Your job contains 1 sequence.
>042904
MGGVGDDTLSEYFFDEGETNLAEDDLFAIFESLDSVTPLDEAATAVSEARLVSQKSTSSS
ILQESDETDQLTETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNEN
LSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYCEVLSPRLVSSP
RPSPLSPRKPPLSPRLNLPISPRTPQPGSPYKPRLQQQGYLSPTKATNNNSVEPSPCSSS
TSSIDSINELVANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHV
NISTVDETMHNSFTIKVTKL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042904
(320 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 407 2.2e-69 3
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 347 2.9e-50 2
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 307 6.8e-49 2
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 262 1.5e-38 2
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 251 6.4e-37 2
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 244 2.4e-35 2
UNIPROTKB|Q8H7N8 - symbol:OJ1217B09.8 "BHLH transcription... 241 2.0e-30 2
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 334 3.0e-30 1
UNIPROTKB|Q7XLY9 - symbol:OSJNBa0086O06.20 "OSJNBa0086O06... 247 6.8e-30 2
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 244 1.8e-29 2
UNIPROTKB|Q6K4B1 - symbol:OJ1595_D08.4 "Os09g0468700 prot... 243 2.9e-29 2
UNIPROTKB|Q6YTU1 - symbol:P0419H09.4 "cDNA clone:002-131-... 243 9.6e-29 2
TAIR|locus:2207061 - symbol:AT1G72210 "AT1G72210" species... 227 5.2e-28 2
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 252 1.2e-26 2
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 242 2.5e-26 2
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 236 8.2e-26 2
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 220 1.8e-23 2
TAIR|locus:2168235 - symbol:AT5G65320 "AT5G65320" species... 204 6.9e-23 2
UNIPROTKB|Q8H8H9 - symbol:OJ1126B12.2 "Helix-loop-helix D... 195 2.3e-20 2
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 120 3.4e-09 2
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 130 7.8e-09 2
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 124 4.5e-08 2
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 131 6.6e-08 2
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 120 1.0e-07 2
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 104 1.5e-07 2
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 120 5.6e-07 2
UNIPROTKB|Q941Z7 - symbol:P0431G06.13-1 "BHLH transcripti... 134 8.1e-07 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 111 1.2e-06 2
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 124 1.4e-06 2
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 121 4.8e-06 2
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 132 8.5e-06 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 122 2.6e-05 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 108 2.7e-05 2
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 121 3.0e-05 2
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 101 3.1e-05 2
TAIR|locus:2205455 - symbol:BIM2 "AT1G69010" species:3702... 121 5.1e-05 1
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 120 6.7e-05 2
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 97 7.1e-05 2
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 121 0.00010 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 123 0.00011 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 104 0.00013 2
UNIPROTKB|Q6Z339 - symbol:B1121A12.20 "Os02g0726700 prote... 118 0.00014 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 100 0.00015 2
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 117 0.00029 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 116 0.00039 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 114 0.00043 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 100 0.00056 2
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 110 0.00066 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 112 0.00077 1
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 113 0.00081 1
TAIR|locus:504956298 - symbol:AT1G62975 "AT1G62975" speci... 109 0.00084 1
TAIR|locus:2012146 - symbol:RGE1 "AT1G49770" species:3702... 110 0.00092 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 107 0.00097 1
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 407 (148.3 bits), Expect = 2.2e-69, Sum P(3) = 2.2e-69
Identities = 85/154 (55%), Positives = 103/154 (66%)
Query: 18 ETNLAEDDLFAIFESLDSVTPLDEAATAVSEARLVSQKSTSSSILQESDETDQLTETLPK 77
+T+LA DDLFAI ESL+ + A + + S K E+ + + L
Sbjct: 16 DTSLAGDDLFAILESLEGAGEISPTAASTPKDGTTSSKELVKDQDYENSSPKRKKQRLET 75
Query: 78 NKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGD 137
K + ++E N DGQQ+MSH+TVERNRRKQMNE+L+VLRSLMPCFYVKRGD
Sbjct: 76 RKEEDEEEEDGDGEAEEDNKQDGQQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGD 135
Query: 138 QASIIGGVVDYINELQQVLQSLEAKKQRKVYCEV 171
QASIIGGVV+YI+ELQQVLQSLEAKKQRK Y EV
Sbjct: 136 QASIIGGVVEYISELQQVLQSLEAKKQRKTYAEV 169
Score = 265 (98.3 bits), Expect = 2.2e-69, Sum P(3) = 2.2e-69
Identities = 55/68 (80%), Positives = 62/68 (91%)
Query: 250 LVANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETM 309
LVANSKSA+ADVEVKFSG N+LLKTVS +IPGQ +KII+ALEDLA EIL VNI+TVDETM
Sbjct: 277 LVANSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDETM 336
Query: 310 HNSFTIKV 317
NSFTIK+
Sbjct: 337 LNSFTIKI 344
Score = 62 (26.9 bits), Expect = 2.2e-69, Sum P(3) = 2.2e-69
Identities = 11/13 (84%), Positives = 12/13 (92%)
Query: 200 ISPRTPQPGSPYK 212
ISPRTPQP SPY+
Sbjct: 210 ISPRTPQPTSPYR 222
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 347 (127.2 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 78/145 (53%), Positives = 91/145 (62%)
Query: 76 PKNKRQKTAATSAVNSSDEA---NNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFY 132
P K+QK +++S+ + + A + DG +MSHITVERNRRKQMNE+L+VLRSLMPCFY
Sbjct: 101 PAQKKQKGSSSSSSSPAALAAAVGDGDGAAKMSHITVERNRRKQMNEHLAVLRSLMPCFY 160
Query: 133 VKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYCEVXXXXXXXXXXXXXXXXXX--- 189
VKRGDQASIIGGVVDYI ELQQVL+SLEAKK RK Y +
Sbjct: 161 VKRGDQASIIGGVVDYIKELQQVLRSLEAKKNRKAYADQVLSPRPSPAAAALMVKPTPPI 220
Query: 190 ---XXXXXXXXXXISPRTPQPGSPY 211
ISPRTP PGSPY
Sbjct: 221 SPRFAAAAAAGVPISPRTPTPGSPY 245
Score = 193 (73.0 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 39/60 (65%), Positives = 49/60 (81%)
Query: 258 IADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHNSFTIKV 317
+ DV V+F+GPNL+LKTVS R PGQA+KII+ALE L+ EILHV+I TVD+ SFTIK+
Sbjct: 336 VPDVRVEFAGPNLVLKTVSHRAPGQALKIIAALESLSLEILHVSICTVDDATVLSFTIKI 395
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 307 (113.1 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 65/92 (70%), Positives = 75/92 (81%)
Query: 79 KRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQ 138
KR+K + + +++D A T + +HI VERNRRKQMNENL+VLRSLMPCFYVKRGDQ
Sbjct: 115 KRRKCCSPES-STTDVAAATT--PKTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQ 171
Query: 139 ASIIGGVVDYINELQQVLQSLEAKKQRKVYCE 170
ASIIGGVVDYI ELQQVL SLEAKKQRKVY +
Sbjct: 172 ASIIGGVVDYIKELQQVLHSLEAKKQRKVYTD 203
Score = 220 (82.5 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 55/128 (42%), Positives = 66/128 (51%)
Query: 200 ISPRTPQ-PGSPYK--------PRLQQQGYLSPTKA-TXXXXXXXXXXXXXXXXXXXXXX 249
ISPRTP PGSPY+ P Y SP T
Sbjct: 249 ISPRTPPTPGSPYRLLRLPPPPPPASGSNYASPAMTPTHHETAAPSLDAIAAELSAYASR 308
Query: 250 LVANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETM 309
+ DV+V+F+G NL+LKTVS R PGQAVKII+ALE + EILH ISTVD+T
Sbjct: 309 QALGGGLLLPDVKVEFAGANLVLKTVSQRSPGQAVKIIAALEGRSLEILHAKISTVDDTA 368
Query: 310 HNSFTIKV 317
NSFT+K+
Sbjct: 369 VNSFTVKI 376
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 262 (97.3 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 58/108 (53%), Positives = 79/108 (73%)
Query: 63 QESDETDQLTETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLS 122
+E E +T+ K+KR K A TS +S+E + QRM+HI VERNRRKQMNE+L
Sbjct: 163 EEDRENKNVTKKEVKSKR-KRARTS--KTSEEVES----QRMTHIAVERNRRKQMNEHLR 215
Query: 123 VLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYCE 170
VLRSLMP YV+RGDQASIIGG ++++ EL+Q+LQ LE++K+R++ E
Sbjct: 216 VLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGE 263
Score = 171 (65.3 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 252 ANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHN 311
A +KS +ADVEVK G + ++K +S R PGQ +K I+ALEDL ILH NI+T+++T+
Sbjct: 309 AENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLY 368
Query: 312 SFTIKVT 318
SF +K+T
Sbjct: 369 SFNVKIT 375
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 251 (93.4 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 47/63 (74%), Positives = 57/63 (90%)
Query: 104 MSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKK 163
MSHI VERNRR+QMNE+L LRSL PCFY+KRGDQASIIGGV+++I ELQQ++Q LE+KK
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 164 QRK 166
+RK
Sbjct: 61 RRK 63
Score = 162 (62.1 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 259 ADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHNSFTIKV 317
A+VE K SG N++L+ VS RI GQ VKIIS LE L+F++LH+NIS+++ET+ F +K+
Sbjct: 115 ANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKI 173
Score = 45 (20.9 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 54 QKSTSSSILQESDETDQLTETLPKNKRQKT 83
Q S +++ E QL + L KR+KT
Sbjct: 35 QASIIGGVIEFIKELQQLVQVLESKKRRKT 64
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 244 (91.0 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 46/63 (73%), Positives = 56/63 (88%)
Query: 104 MSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKK 163
MSHI VERNRR+QMN++L VLRSL P FY+KRGDQASIIGG +D+I ELQ +LQSLEA+K
Sbjct: 1 MSHIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQK 60
Query: 164 QRK 166
+R+
Sbjct: 61 KRR 63
Score = 154 (59.3 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 33/68 (48%), Positives = 48/68 (70%)
Query: 250 LVANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETM 309
L A S +ADVE + SG N+LL+T+S R P V+II+ LE L E+LH+NI+T+D+T+
Sbjct: 129 LAACCNSPMADVEARISGANVLLRTLSRRAP--PVRIIALLESLHLEVLHLNITTMDDTV 186
Query: 310 HNSFTIKV 317
SF +K+
Sbjct: 187 LYSFVLKI 194
>UNIPROTKB|Q8H7N8 [details] [associations]
symbol:OJ1217B09.8 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC121489
EMBL:HQ858866 EMBL:AK107555 RefSeq:NP_001049217.1 UniGene:Os.31303
STRING:Q8H7N8 EnsemblPlants:LOC_Os03g08930.1 GeneID:4331887
KEGG:dosa:Os10t0376900-01 KEGG:osa:4331887 OMA:RIPPLHL
ProtClustDB:CLSN2693619 Uniprot:Q8H7N8
Length = 329
Score = 241 (89.9 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 55/127 (43%), Positives = 76/127 (59%)
Query: 40 DEAATAVSEARLVSQKSTSSSILQESDETDQLTETLPKNKRQKTAATSAVNSSDEANNTD 99
D+ A + V+ K S + + + E + +R K T V + +E
Sbjct: 52 DQLQVASVDEWEVASKDNSDASTEGKAAAAERAEPVAAGRR-KRRRTKVVKNKEEIEC-- 108
Query: 100 GQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSL 159
QRM+HI VERNRR+QMNE L+VLRSLMP Y +RGDQASI+GG ++Y+ EL+Q+LQSL
Sbjct: 109 --QRMTHIAVERNRRRQMNEYLAVLRSLMPASYSQRGDQASIVGGAINYVKELEQLLQSL 166
Query: 160 EAKKQRK 166
E +K K
Sbjct: 167 EVQKSLK 173
Score = 110 (43.8 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 256 SAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHNSFTI 315
+AIAD+EV + LK ++ R P Q +K++ L+ L LH+N++TVD + SF++
Sbjct: 235 AAIADIEVTMVEGHASLKVLARRRPKQLLKLVVGLQQLRIPPLHLNVTTVDAMVLYSFSL 294
Query: 316 KV 317
KV
Sbjct: 295 KV 296
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 92/306 (30%), Positives = 141/306 (46%)
Query: 26 LFAIFESLDSVTPLDEAATAVSEARLVSQKSTSSSILQESDETDQLTETLPKNKRQKTAA 85
++ F + + + L + A A +A ++ +T S E P K+++ A
Sbjct: 18 IYDTFNASAAASFLFDNAAAFCDADILGATATGEKEATSSAAA-AAAEAAPPRKKRRRRA 76
Query: 86 TSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGV 145
S S E T QRM+HI VERNRR+QMNE L++LRSLMP YV+RGDQASI+GG
Sbjct: 77 KSC--KSREETET---QRMTHIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGGA 131
Query: 146 VDYINELQQVLQSLEAKKQ-----RKVYCEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXI 200
++++ EL+Q LQSLEA+K+ K C+
Sbjct: 132 IEFVKELEQQLQSLEAQKRTLLPHHKARCDDATPMHNASGSNVGAGGCMEPTTTTSNCSS 191
Query: 201 SPRTPQPGSPYKPRLQQQGYL------SP---TKATXXXXXXXXXXXXXXXXXXXXXXLV 251
S P + P Q Y SP T T L
Sbjct: 192 SVTEDAPSADAPPFAQFFAYPQYVWCHSPRDSTTTTTAASASASASASSSSPATVAAALQ 251
Query: 252 ANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHN 311
+ +S +AD+EV + ++ +SPR PGQ +K+I+ L+ L +LH+N++T+D +
Sbjct: 252 SEHRSGLADIEVSLVETHASVRVMSPRRPGQLLKMIAGLQALRLTVLHLNVTTLDSLVLY 311
Query: 312 SFTIKV 317
+ ++KV
Sbjct: 312 TLSVKV 317
>UNIPROTKB|Q7XLY9 [details] [associations]
symbol:OSJNBa0086O06.20 "OSJNBa0086O06.20 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL662981 UniGene:Os.52382 HOGENOM:HOG000238962
ProteinModelPortal:Q7XLY9 EnsemblPlants:LOC_Os04g50090.1
Gramene:Q7XLY9 OMA:RFFTYPQ Uniprot:Q7XLY9
Length = 362
Score = 247 (92.0 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 52/99 (52%), Positives = 72/99 (72%)
Query: 67 ETDQLTETLPK-NKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLR 125
E DQL + + +R++ + S ++A + QRM+HI VERNRR+QMNE L+VLR
Sbjct: 61 EVDQLLKQAQQPGRRKRRRRARSCKSREDAES----QRMTHIAVERNRRRQMNEYLAVLR 116
Query: 126 SLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQ 164
SLMP YV RGDQASI+GG +D++ EL+Q+LQSLEA+K+
Sbjct: 117 SLMPESYVHRGDQASIVGGAIDFVKELEQLLQSLEAQKR 155
Score = 99 (39.9 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 17/65 (26%), Positives = 39/65 (60%)
Query: 252 ANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHN 311
A +++ +AD+EV + ++ ++ R PGQ +K+++ L+ L +LH+N++ +
Sbjct: 228 AENRAGVADIEVSLVETHASIRVMAARRPGQLLKMVAGLQALRLTVLHLNVTALGSLALY 287
Query: 312 SFTIK 316
S ++K
Sbjct: 288 SISVK 292
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 244 (91.0 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 49/90 (54%), Positives = 63/90 (70%)
Query: 76 PKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKR 135
P R+K T + +E N QRM+HI VERNRRKQMNE L+VLRSLMP Y +R
Sbjct: 91 PPQHRRKRRRTRNCKNKEEIEN----QRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQR 146
Query: 136 GDQASIIGGVVDYINELQQVLQSLEAKKQR 165
GDQASI+GG ++Y+ EL+ +LQS+E K+ R
Sbjct: 147 GDQASIVGGAINYVKELEHILQSMEPKRTR 176
Score = 98 (39.6 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 19/67 (28%), Positives = 43/67 (64%)
Query: 251 VANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMH 310
V S S+ A++EV + + +K ++ + P Q +K+I++L+ L +LH+N++T+ ++
Sbjct: 211 VPESSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSIL 270
Query: 311 NSFTIKV 317
S +++V
Sbjct: 271 YSISVRV 277
>UNIPROTKB|Q6K4B1 [details] [associations]
symbol:OJ1595_D08.4 "Os09g0468700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 eggNOG:NOG281753 EMBL:AP005399
EMBL:AP005574 RefSeq:NP_001175879.1 UniGene:Os.98668
EnsemblPlants:LOC_Os09g29360.1 GeneID:9267272 KEGG:osa:9267272
Uniprot:Q6K4B1
Length = 351
Score = 243 (90.6 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 51/104 (49%), Positives = 69/104 (66%)
Query: 63 QESDETDQLTETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLS 122
QE T ++ R+K A + +E + QRM+HI VERNRRKQMNE L+
Sbjct: 97 QEDQAAVAAAATAVQSGRRKRRRARAAKNKEEVES----QRMTHIAVERNRRKQMNEYLA 152
Query: 123 VLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRK 166
VLRSLMP Y +RGDQASI+GG ++++ EL+Q+LQSLEA+K +
Sbjct: 153 VLRSLMPPSYAQRGDQASIVGGAINFVKELEQLLQSLEARKSSR 196
Score = 97 (39.2 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 252 ANSK-SAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMH 310
+ SK SA+ADVEV + L+ +S R P Q ++++ AL+ +LH+N+++ +
Sbjct: 253 SGSKPSAVADVEVTMVESHANLRVLSRRRPRQLLRLVVALQGHRLTVLHLNMTSAGHMVL 312
Query: 311 NSFTIKV 317
SF++KV
Sbjct: 313 YSFSLKV 319
>UNIPROTKB|Q6YTU1 [details] [associations]
symbol:P0419H09.4 "cDNA clone:002-131-D10, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP004213
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:HQ858861 EMBL:AP005918 EMBL:AK107626
RefSeq:NP_001062077.1 UniGene:Os.55174
EnsemblPlants:LOC_Os08g37730.1 GeneID:4345867 KEGG:osa:4345867
eggNOG:NOG250596 ProtClustDB:CLSN2919896 Uniprot:Q6YTU1
Length = 363
Score = 243 (90.6 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 62/163 (38%), Positives = 92/163 (56%)
Query: 4 VGDDTLSEYFFDEGETNLAEDDLFAIFESLDSVTPLDEAATAVSEARLVSQKSTSSSILQ 63
V DD + F+D G + + A + D ++V++A + +S++
Sbjct: 50 VVDDGVVNAFWDGGGGGASSSPVMAAVSGF--IEEPDGGNSSVADAAPPPEHG-GASVVG 106
Query: 64 ESDETDQLTETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSV 123
+ KR++ A T V + +E + QRM+HI VERNRRKQMNE L+V
Sbjct: 107 RDGSAAAPAAAAGRRKRRR-ART--VKNREEVES----QRMTHIAVERNRRKQMNEYLAV 159
Query: 124 LRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRK 166
LRSLMP YV+RGDQASIIGG ++Y+ E++Q+LQSLEA + +
Sbjct: 160 LRSLMPASYVQRGDQASIIGGAINYVKEMEQLLQSLEAHRHAR 202
Score = 92 (37.4 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 21/68 (30%), Positives = 40/68 (58%)
Query: 251 VANSK-SAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETM 309
V+ SK S++AD+EV + LK +S R P Q +++++ L+ +LH+N+++
Sbjct: 260 VSGSKPSSVADIEVTMVESHANLKVLSRRRPRQLLRMVAGLQHHRLAVLHLNVASAGHMA 319
Query: 310 HNSFTIKV 317
S ++KV
Sbjct: 320 LYSLSLKV 327
>TAIR|locus:2207061 [details] [associations]
symbol:AT1G72210 "AT1G72210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC067754 HOGENOM:HOG000238962 eggNOG:NOG281753
ProtClustDB:CLSN2679534 EMBL:AJ459771 EMBL:BT003871 EMBL:BT006086
IPI:IPI00538709 PIR:F96745 RefSeq:NP_177366.1 UniGene:At.35130
ProteinModelPortal:Q9C7T4 SMR:Q9C7T4 EnsemblPlants:AT1G72210.1
GeneID:843553 KEGG:ath:AT1G72210 TAIR:At1g72210 InParanoid:Q9C7T4
OMA:PQDPFSY PhylomeDB:Q9C7T4 Genevestigator:Q9C7T4 Uniprot:Q9C7T4
Length = 320
Score = 227 (85.0 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 46/81 (56%), Positives = 60/81 (74%)
Query: 80 RQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQA 139
R+K T + + +E N QRM+HI VERNRRKQMNE L+VLRSLMP +Y +RGDQA
Sbjct: 105 RRKRRRTRSSKNKEEIEN----QRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQA 160
Query: 140 SIIGGVVDYINELQQVLQSLE 160
SI+GG ++Y+ EL+ LQS+E
Sbjct: 161 SIVGGAINYLKELEHHLQSME 181
Score = 101 (40.6 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 19/66 (28%), Positives = 42/66 (63%)
Query: 252 ANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHN 311
A + +A++EV + LK ++ + P Q +K++S+++ L +LH+N++T D+++
Sbjct: 225 AAAAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLY 284
Query: 312 SFTIKV 317
S ++KV
Sbjct: 285 SISVKV 290
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 252 (93.8 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 61/142 (42%), Positives = 87/142 (61%)
Query: 27 FAIFESLDSVTPLDEAATAVSEARLVSQKSTSSSILQESD-ETDQLTET--LPKNKRQKT 83
F E + L + T S++ L + + Q D E D TE + +++K
Sbjct: 39 FTTTEPNQFLQSLLQIQTLESKSCLTLETNIKRDPGQTDDPEKDPRTENGAVTVKEKRKR 98
Query: 84 AATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIG 143
T A + DE N QRM+HI VERNRR+QMNE+L+ LRSLMP +++RGDQASI+G
Sbjct: 99 KRTRAPKNKDEVEN----QRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVG 154
Query: 144 GVVDYINELQQVLQSLEAKKQR 165
G +D+I EL+Q+LQSLEA+K++
Sbjct: 155 GAIDFIKELEQLLQSLEAEKRK 176
Score = 63 (27.2 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 260 DVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHNSFTIKV 317
+VE ++ LK R Q +K I ++E+L ILH+ IS+ + + SF +K+
Sbjct: 223 EVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKM 280
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 242 (90.2 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 49/121 (40%), Positives = 81/121 (66%)
Query: 47 SEARLVSQKSTSSSILQESDETDQLTETLPKN---KRQKTAATSAVNSSDEANNTDGQQR 103
S+A + STSS + S ++ LP+ +++K T +++E N QR
Sbjct: 122 SQANMTLPSSTSSPLSAHSRRKRKINHLLPQEMTREKRKRRKTKPSKNNEEIEN----QR 177
Query: 104 MSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKK 163
++HI VERNRR+QMNE+++ LR+L+P Y++RGDQASI+GG ++Y+ L+Q++QSLE++K
Sbjct: 178 INHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQK 237
Query: 164 Q 164
+
Sbjct: 238 R 238
Score = 70 (29.7 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 255 KSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDET-MHNSF 313
++ I +E ++ LK + GQ +K I +LE L +LH+NI+T + + SF
Sbjct: 270 QTCIPKIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSF 329
Query: 314 TIKV 317
+K+
Sbjct: 330 NLKM 333
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 236 (88.1 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 56/134 (41%), Positives = 79/134 (58%)
Query: 30 FESLDSVTPLDEAATAVSEARLVSQKSTSSSILQESDETDQLTETLPKNKRQKTAATSAV 89
F+SL + PL E +S K+T S I + + + K+++
Sbjct: 25 FKSLVDLEPLPENDVIIS-------KNTISEISNQEPPPQRQPPATNRGKKRRRRKPRVC 77
Query: 90 NSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYI 149
+ +EA N QRM+HI VERNRR+QMN++LSVLRSLMP + +GDQASI+GG +D+I
Sbjct: 78 KNEEEAEN----QRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFI 133
Query: 150 NELQQVLQSLEAKK 163
EL+ L SLEA+K
Sbjct: 134 KELEHKLLSLEAQK 147
Score = 71 (30.1 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 274 TVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHNSFTIKV 317
T++ P Q K++++L+ L+ ILH++++T+D S + KV
Sbjct: 233 TLATTKPPQLSKLVASLQSLSLSILHLSVTTLDNYAIYSISAKV 276
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 220 (82.5 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 45/91 (49%), Positives = 64/91 (70%)
Query: 74 TLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYV 133
T K KR++T T + + QRM+HI VERNRR+QMN +L+ LRS++P Y+
Sbjct: 170 TREKRKRRRTKPTKNIEEIES-------QRMTHIAVERNRRRQMNVHLNSLRSIIPSSYI 222
Query: 134 KRGDQASIIGGVVDYINELQQVLQSLEAKKQ 164
+RGDQASI+GG +D++ L+Q LQSLEA+K+
Sbjct: 223 QRGDQASIVGGAIDFVKILEQQLQSLEAQKR 253
Score = 71 (30.1 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 255 KSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDET-MHNSF 313
+S+ +E ++ LK R GQ ++ I LE L F +LH+NI++ T + SF
Sbjct: 286 QSSKLKIEATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSF 345
Query: 314 TIKV 317
+K+
Sbjct: 346 NLKM 349
>TAIR|locus:2168235 [details] [associations]
symbol:AT5G65320 "AT5G65320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB011479 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 EMBL:AY070095 EMBL:AY096704
EMBL:AF488625 IPI:IPI00548412 RefSeq:NP_201335.1 UniGene:At.28395
ProteinModelPortal:Q9FKQ6 SMR:Q9FKQ6 EnsemblPlants:AT5G65320.1
GeneID:836657 KEGG:ath:AT5G65320 TAIR:At5g65320 eggNOG:NOG237691
InParanoid:Q9FKQ6 OMA:PNDQASI PhylomeDB:Q9FKQ6
ProtClustDB:CLSN2916276 Genevestigator:Q9FKQ6 Uniprot:Q9FKQ6
Length = 296
Score = 204 (76.9 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 56/150 (37%), Positives = 83/150 (55%)
Query: 20 NLAEDDL-FAIFESLDSVTPLDEAATAVSEARLVSQKSTSSSILQES--DETDQLTETL- 75
+L E L + + + ++ + + S+ +S S SS+ L S ++ LTE L
Sbjct: 12 SLVETSLSYEMLDYFQNIV-VSNSEDVASQQNSISSSSYSSATLSCSITEQKSHLTEKLS 70
Query: 76 PKNKRQKTAATSAVNSSDEANNT--DGQ-QRMSHITVERNRRKQMNENLSVLRSLMPCFY 132
P +R + + T D + QRM+HI VERNRRKQMN LS+L+S+MP Y
Sbjct: 71 PLRERYGCGDFLSRKRRRRSEKTIVDKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSY 130
Query: 133 VKRGDQASIIGGVVDYINELQQVLQSLEAK 162
+ DQASII G + Y+ +L+Q LQSLEA+
Sbjct: 131 SQPNDQASIIEGTISYLKKLEQRLQSLEAQ 160
Score = 75 (31.5 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 258 IADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHNSFTIKV 317
+ADVEV + +K ++ P KII+ L LH+N++T + +F++KV
Sbjct: 209 VADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTFSVKV 268
>UNIPROTKB|Q8H8H9 [details] [associations]
symbol:OJ1126B12.2 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC098695
EnsemblPlants:LOC_Os03g03000.1 KEGG:dosa:Os03t0122100-00
OMA:GAIDYVK Uniprot:Q8H8H9
Length = 291
Score = 195 (73.7 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 93 DEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINEL 152
+EA N QRM+HI VERNRR+ MN++L+ LRSL+P Y+ RGDQA+++GG +DY+ +L
Sbjct: 110 EEAEN----QRMTHIAVERNRRRLMNDHLASLRSLIPSNYIPRGDQATVVGGAIDYVKQL 165
Query: 153 QQVLQSLEA 161
+Q L +L+A
Sbjct: 166 EQQLVALQA 174
Score = 71 (30.1 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 17/60 (28%), Positives = 35/60 (58%)
Query: 260 DVEVKFS-GPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVD-ETMHNSFTIKV 317
DVE + G ++ ++ R G+ V+ ++A+EDL +LH+ +++V + + F +KV
Sbjct: 215 DVEATAAVGGHVRVRVAGRRWTGRLVRAVAAMEDLRLTVLHLAVTSVGHDAVVYCFNLKV 274
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 120 (47.3 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 36/151 (23%), Positives = 70/151 (46%)
Query: 13 FFDEGETNLAEDDLFAIFESLDSVTPLDEAATAVSEARLVSQKSTSSSILQESDETDQLT 72
F DEG+ + D + + + + ++E +++S ++ SD +
Sbjct: 369 FGDEGKRSSGNPDPSS-YSGQTQFENKRKRSMVLNEDKVLSFGDKTAGESDHSDLEASVV 427
Query: 73 ETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFY 132
+ + KR K N +E N H+ ER RR+++N+ LR+++P
Sbjct: 428 KEVAVEKRPKKRGRKPANGREEPLN--------HVEAERQRREKLNQRFYALRAVVP--N 477
Query: 133 VKRGDQASIIGGVVDYINELQQVLQSLEAKK 163
V + D+AS++G + YINEL+ + E++K
Sbjct: 478 VSKMDKASLLGDAIAYINELKSKVVKTESEK 508
Score = 87 (35.7 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 260 DVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHNSFTIKV 317
++EVK G + +++ S + A +++SAL DL E+ H ++S V++ M T+K+
Sbjct: 547 EIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKM 604
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 130 (50.8 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 34/145 (23%), Positives = 74/145 (51%)
Query: 24 DDLFAIFESLDSVTPLDEAATAVSEARLVSQKSTSSSILQESDETDQLTETLPKNKRQKT 83
DD+ + E+++ V + T + A S++ S + ++++ TE P +
Sbjct: 310 DDV-KVLENVNMVVDNNNYKTQIEFAGSSVAASSNPSTNTQQEKSESCTEKRPVSLLAGA 368
Query: 84 AATSAVNSSDEANN----TDGQQR-MSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQ 138
S V+ +G++ ++H+ ER RR+++N+ LRS++P + + D+
Sbjct: 369 GIVSVVDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVP--NISKMDK 426
Query: 139 ASIIGGVVDYINELQQVLQSLEAKK 163
AS++G + YI ELQ+ ++ +E ++
Sbjct: 427 ASLLGDAISYIKELQEKVKIMEDER 451
Score = 71 (30.1 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 13/57 (22%), Positives = 32/57 (56%)
Query: 260 DVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHNSFTIK 316
+V+++ ++++ +SP A +II A+ + ++ +S ++TM ++F IK
Sbjct: 471 EVDIQAMNEEVVVRVISPLDSHPASRIIQAMRNSNVSLMEAKLSLAEDTMFHTFVIK 527
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 124 (48.7 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 23/64 (35%), Positives = 43/64 (67%)
Query: 101 QQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLE 160
++ ++H+ ER RR+++N+ LR+++P V + D+AS++G + YINEL+ LQ E
Sbjct: 411 EEPLNHVEAERQRREKLNQRFYSLRAVVP--NVSKMDKASLLGDAISYINELKSKLQQAE 468
Query: 161 AKKQ 164
+ K+
Sbjct: 469 SDKE 472
Score = 71 (30.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 14/66 (21%), Positives = 36/66 (54%)
Query: 252 ANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHN 311
+ + S +++VK G +++++ + + + AL++L E+ H ++S V++ M
Sbjct: 505 STASSIEMEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQ 564
Query: 312 SFTIKV 317
T+K+
Sbjct: 565 QATVKM 570
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 131 (51.2 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 35/142 (24%), Positives = 67/142 (47%)
Query: 27 FAIFESLDSVTPLDEAATAVSEARLVSQKSTSSS-ILQESDETDQLTETLPKNKR--QKT 83
F F ++ L A A ++ V Q S SSS +L + + T TL + R Q+
Sbjct: 206 FPAFGGSSALPSLAFGAVATTKKEQVQQPSPSSSNVLSFAGQVQGSTTTLDFSGRGWQQD 265
Query: 84 AATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIG 143
E + H+ ER RR+++ + L +++P +K+ D+ S++G
Sbjct: 266 DGVGVFQQPPERRSRPPANAQEHVIAERKRREKLQQQFVALATIVPG--LKKTDKISLLG 323
Query: 144 GVVDYINELQQVLQSLEAKKQR 165
+DY+ +L++ +++LE +R
Sbjct: 324 STIDYVKQLEEKVKALEEGSRR 345
Score = 58 (25.5 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 253 NSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNIST-VDETMHN 311
+S S+ VE G +LLK G V I+S LE I++ ++ D ++
Sbjct: 377 SSSSSSPTVEASIHGNTVLLKICCKERRGLLVMILSELEKQGLSIINTSVVPFTDSCLNI 436
Query: 312 SFTIK 316
+ T K
Sbjct: 437 TITAK 441
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 120 (47.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 32/106 (30%), Positives = 58/106 (54%)
Query: 59 SSILQESDETDQLTETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMN 118
+S+ +E++ + E P+ K +K A N +E N H+ ER RR+++N
Sbjct: 381 ASVAKEAESNRVVVE--PEKKPRKRGRKPA-NGREEPLN--------HVEAERQRREKLN 429
Query: 119 ENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQ 164
+ LR+++P V + D+AS++G + YI+EL+ LQ E+ K+
Sbjct: 430 QRFYSLRAVVP--NVSKMDKASLLGDAISYISELKSKLQKAESDKE 473
Score = 72 (30.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 17/68 (25%), Positives = 37/68 (54%)
Query: 253 NSKSAIA---DVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETM 309
N +S++ +V+VK G + +++ + K + AL++L E+ H ++S V++ M
Sbjct: 500 NQESSVLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLM 559
Query: 310 HNSFTIKV 317
T+K+
Sbjct: 560 IQQATVKM 567
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 104 (41.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 24/92 (26%), Positives = 48/92 (52%)
Query: 75 LPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVK 134
LP++K+ + + + Q HI ER RR+++ + L +L+P +K
Sbjct: 98 LPEHKKAELIIRGTKRAQSLTRSQSNAQ--DHILAERKRREKLTQRFVALSALIPG--LK 153
Query: 135 RGDQASIIGGVVDYINELQQVLQSLEAKKQRK 166
+ D+AS++G + +I LQ+ ++ E +K+ K
Sbjct: 154 KMDKASVLGDAIKHIKYLQESVKEYEEQKKEK 185
Score = 80 (33.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 253 NSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNI 302
+S S + ++EV+ SG ++L+K + + G +KI+ +E L I + N+
Sbjct: 218 SSSSNLPEIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNV 267
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 120 (47.3 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 22/55 (40%), Positives = 40/55 (72%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLE 160
++ ER RRK++N+ LS+LRS++P + + D+ SI+G +DY+ EL + +++LE
Sbjct: 183 NLMAERRRRKRLNDRLSMLRSIVP--KISKMDRTSILGDTIDYVKELTERIKTLE 235
Score = 61 (26.5 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 250 LVANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEI 297
LV NS DVE + SG N ++ P PG + +SALE L EI
Sbjct: 263 LVRNSTKF--DVENRGSG-NTRIEICCPANPGVLLSTVSALEVLGLEI 307
>UNIPROTKB|Q941Z7 [details] [associations]
symbol:P0431G06.13-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634
GO:GO:0003677 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
OMA:HNASERE EMBL:AP003683 STRING:Q941Z7
EnsemblPlants:LOC_Os01g72370.1 EnsemblPlants:LOC_Os01g72370.2
Uniprot:Q941Z7
Length = 248
Score = 134 (52.2 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 40/128 (31%), Positives = 69/128 (53%)
Query: 39 LDEAATAVSEARLVSQKSTSSSILQESDETD-QLTETLPKNKRQKTAATSAVNSSDEANN 97
+D+ A A S + L + + + L S D L + + T A +AV+S +
Sbjct: 6 VDDPAFASSMSSLEADIFSGAGQLPSSPWLDLDLDDDVQDLSMAPTTA-NAVSSGYGSGG 64
Query: 98 TDGQQRMSHITVERNRRKQMNENLSVLRSLMP-CFYVKRGDQASIIGGVVDYINELQQVL 156
+ +++SH ER+RRKQ+NE S LR+L+P + K+ + + V+ YI ELQ+ +
Sbjct: 65 SGSHRKLSHNAYERDRRKQLNELYSSLRALLPDADHTKKLSIPTTVSRVLKYIPELQKQV 124
Query: 157 QSLEAKKQ 164
++LE KK+
Sbjct: 125 ENLERKKK 132
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 111 (44.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 101 QQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLE 160
+Q+ ++ ER RRK++N +L LRSL+P + + D+ASI+G +DYI LQ+ ++ L+
Sbjct: 281 RQQCKNLEAERKRRKKLNGHLYKLRSLVP--NITKMDRASILGDAIDYIVGLQKQVKELQ 338
Score = 71 (30.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 261 VEVK-FSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHNSFTIKV 317
+EV+ G L ++ + PG V+++ A+ L E+++VN++T + N F + V
Sbjct: 418 LEVRQVQGNELFVQVLWEHKPGGFVRLMDAMNALGLEVINVNVTTYKTLVLNVFRVMV 475
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 124 (48.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 42/152 (27%), Positives = 74/152 (48%)
Query: 12 YFFDEGETNLAEDDLFAIFESLDSVTPLDEAATAVSEARLVSQKSTSSS--ILQESDETD 69
Y + G + + F E D + + E + V+E ++V+ K + + + SD +D
Sbjct: 235 YLPENGNKEMMGMNPFNTVEE-DGIPVIGEPSLLVNEQQVVNDKDMNENGRVDSGSDCSD 293
Query: 70 QLT-ETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLM 128
Q+ E PK K++ + A N + ER RRK++N+ L LRSL+
Sbjct: 294 QIDDEDDPKYKKKSGKGSQAKN----------------LMAERRRRKKLNDRLYALRSLV 337
Query: 129 PCFYVKRGDQASIIGGVVDYINELQQVLQSLE 160
P + + D+ASI+G ++Y+ ELQ + L+
Sbjct: 338 P--RITKLDRASILGDAINYVKELQNEAKELQ 367
Score = 56 (24.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 13/57 (22%), Positives = 27/57 (47%)
Query: 261 VEV-KFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHNSFTIK 316
V+V + G +K + PG +++ AL+ L E+ + N + + N F ++
Sbjct: 430 VDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVE 486
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 121 (47.7 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 33/113 (29%), Positives = 57/113 (50%)
Query: 53 SQKSTSSSILQESDE-TDQLTETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVER 111
S S IL S E T+ + + ++K + N +GQ ++ ER
Sbjct: 101 SSYSPPPLILPASQENTNNYSPLMEESK--SFISIGETNKKRSNKKLEGQPS-KNLMAER 157
Query: 112 NRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQ 164
RRK++N+ LS+LRS++P + + D+ SI+G +DY+ EL + L+ +Q
Sbjct: 158 RRRKRLNDRLSLLRSIVP--KITKMDRTSILGDAIDYMKELLDKINKLQEDEQ 208
Score = 46 (21.3 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 277 PRIPGQAVKIISALEDLAFEILHVNIS 303
P PG V +S LE L EI IS
Sbjct: 248 PTKPGLVVSTVSTLETLGLEIEQCVIS 274
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 132 (51.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 25/67 (37%), Positives = 45/67 (67%)
Query: 102 QRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEA 161
+ ++H+ ER RR+++N+ LRS++P + + D+AS++G V YINEL L+ +EA
Sbjct: 430 EALNHVEAERQRREKLNQRFYALRSVVP--NISKMDKASLLGDAVSYINELHAKLKVMEA 487
Query: 162 KKQRKVY 168
+++R Y
Sbjct: 488 ERERLGY 494
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 122 (48.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 32/113 (28%), Positives = 57/113 (50%)
Query: 55 KSTSSSILQESDETDQLT-ETLPKNKRQKTAATSAVNSSD-EANNTDGQQRMSHITVERN 112
K ++S L + + + + +P+N T T + G + H+ ER
Sbjct: 42 KDAAASALAAAAASQSASNDDVPRNPPATTTTTKRRGRKPGPRSGGGGAPPIGHVEAERQ 101
Query: 113 RRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQR 165
RR+++N LR+ +P V R D+AS++ VDYI EL++ ++ LEA+ +R
Sbjct: 102 RREKLNRRFCELRAAVPT--VSRMDKASLLADAVDYIAELRRRVERLEAEARR 152
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 108 (43.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 26/92 (28%), Positives = 50/92 (54%)
Query: 77 KNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRG 136
+ +R+K T ++ E ++ +SH+ E+ RR+++N LR+++P V R
Sbjct: 224 RKRRRKLETTRVAAATKEKHHP---AVLSHVEAEKQRREKLNHRFYALRAIVP--KVSRM 278
Query: 137 DQASIIGGVVDYINELQQVLQSLEAK-KQRKV 167
D+AS++ V YI L+ + LE + K+ K+
Sbjct: 279 DKASLLSDAVSYIESLKSKIDDLETEIKKMKM 310
Score = 58 (25.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 12/65 (18%), Positives = 31/65 (47%)
Query: 253 NSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHNS 312
+++ + +V+VK G +++ + + ++SAL ++ + H N S + + M
Sbjct: 339 SNRGSDLEVQVKIVGEEAIIRVQTENVNHPTSALMSALMEMDCRVQHANASRLSQVMVQD 398
Query: 313 FTIKV 317
+ V
Sbjct: 399 VVVLV 403
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 121 (47.7 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 53 SQKSTSSSILQESDE---TDQLTETLPKNKRQKTAATSAVNSSDEANNTDGQ----QRMS 105
S S+ ILQ E + ++ P + ++ + S E N + Q
Sbjct: 119 SSSSSPPLILQNGQEENFNNPMSYPSPLMESDQSKSFSVGYCGGETNKKKSKKLEGQPSK 178
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQ 164
++ ER RRK++N+ LS+LRS++P + + D+ SI+G +DY+ EL + L+ ++Q
Sbjct: 179 NLMAERRRRKRLNDRLSMLRSIVP--KISKMDRTSILGDAIDYMKELLDKINKLQDEEQ 235
Score = 40 (19.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 276 SPRIPGQAVKIISALEDLAFEILHVNIS 303
SP+ PG + ++ LE L EI IS
Sbjct: 284 SPK-PGLLLSTVNTLETLGLEIEQCVIS 310
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 101 (40.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 76 PKNKRQKTAATSAVNSSDEANNTDGQQ-RMSHITVERNRRKQMNENLSVLRSLMPCFYVK 134
P Q A+S N + ++ HI ER RR+++N+ L +++P +K
Sbjct: 162 PSPSAQTRRASSKGNGGGGSGSSSAAPYAQEHIIAERKRREKINQRFIELSTVIPG--LK 219
Query: 135 RGDQASIIGGVVDYINELQQVLQSLE 160
+ D+A+I+ V Y+ E+Q+ L LE
Sbjct: 220 KMDKATILSDAVRYVKEMQEKLSELE 245
Score = 63 (27.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 13/50 (26%), Positives = 29/50 (58%)
Query: 254 SKSAIADVEVKFSGPNLLLKTVSPRI-PGQAVKIISALEDLAFEILHVNI 302
++S++ ++E K S N++++ G V++++A+E L I H N+
Sbjct: 288 ARSSLPEIEAKISHGNVMVRIHGENNGKGSLVRLLAAVEGLHLGITHTNV 337
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 121 (47.7 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 31/97 (31%), Positives = 51/97 (52%)
Query: 66 DETDQLTETLPKNKRQKTAATSAVNSSDEANNTDGQQ--RMSHITVERNRRKQMNENLSV 123
+E D E +KR+ ++ + V+S+ ++ D R H E+ RR ++NE +
Sbjct: 9 EEEDYGEEDF-NSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKINERFQI 67
Query: 124 LRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLE 160
LR L+P KR D AS + V+DY+ LQ+ +Q E
Sbjct: 68 LRELIPNSEQKR-DTASFLLEVIDYVQYLQEKVQKYE 103
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 120 (47.3 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 22/60 (36%), Positives = 40/60 (66%)
Query: 101 QQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLE 160
++ +SH+ ER RR+++NE LRS++P +V + D+ SI+G + Y+N L++ + LE
Sbjct: 359 REDLSHVVAERRRREKLNEKFITLRSMVP--FVTKMDKVSILGDTIAYVNHLRKRVHELE 416
Score = 43 (20.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 260 DVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHNSFTIKV 317
+VEV ++LL+ G + I+ L +L E V+ S D KV
Sbjct: 437 EVEVSIIENDVLLEMRCEYRDGLLLDILQVLHELGIETTAVHTSVNDHDFEAEIRAKV 494
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 97 (39.2 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEA-KKQ 164
HI ER RR+++ + L +L+P +K+ D+AS++G + +I LQ+ + LE KK+
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPG--LKKMDKASVLGDALKHIKYLQERVGELEEQKKE 210
Query: 165 RKV 167
R++
Sbjct: 211 RRL 213
Score = 63 (27.2 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 258 IADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVD 306
+ ++EV+FS ++L+K + + G KI++ +E L IL N S ++
Sbjct: 246 LPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKL--HILITNSSVLN 292
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 36/141 (25%), Positives = 67/141 (47%)
Query: 29 IFESLDSVTPLDEAATAVSEARLVSQKSTSSSILQESDETDQLTETLPKNKRQ------K 82
+F+ L S P E++ +S R K S S + S E ++ ++ PK ++ K
Sbjct: 186 VFKPLASHVPAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDK 245
Query: 83 TAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMP-CFYVKRGDQASI 141
T + GQ SH ER RR++++E + +L+ L+P C V +A +
Sbjct: 246 TKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT--GKALM 303
Query: 142 IGGVVDYINELQQVLQSLEAK 162
+ +++Y+ LQ+ ++ L K
Sbjct: 304 LDEIINYVQSLQRQVEFLSMK 324
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 23/64 (35%), Positives = 43/64 (67%)
Query: 101 QQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLE 160
++ ++H+ ER RR+++N+ LR+++P V + D+AS++G + YINEL+ L +LE
Sbjct: 520 EEPLNHVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAISYINELRGKLTALE 577
Query: 161 AKKQ 164
K+
Sbjct: 578 TDKE 581
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 104 (41.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLE 160
HI ER RR+++N+ L +++P +K+ D+A+I+G V Y+ ELQ+ +++LE
Sbjct: 168 HIIAERRRREKINQRFIELSTVIPG--LKKMDKATILGDAVKYVKELQEKVKTLE 220
Score = 53 (23.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 253 NSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVD-ETMHN 311
+ + + ++EV+ ++L++ G V+++S +E+L I H ++ T+
Sbjct: 249 DGEGRVPEIEVRVWERSVLVRVQCGNSRGLLVRLLSEVEELRLGITHTSVMPFPASTVII 308
Query: 312 SFTIKVTKL 320
+ T K + L
Sbjct: 309 TITAKASSL 317
>UNIPROTKB|Q6Z339 [details] [associations]
symbol:B1121A12.20 "Os02g0726700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
EMBL:AP008208 EMBL:AP005284 RefSeq:NP_001047993.1 UniGene:Os.52592
GeneID:4330593 KEGG:osa:4330593 ProtClustDB:CLSN2919237
Uniprot:Q6Z339
Length = 344
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 31/108 (28%), Positives = 55/108 (50%)
Query: 53 SQKSTSSSILQESDETDQLTETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERN 112
S+ + S + + DQ + + + S+ +S+D+ +T R H E+
Sbjct: 100 SRAHRAPSTMWQDSAIDQRSIGQTPYEATRAEGRSSASSADQGPSTP---RSKHSATEQR 156
Query: 113 RRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLE 160
RR ++N+ L +LR L+P KR D+AS + V++YI LQ+ +Q E
Sbjct: 157 RRTKINDRLEILRELLPHTDQKR-DKASFLSEVIEYIRFLQEKVQKYE 203
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 100 (40.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/127 (22%), Positives = 61/127 (48%)
Query: 43 ATAVSEARLVSQKSTSSSILQ--ESDETDQLTETLPKNKRQKTAATSAVNSSDEANNTDG 100
+T+ S + S S +S ++ D ET Q + + + N G
Sbjct: 64 STSSSPSSSSSSGSRTSQVISFGSPDTKTNPVETSLNFSNQVSMDQKVGSKRKDCVNNGG 123
Query: 101 QQR----MSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVL 156
++ H+ ER RR+++NE L L +L+P +K+ D+A+++ + ++ +LQ+ +
Sbjct: 124 RREPHLLKEHVLAERKRRQKLNERLIALSALLPG--LKKTDKATVLEDAIKHLKQLQERV 181
Query: 157 QSLEAKK 163
+ LE ++
Sbjct: 182 KKLEEER 188
Score = 56 (24.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 255 KSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILH 299
K + +E + S +LL++ + G +KI+S+LE E+++
Sbjct: 236 KQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVN 280
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 37 TPLDEAATAVSEARLVSQKSTSSSILQ-----ESDETDQ--LTETLPKNKRQKTAATSA- 88
T +D+A A A S + + SS + +SDE L P K K A A
Sbjct: 162 TDVDDAVVAALGAIDGSCRPSPSSFVAWKRTPDSDEVQAVPLISGEPPQKLLKKAVAGAG 221
Query: 89 --VNSSDEAN---NTD-GQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASII 142
+N++D + TD G +H+ ER RR+++ E +L+S++P + + D+ASI+
Sbjct: 222 AWMNNADGSAATMTTDQGSSIKNHVMSERRRREKLKEMFLILKSVVPSIH--KVDKASIL 279
Query: 143 GGVVDYINELQQVLQSLEAKKQ 164
+ Y+ EL++ ++ LE+ Q
Sbjct: 280 AETIAYLKELEKRVEELESSSQ 301
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
Identities = 31/102 (30%), Positives = 54/102 (52%)
Query: 63 QESDETDQLTETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLS 122
Q DET LT+ KR + A N +EA N H+ ER RR+++N+
Sbjct: 290 QGKDETLYLTDEQKPRKRGRKPA----NGREEALN--------HVEAERQRREKLNQRFY 337
Query: 123 VLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQ 164
LR+++P + + D+AS++ + YI ++Q+ ++ E +KQ
Sbjct: 338 ALRAVVP--NISKMDKASLLADAITYITDMQKKIRVYETEKQ 377
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 114 (45.2 bits), Expect = 0.00043, P = 0.00043
Identities = 28/114 (24%), Positives = 55/114 (48%)
Query: 58 SSSILQESDETDQ----LTETLP-KNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERN 112
S++ L+ E D ++ P K A + A + Q HI ER
Sbjct: 129 SAAALKPKQELDAAAAPFSQARPVKRSYDAMVAADVAKAPAAAASRPASQNQEHILAERK 188
Query: 113 RRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRK 166
RR+++++ L ++P +K+ D+AS++G + Y+ +LQ ++ LE + +R+
Sbjct: 189 RREKLSQRFIALSKIVPG--LKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRR 240
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 100 (40.3 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSL 159
+I +ER+RR+++NE L LRS++P + + D+ASII ++YI LQ Q +
Sbjct: 94 NILMERDRRRKLNEKLYALRSVVP--NITKMDKASIIKDAIEYIQRLQAEEQQM 145
Score = 50 (22.7 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 258 IADVEVKFSGPNLLLKTV--SPRIPGQAVKIISALEDLAFEILHVNISTVDET-MHNSF 313
I ++ V G +L+ +V S R A ++ ALE+L ++ NI++V MH F
Sbjct: 219 IQELRVSEVGDRVLVVSVTCSKRRDAMA-RVCRALEELRLRVITANITSVAGCPMHTLF 276
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 110 (43.8 bits), Expect = 0.00066, P = 0.00066
Identities = 27/79 (34%), Positives = 48/79 (60%)
Query: 88 AVNSSDEANNTDGQQRM----SHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIG 143
A + S E+++ DG ++ ERNRR+++N+ L LRS++P + + D+AS+I
Sbjct: 33 AFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVP--NISKLDKASVIK 90
Query: 144 GVVDYINELQQVLQSLEAK 162
+DY+ EL ++LEA+
Sbjct: 91 DSIDYMQELIDQEKTLEAE 109
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 112 (44.5 bits), Expect = 0.00077, P = 0.00077
Identities = 22/60 (36%), Positives = 41/60 (68%)
Query: 105 SHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQ 164
+H+ ER RR+++NE +L+SL+P + + D+ASI+ + Y+ EL++ +Q LE+ K+
Sbjct: 188 NHVMSERRRREKLNEMFLILKSLVPS--IDKVDKASILSETIAYLKELERRVQELESGKK 245
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 113 (44.8 bits), Expect = 0.00081, P = 0.00081
Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 98 TDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQ 157
T G SH+ ER RR+++NE +L+SL+P V++ D+ASI+ + Y+ L++ ++
Sbjct: 371 TPGSNIKSHVMSERRRREKLNEMFLILKSLLPS--VRKVDKASILAETITYLKVLEKRVK 428
Query: 158 SLEAKKQ 164
LE+ +
Sbjct: 429 ELESSSR 435
>TAIR|locus:504956298 [details] [associations]
symbol:AT1G62975 "AT1G62975" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC011000
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000090029 EMBL:AF506369 EMBL:BT006408
EMBL:AK228036 IPI:IPI00535945 PIR:F96654 RefSeq:NP_683462.1
UniGene:At.70486 ProteinModelPortal:Q9LQ08 SMR:Q9LQ08
EnsemblPlants:AT1G62975.1 GeneID:842600 KEGG:ath:AT1G62975
TAIR:At1g62975 eggNOG:NOG241874 InParanoid:Q9LQ08 OMA:YGANEAN
PhylomeDB:Q9LQ08 ProtClustDB:CLSN2690474 Genevestigator:Q9LQ08
Uniprot:Q9LQ08
Length = 259
Score = 109 (43.4 bits), Expect = 0.00084, P = 0.00084
Identities = 33/139 (23%), Positives = 65/139 (46%)
Query: 33 LDSVTPLDEAATAVSEARLVSQKSTSSSIL--QESDETDQLTETLPKNKRQKTAATSAVN 90
+D V L + + L S S + Q +D +T + + ++++
Sbjct: 1 MDCVPSLFMPDSTYEDGLLFSDSFLLSPFISYQNNDVFHSITNKIGGSNKKRSLCDITYG 60
Query: 91 SSDEANNTDGQQ--RMSHITVERNRRKQMNENLSVLRSLMPCFYV--KRGDQASIIGGVV 146
+++ N D ++ +M H +ER RR++++ LR+L+P Y+ KR I+ V
Sbjct: 61 ANEANKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAV- 119
Query: 147 DYINELQQVLQSLEAKKQR 165
+YI +LQ ++ L K+ R
Sbjct: 120 NYIKDLQIKIKELNEKRNR 138
>TAIR|locus:2012146 [details] [associations]
symbol:RGE1 "AT1G49770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009790 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011807 EMBL:AF488623 IPI:IPI00539453 PIR:D96534
RefSeq:NP_175399.2 UniGene:At.38170 ProteinModelPortal:Q9FXA3
SMR:Q9FXA3 EnsemblPlants:AT1G49770.1 GeneID:841400
KEGG:ath:AT1G49770 TAIR:At1g49770 eggNOG:NOG272533
HOGENOM:HOG000272699 InParanoid:Q9FXA3 OMA:DHEIHIW PhylomeDB:Q9FXA3
ProtClustDB:CLSN2918353 Genevestigator:Q9FXA3 Uniprot:Q9FXA3
Length = 308
Score = 110 (43.8 bits), Expect = 0.00093, P = 0.00092
Identities = 32/96 (33%), Positives = 50/96 (52%)
Query: 72 TETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCF 131
T T+ K K++ T + + E + D + HI ER RRK+M + S L +L+P
Sbjct: 47 TTTVKKGKKR----TKRNDKNHEEESPDHE---IHIWTERERRKKMRDMFSKLHALLPQL 99
Query: 132 YVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKV 167
K D+++I+ V I L+Q LQ LE +K K+
Sbjct: 100 PPK-ADKSTIVDEAVSSIKSLEQTLQKLEMQKLEKL 134
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 107 (42.7 bits), Expect = 0.00097, P = 0.00097
Identities = 30/105 (28%), Positives = 49/105 (46%)
Query: 73 ETLPKNKRQKTAATSAVNSSDEANNTD--------GQQRMSHITVERNRRKQMNENLSVL 124
E+ K +R+++ A+N + D GQ SH ER RR+++NE L L
Sbjct: 74 ESGSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCL 133
Query: 125 RSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYC 169
+ L+P Y G A ++ ++DY+ LQ ++ L K C
Sbjct: 134 QDLVPGCYKAMG-MAVMLDVIIDYVRSLQNQIEFLSMKLSAASAC 177
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.127 0.339 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 320 270 0.00097 114 3 11 23 0.42 34
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 53
No. of states in DFA: 565 (60 KB)
Total size of DFA: 155 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.31u 0.11s 26.42t Elapsed: 00:00:01
Total cpu time: 26.31u 0.11s 26.42t Elapsed: 00:00:01
Start: Sat May 11 08:03:17 2013 End: Sat May 11 08:03:18 2013