BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042904
(320 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 282 bits (722), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 180/337 (53%), Positives = 208/337 (61%), Gaps = 32/337 (9%)
Query: 13 FFDEGE---TNLAEDDLFAIFESLDSVTPLDEAATAVSEARLVSQKSTSSSILQESDETD 69
F +E E T+LA DDLFAI ESL+ + A + + S K E+
Sbjct: 8 FLEECEFVDTSLAGDDLFAILESLEGAGEISPTAASTPKDGTTSSKELVKDQDYENSSPK 67
Query: 70 QLTETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMP 129
+ + L K + ++E N DGQQ+MSH+TVERNRRKQMNE+L+VLRSLMP
Sbjct: 68 RKKQRLETRKEEDEEEEDGDGEAEEDNKQDGQQKMSHVTVERNRRKQMNEHLTVLRSLMP 127
Query: 130 CFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYCEVL--SPRLVSSPRPSPLSP 187
CFYVKRGDQASIIGGVV+YI+ELQQVLQSLEAKKQRK Y EVL P P LSP
Sbjct: 128 CFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRVVPSPRPSPPVLSP 187
Query: 188 RKPPLSPRLNL----------PISPRTPQPGSPYKP-----------------RLQQQGY 220
RKPPLSPR+N PISPRTPQP SPY+ L
Sbjct: 188 RKPPLSPRINHHQIHHHLLLPPISPRTPQPTSPYRAIPPQLPLIPQPPLRSYSSLASCSS 247
Query: 221 LSPTKATNNNSVEPSPCSSSTSSIDSINELVANSKSAIADVEVKFSGPNLLLKTVSPRIP 280
L + S SP SS INELVANSKSA+ADVEVKFSG N+LLKTVS +IP
Sbjct: 248 LGDPPPYSPASSSSSPSVSSNHESSVINELVANSKSALADVEVKFSGANVLLKTVSHKIP 307
Query: 281 GQAVKIISALEDLAFEILHVNISTVDETMHNSFTIKV 317
GQ +KII+ALEDLA EIL VNI+TVDETM NSFTIK+
Sbjct: 308 GQVMKIIAALEDLALEILQVNINTVDETMLNSFTIKI 344
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 126/225 (56%), Gaps = 63/225 (28%)
Query: 104 MSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKK 163
MSHI VERNRR+QMNE+L LRSL PCFY+KRGDQASIIGGV+++I ELQQ++Q LE+KK
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 164 QRKVYCEVLSPRLVSSPRPSPLSPRKPPLSPRLNLPISPRTPQPGSPYKPRLQQQGYLSP 223
+RK LN +P PY
Sbjct: 61 RRKT----------------------------LN--------RPSFPY------------ 72
Query: 224 TKATNNNSVEPSPCSSSTSSI-----------DSINELVANSKSAIADVEVKFSGPNLLL 272
++ ++EPS ++T+ + + E+ A S A+VE K SG N++L
Sbjct: 73 ----DHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAKISGSNVVL 128
Query: 273 KTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHNSFTIKV 317
+ VS RI GQ VKIIS LE L+F++LH+NIS+++ET+ F +K+
Sbjct: 129 RVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKI 173
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 142/260 (54%), Gaps = 51/260 (19%)
Query: 63 QESDETDQLTETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLS 122
+E E +T+ K+KR K A TS + E+ QRM+HI VERNRRKQMNE+L
Sbjct: 163 EEDRENKNVTKKEVKSKR-KRARTSKTSEEVES------QRMTHIAVERNRRKQMNEHLR 215
Query: 123 VLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYCE----VLSPRLVS 178
VLRSLMP YV+RGDQASIIGG ++++ EL+Q+LQ LE++K+R++ E + + S
Sbjct: 216 VLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSS 275
Query: 179 SPRPSPLSPRKPPLSPRLNLPISPRTPQPGSPYKPRLQQQGYLSPTKATNNNSVEPSPCS 238
S + ++ + PL N+ L+ G L A N
Sbjct: 276 SSPITTVANQAQPLIITGNV--------------TELEGGGGLREETAEN---------- 311
Query: 239 SSTSSIDSINELVANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEIL 298
KS +ADVEVK G + ++K +S R PGQ +K I+ALEDL IL
Sbjct: 312 ----------------KSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSIL 355
Query: 299 HVNISTVDETMHNSFTIKVT 318
H NI+T+++T+ SF +K+T
Sbjct: 356 HTNITTMEQTVLYSFNVKIT 375
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2
SV=2
Length = 304
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 54/64 (84%)
Query: 102 QRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEA 161
QRM+HI VERNRRKQMNE L+VLRSLMP Y +RGDQASI+GG ++Y+ EL+ +LQS+E
Sbjct: 113 QRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEP 172
Query: 162 KKQR 165
K+ R
Sbjct: 173 KRTR 176
Score = 38.1 bits (87), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 39/59 (66%)
Query: 259 ADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHNSFTIKV 317
A++EV + + +K ++ + P Q +K+I++L+ L +LH+N++T+ ++ S +++V
Sbjct: 219 AEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRV 277
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2
SV=1
Length = 315
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 61/73 (83%), Gaps = 4/73 (5%)
Query: 93 DEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINEL 152
DE N QRM+HI VERNRR+QMNE+L+ LRSLMP +++RGDQASI+GG +D+I EL
Sbjct: 108 DEVEN----QRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKEL 163
Query: 153 QQVLQSLEAKKQR 165
+Q+LQSLEA+K++
Sbjct: 164 EQLLQSLEAEKRK 176
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 51/59 (86%)
Query: 102 QRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLE 160
QRM+HI VERNRRKQMNE L+VLRSLMP +Y +RGDQASI+GG ++Y+ EL+ LQS+E
Sbjct: 123 QRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSME 181
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 42/66 (63%)
Query: 252 ANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHN 311
A + +A++EV + LK ++ + P Q +K++S+++ L +LH+N++T D+++
Sbjct: 225 AAAAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLY 284
Query: 312 SFTIKV 317
S ++KV
Sbjct: 285 SISVKV 290
>sp|Q56XR0|BH071_ARATH Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1
SV=1
Length = 327
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
Query: 93 DEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINEL 152
+EA N QRM+HI VERNRR+QMN++LSVLRSLMP + +GDQASI+GG +D+I EL
Sbjct: 81 EEAEN----QRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKEL 136
Query: 153 QQVLQSLEAKKQR 165
+ L SLEA+K
Sbjct: 137 EHKLLSLEAQKHH 149
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 54/63 (85%)
Query: 102 QRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEA 161
QRM+HI VERNRR+QMN +L+ LRS++P Y++RGDQASI+GG +D++ L+Q LQSLEA
Sbjct: 191 QRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEA 250
Query: 162 KKQ 164
+K+
Sbjct: 251 QKR 253
Score = 31.6 bits (70), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 233 EPSPCSSSTSSIDSINELVANSK---SAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISA 289
E P +S +I S N+L A++K S+ +E ++ LK R GQ ++ I
Sbjct: 262 EQIPEDNSLRNISS-NKLRASNKEEQSSKLKIEATVIESHVNLKIQCTRKQGQLLRSIIL 320
Query: 290 LEDLAFEILHVNIST-VDETMHNSFTIKV 317
LE L F +LH+NI++ + ++ SF +K+
Sbjct: 321 LEKLRFTVLHLNITSPTNTSVSYSFNLKM 349
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2
SV=1
Length = 358
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 56/63 (88%)
Query: 102 QRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEA 161
QR++HI VERNRR+QMNE+++ LR+L+P Y++RGDQASI+GG ++Y+ L+Q++QSLE+
Sbjct: 176 QRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLES 235
Query: 162 KKQ 164
+K+
Sbjct: 236 QKR 238
>sp|Q9FKQ6|BH099_ARATH Transcription factor bHLH99 OS=Arabidopsis thaliana GN=BHLH99 PE=2
SV=1
Length = 296
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 48/61 (78%)
Query: 102 QRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEA 161
QRM+HI VERNRRKQMN LS+L+S+MP Y + DQASII G + Y+ +L+Q LQSLEA
Sbjct: 100 QRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSLEA 159
Query: 162 K 162
+
Sbjct: 160 Q 160
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 257 AIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNISTVDETMHNSFTIK 316
+ADVEV + +K ++ P KII+ L LH+N++T + +F++K
Sbjct: 208 VVADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTFSVK 267
Query: 317 V 317
V
Sbjct: 268 V 268
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 104 MSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKK 163
++H+ ER RR+++N+ LRS++P + + D+AS++G V YINEL L+ +EA++
Sbjct: 432 LNHVEAERQRREKLNQRFYALRSVVP--NISKMDKASLLGDAVSYINELHAKLKVMEAER 489
Query: 164 QRKVY 168
+R Y
Sbjct: 490 ERLGY 494
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 73/258 (28%)
Query: 64 ESDETD---QLTETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNEN 120
ESD +D + + + KR K N +E ++H+ ER RR+++N+
Sbjct: 416 ESDHSDLEASVVKEVAVEKRPKKRGRKPANGREEP--------LNHVEAERQRREKLNQR 467
Query: 121 LSVLRSLMPCFYVKRGDQASIIGGVVDYINELQ-QVLQSLEAKKQRKVYCEVLSPRLVSS 179
LR+++P V + D+AS++G + YINEL+ +V+++ K Q K E + L
Sbjct: 468 FYALRAVVPN--VSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQLEEVKLEL--- 522
Query: 180 PRPSPLSPRKPPLSPRLNLPISPRTPQPGSPYKPRLQQQGYLSPTKATNNNSVEPSPCSS 239
A S SS
Sbjct: 523 ----------------------------------------------AGRKASASGGDMSS 536
Query: 240 STSSIDSINELVANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILH 299
S SSI + ++EVK G + +++ S + A +++SAL DL E+ H
Sbjct: 537 SCSSIKPVG----------MEIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNH 586
Query: 300 VNISTVDETMHNSFTIKV 317
++S V++ M T+K+
Sbjct: 587 ASMSVVNDLMIQQATVKM 604
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 57/214 (26%)
Query: 104 MSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKK 163
++H+ ER RR+++N+ LR+++P V + D+AS++G + YINEL+ LQ E+ K
Sbjct: 414 LNHVEAERQRREKLNQRFYSLRAVVP--NVSKMDKASLLGDAISYINELKSKLQQAESDK 471
Query: 164 QRKVYCEVLSPRLVSSPRPSPLSPRKPPLSPRLNLPISPRTPQPGSPYKPRLQQQGYLSP 223
+ + + +S N GS K R
Sbjct: 472 E-------------------EIQKKLDGMSKEGN-----NGKGCGSRAKER--------- 498
Query: 224 TKATNNNSVEPSPCSSSTSSIDSINELVANSKSAIADVEVKFSGPNLLLKTVSPRIPGQA 283
K++N + S+ SSI+ +++VK G +++++ +
Sbjct: 499 -KSSNQD--------STASSIE-------------MEIDVKIIGWDVMIRVQCGKKDHPG 536
Query: 284 VKIISALEDLAFEILHVNISTVDETMHNSFTIKV 317
+ + AL++L E+ H ++S V++ M T+K+
Sbjct: 537 ARFMEALKELDLEVNHASLSVVNDLMIQQATVKM 570
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 84 AATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIG 143
A S ++ A G +H+ ER RR+++NE VL+SL+P + R ++ASI+
Sbjct: 395 AWESCGGATGAAQEMSGTGTKNHVMSERKRREKLNEMFLVLKSLLPSIH--RVNKASILA 452
Query: 144 GVVDYINELQQVLQSLEAKKQRKVYCEVLSPRLVSSP 180
+ Y+ ELQ+ +Q LE+ ++ + RL++ P
Sbjct: 453 ETIAYLKELQRRVQELESSREPASRPSETTTRLITRP 489
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 104 MSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLE 160
+SH+ ER RR+++NE LRS++P +V + D+ SI+G + Y+N L++ + LE
Sbjct: 362 LSHVVAERRRREKLNEKFITLRSMVP--FVTKMDKVSILGDTIAYVNHLRKRVHELE 416
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 98 TDGQQRMS----HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQ 153
T Q MS H+ ER RR+++NE VL+SL+P + R ++ASI+ + Y+ ELQ
Sbjct: 407 TGAAQEMSATKNHVMSERKRREKLNEMFLVLKSLLPSIH--RVNKASILAETIAYLKELQ 464
Query: 154 QVLQSLEAKKQRKVYCEVLSPRLVSSP 180
+ +Q LE+ ++ + RL++ P
Sbjct: 465 RRVQELESSREPASRPSETTTRLITRP 491
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 58/215 (26%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQR 165
++ ER RRK++N+ L +LRS++P + + D+ASI+G +DY+ EL Q + L +
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHNE--- 362
Query: 166 KVYCEVLSPRLVSSPRPSPLSPRKPPLSPRLNLPISPRTPQPGSPYKPRLQQQGYLSPTK 225
L S+P P L PP S S + P L+PT
Sbjct: 363 ----------LESTP-PGSL----PPTS---------------SSFHP-------LTPTP 385
Query: 226 ATNNNSVEPSPCSSSTSSIDSINELVANSKSAIADVEVKF-SGPNLLLKTVSPRIPGQAV 284
T + V+ C SS S K A VEV+ G + + R PG +
Sbjct: 386 QTLSCRVKEELCPSSLPS----------PKGQQARVEVRLREGRAVNIHMFCGRRPGLLL 435
Query: 285 KIISALEDLAFEILHVNISTVDETMHNSFTIKVTK 319
+ AL++L ++ IS N F + V +
Sbjct: 436 ATMKALDNLGLDVQQAVISCF-----NGFALDVFR 465
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQR 165
++ ER RRK++N+ L +LRS++P + + D+ASI+G +DY+ EL Q + L + +
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHTELES 325
Query: 166 K-VYCEVLSPRLVSSPRPSPLSPR-KPPLSPRLNLPISPRTPQP 207
L P +P P LS R K L P +LP SP+ QP
Sbjct: 326 TPPSSSSLHPL---TPTPQTLSYRVKEELCPSSSLP-SPKGQQP 365
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 14/102 (13%)
Query: 63 QESDETDQLTETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLS 122
Q DET LT+ KR + A N +EA ++H+ ER RR+++N+
Sbjct: 290 QGKDETLYLTDEQKPRKRGRKPA----NGREEA--------LNHVEAERQRREKLNQRFY 337
Query: 123 VLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQ 164
LR+++P + + D+AS++ + YI ++Q+ ++ E +KQ
Sbjct: 338 ALRAVVP--NISKMDKASLLADAITYITDMQKKIRVYETEKQ 377
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 104 MSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKK 163
++H+ ER RR+++N+ LR+++P V + D+AS++G + YI+EL+ LQ E+ K
Sbjct: 415 LNHVEAERQRREKLNQRFYSLRAVVP--NVSKMDKASLLGDAISYISELKSKLQKAESDK 472
Query: 164 Q 164
+
Sbjct: 473 E 473
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 104 MSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKK 163
++H+ ER RR+++N+ LRS++P + + D+AS++G + YI ELQ+ ++ +E ++
Sbjct: 394 LNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDAISYIKELQEKVKIMEDER 451
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1
Length = 311
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 79 KRQKTAATSAVNSSDEANNTDGQQ--RMSHITVERNRRKQMNENLSVLRSLMPCFYVKRG 136
KR+ ++ + V+S+ ++ D R H E+ RR ++NE +LR L+P KR
Sbjct: 21 KREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKINERFQILRELIPNSEQKR- 79
Query: 137 DQASIIGGVVDYINELQQVLQSLEA 161
D AS + V+DY+ LQ+ +Q E
Sbjct: 80 DTASFLLEVIDYVQYLQEKVQKYEG 104
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 100 GQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSL 159
G+++ T ER RR +NE L+ L+P +GD+ASI+ +DYINEL++ + L
Sbjct: 209 GKRKNKPFTTERERRCHLNERYEALKLLIPS--PSKGDRASILQDGIDYINELRRRVSEL 266
Query: 160 EAKKQRK 166
+ +RK
Sbjct: 267 KYLVERK 273
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 76/193 (39%), Gaps = 61/193 (31%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEA-KKQ 164
HI ER RR+++ + L +L+P +K+ D+AS++G + +I LQ+ + LE KK+
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPG--LKKMDKASVLGDALKHIKYLQERVGELEEQKKE 210
Query: 165 RKVYCEVLSPRLVSSPRPSPLSPRKPPLSPRLNLPISPRTPQPGSPYKPRLQQQGYLSPT 224
R++ VL + S
Sbjct: 211 RRLESMVLVKK----------------------------------------------SKL 224
Query: 225 KATNNNSVEPSPCSSSTSSIDSINELVANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAV 284
+NN S C S +D + ++EV+FS ++L+K + + G
Sbjct: 225 ILDDNNQSFSSSCEDGFSDLD------------LPEIEVRFSDEDVLIKILCEKQKGHLA 272
Query: 285 KIISALEDLAFEI 297
KI++ +E L I
Sbjct: 273 KIMAEIEKLHILI 285
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 87/217 (40%), Gaps = 51/217 (23%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQR 165
++ ER RRK++N+ L LRSL+P + + D+ASI+G ++Y+ ELQ + L+ + +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVP--RITKLDRASILGDAINYVKELQNEAKELQDELEE 372
Query: 166 KVYCEVLSPRLVSSPRPSPLSPRKPPLSPRLNLPISPRTPQPGSPYKPRLQQQGYLSPTK 225
E S R PQ G L+ T
Sbjct: 373 NSETEDGSNR-----------------------------PQGGMS----------LNGTV 393
Query: 226 ATNNNSVEPS-PCSSSTSSIDSINELVANSKSAIADVE-----VKFSGPNLLLKTVSPRI 279
T P C+S+ S+ +L NS ++E + G +K +
Sbjct: 394 VT---GFHPGLSCNSNVPSVKQDVDL-ENSNDKGQEMEPQVDVAQLDGREFFVKVICEYK 449
Query: 280 PGQAVKIISALEDLAFEILHVNISTVDETMHNSFTIK 316
PG +++ AL+ L E+ + N + + N F ++
Sbjct: 450 PGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVE 486
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAK 162
+I ERNRR+++N+ L LRS++P + + D+ASII + YI LQ + LEA+
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYIEGLQYEEKKLEAE 110
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 64 ESDETDQLTETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSV 123
E DE D N ++AT+ N TD R + ER RR +M + L
Sbjct: 100 EEDEEDY-------NDGDDSSATTTNNDGTRKTKTD---RSRTLISERRRRGRMKDKLYA 149
Query: 124 LRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEA 161
LRSL+P + + D+ASI+G V Y+ ELQ + L++
Sbjct: 150 LRSLVPN--ITKMDKASIVGDAVLYVQELQSQAKKLKS 185
>sp|Q9FXA3|BH095_ARATH Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2
SV=2
Length = 308
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQR 165
HI ER RRK+M + S L +L+P + D+++I+ V I L+Q LQ LE +K
Sbjct: 74 HIWTERERRKKMRDMFSKLHALLPQL-PPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLE 132
Query: 166 KV 167
K+
Sbjct: 133 KL 134
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAK 162
++ ERNRR+++N+ L LRS++P + + D+AS+I +DY+ EL ++LEA+
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVP--NISKLDKASVIKDSIDYMQELIDQEKTLEAE 109
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
SV=1
Length = 456
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 29 IFESLDSVTPLDEAATAVSEARLVSQKSTSSSILQESDETDQLTETLPKNKRQ------K 82
+F+ L S P E++ +S R K S S + S E ++ ++ PK ++ K
Sbjct: 186 VFKPLASHVPAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDK 245
Query: 83 TAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMP-CFYVKRGDQASI 141
T + GQ SH ER RR++++E + +L+ L+P C V +A +
Sbjct: 246 TKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT--GKALM 303
Query: 142 IGGVVDYINELQQVLQSLEAK 162
+ +++Y+ LQ+ ++ L K
Sbjct: 304 LDEIINYVQSLQRQVEFLSMK 324
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 105 SHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQ 164
+H E+ RR+++NE LRS++P + + D+ SI+ ++Y+ +LQ+ +Q LE+ ++
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPS--ISKIDKVSILDDTIEYLQDLQKRVQELESCRE 462
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 105 SHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQ 164
+H +E+ RR+++NE LR ++P + + D+ SI+ ++Y+ EL++ +Q LE+ ++
Sbjct: 441 NHAVLEKKRREKLNERFMTLRKIIPS--INKIDKVSILDDTIEYLQELERRVQELESCRE 498
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
SV=1
Length = 223
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 100 GQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSL 159
GQ SH ER RR+++NE L L+ L+P Y G A ++ ++DY+ LQ ++ L
Sbjct: 109 GQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMG-MAVMLDVIIDYVRSLQNQIEFL 167
Query: 160 EAKKQRKVYCEVLS 173
K C L+
Sbjct: 168 SMKLSAASACYDLN 181
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 104 MSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLE 160
+SH+ E+ RR+++N LR+++P V R D+AS++ V YI L+ + LE
Sbjct: 248 LSHVEAEKQRREKLNHRFYALRAIVP--KVSRMDKASLLSDAVSYIESLKSKIDDLE 302
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKK 163
H+ ER RR+++NE L L +L+P +K+ D+A+++ + ++ +LQ+ ++ LE ++
Sbjct: 133 HVLAERKRRQKLNERLIALSALLPG--LKKTDKATVLEDAIKHLKQLQERVKKLEEER 188
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSL 159
H ER RR ++N + LR+++P + + D+AS++G V Y NEL++++Q +
Sbjct: 96 HSDAERRRRLRINSQFATLRTILP--NLVKQDKASVLGETVRYFNELKKMVQDI 147
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 104 MSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKK 163
++H+ ER RR+++N LR+++P V + D+ S++ V YINEL+ +++E +K
Sbjct: 342 LNHVEAERMRREKLNHRFYALRAVVPN--VSKMDKTSLLEDAVCYINELKSKAENVELEK 399
Query: 164 Q 164
Sbjct: 400 H 400
>sp|Q9LQ08|BH125_ARATH Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125
PE=2 SV=1
Length = 259
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 79 KRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYV--KRG 136
KR T N +++ ++ ++M H +ER RR++++ LR+L+P Y+ KR
Sbjct: 51 KRSLCDITYGANEANKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRS 110
Query: 137 DQASIIGGVVDYINELQQVLQSLEAKKQR 165
I+ V+YI +LQ ++ L K+ R
Sbjct: 111 TSDHIVQA-VNYIKDLQIKIKELNEKRNR 138
>sp|O75030|MITF_HUMAN Microphthalmia-associated transcription factor OS=Homo sapiens
GN=MITF PE=1 SV=2
Length = 526
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 75 LPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFY-- 132
LP KR+ TA S A + Q++ +H +ER RR +N+ + L +L+P
Sbjct: 285 LPNIKRELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDP 344
Query: 133 VKRGDQASIIGGVVDYINELQQVLQSLEAKKQRK 166
R ++ +I+ VDYI +LQ+ Q + + R+
Sbjct: 345 DMRWNKGTILKASVDYIRKLQREQQRAKELENRQ 378
>sp|Q9FLI0|BH120_ARATH Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120
PE=2 SV=2
Length = 204
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 76 PKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKR 135
P N +KT S + E + T ++++ H +ER RR++M + LRS +P Y+K
Sbjct: 3 PSNNPKKTRHQSHM--PQERDETKKEKKLLHRNIERQRRQEMAILFASLRSQLPLKYIK- 59
Query: 136 GDQA--SIIGGVVDYINELQQVLQSLEAKK 163
G +A + G V +I + Q ++ L A++
Sbjct: 60 GKRAMSDHVNGAVSFIKDTQTRIKDLSARR 89
>sp|Q08874|MITF_MOUSE Microphthalmia-associated transcription factor OS=Mus musculus
GN=Mitf PE=1 SV=3
Length = 526
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 75 LPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFY-- 132
LP KR+ TA S A + Q++ +H +ER RR +N+ + L +L+P
Sbjct: 285 LPNIKRELTACIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDP 344
Query: 133 VKRGDQASIIGGVVDYINEL---QQVLQSLEAKKQR 165
R ++ +I+ VDYI +L QQ + LE ++++
Sbjct: 345 DMRWNKGTILKASVDYIRKLQREQQRAKDLENRQKK 380
>sp|Q9LN95|BH055_ARATH Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2
SV=1
Length = 257
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 80 RQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNENLSVLRSLMPCFYVK-RGDQ 138
RQ T ++ + ++ +R H +ER RR++ +LR L+P Y+K +
Sbjct: 53 RQNCETTMTLSEIMKGDDEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSS 112
Query: 139 ASIIGGVVDYINELQQVLQSLEAKKQR 165
A + V+YI +LQ+ ++ + K+ R
Sbjct: 113 ADHVLEAVNYIKDLQKKIKEVSEKRDR 139
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQ 164
H+ ER RR++++E L +L+P +K+ D+ +I+ + + +LQ+ L++L+ +K+
Sbjct: 120 HVLAERKRREKLSEKFIALSALLP--GLKKADKVTILDDAISRMKQLQEQLRTLKEEKE 176
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 39.3 bits (90), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 63/118 (53%), Gaps = 9/118 (7%)
Query: 44 TAVSEARLVSQKSTSSSILQESDETDQLTETLPKNKRQKTAATSAVNSSDEANNTDGQQR 103
TA +++ + + T Q + ETD +T+ + R++T + ++EA ++ +R
Sbjct: 219 TAGTQSWGLCKAETEPVQRQPATETD-ITDERKRKTREETNVEN--QGTEEARDSTSSKR 275
Query: 104 ----MSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQ 157
+ H ER RR+++NE + L+ L+P + D++S++ V++Y+ LQ +Q
Sbjct: 276 SRAAIMHKLSERRRRQKINEMMKALQELLP--RCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 38.9 bits (89), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQ 154
HI ER RR+++ + L +L+P K+ D+AS++G + +I LQ+
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGL--KKMDKASVLGDAIKHIKYLQE 173
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 260 DVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLAFEILHVNI 302
++EV+ SG ++L+K + + G +KI+ +E L I + N+
Sbjct: 225 EIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNV 267
>sp|Q9D489|SOLH2_MOUSE Spermatogenesis- and oogenesis-specific basic
helix-loop-helix-containing protein 2 OS=Mus musculus
GN=Sohlh2 PE=1 SV=2
Length = 467
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 48 EARLVSQKSTSSSILQESDETDQLTETLPKNKRQKTAA-TSAVNSSDEANNTDGQQRMSH 106
E RL Q S S + S + +E L + R A S+++ S +A+ H
Sbjct: 153 ECRLYFQTSRSELGGRFSTDMFLCSELLKNDARLGLKAPLSSLDKSKQAS-------FLH 205
Query: 107 ITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVL 156
T E+ RR+++ LR+L+P ++ D AS+I VDY+ ++++ L
Sbjct: 206 STKEKLRRERIKSCCEQLRTLLPYVKGRKSDVASVIEATVDYVKQVRESL 255
>sp|P17106|CBF1_YEAST Centromere-binding protein 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CBF1 PE=1 SV=2
Length = 351
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 101 QQRMSHITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQV 155
Q++ SH VER RR+ +N ++VL L+P V+ +A+I+ +YI +L++
Sbjct: 222 QRKDSHKEVERRRRENINTAINVLSDLLP---VRESSKAAILACAAEYIQKLKET 273
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQR 165
++ ER RRK++N+ LS+LRS++P + + D+ SI+G +DY+ EL + L+ ++Q
Sbjct: 179 NLMAERRRRKRLNDRLSMLRSIVP--KISKMDRTSILGDAIDYMKELLDKINKLQDEEQE 236
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQ 164
++ ER RRK++N+ LS+LRS++P + + D+ SI+G +DY+ EL + L+ +Q
Sbjct: 152 NLMAERRRRKRLNDRLSLLRSIVP--KITKMDRTSILGDAIDYMKELLDKINKLQEDEQ 208
>sp|Q3MHT3|SOLH2_RAT Spermatogenesis- and oogenesis-specific basic
helix-loop-helix-containing protein 2 OS=Rattus
norvegicus GN=Sohlh2 PE=2 SV=1
Length = 462
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 106 HITVERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQ---------QVL 156
H + E+ RR+++ LR+L+P ++ D AS+I VDY+ +++ Q+
Sbjct: 205 HSSKEKLRRERIKFCCEQLRTLLPYVKGRKSDVASVIEATVDYVKQVRESLSPAIMAQIT 264
Query: 157 QSLEAKK---QRKVYCEVLSPRLVSSPR 181
+SL++ K +R++ E+ P +S R
Sbjct: 265 ESLQSNKRFSKRQMPIELFLPCTATSQR 292
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.126 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,410,921
Number of Sequences: 539616
Number of extensions: 4502304
Number of successful extensions: 24267
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 435
Number of HSP's that attempted gapping in prelim test: 22807
Number of HSP's gapped (non-prelim): 1581
length of query: 320
length of database: 191,569,459
effective HSP length: 117
effective length of query: 203
effective length of database: 128,434,387
effective search space: 26072180561
effective search space used: 26072180561
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)