ATIGYMAP 599
T+ YMAP
Sbjct: 188 GTVEYMAP 195
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 434 NLIGRGGVASVYKA-RIQDG--IEVAVKVFDLQYEGAFKSFDIECDMMKRI---RHRNLI 487
++G G +V+K I +G I++ V + ++ + +SF D M I H +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+++ C + LV +Y+P GSL + L LN + +A + YL
Sbjct: 79 RLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EH 134
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
++H +L NVLL ++DFG+A L +D+ L ++ I +MA
Sbjct: 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 17/195 (8%)
Query: 410 PLVANLRRFTHLELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQ 463
P A LR EL + ++G G +VYK + +G I VA+K+ +
Sbjct: 27 PNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 79
Query: 464 YEGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD 523
A F E +M + H +L++++ C + + LV + MPHG L + ++ +
Sbjct: 80 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIG 138
Query: 524 IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQ 583
LN + +A + YL ++H DL NVL+ ++DFG+A+ L +++
Sbjct: 139 SQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 195
Query: 584 SLTQTQTLATIGYMA 598
I +MA
Sbjct: 196 EYNADGGKMPIKWMA 210
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 8/128 (6%)
Query: 473 IECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNI-M 531
+E D++ + H ++K+ + + L+L+++ G L L S ++ + + +
Sbjct: 75 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL 132
Query: 532 IDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTL 591
++A AL++LH S+ II+ DLKP N+LLD+ L+DFG++K + D
Sbjct: 133 AELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFC 187
Query: 592 ATIGYMAP 599
T+ YMAP
Sbjct: 188 GTVEYMAP 195
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 8/128 (6%)
Query: 473 IECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNI-M 531
+E D++ + H ++K+ + + L+L+++ G L L S ++ + + +
Sbjct: 76 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL 133
Query: 532 IDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTL 591
++A AL++LH S+ II+ DLKP N+LLD+ L+DFG++K + D
Sbjct: 134 AELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFC 188
Query: 592 ATIGYMAP 599
T+ YMAP
Sbjct: 189 GTVEYMAP 196
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 430 FSENNLIGRGGVASVYKA---RIQDGIEVAVKVFDLQYEGAFKSF-DIECDMMKRIRHRN 485
F++ IG+G V+K R Q VA+K+ DL+ E ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKV--VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+ K S D +++EY+ GS L LD Q I+ ++ L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 121
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S IH D+K NVLL ++ L+DFG+A L D + + + T +MAP
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAP 173
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 434 NLIGRGGVASVYKA-RIQDG--IEVAVKVFDLQYEGAFKSFDIECDMMKRI---RHRNLI 487
++G G +V+K I +G I++ V + ++ + +SF D M I H +++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+++ C + LV +Y+P GSL + L LN + +A + YL
Sbjct: 97 RLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EH 152
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
++H +L NVLL ++DFG+A L +D+ L ++ I +MA
Sbjct: 153 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 430 FSENNLIGRGGVASVYKA---RIQDGIEVAVKVFDLQYEGAFKSF-DIECDMMKRIRHRN 485
F++ IG+G V+K R Q VA+K+ DL+ E ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKV--VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+ K S D +++EY+ GS L LD Q I+ ++ L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 121
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S IH D+K NVLL ++ L+DFG+A L D + + + T +MAP
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAP 173
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 430 FSENNLIGRGGVASVYKA---RIQDGIEVAVKVFDLQYEGAFKSF-DIECDMMKRIRHRN 485
F++ IG+G V+K R Q VA+K+ DL+ E ++ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQ--VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+ K S +++EY+ GS L + + D FQ ++ ++ L+YLH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILKGLDYLH--- 137
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S IH D+K NVLL + L+DFG+A L D + + + T +MAP
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAP 189
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQDGIEVAVKVFDLQYEGA--FKSFDIECDMMK 479
F E +L +G+G SV R + D V V LQ+ G + F E ++K
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 480 RIRHRNLIKI--ISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
+ ++K +S LV+EY+P G L L LD + L +
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 123
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLATIGY 596
+EYL S +H DL N+L++ ++DFG+AK L L +D + + + I +
Sbjct: 124 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 597 MAP 599
AP
Sbjct: 181 YAP 183
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 430 FSENNLIGRGGVASVYKA---RIQDGIEVAVKVFDLQYEGAFKSF-DIECDMMKRIRHRN 485
F++ IG+G V+K R Q VA+K+ DL+ E ++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKV--VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+ K S D +++EY+ GS L LD Q I+ ++ L+YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 136
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S IH D+K NVLL ++ L+DFG+A L D + + + T +MAP
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAP 188
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 427 TNGFSENNLIGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGA--FKSFDIECDMMKRIRH 483
++ + +G+G + V + G+E A K+ + + A F+ + E + ++++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
N++++ S + F LV + + G L + + + + + + + LE + +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAY 120
Query: 544 GYSVPIIHCDLKPNNVLLDDN---MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+S I+H +LKP N+LL L+DFG+A ++ + S T GY++P
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSP 176
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKAL--VLEYMPHGSLEKCLYSSNYILDIFQRLNIM 531
E +++R+RH+N+I+++ N++ + + V+EY G E + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 532 IDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK---PLLKEDQSLTQT 588
+ LEYLH S I+H D+KP N+LL +S G+A+ P +D T
Sbjct: 116 CQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 589 QTLA 592
+ A
Sbjct: 173 GSPA 176
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 15/195 (7%)
Query: 410 PLVANLRRFTHLELFQATNGFSENNLIGRGGVASVYKARI-QDGIEVAVKV---FDLQYE 465
P+V L+ E+ + F +IGRG + V ++ Q G A+K+ +D+
Sbjct: 48 PIVVRLK-----EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR 102
Query: 466 GAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIF 525
G F E D++ R + ++ + ++++ LV+EY G L L +
Sbjct: 103 GEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAE 162
Query: 526 QRLNIMIDVASALEYLH-FGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQS 584
+ ++ A++ +H GY +H D+KP+N+LLD L+DFG L+ D +
Sbjct: 163 MARFYLAEIVMAIDSVHRLGY----VHRDIKPDNILLDRCGHIRLADFGSCLK-LRADGT 217
Query: 585 LTQTQTLATIGYMAP 599
+ + T Y++P
Sbjct: 218 VRSLVAVGTPDYLSP 232
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNL 486
N FS + +IGRGG VY R D G A+K D K ++ + R +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK------KRIKMKQGETLALNERIM 241
Query: 487 IKIISS-------CSNDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+ ++S+ C + F + +L+ M G L L + R ++
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEI 300
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
LE++H + +++ DLKP N+LLD++ +SD G+A K+ ++ T
Sbjct: 301 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTH 353
Query: 595 GYMAP 599
GYMAP
Sbjct: 354 GYMAP 358
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 132/313 (42%), Gaps = 39/313 (12%)
Query: 1 LLLWGNNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSST 60
+L+ N + P + N + L+ L L N P NL NL RL L+ N ++
Sbjct: 90 ILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-- 143
Query: 61 PKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEIS- 119
+S+LS L+ LSFS+N + + P A + + +IS + +IS
Sbjct: 144 -----ISALSGLTSLQQLSFSSNQVTDLKPLA--------NLTTLERLDISSNKVSDISV 190
Query: 120 --NLTNLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLE--GSIPXXXXXXXXXXXX 175
LTNL ++ N+++ P+ NQL+ G++
Sbjct: 191 LAKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKDIGTL----ASLTNLTDL 244
Query: 176 XXGGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPL 235
N++S P LT L L LG+NQ+++I S L L + L L+ N P
Sbjct: 245 DLANNQISNLAP--LSGLTKLTELKLGANQISNI-SPLAGLTALTNLELNENQLEDISP- 300
Query: 236 EIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLD 295
I NL+ L + L NN S P + L LQ LF N++ S S+ L ++ L
Sbjct: 301 -ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKV--SDVSSLANLTNINWLS 355
Query: 296 LSNNNISGAIPIS 308
+N IS P++
Sbjct: 356 AGHNQISDLTPLA 368
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 104/256 (40%), Gaps = 46/256 (17%)
Query: 66 LSSLSNCKYLKYLS---FSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLT 122
+ S+ +YL L+ FSNN L I P + NLT
Sbjct: 53 IKSIDGVEYLNNLTQINFSNNQLTDITP---------------------------LKNLT 85
Query: 123 NLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKL 182
L I + N++ P+A +NQ+ P N +
Sbjct: 86 KLVDILMNNNQIADITPLANLTNLTGLTLF--NNQITDIDP--LKNLTNLNRLELSSNTI 141
Query: 183 SGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPL-EIGNLR 241
S + LTSL+ L SNQ+T + L NL + L++SSN + L ++ NL
Sbjct: 142 SDI--SALSGLTSLQQLSFSSNQVTDLKP-LANLTTLERLDISSNKVSDISVLAKLTNLE 198
Query: 242 VLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLSNNNI 301
L+ + N S P +G L +L L L N+L+ ++ L +L LDL+NN I
Sbjct: 199 SLIATN---NQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQI 251
Query: 302 SGAIPIS-LEKLLDLK 316
S P+S L KL +LK
Sbjct: 252 SNLAPLSGLTKLTELK 267
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNL 486
N FS + +IGRGG VY R D G A+K D K ++ + R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK------KRIKMKQGETLALNERIM 242
Query: 487 IKIISS-------CSNDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+ ++S+ C + F + +L+ M G L L + R ++
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEI 301
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
LE++H + +++ DLKP N+LLD++ +SD G+A K+ ++ T
Sbjct: 302 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTH 354
Query: 595 GYMAP 599
GYMAP
Sbjct: 355 GYMAP 359
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 409 MPLVANLRRFTHLELFQATNGFSENNLIGRGGVASVYKARIQDGIE-VAVK-VFDLQYEG 466
MP R+ E + F +++G G + V A + + VA+K + EG
Sbjct: 1 MPGAVEGPRWKQAEDIRDIYDF--RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG 58
Query: 467 AFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSL-----EKCLYSSNYI 521
S + E ++ +I+H N++ + + L+++ + G L EK Y+
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER-- 116
Query: 522 LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVL---LDDNMVAHLSDFGMAKPL 578
++ V A++YLH + I+H DLKP N+L LD++ +SDFG++K
Sbjct: 117 ----DASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-- 167
Query: 579 LKEDQSLTQTQTLATIGYMAP 599
ED + T GY+AP
Sbjct: 168 -MEDPGSVLSTACGTPGYVAP 187
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQDGIEVAVKVFDLQYEG--AFKSFDIECDMMK 479
F E +L +G+G SV R + D V V LQ+ G + F E ++K
Sbjct: 7 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 66
Query: 480 RIRHRNLIKI--ISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
+ ++K +S LV+EY+P G L L LD + L +
Sbjct: 67 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 126
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLATIGY 596
+EYL S +H DL N+L++ ++DFG+AK L L +D + + + I +
Sbjct: 127 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 183
Query: 597 MAP 599
AP
Sbjct: 184 YAP 186
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 17/195 (8%)
Query: 410 PLVANLRRFTHLELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQ 463
P A LR EL + ++G G +VYK + +G I VA+K+ +
Sbjct: 4 PNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 56
Query: 464 YEGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD 523
A F E +M + H +L++++ C + + LV + MPHG L + ++ +
Sbjct: 57 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIG 115
Query: 524 IFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQ 583
LN + +A + YL ++H DL NVL+ ++DFG+A+ L +++
Sbjct: 116 SQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 172
Query: 584 SLTQTQTLATIGYMA 598
I +MA
Sbjct: 173 EYNADGGKMPIKWMA 187
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQDGIEVAVKVFDLQYEGA--FKSFDIECDMMK 479
F E +L +G+G SV R + D V V LQ+ G + F E ++K
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 480 RIRHRNLIKI--ISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
+ ++K +S LV+EY+P G L L LD + L +
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 127
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLATIGY 596
+EYL S +H DL N+L++ ++DFG+AK L L +D + + + I +
Sbjct: 128 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 597 MAP 599
AP
Sbjct: 185 YAP 187
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
Query: 434 NLIGRGGVASVYKARIQDG--------IEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRN 485
++G+GG V++ R G ++V K ++ E ++++ ++H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
++ +I + L+LEY+ G L L ++ + +++ AL +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH--- 138
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
II+ DLKP N++L+ L+DFG+ K + D ++T TI YMAP
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI-HDGTVTHX-FCGTIEYMAP 190
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 430 FSENNL-----IGRGGVASVYKAR---IQDGIEVAVKVFDLQYEG--AFKSFDIECDMMK 479
F E +L +G+G SV R + D V V LQ+ G + F E ++K
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 79
Query: 480 RIRHRNLIKI--ISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
+ ++K +S LV+EY+P G L L LD + L +
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 139
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLATIGY 596
+EYL S +H DL N+L++ ++DFG+AK L L +D + + + I +
Sbjct: 140 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 196
Query: 597 MAP 599
AP
Sbjct: 197 YAP 199
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNL 486
N FS + +IGRGG VY R D G A+K D K ++ + R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK------KRIKMKQGETLALNERIM 242
Query: 487 IKIISS-------CSNDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+ ++S+ C + F + +L+ M G L L + R ++
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEI 301
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
LE++H + +++ DLKP N+LLD++ +SD G+A K+ ++ T
Sbjct: 302 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTH 354
Query: 595 GYMAP 599
GYMAP
Sbjct: 355 GYMAP 359
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNL 486
N FS + +IGRGG VY R D G A+K D K ++ + R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK------KRIKMKQGETLALNERIM 242
Query: 487 IKIISS-------CSNDDFK-----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+ ++S+ C + F + +L+ M G L L + R ++
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEI 301
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
LE++H + +++ DLKP N+LLD++ +SD G+A K+ ++ T
Sbjct: 302 ILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTH 354
Query: 595 GYMAP 599
GYMAP
Sbjct: 355 GYMAP 359
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 433 NNLIGRGGVASVYKA-RIQDG-------IEVAVKVFDLQYEGAFKSFDIECDMMKRIRHR 484
N +G+G ++K R + G EV +KV D + +SF MM ++ H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 485 NLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG 544
+L+ C D LV E++ GSL+ L + ++I +L + +A+A +HF
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA---MHFL 129
Query: 545 YSVPIIHCDLKPNNVLL---DDNMVAH-----LSDFGMAKPLLKED 582
+IH ++ N+LL +D + LSD G++ +L +D
Sbjct: 130 EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 427 TNGFSENNLIGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGA--FKSFDIECDMMKRIRH 483
++ + +G+G + V + G+E A K+ + + A F+ + E + ++++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
N++++ S + F LV + + G L + + + + + + + LE + +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAY 120
Query: 544 GYSVPIIHCDLKPNNVLLDDN---MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+S I+H +LKP N+LL L+DFG+A ++ + S T GY++P
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSP 176
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN 495
+G G V+ A +VAVK + ++F E ++MK ++H L+K+ + +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL-EYLHFGYSVPIIHCDL 554
+ ++ E+M GSL L S Q L +ID ++ + E + F IH DL
Sbjct: 249 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 555 KPNNVLLDDNMVAHLSDFGMAK 576
+ N+L+ ++V ++DFG+A+
Sbjct: 305 RAANILVSASLVCKIADFGLAR 326
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 427 TNGFSENNLIGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGA--FKSFDIECDMMKRIRH 483
++ + +G+G + V + G+E A K+ + + A F+ + E + ++++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
N++++ S + F LV + + G L + + + + + + + LE + +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAY 119
Query: 544 GYSVPIIHCDLKPNNVLLDDN---MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+S I+H +LKP N+LL L+DFG+A ++ + S T GY++P
Sbjct: 120 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSP 175
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 436 IGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDIECD---MMKRIRHRNLIKIIS 491
+G G V+ R + +G A+KV + K + D M+ + H +I++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 492 SCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIH 551
+ + ++++Y+ G L L S + + +V ALEYLH S II+
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH---SKDIIY 129
Query: 552 CDLKPNNVLLDDNMVAHLSDFGMAK 576
DLKP N+LLD N ++DFG AK
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAK 154
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 119/256 (46%), Gaps = 47/256 (18%)
Query: 66 LSSLSNCKYLKYLS---FSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLT 122
+ S+ +YL L+ FSNN L I P + NL++ +++ M N I+ P ++NLT
Sbjct: 53 IKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDIL-MNNNQIADITP--LANLT 107
Query: 123 NLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKL 182
NLT + L N++ P+ N+LE S N +
Sbjct: 108 NLTGLTLFNNQITDIDPLKNLTNL---------NRLELS-----------------SNTI 141
Query: 183 SGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPL-EIGNLR 241
S + LTSL+ L G NQ+T + L NL + L++SSN + L ++ NL
Sbjct: 142 SDI--SALSGLTSLQQLNFG-NQVTDLKP-LANLTTLERLDISSNKVSDISVLAKLTNLE 197
Query: 242 VLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLSNNNI 301
L+ + N S P +G L +L L L N+L+ ++ L +L LDL+NN I
Sbjct: 198 SLIATN---NQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQI 250
Query: 302 SGAIPIS-LEKLLDLK 316
S P+S L KL +LK
Sbjct: 251 SNLAPLSGLTKLTELK 266
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 131/313 (41%), Gaps = 40/313 (12%)
Query: 1 LLLWGNNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSST 60
+L+ N + P + N + L+ L L N P NL NL RL L+ N ++
Sbjct: 90 ILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-- 143
Query: 61 PKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEIS- 119
+S+LS L+ L+F N D + + NL+ + +IS + +IS
Sbjct: 144 -----ISALSGLTSLQQLNFGNQVTD---LKPLANLTT------LERLDISSNKVSDISV 189
Query: 120 --NLTNLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLE--GSIPXXXXXXXXXXXX 175
LTNL ++ N+++ P+ NQL+ G++
Sbjct: 190 LAKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKDIGTL----ASLTNLTDL 243
Query: 176 XXGGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPL 235
N++S P LT L L LG+NQ+++I S L L + L L+ N P
Sbjct: 244 DLANNQISNLAP--LSGLTKLTELKLGANQISNI-SPLAGLTALTNLELNENQLEDISP- 299
Query: 236 EIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLD 295
I NL+ L + L NN S P + L LQ LF N++ S S+ L ++ L
Sbjct: 300 -ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKV--SDVSSLANLTNINWLS 354
Query: 296 LSNNNISGAIPIS 308
+N IS P++
Sbjct: 355 AGHNQISDLTPLA 367
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 104/247 (42%), Gaps = 29/247 (11%)
Query: 4 WGNNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSSTPKL 63
+GN + P + N + L RL++ N + L NL+ L N ++ TP
Sbjct: 158 FGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-- 211
Query: 64 NFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQ--SMEVFFMFNCNISGSIPEEISNL 121
L L+N L SL+G + IG L+ ++ + N IS P +S L
Sbjct: 212 --LGILTNLDEL--------SLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGL 259
Query: 122 TNLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNK 181
T LT + LG N+++ P+A +NQLE P N
Sbjct: 260 TKLTELKLGANQISNISPLA--GLTALTNLELNENQLEDISPISNLKNLTYLTLYF--NN 315
Query: 182 LSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPLEIGNLR 241
+S P +LT L+ L+ +N+++ + S+L NL I +L+ N + PL NL
Sbjct: 316 ISDISPVS--SLTKLQRLFFSNNKVSDV-SSLANLTNINWLSAGHNQISDLTPL--ANLT 370
Query: 242 VLVQIDL 248
+ Q+ L
Sbjct: 371 RITQLGL 377
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 119/256 (46%), Gaps = 47/256 (18%)
Query: 66 LSSLSNCKYLKYLS---FSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLT 122
+ S+ +YL L+ FSNN L I P + NL++ +++ M N I+ P ++NLT
Sbjct: 53 IKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDIL-MNNNQIADITP--LANLT 107
Query: 123 NLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKL 182
NLT + L N++ P+ N+LE S N +
Sbjct: 108 NLTGLTLFNNQITDIDPLKNLTNL---------NRLELS-----------------SNTI 141
Query: 183 SGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPL-EIGNLR 241
S + LTSL+ L G NQ+T + L NL + L++SSN + L ++ NL
Sbjct: 142 SDI--SALSGLTSLQQLNFG-NQVTDLKP-LANLTTLERLDISSNKVSDISVLAKLTNLE 197
Query: 242 VLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLSNNNI 301
L+ + N S P +G L +L L L N+L+ ++ L +L LDL+NN I
Sbjct: 198 SLIATN---NQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQI 250
Query: 302 SGAIPIS-LEKLLDLK 316
S P+S L KL +LK
Sbjct: 251 SNLAPLSGLTKLTELK 266
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 131/313 (41%), Gaps = 40/313 (12%)
Query: 1 LLLWGNNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSST 60
+L+ N + P + N + L+ L L N P NL NL RL L+ N ++
Sbjct: 90 ILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-- 143
Query: 61 PKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEIS- 119
+S+LS L+ L+F N D + + NL+ + +IS + +IS
Sbjct: 144 -----ISALSGLTSLQQLNFGNQVTD---LKPLANLTT------LERLDISSNKVSDISV 189
Query: 120 --NLTNLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLE--GSIPXXXXXXXXXXXX 175
LTNL ++ N+++ P+ NQL+ G++
Sbjct: 190 LAKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKDIGTL----ASLTNLTDL 243
Query: 176 XXGGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPL 235
N++S P LT L L LG+NQ+++I S L L + L L+ N P
Sbjct: 244 DLANNQISNLAP--LSGLTKLTELKLGANQISNI-SPLAGLTALTNLELNENQLEDISP- 299
Query: 236 EIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLD 295
I NL+ L + L NN S P + L LQ LF N++ S S+ L ++ L
Sbjct: 300 -ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKV--SDVSSLANLTNINWLS 354
Query: 296 LSNNNISGAIPIS 308
+N IS P++
Sbjct: 355 AGHNQISDLTPLA 367
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 104/247 (42%), Gaps = 29/247 (11%)
Query: 4 WGNNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSSTPKL 63
+GN + P + N + L RL++ N + L NL+ L N ++ TP
Sbjct: 158 FGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-- 211
Query: 64 NFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQ--SMEVFFMFNCNISGSIPEEISNL 121
L L+N L SL+G + IG L+ ++ + N IS P +S L
Sbjct: 212 --LGILTNLDEL--------SLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGL 259
Query: 122 TNLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNK 181
T LT + LG N+++ P+A +NQLE P N
Sbjct: 260 TKLTELKLGANQISNISPLA--GLTALTNLELNENQLEDISPISNLKNLTYLTLYF--NN 315
Query: 182 LSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPLEIGNLR 241
+S P +LT L+ L+ +N+++ + S+L NL I +L+ N + PL NL
Sbjct: 316 ISDISPVS--SLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQISDLTPL--ANLT 370
Query: 242 VLVQIDL 248
+ Q+ L
Sbjct: 371 RITQLGL 377
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 462 LQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS--NDDFKALVLEYMPHGSLEKCLYSSN 519
+Q G + E ++K++ H N++K++ N+D +V E + G + +
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 133
Query: 520 YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLL 579
D Q D+ +EYLH+ IIH D+KP+N+L+ ++ ++DFG++
Sbjct: 134 LSED--QARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 580 KEDQSLTQTQTLATIGYMAP 599
D L + T+ T +MAP
Sbjct: 189 GSDALL--SNTVGTPAFMAP 206
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 473 IECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNI-M 531
+E D++ + H ++K+ + + L+L+++ G L L S ++ + + +
Sbjct: 79 MERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL 136
Query: 532 IDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTL 591
++A L++LH S+ II+ DLKP N+LLD+ L+DFG++K + D
Sbjct: 137 AELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--DHEKKAYSFC 191
Query: 592 ATIGYMAP 599
T+ YMAP
Sbjct: 192 GTVEYMAP 199
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 27/171 (15%)
Query: 453 IEVAVKVFDLQYEGAFK-SFDIECDMMKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGS 510
I+VAVK+ + + + + + E MM ++ H N++ ++ +C+ L+ EY +G
Sbjct: 76 IQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 135
Query: 511 L-------------EKCLYSSNYILDIFQRLNIMI---------DVASALEYLHFGYSVP 548
L ++ Y + L+ + LN++ VA +E+L F
Sbjct: 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---S 192
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+H DL NVL+ V + DFG+A+ ++ + + + + +MAP
Sbjct: 193 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP 243
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGA--FKSFDIECDMMKRIRHRNLIKIISS 492
+G+G + V + +I G E A K+ + + A + + E + + ++H N++++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + F LV + + G L + + + Y + + + LE ++ + I+H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILESVNHCHLNGIVHR 127
Query: 553 DLKPNNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
DLKP N+LL L+DFG+A + + Q+ T GY++P
Sbjct: 128 DLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW--FGFAGTPGYLSP 175
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 434 NLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRI-RHRNLIKIIS 491
L+G G VYK R ++ G A+KV D+ + + E +M+K+ HRN+
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIATYYG 88
Query: 492 SCSN------DDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFG 544
+ DD LV+E+ GS+ + ++ L I ++ L +LH
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH-- 146
Query: 545 YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT-LATIGYMAP 599
+IH D+K NVLL +N L DFG++ L D+++ + T + T +MAP
Sbjct: 147 -QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGTPYWMAP 198
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
IG G V A ++ G VAVK DL+ + + E +M+ +H N++++ +S
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
D +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 196
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K +++LL + LSDFG + KE + + T +MAP
Sbjct: 197 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 239
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRI-RHRNLIK 488
F +++G G ++ + D +VAVK F D E +++ H N+I+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRI---LPECFSFADREVQLLRESDEHPNVIR 82
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ + F+ + +E +L++ + ++ + + ++ S L +LH S+
Sbjct: 83 YFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLN 138
Query: 549 IIHCDLKPNNVLLD-----DNMVAHLSDFGMAKPLLKEDQSLTQTQTL-ATIGYMAP 599
I+H DLKP+N+L+ + A +SDFG+ K L S ++ + T G++AP
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
IG G V A ++ G VAVK DL+ + + E +M+ +H N++++ +S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
D +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 142
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K +++LL + LSDFG + KE + + T +MAP
Sbjct: 143 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 185
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 22/179 (12%)
Query: 436 IGRGGVASVYKARIQ-DGIEVAVKVFDL--QYEGAFKSFDIECDMMKRIRHRNLIK---- 488
IG G K R + DG + K D E + E ++++ ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 489 IISSCSNDDFKALVLEYMPHGSLE----KCLYSSNYILDIFQRLNIMIDVASALEYLHF- 543
II + + +V+EY G L K Y+ + F L +M + AL+ H
Sbjct: 74 IIDRTNTTLY--IVMEYCEGGDLASVITKGTKERQYLDEEFV-LRVMTQLTLALKECHRR 130
Query: 544 ---GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
G++V +H DLKP NV LD L DFG+A+ +L D S +T + T YM+P
Sbjct: 131 SDGGHTV--LHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKT-FVGTPYYMSP 185
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
IG G V A ++ G VAVK DL+ + + E +M+ +H N++++ +S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
D +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 146
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K +++LL + LSDFG + KE + + T +MAP
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 189
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
IG G V A ++ G VAVK DL+ + + E +M+ +H N++++ +S
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
D +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 153
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K +++LL + LSDFG + KE + + T +MAP
Sbjct: 154 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 196
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGA--FKSFDIECDMMKRIRHRNLIKIISS 492
+G+G + V + +I G E A K+ + + A + + E + + ++H N++++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + F LV + + G L + + + Y + + + LE ++ + I+H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILESVNHCHLNGIVHR 127
Query: 553 DLKPNNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
DLKP N+LL L+DFG+A + + Q+ T GY++P
Sbjct: 128 DLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSP 175
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGA--FKSFDIECDMMKRIRHRNLIKIISS 492
IG+G + V + ++ G E A K+ + + A + + E + + ++H N++++ S
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + F LV + + G L + + + Y + + + LE + + + ++H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLHCHQMGVVHR 127
Query: 553 DLKPNNVLLDDN---MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
DLKP N+LL L+DFG+A + + Q+ T GY++P
Sbjct: 128 DLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAW--FGFAGTPGYLSP 175
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
IG G V A ++ G VAVK DL+ + + E +M+ +H N++++ +S
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
D +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 151
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K +++LL + LSDFG + KE + + T +MAP
Sbjct: 152 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 194
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F IG G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EYMP G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F IG G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EYMP G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 427 TNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRH-- 483
+ F E ++G+G V KAR D A+K E + E ++ + H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQY 63
Query: 484 -----------RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI 532
RN +K +++ + +EY + +L ++S N + +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 576
+ AL Y+H S IIH DLKP N+ +D++ + DFG+AK
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 22/177 (12%)
Query: 433 NNLIGRGGVASVYKARIQDGIE-VAVKVFDLQY-EGAFKSFDIECDMMKRIRHRNLIKII 490
+++G G + V A + + VA+K + EG S + E ++ +I+H N++ +
Sbjct: 23 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 491 SSCSNDDFKALVLEYMPHGSL-----EKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+ L+++ + G L EK Y+ ++ V A++YLH
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKYLH--- 133
Query: 546 SVPIIHCDLKPNNVL---LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ I+H DLKP N+L LD++ +SDFG++K ED + T GY+AP
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACGTPGYVAP 187
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 132/313 (42%), Gaps = 39/313 (12%)
Query: 1 LLLWGNNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSST 60
+L+ N + P + N + L+ L L N P NL NL RL L+ N ++
Sbjct: 90 ILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-- 143
Query: 61 PKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEIS- 119
+S+LS L+ L+FS+N + + P A + + +IS + +IS
Sbjct: 144 -----ISALSGLTSLQQLNFSSNQVTDLKPLA--------NLTTLERLDISSNKVSDISV 190
Query: 120 --NLTNLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLE--GSIPXXXXXXXXXXXX 175
LTNL ++ N+++ P+ NQL+ G++
Sbjct: 191 LAKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKDIGTL----ASLTNLTDL 244
Query: 176 XXGGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPL 235
N++S P LT L L LG+NQ+++I S L L + L L+ N P
Sbjct: 245 DLANNQISNLAP--LSGLTKLTELKLGANQISNI-SPLAGLTALTNLELNENQLEDISP- 300
Query: 236 EIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLD 295
I NL+ L + L NN S P + L LQ LF N++ S S+ L ++ L
Sbjct: 301 -ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKV--SDVSSLANLTNINWLS 355
Query: 296 LSNNNISGAIPIS 308
+N IS P++
Sbjct: 356 AGHNQISDLTPLA 368
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 102/275 (37%), Gaps = 84/275 (30%)
Query: 66 LSSLSNCKYLKYLS---FSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLT 122
+ S+ +YL L+ FSNN L I P + NLT
Sbjct: 53 IKSIDGVEYLNNLTQINFSNNQLTDITP---------------------------LKNLT 85
Query: 123 NLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKL 182
L I + N++ P+A L G N++
Sbjct: 86 KLVDILMNNNQIADITPLANLT------------NLTG--------------LTLFNNQI 119
Query: 183 SGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPLEIGNLRV 242
+ P NLT+L L L SN ++ I S L L + LN SSN T PL NL
Sbjct: 120 TDIDP--LKNLTNLNRLELSSNTISDI-SALSGLTSLQQLNFSSNQVTDLKPL--ANLTT 174
Query: 243 LVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIP-------------------- 282
L ++D+S N S + + L +L+ L N++ P
Sbjct: 175 LERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 232
Query: 283 DSIGGLIDLKSLDLSNNNISGAIPIS-LEKLLDLK 316
++ L +L LDL+NN IS P+S L KL +LK
Sbjct: 233 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 267
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 22/177 (12%)
Query: 433 NNLIGRGGVASVYKARIQDGIE-VAVKVFDLQY-EGAFKSFDIECDMMKRIRHRNLIKII 490
+++G G + V A + + VA+K + EG S + E ++ +I+H N++ +
Sbjct: 23 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 491 SSCSNDDFKALVLEYMPHGSL-----EKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+ L+++ + G L EK Y+ ++ V A++YLH
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKYLH--- 133
Query: 546 SVPIIHCDLKPNNVL---LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ I+H DLKP N+L LD++ +SDFG++K ED + T GY+AP
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACGTPGYVAP 187
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 420 HLELFQATNGFSENNLIGRGGVASVYKARIQDG--IEVAVKVFDLQYEGAFKSFDIECDM 477
H Q T+G+ IG G SV K I +E AVK+ D + +I +
Sbjct: 14 HRNSIQFTDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI---L 69
Query: 478 MKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++ +H N+I + + + +V E M G L + + + + ++ +
Sbjct: 70 LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE-REASAVLFTITKT 128
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDN----MVAHLSDFGMAKPLLKED 582
+EYLH + ++H DLKP+N+L D + DFG AK L E+
Sbjct: 129 VEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 433 NNLIGRGGVASVYKA-RIQDG-------IEVAVKVFDLQYEGAFKSFDIECDMMKRIRHR 484
N +G+G ++K R + G EV +KV D + +SF MM ++ H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 485 NLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG 544
+L+ C D LV E++ GSL+ L + ++I +L + +A A +HF
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWA---MHFL 129
Query: 545 YSVPIIHCDLKPNNVLL---DDNMVAH-----LSDFGMAKPLLKED 582
+IH ++ N+LL +D + LSD G++ +L +D
Sbjct: 130 EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 22/177 (12%)
Query: 433 NNLIGRGGVASVYKARIQDGIE-VAVKVFDLQY-EGAFKSFDIECDMMKRIRHRNLIKII 490
+++G G + V A + + VA+K + EG S + E ++ +I+H N++ +
Sbjct: 23 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 491 SSCSNDDFKALVLEYMPHGSL-----EKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
+ L+++ + G L EK Y+ ++ V A++YLH
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKYLH--- 133
Query: 546 SVPIIHCDLKPNNVL---LDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ I+H DLKP N+L LD++ +SDFG++K ED + T GY+AP
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTACGTPGYVAP 187
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 436 IGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
IG G V AR + G +VAVK+ DL+ + + E +M+ +H N++++ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+ +++E++ G+L + S L+ Q + V AL YLH + +IH D+
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDI 167
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K +++LL + LSDFG + K+ + + T +MAP
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKXLVGTPYWMAP 210
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILL 80
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 81 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 135
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEY 191
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 192 VATRWYRAP 200
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
IG G V A ++ G VAVK DL+ + + E +M+ +H N++++ +S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
D +V+E++ G+L + + ++ Q + + V AL LH + +IH D+
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 273
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
K +++LL + LSDFG + KE + + T +MAP
Sbjct: 274 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAP 316
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 96
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M L L ++ Y L Q L+ +
Sbjct: 97 RFRHENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLY 151
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEY 207
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 208 VATRWYRAP 216
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 453 IEVAVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHG 509
+ VAVK L A F E + M + HRNLI++ K +V E P G
Sbjct: 47 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLG 105
Query: 510 SLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVA 567
SL L + +++L R + VA + YL S IH DL N+LL +
Sbjct: 106 SLLDRLRKHQGHFLLGTLSRYAVQ--VAEGMGYLE---SKRFIHRDLAARNLLLATRDLV 160
Query: 568 HLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAP 599
+ DFG+ + L + +D + Q + AP
Sbjct: 161 KIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVYKARIQDGI----EVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY+ +D I E V V + + + F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 539
++ S +V+E M HG L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N ++ + + DFGM + + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGA-FKSFDIECDMMKRIRHRNLIKIISS-- 492
+G+G V++ + G VAVK+F + E + F+ +I ++ +RH N++ I+S
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVL--LRHDNILGFIASDM 72
Query: 493 -CSNDDFK-ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH---FGYS- 546
N + L+ Y HGSL L L+ L + + A L +LH FG
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLYDFLQRQT--LEPHLALRLAVSAACGLAHLHVEIFGTQG 130
Query: 547 -VPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
I H D K NVL+ N+ ++D G+A
Sbjct: 131 KPAIAHRDFKSRNVLVKSNLQCCIADLGLA 160
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 80
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 81 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLY 135
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 191
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 192 VATRWYRAP 200
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 96
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 97 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 151
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 207
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 208 VATRWYRAP 216
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAV-KVFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+ K+ +++ + E ++
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILL 80
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 81 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 135
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 191
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 192 VATRWYRAP 200
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 80
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 81 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 135
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEY 191
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 192 VATRWYRAP 200
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E +K +RH ++IK+ + +V+EY + + D +R
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRF--FQQ 116
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
+ A+EY H I+H DLKP N+LLDDN+ ++DFG++
Sbjct: 117 IICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLS 155
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVYKARIQDGI----EVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY+ +D I E V V + + + F E +MK ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 539
++ S +V+E M HG L+ L S + + + + + ++A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N ++ + + DFGM + + + D + L + +MAP
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVYKARIQDGI----EVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY+ +D I E V V + + + F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 539
++ S +V+E M HG L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N ++ + + DFGM + + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 66/154 (42%), Gaps = 29/154 (18%)
Query: 180 NKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWN-LKYILYLNLSSNSFTGPLPLEIG 238
N L F LTSL LYLG N+L S+P+ ++N L + YLNLS+N
Sbjct: 38 NSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS------- 90
Query: 239 NLRVLVQIDLSMNNFSGFIPTTIGD-LKDLQYLFLEYNRLQGSIPDSI-GGLIDLKSLDL 296
+P + D L L+ L L N+LQ S+PD + L LK L L
Sbjct: 91 ------------------LPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRL 131
Query: 297 SNNNISGAIPISLEKLLDLKYINVSFNKLEGEIP 330
N + ++L L+YI + N + P
Sbjct: 132 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 178 GGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWN-LKYILYLNLSSNSFTGPLPLE 236
GGNKL F LTSL L L +NQL S+P+ +++ L + L L++N LP
Sbjct: 60 GGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQS-LPDG 118
Query: 237 I-GNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIP 282
+ L L + L N L LQY++L N + P
Sbjct: 119 VFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 61/154 (39%), Gaps = 9/154 (5%)
Query: 113 SIPEEI-SNLTNLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXX 171
S+P + LT+LT +YLGGNKL NQL+
Sbjct: 42 SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQ 101
Query: 172 XXXXXXGGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWN-LKYILYLNLSSNSFT 230
N+L F LT L++L L NQL S+P +++ L + Y+ L N +
Sbjct: 102 LKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161
Query: 231 GPLPLEIGNLRVLVQIDLSMNNFSGFIPTTIGDL 264
P +R L + +N SG + + G +
Sbjct: 162 CTCP----GIRYLSEW---INKHSGVVRNSAGSV 188
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 246 IDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSI-GGLIDLKSLDLSNNNISGA 304
+DL N+ +L L L+L N+LQ S+P+ + L L L+LS N +
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQSL 91
Query: 305 IPISLEKLLDLKYINVSFNKLE 326
+KL LK + ++ N+L+
Sbjct: 92 PNGVFDKLTQLKELALNTNQLQ 113
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 81
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 82 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 136
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 137 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 192
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 193 VATRWYRAP 201
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 23 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 82
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 83 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 137
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 138 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 193
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 194 VATRWYRAP 202
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 14 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 73
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 74 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 128
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 129 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 184
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 185 VATRWYRAP 193
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 80
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 81 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 135
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 191
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 192 VATRWYRAP 200
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 74
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 75 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 129
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 130 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 185
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 186 VATRWYRAP 194
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 453 IEVAVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHG 509
+ VAVK L A F E + M + HRNLI++ K +V E P G
Sbjct: 37 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLG 95
Query: 510 SLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVA 567
SL L + +++L R + VA + YL S IH DL N+LL +
Sbjct: 96 SLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLV 150
Query: 568 HLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAP 599
+ DFG+ + L + +D + Q + AP
Sbjct: 151 KIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 78
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 79 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 133
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 189
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 190 VATRWYRAP 198
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 76
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 77 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 131
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLAR-VADPDHDHTGFLTEY 187
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 188 VATRWYRAP 196
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 444 VYKARIQDGIEVAVKVFDLQYEGA-FKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALV 502
VY+ R + I+VA+KV E A + E +M ++ + ++++I C + LV
Sbjct: 30 VYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLV 87
Query: 503 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLD 562
+E G L K L + + ++ V+ ++YL +H DL NVLL
Sbjct: 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLV 144
Query: 563 DNMVAHLSDFGMAKPLLKEDQSLT 586
+ A +SDFG++K L +D T
Sbjct: 145 NRHYAKISDFGLSKALGADDSYYT 168
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 74
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 75 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 129
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 130 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 185
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 186 VATRWYRAP 194
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 76
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 77 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 131
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEY 187
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 188 VATRWYRAP 196
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 76
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 77 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 131
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEY 187
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 188 VATRWYRAP 196
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 144
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTL-ATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + +T TL T Y+AP
Sbjct: 145 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWTLCGTPEYLAP 193
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 28/178 (15%)
Query: 434 NLIGRGGVASVY--KARIQDGIEVAVKVFDLQYEGAFK--SFDIECDMMKRIRHRNLIKI 489
++G G + V+ K R+ G A+K ++ AF+ S + E ++K+I+H N++ +
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKC--IKKSPAFRDSSLENEIAVLKKIKHENIVTL 71
Query: 490 ISSCSNDDFKALVLEYMPHGS-----LEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG 544
+ LV++ + G LE+ +Y+ + Q+ V SA++YLH
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ------VLSAVKYLH-- 123
Query: 545 YSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
I+H DLKP N+L ++N ++DFG++K +Q+ + T GY+AP
Sbjct: 124 -ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAP 176
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 453 IEVAVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHG 509
+ VAVK L A F E + M + HRNLI++ K +V E P G
Sbjct: 47 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLG 105
Query: 510 SLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVA 567
SL L + +++L R + VA + YL S IH DL N+LL +
Sbjct: 106 SLLDRLRKHQGHFLLGTLSRYAVQ--VAEGMGYLE---SKRFIHRDLAARNLLLATRDLV 160
Query: 568 HLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAP 599
+ DFG+ + L + +D + Q + AP
Sbjct: 161 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGA--FKSFDIECDMMKRIRHRNLIKIISS 492
+G+G + V + ++ G E A K+ + + A + + E + + ++H N++++ S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + L+ + + G L + + + Y + + + LE + + + ++H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLHCHQMGVVHR 145
Query: 553 DLKPNNVLLDDNM---VAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
DLKP N+LL + L+DFG+A + E Q+ T GY++P
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSP 193
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 76
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 77 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 131
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 187
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 188 VATRWYRAP 196
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTL-ATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + +T TL T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWTLCGTPEYLAP 208
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 25 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 84
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 85 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 139
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 140 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 195
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 196 VATRWYRAP 204
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 76
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 77 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 131
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 187
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 188 VATRWYRAP 196
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 453 IEVAVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHG 509
+ VAVK L A F E + M + HRNLI++ K +V E P G
Sbjct: 41 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLG 99
Query: 510 SLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVA 567
SL L + +++L R + VA + YL S IH DL N+LL +
Sbjct: 100 SLLDRLRKHQGHFLLGTLSRYAVQ--VAEGMGYLE---SKRFIHRDLAARNLLLATRDLV 154
Query: 568 HLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAP 599
+ DFG+ + L + +D + Q + AP
Sbjct: 155 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 22/179 (12%)
Query: 436 IGRGGVASVYKARIQ-DGIEVAVKVFDL--QYEGAFKSFDIECDMMKRIRHRNLIK---- 488
IG G K R + DG + K D E + E ++++ ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 489 IISSCSNDDFKALVLEYMPHGSLE----KCLYSSNYILDIFQRLNIMIDVASALEYLHF- 543
II + + +V+EY G L K Y+ + F L +M + AL+ H
Sbjct: 74 IIDRTNTTLY--IVMEYCEGGDLASVITKGTKERQYLDEEFV-LRVMTQLTLALKECHRR 130
Query: 544 ---GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
G++V +H DLKP NV LD L DFG+A+ +L D+ + + + T YM+P
Sbjct: 131 SDGGHTV--LHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDEDFAK-EFVGTPYYMSP 185
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 453 IEVAVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHG 509
+ VAVK L A F E + M + HRNLI++ K +V E P G
Sbjct: 41 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLG 99
Query: 510 SLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVA 567
SL L + +++L R + VA + YL S IH DL N+LL +
Sbjct: 100 SLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLV 154
Query: 568 HLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAP 599
+ DFG+ + L + +D + Q + AP
Sbjct: 155 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Query: 179 GNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWN-LKYILYLNLSSNSFTGPLPLEI 237
GN+L F LT+L+ L L NQL S+P +++ L + YLNL+ N LP +
Sbjct: 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS-LPKGV 152
Query: 238 -GNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSI-GGLIDLKSLD 295
L L ++DLS N L L+ L L N+L+ S+PD + L L+ +
Sbjct: 153 FDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIW 211
Query: 296 LSNNNISGAIPISLEKLLDLKYINVSFNKLEGEI 329
L +N P ++Y++ NK G +
Sbjct: 212 LHDNPWDCTCP-------GIRYLSEWINKHSGVV 238
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 32/183 (17%)
Query: 178 GGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPLEI 237
GGNKL + LT+L L L NQL S+P+ +++ ++
Sbjct: 71 GGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFD--------------------KL 108
Query: 238 GNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSI-GGLIDLKSLDL 296
NL+ LV ++ N L +L YL L +N+LQ S+P + L +L LDL
Sbjct: 109 TNLKELVLVE---NQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDL 164
Query: 297 SNNNISGAIPISLEKLLDLKYINVSFNKLEGEIPREGPFRNFSAESF---KGNELLCGTP 353
S N + +KL LK + + N+L+ +P +G F ++ + N C P
Sbjct: 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS-VP-DGVFDRLTSLQYIWLHDNPWDCTCP 222
Query: 354 NLQ 356
++
Sbjct: 223 GIR 225
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 453 IEVAVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHG 509
+ VAVK L A F E + M + HRNLI++ K +V E P G
Sbjct: 37 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLG 95
Query: 510 SLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVA 567
SL L + +++L R + VA + YL S IH DL N+LL +
Sbjct: 96 SLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLV 150
Query: 568 HLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAP 599
+ DFG+ + L + +D + Q + AP
Sbjct: 151 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 24/183 (13%)
Query: 432 ENNLIGRGGVASVYKARIQDGI------EVAVKVFDLQYEGAFKSFDIECDMMKRIR-HR 484
+ +++G G AR+Q I E AVK+ + Q E +M+ + + HR
Sbjct: 17 QEDVLGEGA-----HARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHR 71
Query: 485 NLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG 544
N++++I +D LV E M GS+ ++ + ++ + ++ DVASAL++LH
Sbjct: 72 NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLH-- 128
Query: 545 YSVPIIHCDLKPNNVLLDD-NMVA--HLSDFGMAKPL-LKEDQSLTQTQTLAT----IGY 596
+ I H DLKP N+L + N V+ + DFG+ + L D S T L T Y
Sbjct: 129 -NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 597 MAP 599
MAP
Sbjct: 188 MAP 190
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 453 IEVAVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHG 509
+ VAVK L A F E + M + HRNLI++ K +V E P G
Sbjct: 37 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLG 95
Query: 510 SLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVA 567
SL L + +++L R + VA + YL S IH DL N+LL +
Sbjct: 96 SLLDRLRKHQGHFLLGTLSRYAVQ--VAEGMGYLE---SKRFIHRDLAARNLLLATRDLV 150
Query: 568 HLSDFGMAKPLLK-EDQSLTQTQTLATIGYMAP 599
+ DFG+ + L + +D + Q + AP
Sbjct: 151 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 22/179 (12%)
Query: 436 IGRGGVASVYKARIQ-DGIEVAVKVFDL--QYEGAFKSFDIECDMMKRIRHRNLIK---- 488
IG G K R + DG + K D E + E ++++ ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 489 IISSCSNDDFKALVLEYMPHGSLE----KCLYSSNYILDIFQRLNIMIDVASALEYLHF- 543
II + + +V+EY G L K Y+ + F L +M + AL+ H
Sbjct: 74 IIDRTNTTLY--IVMEYCEGGDLASVITKGTKERQYLDEEFV-LRVMTQLTLALKECHRR 130
Query: 544 ---GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
G++V +H DLKP NV LD L DFG+A+ +L D S + + T YM+P
Sbjct: 131 SDGGHTV--LHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKA-FVGTPYYMSP 185
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 433 NNLIGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIR-HRNLIKII 490
+ L+G G A V A +Q+G E AVK+ + Q + E + + + + ++N++++I
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
+D LV E + GS+ + + + + ++ DVA+AL++LH + I
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKH-FNEREASRVVRDVAAALDFLH---TKGIA 133
Query: 551 HCDLKPNNVLLD 562
H DLKP N+L +
Sbjct: 134 HRDLKPENILCE 145
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F IG G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E ++M+++ + ++++I C + + LV+E G L K L + ++ D + ++
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 477
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
V+ ++YL +H DL NVLL A +SDFG++K L+ D++ + QT
Sbjct: 478 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGK 533
Query: 594 --IGYMAP 599
+ + AP
Sbjct: 534 WPVKWYAP 541
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 13/178 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-----GIEVAVKVFDLQYEGAFKSFDIECDMMKRIR 482
N F + ++G+GG V +++ + K + +G + + E +++++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN-EKQILEKVN 242
Query: 483 HRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYL 541
R ++ + + D LVL M G L+ +Y + + ++ LE L
Sbjct: 243 SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL 302
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H I++ DLKP N+LLDD+ +SD G+A + + T + T+GYMAP
Sbjct: 303 H---RERIVYRDLKPENILLDDHGHIRISDLGLA---VHVPEGQTIKGRVGTVGYMAP 354
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVYKARIQDGI----EVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY+ +D I E V V + + + F E +MK ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 539
++ S +V+E M HG L+ L S + + + + + ++A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N ++ + + DFGM + + + D + L + +MAP
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E ++M+++ + ++++I C + + LV+E G L K L + ++ D + ++
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 478
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
V+ ++YL +H DL NVLL A +SDFG++K L+ D++ + QT
Sbjct: 479 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGK 534
Query: 594 --IGYMAP 599
+ + AP
Sbjct: 535 WPVKWYAP 542
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 151
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 200
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 25/180 (13%)
Query: 436 IGRGGVASVYKARIQDGIEVAVKVFDLQYEGA-FKSFDIECDMMKRIRHRNLIKIISSCS 494
IG+G V+ + + G +VAVKVF E + F+ +I ++ +RH N++ I++
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVL--MRHENILGFIAA-- 99
Query: 495 NDDFKA--------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY- 545
D K L+ +Y +GSL L S+ LD L + S L +LH
Sbjct: 100 --DIKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 546 ----SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKE--DQSLTQTQTLATIGYMAP 599
I H DLK N+L+ N ++D G+A + + + + + T YM P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVYKARIQDGI----EVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY+ +D I E V V + + + F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 539
++ S +V+E M HG L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N ++ + + DFGM + + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G V A R+ + VAVK+ D++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH-------F 543
+ + L LEY G L F R+ +I + A + H +
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 25/192 (13%)
Query: 430 FSENNL-----IGRGGVASVYKARI-----QDGI-EVAVKVFD-LQYEGAFKSFDIECDM 477
F NNL +G G V +A +D + +VAVK+ + ++ E +
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 478 MKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYI---------LDIFQR 527
M + +H N++ ++ +C++ ++ EY +G L L L++
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 528 LNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ 587
L+ VA + +L S IH D+ NVLL + VA + DFG+A+ ++ + + +
Sbjct: 155 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 211
Query: 588 TQTLATIGYMAP 599
+ +MAP
Sbjct: 212 GNARLPVKWMAP 223
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 14/172 (8%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDL-QYEGAFKSFDIECDMMKRIRHRNLIKIISSC 493
+G G V+ + G+E +K + + + + + E +++K + H N+IKI
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQR---LNIMIDVASALEYLHFGYSVPII 550
+ +V+E G L + + S+ +M + +AL Y H S ++
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVV 146
Query: 551 HCDLKPNNVLLDD---NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP N+L D + + DFG+A+ L K D+ T T YMAP
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAE-LFKSDEH--STNAAGTALYMAP 195
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 455 VAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEK 513
VAVK+ D++ ++ E + K + H N++K + + L LEY G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-- 91
Query: 514 CLYSSNYILDIFQRL--NIMIDVASALEYLH-------FGYSVPIIHCDLKPNNVLLDDN 564
F R+ +I + A + H + + + I H D+KP N+LLD+
Sbjct: 92 -----------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 140
Query: 565 MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+SDFG+A ++ + T+ Y+AP
Sbjct: 141 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G V A R+ + VAVK+ D++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH-------F 543
+ + L LEY G L F R+ +I + A + H +
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E ++M+++ + ++++I C + + LV+E G L K L + ++ D + ++
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 119
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPL-LKEDQSLTQTQTLA 592
V+ ++YL +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 120 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW 176
Query: 593 TIGYMAP 599
+ + AP
Sbjct: 177 PVKWYAP 183
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 455 VAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEK 513
VAVK+ D++ ++ E + K + H N++K + + L LEY G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-- 92
Query: 514 CLYSSNYILDIFQRL--NIMIDVASALEYLH-------FGYSVPIIHCDLKPNNVLLDDN 564
F R+ +I + A + H + + + I H D+KP N+LLD+
Sbjct: 93 -----------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 141
Query: 565 MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+SDFG+A ++ + T+ Y+AP
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 13/178 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-----GIEVAVKVFDLQYEGAFKSFDIECDMMKRIR 482
N F + ++G+GG V +++ + K + +G + + E +++++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN-EKQILEKVN 242
Query: 483 HRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYL 541
R ++ + + D LVL M G L+ +Y + + ++ LE L
Sbjct: 243 SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL 302
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H I++ DLKP N+LLDD+ +SD G+A + + T + T+GYMAP
Sbjct: 303 H---RERIVYRDLKPENILLDDHGHIRISDLGLA---VHVPEGQTIKGRVGTVGYMAP 354
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKIIS 491
+G G V A G +VA+K+ + L + E ++ +RH ++IK+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 492 SCSNDDFKALVLEYMPHG----SLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ D +V+EY + +++ S FQ+ + SA+EY H
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH---RH 132
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
I+H DLKP N+LLD+++ ++DFG++
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLS 160
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 125/298 (41%), Gaps = 38/298 (12%)
Query: 16 IFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSSTPKLNFLSSLSNCKYL 75
+ N + L+ L L N P NL NL RL L+ N ++ +S+LS L
Sbjct: 107 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-------ISALSGLTSL 157
Query: 76 KYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEIS---NLTNLTTIYLGGN 132
+ LSF N D + + NL+ + +IS + +IS LTNL ++ N
Sbjct: 158 QQLSFGNQVTD---LKPLANLTT------LERLDISSNKVSDISVLAKLTNLESLIATNN 208
Query: 133 KLNGSIPIAXXXXXXXXXXXXEDNQLE--GSIPXXXXXXXXXXXXXXGGNKLSGFVPACF 190
+++ P+ NQL+ G++ N++S P
Sbjct: 209 QISDITPLG--ILTNLDELSLNGNQLKDIGTL----ASLTNLTDLDLANNQISNLAP--L 260
Query: 191 GNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPLEIGNLRVLVQIDLSM 250
LT L L LG+NQ+++I S L L + L L+ N P I NL+ L + L
Sbjct: 261 SGLTKLTELKLGANQISNI-SPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYF 317
Query: 251 NNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLSNNNISGAIPIS 308
NN S P + L LQ LF N++ S S+ L ++ L +N IS P++
Sbjct: 318 NNISDISP--VSSLTKLQRLFFANNKV--SDVSSLANLTNINWLSAGHNQISDLTPLA 371
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 104/256 (40%), Gaps = 47/256 (18%)
Query: 66 LSSLSNCKYLKYLS---FSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLT 122
+ S+ +YL L+ FSNN L I P + NLT
Sbjct: 57 IKSIDGVEYLNNLTQINFSNNQLTDITP---------------------------LKNLT 89
Query: 123 NLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKL 182
L I + N++ P+A +NQ+ P N +
Sbjct: 90 KLVDILMNNNQIADITPLANLTNLTGLTLF--NNQITDIDP--LKNLTNLNRLELSSNTI 145
Query: 183 SGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPL-EIGNLR 241
S + LTSL+ L G NQ+T + L NL + L++SSN + L ++ NL
Sbjct: 146 SDI--SALSGLTSLQQLSFG-NQVTDLKP-LANLTTLERLDISSNKVSDISVLAKLTNLE 201
Query: 242 VLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLSNNNI 301
L+ + N S P +G L +L L L N+L+ ++ L +L LDL+NN I
Sbjct: 202 SLIATN---NQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQI 254
Query: 302 SGAIPIS-LEKLLDLK 316
S P+S L KL +LK
Sbjct: 255 SNLAPLSGLTKLTELK 270
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 29/249 (11%)
Query: 2 LLWGNNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSSTP 61
L +GN + P + N + L RL++ N + L NL+ L N ++ TP
Sbjct: 160 LSFGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 215
Query: 62 KLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQ--SMEVFFMFNCNISGSIPEEIS 119
L L+N L SL+G + IG L+ ++ + N IS P +S
Sbjct: 216 ----LGILTNLDEL--------SLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LS 261
Query: 120 NLTNLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGG 179
LT LT + LG N+++ P+A +NQLE P
Sbjct: 262 GLTKLTELKLGANQISNISPLA--GLTALTNLELNENQLEDISPISNLKNLTYLTLYF-- 317
Query: 180 NKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPLEIGN 239
N +S P +LT L+ L+ +N+++ + S+L NL I +L+ N + PL N
Sbjct: 318 NNISDISPVS--SLTKLQRLFFANNKVSDV-SSLANLTNINWLSAGHNQISDLTPL--AN 372
Query: 240 LRVLVQIDL 248
L + Q+ L
Sbjct: 373 LTRITQLGL 381
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKIIS 491
+G G V A G +VA+K+ + L + E ++ +RH ++IK+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 492 SCSNDDFKALVLEYMPHG----SLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ D +V+EY + +++ S FQ+ + SA+EY H
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH---RH 122
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
I+H DLKP N+LLD+++ ++DFG++
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLS 150
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G V A R+ + VAVK+ D++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH-------F 543
+ + L LEY G L F R+ +I + A + H +
Sbjct: 74 RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKIIS 491
+G G V A G +VA+K+ + L + E ++ +RH ++IK+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 492 SCSNDDFKALVLEYMPHG----SLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ D +V+EY + +++ S FQ+ + SA+EY H
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH---RH 131
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
I+H DLKP N+LLD+++ ++DFG++
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLS 159
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E ++M+++ + ++++I C + + LV+E G L K L + ++ D + ++
Sbjct: 56 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 113
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
V+ ++YL +H DL NVLL A +SDFG++K L+ D++ + QT
Sbjct: 114 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGK 169
Query: 594 --IGYMAP 599
+ + AP
Sbjct: 170 WPVKWYAP 177
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 427 TNGFSENNLIGRGGVASVYK-ARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRI---- 481
T F E IG G SV+K + DG A+K G+ E + ++ +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD----EQNALREVYAHA 61
Query: 482 ---RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL---NIMIDVA 535
+H ++++ S+ + DD + EY GSL + + I+ F+ ++++ V
Sbjct: 62 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 121
Query: 536 SALEYLHFGYSVPIIHCDLKPNNVLL 561
L Y+H S+ ++H D+KP+N+ +
Sbjct: 122 RGLRYIH---SMSLVHMDIKPSNIFI 144
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVK--VFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG+G V+KAR + G +VA+K + + + EG + E +++ ++H N++ +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 493 CSN-----DDFKA---LVLEYMPH---GSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
C + KA LV ++ H G L L + L +R+ M+ + L Y+
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQML--LNGLYYI 141
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP--LLKEDQSLTQTQTLATIGYMAP 599
H I+H D+K NVL+ + V L+DFG+A+ L K Q + T+ Y P
Sbjct: 142 HRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 427 TNGFSENNLIGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRI---- 481
T F E IG G SV+K + DG A+K G+ E + ++ +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD----EQNALREVYAHA 65
Query: 482 ---RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL---NIMIDVA 535
+H ++++ S+ + DD + EY GSL + + I+ F+ ++++ V
Sbjct: 66 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 125
Query: 536 SALEYLHFGYSVPIIHCDLKPNNVLL 561
L Y+H S+ ++H D+KP+N+ +
Sbjct: 126 RGLRYIH---SMSLVHMDIKPSNIFI 148
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E ++M+++ + ++++I C + + LV+E G L K L + ++ D + ++
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 119
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
V+ ++YL +H DL NVLL A +SDFG++K L+ D++ + QT
Sbjct: 120 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGK 175
Query: 594 --IGYMAP 599
+ + AP
Sbjct: 176 WPVKWYAP 183
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 12/130 (9%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSL-EKCLYSSNYILDIFQRLNIMI 532
E ++K + H N+IK+ + + LV E+ G L E+ + + + D NIM
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII--NRHKFDECDAANIMK 153
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDN---MVAHLSDFGMAKPLLKEDQSLTQTQ 589
+ S + YLH I+H D+KP N+LL++ + + DFG++ +D L
Sbjct: 154 QILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLS-SFFSKDYKL--RD 207
Query: 590 TLATIGYMAP 599
L T Y+AP
Sbjct: 208 RLGTAYYIAP 217
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 424 FQATNGFSENNLIGRGG---VASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKR 480
F +++ IG G V+S Y + + + K+ +++ + E ++ R
Sbjct: 39 FDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIK-KISPFEHQTYCQRTLREIQILLR 97
Query: 481 IRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMID 533
RH N+I I D +A LE M + + L ++ Y L Q+L+ +
Sbjct: 98 FRHENVIGI-----RDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQ 152
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKE-DQSLTQTQTLA 592
+ L+Y+H S ++H DLKP+N+L++ + DFG+A+ E D + T+ +A
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 593 TIGYMAP 599
T Y AP
Sbjct: 210 TRWYRAP 216
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKIIS 491
+G G V A G +VA+K+ + L + E ++ +RH ++IK+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 492 SCSNDDFKALVLEYMPHG----SLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ D +V+EY + +++ S FQ+ + SA+EY H
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH---RH 126
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
I+H DLKP N+LLD+++ ++DFG++
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLS 154
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G V A R+ + VAVK+ D++ ++ E + K + H N++K
Sbjct: 14 LGEGAAGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH-------F 543
+ + L LEY G L F R+ +I + A + H +
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E ++M+++ + ++++I C + + LV+E G L K L + ++ D + ++
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 115
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
V+ ++YL +H DL NVLL A +SDFG++K L+ D++ + QT
Sbjct: 116 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGK 171
Query: 594 --IGYMAP 599
+ + AP
Sbjct: 172 WPVKWYAP 179
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E ++M+++ + ++++I C + + LV+E G L K L + ++ D + ++
Sbjct: 68 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 125
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
V+ ++YL +H DL NVLL A +SDFG++K L+ D++ + QT
Sbjct: 126 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGK 181
Query: 594 --IGYMAP 599
+ + AP
Sbjct: 182 WPVKWYAP 189
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 427 TNGFSENNLIGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRI---- 481
T F E IG G SV+K + DG A+K G+ E + ++ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD----EQNALREVYAHA 63
Query: 482 ---RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL---NIMIDVA 535
+H ++++ S+ + DD + EY GSL + + I+ F+ ++++ V
Sbjct: 64 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 536 SALEYLHFGYSVPIIHCDLKPNNVLL 561
L Y+H S+ ++H D+KP+N+ +
Sbjct: 124 RGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 455 VAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEK 513
VAVK+ D++ ++ E + K + H N++K + + L LEY G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-- 92
Query: 514 CLYSSNYILDIFQRL--NIMIDVASALEYLH-------FGYSVPIIHCDLKPNNVLLDDN 564
F R+ +I + A + H + + + I H D+KP N+LLD+
Sbjct: 93 -----------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 141
Query: 565 MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+SDFG+A ++ + T+ Y+AP
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 455 VAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEK 513
VAVK+ D++ ++ E + K + H N++K + + L LEY G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-- 92
Query: 514 CLYSSNYILDIFQRL--NIMIDVASALEYLH-------FGYSVPIIHCDLKPNNVLLDDN 564
F R+ +I + A + H + + + I H D+KP N+LLD+
Sbjct: 93 -----------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 141
Query: 565 MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+SDFG+A ++ + T+ Y+AP
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 455 VAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEK 513
VAVK+ D++ ++ E + K + H N++K + + L LEY G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-- 92
Query: 514 CLYSSNYILDIFQRL--NIMIDVASALEYLH-------FGYSVPIIHCDLKPNNVLLDDN 564
F R+ +I + A + H + + + I H D+KP N+LLD+
Sbjct: 93 -----------FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 141
Query: 565 MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+SDFG+A ++ + T+ Y+AP
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 427 TNGFSENNLIGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRI---- 481
T F E IG G SV+K + DG A+K G+ E + ++ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD----EQNALREVYAHA 63
Query: 482 ---RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL---NIMIDVA 535
+H ++++ S+ + DD + EY GSL + + I+ F+ ++++ V
Sbjct: 64 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 536 SALEYLHFGYSVPIIHCDLKPNNVLL 561
L Y+H S+ ++H D+KP+N+ +
Sbjct: 124 RGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 228
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 12/173 (6%)
Query: 433 NNLIGRGGVASVYKA----RIQDGIEVAVKVF--DLQYEGAFKSFDIECDMMKRIRHRNL 486
N ++G G VY+ + I VAVK D + K F E +MK + H ++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHI 87
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K+I + +++E P+G L L + L + + + + A+ YL S
Sbjct: 88 VKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ +H D+ N+L+ L DFG+++ + ED L I +M+P
Sbjct: 144 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSP 195
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 18/164 (10%)
Query: 427 TNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRH-- 483
+ F E ++G+G V KAR D A+K E + E ++ + H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNHQY 63
Query: 484 -----------RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI 532
RN +K ++ + EY + +L ++S N + +
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 576
+ AL Y+H S IIH +LKP N+ +D++ + DFG+AK
Sbjct: 124 QILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 25/192 (13%)
Query: 430 FSENNL-----IGRGGVASVYKARI-----QDGI-EVAVKVFD-LQYEGAFKSFDIECDM 477
F NNL +G G V +A +D + +VAVK+ + ++ E +
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 478 MKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYI---------LDIFQR 527
M + +H N++ ++ +C++ ++ EY +G L L L++
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 528 LNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ 587
L+ VA + +L S IH D+ NVLL + VA + DFG+A+ ++ + + +
Sbjct: 163 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 219
Query: 588 TQTLATIGYMAP 599
+ +MAP
Sbjct: 220 GNARLPVKWMAP 231
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E ++M+++ + ++++I C + + LV+E G L K L + ++ D + ++
Sbjct: 76 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 133
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
V+ ++YL +H DL NVLL A +SDFG++K L+ D++ + QT
Sbjct: 134 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGK 189
Query: 594 --IGYMAP 599
+ + AP
Sbjct: 190 WPVKWYAP 197
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 11/165 (6%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDI-ECDMMKRIRHRNLIKIISSCSN 495
G GGV + + R G+ +A K+ L+ + A ++ I E ++ ++ + +
Sbjct: 27 GNGGVVTKVQHR-PSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 85
Query: 496 DDFKALVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
D ++ +E+M GSL++ L + I +I +++I V L YL + I+H D+
Sbjct: 86 DGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREKHQ--IMHRDV 141
Query: 555 KPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
KP+N+L++ L DFG++ L+ S+ + + T YMAP
Sbjct: 142 KPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMAP 182
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 12/173 (6%)
Query: 433 NNLIGRGGVASVYKARIQ----DGIEVAVKVF--DLQYEGAFKSFDIECDMMKRIRHRNL 486
N ++G G VY+ + I VAVK D + K F E +MK + H ++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHI 75
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K+I + +++E P+G L L + L + + + + A+ YL S
Sbjct: 76 VKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---S 131
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ +H D+ N+L+ L DFG+++ + ED L I +M+P
Sbjct: 132 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSP 183
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVK--VFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG+G V+KAR + G +VA+K + + + EG + E +++ ++H N++ +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 493 CSNDDFKA-----------LVLEYMPH---GSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
C KA LV ++ H G L L + L +R+ M+ L
Sbjct: 86 CRT---KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQML-----L 135
Query: 539 EYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP--LLKEDQSLTQTQTLATIGY 596
L++ + I+H D+K NVL+ + V L+DFG+A+ L K Q + T+ Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 597 MAP 599
P
Sbjct: 196 RPP 198
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 151
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 200
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 80
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 81 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 135
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEX 191
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 192 VATRWYRAP 200
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 81
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
R RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 82 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 136
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T +
Sbjct: 137 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEX 192
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 193 VATRWYRAP 201
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G V A R+ + VAVK+ D++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH-------F 543
+ + L LEY G L F R+ +I + A + H +
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+++D ++DFG+AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G V A R+ + VAVK+ D++ ++ E + K + H N++K
Sbjct: 13 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH-------F 543
+ + L LEY G L F R+ +I + A + H +
Sbjct: 72 RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 19/174 (10%)
Query: 417 RFTHLELFQATNGFSENNLIGRGGVAS----VYKARIQDGIEVAVKVFDLQYEGAFKSFD 472
R +H+ L ++G+ IG G + V+KA +E AVKV D + +
Sbjct: 17 RGSHMNLV-FSDGYVVKETIGVGSYSECKRCVHKA---TNMEYAVKVIDKSKRDPSEEIE 72
Query: 473 IECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI 532
I +++ +H N+I + + LV E M G L + + + ++
Sbjct: 73 I---LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLH 128
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDN----MVAHLSDFGMAKPLLKED 582
+ +EYLH S ++H DLKP+N+L D + DFG AK L E+
Sbjct: 129 TIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G V A R+ + VAVK+ D++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH-------F 543
+ + L LEY G L F R+ +I + A + H +
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G V A R+ + VAVK+ D++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH-------F 543
+ + L LEY G L F R+ +I + A + H +
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G V A R+ + VAVK+ D++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH-------F 543
+ + L LEY G L F R+ +I + A + H +
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 131/313 (41%), Gaps = 40/313 (12%)
Query: 1 LLLWGNNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSST 60
+L+ N + P + N + L+ L L N P NL NL RL L+ N ++
Sbjct: 95 ILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-- 148
Query: 61 PKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEIS- 119
+S+LS L+ LSF N D + + NL+ + +IS + +IS
Sbjct: 149 -----ISALSGLTSLQQLSFGNQVTD---LKPLANLTT------LERLDISSNKVSDISV 194
Query: 120 --NLTNLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLE--GSIPXXXXXXXXXXXX 175
LTNL ++ N+++ P+ NQL+ G++
Sbjct: 195 LAKLTNLESLIATNNQISDITPLG--ILTNLDELSLNGNQLKDIGTL----ASLTNLTDL 248
Query: 176 XXGGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPL 235
N++S P LT L L LG+NQ+++I S L L + L L+ N P
Sbjct: 249 DLANNQISNLAP--LSGLTKLTELKLGANQISNI-SPLAGLTALTNLELNENQLEDISP- 304
Query: 236 EIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLD 295
I NL+ L + L NN S P + L LQ LF N++ S S+ L ++ L
Sbjct: 305 -ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKV--SDVSSLANLTNINWLS 359
Query: 296 LSNNNISGAIPIS 308
+N IS P++
Sbjct: 360 AGHNQISDLTPLA 372
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 104/256 (40%), Gaps = 47/256 (18%)
Query: 66 LSSLSNCKYLKYLS---FSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLT 122
+ S+ +YL L+ FSNN L I P + NLT
Sbjct: 58 IKSIDGVEYLNNLTQINFSNNQLTDITP---------------------------LKNLT 90
Query: 123 NLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKL 182
L I + N++ P+A +NQ+ P N +
Sbjct: 91 KLVDILMNNNQIADITPLANLTNLTGLTLF--NNQITDIDP--LKNLTNLNRLELSSNTI 146
Query: 183 SGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPL-EIGNLR 241
S + LTSL+ L G NQ+T + L NL + L++SSN + L ++ NL
Sbjct: 147 SDI--SALSGLTSLQQLSFG-NQVTDLKP-LANLTTLERLDISSNKVSDISVLAKLTNLE 202
Query: 242 VLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLSNNNI 301
L+ + N S P +G L +L L L N+L+ ++ L +L LDL+NN I
Sbjct: 203 SLIATN---NQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQI 255
Query: 302 SGAIPIS-LEKLLDLK 316
S P+S L KL +LK
Sbjct: 256 SNLAPLSGLTKLTELK 271
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 29/249 (11%)
Query: 2 LLWGNNFSGTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSSTP 61
L +GN + P + N + L RL++ N + L NL+ L N ++ TP
Sbjct: 161 LSFGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 216
Query: 62 KLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQ--SMEVFFMFNCNISGSIPEEIS 119
L L+N L SL+G + IG L+ ++ + N IS P +S
Sbjct: 217 ----LGILTNLDEL--------SLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LS 262
Query: 120 NLTNLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGG 179
LT LT + LG N+++ P+A +NQLE P
Sbjct: 263 GLTKLTELKLGANQISNISPLA--GLTALTNLELNENQLEDISPISNLKNLTYLTLYF-- 318
Query: 180 NKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPLEIGN 239
N +S P +LT L+ L+ +N+++ + S+L NL I +L+ N + PL N
Sbjct: 319 NNISDISPVS--SLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQISDLTPL--AN 373
Query: 240 LRVLVQIDL 248
L + Q+ L
Sbjct: 374 LTRITQLGL 382
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGA--FKSFDIECDMMKRIRHRNLIKIISS 492
+G+G + V + + E A K+ + + A + + E + + ++H N++++ S
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + F LV + + G L + + + Y + + + LE ++ + I+H
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIHQILESVNHIHQHDIVHR 154
Query: 553 DLKPNNVLLDDN---MVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
DLKP N+LL L+DFG+A + E Q+ T GY++P
Sbjct: 155 DLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAW--FGFAGTPGYLSP 202
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 472 DIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIM 531
+ E +++K++ H +IKI + +D+ +VLE M G L + + + + +L
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YF 259
Query: 532 IDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQT 588
+ A++YLH IIH DLKP NVLL +++ + ++DFG +K L + SL +T
Sbjct: 260 YQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRT 314
Query: 589 QTLATIGYMAP 599
T Y+AP
Sbjct: 315 -LCGTPTYLAP 324
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E ++M+++ + ++++I C + + LV+E G L K L + ++ D + ++
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 135
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
V+ ++YL +H DL NVLL A +SDFG++K L+ D++ + QT
Sbjct: 136 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGK 191
Query: 594 --IGYMAP 599
+ + AP
Sbjct: 192 WPVKWYAP 199
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G V A R+ + VAVK+ D++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH-------F 543
+ + L LEY G L F R+ +I + A + H +
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E ++M+++ + ++++I C + + LV+E G L K L + ++ D + ++
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQ 135
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
V+ ++YL +H DL NVLL A +SDFG++K L+ D++ + QT
Sbjct: 136 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGK 191
Query: 594 --IGYMAP 599
+ + AP
Sbjct: 192 WPVKWYAP 199
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 12/173 (6%)
Query: 433 NNLIGRGGVASVYKARIQ----DGIEVAVKVF--DLQYEGAFKSFDIECDMMKRIRHRNL 486
N ++G G VY+ + I VAVK D + K F E +MK + H ++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHI 71
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K+I + +++E P+G L L + L + + + + A+ YL S
Sbjct: 72 VKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---S 127
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ +H D+ N+L+ L DFG+++ + ED L I +M+P
Sbjct: 128 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSP 179
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G V A R+ + VAVK+ D++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH-------F 543
+ + L LEY G L F R+ +I + A + H +
Sbjct: 74 RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEV-AVKVFDLQYEGAFKSFDIECDMM-KRI-----R 482
F + ++G+G V+ A + + A+K L+ + D+EC M+ KR+
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLAWE 77
Query: 483 HRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH 542
H L + + + V+EY+ G L + S + D+ + ++ L++LH
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLH 136
Query: 543 FGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S I++ DLK +N+LLD + ++DFGM K + D + T Y+AP
Sbjct: 137 ---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFCGTPDYIAP 188
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 73/188 (38%), Gaps = 13/188 (6%)
Query: 180 NKLSGFVPACFGNLTSLRNLYLGSN-QLTSI-PSTLWNLKYILYLNLSSNSFTGPLPLEI 237
N L+G A F LT L L L N QL + P+T L ++ L+L P
Sbjct: 65 NALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLF 124
Query: 238 GNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLS 297
L L + L NN T DL +L +LFL NR+ + GL L L L
Sbjct: 125 RGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLH 184
Query: 298 NNNISGAIPISLEKLLDLKYINVSFNKLEGEIPRE--GPFRNFSAESFKGNELLCGTPNL 355
N+++ P + L L + + N L +P E P R+ N +C
Sbjct: 185 QNHVARVHPHAFRDLGRLMTLYLFANNLS-MLPAEVLVPLRSLQYLRLNDNPWVCD---- 239
Query: 356 QVPPCRTR 363
CR R
Sbjct: 240 ----CRAR 243
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 78/210 (37%), Gaps = 25/210 (11%)
Query: 67 SSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLTNLTT 126
+S +C+ L L +N+L GI A L+ ++ N + P L +L T
Sbjct: 49 ASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHT 108
Query: 127 IYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKLSGFV 186
++L L P +DN L+ ++P
Sbjct: 109 LHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ-ALPDNT-------------------- 147
Query: 187 PACFGNLTSLRNLYLGSNQLTSIPSTLWN-LKYILYLNLSSNSFTGPLPLEIGNLRVLVQ 245
F +L +L +L+L N++ S+P + L + L L N P +L L+
Sbjct: 148 ---FRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMT 204
Query: 246 IDLSMNNFSGFIPTTIGDLKDLQYLFLEYN 275
+ L NN S + L+ LQYL L N
Sbjct: 205 LYLFANNLSMLPAEVLVPLRSLQYLRLNDN 234
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G V A R+ + VAVK+ D++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH-------F 543
+ + L LEY G L F R+ +I + A + H +
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G V A R+ + VAVK+ D++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH-------F 543
+ + L LEY G L F R+ +I + A + H +
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G V A R+ + VAVK+ D++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH-------F 543
+ + L LEY G L F R+ +I + A + H +
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 428 NGFSENNLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDI-ECDMMKRIRHRN 485
+ F + + +G G V+K + G+ +A K+ L+ + A ++ I E ++
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFG 544
++ + +D ++ +E+M GSL++ L + I + I +++I V L YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 126
Query: 545 YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ I+H D+KP+N+L++ L DFG++ L+ E + + T YM+P
Sbjct: 127 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSP 175
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 424 FQATNGFSENNLIGRG--GVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDI--ECDMMK 479
FQ+ + IG G G A + K+ +DG + +K ++ + + + E ++
Sbjct: 20 FQSMEKYVRLQKIGEGSFGKAILVKS-TEDGRQYVIKEINISRMSSKEREESRREVAVLA 78
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEK-------CLYSSNYILDIFQRLNIMI 532
++H N+++ S + +V++Y G L K L+ + ILD F +
Sbjct: 79 NMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF------V 132
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPL 578
+ AL+++H I+H D+K N+ L + L DFG+A+ L
Sbjct: 133 QICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E +M ++ H LI + + + L+LE++ G L + + +Y + + +N M
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ 157
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLS--DFGMAKPLLKEDQSLTQTQTL 591
L+++H I+H D+KP N++ + + + DFG+A L ++ T
Sbjct: 158 ACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE---IVKVTT 211
Query: 592 ATIGYMAP 599
AT + AP
Sbjct: 212 ATAEFAAP 219
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 219 ILYLNLSSNSFTGPLPLEIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQ 278
+ L L N FT +P E+ N + L IDLS N S + ++ L L L YNRL+
Sbjct: 33 VTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91
Query: 279 GSIPDSIGGLIDLKSLDLSNNNISGAIPISLEKLLDLKYINVSFNKL 325
P + GL L+ L L N+IS + L L ++ + N L
Sbjct: 92 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQ--YEGAFKSFDIECDMMKRIR 482
AT+ + IG G +VYKAR G VA+K + EG S E +++R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 483 ---HRNLIKIISSCS----NDDFK-ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
H N+++++ C+ + + K LV E++ + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
L++LH I+H DLKP N+L+ L+DFG+A+ + + T+
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALAPVVVTL 175
Query: 595 GYMAP 599
Y AP
Sbjct: 176 WYRAP 180
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYE-GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G V A R+ + VAVK+ D++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH-------F 543
+ + L LEY G L F R+ +I + A + H +
Sbjct: 74 RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+AP
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQ--YEGAFKSFDIECDMMKRIR 482
AT+ + IG G +VYKAR G VA+K + EG S E +++R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 483 ---HRNLIKIISSCS----NDDFKA-LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
H N+++++ C+ + + K LV E++ + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 576
L++LH I+H DLKP N+L+ L+DFG+A+
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 444 VYKARIQDGIEVAVKVFDLQYEGA-FKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALV 502
VY+ R + I+VA+KV E A + E +M ++ + ++++I C + LV
Sbjct: 356 VYRMRKKQ-IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLV 413
Query: 503 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLD 562
+E G L K L + + ++ V+ ++YL +H +L NVLL
Sbjct: 414 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLV 470
Query: 563 DNMVAHLSDFGMAKPLLKEDQSLT 586
+ A +SDFG++K L +D T
Sbjct: 471 NRHYAKISDFGLSKALGADDSYYT 494
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 597
LE +H + I+H DLKP N L+ D M+ L DFG+A + + S+ + + T+ YM
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 598 AP 599
P
Sbjct: 177 PP 178
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 181 KLSGFVPACFGNLTSLRNLYLGSNQLTSIP-STLWNLKYILYLNLSSNSFTGPLPLEI-G 238
K+ + + F + T L L L N++ I + W L ++L LNLS N F G + +
Sbjct: 286 KIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQN-FLGSIDSRMFE 344
Query: 239 NLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSI-GGLIDLKSLDLS 297
NL L +DLS N+ + L +L+ L L+ N+L+ S+PD I L L+ + L
Sbjct: 345 NLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLH 403
Query: 298 NNNISGAIP 306
N + P
Sbjct: 404 TNPWDCSCP 412
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Query: 20 SKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSSTPKLNFLSSLSNCKYLKYLS 79
+ L +L L N N F L +L +L+L+ N+L S ++ N L+ L
Sbjct: 299 TDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRM-----FENLDKLEVLD 353
Query: 80 FSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEI-SNLTNLTTIYLGGNKLNGSI 138
S N + + ++ L E+ + N S+P+ I LT+L I+L N + S
Sbjct: 354 LSYNHIRALGDQSFLGLPNLKEL--ALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411
Query: 139 P 139
P
Sbjct: 412 P 412
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQ--YEGAFKSFDIECDMMKRIR 482
AT+ + IG G +VYKAR G VA+K + EG S E +++R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 483 ---HRNLIKIISSCS----NDDFK-ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
H N+++++ C+ + + K LV E++ + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 576
L++LH I+H DLKP N+L+ L+DFG+A+
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 472 DIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIM 531
+ E +++K++ H +IKI + +D+ +VLE M G L + + + + +L
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YF 245
Query: 532 IDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQT 588
+ A++YLH IIH DLKP NVLL +++ + ++DFG +K L + SL +T
Sbjct: 246 YQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRT 300
Query: 589 QTLATIGYMAP 599
T Y+AP
Sbjct: 301 -LCGTPTYLAP 310
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Query: 433 NNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIR-HRNLIKII 490
++ GG A VY+A+ + G E A+K E ++ E MK++ H N+++
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92
Query: 491 SSCS-----NDDFKA--LVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVASALEYL 541
S+ S +D +A L+L + G L + L S L L I A++++
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
H PIIH DLK N+LL + L DFG A
Sbjct: 153 HR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+++D ++DFG+AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 420 HLELFQATNGFSENNLIGRGGVASVYKARIQDGI--EVAVKVFDLQYEGAFKSFDIECDM 477
H Q T+G+ IG G SV K I E AVK+ D + +I +
Sbjct: 14 HRNSIQFTDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEI---L 69
Query: 478 MKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASA 537
++ +H N+I + + + +V E G L + + + + ++ +
Sbjct: 70 LRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSE-REASAVLFTITKT 128
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDN----MVAHLSDFGMAKPLLKED 582
+EYLH + ++H DLKP+N+L D + DFG AK L E+
Sbjct: 129 VEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 597
LE +H + I+H DLKP N L+ D M+ L DFG+A + + S+ + + T+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 598 AP 599
P
Sbjct: 224 PP 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVK--VFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG+G V+KAR + G +VA+K + + + EG + E +++ ++H N++ +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 493 CSNDDFKA-----------LVLEYMPH---GSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
C KA LV ++ H G L L + L +R+ M+ + L
Sbjct: 86 CRT---KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQML--LNGL 138
Query: 539 EYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP--LLKEDQSLTQTQTLATIGY 596
Y+H I+H D+K NVL+ + V L+DFG+A+ L K Q + T+ Y
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 597 MAP 599
P
Sbjct: 196 RPP 198
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 36/181 (19%)
Query: 436 IGRGGVASVYKA--RIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRI------RHRNLI 487
+G G V A R+ + VAVK+ D++ ++ D ++ K I H N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINAMLNHENVV 68
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL--NIMIDVASALEYLH--- 542
K + + L LEY G L F R+ +I + A + H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLM 115
Query: 543 ----FGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
+ + + I H D+KP N+LLD+ +SDFG+A ++ + T+ Y+A
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 599 P 599
P
Sbjct: 176 P 176
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 23/137 (16%)
Query: 472 DIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSL------EKCLYSSNYILDIF 525
+ E +++K++ H +IKI + +D+ +VLE M G L K L + L +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 526 QRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKED 582
Q L A++YLH IIH DLKP NVLL +++ + ++DFG +K L +
Sbjct: 121 QML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GE 168
Query: 583 QSLTQTQTLATIGYMAP 599
SL +T T Y+AP
Sbjct: 169 TSLMRT-LCGTPTYLAP 184
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 465 EGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSL-----EKCLYSSN 519
+G S + E ++++I+H N++ + + + LV++ + G L EK Y+
Sbjct: 61 KGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK 120
Query: 520 YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAK 576
+ ++ V A+ YLH + I+H DLKP N+L D+ +SDFG++K
Sbjct: 121 DASTLIRQ------VLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171
Query: 577 PLLKEDQSLTQTQTLATIGYMAP 599
K D + T GY+AP
Sbjct: 172 MEGKGD---VMSTACGTPGYVAP 191
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+++D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 597
LE +H + I+H DLKP N L+ D M+ L DFG+A + + S+ + + T+ YM
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 598 AP 599
P
Sbjct: 180 PP 181
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 178 GGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILY-----------LNLSS 226
N++ F P CF + L L+L + QL PS L L LS+
Sbjct: 184 SSNQIKEFSPGCFHAIGRLFGLFLNNVQLG--PSLTEKLCLELANTSIRNLSLSNSQLST 241
Query: 227 NSFTGPLPLEIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIG 286
S T L L+ NL +L DLS NN + + L L+Y FLEYN +Q S+
Sbjct: 242 TSNTTFLGLKWTNLTML---DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLH 298
Query: 287 GLIDLKSLDLSNNNISGAIPI-SLEKLLDLKY 317
GL +++ L+L + +I + SL K+ D +
Sbjct: 299 GLFNVRYLNLKRSFTKQSISLASLPKIDDFSF 330
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 23/137 (16%)
Query: 472 DIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSL------EKCLYSSNYILDIF 525
+ E +++K++ H +IKI + +D+ +VLE M G L K L + L +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 526 QRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKED 582
Q L A++YLH IIH DLKP NVLL +++ + ++DFG +K L +
Sbjct: 122 QML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GE 169
Query: 583 QSLTQTQTLATIGYMAP 599
SL +T T Y+AP
Sbjct: 170 TSLMRT-LCGTPTYLAP 185
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 23/137 (16%)
Query: 472 DIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSL------EKCLYSSNYILDIF 525
+ E +++K++ H +IKI + +D+ +VLE M G L K L + L +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 526 QRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKED 582
Q L A++YLH IIH DLKP NVLL +++ + ++DFG +K L +
Sbjct: 122 QML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GE 169
Query: 583 QSLTQTQTLATIGYMAP 599
SL +T T Y+AP
Sbjct: 170 TSLMRT-LCGTPTYLAP 185
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 597
LE +H + I+H DLKP N L+ D M+ L DFG+A + + S+ + + T+ YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 598 AP 599
P
Sbjct: 196 PP 197
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 23/137 (16%)
Query: 472 DIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSL------EKCLYSSNYILDIF 525
+ E +++K++ H +IKI + +D+ +VLE M G L K L + L +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 526 QRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKED 582
Q L A++YLH IIH DLKP NVLL +++ + ++DFG +K L +
Sbjct: 128 QML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GE 175
Query: 583 QSLTQTQTLATIGYMAP 599
SL +T T Y+AP
Sbjct: 176 TSLMRT-LCGTPTYLAP 191
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVK--VFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISS 492
IG+G V+KAR + G +VA+K + + + EG + E +++ ++H N++ +I
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 493 CSNDDFKA-----------LVLEYMPH---GSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
C KA LV ++ H G L L + L +R+ M+ + L
Sbjct: 85 CRT---KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQML--LNGL 137
Query: 539 EYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP--LLKEDQSLTQTQTLATIGY 596
Y+H I+H D+K NVL+ + V L+DFG+A+ L K Q + T+ Y
Sbjct: 138 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 597 MAP 599
P
Sbjct: 195 RPP 197
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 597
LE +H + I+H DLKP N L+ D M+ L DFG+A + + S+ + + T+ YM
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 598 AP 599
P
Sbjct: 176 PP 177
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 23/137 (16%)
Query: 472 DIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSL------EKCLYSSNYILDIF 525
+ E +++K++ H +IKI + +D+ +VLE M G L K L + L +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 526 QRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKED 582
Q L A++YLH IIH DLKP NVLL +++ + ++DFG +K L +
Sbjct: 122 QML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GE 169
Query: 583 QSLTQTQTLATIGYMAP 599
SL +T T Y+AP
Sbjct: 170 TSLMRT-LCGTPTYLAP 185
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 17/176 (9%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEV-AVKVFDLQYEGAFKSF-DIECDMMKRIRHRNLI 487
F++ + IG+G VYK EV A+K+ DL+ E ++ + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 488 KIISSCSNDDFKALVLEYMPHGS----LEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
+ S +++EY+ GS L+ YI I + ++ L+YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR------EILKGLDYLH- 133
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S IH D+K NVLL + L+DFG+A L D + + + T +MAP
Sbjct: 134 --SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAP 185
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+++D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 178 GGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILY-----------LNLSS 226
N++ F P CF + L L+L + QL PS L L LS+
Sbjct: 179 SSNQIKEFSPGCFHAIGRLFGLFLNNVQLG--PSLTEKLCLELANTSIRNLSLSNSQLST 236
Query: 227 NSFTGPLPLEIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIG 286
S T L L+ NL +L DLS NN + + L L+Y FLEYN +Q S+
Sbjct: 237 TSNTTFLGLKWTNLTML---DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLH 293
Query: 287 GLIDLKSLDLSNNNISGAIPI-SLEKLLDLKY 317
GL +++ L+L + +I + SL K+ D +
Sbjct: 294 GLFNVRYLNLKRSFTKQSISLASLPKIDDFSF 325
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 597
LE +H + I+H DLKP N L+ D M+ L DFG+A + + S+ + + T+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 598 AP 599
P
Sbjct: 224 PP 225
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 25/170 (14%)
Query: 178 GGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILY-----------LNLSS 226
N++ F P CF + L L+L + QL PS L L LS+
Sbjct: 189 SSNQIKEFSPGCFHAIGRLFGLFLNNVQLG--PSLTEKLCLELANTSIRNLSLSNSQLST 246
Query: 227 NSFTGPLPLEIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIG 286
S T L L+ NL +L DLS NN + + L L+Y FLEYN +Q S+
Sbjct: 247 TSNTTFLGLKWTNLTML---DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLH 303
Query: 287 GLIDLKSLDLSNNNISGAIPI-SLEKLLD--------LKYINVSFNKLEG 327
GL +++ L+L + +I + SL K+ D L+++N+ N + G
Sbjct: 304 GLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 353
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 27/183 (14%)
Query: 434 NLIGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDIE--------CDMMKRIRHR 484
+IG+G + V + + G + AVK+ D+ + E C M+K H
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK---HP 86
Query: 485 NLIKIISSCSNDDFKALVLEYMPHGSLEKCL-----YSSNYILDIFQRLNIMIDVASALE 539
++++++ + S+D +V E+M L C + ++ + M + AL
Sbjct: 87 HIVELLETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 540 YLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 596
Y H IIH D+KP NVLL +++ L DFG+A L + L + T +
Sbjct: 145 YCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGGRVGTPHF 199
Query: 597 MAP 599
MAP
Sbjct: 200 MAP 202
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 39/202 (19%)
Query: 430 FSENNL-----IGRGGVASVYKARI-----QDGI-EVAVKVFD-LQYEGAFKSFDIECDM 477
F NNL +G G V +A +D + +VAVK+ + ++ E +
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 478 MKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCL---------YSSNYILDIFQR 527
M + +H N++ ++ +C++ ++ EY +G L L YS N + ++
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 528 LNIMIDVASALEYLHFGYSVP----------IIHCDLKPNNVLLDDNMVAHLSDFGMAKP 577
L S+ + LHF V IH D+ NVLL + VA + DFG+A+
Sbjct: 163 L-------SSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 215
Query: 578 LLKEDQSLTQTQTLATIGYMAP 599
++ + + + + +MAP
Sbjct: 216 IMNDSNYIVKGNARLPVKWMAP 237
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVY----KARIQDGIEVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY K ++D E V + + + + F E +MK ++++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALE 539
++ S +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N ++ ++ + DFGM + + + D + L + +M+P
Sbjct: 138 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVYKARIQDGI----EVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY+ +D I E V V + + + F E +MK ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 539
++ S +V+E M HG L+ L S + + + + + ++A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H +L N ++ + + DFGM + + + D + L + +MAP
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 402 SQLADANMPLVANLRRFTHLELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVA 456
S +A P A LR E F + ++G G +VYK I +G I VA
Sbjct: 2 SHMASGEAPNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA 54
Query: 457 VKVF-DLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCL 515
+K + A K E +M + + ++ +++ C + L+ + MP G L +
Sbjct: 55 IKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV 113
Query: 516 YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 575
+ LN + +A + YL ++H DL NVL+ ++DFG+A
Sbjct: 114 REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLA 170
Query: 576 KPLLKEDQSLTQTQTLATIGYMA 598
K L E++ I +MA
Sbjct: 171 KLLGAEEKEYHAEGGKVPIKWMA 193
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVYKARIQDGI----EVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY+ +D I E V V + + + F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 539
++ S +V+E M HG L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H +L N ++ + + DFGM + + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVY----KARIQDGIEVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY K ++D E V + + + + F E +MK ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALE 539
++ S +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N ++ ++ + DFGM + + + D + L + +M+P
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 78
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 79 AFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 133
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEY 189
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 190 VATRWYRAP 198
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Query: 427 TNGFSENNLIGRGGVAS----VYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIR 482
++G+ IG G + V+KA +E AVKV D + +I +++ +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVIDKSKRDPSEEIEI---LLRYGQ 79
Query: 483 HRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH 542
H N+I + + LV E M G L + + + ++ + +EYLH
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTIGKTVEYLH 138
Query: 543 FGYSVPIIHCDLKPNNVLLDDN----MVAHLSDFGMAKPLLKED 582
S ++H DLKP+N+L D + DFG AK L E+
Sbjct: 139 ---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Query: 178 GGNKLSGFVPACFGNLTSLRNLYLGSNQLTS--IPSTLWNLK--YILYLNLSSNSFTGPL 233
N L F P CF + L L L + QL W L I L+L++N
Sbjct: 179 SSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATS 238
Query: 234 PLEIGNLRV--LVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDL 291
L+ L Q+DLS NN + L L+YL LEYN +Q P S GL +L
Sbjct: 239 ESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNL 298
Query: 292 KSLDL 296
+ L L
Sbjct: 299 RYLSL 303
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 121/313 (38%), Gaps = 72/313 (23%)
Query: 14 SFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSS-------------- 59
+F+F + L+ L+L NS + N F N +NL +L L++N L+S+
Sbjct: 92 TFVF-CTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQEL 150
Query: 60 -----------TPKLNFLSSLSNCKYLKYLSFSNNSLDGILP---RAIGNLSQSMEVFFM 105
+ +L FL + S L+ L S+N L P + IG L +
Sbjct: 151 LLAKNKILALRSEELEFLGNSS----LRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQ 206
Query: 106 FNCNISGSIPEEISNLTNLTTIYLGGNKLNGSIPIAXXXXXXXXXXXXEDNQLEGSIPXX 165
N +++ + E+SN T++ + L N+L +A QL+ S
Sbjct: 207 LNPHLTEKLCWELSN-TSIQNLSLANNQL-----LATSESTFSGLKWTNLTQLDLSY--- 257
Query: 166 XXXXXXXXXXXXGGNKLSGFVPACFGNLTSLRNLYLGSNQLTSI-PSTLWNLKYILYLNL 224
N L F L SLR L L N + + P + + L + YL+L
Sbjct: 258 --------------NNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSL 303
Query: 225 SSNSFTGPLPLEIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDS 284
R + +S+ + + LK L+YL ++ N + + ++
Sbjct: 304 K---------------RAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNT 348
Query: 285 IGGLIDLKSLDLS 297
GL+ LK L LS
Sbjct: 349 FTGLVSLKYLSLS 361
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Query: 236 EIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGS--IPDSIGGLIDLKS 293
E LR + +I LS N + ++ + LQ L L L+ P L +L
Sbjct: 425 EWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTI 484
Query: 294 LDLSNNNISGAIPISLEKLLDLKYINVSFNKLEGEIPREGP 334
LDLSNNNI+ LE L +L+ ++ N L R P
Sbjct: 485 LDLSNNNIANINEDLLEGLENLEILDFQHNNLARLWKRANP 525
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 138/343 (40%), Gaps = 57/343 (16%)
Query: 20 SKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSSTPKLNFLSSLSNCKYLKY-L 78
+ L++L+L N+ + +F L +L+ LSL YN + +P+ + LSN +YL
Sbjct: 248 TNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFY--GLSNLRYLSLKR 305
Query: 79 SFSNNSLDGILPRAIGNLS----QSMEVFFMFNCNISGSIPEEISNLTNLTTIYLGGNKL 134
+F+ S+ I + S + +E M + NI + + L +L YL +K
Sbjct: 306 AFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLK--YLSLSKT 363
Query: 135 NGSIPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKLSGFVPACFGNLT 194
S+ Q + N +S F L
Sbjct: 364 FTSL------------------QTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFSWLG 405
Query: 195 SLRNLYLGSNQL-TSIPSTLWN---------LKYILYLNLSSNSFTGPLPLEIGNLR--V 242
LR L LG N++ + W L Y YL LS++SF L+ LR
Sbjct: 406 QLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVA 465
Query: 243 LVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLSNNNIS 302
L +D+S P+ L++L L L N + D + GL +L+ LD +NN++
Sbjct: 466 LKNVDIS--------PSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNLA 517
Query: 303 GAI-------PIS-LEKLLDLKYINVSFNKLEGEIPREGPFRN 337
P++ L+ L L +N+ N L+ EIP G F+N
Sbjct: 518 RLWKRANPGGPVNFLKGLSHLHILNLESNGLD-EIPV-GVFKN 558
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+++D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 501 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI-DVASALEYLHFGYSVPIIHCDLKPNNV 559
L+L+Y+ G L L + + I + ++ ALE+LH + II+ D+K N+
Sbjct: 136 LILDYINGGELFTHLSQRERFTE--HEVQIYVGEIVLALEHLH---KLGIIYRDIKLENI 190
Query: 560 LLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LLD N L+DFG++K + D++ TI YMAP
Sbjct: 191 LLDSNGHVVLTDFGLSKEFVA-DETERAYDFCGTIEYMAP 229
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E + + +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +VLEY P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 436 IGRGGVASVYKARIQDGIE-VAVKVFDLQYE--GAFKSFDIECDMMKRIRHRNLIKIISS 492
+G G VYKA E VA+K L++E G + E ++K ++HRN+I++ S
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
++ L+ EY L+K + + D+ R+ I + + ++F +S +H
Sbjct: 102 IHHNHRLHLIFEYA-ENDLKKYMDKNP---DVSMRV-IKSFLYQLINGVNFCHSRRCLHR 156
Query: 553 DLKPNNVLL-----DDNMVAHLSDFGMAK 576
DLKP N+LL + V + DFG+A+
Sbjct: 157 DLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
IG G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 148
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAP 196
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV + ++ G+++AVK ++ A +++ E ++K ++H N+I ++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 117
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 172
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 173 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 220
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 20/189 (10%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKARIQ-DGIEVAVK-VFDLQYEGAFKSFDIECDMMK 479
++F ++ + IG G V A + + VA+K + +++ + E ++
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 78
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSN-YILDIFQRLN------IMI 532
RH N+I I ND +A +E M + + L ++ Y L Q L+ +
Sbjct: 79 AFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 133
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ--TQT 590
+ L+Y+H S ++H DLKP+N+LL+ + DFG+A+ + D T T+
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLAR-VADPDHDHTGFLTEY 189
Query: 591 LATIGYMAP 599
+AT Y AP
Sbjct: 190 VATRWYRAP 198
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 150
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAP 198
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 150
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAP 198
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 150
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAP 198
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + A K E
Sbjct: 13 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 131 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 187
Query: 595 GYMA 598
+MA
Sbjct: 188 KWMA 191
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 595 GYMA 598
+MA
Sbjct: 186 KWMA 189
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 436 IGRGGVASV----YKARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
IG G V Y + + VA+K + + + F E M++ H +++K+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
+ + +++E G L L Y LD+ + +++AL YL S +
Sbjct: 106 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 161
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H D+ NVL+ N L DFG+++ +++ ++ I +MAP
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAP 209
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAF-----KSFDIE 474
L + + T F + ++G G +VYK I +G +V + V ++ A K E
Sbjct: 43 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDE 101
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 102 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 160
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 161 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 217
Query: 595 GYMA 598
+MA
Sbjct: 218 KWMA 221
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 595 GYMA 598
+MA
Sbjct: 187 KWMA 190
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATRWYRAP 191
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 10/175 (5%)
Query: 430 FSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIECDMMKRIRH 483
F + ++G G +VYK I +G I VA+K + A K E +M + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
++ +++ C + L+++ MP G L + + LN + +A + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 135
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
++H DL NVL+ ++DFG+AK L E++ I +MA
Sbjct: 136 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 595 GYMA 598
+MA
Sbjct: 184 KWMA 187
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 24/183 (13%)
Query: 432 ENNLIGRGGVASVYKARIQDGI------EVAVKVFDLQYEGAFKSFDIECDMMKRIR-HR 484
+ +++G G AR+Q I E AVK+ + Q E +M+ + + HR
Sbjct: 17 QEDVLGEGA-----HARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHR 71
Query: 485 NLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG 544
N++++I +D LV E M GS+ ++ + ++ + ++ DVASAL++LH
Sbjct: 72 NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLH-- 128
Query: 545 YSVPIIHCDLKPNNVLLDD-NMVA--HLSDFGMAKPL-LKEDQSLTQTQTLAT----IGY 596
+ I H DLKP N+L + N V+ + DF + + L D S T L T Y
Sbjct: 129 -NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 597 MAP 599
MAP
Sbjct: 188 MAP 190
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 154
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 155 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAP 202
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 148
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAP 196
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + A K E
Sbjct: 10 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 127
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 128 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 595 GYMA 598
+MA
Sbjct: 185 KWMA 188
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 436 IGRGGVASV----YKARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
IG G V Y + + VA+K + + + F E M++ H +++K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
+ + +++E G L L Y LD+ + +++AL YL S +
Sbjct: 83 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 138
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H D+ NVL+ N L DFG+++ +++ ++ I +MAP
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAP 186
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 86
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 141
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 142 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 189
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L K+ S ++ +V+EY P G + L + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+++D ++DFG AK + L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+++D ++DFG AK + L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 436 IGRGGVASV----YKARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
IG G V Y + + VA+K + + + F E M++ H +++K+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
+ + +++E G L L Y LD+ + +++AL YL S +
Sbjct: 81 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 136
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H D+ NVL+ N L DFG+++ +++ ++ I +MAP
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAP 184
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 10/174 (5%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEV-AVKVFD---LQYEGAFKSFDIECDMMKRIRHRN 485
+ +G+GG A Y+ D EV A KV L + E + K + + +
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 87
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
++ +DDF +VLE SL + + + R M ++YLH
Sbjct: 88 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNNR 146
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+IH DLK N+ L+D+M + DFG+A + E + T Y+AP
Sbjct: 147 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAP 195
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 29/164 (17%)
Query: 178 GGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPLEI 237
GGNKL + LT+L L L NQL S+P+ +++ ++
Sbjct: 71 GGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFD--------------------KL 108
Query: 238 GNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSI-GGLIDLKSLDL 296
NL+ LV ++ N L +L YL+L +N+LQ S+P + L +L LDL
Sbjct: 109 TNLKELVLVE---NQLQSLPDGVFDKLTNLTYLYLYHNQLQ-SLPKGVFDKLTNLTRLDL 164
Query: 297 SNNNISGAIPISLEKLLDLKYINVSFNKLEGEIPREGPFRNFSA 340
NN + +KL LK ++++ N+L+ +P +G F ++
Sbjct: 165 DNNQLQSLPEGVFDKLTQLKQLSLNDNQLKS-VP-DGVFDRLTS 206
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 11 TIPSFIFNA-SKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTS 58
++P +F+ + L+RL+L+ N F L LK+LSLN N L S
Sbjct: 147 SLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKS 195
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 433 NNLIGRGGVASVYKARIQDGIEV-AVKVFDLQYEGAFKSFDIECDMM-KRI-----RHRN 485
+ ++G+G V+ A + + A+K L+ + D+EC M+ KR+ H
Sbjct: 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLAWEHPF 79
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
L + + + V+EY+ G L + S + D+ + ++ L++LH
Sbjct: 80 LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLH--- 135
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S I++ DLK +N+LLD + ++DFGM K + D T Y+AP
Sbjct: 136 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCGTPDYIAP 187
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVY----KARIQDGIEVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY K ++D E V + + + + F E +MK ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALE 539
++ S +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N ++ ++ + DFGM + + + D + L + +M+P
Sbjct: 140 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 139
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 187
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + S D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+ + E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-----MTGYVATRWYRAP 191
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 436 IGRGGVASV----YKARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
IG G V Y + + VA+K + + + F E M++ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
+ + +++E G L L Y LD+ + +++AL YL S +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H D+ NVL+ N L DFG+++ +++ ++ I +MAP
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAP 181
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIIS- 491
+G G SV A + G+ VAVK ++ K E ++K ++H N+I ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 492 ---SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 141
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 188
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIIS- 491
+G G SV A + G+ VAVK ++ K E ++K ++H N+I ++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 492 ---SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 163
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 210
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 155
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 203
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 155
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 203
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 473 IECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGS-LEKCLYSSNYILDIFQRLN-- 529
+E ++ R+ H N+IK++ N F LV+E HGS L+ L++ +D RL+
Sbjct: 78 LEIAILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLD--LFA---FIDRHPRLDEP 130
Query: 530 ----IMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSL 585
I + SA+ YL IIH D+K N+++ ++ L DFG A L E L
Sbjct: 131 LASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL--ERGKL 185
Query: 586 TQTQTLATIGYMAP 599
T TI Y AP
Sbjct: 186 FYT-FCGTIEYCAP 198
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 145
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 193
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 436 IGRGGVASV----YKARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
IG G V Y + + VA+K + + + F E M++ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
+ + +++E G L L Y LD+ + +++AL YL S +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H D+ NVL+ N L DFG+++ +++ ++ I +MAP
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAP 181
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIIS- 491
+G G SV A + G+ VAVK ++ K E ++K ++H N+I ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 492 ---SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 164
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 211
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 145
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 193
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 436 IGRGGVASV----YKARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
IG G V Y + + VA+K + + + F E M++ H +++K+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
+ + +++E G L L Y LD+ + +++AL YL S +
Sbjct: 80 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 135
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H D+ NVL+ N L DFG+++ +++ ++ I +MAP
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAP 183
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 145
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 146 ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAP 193
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 166
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 214
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 154
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 155 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 202
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 75/180 (41%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVYKARIQDGI----EVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY+ +D I E V V + + + F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVASALE 539
++ S +V+E M HG L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N ++ + + DFGM + + + + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 140
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 188
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 148
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 196
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 87
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 142
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 143 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 190
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 145
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 193
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 149
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 150 ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAP 197
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 84/198 (42%), Gaps = 19/198 (9%)
Query: 418 FTHLELFQATNGFSENNLIGRGGVASVY----KARIQDGIEVAVKVFDLQYEGAFKS--- 470
F E A + + +G+G VY K ++D E V + + + +
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 471 FDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYS------SNYIL-- 522
F E +MK ++++++ S +++E M G L+ L S +N +L
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 523 -DIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKE 581
+ + + + ++A + YL+ + +H DL N ++ ++ + DFGM + + +
Sbjct: 126 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 182
Query: 582 DQSLTQTQTLATIGYMAP 599
D + L + +M+P
Sbjct: 183 DYYRKGGKGLLPVRWMSP 200
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 155
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 203
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 149
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 197
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 597
LE +H + I+H DLKP N L+ D M+ L DFG+A + + S+ + + + YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 598 AP 599
P
Sbjct: 224 PP 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIIS- 491
+G G SV A + G+ VAVK ++ K E ++K ++H N+I ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 492 ---SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 149
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 196
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYM 597
LE +H + I+H DLKP N L+ D M+ L DFG+A + + + + + T+ YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 598 AP 599
P
Sbjct: 196 PP 197
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 150
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 198
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 436 IGRGGVASV----YKARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
IG G V Y + + VA+K + + + F E M++ H +++K+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
+ + +++E G L L Y LD+ + +++AL YL S +
Sbjct: 75 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 130
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H D+ NVL+ N L DFG+++ +++ ++ I +MAP
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAP 178
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 145
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D+ ++DFG AK + L T Y+AP
Sbjct: 146 --SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 194
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVY----KARIQDGIEVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY K ++D E V + + + + F E +MK ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALE 539
++ S +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N ++ ++ + DFGM + + + D + L + +M+P
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 10/174 (5%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEV-AVKVFD---LQYEGAFKSFDIECDMMKRIRHRN 485
+ +G+GG A Y+ D EV A KV L + E + K + + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
++ +DDF +VLE SL + + + R M ++YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNNR 162
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+IH DLK N+ L+D+M + DFG+A + E + T Y+AP
Sbjct: 163 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAP 211
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 19/186 (10%)
Query: 428 NGFSENNLIGRGGVASVYKARIQDGIE-VAVKVFDLQY-EGAFKSFDIECDMMKRIRHRN 485
+ + +IG G A V A E VA+K +L+ + + E M + H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSL--------EKCLYSSNYILDIFQRLNIMIDVASA 537
++ +S D LV++ + GS+ K + S +LD I+ +V
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG-VLDESTIATILREVLEG 128
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT----LAT 593
LEYLH IH D+K N+LL ++ ++DFG++ L +T+ + + T
Sbjct: 129 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVS-AFLATGGDITRNKVRKTFVGT 184
Query: 594 IGYMAP 599
+MAP
Sbjct: 185 PCWMAP 190
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 179
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 228
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVY----KARIQDGIEVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY K ++D E V + + + + F E +MK ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALE 539
++ S +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N ++ ++ + DFGM + + + D + L + +M+P
Sbjct: 146 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L K+ S ++ +V+EY P G + L + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+++D ++DFG AK + L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVY----KARIQDGIEVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY K ++D E V + + + + F E +MK ++++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALE 539
++ S +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N ++ ++ + DFGM + + + D + L + +M+P
Sbjct: 143 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 10/174 (5%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEV-AVKVFD---LQYEGAFKSFDIECDMMKRIRHRN 485
+ +G+GG A Y+ D EV A KV L + E + K + + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
++ +DDF +VLE SL + + + R M ++YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNNR 162
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+IH DLK N+ L+D+M + DFG+A + E + T Y+AP
Sbjct: 163 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKXLCGTPNYIAP 211
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVY----KARIQDGIEVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY K ++D E V + + + + F E +MK ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALE 539
++ S +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N ++ ++ + DFGM + + + D + L + +M+P
Sbjct: 146 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVY----KARIQDGIEVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY K ++D E V + + + + F E +MK ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALE 539
++ S +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N ++ ++ + DFGM + + + D + L + +M+P
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L K+ S ++ +V+EY P G + L + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+++D ++DFG AK + L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVY----KARIQDGIEVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY K ++D E V + + + + F E +MK ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALE 539
++ S +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N ++ ++ + DFGM + + + D + L + +M+P
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 10/174 (5%)
Query: 430 FSENNLIGRGGVASVYKARIQDGIEV-AVKVFD---LQYEGAFKSFDIECDMMKRIRHRN 485
+ +G+GG A Y+ D EV A KV L + E + K + + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
++ +DDF +VLE SL + + + R M ++YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNNR 162
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+IH DLK N+ L+D+M + DFG+A + E + T Y+AP
Sbjct: 163 ---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKTLCGTPNYIAP 211
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVK-VFDLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + + A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG AK L E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 595 GYMA 598
+MA
Sbjct: 186 KWMA 189
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
VA +E+L S IH DL N+LL +N V + DFG+A+ + K + + T
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 594 IGYMAP 599
+ +MAP
Sbjct: 265 LKWMAP 270
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G E A K + + + + E ++++ IRH N+I
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + + + + + + YLH S
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHYLH---SKR 135
Query: 549 IIHCDLKPNNVLLDDNMVAH----LSDFGMAKPL 578
I H DLKP N++L D V + L DFG+A +
Sbjct: 136 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 169
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + +L T Y+AP
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC-----GTPEYLAP 228
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 26/157 (16%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIR----------HR 484
+G+G V+K+ + G VAVK F +F D + R H
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVK-------KIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 485 NLIKIIS--SCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH 542
N++ +++ ND LV +YM L + ++ IL+ + ++ + ++YLH
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYM-ETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH 126
Query: 543 FGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLL 579
G ++H D+KP+N+LL+ ++DFG+++ +
Sbjct: 127 SG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Query: 469 KSFDIECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRL 528
+ + E ++++ IRH N+I + N L+LE + G L L + + +
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EAT 132
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAH----LSDFGMAKPL 578
+ + + YLH S I H DLKP N++L D V + L DFG+A +
Sbjct: 133 QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 183
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 153
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 154 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 202
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG AK L E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 595 GYMA 598
+MA
Sbjct: 186 KWMA 189
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 38/205 (18%)
Query: 430 FSENNL-----IGRGGVASVYKARI-----QDGI-EVAVKVFD-LQYEGAFKSFDIECDM 477
F NNL +G G V +A +D + +VAVK+ + ++ E +
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 478 MKRI-RHRNLIKIISSCSNDDFKALVLEYMPHGSL----------------------EKC 514
M + +H N++ ++ +C++ ++ EY +G L E
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL 147
Query: 515 LYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGM 574
L++ L+ VA + +L S IH D+ NVLL + VA + DFG+
Sbjct: 148 DKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 575 AKPLLKEDQSLTQTQTLATIGYMAP 599
A+ ++ + + + + +MAP
Sbjct: 205 ARDIMNDSNYIVKGNARLPVKWMAP 229
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G E A K + + + + E ++++ IRH N+I
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + + + + + + YLH S
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHYLH---SKR 128
Query: 549 IIHCDLKPNNVLLDDNMVAH----LSDFGMAKPL 578
I H DLKP N++L D V + L DFG+A +
Sbjct: 129 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 82/173 (47%), Gaps = 14/173 (8%)
Query: 434 NLIGRGGVASVYKARIQDGIEV-AVKV---FDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+IGRG V ++++ +V A+K+ +++ F E D++ + + +
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 490 ISSCSNDDFKALVLEYMPHGSLEKCLYS-SNYILDIFQR--LNIMIDVASALEYLHFGYS 546
+ +D+ LV++Y G L L + + + R L M+ ++ LH+
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY--- 196
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+H D+KP+N+L+D N L+DFG L+ ED ++ + + T Y++P
Sbjct: 197 ---VHRDIKPDNILMDMNGHIRLADFGSCLKLM-EDGTVQSSVAVGTPDYISP 245
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 149
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 197
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 10/175 (5%)
Query: 430 FSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIECDMMKRIRH 483
F + ++G G +VYK I +G I VA+K + A K E +M + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
++ +++ C + L+ + MP G L + + LN + +A + YL
Sbjct: 102 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 159
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
++H DL NVL+ ++DFG+AK L E++ I +MA
Sbjct: 160 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 212
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + A K E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 595 GYMA 598
+MA
Sbjct: 191 KWMA 194
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 595 GYMA 598
+MA
Sbjct: 186 KWMA 189
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 19/186 (10%)
Query: 428 NGFSENNLIGRGGVASVYKARIQDGIE-VAVKVFDLQY-EGAFKSFDIECDMMKRIRHRN 485
+ + +IG G A V A E VA+K +L+ + + E M + H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSL--------EKCLYSSNYILDIFQRLNIMIDVASA 537
++ +S D LV++ + GS+ K + S +LD I+ +V
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG-VLDESTIATILREVLEG 133
Query: 538 LEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT----LAT 593
LEYLH IH D+K N+LL ++ ++DFG++ L +T+ + + T
Sbjct: 134 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVS-AFLATGGDITRNKVRKTFVGT 189
Query: 594 IGYMAP 599
+MAP
Sbjct: 190 PCWMAP 195
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA-----GTPEYLAP 207
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 595 GYMA 598
+MA
Sbjct: 187 KWMA 190
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 595 GYMA 598
+MA
Sbjct: 187 KWMA 190
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 528 LNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLT- 586
L+I + +A A+E+LH S ++H DLKP+N+ + V + DFG+ + ++++ T
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 587 ---------QTQTLATIGYMAP 599
T + T YM+P
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSP 199
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGA--FKSFDIECDMMKRIRHRNLIKIISS 492
+G+G + V + ++ G E A + + + A + + E + + ++H N++++ S
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 493 CSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHC 552
S + L+ + + G L + + + Y + + + LE + + + ++H
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLHCHQMGVVHR 134
Query: 553 DLKPNNVLLDDNM---VAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+LKP N+LL + L+DFG+A + E Q+ T GY++P
Sbjct: 135 NLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSP 182
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + A K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 595 GYMA 598
+MA
Sbjct: 187 KWMA 190
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVK-VFDLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + + A K E
Sbjct: 13 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG AK L E++ I
Sbjct: 131 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 187
Query: 595 GYMA 598
+MA
Sbjct: 188 KWMA 191
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G GG + V + DG A+K + + E DM + H N++++++ C
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 495 ND----DFKALVLEYMPHGSL----EKCLYSSNYILDIFQRLNIMIDVASALEYLHF-GY 545
+ L+L + G+L E+ N++ + Q L +++ + LE +H GY
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTED-QILWLLLGICRGLEAIHAKGY 155
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTL-------ATIGYMA 598
+ H DLKP N+LL D L D G + Q TL TI Y A
Sbjct: 156 A----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 599 P 599
P
Sbjct: 212 P 212
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 436 IGRGGVASV----YKARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
IG G V Y + + VA+K + + + F E M++ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
+ + +++E G L L + LD+ + +++AL YL S +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H D+ NVL+ N L DFG+++ +++ ++ I +MAP
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKWMAP 181
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 595 GYMA 598
+MA
Sbjct: 184 KWMA 187
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 21/192 (10%)
Query: 423 LFQATNGFSENNLIGRGGVASVYKARIQDGIE-VAVKVFDLQYEGAFKSFDI-ECDMMKR 480
++ ++ F +L+G G V A + E VA+K + + F + E ++K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 481 IRHRNLIKIISSCSNDDFK----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVAS 536
+H N+I I + D F+ +++ + L + + + D Q +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF--IYQTLR 123
Query: 537 ALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKED---------QSLTQ 587
A++ LH G +V IH DLKP+N+L++ N + DFG+A+ ++ E Q
Sbjct: 124 AVKVLH-GSNV--IHRDLKPSNLLINSNCDLKVCDFGLAR-IIDESAADNSEPTGQQSGM 179
Query: 588 TQTLATIGYMAP 599
T+ +AT Y AP
Sbjct: 180 TEXVATRWYRAP 191
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX-----GTPEYLAP 207
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 10/175 (5%)
Query: 430 FSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIECDMMKRIRH 483
F + ++G G +VYK I +G I VA+K + A K E +M + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
++ +++ C + L+ + MP G L + + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 134
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
++H DL NVL+ ++DFG+AK L E++ I +MA
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 10/175 (5%)
Query: 430 FSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIECDMMKRIRH 483
F + ++G G +VYK I +G I VA+K + A K E +M + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
++ +++ C + L+ + MP G L + + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 134
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
++H DL NVL+ ++DFG+AK L E++ I +MA
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + A K E
Sbjct: 6 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 64
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 65 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 123
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 124 AEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 180
Query: 595 GYMA 598
+MA
Sbjct: 181 KWMA 184
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT 588
+ + + AL YL + V IH D+KP+N+LLD+ L DFG++ L+ + +
Sbjct: 128 KMTVAIVKALYYLKEKHGV--IHRDVKPSNILLDERGQIKLCDFGISGRLVDDK---AKD 182
Query: 589 QTLATIGYMAP 599
++ YMAP
Sbjct: 183 RSAGCAAYMAP 193
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 20/188 (10%)
Query: 426 ATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFK-----SFDIECDMMK 479
AT+ + IG G +VYKAR G VA+K + G S E +++
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 480 RIR---HRNLIKIISSCS----NDDFKA-LVLEYMPHGSLEKCLYSSNYILDIFQRLNIM 531
R+ H N+++++ C+ + + K LV E++ + L ++M
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 532 IDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTL 591
L++LH I+H DLKP N+L+ L+DFG+A+ + T +
Sbjct: 127 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALTPVV 180
Query: 592 ATIGYMAP 599
T+ Y AP
Sbjct: 181 VTLWYRAP 188
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G++ A K + + + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + + + + + + + YLH S+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 549 IIHCDLKPNNVLLDDNMVA----HLSDFGMAKPL 578
I H DLKP N++L D V + DFG+A +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT 588
I + + ALE+LH SV IH D+KP+NVL++ + DFG++ L+ S+ +T
Sbjct: 157 KIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQVKMCDFGISGYLV---DSVAKT 211
Query: 589 QTLATIGYMAP 599
YMAP
Sbjct: 212 IDAGCKPYMAP 222
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 427 TNGFSENNLIGRGGVASVY--KARIQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
++ + ++G+G V K +I G E AVKV ++ + +S E ++K++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
H N++K+ + + LV E G L + S ++ I+ V S + Y+
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 148
Query: 542 HFGYSVPIIHCDLKPNNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
H I+H DLKP N+LL+ + + DFG++ + S + T Y+A
Sbjct: 149 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIA 202
Query: 599 P 599
P
Sbjct: 203 P 203
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + A K E
Sbjct: 19 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 77
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 78 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 136
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 137 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 193
Query: 595 GYMA 598
+MA
Sbjct: 194 KWMA 197
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G++ A K + + + + E ++K I+H N+I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + + + + + + + YLH S+
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 133
Query: 549 IIHCDLKPNNVLLDDNMVA----HLSDFGMAKPL 578
I H DLKP N++L D V + DFG+A +
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G++ A K + + + + E ++K I+H N+I
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + + + + + + + YLH S+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 549 IIHCDLKPNNVLLDDNMVA----HLSDFGMA 575
I H DLKP N++L D V + DFG+A
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G++ A K + + + + E ++K I+H N+I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + + + + + + + YLH S+
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 133
Query: 549 IIHCDLKPNNVLLDDNMVA----HLSDFGMAKPL 578
I H DLKP N++L D V + DFG+A +
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G++ A K + + + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + + + + + + + YLH S+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 549 IIHCDLKPNNVLLDDNMVA----HLSDFGMAKPL 578
I H DLKP N++L D V + DFG+A +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVK-VFDLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + + A K E
Sbjct: 3 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 61
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 120
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 121 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177
Query: 595 GYMA 598
+MA
Sbjct: 178 KWMA 181
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G++ A K + + + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + + + + + + + YLH S+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 549 IIHCDLKPNNVLLDDNMVA----HLSDFGMAKPL 578
I H DLKP N++L D V + DFG+A +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 528 LNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLT 586
L+I I +A A+E+LH S ++H DLKP+N+ + V + DFG+ + ++++ T
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + D+G+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G++ A K + + + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + + + + + + + YLH S+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 549 IIHCDLKPNNVLLDDNMVA----HLSDFGMAKPL 578
I H DLKP N++L D V + DFG+A +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G++ A K + + + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + + + + + + + YLH S+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 549 IIHCDLKPNNVLLDDNMVA----HLSDFGMAKPL 578
I H DLKP N++L D V + DFG+A +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G++ A K + + + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + + + + + + + YLH S+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 549 IIHCDLKPNNVLLDDNMVA----HLSDFGMAKPL 578
I H DLKP N++L D V + DFG+A +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G++ A K + + + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + + + + + + + YLH S+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 549 IIHCDLKPNNVLLDDNMVA----HLSDFGMAKPL 578
I H DLKP N++L D V + DFG+A +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G++ A K + + + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + + + + + + + YLH S+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 549 IIHCDLKPNNVLLDDNMVA----HLSDFGMAKPL 578
I H DLKP N++L D V + DFG+A +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 428 NGFSENNLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDI-ECDMMKRIRHRN 485
+ F + + +G G V+K + G+ +A K+ L+ + A ++ I E ++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFG 544
++ + +D ++ +E+M GSL++ L + I + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 545 YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ I+H D+KP+N+L++ L DFG++ L+ + T YM+P
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSP 172
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+L+D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|1G9U|A Chain A, Crystal Structure Of Yopm-leucine Rich Effector Protein
From Yersinia Pestis
pdb|1JL5|A Chain A, Novel Molecular Architecture Of Yopm-A Leucine-Rich
Effector Protein From Yersinia Pestis
Length = 454
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 136/336 (40%), Gaps = 83/336 (24%)
Query: 41 GNLRNLKRLSLNYNYLTSSTPKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIGNLSQSM 100
NL+ L L YL S +L L L N +LK + NNSL + + +L S+
Sbjct: 121 NNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSL-----KKLPDLPPSL 175
Query: 101 EVFFMFNCNISGSIPEEISNLTNLTTIYLGGNKLNG--SIPIAXXXXXXXXXXXXEDNQL 158
E F N +P E+ NL LT IY N L +P++ L
Sbjct: 176 E-FIAAGNNQLEELP-ELQNLPFLTAIYADNNSLKKLPDLPLS----------------L 217
Query: 159 EGSIPXXXXXXXXXXXXXXGGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKY 218
E + GN + +P NL L +Y +N L ++P +L+
Sbjct: 218 ESIV---------------AGNNILEELPE-LQNLPFLTTIYADNNLLKTLPDLPPSLE- 260
Query: 219 ILYLNLSSNSFTGPLPLEIGNLRVLVQIDLSMNNFSGFIPTTIGDL-KDLQYLFLEYNRL 277
LN+ N T LP E+ + L +D+S N FSG + +L +L YL N +
Sbjct: 261 --ALNVRDNYLTD-LP-ELP--QSLTFLDVSENIFSG-----LSELPPNLYYLNASSNEI 309
Query: 278 QG--SIPDSIGGLIDLKSLDLSNNNIS--GAIPISLEKLL--------------DLKYIN 319
+ +P S L+ L++SNN + A+P LE+L+ +LK ++
Sbjct: 310 RSLCDLPPS------LEELNVSNNKLIELPALPPRLERLIASFNHLAEVPELPQNLKQLH 363
Query: 320 VSFNKLEGEIPREGPFRNFSAESFKGNELLCGTPNL 355
V +N L RE P S E + N L P L
Sbjct: 364 VEYNPL-----REFPDIPESVEDLRMNSHLAEVPEL 394
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 26 ELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSSTPKLNFLSSLSNCKYLKYLSFSNNSL 85
EL+ +SF I +L+ L L + ++ + +L L L N +L + NNSL
Sbjct: 148 ELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSL 207
Query: 86 DGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLTNLTTIYLGGNKL 134
+ + +L S+E N NI +P E+ NL LTTIY N L
Sbjct: 208 -----KKLPDLPLSLESIVAGN-NILEELP-ELQNLPFLTTIYADNNLL 249
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 21/192 (10%)
Query: 423 LFQATNGFSENNLIGRGGVASVYKARIQDGIE-VAVKVFDLQYEGAFKSFDI-ECDMMKR 480
++ ++ F +L+G G V A + E VA+K + + F + E ++K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 481 IRHRNLIKIISSCSNDDFK----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVAS 536
+H N+I I + D F+ +++ + L + + + D Q +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF--IYQTLR 123
Query: 537 ALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKED---------QSLTQ 587
A++ LH G +V IH DLKP+N+L++ N + DFG+A+ ++ E Q
Sbjct: 124 AVKVLH-GSNV--IHRDLKPSNLLINSNCDLKVCDFGLAR-IIDESAADNSEPTGQQSGM 179
Query: 588 TQTLATIGYMAP 599
T+ +AT Y AP
Sbjct: 180 TEYVATRWYRAP 191
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Query: 180 NKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPLEIGN 239
NK+S P F L L LYL NQL +P + K + L + N T
Sbjct: 86 NKISKISPGAFAPLVKLERLYLSKNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNG 143
Query: 240 LRVLVQIDLSMNNF--SGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLS 297
L ++ ++L N SG +K L Y+ + + +IP + L L L
Sbjct: 144 LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPP--SLTELHLD 200
Query: 298 NNNISGAIPISLEKLLDLKYINVSFNKL 325
N I+ SL+ L +L + +SFN +
Sbjct: 201 GNKITKVDAASLKGLNNLAKLGLSFNSI 228
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 85/231 (36%), Gaps = 15/231 (6%)
Query: 78 LSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLTNLTTIYLGGNKLNGS 137
L NN + I NL +++ + N IS P + L L +YL N+L
Sbjct: 57 LDLQNNKITEIKDGDFKNL-KNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE- 114
Query: 138 IPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKL--SGFVPACFGNLTS 195
+ +N++ G N L SG F +
Sbjct: 115 --LPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK 172
Query: 196 LRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPLEIGNLRVLVQIDLSMNNFSG 255
L + + +T+IP L + L+L N T + L L ++ LS N+ S
Sbjct: 173 LSYIRIADTNITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230
Query: 256 FIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLD---LSNNNISG 303
++ + L+ L L N+L +P GGL D K + L NNNIS
Sbjct: 231 VDNGSLANTPHLRELHLNNNKLV-KVP---GGLADHKYIQVVYLHNNNISA 277
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 78/180 (43%), Gaps = 19/180 (10%)
Query: 436 IGRGGVASVY----KARIQDGIEVAVKVFDLQYEGAFKS---FDIECDMMKRIRHRNLIK 488
+G+G VY K ++D E V + + + + F E +MK ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVASALE 539
++ S +++E M G L+ L S +N +L + + + + ++A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 540 YLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
YL+ + +H DL N + ++ + DFGM + + + D + L + +M+P
Sbjct: 140 YLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Query: 180 NKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPLEIGN 239
NK+S P F L L LYL NQL +P + K + L + N T
Sbjct: 86 NKISKISPGAFAPLVKLERLYLSKNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNG 143
Query: 240 LRVLVQIDLSMNNF--SGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLS 297
L ++ ++L N SG +K L Y+ + + +IP + L L L
Sbjct: 144 LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPP--SLTELHLD 200
Query: 298 NNNISGAIPISLEKLLDLKYINVSFNKL 325
N I+ SL+ L +L + +SFN +
Sbjct: 201 GNKITKVDAASLKGLNNLAKLGLSFNSI 228
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 85/231 (36%), Gaps = 15/231 (6%)
Query: 78 LSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLTNLTTIYLGGNKLNGS 137
L NN + I NL +++ + N IS P + L L +YL N+L
Sbjct: 57 LDLQNNKITEIKDGDFKNL-KNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE- 114
Query: 138 IPIAXXXXXXXXXXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKL--SGFVPACFGNLTS 195
+ +N++ G N L SG F +
Sbjct: 115 --LPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK 172
Query: 196 LRNLYLGSNQLTSIPSTLWNLKYILYLNLSSNSFTGPLPLEIGNLRVLVQIDLSMNNFSG 255
L + + +T+IP L + L+L N T + L L ++ LS N+ S
Sbjct: 173 LSYIRIADTNITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230
Query: 256 FIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLD---LSNNNISG 303
++ + L+ L L N+L +P GGL D K + L NNNIS
Sbjct: 231 VDNGSLANTPHLRELHLNNNKLV-KVP---GGLADHKYIQVVYLHNNNISA 277
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G++ A K + + + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + + + + + + + YLH S+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 549 IIHCDLKPNNVLLDDNMVA----HLSDFGMAKPL 578
I H DLKP N++L D V + DFG+A +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H ++ IIH D+KP+N+LLD + L DFG++ L+ S+ +T+ YMAP
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV---DSIAKTRDAGCRPYMAP 194
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 428 NGFSENNLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDI-ECDMMKRIRHRN 485
+ F + + +G G V+K + G+ +A K+ L+ + A ++ I E ++
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFG 544
++ + +D ++ +E+M GSL++ L + I + I +++I V L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 142
Query: 545 YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ I+H D+KP+N+L++ L DFG++ L+ + T YM+P
Sbjct: 143 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSP 191
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 87/175 (49%), Gaps = 11/175 (6%)
Query: 428 NGFSENNLIGRGGVASVYK-ARIQDGIEVAVKVFDLQYEGAFKSFDI-ECDMMKRIRHRN 485
+ F + + +G G V+K + G+ +A K+ L+ + A ++ I E ++
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFG 544
++ + +D ++ +E+M GSL++ L + I + I +++I V L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 185
Query: 545 YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ I+H D+KP+N+L++ L DFG++ L+ S+ + + T YM+P
Sbjct: 186 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 234
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 428 NGFSENNLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDI-ECDMMKRIRHRN 485
+ F + + +G G V+K + G+ +A K+ L+ + A ++ I E ++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFG 544
++ + +D ++ +E+M GSL++ L + I + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 545 YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ I+H D+KP+N+L++ L DFG++ L+ + T YM+P
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSP 172
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G+E A K + A + + E +++++ H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + L + + + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 549 IIHCDLKPNNV-LLDDNM-VAHLS--DFGMAKPL 578
I H DLKP N+ LLD N+ + H+ DFG+A +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 21/185 (11%)
Query: 425 QATNGFSENNLIGRGGVASVY-KARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRH 483
+ N + IG G +Y A I G EVA+K+ ++ + IE K ++
Sbjct: 6 RVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHP--QLHIESKFYKMMQG 63
Query: 484 RNLIKIISSCSND-DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH 542
I I C + D+ +V+E + SLE + + L + + S +EY+H
Sbjct: 64 GVGIPSIKWCGAEGDYNVMVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 122
Query: 543 FGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPL----------LKEDQSLTQTQ 589
S IH D+KP+N L+ + ++ DFG+AK +E+++LT T
Sbjct: 123 ---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTA 179
Query: 590 TLATI 594
A+I
Sbjct: 180 RYASI 184
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 576
S+ +I+ DLKP N+L+D ++DFG AK
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 428 NGFSENNLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDI-ECDMMKRIRHRN 485
+ F + + +G G V+K + G+ +A K+ L+ + A ++ I E ++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFG 544
++ + +D ++ +E+M GSL++ L + I + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 545 YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ I+H D+KP+N+L++ L DFG++ L+ + T YM+P
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSP 172
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + + D Q L + + L+Y+H S
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL--IYQILRGLKYIH---S 139
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 187
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G+E A K + A + + E +++++ H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + L + + + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 549 IIHCDLKPNNV-LLDDNM-VAHLS--DFGMAKPL 578
I H DLKP N+ LLD N+ + H+ DFG+A +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G+E A K + A + + E +++++ H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + L + + + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 549 IIHCDLKPNNV-LLDDNM-VAHLS--DFGMAKPL 578
I H DLKP N+ LLD N+ + H+ DFG+A +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 428 NGFSENNLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDI-ECDMMKRIRHRN 485
+ F + + +G G V+K + G+ +A K+ L+ + A ++ I E ++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFG 544
++ + +D ++ +E+M GSL++ L + I + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 545 YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ I+H D+KP+N+L++ L DFG++ L+ + T YM+P
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSP 172
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 428 NGFSENNLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDI-ECDMMKRIRHRN 485
+ F + + +G G V+K + G+ +A K+ L+ + A ++ I E ++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFG 544
++ + +D ++ +E+M GSL++ L + I + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 545 YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ I+H D+KP+N+L++ L DFG++ L+ + T YM+P
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSP 172
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 31/189 (16%)
Query: 436 IGRGGVASVYKA------RIQDGIEVAVKVFDLQYEGA----FKSFDIECDMMKRIRHR- 484
+GRG V +A + VAVK+ EGA ++ E ++ I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 93
Query: 485 NLIKIISSCSNDDFKALVL-EYMPHGSLEKCL---------YSSNYILDIFQRLNIMI-- 532
N++ ++ +C+ +V+ E+ G+L L Y + F L +I
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 533 --DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQT 590
VA +E+L S IH DL N+LL + V + DFG+A+ + K+ + +
Sbjct: 154 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 591 LATIGYMAP 599
+ +MAP
Sbjct: 211 RLPLKWMAP 219
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 10/171 (5%)
Query: 434 NLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIECDMMKRIRHRNLI 487
++G G +VYK I DG I VA+KV + A K E +M + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+++ C + LV + MP+G L + + L LN + +A + YL V
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DV 138
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
++H DL NVL+ ++DFG+A+ L ++ I +MA
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA 189
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVK-VFDLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + + A K E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG AK L E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 190
Query: 595 GYMA 598
+MA
Sbjct: 191 KWMA 194
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G+E A K + A + + E +++++ H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + L + + + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 549 IIHCDLKPNNV-LLDDNM-VAHLS--DFGMAKPL 578
I H DLKP N+ LLD N+ + H+ DFG+A +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVK-VFDLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + + A K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG AK L E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 595 GYMA 598
+MA
Sbjct: 186 KWMA 189
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G+E A K + A + + E +++++ H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + L + + + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 549 IIHCDLKPNNV-LLDDNM-VAHLS--DFGMAKPL 578
I H DLKP N+ LLD N+ + H+ DFG+A +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIIS- 491
+G G SV A + G VAVK ++ K E ++K ++H N+I ++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 492 ---SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 163
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 210
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 87/175 (49%), Gaps = 11/175 (6%)
Query: 428 NGFSENNLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDI-ECDMMKRIRHRN 485
+ F + + +G G V+K + G+ +A K+ L+ + A ++ I E ++
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 486 LIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVASALEYLHFG 544
++ + +D ++ +E+M GSL++ L + I + I +++I V L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 150
Query: 545 YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ I+H D+KP+N+L++ L DFG++ L+ S+ + + T YM+P
Sbjct: 151 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 199
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIIS- 491
+G G SV A + G VAVK ++ K E ++K ++H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 492 ---SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 140
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 187
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 166
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E +AT Y AP
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGYVATRWYRAP 214
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIIS- 491
+G G SV A + G VAVK ++ K E ++K ++H N+I ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 492 ---SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 164
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 211
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G++ A K + + + + E ++K I+H N+I
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + + + + + + + YLH S+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 549 IIHCDLKPNNVLLDDNMVA----HLSDFGMAKPL 578
I H DLKP N++L D V + DFG+A +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 14/178 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDI-----ECDMMKRI 481
N F L+G+G V R + G A+K+ L+ E ++ E +++
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKI--LRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH L + + D V+EY G L L + R ++ SALEYL
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL 121
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +++ D+K N++LD + ++DFG+ K + + T T Y+AP
Sbjct: 122 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGTPEYLAP 174
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 98
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 153
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 201
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVK-VFDLQYEGAFKSFDIE 474
L + + T F + ++G G +VYK I +G I VA+K + + A K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG AK L E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 183
Query: 595 GYMA 598
+MA
Sbjct: 184 KWMA 187
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 124/312 (39%), Gaps = 17/312 (5%)
Query: 35 FIPNTFGNLRNLKRLSLNYNYLTSSTPKLNFLSSLSNCKYLKYLSFSNNSLDGILPRAIG 94
FIP NL NL+ L L N+++S +F + + LK L F NN++ I +
Sbjct: 119 FIP--VHNLENLESLYLGSNHISSIKFPKDFPA-----RNLKVLDFQNNAIHYISREDMR 171
Query: 95 NLSQSMEVFFMFNCNISGSIPEEISNLTNLTTIYLGGNK-----LNGSIPIAXXXXXXXX 149
+L Q++ + FN N I + T ++ GG NG
Sbjct: 172 SLEQAINLSLNFNGNNVKGIELGAFDSTIFQSLNFGGTPNLSVIFNGLQNSTTQSLWLGT 231
Query: 150 XXXXEDNQLEGSIPXXXXXXXXXXXXXXGGNKLSGFVPACFGNLTSLRNLYLGSNQLTSI 209
+D + ++ ++ S F T L+ L L + L +
Sbjct: 232 FEDIDDEDISSAM-LKGLCEMSVESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLKGL 290
Query: 210 PSTLWNLKYILYLNLSSNSFTGPLPLEIGNLRVLVQIDLSMNNFSGFIPT-TIGDLKDLQ 268
PS + L + L LS N F + N L + + N + + L +LQ
Sbjct: 291 PSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGNVKKLHLGVGCLEKLGNLQ 350
Query: 269 YLFLEYNRLQGSIPDS--IGGLIDLKSLDLSNNNISGAIPISLEKLLDLKYINVSFNKLE 326
L L +N ++ S S + L L++L+LS+N G + ++ L+ ++++F +L
Sbjct: 351 TLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLH 410
Query: 327 GEIPREGPFRNF 338
P + PF+N
Sbjct: 411 INAP-QSPFQNL 421
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E +++ RH L + + D V+EY G L L + R +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 113
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
+ SALEYLH S +++ D+K N++LD + ++DFG+ K + + T T
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGT 168
Query: 594 IGYMAP 599
Y+AP
Sbjct: 169 PEYLAP 174
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 504 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD 563
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 120 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 564 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
V + DFG+A+ + K+ + + + +MAP
Sbjct: 175 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAP 210
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIIS--- 491
+G GG V+ A D VA+K L + K E +++R+ H N++K+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 492 ---SCSNDDFKAL--------VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEY 540
S DD +L V EYM L L +L+ RL M + L+Y
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL-EQGPLLEEHARL-FMYQLLRGLKY 135
Query: 541 LHFGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAK 576
+H S ++H DLKP N+ ++ +++V + DFG+A+
Sbjct: 136 IH---SANVLHRDLKPANLFINTEDLVLKIGDFGLAR 169
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 29/187 (15%)
Query: 436 IGRGGVASVYKA------RIQDGIEVAVKVFDLQYEGA----FKSFDIECDMMKRIRHR- 484
+GRG V +A + VAVK+ EGA ++ E ++ I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 91
Query: 485 NLIKIISSCSNDDFKALVL-EYMPHGSLEKCLYSS-----------NYILDIFQRLNIMI 532
N++ ++ +C+ +V+ E+ G+L L S L + +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 592
VA +E+L S IH DL N+LL + V + DFG+A+ + K+ + +
Sbjct: 152 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 593 TIGYMAP 599
+ +MAP
Sbjct: 209 PLKWMAP 215
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 504 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD 563
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 120 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 564 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
V + DFG+A+ + K+ + + + +MAP
Sbjct: 175 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAP 210
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVK-VFDLQYEGAFKSFDIE 474
L + + T F + ++ G +VYK I +G I VA+K + + A K E
Sbjct: 16 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 595 GYMA 598
+MA
Sbjct: 191 KWMA 194
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 24/158 (15%)
Query: 180 NKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWN------------LKYILYLNLSSN 227
N+L+ F L+ LR L+L +N + SIPS +N LK + Y +S
Sbjct: 93 NRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEY--ISEA 150
Query: 228 SFTGPLPLEIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGG 287
+F G + NLR L +L M N IP + L L+ L L NRL P S G
Sbjct: 151 AFEG-----LVNLRYL---NLGMCNLKD-IP-NLTALVRLEELELSGNRLDLIRPGSFQG 200
Query: 288 LIDLKSLDLSNNNISGAIPISLEKLLDLKYINVSFNKL 325
L L+ L L + ++ + + L L+ +N+S N L
Sbjct: 201 LTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 178 GGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLW-NLKYILYLNLSSNSF 229
GN+L P F LTSLR L+L Q+ +I + +LK + LNLS N+
Sbjct: 186 SGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E +++ RH L + + D V+EY G L L + R +
Sbjct: 58 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 116
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
+ SALEYLH S +++ D+K N++LD + ++DFG+ K + + T T
Sbjct: 117 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGT 171
Query: 594 IGYMAP 599
Y+AP
Sbjct: 172 PEYLAP 177
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 14/178 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDI-----ECDMMKRI 481
N F L+G+G V R + G A+K+ L+ E ++ E +++
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKI--LRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH L + + D V+EY G L L + R ++ SALEYL
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL 121
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H S +++ D+K N++LD + ++DFG+ K + + T T Y+AP
Sbjct: 122 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGTPEYLAP 174
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 504 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD 563
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 131 EFVPYKEAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 185
Query: 564 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
V + DFG+A+ + K+ + + + +MAP
Sbjct: 186 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 221
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E +++ RH L + + D V+EY G L L + R +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 113
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
+ SALEYLH S +++ D+K N++LD + ++DFG+ K + + T T
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGT 168
Query: 594 IGYMAP 599
Y+AP
Sbjct: 169 PEYLAP 174
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 428 NGFSENNLIGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFKSFDI---ECDMMKRIRH 483
+ F +G G V + ++ G A+K+ D Q K + E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
L+K+ S ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S+ +I+ DLKP N+++D ++DFG AK + L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAP 207
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 427 TNGFSENNLIGRGGVASVY--KARIQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
++ + ++G+G V K +I G E AVKV ++ + +S E ++K++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
H N++K+ + + LV E G L + S ++ I+ V S + Y+
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 166
Query: 542 HFGYSVPIIHCDLKPNNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
H I+H DLKP N+LL+ + + DFG++ + S + T Y+A
Sbjct: 167 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIA 220
Query: 599 P 599
P
Sbjct: 221 P 221
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 427 TNGFSENNLIGRGGVASVY--KARIQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
++ + ++G+G V K +I G E AVKV ++ + +S E ++K++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
H N++K+ + + LV E G L + S ++ I+ V S + Y+
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 165
Query: 542 HFGYSVPIIHCDLKPNNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
H I+H DLKP N+LL+ + + DFG++ + S + T Y+A
Sbjct: 166 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIA 219
Query: 599 P 599
P
Sbjct: 220 P 220
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 436 IGRGGVASV----YKARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
IG G V Y + + VA+K + + + F E M++ H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
+ + +++E G L L + LD+ + +++AL YL S +
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H D+ NVL+ N L DFG+++ +++ ++ I +MAP
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAP 561
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 427 TNGFSENNLIGRGGVASVY--KARIQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
++ + ++G+G V K +I G E AVKV ++ + +S E ++K++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
H N++K+ + + LV E G L + S ++ I+ V S + Y+
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 142
Query: 542 HFGYSVPIIHCDLKPNNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
H I+H DLKP N+LL+ + + DFG++ + S + T Y+A
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIA 196
Query: 599 P 599
P
Sbjct: 197 P 197
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E +++ RH L + + D V+EY G L L + R +
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 118
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
+ SALEYLH S +++ D+K N++LD + ++DFG+ K + + T T
Sbjct: 119 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGT 173
Query: 594 IGYMAP 599
Y+AP
Sbjct: 174 PEYLAP 179
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 485 NLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH 542
N+IK+I + + K ALV EY+ + K LY IL F M ++ AL+Y H
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDF-KQLYQ---ILTDFDIRFYMYELLKALDYCH 154
Query: 543 FGYSVPIIHCDLKPNNVLLDDNMVA-HLSDFGMAK 576
S I+H D+KP+NV++D L D+G+A+
Sbjct: 155 ---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE 186
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 149
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E T +AT Y AP
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 197
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 439 GGVASVYKARIQDGIEVAVKVF--DLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSND 496
G V S R G +VA+K Q E K E ++K +RH N+I ++ + D
Sbjct: 39 GAVCSAVDGRT--GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPD 96
Query: 497 ----DFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
DF LV+ +M L K + D Q L V L+ L + ++ II
Sbjct: 97 ETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFL-----VYQMLKGLRYIHAAGII 150
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAK 576
H DLKP N+ ++++ + DFG+A+
Sbjct: 151 HRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMID 533
E +++ RH L + + D V+EY G L L + R +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 113
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
+ SALEYLH S +++ D+K N++LD + ++DFG+ K + + T T
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGT 168
Query: 594 IGYMAP 599
Y+AP
Sbjct: 169 PEYLAP 174
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 435 LIGRGGVASVYKARIQDGIEV-AVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKII 490
+G+GG A ++ D EV A K+ L + +E + + + H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
++DF +VLE SL + L+ L + + + +YLH +I
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 139
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
H DLK N+ L++++ + DFG+A K + + +TL T Y+AP
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLCGTPNYIAP 186
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 435 LIGRGGVASVYKARIQDGIEV-AVKVFDLQYEGAFKSFD---IECDMMKRIRHRNLIKII 490
+IGRG A V R++ + A+KV + + D E + ++ + + +
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 491 SSCSNDDFKAL-VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPI 549
SC + + V+EY+ G L + + + R +++ AL YLH I
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 127
Query: 550 IHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
I+ DLK +NVLLD L+D+GM K L+ T + T Y+AP
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAP 175
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 504 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD 563
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 129 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 183
Query: 564 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
V + DFG+A+ + K+ + + + +MAP
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAP 219
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 435 LIGRGGVASVYKARIQDGIEV-AVKVFDLQYEGAFKSFD---IECDMMKRIRHRNLIKII 490
+IGRG A V R++ + A+KV + + D E + ++ + + +
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 491 SSCSNDDFKAL-VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPI 549
SC + + V+EY+ G L + + + R +++ AL YLH I
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 142
Query: 550 IHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
I+ DLK +NVLLD L+D+GM K L+ T + T Y+AP
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAP 190
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 485 NLIKIISSCSNDDFK--ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH 542
N+IK+I + + K ALV EY+ + K LY IL F M ++ AL+Y H
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDF-KQLYQ---ILTDFDIRFYMYELLKALDYCH 149
Query: 543 FGYSVPIIHCDLKPNNVLLDDNMVA-HLSDFGMAK 576
S I+H D+KP+NV++D L D+G+A+
Sbjct: 150 ---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE 181
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 435 LIGRGGVASVYKARIQDGIEV-AVKVFDLQYEGAFKSFD---IECDMMKRIRHRNLIKII 490
+IGRG A V R++ + A+KV + + D E + ++ + + +
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 491 SSCSNDDFKAL-VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPI 549
SC + + V+EY+ G L + + + R +++ AL YLH I
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 131
Query: 550 IHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
I+ DLK +NVLLD L+D+GM K L+ T + T Y+AP
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAP 179
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 435 LIGRGGVASVYKARIQDGIEV-AVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKII 490
+G+GG A ++ D EV A K+ L + +E + + + H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
++DF +VLE SL + L+ L + + + +YLH +I
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 143
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
H DLK N+ L++++ + DFG+A K + + +TL T Y+AP
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKTLCGTPNYIAP 190
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 504 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD 563
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 129 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 183
Query: 564 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
V + DFG+A+ + K+ + + + +MAP
Sbjct: 184 KNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAP 219
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 88/190 (46%), Gaps = 25/190 (13%)
Query: 397 RKRGKSQLADANMPLVANLRRFTHLELFQATNGFSENNLIGRGGVASVYKARIQDGIE-- 454
RK+ S A+MP H + +Q + + +LIG G V +A D +E
Sbjct: 30 RKQHHSSKPTASMPR-------PHSD-WQIPDRYEIRHLIGTGSYGHVCEA--YDKLEKR 79
Query: 455 -VAVKVFDLQYEGAFKSFDI--ECDMMKRIRHRNLIKIISSCSNDDFKA-----LVLEYM 506
VA+K +E I E ++ R+ H +++K++ D + +VLE +
Sbjct: 80 VVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE-I 138
Query: 507 PHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMV 566
+K + Y+ ++ + ++ ++ ++Y+H S I+H DLKP N L++ +
Sbjct: 139 ADSDFKKLFRTPVYLTELHIK-TLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCS 194
Query: 567 AHLSDFGMAK 576
+ DFG+A+
Sbjct: 195 VKVCDFGLAR 204
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 29/187 (15%)
Query: 436 IGRGGVASVYKA------RIQDGIEVAVKVFDLQYEGA----FKSFDIECDMMKRIRHR- 484
+GRG V +A + VAVK+ EGA ++ E ++ I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 91
Query: 485 NLIKIISSCSNDDFKALVL-EYMPHGSLEKCLYSS-------NYILDIFQRLNIMI---- 532
N++ ++ +C+ +V+ E+ G+L L S + F L +I
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 533 DVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA 592
VA +E+L S IH DL N+LL + V + DFG+A+ + K+ + +
Sbjct: 152 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 593 TIGYMAP 599
+ +MAP
Sbjct: 209 PLKWMAP 215
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 504 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD 563
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 120 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 564 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
V + DFG+A+ + K+ + + + +MAP
Sbjct: 175 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 210
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G+E A K + A + + E +++++ H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+LE + G L L + L + + + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 549 IIHCDLKPNNV-LLDDNM-VAHLS--DFGMAKPL 578
I H DLKP N+ LLD N+ + H+ DFG+A +
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 435 LIGRGGVASVYKARIQDGIEV-AVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKII 490
+G+GG A ++ D EV A K+ L + +E + + + H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
++DF +VLE SL + L+ L + + + +YLH +I
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 139
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLA-TIGYMAP 599
H DLK N+ L++++ + DFG+A K + + +TL T Y+AP
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLCGTPNYIAP 186
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 504 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD 563
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 120 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 564 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
V + DFG+A+ + K+ + + + +MAP
Sbjct: 175 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 210
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 504 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD 563
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 166 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 220
Query: 564 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
V + DFG+A+ + K+ + + + +MAP
Sbjct: 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 256
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 13/143 (9%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI-ECDMMKRIRHRNLIKIISSC 493
+GRG V++ Q G + AVK L+ F++ ++ C + R ++ + +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLE---VFRAEELMACAGLTSPR---IVPLYGAV 154
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ + +E + GSL + L L + L + LEYLH S I+H D
Sbjct: 155 REGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEYLH---SRRILHGD 210
Query: 554 LKPNNVLL-DDNMVAHLSDFGMA 575
+K +NVLL D A L DFG A
Sbjct: 211 VKADNVLLSSDGSHAALCDFGHA 233
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 436 IGRG--GVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMM--KRIRHRNLIKIIS 491
IG G GVA + + ++ + VAVK + GA +++ +++ + +RH N+++
Sbjct: 28 IGSGNFGVARLMRDKLTKEL-VAVKYIE---RGAAIDENVQREIINHRSLRHPNIVRFKE 83
Query: 492 SCSNDDFKALVLEYMPHGSL-EKCLYSSNYILD----IFQRLNIMIDVASALEYLHFGYS 546
A+++EY G L E+ + + D FQ+L S + Y H S
Sbjct: 84 VILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL------LSGVSYCH---S 134
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLS--DFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ I H DLK N LLD + L DFG +K + Q + T+ T Y+AP
Sbjct: 135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIAP 186
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 24/179 (13%)
Query: 436 IGRGGVASVYKAR-IQDGIE-VAVKVFDLQY--EGAFKSFDIECDMMKRIR---HRNLIK 488
IG G V+KAR +++G VA+K +Q EG S E +++ + H N+++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 489 IISSC--SNDDFKA---LVLEYMPHG---SLEKCLYSSNYILDIFQRLNIMIDVASALEY 540
+ C S D + LV E++ L+K I ++M + L++
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI---KDMMFQLLRGLDF 135
Query: 541 LHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LH S ++H DLKP N+L+ + L+DFG+A+ + + T + T+ Y AP
Sbjct: 136 LH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAP 188
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 24/158 (15%)
Query: 180 NKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWN------------LKYILYLNLSSN 227
N+L+ F L+ LR L+L +N + SIPS +N LK + Y +S
Sbjct: 93 NRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEY--ISEA 150
Query: 228 SFTGPLPLEIGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGG 287
+F G + NLR L +L M N IP + L L+ L L NRL P S G
Sbjct: 151 AFEG-----LVNLRYL---NLGMCNLKD-IP-NLTALVRLEELELSGNRLDLIRPGSFQG 200
Query: 288 LIDLKSLDLSNNNISGAIPISLEKLLDLKYINVSFNKL 325
L L+ L L + ++ + + L L+ +N+S N L
Sbjct: 201 LTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 178 GGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLW-NLKYILYLNLSSNSF 229
GN+L P F LTSLR L+L Q+ +I + +LK + LNLS N+
Sbjct: 186 SGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 30/176 (17%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSND 496
+G V + Y A ++ + + Q + K E +MK + H+N+I +++
Sbjct: 36 AQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV---- 91
Query: 497 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----------- 545
+ P SLE+ + YI+ N+ + L++ Y
Sbjct: 92 --------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 546 --SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S IIH DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYRAP 194
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 504 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD 563
E++P+ + E LY L + + VA +E+L S IH DL N+LL +
Sbjct: 130 EFVPYKTPED-LYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 183
Query: 564 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
V + DFG+A+ + K+ + + + +MAP
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAP 219
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
VA +E+L S IH DL N+LL + V + DFG+A+ + K+ + +
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 594 IGYMAP 599
+ +MAP
Sbjct: 257 LKWMAP 262
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + FG+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 504 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD 563
E++P+ + LY L + + VA +E+L S IH DL N+LL +
Sbjct: 129 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 183
Query: 564 NMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
V + DFG+A+ + K+ + + + +MAP
Sbjct: 184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 219
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 9/167 (5%)
Query: 436 IGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G V++ + G A K +E ++ E M +RH L+ + +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+D+ ++ E+M G L + + + + + + M V L ++H +H DL
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDL 281
Query: 555 KPNNVLLDDNMVAHLS--DFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
KP N++ L DFG+ L D + T T + AP
Sbjct: 282 KPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAP 325
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 24/179 (13%)
Query: 436 IGRGGVASVYKAR-IQDGIE-VAVKVFDLQY--EGAFKSFDIECDMMKRIR---HRNLIK 488
IG G V+KAR +++G VA+K +Q EG S E +++ + H N+++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 489 IISSC--SNDDFKA---LVLEYMPHG---SLEKCLYSSNYILDIFQRLNIMIDVASALEY 540
+ C S D + LV E++ L+K I ++M + L++
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI---KDMMFQLLRGLDF 135
Query: 541 LHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LH S ++H DLKP N+L+ + L+DFG+A+ + + T + T+ Y AP
Sbjct: 136 LH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAP 188
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 13/143 (9%)
Query: 436 IGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFDI-ECDMMKRIRHRNLIKIISSC 493
+GRG V++ Q G + AVK L+ F++ ++ C + R ++ + +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLE---VFRAEELMACAGLTSPR---IVPLYGAV 135
Query: 494 SNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 553
+ + +E + GSL + L L + L + LEYLH S I+H D
Sbjct: 136 REGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEYLH---SRRILHGD 191
Query: 554 LKPNNVLL-DDNMVAHLSDFGMA 575
+K +NVLL D A L DFG A
Sbjct: 192 VKADNVLLSSDGSHAALCDFGHA 214
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
VA +E+L S IH DL N+LL + V + DFG+A+ + K+ + +
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 594 IGYMAP 599
+ +MAP
Sbjct: 259 LKWMAP 264
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 435 LIGRGGVASVYKARIQDGIEV-AVKVFDLQYEGAFKSFD---IECDMMKRIRHRNLIKII 490
+IGRG A V R++ + A++V + + D E + ++ + + +
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 491 SSCSNDDFKAL-VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPI 549
SC + + V+EY+ G L + + + R +++ AL YLH I
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 174
Query: 550 IHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
I+ DLK +NVLLD L+D+GM K L+ T + T Y+AP
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAP 222
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFD-IECDMMK 479
E + + + +GRG V++ + Q G + AVK L+ F+ + + C +
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE---VFRVEELVACAGLS 108
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALE 539
R ++ + + + + +E + GSL + L L + L + LE
Sbjct: 109 SPR---IVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLE 164
Query: 540 YLHFGYSVPIIHCDLKPNNVLL-DDNMVAHLSDFGMA 575
YLH + I+H D+K +NVLL D A L DFG A
Sbjct: 165 YLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA 198
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 423 LFQATNGFSENNLIGRGGVASVYKARIQDGIE-VAVKVFDLQYEGAFKSFDI-ECDMMKR 480
++ ++ F +L+G G V A + E VA+K + + F + E ++K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 481 IRHRNLIKIISSCSNDDFK----ALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVAS 536
+H N+I I + D F+ +++ + L + + + D Q +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF--IYQTLR 123
Query: 537 ALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKED---------QSLTQ 587
A++ LH G +V IH DLKP+N+L++ N + DFG+A+ ++ E Q
Sbjct: 124 AVKVLH-GSNV--IHRDLKPSNLLINSNCDLKVCDFGLAR-IIDESAADNSEPTGQQSGM 179
Query: 588 TQTLATIGYMAP 599
+ +AT Y AP
Sbjct: 180 VEFVATRWYRAP 191
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 11/184 (5%)
Query: 421 LELFQATNGFSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIE 474
L + + T F + ++ G +VYK I +G I VA+K + A K E
Sbjct: 16 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 475 CDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDV 534
+M + + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 535 ASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATI 594
A + YL ++H DL NVL+ ++DFG+AK L E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 595 GYMA 598
+MA
Sbjct: 191 KWMA 194
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 9/167 (5%)
Query: 436 IGRGGVASVYKARIQ-DGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCS 494
+G G V++ + G A K +E ++ E M +RH L+ + +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 495 NDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 554
+D+ ++ E+M G L + + + + + + M V L ++H +H DL
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDL 175
Query: 555 KPNNVLLDDNMVAHLS--DFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
KP N++ L DFG+ L D + T T + AP
Sbjct: 176 KPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAP 219
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 24/179 (13%)
Query: 436 IGRGGVASVYKAR-IQDGIE-VAVKVFDLQY--EGAFKSFDIECDMMKRIR---HRNLIK 488
IG G V+KAR +++G VA+K +Q EG S E +++ + H N+++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 489 IISSC--SNDDFKA---LVLEYMPHG---SLEKCLYSSNYILDIFQRLNIMIDVASALEY 540
+ C S D + LV E++ L+K I ++M + L++
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI---KDMMFQLLRGLDF 135
Query: 541 LHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
LH S ++H DLKP N+L+ + L+DFG+A+ + T + T+ Y AP
Sbjct: 136 LH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAP 188
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + D G+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN- 495
+G V + Y A + + + Q + K E +MK + H+N+I +++ +
Sbjct: 36 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQ 95
Query: 496 ---DDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
++F+ LV+E M +L + + LD + ++ + +++LH S II
Sbjct: 96 KTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLXGIKHLH---SAGII 148
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 21/185 (11%)
Query: 425 QATNGFSENNLIGRGGVASVY-KARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRH 483
+ N + IG G +Y I G EVA+K+ ++ + IE + K ++
Sbjct: 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP--QLHIESKIYKMMQG 63
Query: 484 RNLIKIISSCSND-DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH 542
I I C + D+ +V+E + SLE + + L + + S +EY+H
Sbjct: 64 GVGIPTIRWCGAEGDYNVMVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 122
Query: 543 FGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPL----------LKEDQSLTQTQ 589
S IH D+KP+N L+ + ++ DFG+AK +E+++LT T
Sbjct: 123 ---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTA 179
Query: 590 TLATI 594
A+I
Sbjct: 180 RYASI 184
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 163
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E +AT Y AP
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGXVATRWYRAP 211
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
VA +E+L S IH DL N+LL + V + DFG+A+ + K+ + +
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 594 IGYMAP 599
+ +MAP
Sbjct: 264 LKWMAP 269
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 534 VASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLAT 593
VA +E+L S IH DL N+LL + V + DFG+A+ + K+ + +
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 594 IGYMAP 599
+ +MAP
Sbjct: 266 LKWMAP 271
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 10/175 (5%)
Query: 430 FSENNLIGRGGVASVYKA-RIQDG----IEVAVKVF-DLQYEGAFKSFDIECDMMKRIRH 483
F + ++ G +VYK I +G I VA+K + A K E +M + +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 484 RNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHF 543
++ +++ C + L+ + MP G L + + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 134
Query: 544 GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
++H DL NVL+ ++DFG+AK L E++ I +MA
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 23/186 (12%)
Query: 425 QATNGFSENNLIGRGGVASVY-KARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRH 483
+ N + IG G +Y I G EVA+K+ ++ + IE + K ++
Sbjct: 4 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP--QLHIESKIYKMMQG 61
Query: 484 RNLIKIISSCSND-DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH 542
I I C + D+ +V+E + SLE + + L + + S +EY+H
Sbjct: 62 GVGIPTIRWCGAEGDYNVMVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 543 FGYSVPIIHCDLKPNNVLL----DDNMVAHLSDFGMAKPL----------LKEDQSLTQT 588
S IH D+KP+N L+ N+V ++ DFG+AK +E+++LT T
Sbjct: 121 ---SKNFIHRDVKPDNFLMGLGKKGNLV-YIIDFGLAKKYRDARTHQHIPYRENKNLTGT 176
Query: 589 QTLATI 594
A+I
Sbjct: 177 ARYASI 182
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH L + S D V+EY G L L + R ++ SAL+YL
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYL 267
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H +V ++ DLK N++LD + ++DFG+ K +K+ T T Y+AP
Sbjct: 268 HSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKTFCGTPEYLAP 321
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN- 495
+G V + Y A + + + Q + K E +MK + H+N+I +++ +
Sbjct: 36 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQ 95
Query: 496 ---DDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
++F+ LV+E M +L + + LD + ++ + +++LH S II
Sbjct: 96 KTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGII 148
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH L + S D V+EY G L L + R ++ SAL+YL
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYL 264
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H +V ++ DLK N++LD + ++DFG+ K +K+ T T Y+AP
Sbjct: 265 HSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKTFCGTPEYLAP 318
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + D G+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFD-IECDMMK 479
E + + + +GRG V++ + Q G + AVK L+ F+ + + C +
Sbjct: 68 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE---VFRVEELVACAGLS 124
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALE 539
R ++ + + + + +E + GSL + L L + L + LE
Sbjct: 125 SPR---IVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLE 180
Query: 540 YLHFGYSVPIIHCDLKPNNVLL-DDNMVAHLSDFGMA 575
YLH + I+H D+K +NVLL D A L DFG A
Sbjct: 181 YLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA 214
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 435 LIGRGGVASVYKARIQDGIEV-AVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKII 490
+G+GG A ++ D EV A K+ L + +E + + + H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
++DF +VLE SL + L+ L + + + +YLH +I
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 163
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLK N+ L++++ + DFG+A + E + T Y+AP
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAP 210
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 72/189 (38%), Gaps = 15/189 (7%)
Query: 180 NKLSGFVPACFGNLTSLRNLYLGSN-QLTSI-PSTLWNLKYILYLNLSSNSFTGPLPLEI 237
N L+ A F L L L L N QL S+ P+T L + L+L P
Sbjct: 65 NVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLF 124
Query: 238 GNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPD-SIGGLIDLKSLDL 296
L L + L N T DL +L +LFL NR+ S+P+ + GL L L L
Sbjct: 125 RGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI-SSVPERAFRGLHSLDRLLL 183
Query: 297 SNNNISGAIPISLEKLLDLKYINVSFNKLEGEIPRE--GPFRNFSAESFKGNELLCGTPN 354
N ++ P + L L + + N L +P E P R N +C
Sbjct: 184 HQNRVAHVHPHAFRDLGRLMTLYLFANNLSA-LPTEALAPLRALQYLRLNDNPWVCD--- 239
Query: 355 LQVPPCRTR 363
CR R
Sbjct: 240 -----CRAR 243
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 139
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E +AT Y AP
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF-----VATRWYRAP 187
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIIS----S 492
+G V + Y A ++ + + Q + K E +MK + H+N+I +++
Sbjct: 36 AQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQ 95
Query: 493 CSNDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
S ++F+ +V+E M +L + + LD + ++ + +++LH S II
Sbjct: 96 KSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLVGIKHLH---SAGII 148
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Query: 422 ELFQATNGFSENNLIGRGGVASVYKAR-IQDGIEVAVKVFDLQYEGAFKSFD-IECDMMK 479
E + + + +GRG V++ + Q G + AVK L+ F+ + + C +
Sbjct: 66 EYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLE---VFRVEELVACAGLS 122
Query: 480 RIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALE 539
R ++ + + + + +E + GSL + L L + L + LE
Sbjct: 123 SPR---IVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLE 178
Query: 540 YLHFGYSVPIIHCDLKPNNVLL-DDNMVAHLSDFGMA 575
YLH + I+H D+K +NVLL D A L DFG A
Sbjct: 179 YLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA 212
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 435 LIGRGGVASVYKARIQDGIEV-AVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKII 490
+G+GG A ++ D EV A K+ L + +E + + + H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
++DF +VLE SL + L+ L + + + +YLH +I
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 161
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLK N+ L++++ + DFG+A + E + T Y+AP
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAP 208
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAKPLLKEDQSL 585
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK +
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 172
Query: 586 TQTQTLATIGYMAP 599
+ T+ T Y+AP
Sbjct: 173 SLTEPCYTPYYVAP 186
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 30/176 (17%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSND 496
+G V + Y A ++ + + Q + K E +MK + H+N+I +++
Sbjct: 41 AQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV---- 96
Query: 497 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----------- 545
+ P SLE+ + YI+ N+ + L++ Y
Sbjct: 97 --------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 146
Query: 546 --SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S IIH DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 147 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 199
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G+ VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + D G+A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH L + S D V+EY G L L + R ++ SAL+YL
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYL 124
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H +V ++ DLK N++LD + ++DFG+ K +K+ T T Y+AP
Sbjct: 125 HSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKXFCGTPEYLAP 178
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 72/189 (38%), Gaps = 15/189 (7%)
Query: 180 NKLSGFVPACFGNLTSLRNLYLGSN-QLTSI-PSTLWNLKYILYLNLSSNSFTGPLPLEI 237
N L+ A F L L L L N QL S+ P+T L + L+L P
Sbjct: 66 NVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLF 125
Query: 238 GNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPD-SIGGLIDLKSLDL 296
L L + L N T DL +L +LFL NR+ S+P+ + GL L L L
Sbjct: 126 RGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI-SSVPERAFRGLHSLDRLLL 184
Query: 297 SNNNISGAIPISLEKLLDLKYINVSFNKLEGEIPRE--GPFRNFSAESFKGNELLCGTPN 354
N ++ P + L L + + N L +P E P R N +C
Sbjct: 185 HQNRVAHVHPHAFRDLGRLMTLYLFANNLSA-LPTEALAPLRALQYLRLNDNPWVCD--- 240
Query: 355 LQVPPCRTR 363
CR R
Sbjct: 241 -----CRAR 244
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIIS----S 492
+G V + Y A ++ + + Q + K E +MK + H+N+I +++
Sbjct: 36 AQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQ 95
Query: 493 CSNDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
S ++F+ +V+E M +L + + LD + ++ + +++LH S II
Sbjct: 96 KSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGII 148
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 38.5 bits (88), Expect = 0.010, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 180 NKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWN-LKYILYLNLSSNSFTGPLPLEIG 238
N+++ P F +L +L+ LY SN+LT+IP+ +++ L + L+L+ N
Sbjct: 43 NQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFD 102
Query: 239 NLRVLVQIDLSMN 251
NL+ L I L N
Sbjct: 103 NLKSLTHIYLYNN 115
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIIS----S 492
+G V + Y A ++ + + Q + K E +MK + H+N+I +++
Sbjct: 36 AQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQ 95
Query: 493 CSNDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
S ++F+ +V+E M +L + + LD + ++ + +++LH S II
Sbjct: 96 KSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLVGIKHLH---SAGII 148
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIIS- 491
+G G SV A + G VAVK ++ K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 492 ---SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E +AT Y AP
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF-----VATRWYRAP 191
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH L + S D V+EY G L L + R ++ SAL+YL
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYL 125
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H +V ++ DLK N++LD + ++DFG+ K +K+ T T Y+AP
Sbjct: 126 HSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKXFCGTPEYLAP 179
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
RH L + S D V+EY G L L + R ++ SAL+YL
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYL 126
Query: 542 HFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H +V ++ DLK N++LD + ++DFG+ K +K+ T T Y+AP
Sbjct: 127 HSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKXFCGTPEYLAP 180
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 427 TNGFSENNLIGRGGVASVY--KARIQDGIEVAVKVF---DLQYEGAFKSFDIECDMMKRI 481
++ + ++G+G V K +I G E AVKV ++ + +S E ++K++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 482 RHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYL 541
H N+ K+ + + LV E G L + S ++ I+ V S + Y
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYX 142
Query: 542 HFGYSVPIIHCDLKPNNVLLD---DNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMA 598
H I+H DLKP N+LL+ + + DFG++ + S + T Y+A
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDKIGTAYYIA 196
Query: 599 P 599
P
Sbjct: 197 P 197
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 436 IGRGGVASV----YKARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
IG G V Y + + VA+K + + + F E M++ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
+ + +++E G L L + LD+ + +++AL YL S +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H D+ NVL+ L DFG+++ +++ ++ I +MAP
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAP 181
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 30/176 (17%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSND 496
+G V + Y A ++ + + Q + K E +MK + H+N+I +++
Sbjct: 36 AQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV---- 91
Query: 497 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----------- 545
+ P SLE+ + YI+ N+ + L++ Y
Sbjct: 92 --------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 546 --SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S IIH DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAF--KSFDIECDMMKRIRHRNLIKIIS- 491
+G G SV A + G VAVK ++ K E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 492 ---SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DFG+A+ E +AT Y AP
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF-----VATRWYRAP 191
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 435 LIGRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMM-KRI-----RHRNLIK 488
++G+G V A + G E + L+ + + D+EC M+ KR+ + L +
Sbjct: 26 VLGKGSFGKVMLAD-RKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQ 84
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ S D V+EY+ G L +Y + F+ + A L F +
Sbjct: 85 LHSCFQTVDRLYFVMEYVNGGDL---MYHIQQV-GKFKEPQAVFYAAEISIGLFFLHKRG 140
Query: 549 IIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
II+ DLK +NV+LD ++DFGM K + + +T + T Y+AP
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD--GVTTREFCGTPDYIAP 189
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIIS----S 492
+G V + Y A ++ + + Q + K E +MK + H+N+I +++
Sbjct: 36 AQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQ 95
Query: 493 CSNDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
S ++F+ +V+E M +L + + LD + ++ + +++LH S II
Sbjct: 96 KSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLVGIKHLH---SAGII 148
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 30/176 (17%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSND 496
+G V + Y A ++ + + Q + K E +MK + H+N+I +++
Sbjct: 30 AQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV---- 85
Query: 497 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----------- 545
+ P SLE+ + YI+ N+ + L++ Y
Sbjct: 86 --------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 546 --SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S IIH DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 188
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 435 LIGRGGVASVYKARIQDGIEV-AVKVFD---LQYEGAFKSFDIECDMMKRIRHRNLIKII 490
+G+GG A ++ D EV A K+ L + +E + + + H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
++DF +VLE SL + L+ L + + + +YLH +I
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 137
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLK N+ L++++ + DFG+A + E + T Y+AP
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAP 184
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 30/176 (17%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSND 496
+G V + Y A ++ + + Q + K E +MK + H+N+I +++
Sbjct: 37 AQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV---- 92
Query: 497 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----------- 545
+ P SLE+ + YI+ N+ + L++ Y
Sbjct: 93 --------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 546 --SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S IIH DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 195
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 30/176 (17%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSND 496
+G V + Y A ++ + + Q + K E +MK + H+N+I +++
Sbjct: 36 AQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV---- 91
Query: 497 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----------- 545
+ P SLE+ + YI+ N+ + L++ Y
Sbjct: 92 --------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 546 --SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S IIH DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAK 576
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 205 QLTSIPSTLWNLKYILYLNLSSNSFTGPLPLEIGNLRVLVQIDLSMNNFSGFIPTTIGDL 264
Q+ +I + ++ ++ L L+ NS T LP EI NL L +DLS N + +P +G
Sbjct: 235 QIFNISANIFKYDFLTRLYLNGNSLTE-LPAEIKNLSNLRVLDLSHNRLTS-LPAELGSC 292
Query: 265 KDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLSNNNISGA-IPISLEKLLDLKYINVSFN 323
L+Y + ++ + ++P G L +L+ L + N + + I EK + + N
Sbjct: 293 FQLKYFYF-FDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDN 351
Query: 324 KLEGEIPREGPF 335
+ E +P E F
Sbjct: 352 RPEIPLPHERRF 363
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 12 IPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSSTPKLNFLSSLSN 71
I + IF L+RL L NS +P NL NL+ L L++N LTS + L +
Sbjct: 239 ISANIFKYDFLTRLYLNGNSLTE-LPAEIKNLSNLRVLDLSHNRLTS------LPAELGS 291
Query: 72 CKYLKYLSFSNNSLDGILPRAIGNL 96
C LKY F +N + LP GNL
Sbjct: 292 CFQLKYFYFFDNMV-TTLPWEFGNL 315
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Query: 179 GNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTL---WNLKYILYLNLSSNSFTGPLPL 235
GN L+ +PA NL++LR L L N+LTS+P+ L + LKY + ++ LP
Sbjct: 256 GNSLTE-LPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFF----DNMVTTLPW 310
Query: 236 EIGNL 240
E GNL
Sbjct: 311 EFGNL 315
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAK 576
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK
Sbjct: 165 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 483 HRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLH 542
H N++K+ + LV+E + G L + + + + + IM + SA+ ++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET-EASYIMRKLVSAVSHMH 123
Query: 543 FGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
V ++H DLKP N+L +DN+ + DFG A+ ++Q L T+ Y AP
Sbjct: 124 ---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL--KTPCFTLHYAAP 178
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAK 576
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK
Sbjct: 135 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 182
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 179 GNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPS-TLWNLKYILYLNLSSNSF-TGPLPLE 236
GN + F P F LTSL NL +L S+ S + L + LN++ N + LP
Sbjct: 84 GNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAY 143
Query: 237 IGNLRVLVQIDLSMNNFSGFIPT-TIGDLKDLQ 268
NL LV +DLS N +I T T+ DL+ L+
Sbjct: 144 FSNLTNLVHVDLSYN----YIQTITVNDLQFLR 172
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN- 495
+G V + Y A + + + Q + K E +MK + H+N+I +++ +
Sbjct: 29 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ 88
Query: 496 ---DDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
++F+ LV+E M +L + + LD + ++ + +++LH S II
Sbjct: 89 KTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLXGIKHLH---SAGII 141
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 142 HRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 187
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAK 576
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 174
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAK 576
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 172
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 15/154 (9%)
Query: 436 IGRGGVASVYKARIQD-GIEVAVKVFDLQYEGAFK------SFDIECDMMKRIRHRNLIK 488
+G G A V K R + G++ A K + + + + E ++K I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 489 IISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP 548
+ N L+ E + G L L + + + + + + + YLH S+
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYYLH---SLQ 134
Query: 549 IIHCDLKPNNVLLDDNMVA----HLSDFGMAKPL 578
I H DLKP N++L D V + DFG+A +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAK 576
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK
Sbjct: 171 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 218
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIIS----S 492
+G V + Y A ++ + + Q + K E +MK + H+N+I +++
Sbjct: 36 AQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQ 95
Query: 493 CSNDDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
S ++F+ +V+E M +L + + LD + ++ + +++LH S II
Sbjct: 96 KSLEEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGII 148
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 434 NLIGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDIE--------CDMMKRIRHR 484
+IG+G + V + + G + AVK+ D+ + E C M+K H
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK---HP 88
Query: 485 NLIKIISSCSNDDFKALVLEYMPHGSLEKCL-----YSSNYILDIFQRLNIMIDVASALE 539
++++++ + S+D +V E+M L C + ++ + M + AL
Sbjct: 89 HIVELLETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQILEALR 146
Query: 540 YLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 596
Y H IIH D+KP+ VLL +++ L FG+A L + L + T +
Sbjct: 147 YCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRVGTPHF 201
Query: 597 MAP 599
MAP
Sbjct: 202 MAP 204
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAK 576
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 173
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAK 576
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 167
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAK 576
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 166
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAK 576
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 179 GNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPS-TLWNLKYILYLNLSSNSF-TGPLPLE 236
GN + F P F LTSL NL +L S+ S + L + LN++ N + LP
Sbjct: 89 GNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAY 148
Query: 237 IGNLRVLVQIDLSMNNFSGFIPT-TIGDLKDLQ 268
NL LV +DLS N +I T T+ DL+ L+
Sbjct: 149 FSNLTNLVHVDLSYN----YIQTITVNDLQFLR 177
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN- 495
+G V + Y A + + + Q + K E +MK + H+N+I +++ +
Sbjct: 36 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQ 95
Query: 496 ---DDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
++F+ LV+E M +L + + LD + ++ + +++LH S II
Sbjct: 96 KTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGII 148
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAK 576
IM + A++YLH S+ I H D+KP N+L N + L+DFG AK
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 30/176 (17%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSND 496
+G V + Y A ++ + + Q + K E +MK + H+N+I +++
Sbjct: 36 AQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV---- 91
Query: 497 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----------- 545
+ P SLE+ + YI+ N+ + L++ Y
Sbjct: 92 --------FTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 546 --SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S IIH DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 15/172 (8%)
Query: 435 LIGRGGVASVYKARIQDGIEV-AVKVFDLQYEGAFKSFDIECDMM-KRI-----RHRNLI 487
++G+G V + + E+ AVK+ L+ + + D+EC M+ KR+ + L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 84
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
++ S D V+EY+ G L +Y + F+ + + A L F S
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
II+ DLK +NV+LD ++DFGM K + + +T T Y+AP
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAP 190
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN- 495
+G V + Y A + + + Q + K E +MK + H+N+I +++ +
Sbjct: 36 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ 95
Query: 496 ---DDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
++F+ LV+E M +L + + LD + ++ + +++LH S II
Sbjct: 96 KTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQMLXGIKHLH---SAGII 148
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 436 IGRGGVASV----YKARIQDGIEVAVKVF-DLQYEGAFKSFDIECDMMKRIRHRNLIKII 490
IG G V Y + + VA+K + + + F E M++ H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 491 SSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
+ + +++E G L L + LD+ + +++AL YL S +
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H D+ NVL+ L DFG+++ +++ ++ I +MAP
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAP 561
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 15/172 (8%)
Query: 435 LIGRGGVASVYKARIQDGIEV-AVKVFDLQYEGAFKSFDIECDMM-KRI-----RHRNLI 487
++G+G V + + E+ AVK+ L+ + + D+EC M+ KR+ + L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 405
Query: 488 KIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
++ S D V+EY+ G L +Y + F+ + + A L F S
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
II+ DLK +NV+LD ++DFGM K + + +T T Y+AP
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAP 511
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 28/149 (18%)
Query: 180 NKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWN------------LKYILYLNLSSN 227
N+L+ F L+ L+ L+L +N + SIPS +N LK + Y +S
Sbjct: 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY--ISEG 179
Query: 228 SFTGPLPL-----------EIGNLRVLV---QIDLSMNNFSGFIPTTIGDLKDLQYLFLE 273
+F G L EI NL L+ ++DLS N+ S P + L LQ L++
Sbjct: 180 AFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMI 239
Query: 274 YNRLQGSIPDSIGGLIDLKSLDLSNNNIS 302
+++Q ++ L L ++L++NN++
Sbjct: 240 QSQIQVIERNAFDNLQSLVEINLAHNNLT 268
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 190 FGNLTSLRNLYLGSNQLTSIPSTLW-NLKYILYLNLSSNSFTGPLPLEIGNLRVLVQIDL 248
F L +L L L N+LT+IP+ + L + L L +N + L ++DL
Sbjct: 108 FNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167
Query: 249 -SMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLSNNNISGAIPI 307
+ S L +L+YL L L+ IP+ + LI L LDLS N++S P
Sbjct: 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGNHLSAIRPG 225
Query: 308 SLEKLLDLK 316
S + L+ L+
Sbjct: 226 SFQGLMHLQ 234
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Query: 434 NLIGRGGVASVYKARIQDGIE-VAVKVFDLQYEGAFKSFDI--ECDMMKRIRHRNLIKII 490
+LIGRG VY A ++ + VA+K + +E I E ++ R++ +I++
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLY 91
Query: 491 SSCSNDD---FKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV 547
DD F L + S K L+ + L I+ ++ ++H
Sbjct: 92 DLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH---ES 148
Query: 548 PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQS 584
IIH DLKP N LL+ + + DFG+A+ + E +
Sbjct: 149 GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT 185
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 434 NLIGRGGVASVYKA-RIQDGIEVAVKVFDLQYEGAFKSFDIE--------CDMMKRIRHR 484
+IG+G + V + + G + AVK+ D+ + E C M+K H
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK---HP 86
Query: 485 NLIKIISSCSNDDFKALVLEYMPHGSLEKCL-----YSSNYILDIFQRLNIMIDVASALE 539
++++++ + S+D +V E+M L C + ++ + M + AL
Sbjct: 87 HIVELLETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 540 YLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGY 596
Y H IIH D+KP+ VLL +++ L FG+A L + L + T +
Sbjct: 145 YCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRVGTPHF 199
Query: 597 MAP 599
MAP
Sbjct: 200 MAP 202
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 58/149 (38%), Gaps = 46/149 (30%)
Query: 474 ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHG-------------SLEKC------ 514
E +MK++ H N+ ++ ++ + LV+E + HG S KC
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVME-LCHGGHLLDKLNVFIDDSTGKCAMDVVK 136
Query: 515 -----------------LYSSNYILDIFQRL----NIMIDVASALEYLHFGYSVPIIHCD 553
++ LD QR NIM + SAL YLH + I H D
Sbjct: 137 TQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRD 193
Query: 554 LKPNNVLLDDN--MVAHLSDFGMAKPLLK 580
+KP N L N L DFG++K K
Sbjct: 194 IKPENFLFSTNKSFEIKLVDFGLSKEFYK 222
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQT 588
I + + ALE+LH SV IH D+KP+NVL++ + DFG++ L+ + + +
Sbjct: 113 KIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKD 167
Query: 589 QTLATIGYMAP 599
YMAP
Sbjct: 168 IDAGCKPYMAP 178
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Query: 180 NKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWN-LKYILYLNLSSNSFTGPLPLEIG 238
N +S P F NL +LR L L SN+L IP ++ L + L++S N L
Sbjct: 66 NIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQ 125
Query: 239 NLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSIGGLIDLKSLDLSN 298
+L L +++ N+ L L+ L LE L +++ L L L L +
Sbjct: 126 DLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRH 185
Query: 299 NNISGAIPISLEKLLDLKYINVS 321
NI+ S ++L LK + +S
Sbjct: 186 LNINAIRDYSFKRLYRLKVLEIS 208
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 79/159 (49%), Gaps = 8/159 (5%)
Query: 180 NKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWN-LKYILYLNLSSNSFTGPLPLE-I 237
NK+ + F +L +L++L +G N L I ++ L + L L + T +P E +
Sbjct: 114 NKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IPTEAL 172
Query: 238 GNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFL-EYNRLQGSIPDSIGGLIDLKSLDL 296
+L L+ + L N + + L L+ L + + L P+ + GL +L SL +
Sbjct: 173 SHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSI 231
Query: 297 SNNNISGAIPISLEKLLDLKYINVSFN---KLEGEIPRE 332
++ N++ +++ L+ L+++N+S+N +EG + E
Sbjct: 232 THCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHE 270
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 52/134 (38%), Gaps = 20/134 (14%)
Query: 22 LSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLT----------SSTPKLNFLSS--- 68
L LEL N P F NL NL+ L L N L S+ KL+ +
Sbjct: 58 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 117
Query: 69 ------LSNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLT 122
+ LK L +N L I RA L+ S+E + CN++ E +S+L
Sbjct: 118 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN-SLEQLTLEKCNLTSIPTEALSHLH 176
Query: 123 NLTTIYLGGNKLNG 136
L + L +N
Sbjct: 177 GLIVLRLRHLNINA 190
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKEDQSL 585
IM D+ +A+++LH S I H D+KP N+L + + V L+DFG AK + Q+
Sbjct: 132 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ETTQNA 185
Query: 586 TQTQTLATIGYMAP 599
QT T Y+AP
Sbjct: 186 LQTPCY-TPYYVAP 198
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 178 GGNKLSGFVPACFGNLTSLRNLYLGSNQLTSIPSTLWN-LKYILYLNLSSNSFTGPLPLE 236
G N+L F +LT L L LG+NQLT +PS +++ L ++ L + N T LP
Sbjct: 72 GSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRG 130
Query: 237 IGNLRVLVQIDLSMNNFSGFIPTTIGDLKDLQYLFL 272
I L L + L N L L + +L
Sbjct: 131 IERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYL 166
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 10 GTIPSFIFNASKLSRLELEMNSFYGFIPNTFGNLRNLKRLSLNYNYLTSSTPKLNFLSSL 69
++P+ I +++ L L N P F +L NLK L L N L + + SL
Sbjct: 32 ASVPAGIPTNAQI--LYLHDNQITKLEPGVFDSLINLKELYLGSNQLGAL--PVGVFDSL 87
Query: 70 SNCKYLKYLSFSNNSLDGILPRAIGNLSQSMEVFFMFNCNISGSIPEEISNLTNLTTIYL 129
+ L L N L +LP A+ + ++ FM CN +P I LT+LT + L
Sbjct: 88 TQ---LTVLDLGTNQLT-VLPSAVFDRLVHLKELFMC-CNKLTELPRGIERLTHLTHLAL 142
Query: 130 GGNKLNGSIP 139
N+L SIP
Sbjct: 143 DQNQLK-SIP 151
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 248 LSMNNFSGFIPTTIGDLKDLQYLFLEYNRLQGSIPDSI-GGLIDLKSLDLSNNNISGAIP 306
L N + P L +L+ L+L N+L G++P + L L LDL N ++
Sbjct: 47 LHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPS 105
Query: 307 ISLEKLLDLKYINVSFNKLEGEIPR 331
++L+ LK + + NKL E+PR
Sbjct: 106 AVFDRLVHLKELFMCCNKLT-ELPR 129
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 14/173 (8%)
Query: 434 NLIGRGGVASVYKARIQDGIEV-AVKV---FDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+IGRG V ++++ + A+K+ +++ F E D++ + + +
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 155
Query: 490 ISSCSNDDFKALVLEYMPHGSLEKCLYS-SNYILDIFQRLNI--MIDVASALEYLHFGYS 546
+ +++ LV++Y G L L + + + R I M+ ++ LH+
Sbjct: 156 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY--- 212
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+H D+KP+NVLLD N L+DFG + +D ++ + + T Y++P
Sbjct: 213 ---VHRDIKPDNVLLDVNGHIRLADFGSCLK-MNDDGTVQSSVAVGTPDYISP 261
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 529 NIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKEDQSL 585
IM D+ +A+++LH S I H D+KP N+L + + V L+DFG AK + Q+
Sbjct: 113 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ETTQNA 166
Query: 586 TQTQTLATIGYMAP 599
QT T Y+AP
Sbjct: 167 LQTPCY-TPYYVAP 179
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 27/153 (17%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSND 496
+G V + Y A ++ + + Q + K E +MK + H+N+I +++
Sbjct: 38 AQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV---- 93
Query: 497 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----------- 545
+ P SLE+ + YI+ N+ + L++ Y
Sbjct: 94 --------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 143
Query: 546 --SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 576
S IIH DLKP+N+++ + + DFG+A+
Sbjct: 144 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 23/176 (13%)
Query: 435 LIGRGGVASVYKARIQDGI---EVAVKVFDLQYEGAFKSFDI-----ECDMMKRIRHRNL 486
++G+G V K + D I E AVKV + + + K+ D E +++K++ H N+
Sbjct: 29 MLGKGSFGEVLKCK--DRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDHPNI 83
Query: 487 IKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+K+ + +V E G L + + I+ V S + Y+H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMH---K 139
Query: 547 VPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
I+H DLKP N+LL + + + DFG++ Q+ + T Y+AP
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAP 192
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFD--LQYEGAFKSFDIECDMMKRIRHRNLIKII-- 490
+G G SV A + G +VA+K Q E K E ++K ++H N+I ++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 491 ----SSCSN-DDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY 545
SS N DF LV+ +M L+K + F I V L+ L + +
Sbjct: 110 FTPASSLRNFYDF-YLVMPFM-QTDLQKIMGME------FSEEKIQYLVYQMLKGLKYIH 161
Query: 546 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
S ++H DLKP N+ ++++ + DFG+A+ E T + T Y AP
Sbjct: 162 SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAP 210
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 45/211 (21%)
Query: 395 RYRKRGKSQLADANMPLVANLRRFTHLELFQATNGFSENNLIGRGGVASVYKARIQDGIE 454
+ RKRG +AN+ F N ++G G +V G
Sbjct: 4 KKRKRGSRGGKKGRKSRIANIPNFEQ----SLKNLVVSEKILGYGSSGTVVFQGSFQGRP 59
Query: 455 VAVKVFDLQYEGAFKSFDIECDM-MKRIR-------HRNLIKIISSCSNDDFKALVLEYM 506
VAVK + + CD+ + I+ H N+I+ S + D F + LE +
Sbjct: 60 VAVKRMLIDF----------CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE-L 108
Query: 507 PHGSLEKCLYSSNY------ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVL 560
+ +L+ + S N + + ++++ +AS + +LH S+ IIH DLKP N+L
Sbjct: 109 CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNIL 165
Query: 561 LD-------------DNMVAHLSDFGMAKPL 578
+ +N+ +SDFG+ K L
Sbjct: 166 VSTSSRFTADQQTGAENLRILISDFGLCKKL 196
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 29/191 (15%)
Query: 424 FQATNGFSENN----LIGRGGVASVYKARIQDGI---EVAVKVFDLQYEGAFKSFDI--- 473
FQ T F+E ++G+G V K + D I E AVKV + + + K+ D
Sbjct: 16 FQGT--FAERYNIVCMLGKGSFGEVLKCK--DRITQQEYAVKVIN---KASAKNKDTSTI 68
Query: 474 --ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIM 531
E +++K++ H N++K+ + +V E G L + + I+
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARII 127
Query: 532 IDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQT 588
V S + Y+H I+H DLKP N+LL + + + DFG++ Q+
Sbjct: 128 KQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMK 181
Query: 589 QTLATIGYMAP 599
+ T Y+AP
Sbjct: 182 DRIGTAYYIAP 192
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQ-TQTLATIGYMAP 599
H D+KP N+L+ + A+L DFG+A D+ LTQ T+ T+ Y AP
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIAS--ATTDEKLTQLGNTVGTLYYXAP 204
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 14/173 (8%)
Query: 434 NLIGRGGVASVYKARIQDGIEV-AVKV---FDLQYEGAFKSFDIECDMMKRIRHRNLIKI 489
+IGRG V ++++ + A+K+ +++ F E D++ + + +
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 139
Query: 490 ISSCSNDDFKALVLEYMPHGSLEKCLYS-SNYILDIFQRLNI--MIDVASALEYLHFGYS 546
+ +++ LV++Y G L L + + + R I M+ ++ LH+
Sbjct: 140 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY--- 196
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+H D+KP+NVLLD N L+DFG + +D ++ + + T Y++P
Sbjct: 197 ---VHRDIKPDNVLLDVNGHIRLADFGSCLK-MNDDGTVQSSVAVGTPDYISP 245
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 23/173 (13%)
Query: 436 IGRG--GVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G GVA + + + Q VAVK + + E ++ E + +RH N+++
Sbjct: 26 IGSGNFGVARLMRDK-QSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEVI 83
Query: 494 SNDDFKALVLEYMPHGSL-EKCLYSSNYILD----IFQRLNIMIDVASALEYLHFGYSVP 548
A+V+EY G L E+ + + D FQ+L S + Y H ++
Sbjct: 84 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCH---AMQ 134
Query: 549 IIHCDLKPNNVLLDDNMVAHLS--DFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ H DLK N LLD + L DFG +K + Q + T+ T Y+AP
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIAP 184
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 29/191 (15%)
Query: 424 FQATNGFSENN----LIGRGGVASVYKARIQDGI---EVAVKVFDLQYEGAFKSFDI--- 473
FQ T F+E ++G+G V K + D I E AVKV + + + K+ D
Sbjct: 16 FQGT--FAERYNIVCMLGKGSFGEVLKCK--DRITQQEYAVKVIN---KASAKNKDTSTI 68
Query: 474 --ECDMMKRIRHRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIM 531
E +++K++ H N++K+ + +V E G L + + I+
Sbjct: 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARII 127
Query: 532 IDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPLLKEDQSLTQT 588
V S + Y+H I+H DLKP N+LL + + + DFG++ Q+
Sbjct: 128 KQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMK 181
Query: 589 QTLATIGYMAP 599
+ T Y+AP
Sbjct: 182 DRIGTAYYIAP 192
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 436 IGRGGVASVYKA-RIQDGIEVAVKVFDLQYEG---AFKSFDIECDMMKRIRHRNLIKIIS 491
+G G SV A + G VAVK ++ A +++ E ++K ++H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 492 ----SCSNDDFKALVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS 546
+ S ++F + L ++ L + D Q L + + L+Y+H S
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---S 143
Query: 547 VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
IIH DLKP+N+ ++++ + DF +A+ E T +AT Y AP
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRWYRAP 191
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 27/153 (17%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSND 496
+G V + Y A ++ + + Q + K E +MK + H+N+I +++
Sbjct: 36 AQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV---- 91
Query: 497 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----------- 545
+ P SLE+ + YI+ N+ + L++ Y
Sbjct: 92 --------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 546 --SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 576
S IIH DLKP+N+++ + + DFG+A+
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 436 IGRG--GVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSC 493
IG G GVA + + + Q VAVK + + E + E + +RH N+++
Sbjct: 27 IGSGNFGVARLMRDK-QSNELVAVKYIE-RGEKIAANVKREIINHRSLRHPNIVRFKEVI 84
Query: 494 SNDDFKALVLEYMPHGSL-EKCLYSSNYILD----IFQRLNIMIDVASALEYLHFGYSVP 548
A+V+EY G L E+ + + D FQ+L S + Y H ++
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCH---AMQ 135
Query: 549 IIHCDLKPNNVLLDDNMVAHLS--DFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
+ H DLK N LLD + L DFG +K + Q + T+ T Y+AP
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIAP 185
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Query: 425 QATNGFSENNLIGRGGVASVYKARIQDGIE-VAVKVFDLQYEGAFKSFDI--ECDMMKRI 481
+ + + +LIGRG VY A ++ + VA+K + +E I E ++ R+
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 482 RHRNLIKIISSCSNDD---FKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASAL 538
+ +I++ +D F L + S K L+ + L I+ ++
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGE 144
Query: 539 EYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPL 578
+++H IIH DLKP N LL+ + + DFG+A+ +
Sbjct: 145 KFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTI 181
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN- 495
+G V + Y A + + + Q + K E +MK + H+N+I +++ +
Sbjct: 29 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ 88
Query: 496 ---DDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
++F+ LV+E M +L + + LD + ++ + +++LH S II
Sbjct: 89 KTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGII 141
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 142 HRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 187
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 27/153 (17%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSND 496
+G V + Y A ++ + + Q + K E +MK + H+N+I +++
Sbjct: 36 AQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV---- 91
Query: 497 DFKALVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----------- 545
+ P SLE+ + YI+ N+ + L++ Y
Sbjct: 92 --------FTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 546 --SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 576
S IIH DLKP+N+++ + + DFG+A+
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 45/211 (21%)
Query: 395 RYRKRGKSQLADANMPLVANLRRFTHLELFQATNGFSENNLIGRGGVASVYKARIQDGIE 454
+ RKRG +AN+ F N ++G G +V G
Sbjct: 4 KKRKRGSRGGKKGRKSRIANIPNFEQ----SLKNLVVSEKILGYGSSGTVVFQGSFQGRP 59
Query: 455 VAVKVFDLQYEGAFKSFDIECDM-MKRIR-------HRNLIKIISSCSNDDFKALVLEYM 506
VAVK + + CD+ + I+ H N+I+ S + D F + LE +
Sbjct: 60 VAVKRMLIDF----------CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE-L 108
Query: 507 PHGSLEKCLYSSNY------ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVL 560
+ +L+ + S N + + ++++ +AS + +LH S+ IIH DLKP N+L
Sbjct: 109 CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNIL 165
Query: 561 LD-------------DNMVAHLSDFGMAKPL 578
+ +N+ +SDFG+ K L
Sbjct: 166 VSTSSRFTADQQTGAENLRILISDFGLCKKL 196
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 437 GRGGVASVYKARIQDGIEVAVKVFDLQYEGAFKSFDIECDMMKRIRHRNLIKIISSCSN- 495
+G V + Y A + + + Q + K E +MK + H+N+I +++ +
Sbjct: 30 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ 89
Query: 496 ---DDFKA--LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 550
++F+ LV+E M +L + + LD + ++ + +++LH S II
Sbjct: 90 KTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGII 142
Query: 551 HCDLKPNNVLLDDNMVAHLSDFGMAKPLLKEDQSLTQTQTLATIGYMAP 599
H DLKP+N+++ + + DFG+A+ S T + T Y AP
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 188
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 27/139 (19%)
Query: 483 HRNLIKIISSCSNDDFKALVLEYMPHGSLEKCLYSSNY------ILDIFQRLNIMIDVAS 536
H N+I+ S + D F + LE + + +L+ + S N + + ++++ +AS
Sbjct: 68 HPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 537 ALEYLHFGYSVPIIHCDLKPNNVLLD-------------DNMVAHLSDFGMAKPLLKEDQ 583
+ +LH S+ IIH DLKP N+L+ +N+ +SDFG+ K L Q
Sbjct: 127 GVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK-LDSGQ 182
Query: 584 SLTQT---QTLATIGYMAP 599
S +T T G+ AP
Sbjct: 183 SSFRTNLNNPSGTSGWRAP 201
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,489,672
Number of Sequences: 62578
Number of extensions: 672763
Number of successful extensions: 3999
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 344
Number of HSP's that attempted gapping in prelim test: 1711
Number of HSP's gapped (non-prelim): 1613
length of query: 599
length of database: 14,973,337
effective HSP length: 104
effective length of query: 495
effective length of database: 8,465,225
effective search space: 4190286375
effective search space used: 4190286375
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)